LOCUS       DATBNL010000001         3360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_39836, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000001 DATBNL010000000
VERSION     DATBNL010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3360
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39836"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1068)
                     /locus_tag="VIC30_00005"
     CDS             complement(<1..1068)
                     /locus_tag="VIC30_00005"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY7802808.1"
                     /translation="MRYLKLSLWGWIAVAIGLMLSVPVISIVASVFQEGQGNWAHLAS
                     TVLPTYIYNSLYLTATVGVGVTIIGVGCAWLVVMCQFPGRRLFEWALILPLAMPAYVV
                     AYAYTDVLQVAGPVQAWLREMTGWRFGEYWFPEIRSIGGAIGVFVMVLFPYVYLLARA
                     AFLEQSVATLEASRVLGKSPVGAFWKVALPMARPAIVVGVMLALMETLADFGTVFHFG
                     IQTFTTGIYRTWASMGDKVAAAQLSSVLLAFVAVLLVLERSSRHRAKYFESRSRYTSL
                     STYQLKGVRRWAAFIFCAIPLAGGFIAPVVMLLYMHITAGHDLTDPRYIAMIGNTVSL
                     AAVAAVLAVLVSLFLAFVARIE"
     gene            complement(1065..2093)
                     /locus_tag="VIC30_00010"
     CDS             complement(1065..2093)
                     /locus_tag="VIC30_00010"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7802809.1"
                     /translation="MSFGLHSIRLAFDGVPVINGVDLSAQSGATLCLLGPSGCGKTTL
                     LRILAGLEAPDAGTVTLGGKRVFGEGVNVPPEKRQVGYLFQDYALFPHLTVSQNVAFG
                     IQGWPNVEREVADLLASVNLSGFENAMPSTLSGGQQQRVALARALARRPQLMLLDEPF
                     SGLDTELKLQLRESTHRLLKEHGITAIIVTHDPEEAMYMADRIVLMSQGSIVQTGSPQ
                     ELYNQPINQFCARFLGDTLTVQGTNDGQTIHTSIGTFLAESGHPAGDVTVLVRPESLT
                     VQPGEGPYQVLHRHFVGSHTLVDLVDPQEHLPDLQVLVTTERSQALSAGQSVKLVSLQ
                     PHPLLVVT"
     gene            complement(2362..>3360)
                     /locus_tag="VIC30_00015"
     CDS             complement(2362..>3360)
                     /locus_tag="VIC30_00015"
                     /inference="COORDINATES: protein motif:HMM:NF019421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HEY7802810.1"
                     /translation="VGQSMIGRIQITRHGQSPSGLTPHESLARLIEQDTPRLVEHYLG
                     DRLSESGVSGGFMKFLAKSPFHADNTRPTLALANWIIKLNDDDHPNIVLLEYFGMMAA
                     RLAGLPVPEVHLASDHQHLLVRRFDVTPEGTHLGFEDFCALLGLPAREKFTSSVERMI
                     KTIDTFCQGENKADSLDQFFGHYLLASTMRNGDAHLKNFGLIYDQIQAPRLAPVYDML
                     SMSVYAPTLPNARDADDGMAINFQGSKRWLRAEMIETLATRCLVSKKRSRQWQEQIAA
                     ALVQTSELVLEHLSNYPDDNFTSQADRMLELWAIGLETFDTTAAHRVAKNRPQNQA"
BASE COUNT          832 a          887 c          919 g          722 t
ORIGIN      
        1 ttctattcga gccacaaatg ccaggaacag cgagacgagt acggctagca cagccgccac
       61 agcagccaga gagaccgtgt tgccaatcat ggcgatatat cgtggatcgg tgaggtcgtg
      121 tcctgctgtg atgtgcatgt aaagcaacat cacgactggt gcgataaaac cacctgccag
      181 aggtatggca caaaatataa acgctgccca gcggcgaacc cctttaagtt gataggtcga
      241 caggcttgtg tagcggctgc gtgattcaaa gtacttggct cggtgtcggc tgctgcgctc
      301 gagcaccagc agaaccgcca caaacgccag tagcacgctc gagagttgtg cggccgcgac
      361 tttgtcaccc atgctggccc aagtgcggta gatgcccgtc gtaaatgttt gaatcccgaa
      421 atgaaacacc gtgccaaagt cggccaacgt ttccatcagt gccagcatga cgccgaccac
      481 aatggctggt cgtgccatgg gtagagcgac cttccaaaac gccccgaccg gtgatttacc
      541 cagcacccgc gatgcttcta gtgtggcaac cgattgctcg agaaacgccg cacgcgccag
      601 cagatagacg tacggaaaca gcaccatcac aaacaccccg atggccccgc caatggatcg
      661 gatttccgga aaccaatact ccccaaaccg ccacccggtc atctcacgca gccacgcctg
      721 aacggggccg gcgacttgaa gcacatcggt gtaggcgtag gccaccacgt aggctggcat
      781 cgcaagcggc aggattaaag cccattcaaa taggcgtcgc ccaggaaact ggcacatcac
      841 cacaagccaa gcacagccca caccgatgat ggtgacgcca acgccaacgg tggctgtcag
      901 gtaaagactg ttgtagatat aggtcggtaa aaccgtgctg gccaaatgag cccagtttcc
      961 ctgaccctct tggaatacgc ttgccacaat actgattaca ggcacagaca gcatcaggcc
     1021 aatggcgact gcgatccagc cccacagact taacttcagg tatctcatgt cacaaccagc
     1081 agcgggtgcg gttgtaaaga aaccagcttg accgattgcc cagcgcttaa agcttgtgat
     1141 cgttcagttg tcaccagcac ctgaaggtct ggcaggtgtt cttgaggatc gaccaagtcc
     1201 accaaggtgt gcgagcctac aaagtgtcga tgtaagactt gatagggccc ttcgccgggt
     1261 tgtacggtta aggactctgg gcgaaccaat acggtaacgt caccggcagg gtgcccggac
     1321 tcagccaaga aggtaccaat agaagtgtga atggtttgcc catcattggt gccttggaca
     1381 gtgagcgtgt cacccaagaa ccgtgcacag aattgattga tcggttggtt gtagagctct
     1441 tgaggactgc ctgtttgcac aatgctgcct tggctcatca agacaattcg gtcggccatg
     1501 tacatggctt cttcgggatc gtgcgtcacg atgatcgctg tgatcccgtg ttcttttaaa
     1561 agacgatgcg tgctttcgcg taactgcagt ttcagttcgg tgtcgagccc ggaaaacggc
     1621 tcgtcaagca acattaattg tgggcgccta gcaagggcgc gcgccagcgc cacccgttgt
     1681 tgctggccgc cagacaaggt gcttggcatg gcgttctcaa agcccgacaa gttaacgctt
     1741 gccaatagat cagcgacttc gcgctcgacg tttggccatc cctgaatacc aaaggcgacg
     1801 ttttgtgaga cggttaaatg cgggaagagg gcgtagtcct gaaacaaata ccccacttgt
     1861 cttttttcag ggggtacgtt cacaccttcc ccaaaaacgc gcttgccgcc gagcgtcacg
     1921 gtgccggcat caggcgcttc aaggcctgcc agaatgcgca gtagcgtggt tttaccgcaa
     1981 ccagaggggc cgagaaggca gagggttgcg cctgactggg cagataaatc gaccccattg
     2041 atcacgggaa caccgtcaaa agccagacga atcgaatgca gtccaaatga cacgattagt
     2101 acctatggag ccccgtaaag tgatcgcaac gacctgaaag agaaggcgaa attaaacaca
     2161 aatcattatc aatacgttga gtttaacaga aggacccact aggctcagtg gggtggctca
     2221 gtgaagtagt tctatttttt aggttacccg aggcgacatc acctttcatg agcaccaaga
     2281 gaagaatcaa gcaaaggatc aagcaaagga tccagcaaag gatccagcaa aggatttgct
     2341 aagccgattt gagttcagaa tttacgcttg gttttgaggt ctatttttcg caacgcgatg
     2401 cgcagccgtg gtgtcgaagg tttctaagcc gatggcccaa agttcgagca tgcggtcagc
     2461 ctgggatgta aagttgtcgt cggggtagtt ggataggtgt tcaagcacca gttctgaggt
     2521 ctgtaccaag gcggcagcaa tttgttcttg ccattgtctg ctgcgctttt tgctgactag
     2581 gcagcgggtt gccagtgtct cgatcatctc ggctcttaac caacgcttgg agccctgaaa
     2641 attaatcgcc atgccatcgt cagcgtctcg tgcgttcggt agggtcggtg catacactga
     2701 catgctgagc atgtcataaa caggcgccaa acgtggcgcc tgaatctggt cgtaaatcag
     2761 gccaaagttc tttaaatgtg catcgccatt gcgcatggtt gaagccagca ggtagtggcc
     2821 gaaaaactga tccaaagagt ctgccttgtt ctcgccctgg caaaaggtgt cgatggtctt
     2881 aatcatgcgt tcaacggagc tagtgaattt ttctcgggcg ggcaacccaa gaagagcgca
     2941 gaaatcctca aaacccagat gagttccctc gggtgtgacg tcaaagcgcc tgaccagcag
     3001 gtgttggtgg tcacttgcaa gatgtacctc aggtactggc aatccagcta ggcgcgctgc
     3061 catcatgcca aagtactcta gcaaaacgat gttgggatga tcgtcatcat tgagtttaat
     3121 gatccagttc gcgagcgcca gcgtcgggcg cgtgttgtcc gcatgaaacg ggcttttagc
     3181 gagaaacttc ataaatccgc cggaaacacc ggactcgctc aggcgatcgc caagataatg
     3241 ttcaacgaga cggggcgtgt cttgttctat caagcgagcc agcgattcgt gtggtgtcag
     3301 ccctgatggg ctttgcccat ggcgcgtgat ttgaatacgc ccgatcatgc tttggccgac
//
LOCUS       DATBNL010000002         1675 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_9964, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000002 DATBNL010000000
VERSION     DATBNL010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9964"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VIC30_00020"
     CDS             complement(<1..278)
                     /locus_tag="VIC30_00020"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7802811.1"
                     /translation="MSDSLIPVKPESRLRGIAQSDLFYAFKRSPVAIVSAGVVLLLAL
                     AAIFAPLIAPTNPFDPSTLNLMNGFTPPMQPNAFTGDVFLLGTDDQGRG"
     gene            complement(278..1258)
                     /locus_tag="VIC30_00025"
     CDS             complement(278..1258)
                     /locus_tag="VIC30_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009461210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7802812.1"
                     /translation="MLAFIIRRVGQSILVLLIVGLVAFSMFRFVGDPIDNMLGQERTA
                     ADIERLRTQLGLDQPFVVQYYKFLESAVQGNFGISYRQGRPVADILLERAPATLELAM
                     VSGSLAILFGITLGVFTAIRRNGFLANTIMSASLIGVSLPTFLIGILLIYQFSVQLGW
                     LPSFGRGQTVDLGGWTTGFLTESGLKALILPSITLGLYQMTLIMRLVRSEMLEVLRQD
                     YIRFARARGLRARTVNFRHALKNTLVPVVTVIGLQLGSIIAFAIITETVFQWPGAGLL
                     FINAIQFVDIPIMAAYLMMISVLFVVINLLVDILYFFIDPRLRIERSGGH"
BASE COUNT          458 a          426 c          435 g          356 t
ORIGIN      
        1 cccctgcctt ggtcatcggt accaagcagg aatacatcgc cggtaaatgc attgggctgc
       61 atgggcggtg taaacccgtt catcaagttc agcgtcgagg ggtcaaaggg gttagtcggt
      121 gcaatgagtg gcgcaaatat cgctgccaac gcaagaagca aaaccacgcc tgccgatacg
      181 atggcaaccg gtgaacgctt aaatgcataa aacaagtcac tttgagcgat tccacgcagg
      241 cgcgattcgg gtttgaccgg gataagcgag tccgacatta gtggcctcct gatcgctcga
      301 tgcgcaagcg aggatcaata aagaagtaaa gaatatccac cagtagattg atcacaacaa
      361 agagcacgga gatcatcatc aagtaggcgg ccatgatcgg gatatctaca aactgaatcg
      421 cgttaatgaa taaaagtcca gcaccgggcc actggaaaac ggtctcggta ataatggcaa
      481 aagcaataat tgaaccaagc tgcagaccaa tgaccgtaac gacaggcacc aatgtgttct
      541 taagcgcatg acggaaattc actgtgcgcg ctctaagtcc gcgtgcgcgg gcgaaccgga
      601 tgtagtcctg tcgcagcact tctagcattt cagagcggac aagacgcatg ataagtgtca
      661 tctggtacag gccaagcgta atggacggca aaataagcgc ctttagcccg ctttctgtca
      721 gaaagcctgt ggtccagccc cctaagtcaa ccgtctgacc tctaccaaag ctaggtagcc
      781 aacccaactg taccgagaat tgataaatca gcaagatgcc gatcagaaaa gttggtaggg
      841 aaaccccaat tagcgaggcc gacatgatcg tgtttgccaa gaaaccattg cgtcggatcg
      901 ctgtaaaaac gccaagcgtg atgccgaaca aaattgctaa tgagcccgaa accatggcaa
      961 gttctaaggt cgctggcgct cgctccagaa ggatatcagc cacaggtcgc ccttgccgat
     1021 agcttatgcc gaaattgccc tgcacagcgc tttcgagaaa cttgtagtac tgcaccacga
     1081 agggctgatc aaggccgagt tgggtgcgca ggcgctcgat gtccgcggcg gtgcgctctt
     1141 ggcccagcat gttgtcgatc ggatcaccga caaaacgaaa catggaaaag gccaccagcc
     1201 caacgatgag caacaccagt atggattgtc caacgcgtcg aatgataaat gcgagcaaat
     1261 cgtcccctat gggcagtgcc agggggattc ataggtcccc acctctagcg cgctagtgta
     1321 cggtcattca cgcaaggtgt gaacaccatc gttgaccgtc gttcaaagca tccaccgatc
     1381 actacccggt gagaaaaatg gtcttgtatt cctggcatcg ggttgttcgg atgcgtcagt
     1441 cgcaatcctg tctaaccaat taatagcgct taattgtgtc tgtagatagt gattcttgca
     1501 gcaactggtt gcaaactgtt tgcaaccagt tcgcgaccgg cttgtaagtg caaacttggc
     1561 cggcaacccc taagtgtcag gtatcagatc accagattca ggtgcgcccc acaatgaggg
     1621 cgcacctgaa tgtttagtta atcgtgatgt atttcacttt tggttggtct tctga
//
LOCUS       DATBNL010000003         1842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29904, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000003 DATBNL010000000
VERSION     DATBNL010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29904"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..839
                     /locus_tag="VIC30_00030"
     CDS             <1..839
                     /locus_tag="VIC30_00030"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY7802813.1"
                     /translation="PPDTAVPYVTVMTDMADYPPHFWMEPGYTQHVVCGTEHACAQAI
                     AQGMATDRIHRVSGMMLSPRFYASVRHDSASDSASDSAGEMAAKRQQARQALGFEPDQ
                     AVGCVMFGGHGSSAMRRIATMLSDRPLILLCGRNEALQRSLKRLTAKAPHVVVGFTDD
                     VAHWMQLSDYFIGKPGPGSISEALHCGLPVIVTRNAWTMPQERFNTDWVREQGLGQVV
                     SSTAQIPEAVSEVIANLAPFHQAVAQLRNRALFEVVRTLEDIVTPTVCPQSLYAQAST
                     LE"
     gene            866..1144
                     /locus_tag="VIC30_00035"
     CDS             866..1144
                     /locus_tag="VIC30_00035"
                     /inference="COORDINATES: protein motif:HMM:NF027614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4936 family protein"
                     /protein_id="HEY7802814.1"
                     /translation="MHLFVYYKFVPSDYPGIESAARQLLAQIQEEVPSVKTQLLRRPD
                     VNDKGEHTWMETYECEAACFDGLKAAVEQFASQLPLPTARRVEVFLAV"
     gene            complement(1170..1748)
                     /locus_tag="VIC30_00040"
     CDS             complement(1170..1748)
                     /locus_tag="VIC30_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802815.1"
                     /translation="MDVAHVNTSGIDAQAIEQSSLAKASIIVVLCHDPINPIWDSVNF
                     DLVTRCREANPTAMFVAETVSDDNRQRLINAGANQVVRPIRSYPELLVRTLLAPGTEQ
                     VIEDLFDSQGEECVRYAVTYEGKWADLVTKLITADIGLALAYANEQGKVISNPPPHDT
                     INASALFVMVRESNTQAVQDVQALVAEPQSPS"
BASE COUNT          388 a          472 c          532 g          450 t
ORIGIN      
        1 ctccgccgga tacagccgtc ccctacgtga ctgtcatgac cgacatggcg gactacccgc
       61 cgcacttttg gatggagccc ggctacaccc agcatgtggt gtgtggcact gagcacgcct
      121 gcgcccaggc cattgcacag ggaatggcca cagaccgcat tcatcgggtg tcgggcatga
      181 tgctctcacc tcgattttat gcgtcggtgc gtcacgacag tgctagtgac agtgctagtg
      241 acagtgcggg tgagatggca gccaagcgcc aacaggcacg ccaagcgtta gggtttgaac
      301 ccgatcaggc ggtgggttgc gtgatgtttg gcggccatgg gtcaagcgcc atgcgtcgca
      361 ttgccaccat gctcagtgac cggccattga ttctgttatg tgggcgcaat gaggctttgc
      421 agcgcagtct aaagcgattg acagcaaaag ctccccacgt ggtggtgggg tttaccgatg
      481 atgtggcgca ctggatgcag ctgtctgact atttcattgg taagcctggc ccggggtcaa
      541 tcagtgaggc attgcattgt ggtttgcctg tgatcgtcac acgcaatgcc tggaccatgc
      601 cacaagagcg cttcaacacg gactgggtgc gtgagcaggg gttgggtcag gtggtgtcgt
      661 caacggccca aatccctgag gcagtcagtg aggtgattgc gaacttggcg ccgtttcacc
      721 aagcggttgc tcaactgcgt aatcgagcat tgtttgaggt tgtgcgtacg cttgaagata
      781 tcgtcacgcc aaccgtttgc ccacaatcgc tctatgcgca ggcgagtaca cttgagtaaa
      841 tggtgttgag ccaggtgaga ccgtcatgca tttatttgtc tactacaagt tcgttccatc
      901 cgattatccg ggcatcgagt ctgctgcccg tcagttgctc gcacagatcc aagaagaggt
      961 accgagcgtt aaaactcagt tactcaggcg tccggatgtc aatgacaagg gtgaacatac
     1021 ctggatggaa acctacgaat gtgaggctgc gtgttttgac gggctgaaag ctgcggtaga
     1081 acaatttgcc agtcaattgc cgctgccgac cgcgcgcagg gtcgaggtgt ttttggctgt
     1141 ttagtgtttg gctgtttgtt atctcgcgat tacgatgggc tctgcggttc tgcgactaac
     1201 gcctgtacgt cttgcacagc ttgggtgttg ctctctcgta ccatcacaaa taaagcgctg
     1261 gcattgattg tgtcgtgcgg tggtggatta gagataactt tgccttgctc gttggcataa
     1321 gctagggcaa ggccaatgtc agcggtgatg agtttagtga caagatctgc ccatttgcct
     1381 tcgtacgtca ctgcatagcg cacacactct tcgccttggc tgtcaaacaa atcctcaatc
     1441 acttgctcgg tacccggcgc tagcaaggtc ctgaccaata gctctggata gctacgaatc
     1501 ggcctgacca cttgattggc gcctgcgtta atcagccgct ggcgattgtc atctgacacg
     1561 gtttcagcca cgaacatggc agttgggttt gcctcacggc agcgagtcac caagtcaaag
     1621 ttcacactgt cccaaatcgg attgatcggg tcatgacaga gcaccacaat aatggatgcc
     1681 ttggctagac tagattgctc gatggcttgt gcatcaatgc cagaggtatt gacgtgcgcc
     1741 acatccatgg cacgctagct gtcaggtata ccctgactca tatatgaggt gacaataagc
     1801 aatggctttt gtcccgtggg caggctactg cgccgaagct gc
//
LOCUS       DATBNL010000004         2667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_49848, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000004 DATBNL010000000
VERSION     DATBNL010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49848"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VIC30_00045"
     CDS             <1..194
                     /locus_tag="VIC30_00045"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014427204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY7802816.1"
                     /translation="RADYLGNLEYTLTATNFNPILALAADTVIAEPKTIMPVGVIPPD
                     HVMTPGPLVDYLVAHPVKK"
     gene            225..878
                     /locus_tag="VIC30_00050"
     CDS             225..878
                     /locus_tag="VIC30_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEY7802817.1"
                     /translation="MDATEVIQRRIAREITTGMLVNLGIGIPTGVTRFVTAEGVMFQS
                     ENGLIGTGAPMPEGMEDESLVDAGGGFVSAVPGAATIDSAMSFALIRGGHLDMTVLGG
                     MQVNQQGQLANWMVPGKRVAGMGGAMDLVSGAKRVIVAMKHTAKGAAKIVKACTLPLT
                     SIRQVSLIVTDLAVIEPTDQGLVLVEHADGVSVEDILAQTDANLMVSANIRPMGLLG"
     gene            917..1945
                     /locus_tag="VIC30_00055"
     CDS             917..1945
                     /locus_tag="VIC30_00055"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HEY7802818.1"
                     /translation="MRVNKHDEIAARDPAHPESSVLASKAYIPGEPPRDVAIDEIGKV
                     LLNPDAIIWVGLHFPDEAQVGEVLDQLGVGHDALHGLVGDLSMPRMSVHEKDLLIVLP
                     TVLWKSDHSRPLFGRLACLVGHRFLITVRRGSSLPHLHLRDQLEKNRSLLDAGTDHIT
                     AEIIDDLVDRYVEAYKHFEVRVDRTERVLMRASFDRASIQKLYVMRRDFHRFQVAIEP
                     IGEICARLARLKTKSLSPTARMRFDGLSERIQRLDALFSNLGDGLAFAFEAGALIEQA
                     RQTDTTRKLAAWAAIISIPTAVAGIYGMNFEYLPELKWKYGYFAVLGLMATTCTTLYV
                     LFRRSKWL"
     gene            complement(2112..>2667)
                     /locus_tag="VIC30_00060"
     CDS             complement(2112..>2667)
                     /locus_tag="VIC30_00060"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7802819.1"
                     /translation="TILAATIGAKSDHPRNVTEIIHNDILAAKGAALLDVLLVVGILF
                     AILFSDKVGRIKLQIFGFIGCAVGLGLAALSLSVQGGAEMWLLFGGFMLFNFMTNLGP
                     NAQTYLIAGEVFPTKIRGRGAGFAASFAKVGAVLTAFLFPILLKDIGTQALLVILIIA
                     SLIGAVVTFIYRIETAGKSLEDMD"
BASE COUNT          612 a          681 c          751 g          623 t
ORIGIN      
        1 agcgcgctga ctacttgggc aacctcgagt acaccttaac ggccacaaac ttcaatccca
       61 tcctcgcgtt ggcagccgac acagtcatcg ctgaacccaa gaccattatg ccggttggcg
      121 tgattccacc agaccatgtc atgacacctg gtccattggt ggactatcta gtcgcccatc
      181 ctgtaaagaa gtaggagaga aagatgaatg cttcaacaat attgatggac gccactgagg
      241 tgatccaacg tcgtattgcc cgcgagatca caaccggcat gctagttaat ttgggtattg
      301 gtattccgac tggggtgacg cgattcgtga ccgcagaggg cgtgatgttt cagtcagaga
      361 acggcctgat cgggaccgga gccccgatgc ccgagggtat ggaagacgaa tcgctcgtgg
      421 acgcaggtgg cggttttgtg tcggcagtgc caggtgcggc aacaattgac tcggccatgt
      481 catttgcctt gattcgaggt gggcatctgg acatgactgt gcttggtggc atgcaggtca
      541 atcagcaagg gcagctcgcc aactggatgg tgcccggtaa gcgggtcgct ggcatgggtg
      601 gtgcgatgga tctggtgtca ggcgctaaac gggtgatcgt ggcaatgaaa cacacagcca
      661 aaggagcggc aaaaattgtc aaagcttgca cactacccct gacatccatc cggcaggtat
      721 cgctgattgt cacggatttg gccgttatcg agccgacaga ccaaggcttg gttctggtag
      781 aacacgctga tggcgtatcg gtcgaggaca tattggcgca aactgacgct aacctaatgg
      841 tgtccgctaa tattcgcccc atgggtcttt tggggtaagg tagcgatcat gtcgaagttt
      901 catttcggtg atcagcatgc gggttaataa acatgacgaa atagcagcac gggatccagc
      961 tcaccctgaa tcgtctgtgc ttgcgtccaa agcttatatt cctggggagc caccacggga
     1021 cgtcgccatt gacgaaatcg ggaaagtgct ccttaatccg gacgccatta tctgggtggg
     1081 cttgcacttt cctgacgaag cacaagtcgg ggaggttctg gatcagcttg gcgtcgggca
     1141 tgacgccttg cacggtctgg tcggcgattt gtccatgcct cgcatgtcgg tgcacgagaa
     1201 agatctgctg atcgtgctgc caaccgtgtt gtggaaatct gaccacagca gaccattgtt
     1261 tggaaggctg gcttgcctgg tggggcatcg gttcctaatc acggtcaggc gcggctcatc
     1321 tttgccacac ctacatctgc gcgatcagct agaaaagaac cgtagtctgc tagatgcagg
     1381 cactgatcac atcacagcag aaatcattga tgatctggtg gatcgttatg ttgaggccta
     1441 taagcacttt gaggtgcggg ttgatcgaac cgagcgcgtg ctgatgcgcg cttcatttga
     1501 ccgggcatcc attcaaaagc tctatgtgat gcggcgtgat ttccaccgat ttcaggtggc
     1561 tattgagccc atcggtgaga tttgcgcccg actagcgcgt ttaaagacca agtcattaag
     1621 tccgaccgct cgaatgcggt ttgatggtct gtcggaacga atacaacggc tcgacgcctt
     1681 attttcaaat cttggcgacg gattggcgtt tgcgtttgaa gctggcgcct tgattgagca
     1741 agctcggcaa accgacacaa cccgcaaact tgctgcctgg gcggcgatca tttcgatacc
     1801 gactgcagtg gctggcatct atggtatgaa ctttgagtac ctgcccgagt tgaaatggaa
     1861 atatggctac tttgctgtgt tgggtttgat ggcgacgact tgcacaacct tgtacgtctt
     1921 attccgtcgc tcgaaatggt tgtagtctga gctttagcgc cctgacaccg agttcaccga
     1981 caccgagtta attcagtgtg attgattctt taagaacatc gcccgccagg ttctgagccg
     2041 gcgggcgatg tgtttgggct tcttggtgtg tggcgcaccg tggtccattg accacggcgc
     2101 ttccgtattc ttcagtccat atcttcaagg cttttgccag ccgtctcgat tctatatatg
     2161 aacgtcacca ctgcaccgat cagtgaagcg atgatgagga taaccaagag cgcctgcgtg
     2221 ccgatgtcct tgagcaggat agggaaaagg aacgcggtca gcaccgcccc gaccttggca
     2281 aacgatgccg caaaacccgc cccacgccca cgaatcttgg tggggaagac ctcgcctgcg
     2341 atcaggtacg tttgtgcgtt tggccctaag ttggtcatga agttaaacaa catgaagcca
     2401 ccaaagagca accacatctc agcgccaccc tgtacgctca gtgacaacgc ggctagtccc
     2461 aagcccacgg cacaaccaat aaagccaaag atctgcagtt tgatccggcc gaccttgtca
     2521 gagaacaaaa tggcaaacaa aatgccgacc acaaggagca cgtcgagtaa agccgcgcct
     2581 tttgccgcca aaatgtcgtt gtggatgatc tccgtgacat tgcgtggatg atcggatttc
     2641 gcgccgatgg tggcagcaag aatggtt
//
LOCUS       DATBNL010000005         2683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_119535, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000005 DATBNL010000000
VERSION     DATBNL010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119535"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..952)
                     /gene="istA"
                     /locus_tag="VIC30_00065"
     CDS             complement(<1..952)
                     /gene="istA"
                     /locus_tag="VIC30_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012080643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEY7802820.1"
                     /translation="MDMLGKVRRMHLRDKLSISEIAKRTGLSRNTIKKWLRAPGDLEP
                     KYRRKPEDTKLSAFEPFLRAALKADRLRHKDSRRTARALFHQIKAQGYEGGYSRVTDF
                     IRATREAEGRDSRAFVPLTFENGEAFQFDWGEEGMLVGGVFHEVQVGHMKLCASRAFF
                     LVAYPTQSHEMLFDAHTRSFAAFGGIPKRGIYDNMKTAVDKVGSGKNRKVNKRFKAMC
                     SHYLFDPDFCNRAAGWEKGIVEKNVQDSRRRIWLEAREKRFGSFVELNDWLTTRCLDT
                     WHEVKHPEYTELTIAEALEIEREHLMPVPEPFDGYVEKTSR"
     gene            complement(1326..1820)
                     /locus_tag="VIC30_00070"
     CDS             complement(1326..1820)
                     /locus_tag="VIC30_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020700826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802821.1"
                     /translation="MTVSVLLDTSYLITLIDQNRPHHDTAAKFYRLMLEEQISMYFSV
                     IAAAEFAIKQPITDLPLRNFRCIPFNLAHSTESARLWNALGSRDKGDSRVVVRDDVKL
                     LGQATHESIPLILTEDASTLFKYCDRLRLAGVCSVRPIKLADGYDPSALRSDGQRELT
                     LDDD"
     gene            complement(1817..>2683)
                     /locus_tag="VIC30_00075"
     CDS             complement(1817..>2683)
                     /locus_tag="VIC30_00075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802822.1"
                     /translation="VTRTYVHASQSDTARLGWLTPKHIQPTIQVMETLNELRFAISDR
                     LNDGEVGPKHVPLNLLGDFQKDVTEFLRGSVRDIDASDVIVAIEEGSLALVASGLLAT
                     ATLWADLDRLKSSGSLNQIDPKRAAVIERWQAASHQNPHRKYRIAVPSAANTGVSIDS
                     ETNFRRDEEVWVTVEKYIHGWVLDWGGKTKPNVHLELDDGTVLKVAASQTLLKQEKQN
                     LLYRPTLLHITAQENLFTGALRNPTLLAFETNQPSYDEAEFQEMVKRGTAAWADTPNA
                     TQWLEDLRGGRA"
BASE COUNT          607 a          735 c          667 g          674 t
ORIGIN      
        1 cccttgaggt cttctccaca tacccgtcaa agggctcggg cacgggcatc aggtgctcgc
       61 gttcaatctc caatgcttcg gcgatggtga gctcggtgta ctcagggtgc ttgacctcat
      121 gccacgtatc caagcaacgg gtggtaagcc aatcgtttaa ctccacaaag gagccaaacc
      181 gcttctcccg tgcctctagc cagatacgcc gacgactgtc ctgcacgttc ttctcaacaa
      241 tgcctttctc ccagccagcg gcacggttac agaagtcggg gtcaaacagg taatggctgc
      301 acatggcttt aaaccgctta ttgaccttgc ggttcttgcc cgaaccaacc ttgtcgaccg
      361 ccgtcttcat gttgtcgtag atgccacgct tggggatgcc accaaaggca gcaaaggacc
      421 gggtgtgtgc atcaaagagc atctcatggc tctgagtcgg ataagccacc aggaagaacg
      481 cacgactggc acacagcttc atatgcccca cctgcacttc atgaaacacg ccaccgacca
      541 gcatgccttc ctcgccccag tcaaactgga acgcttcacc attctcgaag gtcagtggca
      601 caaaggctct actatcccga ccctcagcct cacgcgtggc ccgaataaaa tccgtcaccc
      661 ggctgtagcc accctcgtag ccctgagcct tgatctgatg aaataaggct ctggccgtgc
      721 gccttgagtc tttgtgtcgt aggcgatcgg cttttaacgc cgctcgcaga aagggctcaa
      781 aggcagagag ctttgtgtcc tcgggctttc gcctgtactt cggctccaag tcgcccgggg
      841 cgcgaagcca cttcttgatc gtgttgcgcg ataaacccgt gcgcttggcg atctcgctaa
      901 ttgataattt gtcgcgcaaa tgcatgcgcc tgaccttgcc taacatgtcc atggtgatca
      961 cctccaaact cctgcttaaa aagtaagcag gtcgattgaa caccctggtc aattttcagt
     1021 cggcacaacc cttaaaaact ggtcaatttt cggtcggcgt caacaatgca ggtcaaattg
     1081 gtcttgtatg cccgtttttg acatggtgtc gattttgccg tcacatcagg gtttgttgat
     1141 gtggtcggcc accgcgcagt cgacgctgtg gtcagtgatc tctgacccaa ttctcaacgt
     1201 tgatgtgtcg ctacgtttac caacggtgtc aacagggtgc aacagcgaca attttaaaaa
     1261 gtagattgga taccatccgg ttgctctgca accaacctca gcatggcttg ggtcagcgtt
     1321 ggggtctagt cgtcatctag agtcaattct cgttgcccat ccgaccgtaa agcactaggg
     1381 tcataaccgt ctgcgagttt gatgggacgt actgagcata cgccagcgag tcgcagacga
     1441 tcacaatatt taaaaagagt cgacgcatct tctgtcagaa tcaacggaat ggactcgtga
     1501 gtggcctgac ctagcagttt cacgtcatct cgcaccacaa ctctactatc acctttatca
     1561 cgcgacccaa gtgcattcca tagcctcgct gactcggttg aatgagcgag attgaatggg
     1621 atgcagcgga aattcctcag cggtaggtca gtaatcggct gcttgatagc aaactccgcg
     1681 gcagcgatca cagagaaata catcgagatc tgctcttcga gcattagccg gtaaaacttg
     1741 gcggccgtgt cgtggtgcgg gcggttctga tcgattaatg tgattagata gctggtatcg
     1801 agcagaactg acaccgtcat gctcgccctc cacgcaagtc ctctaaccat tgtgttgcat
     1861 tcggggtgtc tgcccatgca gctgtgccgc gtttaaccat ttcttgaaac tcagcctcgt
     1921 catagcttgg ttggtttgtt tcaaatgcca gtaatgtcgg attgcgcagg gcgcccgtaa
     1981 aaaggttctc ctgagctgtg atgtgaagca gtgtgggtct gtacagcagg ttttgctttt
     2041 cttgcttgag tagtgtttgg ctagccgcga ctttcaagac cgtaccgtca tccaattcta
     2101 aatggacatt aggtttggtt ttgccacccc aatcgagcac ccagccatgg atgtactttt
     2161 cgacagttac ccagacctct tcatctctac ggaaatttgt ttctgaatca atcgacactc
     2221 cggtatttgc agcactcggg acggcaatcc gatacttgcg atgtgggttc tgatgcgatg
     2281 ctgcttgcca gcgttcgatc actgcagcac gcttggggtc aatttgatta agactgccag
     2341 acgacttcag gcggtcaaga tcggcccaga gcgtggctgt tgccaacaaa ccggaagcca
     2401 ctaaagctaa tgagccttcc tcaatagcga cgattacgtc actggcatcg atgtctctaa
     2461 ctgacccacg tagaaattcg gtaacatcct tttgaaagtc acccaacaga ttcaaaggca
     2521 cgtgcttagg cccgacctct ccatcgttca gacggtcgct gattgcaaag cgtagctcgt
     2581 tcaatgtctc catgacttga attgtaggtt gaatatgttt cggtgtcagc cacccgagtc
     2641 ttgcggtgtc cgactggctc gcgtgaacat aagttcgagt tac
//
LOCUS       DATBNL010000006         1811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10108, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000006 DATBNL010000000
VERSION     DATBNL010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10108"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VIC30_00080"
     CDS             complement(<1..357)
                     /locus_tag="VIC30_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019921443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEY7802823.1"
                     /translation="MPKTAKALLQLPPSTAAAIEKLGADLAVARLRRKESLQSWAKRM
                     GVSVPTLLRLEGGDPSVSIGIVATALWLVSRDADLADLAAPEHDRGAIERDVKAAVAL
                     GKARAKASAKARLKSKS"
     gene            complement(588..>1811)
                     /locus_tag="VIC30_00085"
     CDS             complement(588..>1811)
                     /locus_tag="VIC30_00085"
                     /inference="COORDINATES: protein motif:HMM:NF021349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7802824.1"
                     /translation="RQRLDVKLDRETDIAGEFSALIRDVHKRHGQRPVVLIDEYVKPI
                     LDNILDPDRARELREGLKNFYSILKGADPDLRFVMLTGVSKFSKVSLFSGLNNLNDIT
                     LDVPYATICGYTDVDIDSVFAPELDGLDRQMIRTWYNGYRWGGQDVTAIYNPFDVLLL
                     LQKRQFGPYWFESATPGFLVDVLKQRGIFTPELDRWETEYELINQFDVDDMTTEGLLF
                     QTGYLTIKSIEEPMVGYRQFTLGFPNREVEASLNYALLPALGLAHEPRQRKTLFKHLQ
                     QHDLKGLETHLRALFAGLPHDWYRNNPIARYEGHYASVFYSHFAALGLNVTVEDASHL
                     GSVDMSVDFDGHIYLFEFKVIEQSTPGAALAQIQQKRYADQYLSSGKTIHLIGVEFSS
                     AQRQIEAFDVLTLAS"
BASE COUNT          457 a          490 c          450 g          414 t
ORIGIN      
        1 gcttttagat ttcaaacgtg ccttggctga ggcctttgcc cgagctttgc ccagtgcaac
       61 agccgcttta acgtcgcgct caatagcgcc acggtcatgc tcaggtgctg ccaagtcggc
      121 caagtccgcg tcccgactga ctaaccaaag cgctgtggcc acaatcccaa tactcacact
      181 ggggtcgcca ccctcgagcc ttagcaaagt tggcacagaa acacccatac gtttggccca
      241 ggactgtaag gactccttgc ggcgcaggcg agccacggcc aggtccgcac ccagcttttc
      301 tatggcagct gcggtagaag gcggtagttg caacaaggct tttgcggttt taggcataat
      361 atagatatta acaaaaaatt acacattaca aatatctata ttagtttctg gtcgttcaat
      421 acagctaact caagcggcac cgacaatcga cacgacccat ggtggcccga atggtggcga
      481 gctcgagcgc cagcacagct gcctcgctgc aatgcctagg tgcaacttgg tgaatgtgta
      541 ccagctcatc acacgctcgg ggccctagat caattggtgc gaaggttcta ggacgccaac
      601 gtcaacacat caaaggcttc gatctggcgc tgcgcactag aaaactcaac accaatcaag
      661 tgaatggttt tgccgctcga tagatactga tcggcgtagc gcttctgttg aatttgcgcc
      721 aatgctgcac caggtgtgga ctgctcgatg accttgaact caaacagata gatatgccca
      781 tcaaaatcca cgctcatgtc gacactaccg agatggctcg cgtcttcgac cgtgacatta
      841 agaccaagtg ctgcaaaatg gctgtagaag acactagcgt agtgtccctc atatcgtgcg
      901 atgggattat tgcgatacca gtcgtgtggc aagcctgcaa agagtgcccg cagatgagtc
      961 tcgaggcctt ttaggtcatg ttgttgaaga tgcttaaaga gcgttttacg ttgcctgggc
     1021 tcatgcgcca atccaagtgc cggcaacaac gcataattta agcttgcctc gacttcgcgg
     1081 ttgggaaagc ccagcgtgaa ctggcgataa ccgaccatgg gctcttcgat cgacttgatg
     1141 gtgagatagc cggtctgaaa gagcaagcct tctgtggtca tatcatcaac atcaaactga
     1201 ttgatgagtt catactcagt ttcccagcgg tcaagctctg gcgtgaagat gccacgctgc
     1261 ttcaacacat caaccaaaaa acctggcgta gctgactcga accaatatgg accgaattgc
     1321 cgcttttgca gcagcagcaa aacgtcaaac ggattgtaga tggcggtgac atcttgcccg
     1381 ccccagcgat agccgttgta ccaggtgcgg atcatttgtc ggtctagtcc atcaagctct
     1441 ggcgcaaaaa ccgaatcgat gtccacatcg gtgtaaccac agatcgttgc ataggggaca
     1501 tcaagcgtga tgtcattcaa attgtttagc ccagagaaaa ggctaacctt gctgaacttg
     1561 gagactcccg tgagcatcac gaaacgcaag tctggatcag ccccctttag tatgctatag
     1621 aagtttttca agccctctcg caactcgcgc gcgcgatctg ggtccagaat attatccaga
     1681 atcggcttga catattcgtc tatcagcacc acgggacgct gcccatgtcg cttgtgcaca
     1741 tcacgaatca gtgctgagaa ctcgccagcg atgtccgtct cacgatcaag cttgacatcg
     1801 agacgctgac g
//
LOCUS       DATBNL010000007         2841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_159419, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000007 DATBNL010000000
VERSION     DATBNL010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159419"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..146)
                     /locus_tag="VIC30_00090"
     CDS             complement(<1..146)
                     /locus_tag="VIC30_00090"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7802825.1"
                     /translation="MNPDQSTCLQGRRALVTGGNSGIGQAIALALGRAGARVVLVARR
                     ATEL"
     gene            complement(152..1465)
                     /gene="hisD"
                     /locus_tag="VIC30_00095"
     CDS             complement(152..1465)
                     /gene="hisD"
                     /locus_tag="VIC30_00095"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009522571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY7802826.1"
                     /translation="MMITYLKKATKTPETETGTAQTVVTEMLAEIEKNGEQAVLDYAK
                     KLDKWDGNPIVTKAQIAEVAATMPADVKRDIDFAIKQVYDFACAQRDSIRDFDVELHS
                     GVTAGQKVLPVNVAGCYAPAGRYAHIASAYMGVTTAKAAGVKTIIACSGPFRGGPMHP
                     YLMYAFDKAGADVIMTLGGVQAIATMAYGLFTGKPADVIVGPGNKFVAEAKRTLFGKV
                     GIDVFAGPSEVAVIADETADPAIVASDLVGQAEHGHESPAWLFTTSEVLAKEVMRLVP
                     ELIDTLPPTAKDAAGSAWRDYGEVIVCGTREEMAEISDKYASEHLEVHCKDLDWWLAN
                     LTCYGSLFVGEETTVAYGDKCSGPNHVLPTKGAGRYSGGLSVHKFMKTLTWQRMTREA
                     ARDLGEVTARISRLEGMEAHARTADDRLAKYFPDATFDRGTPVEV"
     gene            complement(1505..>2841)
                     /locus_tag="VIC30_00100"
     CDS             complement(1505..>2841)
                     /locus_tag="VIC30_00100"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY7802827.1"
                     /translation="NYLNPGFLDQSTTLGWSFYGPVLLFVLLIALGVPVWVAIGAASI
                     GLLLWSGVLPMSLFGGSLFEGIDAFALTAVPLFILTGDVLVRTGLSRKFMDIAEALTN
                     WTRSGFGSATVLVCGMFSAISGSDAAGAAAVGRMTINRLVESGYPRPYACALVAAGAC
                     TGILIPPSIAYIVIGLVLGISASTLFQAALIPGLLILTGIFITNSWINRRYAYEANVA
                     ITGKAWLANVGQALKRGWYAFLVPGVIFAGIFSGNLTPTEAGATAVVITIIIGFVIGT
                     LKLADFPAMLVSSAKVNGVILPIIAFSLPMAEALAVMGVPQSFVAAVTSLSEEPYVII
                     LLMIAILVAAGCVMETTPNIVILAPILKPLADQIGMNEIQFCVMMITTLGVGFITPPL
                     GLNLFVVSGLTGESILRIAKQALPFALSMLLVVLLIAFVPEVTTALLPDIYK"
BASE COUNT          722 a          761 c          747 g          611 t
ORIGIN      
        1 tgcagttcag tcgctcgacg ggccacgagc accacccgag cgccagcccg accaagcgct
       61 aaggcgatgg cctggccgat acccgagttg ccaccggtca ctagtgcccg gcgcccttga
      121 agacaggtcg attgatcggg gttcattgcc ttcaaacctc tacgggtgtg ccacggtcaa
      181 atgtcgcatc agggaagtat tttgctagtc tgtcgtccgc cgttcgagca tgggcttcca
      241 taccttcaag acgggaaata cgagctgtca cttcaccgag gtcacgggca gcctctcgcg
      301 tcatccgctg ccaagtaagg gttttcatga acttgtgaac cgacagacca ccagagtaac
      361 gacctgcgcc cttggttggc aacacatgat tgggaccact gcatttgtca ccataagcca
      421 cggtggtttc ttcaccgaca aacagcgaac cgtagcaggt aaggttagct aaccaccagt
      481 ctagatcttt gcagtgaacc tcaaggtgct ctgacgcata tttgtctgag atctcagcca
      541 tctcttctcg cgtaccgcag acgatgactt caccatagtc gcgccaagcc gagccagcgg
      601 catctttggc cgttggtggc aaagtgtcaa ttaattcggg caccagtcgc atcacttcct
      661 tggcaagaac ctcactggtt gtaaacaacc aagcaggcga ttcgtgaccg tgttcggcct
      721 gcccgactag atcgctggca acaatagcgg gatctgccgt ttcatcggcg atgacagcga
      781 cttcggatgg accagcaaac acgtcaatgc ccactttgcc gaacagcgta cgtttggctt
      841 cagcgacaaa cttgttgcca gggccaacaa tgacgtcagc cggtttgcct gtgaataaac
      901 cataagccat ggtcgcaatc gcttgcacgc cacctaaggt catgatcaca tcagcgccag
      961 ccttgtcaaa ggcatacatc aggtacggat gcatggggcc gccccggaaa gggcctgagc
     1021 aagcgatgat ggttttaacg ccagcggctt tggcagtcgt gacgcccatg taggctgatg
     1081 cgatgtgtgc atagcgacca gccggggcat agcaaccagc cacattcact ggcagtactt
     1141 tttgaccggc ggttacaccg ctgtgtaact ccacatcaaa atcacgaatg gaatcacgct
     1201 gggcgcaggc aaaatcatag acttgcttga tagcaaagtc gatgtcgcgt ttgacatcag
     1261 cgggcatggt tgcagcgact tcagcgatct gtgctttggt cacgatcggg ttgccatccc
     1321 acttgtcgag ctttttagcg taatcaagga cggcttgttc accgttcttt tctatttcag
     1381 ccagcatttc cgtgacgaca gtttgggctg tgccggtttc tgtctcaggt gttttagtgg
     1441 cttttttgag gtaggtaatc atgattgctc cgaaatagtt gagtcaggta gttgtgtcgt
     1501 tgaattattt gtaaatgtcg ggtaacagtg ctgttgttac ttctggcacg aaggcaatca
     1561 gcaacaccac gagcagcatg gatagtgcga acggtagggc ttgtttggcg atgcgcagaa
     1621 tggattcgcc agttaacccc gacaccacga ataggttcag tcctaatggc ggggtgataa
     1681 agccaacgcc caatgtggtg atcatcatca cgcaaaactg gatctcgttc atgccaatct
     1741 ggtcagcgag cggcttcaga attggggcaa gaatgacaat gttcggcgtg gtttccatga
     1801 cgcaaccggc tgctaccaag atcgcaatca tcaacaaaat gatgacgtac ggctcttcgg
     1861 acaaactggt gactgctgct acaaagcttt gcggcacacc catgacggct aatgcctctg
     1921 ccatcggtaa agaaaacgcg atgatcggca agatgacgcc attgactttg gctgaactaa
     1981 ctagcatcgc tggaaagtct gccagtttca aagtaccaat aacaaaacca atgatgatgg
     2041 taatgacaac agcagttgca ccagcttcag tgggtgtcag gttcccggaa aaaatgccgg
     2101 caaatatgac gcccggcact aaaaacgcat accaaccgcg tttcagggcc tgcccaacgt
     2161 tagccaacca agccttgcca gtgatagcta cattggcttc ataggcgtag cgtcggttga
     2221 tccaactgtt ggtaataaaa atacctgtca gaatcagtag gcctggtatg agcgcggctt
     2281 gaaacaaagt tgaggcagaa atgcccaaga ccaaaccaat cacgatgtag gcaatcgatg
     2341 gtgggatcaa gatgccggtg caagcgccgg ccgcgaccaa tgcgcaggca tatgggcggg
     2401 ggtagccgga ctcaaccaaa cgattgatgg tcatgcgacc aacggctgca gcaccggctg
     2461 catctgatcc ggagatggcg ctaaacatgc cgcagaccag gacagttgcc gaaccgaatc
     2521 cactacgcgt ccaattggtc agcgcctctg caatgtccat gaatttacgg cttaagccag
     2581 tgcgcacgag cacgtcgcct gtcaggatga acagcggcac ggcggttaag gcaaaagcgt
     2641 caatgccttc aaacagtgag ccgccaaaaa gcgacatcgg caatacgcct gaccacaaca
     2701 acagtccgat cgatgccgca ccaatggcca cccagacggg tacgccaagt gcgattaaaa
     2761 gcacaaacag tagaacggga ccgtaaaagc tccaaccaag cgtcgtgctc tgatccaaga
     2821 accctggatt gagataattc a
//
LOCUS       DATBNL010000008         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29981, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000008 DATBNL010000000
VERSION     DATBNL010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29981"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1542
                     /locus_tag="VIC30_00105"
     CDS             <1..1542
                     /locus_tag="VIC30_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013723040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7802828.1"
                     /translation="CLIEAGPADKSPYIHIPAGFIKAGHDPRYTWDFQTEPTEQTLGR
                     RVVTRMGRTLGGSSSINGFNYTRGIASDYDHWASLGNPGWSYADVLPYFKRSEQRIGD
                     HDPTYRGTRGALPITDCEWRHPLCDAFIQGAAEFGLPAHIDYNAASQRGAGYYQRWIQ
                     KGRRISAAQAFLKPVMRRPNLQVLTQAQVLSITFEGKIATGVKYRRPGTNEIHTIGAR
                     LEVILSAGAGNTPKLLQLSGVGPAHLLREFGIVPVCDLNGVGENFQDHFMVRSVVRVQ
                     NVKTLNSMARGLPLLGQIARWLIGKPSILGISPSVCFAFERSSPDIEHPDLQFHFSPG
                     SYAAGIAGKLDDFEGMTLGVYHTRPNSRGSVKIQSPDPNHLPLIQPNYLAATADQQVI
                     VKALRLARSYLHSEALSPYIERDDFPAATDVTDEALLACARARGGTAWHFMGTCRMGP
                     DSDPCAVVDASLRVRGVQNLRVADASIMPTMPSGNTGAPTMMIAEKASDMILGRTPLS
                     PAAFD"
     gene            1579..>2092
                     /locus_tag="VIC30_00110"
     CDS             1579..>2092
                     /locus_tag="VIC30_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7802829.1"
                     /translation="MFEDITMKDRRVLITAGASGIGLEIARTFASAGCHVMICDIDDA
                     ALEAANQALPSVSTVHADVADEADVQKLFTHVKDTLGGLDVLINNAGIAGPTGGVETL
                     SKAHWDQTLAVNITSQFLCARQAVPMLKESAHGVMLNLSSAAGHLGFAGRSPYSASKW
                     AVVGFTKSLAL"
BASE COUNT          476 a          605 c          557 g          454 t
ORIGIN      
        1 tgtttgattg aggctggacc agccgataaa agtccatata tccacatacc ggcgggattc
       61 atcaaggctg ggcatgaccc gcgctacaca tgggactttc agacagaacc caccgagcag
      121 acccttgggc gtcgggtcgt cacacgcatg gggcgcaccc tcggcggatc aagttccatt
      181 aatggtttca actacacacg cggtatcgcc tcagattatg accactgggc aagtctgggc
      241 aaccctggct ggtcttacgc tgatgtattg ccttatttca agcgcagtga acagcgcatc
      301 ggtgatcatg acccgacata ccgtggcaca cgtggcgcgt tacccatcac cgactgtgaa
      361 tggcgacacc ccctttgtga tgccttcatt caaggtgcgg ctgagtttgg cttgccagcc
      421 cacatcgact ataacgcggc ctcacaaaga ggcgccggct actaccaacg ctggatacaa
      481 aagggtcgac gcataagtgc ggcacaagcc tttctcaaac cagtcatgcg acgaccgaac
      541 ctgcaagtgc tcacgcaagc acaggtattg tcgattacct ttgagggcaa aatcgccacc
      601 ggcgtcaaat acagacgccc cggtactaac gagatacata ccattggcgc taggctcgag
      661 gttattctga gcgccggtgc tggcaacacc ccgaaattgc tgcaactatc aggcgttggg
      721 ccagcacacc tgctaagaga gttcggcatc gtaccggttt gcgaccttaa tggtgtggga
      781 gaaaacttcc aagaccactt tatggtccga tcagtggtgc gagtccagaa cgtcaaaaca
      841 ttgaattcca tggcgcgtgg cttgccttta ctgggtcaga tcgcgcgctg gcttattggc
      901 aaacccagta ttcttggtat cagcccatct gtgtgctttg cgttcgaacg gtccagcccc
      961 gacatcgagc acccggacct acaatttcat ttctcacctg gcagttatgc cgcagggatt
     1021 gctggcaaac tagacgactt tgaggggatg acactcggtg tctatcacac acgcccaaat
     1081 agccgagggt ccgtcaaaat ccagtcaccc gacccaaatc acttaccgtt aatccagccc
     1141 aactatctcg ctgctaccgc tgatcaacag gtcatcgtca aagcgctacg tctggcccgc
     1201 tcttacctgc atagcgaggc cttatcaccg tacattgaac gcgatgattt tccggcggcc
     1261 actgatgtca ccgatgaagc tttgctggcg tgcgcgcgtg cgcgcggtgg caccgcgtgg
     1321 cactttatgg ggacctgtcg gatgggacct gacagtgacc cgtgtgccgt cgttgacgca
     1381 tccttacgag tccggggcgt acaaaacctg cgggtagctg atgcctccat catgcccacc
     1441 atgccatcag gcaacaccgg agcgcccaca atgatgatcg ccgaaaaagc gtcagacatg
     1501 attttgggcc gaacaccgtt gtcaccggcg gcattcgatt aagcttaaaa gactcgctta
     1561 acaacagaag ggttggccat gtttgaagac atcaccatga aagatcggcg tgtgctgatc
     1621 actgccggtg ccagtggtat cggacttgaa atcgcgcgca cgttcgcctc agcaggctgt
     1681 catgtcatga tttgtgacat tgacgatgca gcgcttgaag cagctaacca agccttgcca
     1741 tccgtaagca ctgtgcatgc agacgtggcc gatgaggcag acgtccagaa gctgttcact
     1801 cacgtcaaag acaccttggg tgggctcgat gtactaatta acaacgcggg gattgccgga
     1861 cccacaggtg gcgttgaaac cttgtccaag gcgcactggg accagaccct agccgtgaac
     1921 attaccagcc agtttctctg tgcgcgccaa gcagtgccca tgctcaagga atcggcccac
     1981 ggtgtcatgc tcaacctgtc atcggcggcc ggccatctgg gtttcgcggg tcgttcaccc
     2041 tattcggcgt cgaaatgggc cgtggttggt tttaccaagt ccttggcgct cg
//
LOCUS       DATBNL010000009         2232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_59909, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000009 DATBNL010000000
VERSION     DATBNL010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59909"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VIC30_00115"
     CDS             <1..772
                     /locus_tag="VIC30_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020230876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEY7802830.1"
                     /translation="YVDQAVHEAMVNLEARPAPAGEMTVVLGSGWPGILLHEAVGHGL
                     EGDFNRKGSSVFAGRIGQRVASKGVTVIDDGTLSGRRGSLNIDDEGNPTQHNVLIEDG
                     ILKGYLQDTTNARLMGVAPTGNGRRESFAHLPMPRMTNTYMLGGADDPKEIVRSVKKG
                     LYAVNFGGGQVDITSGKFVFSASEAYMIENGEVTYPVKGATLIGNGPDALTRVSMIGN
                     DMQLDSGVGTCGKEGQSVPVGVGMPTIRIDGLTVGGTA"
     gene            1138..2211
                     /gene="aroG"
                     /locus_tag="VIC30_00120"
     CDS             1138..2211
                     /gene="aroG"
                     /locus_tag="VIC30_00120"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEY7802831.1"
                     /translation="MPHNTDDIRIREIKELAPPAHAMREFPCTESVSNVVHDARHGIH
                     RILHGMDDRMIVIIGPCSIHDTKAAMEYANRLKPVRERLKADLEIVMRVYFEKPRTTV
                     GWKGLINDPDLDGSFQINKGLRAAREILLDINELGLPAGCEFLDMITPQYIADLVAWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGNIKIAVDAMKAASQPHHFLSVTKGGHS
                     AIVSTEGNEDCHVILRGGKAPNFDAASVQAVCEELGKSGQAQRVMIDSSHANSNKKPE
                     NQPAVCHDIAQQVAAGDTRIVGVMVESHLVGGRQDLVPGQPLTYGQSITDGCIDWESS
                     EAVLEELAQAVQARRRTVAISGK"
BASE COUNT          505 a          533 c          651 g          543 t
ORIGIN      
        1 ttatgtagat caggctgttc atgaagccat ggtcaatcta gaagcccgtc cagcaccagc
       61 tggtgaaatg acggtggtgt tgggtagcgg ctggcctggt attttgctgc atgaagctgt
      121 gggccacgga cttgagggtg acttcaatcg caaaggttcg agtgtgtttg ctggccgcat
      181 tggccaacgc gtggcctcca aaggggtaac ggttatcgat gacggcacgc taagcggtcg
      241 ccgtggttcg ttgaacatcg atgatgaggg caatcccacc cagcataatg tgctcatcga
      301 agacgggatt ttgaagggtt atttgcaaga cacgactaat gcgcgcttga tgggtgtggc
      361 gccaacgggt aacgggcggc gtgaatcatt cgcccatttg ccgatgccgc gcatgaccaa
      421 tacctacatg cttggtggcg ccgacgaccc caaagagatt gtgcggtccg ttaaaaaagg
      481 tctttacgcg gttaacttcg gtggcggtca ggtcgatatc accagcggta agttcgtgtt
      541 ctctgcatca gaggcctata tgatcgagaa tggtgaagtg acttatcccg tcaaaggtgc
      601 caccttgatt ggtaacggcc cagacgcatt aacgcgggtg tccatgatcg gcaacgacat
      661 gcagctcgac agtggcgtgg gtacctgtgg caaagaaggg cagagcgtgc cagttggtgt
      721 cggtatgccg acgattcgta tcgacgggct caccgtcggg ggcacggcct agttcaatta
      781 accgacgtgg tttgttgtgc tgcagcaaca ttcgcggccg gttagctgaa aattgggtct
      841 gtgttttcga tggttcgcct gcctgtcaca cagaatgtgg tagattcgaa ttcatgatta
      901 aacatgcaac ctatttttgg ttttattttt ttagctttcc tcccctcgct ggcggaaggt
      961 cggttgccta gtacctagag aaactgaacc gaatctgaaa ccgccagccc aagctggcgg
     1021 ttttttttta agcgcaaaaa tggatcaggt cgtgttttgt ttttagaggt ttgagaggtt
     1081 tgtttttaga cccagtaacg atttaaatac tgaagaaatt tattcaagga gcttgctgtg
     1141 ccacacaata ccgatgacat tcgaattcga gaaatcaagg aactcgcgcc gcccgcgcac
     1201 gcgatgcggg agtttccctg caccgagtcg gtcagcaacg ttgtgcacga cgcccgtcac
     1261 ggcatccacc ggattttgca tggcatggat gaccgcatga ttgtgatcat tgggccgtgt
     1321 tctattcatg acaccaaagc ggcgatggag tatgccaacc gcctaaaacc ggtacgcgag
     1381 cgcctgaagg ctgaccttga gattgtcatg cgtgtgtatt ttgagaaacc acgcaccacc
     1441 gtcggttgga agggcctcat taatgatccc gacttagatg gcagcttcca aatcaataaa
     1501 gggctgcgcg ctgcgcgcga gatcctgctc gacattaacg agttgggctt gccagctggc
     1561 tgtgagtttc tggatatgat tacgccacag tacattgcag atctggtggc ttggggtgct
     1621 atcggtgctc gtacgactga gagtcaggtg catcgcgaat tggcctcagg cttgtcctgt
     1681 ccggttggat ttaagaacgg taccgatggc aacatcaaaa tcgcggttga tgccatgaaa
     1741 gccgcttctc agccccatca cttcctgtcc gttaccaagg gcggtcattc ggctattgtt
     1801 tctaccgaag gcaatgagga ctgtcatgtg atcctgcgtg gtggcaaggc gccgaatttc
     1861 gatgccgcca gtgtgcaggc agtgtgcgaa gaattaggta agtcgggcca agcccagcgt
     1921 gtcatgatcg attccagcca cgccaacagc aataaaaaac cagagaacca acctgccgtt
     1981 tgtcatgata ttgcacagca ggtcgcggca ggcgatactc gaatcgttgg ggtgatggtt
     2041 gagagtcatc tggtgggcgg gcgccaagac ttggtcccgg gacaaccttt gacttacggt
     2101 caaagcatca ccgacggttg tattgactgg gaatcttccg aggcggtctt ggaagaactt
     2161 gcacaggccg tacaggcccg acgcaggacg gtggctattt cagggaagta actcatgggg
     2221 cacatgccag ta
//
LOCUS       DATBNL010000010         1766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_99723, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000010 DATBNL010000000
VERSION     DATBNL010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99723"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1498)
                     /locus_tag="VIC30_00125"
     CDS             complement(<1..1498)
                     /locus_tag="VIC30_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VC_2705 family sodium/solute symporter"
                     /protein_id="HEY7802832.1"
                     /translation="MNGSAQGPYAWQLTLGKRYAFYALGFGLLIGASAILEVVGAARE
                     WIGYIFLFATVVMYAAIGIFCRTSDPIEYYVAGRRVPAVFNGMATAADWMSVASFLGV
                     AGTLYLSGFNGLAFILGWTGGYVLLALLIAPYLRRSGSLTIPDFLGTRFGGHLPRLVA
                     VVCTLACSFSYLVAQIYGVGLITTRLTGLSFELGVFIALGSMLVCSFLGGMRAVTWTQ
                     VGQYIILVIAYLLPVIWLSMSQADKVIPQAGAGHVMAQVAEREAEITADPVEAELRRY
                     WRAQADLKQIHIDALPLSWQTEKEALRNQLLRAREAEASMLQVRQLERELAKYPPTED
                     DAREYWAAERDEYRARAKPPEPFLQSFTQGSDGQWGDMQNNFLALLVCLMLGTAGLPH
                     ILMRSLTTPTVSAARRSVFWSLFFILALYLMAPALAVLVKNEIYQQVVGMSFADLPEW
                     VSVWSALDRSLVDLRDINGDGIVQLAELHLASDMVVLAGPEIGGLPYVM"
     gene            complement(1495..>1766)
                     /locus_tag="VIC30_00130"
     CDS             complement(1495..>1766)
                     /locus_tag="VIC30_00130"
                     /inference="COORDINATES: protein motif:HMM:NF025305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4212 domain-containing protein"
                     /protein_id="HEY7802833.1"
                     /translation="VHTKRQKRYWQASLTLIGTCLLVWLGVTLLPLILAQLQVTGTLF
                     GWPVVFALAAFGVPLVYLAIIGVYSLVMDRIESAPPAPSDEEPNP"
BASE COUNT          490 a          539 c          418 g          319 t
ORIGIN      
        1 acatcacata cggtagcccc cctatttcag ggcctgccaa caccaccatg tcagaagcca
       61 gatgaagctc tgccaattgc acaatgccgt caccgtttat atcgcgcaaa tcaaccagcg
      121 agcgatccaa tgccgaccag acactgaccc attctggcaa atccgcaaat gacatgccga
      181 cgacttgctg atagatctcg tttttaacta aaaccgccaa cgccggcgcc atcaaataaa
      241 gcgccagaat gaagaacaat gaccagaaca cagaccgtcg tgccgcactg accgtgggcg
      301 tggtcaacga tcgcatcaga atgtgcggca agcctgctgt tcccagcatc aaacacacca
      361 gcagcgctaa gaagttgttc tgcatgtcac cccactgacc atcactgccc tgggtaaacg
      421 attgcaagaa cggttcaggt ggtttggcac gcgcgcgata ctcatcgcgc tcggcagccc
      481 agtactcgcg agcatcgtct tcggtgggtg ggtacttggc caattcacgc tcaagctggc
      541 gcacttgcaa catggatgct tctgcttcgc gcgcgcgtaa caactggttg cgcagcgcct
      601 ctttttctgt ttgccatgac aatggcaatg cgtcgatatg gatttgcttc agatcagcct
      661 gtgcacgcca ataacgacgc agttcggctt caaccggatc ggcggtaatc tcagcttcgc
      721 gctcggccac ttgggccatc acatgcccgg caccggcttg cggaatcact ttgtcagcct
      781 ggctcatcga caaccagata acaggcagta aatacgcaat caccaaaatg atgtattgac
      841 caacctgcgt ccaggtaaca gcgcgcattc cacctagaaa cgaacatacc aacatgctgc
      901 ccaacgcgat aaaaacaccc agctcaaagg acagcccagt cagacgagtg gtgatcaacc
      961 ccacaccata gatctgcgcc accagataac taaacgagca agccaaagtg caaaccaccg
     1021 caaccagacg tggcaagtga ccaccaaacc gggttccgag aaagtcgggg atagttaagc
     1081 tgcccgaccg tctgagataa ggcgcaatca aaagcgccag caacacataa ccaccggtcc
     1141 aacccaagat gaaggccaaa ccattaaaac cgctgagata taacgtgccg gccaccccca
     1201 gaaatgacgc tactgacatc cagtcagctg cggtggccat gccattaaac accgcaggca
     1261 cgcgtcggcc cgctacgtag tattcgattg gatcagaggt gcgacaaaaa ataccaatcg
     1321 ccgcgtacat caccacggtg gcaaacaaaa agatgtaacc gatccactcg cgggctgcgc
     1381 ccacgacctc taatatcgct gaggcgccaa tgagcaaacc aaatccgagg gcataaaagg
     1441 cgtaccgctt acctagcgtt agttgccagg catacggtcc ctgagccgac ccattcacgg
     1501 attgggctcc tcatcgcttg gcgcgggcgg tgcagattcg atgcgatcca ttacaaggct
     1561 ataaacacca atgatggcca agtagaccag aggaacacca aaagcggcca gagcaaagac
     1621 caccggccag ccaaacagcg ttccagttac ctgtaattga gccagtatta aaggcaatag
     1681 cgtcacaccc aaccaaacca gcaggcatgt gccgatcagt gtcaggctcg cctgccagta
     1741 ccttttttga cgcttggtgt gcaccg
//
LOCUS       DATBNL010000011         3269 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_30011, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000011 DATBNL010000000
VERSION     DATBNL010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3269
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30011"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1322
                     /gene="ftsH"
                     /locus_tag="VIC30_00135"
     CDS             <1..1322
                     /gene="ftsH"
                     /locus_tag="VIC30_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006222882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEY7802834.1"
                     /translation="MVGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGAARV
                     RDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQMLVEMDGFESGQGV
                     IVIAATNRPDVLDPALLRPGRFDRQVVVPLPDILGREQILRVHMRKVPIGTNVDAMVL
                     ARGTPGFSGADLANLVNEAALFAARRNGRLVDMSDFEKAKDKIIMGAERRSIVMPEDE
                     RRNTAYHESGHAVVARMLPKTDPVHKVTIIPRGRALGVTMQLPEGDRYSMDKERLLST
                     IAVLFGGRIAEELFMDQMTTGASNDFERATAIARDIVTRYGMTTELGPMVYADNEGEV
                     FLGRSVTKTTHMSEATMQKVDAEIRKIIDEQYTRARTILEENRPKVETMAKALLEWET
                     IDSDQINDIIDGRPPRPPKVPDAPTDVTPPSAGPTADAPGGNPAEAV"
     gene            1334..2182
                     /gene="folP"
                     /locus_tag="VIC30_00140"
     CDS             1334..2182
                     /gene="folP"
                     /locus_tag="VIC30_00140"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003819873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEY7802835.1"
                     /translation="MAMIWQCGRFEFDLERPILMGIVNVTPDSFSDGGRHASTQAAVD
                     HARSLIQEGAQILDIGGESTRPGADPVSVSEELDRVLPVLEALGSDNVALSVDTCKPE
                     VMQHALDAGADIINDVTGFRRPAAVDVVASHDRCGVCTMHMQGEPRTMQQAPTYDDVV
                     QDVATALLASAKRLQDAGISVHRIALDVGFGFGKTVEHNYTLLRQIGSFVELGYPIVV
                     GVSRKSMIGTVTGRPVGERVTGSVAAALIAVTLGARILRVHDVQATRDAMTVWETVTY
                     GPEEKK"
     gene            2179..>3269
                     /gene="glmM"
                     /locus_tag="VIC30_00145"
     CDS             2179..>3269
                     /gene="glmM"
                     /locus_tag="VIC30_00145"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEY7802836.1"
                     /translation="MSRRYFGTDGVRGEVGGEVINPQFALKLGYAAGKVLARESSTKS
                     RPAVLIGKDTRISGYMLEAALEAGFAAAGVNVLLAGPIPTPAVAYLTRTWRLSAGIVI
                     SASHNPYYDNGIKFFSAQGTTLPDSVELAIEQALDEPMGCVSSDSLGRARRIEDAAGR
                     YIEFCKSTFASDLDLSGLSLVVDAAHGAAYHIAPHVFRELGATVHAIGTQPDGFNINE
                     GVGALHPENLVTEVQARGADFGIALDGDADRLQMVDSAGRLYNGDELLYAVVRDRAMR
                     APVAGVVGTLMSNLGLEQAFTAMDIPFERAAVGDRYVLEKLKENNWLFGGESSGHLLC
                     LDCHSTGDGIVAGLQVLAALRRHQTTLSA"
BASE COUNT          674 a          835 c          989 g          771 t
ORIGIN      
        1 tgatggtggg ttcgcccggt accggcaaaa cgctcttggc caaagccatt gctggcgaag
       61 ccaaagtgcc tttctttagc atttcgggtt ctgattttgt tgagatgttt gttggtgtgg
      121 gtgccgcacg tgtgcgtgac atgtttgaaa acgccaagaa gcacgcacct tgcattattt
      181 tcatcgacga aatcgatgcg gtgggtcgcc agcgtggcgc cggtcttggt ggcggtaacg
      241 atgagcgaga acagacattg aaccagatgt tggttgagat ggacggcttt gagtcaggcc
      301 agggtgtcat cgtcattgcg gcaaccaacc gccctgacgt gcttgacccc gctttgttgc
      361 gccccggtcg ttttgaccgc caggttgtgg tgcctctgcc cgacattctt gggcgcgagc
      421 agatcttgcg tgttcacatg cgtaaagtgc caattggaac caacgtcgat gccatggtgt
      481 tggcacgtgg taccccaggt ttctctggtg cggatttggc aaacttggtc aacgaagcgg
      541 ctttgtttgc ggcacgtcgt aatgggcgac tcgttgacat gtccgacttt gagaaggcca
      601 aagacaaaat catcatgggt gctgagcgtc gctcgattgt gatgccagaa gacgagcgtc
      661 gtaacacggc ttatcacgag tctggccacg cagtggttgc acgcatgctg cctaagacgg
      721 atccggttca caaagtcacc atcattccgc gcggccgcgc tttgggtgtg accatgcagt
      781 tgcctgaagg tgatcgctac agtatggata aagagcgttt gctctcgacc attgccgtgt
      841 tgtttggcgg tcgcattgcc gaagagttgt tcatggatca gatgaccacg ggcgcctcca
      901 acgattttga acgcgcaaca gcaattgctc gtgacatcgt gacgcgctat ggcatgacca
      961 ctgagcttgg acctatggtc tacgctgata atgaaggcga agttttcttg ggtcgtagcg
     1021 tgacaaaaac cacgcacatg tctgaagcca ccatgcaaaa agtggacgct gagattcgga
     1081 agatcatcga cgagcaatat acgcgtgccc gtacgatcct cgaggaaaac cgtcccaagg
     1141 ttgagaccat ggcaaaggcc ttgctcgagt gggaaaccat tgactccgat cagattaacg
     1201 acatcataga cggccgtcca ccgcgtccgc caaaggtgcc tgatgcacca acggacgtca
     1261 cgccgccatc agccgggcca accgctgatg ccccaggtgg caaccctgct gaggctgtct
     1321 gacaaagggc agtatggcaa tgatctggca atgtgggcgc ttcgagtttg atctcgagcg
     1381 cccaattttg atgggcatcg tcaatgtcac cccagactcg ttttcggatg gggggcggca
     1441 tgccagcacg caagcggcag ttgatcacgc ccgatcactg atccaagagg gtgcccagat
     1501 tctagacatc ggtggcgagt ctacaaggcc tggggctgac ccagtctcgg tgtcagaaga
     1561 gttagaccga gtgctgccgg tgctcgaggc gctcggctcc gataacgtcg cgttgtctgt
     1621 tgacacgtgc aagcctgaag tcatgcagca cgcgcttgac gccggtgccg acatcatcaa
     1681 tgacgtgaca ggttttcgac ggccagctgc cgttgacgtt gtggccagcc atgatcgctg
     1741 tggcgtgtgc accatgcaca tgcaaggcga acctcgaacc atgcagcagg cccccaccta
     1801 tgacgatgtc gtgcaagatg tcgcaacggc acttttagcc agtgccaagc gcttgcaaga
     1861 tgccggtatc tcggttcacc ggattgcact cgacgttggc tttgggtttg gcaagaccgt
     1921 ggagcacaac tacacgctgt tgcgtcagat cggctctttt gttgaacttg gttatccgat
     1981 tgtcgtgggc gtgtcgcgca agtccatgat agggacggtt acggggcgcc cggttggtga
     2041 gcgcgtgact ggcagtgttg ccgctgcgct gatcgctgta acattagggg cacgcatact
     2101 tcgcgtgcat gatgttcaag ccacgcgtga cgcgatgaca gtttgggaga cagtgaccta
     2161 cggtccagaa gaaaaaaaat gagtcgacga tattttggca ccgacggtgt ccgtggtgag
     2221 gtgggtggtg aggttattaa cccgcaattt gcgttgaaac tcggctatgc agccggtaag
     2281 gtgcttgcgc gtgagtccag tacaaagtcg cggcctgctg ttttgattgg taaggacacc
     2341 cggattagcg gttatatgtt ggaggctgca ttagaggcgg gttttgccgc ggccggtgtc
     2401 aatgtattac tcgcaggccc cattccgacg ccagcggtgg cctatttgac gcggacttgg
     2461 cgactgtcgg ccggtattgt gatcagtgct tcgcacaatc cttactacga caacggcatc
     2521 aagttcttct ctgcgcaagg cacaacgctg cccgattcgg ttgaactggc cattgagcaa
     2581 gcgcttgatg agcccatggg atgtgtctca tcggacagtc tggggcgcgc acgccgtatc
     2641 gaagatgccg ccggtcgcta tatcgagttt tgtaagagca cgtttgcgtc tgacttggat
     2701 ttgtctggct tgtcgctcgt tgtcgatgcc gcgcatggtg cggcctacca cattgcacct
     2761 catgtgtttc gggagcttgg cgcgacagtg catgcgattg gcacgcaacc agacggtttc
     2821 aatatcaacg aaggtgtcgg tgcgctgcat cctgagaatc ttgtaacgga agttcaagca
     2881 cgcggagcag acttcggtat tgcgctagac ggcgatgccg accgtctaca aatggttgac
     2941 tcggccggcc gtctctacaa cggtgatgaa ctgctctatg ccgttgtgcg tgacagagcc
     3001 atgcgtgcac cggttgctgg tgtggttggc acgctcatga gtaacttggg tttggagcaa
     3061 gcctttacag cgatggatat tccctttgag cgcgccgccg tcggtgatcg atatgtgctg
     3121 gaaaagctca aagaaaacaa ctggcttttt ggtggtgaga gttcaggtca tttattgtgt
     3181 ctagactgcc acagcacggg cgacggaatt gtggccggct tgcaagtgct cgcggcgtta
     3241 cgacgtcacc aaaccacgct atcggcttt
//
LOCUS       DATBNL010000012         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_139575, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000012 DATBNL010000000
VERSION     DATBNL010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139575"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VIC30_00150"
     CDS             complement(<1..627)
                     /locus_tag="VIC30_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY7802837.1"
                     /translation="MKIHEYQGKELLRQFGVTVPHGMPAFSVDEAMVAAEKLGGPVWV
                     VKAQIHAGGRGKGGGVKLAKSLEEVRELSEEILGMQLVTHQTGPEGQKVQRLLIEEGA
                     DIKKEYYVGIVTDRGSQRVCVMASSEGGMDVEEVAEKTPEKILKVFVDPAKGLTQEEA
                     EELALGIGVPQASVPKAAGEFQKLYKAYWDTDASLAEINPLILTGSGDI"
     gene            complement(745..1416)
                     /locus_tag="VIC30_00155"
     CDS             complement(745..1416)
                     /locus_tag="VIC30_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2889 domain-containing protein"
                     /protein_id="HEY7802838.1"
                     /translation="MPLSPPDCSRKPLHNRIIHAHSFEREDGLWDIEAELIDSKSYDY
                     TKTSGAVQRAGQPFHHMHLRITIDSDLVIQKAEAAYDAAPYGENCTCITTDYGDLAGM
                     SLLKGFRNQVRERFARTAGCTHLNELAGLLPTVAMQSMAAKRRKAQEAATGTAKKPFQ
                     LEGCHALRLDGAVVEEFYPQWYQSKAAKDGAAKNGAAKNEAAKNEAAKKDESVEASTT
                     EQQSP"
     gene            complement(1649..>2100)
                     /locus_tag="VIC30_00160"
     CDS             complement(1649..>2100)
                     /locus_tag="VIC30_00160"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7802839.1"
                     /translation="KSFTRSASGIKGSACPCSSACGPEAVGVQVAVTRRRPGVLTVQE
                     RQARIAANPLRADGIASGRRRLAATSDHLNPGVRTLQALRLAAGLSQKELAQRMDVLQ
                     SNIALLEQNPGVATLSTIRKLSWALNVSVVDVVGAIELTSRTACERA"
BASE COUNT          482 a          607 c          537 g          474 t
ORIGIN      
        1 gatgtcgccc gaaccggtca gaatcaacgg gttgatttca gccaatgacg catcggtatc
       61 ccagtaggct ttgtagagct tttgaaactc gccagctgcc ttgggcacag atgcctgtgg
      121 cacaccaata cccaaagcca gttcttcggc ctcttcttgc gtcaagccct tggcgggatc
      181 gacaaacacc ttgaggattt tttctggggt cttctcagca acttcttcga catccatgcc
      241 gccttcgcta gaagccatga cacagacgcg ctgtgaacca cggtcagtca caatacccac
      301 gtaatactct ttcttgatgt cagcgccttc ttcaatgagc aaacgctgca ccttctgacc
      361 ttctgggcca gtctggtgcg tgaccaactg catcccgagg atttcctcag acagctcgcg
      421 cacttcttca agtgacttgg cgagtttgac gccaccgccc ttgccgcgac cacctgcgtg
      481 gatctgggct ttaaccaccc aaaccgggcc gccaagcttt tctgcggcaa ccattgcctc
      541 atcaacgcta aatgcgggca tgccgtgcgg gacggttacg ccaaattggc gcaacagctc
      601 tttaccttga tattcgtgaa ttttcatggg aaacctgctc gtctgtcagt tggtcaagaa
      661 ttaaaaaaac tacgctaata aaacacattc ataaaactac tttctttggg ttcgccgtga
      721 cggatcacaa cgagctcaat ccggttaggg gctttgctgt tcagtcgttg acgcctctac
      781 cgattcatcc ttctttgccg cctcgttctt tgccgcctcg ttctttgctg ccccgttctt
      841 tgccgcacca tccttcgcag ctttactttg gtaccactgc ggataaaact cctcgaccac
      901 cgcgccatca aggcgcaacg catggcaacc ctcgagctga aacggctttt tagccgtgcc
      961 ggtcgcggcc tcttgggctt tgcgtcgttt agcggccatg gactgcatgg caacagtggg
     1021 caagagcccg gcgagttcgt ttaagtgcgt acagcccgcc gtgcgcgcaa aacgctcgcg
     1081 aacctggttt ctaaaaccct taagcaggct cataccggcc aaatcaccat agtccgttgt
     1141 aatacaggtg cagttctcgc cgtacggcgc tgcatcataa gccgcttcgg ctttctgaat
     1201 cacaaggtca ctgtcaatgg tgatgcgtaa gtgcatgtgg tgaaagggtt ggcctgcgcg
     1261 ctgcaccgca ccagaggttt tggtgtagtc gtaggacttg ctatcgatta gctcagcctc
     1321 aatatcccag agcccatctt cacgttcaaa cgagtgggcg tgaatgatgc ggttgtgtag
     1381 cggctttctc gagcagtcag gcggcgatag cggcatggtg ttttttggga agactaagca
     1441 caaaagtata gcgcgttaaa gcgaatgccc gctgacgagg gactgacgta accgcatggt
     1501 gaaaccagat acgggactgg gcacgaaaaa gttcacatgg tgaaagaaaa aggtggcgtt
     1561 ggcgcgccta aggggtcgag tgaggatgat gagccaggtc tgaggcttaa tccctgagca
     1621 aaaaacaaaa cagacaagcc aggatcgctc aagcacgctc acaagccgtg cgagatgtca
     1681 gctcaatagc accgacaaca tcaacaactg agacattgag tgcccatgac aactttcgaa
     1741 tagtcgacaa cgtcgccacg cccgggtttt gctccaacag agcgatattc gattgcagca
     1801 catccatccg ctgggccaat tccttttgag agagccctgc ggccaatcgc aaggcctgca
     1861 aggtacgcac accaggattc aagtgatccg atgttgcggc cagccgtcgc ctgccactcg
     1921 cgataccatc agcacgcagg gggttcgccg caattctcgc ctgacgctct tgcacagtga
     1981 gaacgcccgg tcgccgacgc gtcacggcaa cctgcacacc gacagcttca ggaccgcaag
     2041 cactcgagca agggcatgct gagcccttga tgcctgacgc agagcgcgta aaactcttaa
//
LOCUS       DATBNL010000013        13393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_20155, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000013 DATBNL010000000
VERSION     DATBNL010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 13393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13393
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20155"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1771
                     /locus_tag="VIC30_00165"
     CDS             <1..1771
                     /locus_tag="VIC30_00165"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY7802840.1"
                     /translation="VFANPLHPVSPTPENILGVLSLFVWSLVLIVTLKYVLFIMRFDN
                     GGEGGIVALLTLLLSRCAKNSRLRLWFVPLGLLGAALFYGDGVITPAISVVSAVEGLE
                     TISPDFKKYVVPVSLVVLVLLFLCQSRGTESIARLFGPVMLIWFFVLAALGIHAMSSH
                     LGVLEALNPWHALQFVATDPLLSFFLLGAVVLCLTGAEALYADMGHFGVSPIRRAWIL
                     VAFPALVLNYLGQGALVLQSPENLHNPFFRMAPEWGLNGLVVLATMATVIASQAVISG
                     VFSMTQQLIQLRAVPRMTVRHTSDDHTGQIYIPATNWIMLVLVVTMVLTFQSSNAMSG
                     AYGIAVTGTMVITDLFAIAVLLRVKRWRLPLALAVVIPFVVIDVLFFAANALKLMNGG
                     WFPVLLSSIILLIILTWMRGVASIQSRESEQSQPLQTFVQQLQPASTFRNHSTVVCLS
                     SDETVTPGALMLMSKRLSVVPEKVICLTVKVLEVPFVSAAERCELTDLGQGIYSVVLH
                     YGYRDRIRIAAELKAQFPDDDPIQDYGYLINRWSLAADKGDGWAVWRKRLFVYLFRNA
                     PAQWRVFEMPEQRVVELGQRLIL"
     gene            complement(1798..2595)
                     /gene="trpC"
                     /locus_tag="VIC30_00170"
     CDS             complement(1798..2595)
                     /gene="trpC"
                     /locus_tag="VIC30_00170"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017522458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEY7802841.1"
                     /translation="MSTTSTILDEILAAKVEQIKAARQLRSEADLLREARSRQDVRGF
                     ASAIEDTIAKGHPAVIAEIKKASPSKGVLREDFQPAQIAASYAAGGATCLSVLTDVKF
                     FQGSHDYLRQARAACTLPVLRKDFMIDPYQVISARAMGADCILLIAAALETSLMQELE
                     ACAEELALDVLVEIHDESELEQALTLNTNLLGINNRNLKTFEVSLENTLNLLDKIPAS
                     KRIVTESGILVRDDVTRMREHHVEAFLVGEAFMRAEDPGLALKELFF"
     gene            complement(2592..3623)
                     /gene="trpD"
                     /locus_tag="VIC30_00175"
     CDS             complement(2592..3623)
                     /gene="trpD"
                     /locus_tag="VIC30_00175"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEY7802842.1"
                     /translation="MTITPSEALSRCIEHREIFHDEMLHLMRTLMRGEMSPTMASALL
                     MGLRVKKETIGEITAAATVMREFATPVQTPNAADLLDLCGTGGDGTSTFNISTTAMFV
                     AAAAGVPVAKHGGRSASSPSGSVDIIETLGGRVELTPEQVAQCISEIGIGFMFAQAHH
                     SAMKHVAPIRKELGVRTIFNILGPLTNPAGAKNQMMGVFHPDLVGIQVRVLQSLGSRH
                     VLIVHGRDGMDEASLGAATLVGELKDGEIHEYEIHPEDFGLAMVSNRGIRVSSKDESK
                     AFVLEALENKPGAARDIVAYNAGLAIYAGNRATSMADGIKQAFELIASGAARAKLEQF
                     CTLTRKLAP"
     gene            complement(3650..4237)
                     /locus_tag="VIC30_00180"
     CDS             complement(3650..4237)
                     /locus_tag="VIC30_00180"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014749372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEY7802843.1"
                     /translation="MLLMLDNYDSFTYNLVQYFGELGEDVRVYRNDQISIEEIEALAP
                     DHICVSPGPCSPTEAGISVPLIKHFAGKTPILGVCLGHQSIGAAFGGRIVRAKELMHG
                     KTSEITHEGSDVFANLPSPYTVTRYHSLAIERATLPSCLAITAETADGEIMGIRHREL
                     PIYGVQFHPESILTEHGHSLLQNFLKLPHPIAAAA"
     gene            complement(4282..5808)
                     /gene="trpE"
                     /locus_tag="VIC30_00185"
     CDS             complement(4282..5808)
                     /gene="trpE"
                     /locus_tag="VIC30_00185"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEY7802844.1"
                     /translation="MTEIEFNALAKQGYNRIPLVAETYADLDTPLAIYLKLANAGPQN
                     GKYSCLLESVMGGERFGRYSFIGLPARTIIRSRGQQTEVLTDDKVVETHTGDPLAFIS
                     EYQARFKVALRPGMPRFAGGLAGYFGYDTVRHIEPKLGPADKPYPDGMGQGPPDLLLL
                     HVDELVIVDNVAGRTYLLVYADPSMPEAYNKAQQRLKELRIKLRKPVDIPYSHASVVT
                     EEVRSFEKEDYLAAVRRAKAYIEAGDLMQVQVGQVIAKPYRDSPLSLYRALRSLNPSP
                     YMYFWNFGDFQVVGASPEILVRQEHVANTESGQAETEVTIRPLAGTRRRGGTPEEDAA
                     LAKELQADPKERAEHVMLIDLARNDVGRVAKTGTVEVTDTMSIERYSHVMHLVSNVTG
                     RLAPEMTNMDVLRATFPAGTLTGAPKVRAMEIIDELEPVKRGIYGGATGYLSYGGEMD
                     VAIAIRTGIIQDGMLYVQAAAGIVADSDPEKEWMETEVKARAVLRAAEQVQTGLDSPI
                     "
     gene            complement(6103..6843)
                     /locus_tag="VIC30_00190"
     CDS             complement(6103..6843)
                     /locus_tag="VIC30_00190"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEY7802845.1"
                     /translation="MSNTNSNTNNNTNGWQGVLLDLDGTLLDTLPDLAASANESRRAV
                     GMPLLDESLIRTFVGKGADNLIKRTLAGSLDAPEPDAAIYEQARAVFFEHYRATNGDR
                     AVMYPGVREGLEALMALGLPMAVVTNKPYDFSVPLLKRTGLMTFIDVVVGGDTCAKRK
                     PDPEPIVYACQQLGIHPGTSLTIGDSINDALAARAAGGAVVAVPYGYNEGNPVTDLPV
                     DGIVDTVVHAVAWLKTNPTPQQQSERLK"
     gene            complement(6840..7550)
                     /gene="rpe"
                     /locus_tag="VIC30_00195"
     CDS             complement(6840..7550)
                     /gene="rpe"
                     /locus_tag="VIC30_00195"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEY7802846.1"
                     /translation="MTTSKSLPTARLAPSILSADFTRLGQEVTDVLAAGADWIHFDVM
                     DNHFVPNLTFGPMICEALRPTTDATIDVHLMVEPVDALVPLFAKAGANVITFHPEASH
                     HVHRTLAMIRDHGCKAGLVFNPATSLSWMDHVMDQLDIILLMSVNPGFGGQSFIESTL
                     PKLRQARTRIDQHMQSGGQPIALEVDGGVKVDNIGRIRAAGADTFVAGSAIFGKPDYA
                     AVIAQMRQEIAAADAQQA"
     gene            7701..8075
                     /gene="apaG"
                     /locus_tag="VIC30_00200"
     CDS             7701..8075
                     /gene="apaG"
                     /locus_tag="VIC30_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HEY7802847.1"
                     /translation="MKPYEISVDVQAQYVPDQSDPSQQEYFFAYTVRITNTGQLPAQI
                     VSRHWVIVDGNNERQDVRGLGVVGQQPLLAAGETFEYTSGCPLKTPVGSMYGHYLCVG
                     DDGQPFEAKISEFVLAMPRTLH"
     gene            8145..9422
                     /locus_tag="VIC30_00205"
     CDS             8145..9422
                     /locus_tag="VIC30_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEY7802848.1"
                     /translation="MAATVLVAGCSTPTRDVAPSATSSAAVAPTESVTDFRVPPLSSL
                     PAEKPRNLKGRYVQTTWANVPGWQSDNLQNYWANFVRNCRGLMRPTGDNLARPARANP
                     RVWHGVCSAAVNPATAPRANDEVAIRRFLQQYLAPWRLETASGQMASGMITGYYEPVI
                     EGSRVREGAYQWPLFAVPNDLLNIDLGALYPDLAGKRVRGKLDGNRVVPYDSRTELNN
                     PNRQPPAIVWINDPVDNFFLQVQGSGRVYLAAGPDAGTTIRLAYANHNGHPYRSIGRW
                     LVNQGEMSLDQASMQNIRAWARNNPGRIQEMLNANPAVVFFQEEVITDPNEGPKGAYG
                     VPLGAQRSIAVDTTYVPLGTPVYLMTTMPSSNQPLDRMVFAQDTGAAIKGAARGDYYW
                     GSGPEAGAMAGRMKQQGRMWLFWPKSAGAPSAQ"
     gene            9419..10594
                     /locus_tag="VIC30_00210"
     CDS             9419..10594
                     /locus_tag="VIC30_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY7802849.1"
                     /translation="MKTSTVVCGAGIVGMATALGLARAGVKDVVLLGPPTKLPTMDRN
                     TFHPRVYAISAASENYLAALGVWPLMNQARITRVEAMEIKGDKFGALYLRAWQAAQNA
                     LTWIVESGEIERVLQQALKVYGVTWIEDSLQSFDKQVGITTGGQTLEADLWVAADGAQ
                     SNLRDFAGLKYDETPYDAVGVVGHLTAEFAHQSSAFQWFRPEGVLGILPMPDTDEGHQ
                     VSMVWSLKTAYADTLLAMTPERQGEELAESLGKAMRGRLGRMTLRSPLRGFPLTLASS
                     PMIGDGVALVGDAAHRVHPLAGQGLNLGLGDAQALVKVVAEREPFLTPGDQSILRRYR
                     RSRAQAVWEMRLVTDGLKRLFDQEVAPLPWLRNAGMSLVDRIPMAKRLLIEAASRQA"
     gene            10617..11375
                     /locus_tag="VIC30_00215"
     CDS             10617..11375
                     /locus_tag="VIC30_00215"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEY7802850.1"
                     /translation="MIGFKQGLAVVVLAATTTMWLPAATAQSAESSAAAAANVGQSDQ
                     KTEAIKELFSERFGNMPVGEVRYAPFGLFEVQIGSSLVYTDEDVNFVLDGHMIDAKTR
                     QDLTQVRLEELAKIDFNALPMELAITQIRGDGSRKLALFEDPNCGYCKQLRRDMEGMD
                     DLTVYTYMLPILSPDSTEKVKNVWCAEDPSAAWDAWMIDGTVPESATCEVPVEELVQL
                     GRDLQVQGTPAIFFEDGSRVPGAISREELEKRLQ"
     gene            11480..12637
                     /locus_tag="VIC30_00220"
     CDS             11480..12637
                     /locus_tag="VIC30_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY7802851.1"
                     /translation="MTNPTSPTTPTTPTVPNTPTTPNALPGSSTPPLVKVLLLLVLAA
                     AVYFFSGFLVPVLAALIIGFASWPLYARLTKAMGGSTMWAATVALLIILLVLVVPLSF
                     ALYYAVTEATAFVRWLIEANVQGMQAPDWVMALPVAGESLAKTWNTYLGKPGAFGDWV
                     QAFSGQHIGDIYRIVIATTTDVVSIMLTVLFMLIALFFIYKDGETLAGQLDLAGERLL
                     PNRWQHFSRVVPATISSTVTGMGLIAIGEGVILGIAYWVVGFPSPVLMGVITGVMAMV
                     PGGAPLCYTLVSVYLIGSGDVVQGVGLYLWGSIELFIVDKTLRPRLVGGPVKLPFLPT
                     FFGLIGGVQTMGVVGLFVGPVLMALLVAIWREWIYNLKLDKQAVGAQAPGD"
     gene            complement(12750..12986)
                     /locus_tag="VIC30_00225"
     CDS             complement(12750..12986)
                     /locus_tag="VIC30_00225"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HEY7802852.1"
                     /translation="MHRVKNVETKPDHTLSVTFEDGTTGEVNLSDRLFGPMFEPLKDP
                     AYFAQASIDAFGVICWPNGADLAPDALYDKLKTA"
     gene            13137..>13393
                     /locus_tag="VIC30_00230"
     CDS             13137..>13393
                     /locus_tag="VIC30_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010089710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7802853.1"
                     /translation="MTVIHKAFKFRLNPTTAQTQQMAEFAGANRFVWNKALALNLSRL
                     ENKQPLLWYFELVYWLGLWKQSEEYGFLKAVHSQPLQQTLK"
BASE COUNT         2790 a         3511 c         3828 g         3264 t
ORIGIN      
        1 tgtctttgcc aatcctctac atcctgtgtc ccccacgcca gagaatattc tcggtgtgct
       61 gtcactgttc gtctggtcgc tggtgctgat agtgaccctg aagtacgtct tattcatcat
      121 gcgctttgac aatggcggtg agggcgggat tgtcgcgctg ttgacgttgt tactgagtcg
      181 ttgcgcaaag aacagccggc tacgattgtg gtttgtgcca ctcggtttgt tgggcgcggc
      241 actgttctat ggcgacggcg ttatcacgcc tgccatctcc gtggtctcag ccgttgaagg
      301 cttggagacg atctcaccgg atttcaagaa gtatgtcgtg ccggtctcct tggtggtact
      361 ggtgttgcta tttctttgcc aaagtcgtgg caccgaaagc atcgctcggc tgtttggccc
      421 ggtcatgctc atctggtttt ttgtattggc cgcgcttggc attcatgcca tgtcttcgca
      481 tcttggggtg ttggaggcac tgaatccctg gcatgcgctg caatttgtgg cgacagaccc
      541 gttgctcagt ttcttcttgt tgggcgcggt ggtcctgtgt ttgaccggag ctgaagcgct
      601 ctacgctgac atggggcatt tcggggtgag cccgatccgc cgggcctgga ttttggtggc
      661 gtttccggcg ttggtgctca attacctggg tcagggtgcc ttagtgctgc agtcaccaga
      721 gaacttacat aatccgtttt tccgaatggc gcctgaatgg gggcttaacg gcctggttgt
      781 gctggctacc atggccacgg tgattgcttc gcaagcggtt atctccggtg ttttttcgat
      841 gacgcagcaa ctcatacagt tgcgtgcggt acctcgcatg acggttagac acacatcaga
      901 tgaccacacc gggcagatat acataccggc aaccaactgg atcatgctgg tactcgtggt
      961 cacgatggtg ctgacctttc agtcatcgaa cgccatgagt ggtgcttacg gcattgccgt
     1021 gacgggcacc atggtgatca cggacttgtt tgccattgcg gtcttgctgc gcgtcaagcg
     1081 ctggcgcctg ccgctggcat tggccgtggt gataccgttt gtggtgattg acgtgctgtt
     1141 ctttgcggcc aatgcgctca aactcatgaa cggcggatgg ttcccggtat tgctgtcatc
     1201 gatcatcttg ctcattatcc tgacctggat gcgcggtgtg gccagcattc agtcgcgtga
     1261 atccgagcaa tcacaaccac tgcagacgtt cgtgcaacag ttgcagccag cctcgacatt
     1321 ccgtaatcat tcgaccgtgg tttgcttaag cagtgatgaa actgtcacgc caggtgcact
     1381 catgttgatg tctaaacgac ttagtgtggt gccggagaaa gtcatttgtt tgaccgtcaa
     1441 agtcttggaa gtgccgtttg ttagtgccgc cgagcgttgc gagctgactg atctgggtca
     1501 gggcatctat tcggttgtgc tgcactatgg ttaccgtgac cgtatacgga tcgctgccga
     1561 actgaaggca cagtttcctg acgatgatcc gattcaagac tatggttatt tgatcaaccg
     1621 ttggtctttg gcagccgata aaggcgacgg ttgggcggtc tggcgcaaac gactgtttgt
     1681 ctacctgttt cgcaatgcgc ccgcgcaatg gcgtgtcttt gagatgccag agcaacgtgt
     1741 cgttgagcta ggccagcggt tgattcttta agccgtttgg ctgacctgaa ctttggttta
     1801 aaaaaacagc tctttcagtg cgagcccagg atcttcggct cgcatgaaag cctcacccac
     1861 gagaaatgct tcgacatggt gctcacgcat gcgcgtgaca tcgtcacgca ccaagatccc
     1921 gctttcggtg acgatacgct tgctagctgg aatcttgtcc aacagattca gtgtgttttc
     1981 cagcgagact tcaaatgtct tgaggttgcg gttattgatg cccagcaggt tggtgttaag
     2041 cgtcaaggct tgttcaagct cggactcgtc atggatttcg accaaaacat cgagtgccag
     2101 ttcttcggcg caggcttcaa gctcttgcat gagtgacgtc tcaagtgcag cggcaatcaa
     2161 caaaatgcaa tcggccccca tcgcacgcgc agaaattact tggtagggat caatcatgaa
     2221 gtctttgcgc aacaccggca atgtgcaagc tgcacgtgct tggcgcaagt agtcgtgtga
     2281 cccttgaaaa aacttgacat cagtaagcac cgatagacaa gtcgcaccgc ccgcagcgta
     2341 ggacgcagca atctgtgccg gctggaaatc ttcgcgcagc acgcctttgg acggtgaggc
     2401 ttttttgatt tccgcaatca ccgccggatg gcctttggca atcgtgtctt cgatggcact
     2461 tgcaaagcct cgcacatctt ggcgtgaacg ggcttcgcgc agtaaatcag cctcgctgcg
     2521 caactgacga gcggctttaa tttgttcgac cttggcggcc aggatttcat ccaaaatggt
     2581 gctagtggtg ctcatggcgc cagtttcctt gtaagcgtac agaattgttc aagtttggcg
     2641 cgtgccgcac cgctggcgat aagctcaaac gcctgtttga tgccatctgc catgcttgtg
     2701 gcacggttgc ctgcgtaaat cgccaagcca gcgttgtagg ccacgatatc gcgagctgcg
     2761 ccaggtttgt tctcaagtgc ctcaagtaca aatgctttgg attcatcctt ggaagacacc
     2821 cgaataccgc ggttagacac catcgccaga ccgaagtctt cgggatggat ttcgtattca
     2881 tggatctcac cgtctttgag ttcacccacg agcgtggctg cacccaaaga tgcctcatcc
     2941 atgccgtctc ggccatgcac gatgagtaca tggcgtgaac ccagagactg caatacccgc
     3001 acttggatac ccactaggtc ggggtgaaac acacccatca tttggttctt ggcaccggcc
     3061 ggattggtca gtggcccgag gatattgaaa atcgtgcgta caccgagttc tttgcgaatg
     3121 ggggcgacgt gcttcatcgc actgtggtgt gcttgggcaa acataaagcc aatgccaatt
     3181 tctgaaatgc actgcgccac ttgctctggg gttaactcaa cccgcccacc gagtgtttca
     3241 atgatatcga cgctgccact cggtgaagag gcactacgcc caccgtgctt ggccacgggt
     3301 acgccagcgg ccgcggctac aaacatggca gtcgtcgaaa tgttaaaggt gctcgtacca
     3361 tcgccaccgg tgccacaaag atcaagcaag tcagcagcgt taggcgtttg taccggtgtg
     3421 gcgaactcac gcatgacggt ggccgcagcc gtgatttcgc cgatggtttc tttcttgacc
     3481 cgtaagccca tgagcaaggc tgacgccatc gtgggtgaca tttcaccgcg cattaaggtg
     3541 cgcatcaaat gcagcatctc atcgtgaaat atctcgcgat gttcaatgca gcgtgataag
     3601 gcctcgctcg gtgtaatggt catgcgtgtc tccgtatctt tgccagtgct taggctgccg
     3661 ctgcaatggg gtggggcagc tttagaaagt tttgtaagag gctatggccg tgctcagtca
     3721 ggatcgattc agggtgaaac tgaaccccat aaatgggtag ctcacgatgt cgaatcccca
     3781 tgatttctcc gtcggctgtc tcagcggtaa tggccaggca gcttggcaag gtcgcgcgtt
     3841 caatggccaa cgaatggtag cgcgtaactg tgtagggcga cggcaggttg gcaaacacat
     3901 cactgccttc gtgcgtgatc tcagaggttt tgccgtgcat cagttctttg gcccgcacga
     3961 tacgcccacc gaacgcggca ccaatcgatt ggtgacccaa gcacacgcct agaatcggtg
     4021 tcttgccggc aaagtgcttg atcaatggca cagagatacc cgcctctgtg ggtgagcaag
     4081 gccccggtga tacgcaaatg tgatccggcg caagcgcctc gatttcttca atcgagattt
     4141 ggtcgttgcg gtagacgcgc acatcttcac ccagttcacc gaagtattga accaggttgt
     4201 aggtaaatga atcgtagttg tcgagcatga gcagcataga agtctcgctt gtcgatgatg
     4261 tctggcagta agtagtaagc cctagatggg gctatctaaa cccgtttgta cttgttcagc
     4321 ggcccgtaaa accgcccgtg ccttgacctc ggtttccatc cattcttttt ctgggtcgga
     4381 atcggccacg atgcctgcgg ctgcctgtac gtagagcatg ccatcctgga tgatgccggt
     4441 gcgaatcgct atggcgacat ccatctcgcc gccatagctc aagtagcctg tggcaccacc
     4501 ataaatgcca cgcttgacgg gctcgagctc atcgatgatt tccatggccc gcactttggg
     4561 tgcccctgtg agcgtgcccg ccgggaaggt ggcgcgcaag acatccatgt tagtcatctc
     4621 tggcgctaag cgaccggtca cgttggacac caagtgcatg acatgcgagt agcgttcaat
     4681 ggacatggtg tcagtgactt cgacggtccc ggtcttggca acgcgaccca catcattgcg
     4741 tgccagatcg atgagcatta catgctcggc acgctctttc gggtcggctt gcaattcctt
     4801 ggccagtgcg gcatcttcct cgggtgtgcc gccgcgacgg cgggtgccag ccagtggtcg
     4861 gatggtgacc tcagtttcgg cctgcccgga ctccgtattt gccacatgtt cttgccgcac
     4921 caagatttcc ggtgaggcac cgacaacctg aaagtcacca aagttccaga agtacatgta
     4981 gggcgacgga ttcagtgaac gcagcgcccg gtagagtgac aagggtgagt cacgatacgg
     5041 tttggcaatg acttgtccga cctggacttg catcagatca cccgcctcaa tgtatgcctt
     5101 ggcgcggcgc acggctgcta agtaatcctc tttttcaaag ctacgcacct cttcagtcac
     5161 cacgctggca tggctgtagg gaatatccac gggcttgcgc agtttgatgc gtaattcttt
     5221 taagcgttgt tgcgctttgt tataggcctc aggcatgctc gggtcggcat agaccaagag
     5281 ataggtgcga ccggccacgt tgtcgacaat gacaagctcg tcgacgtgca gcagcaatag
     5341 gtcgggtggg ccttgaccca tgccgtcggg atagggtttg tcggctggtc cgagcttggg
     5401 ctcaatgtgc ctgaccgtgt catagccaaa atagcctgcc aagccaccgg caaagcgtgg
     5461 catgcctggg cgcagcgcta ccttgaagcg tgcttggtat tcggagataa acgccagcgg
     5521 atcaccggtg tgtgtctcaa cgactttgtc gtctgtcagc acctcagttt gctgaccacg
     5581 cgagcgaatg atggtgcgtg ccggcaaccc gataaacgaa tagcgtccaa agcgctcgcc
     5641 acccatgacc gattcgagca ggcatgagta tttgccgttc tgtggacctg cattggccag
     5701 tttgaggtag atggccagtg gcgtatcaag gtcggcgtag gtttccgcca ccagtggtat
     5761 ccggttgtat ccctgtttgg ccagtgcgtt gaattcaatt tctgtcatga gatttcactg
     5821 tggttaattg attgggttgt cagggggccg gactatgtaa gggtgttttg gttgatcaac
     5881 aaaaaagccc gaccacatca aatgggcggg ctcgcttggt tgtcttggcc gcatgatgcg
     5941 accggtcctc gggcctaccc gttatgcgaa cgccaccagc gccaagaggc gccagttgtc
     6001 acgatcggga aggcttttaa tttcatgttt ttgcgtatgt tcttaaactt tgcttgaact
     6061 gacttaattt aattacttca gcttgattac ttcacttact tgttacttca acctttcgct
     6121 ttgttgttgc ggtgtcgggt tggttttgag ccacgccacc gcatgaacaa cagtgtcaac
     6181 tataccatcg acaggcagat ctgtgaccgg gttgccctcg ttgtaaccat agggcacagc
     6241 caccaccgca ccgcccgctg ctctggccgc aagcgcgtca ttaatcgagt caccaatggt
     6301 cagtgatgtc ccaggatgga tacccaactg ttggcacgca taaacaatgg gttctgggtc
     6361 aggcttgcgc ttggcgcagg tgtcgccacc gaccacgaca tcgatgaagg tcatcagacc
     6421 ggtgcgctta agcaatggca cgctaaagtc atagggtttg ttggtgacaa cggccatggg
     6481 caggcctaat gccatgagcg cttctaagcc ttcgcgcacg cccgggtaca tcacggcgcg
     6541 gtcaccgttg gtggctctgt aatgctcaaa aaacaccgcc cgggcttgct cataaatggc
     6601 cgcatcgggc tccggtgcat cgaggctgcc tgccagcgtg cgtttaatga gattgtcggc
     6661 gcctttaccc acaaaggtgc gaatcagcga ttcgtcgagc agcggcatgc ccacggcgcg
     6721 acgcgattcg ttggcacttg cggccaagtc cggtagcgta tcaagtagcg ttccatcgag
     6781 atcgagcaag acgccttgcc agccgttggt gttgttgttt gtgttgctgt ttgtgttgct
     6841 catgcttgtt gagcatccgc ggcagcgatc tcttggcgca tttgggcaat gaccgccgcg
     6901 tagtctggct taccaaatat cgctgagcca gccacaaacg tgtcagcgcc cgcggcacgg
     6961 atacgcccaa tgttgtcgac tttaacgccg ccatcgactt ctagcgcaat cggctgaccg
     7021 ccgctttgca tgtgctgatc aatacgtgtg cgtgcttggc gcaacttggg cagcgttgac
     7081 tcaatgaatg actgcccccc gaaacctggg ttgaccgaca tcagcaagat gatgtcgagt
     7141 tggtccatga catgatccat ccacgacagt gaggtggctg gattaaagac caggccggct
     7201 ttacagccat ggtcacgaat catggccaat gtgcggtgca cgtggtgtga ggcttctggg
     7261 tgaaaagtaa tgacgttggc cccggccttg gcaaacagtg gcacgagcgc gtcgaccggt
     7321 tcgaccatca ggtgcacatc gatggtggca tcagtggtcg gacgcagcgc ctcgcagatc
     7381 atcgggccaa atgtcaggtt gggaacgaaa tggttgtcca tgacgtcaaa gtgaatccag
     7441 tccgcgcccg cggcaaggac atcggtgact tcttggccta aacgcgtaaa gtccgcagat
     7501 aaaatactag gtgctagccg ggcggtgggc aacgattttg aagtagtcat ggtgtaatgc
     7561 agtcaatggt cagttactgg gtggaaccac agggttagat cacggggttt aaccgcgggg
     7621 tttaaccact taagccacca ttattgcagt gaattgaccc cagttgatcc gtgtttttga
     7681 tttgcaagga taatgccagc gtgaaaccct acgagatatc ggttgatgtg caggcgcagt
     7741 atgtgcctga tcagtcagac ccatcacagc aagagtactt cttcgcctat acggttcgta
     7801 tcaccaacac ggggcagttg cccgcgcaga tagtcagccg tcattgggtc atcgttgacg
     7861 gcaacaatga gcgtcaagat gtgcgtgggc ttggtgtggt cgggcagcaa cccttgttag
     7921 ccgcaggcga aacgttcgag tacaccagtg gctgtccctt aaaaaccccg gtcggcagca
     7981 tgtatggtca ctatctgtgt gtgggtgatg acggacagcc gttcgaagcc aagatttccg
     8041 aatttgtgct ggccatgcca cgcaccttgc attaagaggc cagccccatg aatgattctt
     8101 tgcgccattg tctgcgtcac tccaagaccc gtttgtactt tgccatggct gcgacggtct
     8161 tggtggcagg ttgcagcaca cctacccgtg atgtggcgcc tagtgcgacc tcgagcgcag
     8221 cagtagcgcc aactgaatcc gtgactgact tcagggtccc gccactttca agcctgcccg
     8281 ccgagaagcc aaggaacttg aagggtcgtt atgtccagac aacctgggct aacgtccccg
     8341 gctggcaaag cgacaaccta caaaattatt gggccaactt tgtgcgcaat tgccgtggtt
     8401 tgatgcgccc aaccggtgac aacttagccc gcccggcacg tgccaacccc cgagtctggc
     8461 atggtgtgtg ttcagccgcg gttaaccctg ccacggcccc acgggccaat gatgaggttg
     8521 cgatccgacg ctttctacag cagtaccttg ccccttggcg cttagaaaca gcttcgggcc
     8581 aaatggccag tggcatgatc acgggttact acgagccagt tatcgagggc tcgcgggtgc
     8641 gcgagggcgc ttaccaatgg cccttgtttg ccgtgcccaa tgacctattg aatattgatt
     8701 tgggtgcgct ttaccctgac ctggctggca agcgtgtgcg cggcaagctc gatggcaatc
     8761 gtgttgtgcc ttacgacagc cgcaccgaac taaacaaccc gaatcggcag ccaccagcga
     8821 ttgtctggat caacgaccca gtggataact ttttcttgca agtgcaagga tcaggacggg
     8881 tgtatctagc cgcgggtccc gatgcaggca ccaccataag actggcctat gccaaccaca
     8941 acggccaccc gtaccgctcg attggccgtt ggctggtcaa tcaaggcgag atgtcgcttg
     9001 atcaagcctc catgcagaac attcgtgcct gggccagaaa caacccagga cgcattcaag
     9061 aaatgttgaa tgccaatccg gcggtggttt ttttccagga agaagtgatt acggatccca
     9121 acgaaggtcc caaaggtgcc tatggcgtgc cgctaggcgc acaacgttcg atcgccgtgg
     9181 acaccaccta tgtgccgcta ggtacaccgg tgtatttgat gaccacgatg ccgtcttcga
     9241 atcaaccgct agaccgcatg gtgtttgcgc aagacaccgg tgcagcgatt aaaggtgcag
     9301 cacgaggtga ctattactgg gggtctggcc ccgaagcagg tgccatggcc gggcgtatga
     9361 agcagcaggg ccggatgtgg ctcttctggc ctaaatcagc tggagcaccg agcgcgcaat
     9421 gaagacctcc actgtcgtct gtggtgcagg cattgttggc atggcaactg ccttggggct
     9481 agcacgcgct ggcgtcaagg acgtggtgct gttgggcccg ccaaccaagc tgccgacgat
     9541 ggatcgcaac acctttcatc cgcgggtcta tgcgatctcg gcggccagtg agaactactt
     9601 ggcagcgctt ggcgtgtggc ctttgatgaa ccaggcgcgc atcactcggg ttgaggccat
     9661 ggagatcaag ggcgacaaat ttggggcgct ttatctgcgc gcctggcagg ccgctcagaa
     9721 cgcactgacc tggattgtcg agtcaggtga aatcgagcgt gtgttgcagc aggccttaaa
     9781 ggtctacggc gtcacctgga ttgaagactc cctgcaaagc tttgacaagc aggttgggat
     9841 caccacgggt gggcaaacgc ttgaagccga tctgtgggtg gctgcagatg gtgcgcagtc
     9901 taaccttcgc gactttgctg gcttgaaata tgacgagaca ccctatgatg cggttggtgt
     9961 ggtggggcat ttgactgccg agtttgcgca tcaatcgtct gcgtttcagt ggtttagacc
    10021 cgagggcgta ctgggtattc tgcccatgcc agacaccgat gaaggtcacc aggtctccat
    10081 ggtctggtcg ttgaaaacgg cctatgccga taccttgctc gccatgacac ctgaacgaca
    10141 aggcgaggaa cttgctgagt ctttaggcaa ggcgatgcgc ggtaggctcg ggcgtatgac
    10201 gcttagaagc ccattgagag gtttcccctt gacgttggct agctcgccca tgattggtga
    10261 cggtgtggcg ttggttgggg atgccgccca cagggtgcat ccgttggccg ggcaagggtt
    10321 gaacttagga cttggtgatg cgcaagcctt ggtaaaggta gtggctgagc gtgaaccttt
    10381 tctaacacca ggtgatcaaa gcattttgag acgctatcgc cgttcgcgtg cacaggcggt
    10441 ctgggagatg cgtctggtta ccgatggtct gaagcgtctt tttgaccaag aagttgcgcc
    10501 attaccatgg ctcagaaacg ccggcatgag tctggttgat cgcataccca tggccaagcg
    10561 gttgctcatt gaggcggcat cgcgacaggc atagagataa cgaaacagga gaggacatga
    10621 ttggatttaa acaaggcttg gcagtagtgg tgctagctgc gacaacgacg atgtggttgc
    10681 ctgcggcaac ggcacagtct gcagaatcga gtgccgctgc cgcggcgaac gttggtcaat
    10741 ctgaccagaa gactgaggcg atcaaggagt tgttcagcga gcgttttggc aacatgcccg
    10801 tgggtgaggt gcgttatgcg ccgtttggtt tgtttgaggt gcaaatcggt agcagtctgg
    10861 tctacaccga tgaagacgtg aactttgtgc tcgatggcca catgattgac gccaaaacac
    10921 gtcaggatct gactcaggtc agactcgaag agttagccaa aatcgacttc aatgccttgc
    10981 ccatggagtt ggccattaca caaatacgtg gtgacggttc gcgcaaacta gccctgtttg
    11041 aagaccccaa ctgtggctat tgcaagcaac tgcgtcgtga catggaaggt atggacgatc
    11101 taacggtcta cacctacatg ctgcccatcc tctcgccaga ttccactgag aaagttaaaa
    11161 atgtctggtg tgctgaagac ccaagcgctg cttgggatgc ctggatgatt gacggcacgg
    11221 tccccgagtc agccacctgc gaagtgcccg ttgaggagct cgtgcagtta ggacgtgact
    11281 tgcaggttca aggcacgcct gcgattttct ttgaagacgg ttcgcgtgtg ccgggtgcca
    11341 tttcccgtga ggagctggaa aagcgccttc agtgaatcga cttcagtgaa tcaataccaa
    11401 taagccacac actaaaaatc gacacataga caggctaata tccgagcggt aattcactct
    11461 cggtattggc ctgtctttta tgacgaaccc cacatctcct accaccccga ctacccccac
    11521 cgtccccaac acaccgacaa cgccaaacgc tttgcctggc tctagcacac cgcctttggt
    11581 caaggtgttg cttttgttgg tgttggctgc ggcggtctat ttcttttctg ggtttttggt
    11641 gccggtgctt gcggcgttga tcattgggtt tgccagttgg ccgctgtatg cacgcctgac
    11701 caaagccatg ggtggcagca cgatgtgggc agccaccgtt gcgctactaa tcatcttgtt
    11761 ggtgctggtc gtgcccttgt cgtttgcgct gtattacgcg gtcactgaag cgactgcctt
    11821 tgtacgctgg ctcatcgagg ccaacgtaca aggcatgcaa gcacccgatt gggttatggc
    11881 tttgcctgtg gccggagagt cgctagccaa gacctggaat acctatctcg gtaagcctgg
    11941 ggcattcggt gattgggtgc aagcattcag tggtcaacac attggtgaca tttaccgaat
    12001 tgtgattgcg accaccacag acgtggtgtc gatcatgctc acggttttgt ttatgttgat
    12061 tgcgctattt tttatctata aggacggcga aaccctggcc gggcaactcg acttggcagg
    12121 tgagcggttg ctgcccaatc gttggcaaca tttctctcgg gtggtgcccg ccacgatcag
    12181 ctcgacagtt accggcatgg gattaattgc cattggtgaa ggtgtcattc tcggcattgc
    12241 gtactgggtt gtgggtttcc cttctccggt actgatgggg gtgatcactg gcgtcatggc
    12301 catggtgccc gggggcgcgc cgctttgcta caccttggtg tcggtttatc tgattgggtc
    12361 aggcgatgtg gtgcaaggcg ttgggcttta tctgtggggc tcgattgagc tattcatcgt
    12421 cgataagacc ttgcgtccga ggcttgtggg tggcccggtt aagttgccgt ttttacccac
    12481 gttctttggc ctgattggcg gcgtgcaaac catgggcgtg gtcggcttgt ttgtaggacc
    12541 agtactaatg gcattgctcg tggcgatttg gcgagagtgg atctacaact taaaactaga
    12601 taaacaggcg gtgggggcgc aggcgccagg tgactaagtc actgccaccg atggcgcaac
    12661 cttgatgcca acgaaccaga gggccactga accacagcat caattaacta cagcatcaat
    12721 caactgcagt tccactggcc ccaacagcct caggccgttt tcagtttgtc gtacaaggca
    12781 tcaggcgcta aatctgcacc attaggccag cagataacgc caaacgcatc gattgaggct
    12841 tgcgcaaagt acgccggatc ttttagtggc tcgaacatag gtccaaacaa tcgatccgag
    12901 aggttaacct cacctgttgt gccgtcttcg aaggtgactg ataaggtgtg atcgggtttg
    12961 gtttcgacat ttttaactcg atgcattctt gttaattacc atccagctag taaagccccg
    13021 ttcttcagga cggggatgta agcgcgggcg tagccagtgc agtgtgtcag ttttttgttt
    13081 tttatatcat cctgatctgc cgtatcttcg ctgtctttga tacaatcatt gccattatga
    13141 cagtgattca caaggccttt aaattccggc tcaaccccac cacagcgcag acgcaacaga
    13201 tggctgagtt cgccggtgcc aaccgcttcg tgtggaataa ggccctagcg ttaaatctgt
    13261 ctcgccttga aaacaagcaa ccactgctct ggtacttcga gttggtctat tggcttggac
    13321 tgtggaagca gtccgaggag tatgggtttt taaaagccgt gcattcccag ccgttgcaac
    13381 aaaccctcaa aga
//
LOCUS       DATBNL010000014         1949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_119697, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000014 DATBNL010000000
VERSION     DATBNL010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119697"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..154
                     /locus_tag="VIC30_00235"
     CDS             <1..154
                     /locus_tag="VIC30_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006763390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY7802854.1"
                     /translation="RTEGRFVIYAAEFESMAGLLAFLTEDCCGGNPCLSAMSPEQIRR
                     CGTTTQ"
     gene            232..750
                     /locus_tag="VIC30_00240"
     CDS             232..750
                     /locus_tag="VIC30_00240"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEY7802855.1"
                     /translation="MTTETPNEQRPWNVLFLCRANSARSQIAEVLLTRLGGGRFKVYS
                     AGSHPAAAVHPLALDVLSGMDFPLETLRPKDWNEFGQPDAPVMDFVFTVCDDTAGEVC
                     PTWPGQPMTAHWGVPDPAQVQGSDAVKKTAFADALRGLRRRLEVFVELPIEKLDRLSL
                     QKKVDEIGKTSA"
     gene            798..1844
                     /gene="arsB"
                     /locus_tag="VIC30_00245"
     CDS             798..1844
                     /gene="arsB"
                     /locus_tag="VIC30_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004335995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HEY7802856.1"
                     /translation="MSVFERYLSLWVVLCMAAGIVLGNVAPGLAQFVGGLEIAHVNLP
                     VGLLIWVMIIPMLMKIDFSSIGDVWQQRAGIGITLVVNWAIKPFTMAALGWLFIGYVF
                     RPWLPADQIDSYIAGLILLGAAPCTAMVFVWSNLCKGNANFTISQVALNDLVMVFAFA
                     PIVALLLGVSSIPVPWATLLLSVVVYIVIPLGIAQWWRARLMRHGPQAYARALERIGP
                     FTIMALLATLVLLFSFQGEAILSQPLIIGMLAVPILLQGLLIAAIGYALNLRCRVRHD
                     VAGPSTMIGASNFFELAVAVAIVMYGFDSGAALATVVGVLIEVPVMLWLVRMVNRSKG
                     WYEQRIEAPSGNQS"
BASE COUNT          377 a          496 c          571 g          505 t
ORIGIN      
        1 tagaaccgaa ggccgttttg tgatctacgc cgccgagttt gagtccatgg ctggcttgtt
       61 ggcctttttg actgaagact gctgtggcgg caacccttgt ctgtcggcga tgtcgccaga
      121 acaaattcga cgctgtggca caaccactca gtagtccatg caggctagat accccatatc
      181 catcacacat ccaaacaaac aactctcccg accaccactt ggagtcgcac catgaccacc
      241 gaaacaccca acgaacaacg cccttggaat gttttgtttt tatgccgcgc taactcagcg
      301 cgcagtcaga tcgccgaagt cttgctgacc cgtctgggtg gtggacgttt taaggtttac
      361 agtgctggca gtcaccctgc tgcggctgtt caccctttgg cgctcgatgt gctgtcgggc
      421 atggattttc cgttagaaac cctgcgtccc aaggactgga atgagtttgg tcagcccgac
      481 gcgccagtca tggactttgt gttcacggtt tgcgatgaca ccgcgggtga ggtttgcccg
      541 acgtggccgg ggcaacccat gacagcacat tggggtgtgc ccgatccggc acaggtccaa
      601 ggcagtgatg ccgtgaaaaa aacagcgttc gcagatgcac tgcgtggact gcgtcgccgt
      661 ctggaagtgt tcgttgaact tcccattgag aagctcgacc gcctatcctt acaaaagaag
      721 gtcgatgaga tcggtaaaac cagcgcgtga attaacaaag ttaatcaagc aagtgaacca
      781 agcaatgaag cgaacagatg agtgtatttg agcggtatct aagcctctgg gtggtgctgt
      841 gcatggccgc aggtattgtg ttgggcaatg ttgcaccggg tctggcgcag tttgtgggag
      901 ggcttgaaat tgcccacgtg aacctgccag tgggcttact catctgggtg atgatcatcc
      961 ccatgctcat gaagatcgat ttctcgagca ttggagatgt gtggcagcag cgtgccggta
     1021 ttggcatcac actcgtggtg aattgggcaa tcaagccgtt caccatggct gcgctcggtt
     1081 ggctttttat cggatatgtg tttcgcccct ggctgcctgc cgatcaaatc gacagttaca
     1141 tcgccggttt gatcttgttg ggtgctgcgc cttgcacggc catggtgttt gtttggagca
     1201 acctgtgcaa aggcaatgcc aatttcacca tcagccaggt cgcgctcaat gatttggtga
     1261 tggtgtttgc gtttgccccg attgtggcac tgttgctagg ggtgtcatcg atcccggtgc
     1321 cgtgggctac cttgctgttg tcggtggtcg tgtacatcgt tataccgtta ggcattgcgc
     1381 agtggtggcg agccagattg atgcgtcatg gccctcaggc gtatgcccgc gcgcttgagc
     1441 gtattggtcc gtttaccatc atggctttgc tagccacatt ggtgttgttg ttctcattcc
     1501 agggtgaagc gattctctcg caaccgctga tcatcggcat gttggctgtg ccgattctgt
     1561 tgcaagggct gttaattgcg gcgatcggtt atgcgctgaa cttgcgttgc cgggtacgcc
     1621 atgatgtggc tggcccgtca accatgattg gggcatcgaa cttttttgaa ttggctgttg
     1681 ccgttgctat tgtgatgtac ggttttgaca gcggcgcagc cttagccacg gtcgtgggcg
     1741 tgctcattga ggtgccggtg atgttatggc ttgtgcgtat ggttaaccga tccaagggtt
     1801 ggtacgagca gcgcattgag gcgccgtcgg gcaatcagtc ttagcgcttg cgggccacca
     1861 agtccacgag cgcggacagg ccgcggtggc gatcaccttc actaagctca gcgtcgtatt
     1921 cctcaaggac ttcaatgtcc atatcgcca
//
LOCUS       DATBNL010000015         2753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_189350, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000015 DATBNL010000000
VERSION     DATBNL010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189350"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            225..1883
                     /locus_tag="VIC30_00250"
     CDS             225..1883
                     /locus_tag="VIC30_00250"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEY7802857.1"
                     /translation="MAANVALAQINAVVGDFEGNAGQIETMARQAAAAGADVLLTPEM
                     ALTGYPAEDLLLRPAFVEQERVALAALAKRLADLPGLAVVVGHVHTQGSELFNAASVL
                     LAGKTIAQYYKHELPNYGVFDEKRYFVAGHEACVFEHAGIRFGLNICEDSWFKRAPQA
                     AVEAGAQCLLVLNASPFHMGKFNHRLDMMRRCVDRAGVSLVYANLCGAQDELVFDGMS
                     FGLDKSGHCVGHGPAFDEALLHLEVHPGGGLSKAEGPWTAVTSMEEEAEHDHLSLTWQ
                     ALVTGVRDYVHKNGFKSVVLGLSGGLDSAVVLAIAVDALGADQVMTVMMPSAYTADIS
                     LTDAADMATRVGVRYEQVAIGEITGQFESALAPLFAGTSADTTEENIQARVRGTLLMA
                     LSNKFGSLVLTTGNKSELTTGYCTLYGDMAGGFSVFKDVPKNLVYRLARWRNQTTEVI
                     PERIITRAPSAELRPDQTDQDSLPSYEVIDSIISGYVDHNLPVSRLIESGLDAQAVHQ
                     VVRLLRINEYKRRQGAPGPKITVRAFGRDWRYPLSNAFRETGPT"
     gene            1909..2247
                     /locus_tag="VIC30_00255"
     CDS             1909..2247
                     /locus_tag="VIC30_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY7802858.1"
                     /translation="MKLVTAIIKPFKLDEVREGLSEVGITGLTVTEIKGFGRQKGHTE
                     LYRGAEYVVDFLPKIRVEVAVSDEQVEPVIEAIIKAARTGKIGDGKIFVTPLDEVVRI
                     RTGEQGDEAL"
     gene            2410..>2753
                     /locus_tag="VIC30_00260"
     CDS             2410..>2753
                     /locus_tag="VIC30_00260"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011546144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY7802859.1"
                     /translation="MKPFEWHNPYPSVRIPLFARNVVSTSHPLAAQAGVRILYQGGNA
                     VDAAIAAAAAITLVEPVSCGLGSDAFAIVWHEGKAHGLNASGHSPAAWNVDYFAQKYG
                     LDAQGLANAPKRG"
BASE COUNT          595 a          674 c          819 g          665 t
ORIGIN      
        1 ttgggctttg ttggcgaatt ggttttgtgg gggctggggg ttttgtttca tgattcatgg
       61 attatagagt gcttgcgggc gggcggcagc ggtgatgggg aaggttggag atgggtgttg
      121 aaggtgcatg ttagaggcgc atgtttcggg cgcatgttta agccgacctt tagccacccg
      181 gcgtgtaata atcagcgttc acggttatgt acagagagac ttccatggcg gcaaacgtcg
      241 cgctagcgca aatcaatgca gtggtcggtg attttgaggg taatgccggt caaatcgaga
      301 cgatggccag acaagccgcc gcggcaggcg ctgatgtgtt gctcacgcct gaaatggcac
      361 tgaccggcta tccggctgag gatttgttgc tgcgcccagc gtttgtggag caagagcgtg
      421 ttgcactggc ggcgctcgcc aaacgtttgg cggatttgcc gggactggcg gtggtggtcg
      481 ggcacgtgca tacccagggc agtgagctct tcaacgcagc cagcgtgctg ctggctggta
      541 aaaccatagc tcagtactac aaacatgagt taccgaatta cggcgttttt gatgaaaagc
      601 gctattttgt ggctgggcat gaagcctgtg tattcgagca tgccggtatt cggtttggcc
      661 tcaacatttg cgaagacagt tggtttaaac gtgcaccgca ggctgcggtt gaggctggcg
      721 cgcaatgctt gcttgtgctc aatgcctcgc cgtttcacat gggtaagttc aatcatcgtc
      781 tagatatgat gcgacgttgt gtggacagag ccggcgtgag cctggtgtat gccaatttat
      841 gcggtgccca agatgaactg gtgtttgacg gcatgtcgtt tggattagat aagtctggcc
      901 attgcgttgg acacggaccg gcatttgatg aggcgttgtt gcacttggaa gtccatcctg
      961 gcggtggatt aagtaaagcc gaaggtccat ggacggcagt caccagcatg gaagaagaag
     1021 ctgagcacga tcatctgtca ttgacttggc aggcgcttgt gacgggcgtg cgcgattatg
     1081 ttcacaaaaa cggctttaag tctgtggtgc tgggcttatc tggtggtctc gactcggcag
     1141 tggtgcttgc cattgccgtt gatgcgcttg gggccgacca ggtgatgacg gtcatgatgc
     1201 cttcggctta caccgccgat atttcactga ccgatgccgc agacatggca acgcgtgtgg
     1261 gtgtgcgcta cgagcaggtc gccattggtg agatcacagg gcagtttgaa agtgcactgg
     1321 cacctttgtt tgccggcaca tcggctgata ccaccgaaga aaacattcaa gcccgtgtgc
     1381 gtggcacgct gctcatggca ctatcgaaca agtttggttc gctcgtgctg accactggca
     1441 ataagtccga attaaccacg ggttactgca cgctgtatgg cgacatggca ggcggcttct
     1501 ctgtctttaa agacgtccct aaaaacctgg tgtatcgctt ggcgcgttgg cgtaaccaaa
     1561 caaccgaggt gatcccagag cgcatcatta cccgtgcgcc ttcggctgaa ctaagaccgg
     1621 atcagaccga tcaggactct ttgccgtcct acgaggtgat tgacagcatt atctccggct
     1681 atgtcgatca caacttgcct gtttcacgcc tgatcgagtc gggtctagac gcccaagcgg
     1741 tacatcaggt cgtgcgctta ttgcgtatca atgaatacaa acgccgccaa ggtgcgcctg
     1801 gcccgaagat caccgtgcgc gcgttcgggc gcgattggcg ctatcctttg tctaatgcat
     1861 ttcgcgaaac cggcccaacc tagagccgca acctaacagg gagacgtcgt gaaactcgtc
     1921 actgccatta tcaaaccatt caaactcgat gaagtccgcg aaggactctc agaagtgggc
     1981 attaccggtc tgaccgtcac cgaaatcaag ggatttggcc gtcaaaaagg gcacaccgaa
     2041 ctctatcgcg gtgccgaata cgttgtggat ttcttgccca aaatacgcgt cgaagtcgcg
     2101 gtatcagacg aacaggttga acctgtgatt gaagcgatca tcaaagccgc tcgcaccggc
     2161 aaaatcggtg acggcaagat ttttgtcacg ccgctcgatg aagtggtccg cattcgtacc
     2221 ggcgagcagg gtgacgaggc tttgtaagca ttaagtgacg gtagttggtg ttgattggtg
     2281 ctaattgatg ttggtagacc gttgcccaag cgctattagc cttatccaag cgctaccgaa
     2341 gcgaagcgtc gtcgacgcat gctttgacct actcagttaa aactaatttt aaaaatagaa
     2401 agcagcagca tgaaaccttt tgaatggcat aacccgtacc ctagcgttcg tattcccctt
     2461 tttgcgcgca acgtggtgtc aacctcgcat ccgctagcag cgcaagccgg tgtacgtatt
     2521 ctttatcaag gtggcaacgc cgtggatgcc gcaatcgcag cggcagccgc cattactttg
     2581 gtcgaacccg tttcatgtgg ccttggcagt gatgcctttg ccattgtgtg gcatgagggc
     2641 aaagcccatg gtctgaatgc ctccgggcat tcgccggcgg cttggaatgt ggactacttt
     2701 gcccagaaat atggtctgga tgcgcaaggg ctggcgaacg cacccaagcg cgg
//
LOCUS       DATBNL010000016         4148 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_89905, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000016 DATBNL010000000
VERSION     DATBNL010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4148
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89905"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            287..766
                     /gene="ssb"
                     /locus_tag="VIC30_00265"
     CDS             287..766
                     /gene="ssb"
                     /locus_tag="VIC30_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003806953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEY7802860.1"
                     /translation="MASVNKVILVGNLGRDPEVRYSPEGSALCNISIATTSNWKDKNT
                     GERREETEWHRVVMYNRLAEIAGEYLRKGRPVYIEGRLRTRKWQNKEGQDVYTTEVIA
                     DQMQMLGSRDGGGEGGGQGGDFEGGGRPASRPQAQRPAAPASGSSANLGDLDDDIPF"
     gene            complement(891..1457)
                     /locus_tag="VIC30_00270"
     CDS             complement(891..1457)
                     /locus_tag="VIC30_00270"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEY7802861.1"
                     /translation="MKPVVVFDSSVLLLAIHPNVAIPKDPFTQEPLKLARERVEFLIK
                     KLAAQKSKIVIPSPTLSEVLVHAGDGTQNYIDILHRPPFAVAPFGTRAAVDCALAIRR
                     YGSKSFDRTTTRAKLKFDRQIISIAQTNGAKTIYSDDADIYKYGKQVGISVVRTHELD
                     VAAEDKQIPLDLDKQNRGDGHPTMRAAT"
     gene            complement(1467..2195)
                     /locus_tag="VIC30_00275"
     CDS             complement(1467..2195)
                     /locus_tag="VIC30_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802862.1"
                     /translation="MSHETFALKIEALSPQSIPMNRLARYMLEFAGLMGCVEHVRFEG
                     VSAGSTIVRAQVHTDIAPLIAARIQAISSNKADANVLKYFDAINDLLREDQTRGCLVQ
                     SDRSLIAFQGAEIKVGAGIGPIKETGDLTGQLISVGGKDQTKHVRIMSQHGEIYRLET
                     RNIELAKALAKHLFSLVRVNGSGTWHQDSCGNWKLERFVAESFETLDDTDLITAMQAL
                     RQTEGDGWREVPDPQDVLKKLRKG"
     gene            complement(2389..>4148)
                     /locus_tag="VIC30_00280"
     CDS             complement(2389..>4148)
                     /locus_tag="VIC30_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011616564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEY7802863.1"
                     /translation="ARAHGMRLIGPNSLGMVIPRIHFYGSFATGLELGFPEPGHVGIV
                     SQSGAYGAHLMTAAVASGIGLSMMVMTGNEADLTLGDVVNMLVDDPNTKVIALYSEGI
                     RQSATLVSALERAREHKKPVVIMKVGQSALGQAAALSHTASVAGNDRVFDAVMAELGV
                     IRVQTTEQMLDIARLATRGIFPENNTLGVFTVSGGAGVIISDAAASHGLAMPAMPQPA
                     QDRLRELLPFCTPTNPVDTTAQVLNDMSLLTTFTESLVVDGNYQSILGFVTYTATAAT
                     SGERVREALKSVAQSHPDRLYVLNAMGDAEKLKRYEENGFTIFEDPSRAVAAISAMGR
                     YGQAFAEKPKQVAPTMPPIELPADTPSEAQAKALLSQAGIAVVPETVCTKADAAVAAA
                     ATLNEPVVMKIVSPAILHKTEIGGVLLNVDGEKAVREGFECLIERAKAHAPQARIEGV
                     LVAKQITGGVQCLLGVQQDPVFGPMAVFGLGGIFVEVLDDVVLHRCPFGEDVAMQMIQ
                     GIRAAPLLFGTRGQPKADVQALATMLAKLSAFAVAAGPRLQSIDLNPVFAMPEGQGAF
                     AADAVITLNDAGGKNETLA"
BASE COUNT          948 a         1067 c         1128 g         1005 t
ORIGIN      
        1 tgcggtgttt tgggtgatcg cggggttgag tgcggtatgg ctagcggtga cgtggcgttt
       61 gaccctgccg gcggccgcgc ccaagcccgc gcaggctgcc caaacagacg ccgaatcggt
      121 tgcctgagac ggttgtctga gagggtcgca tcgtagccgc tattgtggaa tacactgatg
      181 ggtatcagct tgatcgcgac ggcaatagac cgtcagattc aggcaccata acgtcattgc
      241 gatttgtctc gcaagcacaa tttaattttt aagaagggag atctcagtgg catcggtcaa
      301 taaagtgatt ctggtgggca atcttggtcg tgatccggaa gtgcgctaca gcccagaggg
      361 cagtgcgcta tgcaatatct cgattgcaac cacgagcaat tggaaagaca aaaacactgg
      421 cgagcgtcgg gaagaaaccg aatggcatcg cgtggtgatg tacaaccgct tagctgaaat
      481 tgcgggcgaa tatttacgta agggccgccc ggtctacatt gaaggtcgcc tgcgcacgcg
      541 caagtggcaa aacaaggaag gccaggatgt ctacaccact gaagtgattg ctgatcagat
      601 gcaaatgctc ggcagccgtg atggtggcgg tgaaggtggt ggtcagggcg gtgactttga
      661 gggtggcggt cgtccggcct ctcgtccaca ggcccaacgt ccggcagcac cagcctcggg
      721 tagcagcgcc aatctaggtg atttagacga cgatattccg ttttaagcag ttttttagag
      781 tttttcccgg catttatcgt cagtttcggc gagtgaagta aaaaaatccc agtcaacatg
      841 catggctggg atttttttga cttttttcgt acctaggcct gagcagaaaa ctaagttgcg
      901 gcgcgcatcg taggatgacc atcgccacgg ttttgtttgt ctaggtccag aggaatttgt
      961 ttgtcttcgg cagcgacgtc aagttcgtga gtgcggacaa ccgaaattcc cacttgctta
     1021 ccgtacttgt aaatatcagc gtcatccgag taaatagttt ttgcaccgtt ggtctgagca
     1081 atcgatatga tctgtcggtc aaattttagt ttcgcacgcg tagtggttcg atcaaacgac
     1141 tttgatccat agcgcctgat agcaagggcg caatcgaccg cggctctcgt gccaaatgga
     1201 gcaacagcga aaggcggtcg atgcaggatg tcaatgtaat tctgtgttcc gtcgcctgca
     1261 tgcactagaa cttcggatag tgttggtgat ggaatgacga ttttggactt ttgtgcagca
     1321 agctttttga ttaagaactc cacccgctcg cgtgctaact tcagaggctc ttgggtgaaa
     1381 ggatccttcg gaatcgcaac attagggtgg attgcgagca gcagcacact cgaatcgaat
     1441 acaacaacag gtttcattag caatctctag ccttttctga gcttttttaa gacatcttgt
     1501 ggatccggga cttcgcgcca gccgtcacct tcagtttggc gcagtgcctg catggctgta
     1561 atgagatcgg tgtcatctag tgtctcgaag gattcggcaa caaatctttc gagcttccag
     1621 ttgccgcaac tatcttgatg ccatgtgccg ctgccattaa cgcgtacgag agaaaacaaa
     1681 tgtttggcaa gcgcttttgc aagttcaata ttccgggtct ctaggcgata gatctcacca
     1741 tgttgtgaca tgattctcac atgcttagtt tgatctttgc cacccacgga gatgagttgc
     1801 cctgtcagat caccggtttc ttttattggg ccgatacccg caccaacctt tatttccgca
     1861 ccttgaaacg cgatgagtga gcgatccgac tgaactagac agccccgagt ctgatcttct
     1921 cgaagtaagt cgttgatcgc atcaaaatat ttcaagacgt tcgcatcggc tttgttgctg
     1981 ctaattgctt ggattctcgc tgcaatgagc ggagcaatat cggtgtgtac ttgggcgcga
     2041 acaatagtgc tgccggcgga taccccttca aaacgaacgt gttcgacgca gcccatgagt
     2101 ccggcaaact cgagcatata tctagcgagt cgattcattg gtatcgactg cggcgacagt
     2161 gcttcaattt ttaaggcgaa ggtctcgtgg ctcattcggg tgtttggtta gtggtaagag
     2221 atgcgaggtt cgaaagtctg atgcatcatg ccactggaca ggtctgggcg cggcacgtca
     2281 acacctttta ctgctgttta cctaaacgca tttttggcaa tttaagcgcc tactaacttg
     2341 tcatttactt accaaaaaca caatggaatt ctaacacttc actttctctt atgcgagggt
     2401 ctcgtttttg ccacccgcat cgtttaaagt gatcaccgca tcggcggcaa acgcgccttg
     2461 cccttcgggc atggcaaaca ctggatttaa gtcgatcgat tgcagacgtg gaccggcggc
     2521 caccgcaaaa gcagagagct tagcgagcat ggtggccaag gcttggacgt cggctttggg
     2581 ttggccgcgg gtgccaaaca gcaagggtgc agcacgaatg ccttgaatca tctgcatggc
     2641 cacgtcttca ccaaacgggc aacggtgcag cacaacatcg tctaacactt cgacaaagat
     2701 cccacccaga ccaaacacgg ccatcggtcc aaacacagga tcttgttgca cgcccaagag
     2761 gcactgcaca ccgccggtga tttgtttggc cacgagcacg ccctcaatcc tcgcttgggg
     2821 tgcgtgtgct tttgcacgtt cgataaggca ttcgaatcct tcacgcacag ctttctcacc
     2881 gtcgacgttt agcaacacgc caccgatttc cgtcttgtgc aaaatagcag gcgatacgat
     2941 tttcatgacc accggctcat tcagtgttgc tgcggcagcg accgccgcat cagctttagt
     3001 gcacaccgtt tcaggtacca cggcaatgcc agcttgtgac agcagagcct tggcttgcgc
     3061 ttcgctcggc gtatcggccg gtagctctat gggcggcatt gttggtgcga cttgcttagg
     3121 cttttcagca aacgcctgtc cgtaccgccc catggctgag atggctgcca ctgcccggct
     3181 gggatcttca aatatagtga aaccgttctc ttcgtagcgc ttgagtttct cagcatcacc
     3241 catggcattg agcacataga gtcgatcagg gtgagattgg gcaaccgact taagtgcctc
     3301 gcgtacccgc tcgccactgg ttgccgcagt cgctgtatag gtcacgaagc caaggatcga
     3361 ttggtaattg ccatcaacga ccagcgactc ggtgaacgtg gtcaacaatg acatgtcgtt
     3421 taagacttgc gcggttgtat ccaccggatt ggtcggtgtg caaaacggca gtaactcgcg
     3481 taagcgatcc tgggcgggtt gtggcatggc aggcatggcc aggccgtggc tagccgcggc
     3541 atcggaaatg atgacgccgg cgccaccact gacggtaaac acaccaagcg tattgttttc
     3601 agggaagatg ccgcgcgttg ccagacgcgc aatgtcgagc atttgctcag tggtctgcac
     3661 tcgaatgaca ccaagctctg ccatgaccgc atcaaacacc cggtcgttgc cagctaccga
     3721 agcggtgtga gacagtgcgg ctgcttgtcc gagcgcactt tgtccgacct tcatgatcac
     3781 cacaggcttt ttgtgttcac gggcgcgctc aagcgcactg accaaagtgg cggattgacg
     3841 tatgccttcg gaatacagtg cgatgacctt ggtgttggga tcgtcaacca gcatattgac
     3901 cacgtcacca agcgtgagat cggcttcgtt gccagtcatc accatcatgg aaagtccgat
     3961 gcccgaggcg acagccgcgg tcatcagatg tgcgccatag gcgcctgatt gactgacaat
     4021 cccaacgtga cctggctctg ggaaaccaag ctcaagacca gtggcaaagc tgccgtagaa
     4081 atgaatcctc gggatgacca tgcccaaaga gtttggacca atgagtcgca tgccatgcgc
     4141 acgcgcaa
//
LOCUS       DATBNL010000017         1637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_169546, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000017 DATBNL010000000
VERSION     DATBNL010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169546"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VIC30_00285"
     CDS             <1..651
                     /locus_tag="VIC30_00285"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEY7802864.1"
                     /translation="AFSATVMRYLDEFVSKATSLSTIGGVFLFITSLLVIMSIDDALN
                     DIWHIKRQRPIGQRLLIYWAVLSLGPIVLGASLWASSSMVQQALSFQEPGAWVPWRTL
                     AAWLPFVMSWVGCTLLYLTVPNCTVGYTPALVGGFVSSILFQVIKFGLGLYLANIPTY
                     TVIYGAFSVLPTFLVWIYMSWLAFLFGAVVAANLPRGLTQNRVDVHAHHDNLATDP"
     gene            698..1135
                     /locus_tag="VIC30_00290"
     CDS             698..1135
                     /locus_tag="VIC30_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017685693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY7802865.1"
                     /translation="MLKVSEILRVKGNTLFTATPDMAVREAINTMSEHDIGSLVVMEH
                     GELAGMLTFREILRHLHANNGTIGESTVRAIMDDAPLSVTPNTDADELQRLMLSKHSR
                     YMPVMDGPTLMGVISFYDLAQAIVAAQAFENDMLKAYIRDWPT"
     gene            complement(1191..>1637)
                     /locus_tag="VIC30_00295"
     CDS             complement(1191..>1637)
                     /locus_tag="VIC30_00295"
                     /inference="COORDINATES: protein motif:HMM:NF013380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEY7802866.1"
                     /translation="PPLRFDQAAALKSDFPEAVFVVNGGLVTVDASVTALDTFDGVML
                     GRAAWHDPMILDHLSVALGHRAEHAVDEDIVQAMVQYAAQQVDLGVPLRVIARTLLGF
                     AQGRRGARKWRQMLSDQALLNDNDPALIWQAWQHINARATPVQEPV"
BASE COUNT          354 a          443 c          424 g          416 t
ORIGIN      
        1 gcattttcag ccaccgtgat gcgttatctc gacgaatttg tcagcaaagc cactagcctg
       61 tcgaccatcg gtggtgtgtt tttatttatc acatcgctgc tagtcatcat gtcaattgat
      121 gatgcgctta atgacatttg gcacatcaaa cgccagcgcc ccatcggaca gcgtttgctg
      181 atctattggg ctgtgctgag cttgggtccg attgtgcttg gtgccagcct ttgggcctca
      241 tcgtccatgg tgcagcaggc gctctctttt caagagcctg gtgcctgggt cccttggcgc
      301 acgttggcgg cgtggttgcc gtttgtcatg agttgggtcg gttgcacctt gctttattta
      361 acagttccca attgcacggt cgggtatacg ccagccttgg tcggtgggtt tgtcagtagc
      421 attctgtttc aagtcatcaa gttcggactt ggcttgtact tggccaacat tccgacttac
      481 accgtgattt acggtgcttt ttcggtctta cccacgtttc ttgtgtggat atatatgtct
      541 tggctggctt tcttgtttgg tgcggtcgtg gcagctaact taccacgtgg tctaacgcaa
      601 aatcgggtcg atgtgcacgc gcatcatgac aatctcgcca cagaccccta aaatcagaac
      661 atcatcattt cgtgcgcgca cagttggggg tggttcaatg ctcaaagtca gtgaaattct
      721 cagggtcaag ggtaatacct tgttcacagc cacgccagat atggccgtgc gtgaggccat
      781 caacaccatg agtgaacacg acattggctc gctggtggtt atggagcatg gcgaacttgc
      841 tggcatgttg accttcagag agatcttgcg ccacctgcac gcgaacaacg gaacaattgg
      901 cgagtccacc gtgcgtgcca tcatggacga tgccccgctg agcgtgacgc ccaacaccga
      961 tgctgacgaa ctgcagcgat tgatgctgtc caaacactcg cgctacatgc ccgttatgga
     1021 tggtcccacg ctcatgggcg tgatttcgtt ctatgacttg gcccaagcta tcgttgcagc
     1081 tcaggccttt gaaaacgaca tgctgaaggc ttacattcga gattggccaa cctaagaaat
     1141 ctctgtgtag gcaatttcta ttcaagcaat tttgttcaag caggaatgtt ttagaccggc
     1201 tcttgaactg gcgtggcacg tgcattaatg tgctgccagg cctgccaaat aagcgccgga
     1261 tcgttgtcat tgagcaacgc ctggtcagac aacatctggc gccatttacg tgcgcctcga
     1321 cgcccttgag cgaaccccag taacgttcgc gcaatcacgc gcagcggcac acccaagtcc
     1381 acctgctggg ctgcgtattg caccatggct tgaacgatgt cttcatctac ggcatgttca
     1441 gcccggtggc caagcgcaac cgacaagtga tcgagaatca tagggtcatg ccaagcagcc
     1501 cgcccaagca tcaccccatc aaacgtgtct aatgcagtga cgctggcatc aacagtgacc
     1561 agaccaccat taaccacgaa cacagcttct gggaaatccg atttcagcgc agccgcctga
     1621 tcaaatcgca gcggagg
//
LOCUS       DATBNL010000018         2380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_169554, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000018 DATBNL010000000
VERSION     DATBNL010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169554"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /gene="minC"
                     /locus_tag="VIC30_00300"
     CDS             complement(<1..375)
                     /gene="minC"
                     /locus_tag="VIC30_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015201.1"
                     /note="blocks the formation of polar Z-ring septums;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEY7802867.1"
                     /translation="MTAPAALEFKSATLYALRAVLHSQDTDTIIASLAQRMADAGSFF
                     AGEAVVIDATGLETAPDWNELLEAFSSHQLPVIGVVAGTEIAQSALEFGLAHVELSAA
                     TSKTTRAPQSAVEVSEPVQDPTP"
     gene            complement(403..2175)
                     /locus_tag="VIC30_00305"
     CDS             complement(403..2175)
                     /locus_tag="VIC30_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEY7802868.1"
                     /translation="MTEHHNEASTSNFLRQIIEADLKANRFGDKRWAKPPATASDLAQ
                     APPDPARIRTRFPPEPNGFLHIGHAKSIWVNFGMAQHYGGVCHLRFDDTNPEKEEQAY
                     VDAIKDAVKWLGYDWQHQDQSNLYFASDYFEVMYQFACALIKANLAYVDEQSADEMRA
                     NRGTLTSPGTDSVWRNRPAEESLQRFEEMRAGKHADGSMALRARIDMGAANINLRDPV
                     IYRIRHAHHHRTGDAWCIYPMYSWAHPIEDALEGITHSICTLEFEDQRPFYDWSLNTL
                     ADLGLLNRPLPHQHEFARLNMSYVVTSKRKLLQLVQEGHVDGWDDPRLPTLAGLRRRG
                     YTASAIRLFCERTGVSKANSRIDYSVLEQALRDDQDPQAPRAVAILDPVKLVITNLPA
                     DEVVMCQAPRHPHLPELGQREFAFTRELWIERDDFMQEPPKKYFRLFPGNQVRLKYAF
                     VVTCTGCVTDDAGKVTEVHAEYLPDTRSGTPGADAVKVKGTVTWVSAAHAIAAKIRLY
                     DRLFTEAYPDAGESHFLDHLNPNSVQTVNGWLEPGIDLTTPVWQFERLGYFAPDAQAS
                     EDGLPAINRVTTLKDAWATQQKKS"
BASE COUNT          488 a          640 c          701 g          551 t
ORIGIN      
        1 cggcgtgggg tcttgcaccg gctcgctaac ttcgacagca gactgcgggg cgcgcgtggt
       61 tttagaagtg gcagcagaga gctcaacatg tgccaaaccg aactcaagtg cgctttgggc
      121 gatttcagtg cctgccacca caccaataac aggtaattgg tgactagaaa aggcttctag
      181 taattcgttc cagtcaggtg cggtctcaag gccggtggca tctatcacca cggcttcacc
      241 ggcaaagaaa ctgccggcgt cagccatacg ttgcgccaaa gaggcgatga tggtgtcggt
      301 gtcctgactg tgcaacacgg ctcgtagggc atacagtgtg gcacttttaa attcaagggc
      361 ggcaggcgcg gtcatatggg tttgtcttta gggttgcgtt aatcaggatt tcttttgttg
      421 ggtggcccag gcgtctttta aggtcgtcac gcgattaatg gcaggcaggc cgtcttcgct
      481 agcctgcgca tccggcgcga aataccccaa gcgctcaaac tgccatacag gcgttgtcag
      541 gtcaatgcca ggctcgagcc aaccgttgac cgtttgcacc gagtttggat tcaagtgatc
      601 cagaaagtgg ctttcgccag catccgggta ggcctcggta aataagcgat cgtacagcct
      661 gattttagcg gcgatggcgt gtgcggcact gacccaagtg accgtgcctt tgactttgac
      721 ggcatcagca ccgggtgtgc cgctgcgcgt atctggcagg tattcagcat ggacttcagt
      781 gactttgccg gcgtcatcgg tcacgcaccc cgtgcaggtc accacaaagg cgtacttcag
      841 gcgcacttgg ttgccgggaa agaggcgaaa gtatttcttt ggcggctctt gcatgaaatc
      901 atcacgctcg atccacagct cacgcgtgaa cgcaaactcg cgctgtccca attcaggcaa
      961 gtgtggatgg cgcggggcct gacacatcac cacttcatca gccggcaaat tggtgatcac
     1021 gagtttgacc ggatcgagga tggccaccgc gcgcggggct tgtgggtctt gatcatcgcg
     1081 caaggcttgt tcgagcacgc tgtaatcaat acgtgagttg gctttggaga caccggttcg
     1141 ctcgcagaac aagcgaatcg ctgaagccgt gtagccgcgg cgacgcaagc cagccaaggt
     1201 tggcaggcgc gggtcatccc agccatcgac atggccttct tgcacgagct gcagcagctt
     1261 gcgcttgctg gtgacgacgt agctcatgtt caaccgtgcg aactcatgtt gatgcggcag
     1321 cggccgattc aagagcccaa ggtcagccaa ggtgtttagg ctccagtcat aaaacggacg
     1381 ctggtcctca aactcgaggg tgcagatact gtgtgtgatg ccttctaatg cgtcttcgat
     1441 cggatgcgcc cagctgtaca tggggtagat gcaccaggca tcgcccgtgc ggtgatggtg
     1501 ggcatggcgg atacgataga tcaccgggtc acgcaggttg atgttggctg cgcccatgtc
     1561 aatccgggct ctaagcgcca tggacccatc ggcatgtttg ccggcacgca tttcttcaaa
     1621 tcgctgcaag gattcctcag ccggccggtt gcgccagacg ctatcggtgc caggcgaggt
     1681 caatgtgccg cggttagcac gcatctcatc agcactttgc tcatcgacat aggccaggtt
     1741 ggccttaatc aacgcgcagg caaactgata catcacttca aagtagtcgc tcgcaaagta
     1801 caggttggac tggtcttggt gctgccagtc gtagcctaac cacttgacgg catctttgat
     1861 ggcatcgacg taggcctgct cttctttttc tgggttggtg tcatcaaaac gtaaatgaca
     1921 gacaccccca tagtgctgcg ccatcccgaa attaacccaa atgctcttag cgtgaccaat
     1981 atgtaaaaac ccattgggct caggcgggaa ccgcgtgcgg atccgtgctg gatcgggagg
     2041 agcttgcgcc agatcgctag cagtggccgg cggctttgcc cagcgcttgt caccgaaacg
     2101 gttggccttt aagtcggctt caatgatctg ccgaaggaag ttcgaggtcg aggcctcgtt
     2161 gtgatgctct gtcatgggga tgttgcgttt gcctggttgt gcttttggct aaagtcacat
     2221 tttgccacgt ccggtctaca ctaacgtccg atatgcaaga aatccaactt cttctggtgc
     2281 agttgcaaac gcttgccgcg gaaatggcct ttcagatcgt ggctgtgctc ggtttgggcc
     2341 tggtctggct agccgtggcg tttgatgcca cccgcctgac
//
LOCUS       DATBNL010000019         2818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_109823, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000019 DATBNL010000000
VERSION     DATBNL010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2818
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109823"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1496
                     /locus_tag="VIC30_00310"
     CDS             <1..1496
                     /locus_tag="VIC30_00310"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEY7802869.1"
                     /translation="GAATSVRLRAQYFDTPDADLAKAGVALRLRLEGRRWVQTLKMPG
                     GHQLEKIELNAARPGPSLDLSVFSDSPAKRIIAKHGDKLAMVYETDVQRLFRRIRTPA
                     GMVEVALDRGHIQAGELKLPVSEVEFELVSGQPHAMFLLGLKWLSAYGLVLDLRSKAE
                     RGTTLAALANRLANLGQLEDAATVATRAKAVASYWAPRGASAIKLHRDMTCPQALSAV
                     TMECLHQIARNAAVLAEIDTAGHYRAGNPEHTHQLRVGIRRLRSAWSLFQKLSPLPPQ
                     PWREELKAHFAALGDARDDDVLRETVMPELSAAGQPPLELAGQSEQAPSMSITKSVAF
                     QRWLVELLAWTIGAHPLQADTETPEASTDTSSKTPDLHAALSKQLYKWHQRVLTDGLK
                     FVDLPLEAKHEVRKRGKRLRYGLQFAESLLPAKKLKNYRRSLAQVQDILGEMNDLYVA
                     REKFEGMRDDQPSAWFAVGWIASRLSVLDKNAQAAFKRLAQADHFWG"
     gene            complement(1519..2676)
                     /gene="ftsY"
                     /locus_tag="VIC30_00315"
     CDS             complement(1519..2676)
                     /gene="ftsY"
                     /locus_tag="VIC30_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEY7802870.1"
                     /translation="MFRFFRKKQPTPTPDQSSAADHVEPTEAKPTSNQDDHAPRPIIA
                     DETAPVIDSTAPLAAPAVELVSESEPEPEPKSDASAPPAKQSWMRRLRQGLARTSIGG
                     LFAGSAVDEALFEELESALIMADAGVNASTAIMQTVRQRVRKERLESADEVRSALCDV
                     LAEHLTPLQKSFDVGSVKPLVVMIAGVNGAGKTTSIGKLAHALQANGAKVLLAAGDTF
                     RAAAREQLMEWGNRNNVSVIAQEGGDPAAVAFDAVAAGHARQMDVVMVDTAGRLPTQL
                     NLMEELKKIRRVIHKADQTAPHEVLLVVDGNTGQNALAQVKAFDEALGLTGLVVTKLD
                     GTAKGGVLAALAAGAQGCRPVPVYWIGVGEQLEDLQPFVPREFAQALVGLD"
     gene            2678..>2818
                     /locus_tag="VIC30_00320"
     CDS             2678..>2818
                     /locus_tag="VIC30_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009454775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HEY7802871.1"
                     /translation="MAKYIRIVGGQYRRTPIDVPDVSGLRPTPDRVRETLFNWLNHLW
                     QGE"
BASE COUNT          623 a          844 c          757 g          594 t
ORIGIN      
        1 gtggcgctgc taccagtgta cgcctgcgcg cccaatattt tgatacgccg gatgctgatt
       61 tagcgaaagc tggcgttgct ttgcggctac gccttgaggg gcgtcggtgg gtacaaaccc
      121 tcaaaatgcc tggtgggcac caactggaaa aaattgagct caacgccgcc cgccccggcc
      181 caagcctaga tctctcggtt tttagtgact ccccggccaa acgcatcatt gcaaaacatg
      241 gcgacaaact tgccatggtt tatgaaaccg atgtgcaacg actgtttcga cgcatccgca
      301 cgcctgccgg tatggtcgaa gtcgcacttg accgtggcca tattcaagca ggtgaattaa
      361 aactgccggt ttccgaagtt gaattcgaac tcgtttcagg tcagccacac gccatgtttt
      421 tactgggttt gaagtggcta agcgcctacg gtctggtgtt ggacttgaga agcaaagctg
      481 agcgtggcac gacactagcg gcgctagcca accggctggc caacctcgga cagctcgagg
      541 acgccgccac agtagccacc cgcgctaagg ccgtggcgtc atattgggca ccgcgcggcg
      601 ctagcgccat caaactgcat cgcgacatga cctgccctca agccctgtct gccgtgacca
      661 tggaatgctt gcaccaaatc gctagaaatg ccgccgtact agcggagatc gacaccgctg
      721 gtcattaccg tgccggcaac ccagagcaca cacaccagtt gcgcgttggc atccggcgcc
      781 tgcgttcagc ttggtccttg tttcaaaaac tctcaccact gccaccacaa ccttggcgcg
      841 aggaactcaa ggctcatttc gcggcgcttg gcgatgctcg cgatgatgat gtgcttagag
      901 aaaccgtgat gcccgagctc agtgccgccg gccaaccacc gctcgaactc gctggccaaa
      961 gcgaacaggc gccttcgatg agcatcacta aaagtgtggc atttcaacgc tggctcgtcg
     1021 agctgttagc ttggaccatc ggggctcacc cactacaagc tgacaccgag acacctgagg
     1081 cttcaacaga caccagcagt aaaacgccag acctacatgc tgcgcttagc aaacaactct
     1141 acaagtggca tcagcgtgtg ctgaccgatg gcctgaagtt tgtcgacctg ccgcttgagg
     1201 ccaagcatga ggtcaggaaa cgcggcaaac gtctgcgcta cggtctgcag tttgccgagt
     1261 cgttgctgcc cgccaaaaaa cttaaaaact atcggcgcag cctagcccaa gtgcaggata
     1321 ttctcggtga aatgaacgat ctatatgtcg cccgggaaaa gttcgaaggc atgcgtgacg
     1381 atcagccctc agcttggttt gctgtaggtt ggatcgcttc ccgcttgagc gtgctggata
     1441 agaacgcgca agccgccttc aagcgcttgg cccaagccga ccacttctgg ggctagccag
     1501 gagacagatt gggtttagtc agtccaagcc aactagtgct tgcgcaaact cgcgcggcac
     1561 aaacggctgc aaatcctcaa gctgttcgcc tacgccgatc caatagaccg gcaccgggcg
     1621 acagccctga gcgcccgcgg ccagagctgc aagtacgccg cccttggccg tgccatcaag
     1681 cttggtaaca acaagtcccg tcagacccaa ggcttcatca aacgctttga cctgagccag
     1741 cgcgttttgt ccagtattgc catccaccac aagcagtacc tcgtgcggtg ctgtttgatc
     1801 ggctttgtga atcacgcgac ggattttttt tagctcttcc atgagattga gctgggtggg
     1861 caagcgacct gcagtatcaa ccatcaccac atccatctgc ctggcgtgcc cagcggccac
     1921 ggcatcaaac gccaccgctg caggatcgcc accttcttgc gcaatcaccg atacgttgtt
     1981 gcgattaccc cactccatga gttgctcccg agcagcggca cgaaacgtat cacctgcggc
     2041 caacaatacc ttggcaccat tggcttgcag agcatgcgca agcttaccaa tcgaagttgt
     2101 tttaccggcg ccattgacac ctgcaatcat gaccaccagc ggtttgaccg agccgacatc
     2161 gaaacttttc tgcagaggcg ttaagtgttc agcgagcaca tcacacagtg ccgaccgaac
     2221 ttcatcggcg ctttcaaggc gctctttacg cacccgctga cgcacggtct gcatgatggc
     2281 cgtgctggcg ttgaccccag cgtcagccat gattagcgct gactcaagct cttcaaacaa
     2341 agcctcgtca accgcgctac ccgcaaacaa gccaccaatg ctggtgcgtg ccaacccttg
     2401 gcgcaagcgt cgcatccagg actgcttggc cggtggcgct gatgcgtcag atttgggctc
     2461 gggctcaggt tcagattcag ataccaactc aacagcgggt gccgccaaag gcgctgttga
     2521 atcgattacc ggtgcagtct catcggcgat aatgggtcta ggcgcatgat catcttggtt
     2581 actcgtcggt ttggcctcgg ttggctcgac gtgatccgcc gctgatgatt gatcaggtgt
     2641 cggggtgggc tgttttttgc ggaagaatct gaacataatg gcaaagtata ttcggatcgt
     2701 cggtggtcag tatcgtcgca cgccaattga cgtgcctgac gtgtcaggat tgcgcccgac
     2761 acctgaccgg gttcgagaga ccctctttaa ctggctcaat cacctctggc agggcgag
//
LOCUS       DATBNL010000020         2596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_99902, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000020 DATBNL010000000
VERSION     DATBNL010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99902"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(422..1564)
                     /locus_tag="VIC30_00325"
     CDS             complement(422..1564)
                     /locus_tag="VIC30_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802872.1"
                     /translation="MMSFKQSATNAQKQLEKQSRRKRGVIALSLLPALLALQINAALA
                     ALYLALLGGVLVLRFYLHRQRMDGQSVSTVSAASSSASSVASSAASSAASSATNNGPV
                     QLQGHLLGDVVKSPMTASDCVFWRLEFHAQQDSTNNDHRVLVATVFSRPYVAFSDETG
                     VAWIRAQDVDWHLHTKQGKIFAQASDMGEFESWLGHGFVDRWYEQCHARPIKYASDWM
                     VVETLVRADTPLFVEGHIQKRRSNQTDFDDPSQTGLQGSPVDRALANEPIVCVHQSQA
                     GDNELSLKQAWVGVLQQIEGHQLGGSSGESLSGSHEINVLTRGSDAKASLEIYEGSKA
                     NGRRLLSTKMHLSLGLVAISLAYLAVMGPEQLPAAIEQLKGFFAQS"
     gene            complement(1623..>2596)
                     /locus_tag="VIC30_00330"
     CDS             complement(1623..>2596)
                     /locus_tag="VIC30_00330"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4143 domain-containing protein"
                     /protein_id="HEY7802873.1"
                     /translation="LKLAIDSDRRPGRFLLTGSANVMSLPTISDSLAGRIEVHALLPL
                     SNAEIANRKPDFLDRALAQNWSAPRSDAAPLVGPALVEHVCSGGYPEMRSRETMRRRH
                     AWAQSYLATIIERDIQDVARIDDSARITQLMAILAMMSGQMLNLSQVGGQLGINGHTV
                     EKYITILEKLFLVRRLPAWRRNELTRLVKTPKIHFLDSGLHSALVRASPELLDTDRSR
                     FGSILESWVHGELLKTISLTQQQWFLSHYRDKDQVEIDFVLESPMRAILGIEVKASAT
                     VSSADFKGMRRLREYCGQAFVSGIVLYDGTEPVPFGDGLWAVPLNYL"
BASE COUNT          682 a          754 c          604 g          556 t
ORIGIN      
        1 tccatgcggt aaaaaccgag catcccagct gccaacccaa gcacaccaat gacaacgaac
       61 gcattgccaa tcaaggtcat gattctggag acagacttca gtacgggatg cgcctgggac
      121 atgatggtca acaactgatt agagttaaaa gtgggcttgg ttgcagcttg atagctcaga
      181 gttggcgagc cgcagccagc aaatggcacc tgatcatact ggtttttaag ggcaacctac
      241 ccaaatagcc tttgccagcg atatcgccga tttcggtgag caactaaaaa catcacaagc
      301 aatcccgcag cgcaggccac aagctaaaaa gcctgcccta actacgagca cctgtatgac
      361 tggcaaacat tgccatttcg atggctattt gcagcagtgc aacaccaata cggcaagcca
      421 atcaactttg agcaaaaaag cctttcaact gttcaatcgc tgccggtagc tgctcaggcc
      481 ccatgacagc caggtaagcc agcgaaatcg ctaccaaccc caatgacagg tgcattttgg
      541 tgctcagcaa tcggcgtccg ttggcctttg agccctcgta aatctcaaga gacgccttgg
      601 catcactgcc gcgcgtgagc acattaatct cgtgcgagcc cgacaaagat tctcccgaag
      661 acccgcccaa ctgatgaccc tcgatttgct gcagaacacc gacccatgct tgctttagag
      721 acaattcgtt gtcaccagcc tggctttgat gcacgcagac gataggttca ttggccaaag
      781 cgcgatcgac cggactgcct tgcaaccccg tttgacttgg gtcgtcaaag tcagtttgat
      841 tgctgcgccg cttttgaata tgaccctcaa caaacagtgg cgtgtctgca cgcaccaagg
      901 tttctacgac catccagtcc gacgcgtact tgatcggccg ggcatggcat tgctcgtacc
      961 aacgatccac aaagccatgg cccaaccatg actcaaactc acccatgtcg ctggcttggg
     1021 caaagatttt gccttgcttg gtatgcaggt gccaatcgac atcttgagct cttatccaag
     1081 ccacacccgt ttcatctgaa aacgcaacgt atggcctgga aaacacggtt gccaccaaaa
     1141 cacgatgatc attattcgtg ctgtcttgct gcgcatgaaa ctctaaccgc caaaacacac
     1201 agtcgcttgc agtcatcgga cttttaacca cgtcgccgag taaatgaccc tgcaattgaa
     1261 cggggccgtt gttagttgca ctgctcgctg cactgctcgc tgcactgctc gctacactgc
     1321 tagctgaact actagctgca ctaaccgtcg atactgactg cccatccata cgctgacggt
     1381 gcaaatagaa acgcagcacc aaaaccccgc caagcagcgc cagatataaa gcagcaagtg
     1441 cggcatttat ctgcaaagcc agcaaagccg gcagcaaaga caacgcgatc acaccacgtt
     1501 tgcgcctact ttgcttttct aattgctttt gcgcgttggt cgcggattgc ttaaaactca
     1561 tcatgaaacc tgcgaatcac cattcaacgg ataatcaaac acatataaaa accagcggcc
     1621 catcacaggt agttcagtgg cacagcccac aagccgtctc caaacggtac tggctctgtg
     1681 ccatcgtaga gaacaatgcc actgacaaac gcctgaccac aatattcacg taaacgccgc
     1741 attcccttaa agtcagcaga tgacactgtc gctgaagcct tgacctcgat accaagaatg
     1801 gctcgcatgg gcgactcgag cacgaaatcg atctcaacct gatccttgtc tcggtaatgc
     1861 gacaagaacc actgttgctg cgtcaggctg atagtcttca gaagctctcc atgcacccaa
     1921 ctttcaagga tcgatccgaa tctactgcgg tccgtgtcga gcagttcagg gctagcccgc
     1981 accagtgctg aatgcagacc cgaatcaagg aaatggatct tcggtgtctt gaccaagcgt
     2041 gtcaactcat tgcgccgcca tgcgggcaga cgtctaacta gaaacagttt ctccaagatg
     2101 gtgatgtatt tctcgaccgt gtgaccattg atcccaagtt gaccacccac ttggctcagg
     2161 ttcagcatct ggccagacat catggcaaga atggccatta actgcgtaat gcgcgccgaa
     2221 tcgtcaatac gagccacatc ctggatatca cgctcgatga tcgttgctaa gtaggattgt
     2281 gcccaagcat gacgccgccg catcgtctcc cgactacgca tttcgggata gccgccgcta
     2341 cagacgtgct caaccaacgc gggaccaacg agtggggcag cgtcagatct gggagcggac
     2401 caattctgcg cgagcgcccg atcaagaaaa tctggcttgc ggttggcaat ctcagcattc
     2461 gatagcggca gtaaggcatg cacctcaatt cgacctgcca agctgtcaga tatggtgggc
     2521 aaactcatca cgttggcaga cccagttaat aagaaccgtc cggggcggcg atcgctgtca
     2581 atagctagct ttaaca
//
LOCUS       DATBNL010000021         1918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_169576, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000021 DATBNL010000000
VERSION     DATBNL010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169576"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1170)
                     /locus_tag="VIC30_00335"
     CDS             complement(<1..1170)
                     /locus_tag="VIC30_00335"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEY7802874.1"
                     /translation="MSDKSRFDLVDPILAMPRPLKRLLVLALDALLCVAAVWLAFFLR
                     LDEWIRLYGDPFWRADWASALSVALAIPLFITHGFYRVIFRHANLIAVNMVARAFLFY
                     WIVFATIITVIGIPGIPRSVGVIQPMLLFIGVGLSRALAHYWLGGAYHRILKRTSLPR
                     ALIYGAGESGRQLAMAMANSQEMRVVGFLDDNVRLHGHVLHGLKIHNPRELEAIATDN
                     GVTTILLAIPSVTRHRRNQILAQIKAAKVSVRTLPSVTDLAQGKVTVSDLRELDIEDL
                     LGRDPVPPHEILLTKNTLDKVVMVTGAGGSIGSELCRQIIDTAPKKLILLDLSEHSLY
                     QIHAELEQRWQTKLAATGCLTAWQSEARLIPVLGSVRDETHMHDIMARFTPDTVYH"
     gene            complement(1287..1856)
                     /locus_tag="VIC30_00340"
     CDS             complement(1287..1856)
                     /locus_tag="VIC30_00340"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019112620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEY7802875.1"
                     /translation="MPWHKRLFDLLLALAALLLLSLPFFIVAILVKLTSPGPVLYWSQ
                     RVGRHNRLFAMPKFRSMRTDTPVVATHLLTNPDAYLTPIGSLLRRTSLDELPQLLSII
                     KGDMSFVGPRPALFNQNDLIEARTALGIDKLTPGLTGWAQVNGRDDLPIPQKVEFDRQ
                     YQIKQSFWFDIKIIWLTFVGVLRSDGVAH"
BASE COUNT          485 a          468 c          535 g          430 t
ORIGIN      
        1 atggtagacc gtgtccggtg tgaagcgcgc cataatatcg tgcatgtgag tctcatcgcg
       61 aactgacccc agcaccggaa tcaaccgcgc ttcggactgc caagcggtga gacagccagt
      121 ggcagccaac tttgtttgcc agcgttgttc gagttcggca tgaatttgat agagcgagtg
      181 ctcactgaga tcgagcaaga tgagcttttt aggggcggta tcgatgattt ggcggcataa
      241 ctcactgcca atggagccac cagcgcctgt gaccatcacc actttgtcga gggtattttt
      301 ggtgagcaag atctcgtgcg gcggcaccgg atcgcgacct aggaggtcct cgatatcgag
      361 ttctcgtaga tcggaaacag ttaccttgcc ttgtgctagg tcggtgacgc tgggcagtgt
      421 tctgactgag actttggctg cctttatctg tgccagtatc tggttgcgtc ggtgccgagt
      481 caccgaaggg attgccagta aaatcgtggt gacaccgttg tcggtggcga tggcctcaag
      541 ctctcgcggg ttgtgtatct ttaaaccatg caagacgtgg ccatgcaagc gcacattgtc
      601 gtctaaaaag cccacgacac gcatttcttg gctgttggcc attgccatgg ccaattgacg
      661 cccggattcc ccggcaccat aaatcaatgc ccgcggcagc gatgtgcgct tgagaattcg
      721 gtggtaggcg ccgccgagcc agtagtgtgc tagcgcacgc gacaaaccaa cgcctataaa
      781 aagcagcatg ggttgaatca caccaacgct gcgcgggata ccagggatac cgattaccgt
      841 gataatggtg gcaaagacaa tccaataaaa caggaatgca cgagcaacca tgttgaccgc
      901 aattagattg gcatgacgaa agataaccct gtagaagcca tgtgtaatga atagcggtat
      961 ggctagcgcg actgaaaggg ctgatgccca gtccgcccgc caaaacgggt caccgtagag
     1021 gcgaatccac tcatcgagtc ttaaaaagaa agccagccat acggcagcca cacagagtaa
     1081 cgcgtcaagt gcaagtacta acagccgctt tagcggccta ggcatcgcga ggatcgggtc
     1141 gacgagatcg aatctggact tgtcgctcat acgaggatca atcgctgatt aaatgaataa
     1201 gcgtgtagtg tagccgcaca gccctagaca ggtcattgat gctcaatctg atgtagtgcg
     1261 gacggtcaaa atgcggaagg ctagccctaa tgcgccacac catcagagcg cagcacgccc
     1321 acaaaagtta accagatgat cttgatatca aaccaaaagg attgtttgat ttggtactgg
     1381 cggtcaaatt cgactttttg tgggatcggc aagtcgtcgc ggccattgac ttgtgcccat
     1441 ccggtcaagc caggcgtgag cttgtcgatg cctagtgctg ttctcgcctc aattaaatcg
     1501 ttctgattaa acagcgcagg tcttggtcct acaaaactca tgtcgccttt aataatgctt
     1561 agtaactgcg gcaattcatc aaggctagta cgtcgcagca gtgacccgat cggtgttaga
     1621 taggcatcgg ggttagttaa caaatgcgtc gcaactaccg gagtatctgt gcgcatactt
     1681 cggaatttgg gcatggcaaa aagccggtta tgcctaccga cacgctgact ccagtaaagt
     1741 actgggccgg gtgaggtgag ttttaccagg attgccacga taaaaaacgg caagctcagc
     1801 agtagcaggg cggctagtgc gagcagaagg tcaaagagac gtttgtgcca gggcatcaag
     1861 gatggaatgt gtcattaatc ggataaggcg attgtagttt gatcggctga ccacattc
//
LOCUS       DATBNL010000022         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_139733, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000022 DATBNL010000000
VERSION     DATBNL010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139733"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..1248
                     /locus_tag="VIC30_00345"
     CDS             37..1248
                     /locus_tag="VIC30_00345"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEY7802876.1"
                     /translation="MTVHPVYLDYSATTPVDPRVVDKMVPWLYDNYGNPASRSHSFGW
                     DAEAAVEQARADVAALVNADPREIVWTSGATESNNLSIKGAAHFYAERGKHVITLKTE
                     HKAVLDPCRELEREGYEVTYLDVMENGLVDLEALKAAMRPDTVLVSIMFVNNEIGVIQ
                     PIEAIGEICREKGIVFHVDAAQATGKVEIDLQHLKVDLMSFCAHKTYGPKGIGALYIR
                     RKPRIRIEAQMHGGGHERGFRSGTLATHQIVGMGESFRLAKLEMQTENERIRMLRDRL
                     WNGMSDIEEVYLNGDFESRVPHNLNVSFNYVEGESLIMAIKELAVSSGSACTSASLEP
                     SYVLRALGRNDELAHSSIRFTLGRFTTEEEIDFAVGLLKRRVEKLRDMSPLWEMVKEG
                     VDLDSVQWAAH"
     gene            1282..1665
                     /gene="iscU"
                     /locus_tag="VIC30_00350"
     CDS             1282..1665
                     /gene="iscU"
                     /locus_tag="VIC30_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008114608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEY7802877.1"
                     /translation="MAYSEKVLDHYENPRNVGAFDKSEGNIGTGMVGAPACGDVMKLQ
                     IRVGEDGLIQDARFKTYGCGSAIASSSLVTEWVKGKSLDEALEIKNTAIAQELALPPV
                     KIHCSILAEDAIKAAVKDYKEKHGS"
     gene            1682..2005
                     /gene="iscA"
                     /locus_tag="VIC30_00355"
     CDS             1682..2005
                     /gene="iscA"
                     /locus_tag="VIC30_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017874702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEY7802878.1"
                     /translation="MAVTLTTQAAEHIDKYLHKRGKGLGLRLGVRTTGCSGMAYKLEY
                     VDAAHDDDQVFESHGVKVFIDPKSLAYLDGTELDYAREGLNEGFKFTNPNEKATCGCG
                     ESFTV"
     gene            2010..>2253
                     /gene="hscB"
                     /locus_tag="VIC30_00360"
     CDS             2010..>2253
                     /gene="hscB"
                     /locus_tag="VIC30_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEY7802879.1"
                     /translation="MSQSDDFELFGLARGFEVDPQDLESRWKSRAAAVHPDRFANASD
                     AEKRVAMQWSAHVNEAYRVLKDPLRRAQYLCELAGFP"
BASE COUNT          535 a          555 c          651 g          512 t
ORIGIN      
        1 gtttaaagaa atagcatata gattcaggag ttacacatga cggttcatcc ggtttatctt
       61 gactactcgg ccaccacgcc cgtggatccc cgcgtggttg acaagatggt gccatggctc
      121 tacgacaatt acggcaaccc ggcctcacgc agtcattcct ttggttggga cgcggaagcg
      181 gctgttgaac aagcgcgtgc tgatgtggcc gctttggtta atgccgatcc acgcgagatc
      241 gtttggacgt cgggcgccac cgagtccaac aacttgtcga tcaaaggcgc ggcgcatttc
      301 tatgccgagc gtggcaagca tgtcattaca ctgaagactg agcacaaggc tgtgttggat
      361 ccctgccgcg agcttgagcg tgaaggctac gaggtgactt accttgatgt catggaaaac
      421 ggtctggttg acctcgaggc attgaaggcc gcgatgcgtc ctgacacggt gctggtgtcg
      481 atcatgttcg tgaacaacga gattggtgtg atccagccga tcgaagccat tggcgagatt
      541 tgtcgtgaaa aaggcatcgt attccatgtg gatgcggcgc aagccacggg caaagtggaa
      601 attgacctac agcacctgaa agttgatctg atgtcattct gtgcacacaa gacctacggt
      661 cccaagggca tcggcgcctt gtatatccgt cgcaagcccc gtatccgtat cgaggctcag
      721 atgcacggtg gtggtcacga gcgaggcttt cgttcaggca cactagcgac gcaccagatt
      781 gtaggcatgg gcgagtcatt tcgcttagcc aagcttgaga tgcaaacaga aaacgagcgc
      841 attcgtatgt tgcgtgatcg cttgtggaat ggcatgtcgg acatcgaaga ggtttacctg
      901 aacggcgatt tcgaaagccg cgtaccacac aacttgaatg tgagcttcaa ctacgttgaa
      961 ggtgagtcgc tcatcatggc cattaaggaa ttggctgtct ctagcggctc ggcttgcaca
     1021 tcggcgagcc ttgaaccctc ttatgtgttg cgtgcattag gtcgcaacga tgagttggcc
     1081 cacagttcga tccgtttcac gctaggacgg ttcaccacgg aagaggaaat cgatttcgcg
     1141 gttggtttgc ttaagcgtcg cgttgaaaaa ctacgcgaca tgtcaccttt atgggaaatg
     1201 gtcaaagaag gcgttgacct cgattcggtg caatgggctg cccattaatc cgttgtactg
     1261 ttagcaaagg agatagatat catggcctac agtgaaaaag tactagatca ctatgaaaac
     1321 ccccgtaacg tgggtgcgtt tgacaagtcc gaaggcaaca ttggcaccgg catggtcggc
     1381 gcgccagcct gcggtgacgt gatgaaactg caaatccgcg tgggtgaaga cgggttgatc
     1441 caagacgcgc gctttaagac ctacggttgc ggttcagcga ttgcttcgag ttcgctggtc
     1501 accgagtggg tcaagggcaa gtcacttgac gaagcgctcg agatcaagaa cactgcgatt
     1561 gcgcaggagc tcgccttgcc gccagtcaag atacactgtt ccatcttggc agaagacgcc
     1621 attaaggcgg cggtcaagga ctacaaagaa aagcacggta gttgaactgg agtttgacgt
     1681 catggctgtg acattgacaa cacaagcggc tgaacatatc gacaaatacc tgcacaagcg
     1741 gggcaaaggc ttaggcctgc gtttgggagt ccgcaccacg ggctgctcag gcatggccta
     1801 taagcttgag tatgttgatg ccgcgcacga tgacgaccaa gtgtttgaaa gccacggcgt
     1861 caaggtattc attgatccca agagtctggc ttaccttgac ggcactgagc tcgattacgc
     1921 ccgcgaaggt ctgaacgaag gattcaagtt caccaacccc aacgagaagg caacctgcgg
     1981 ttgcggcgaa tcgtttacgg tttagtggct tgagtcaatc ggatgacttc gagctgtttg
     2041 gcttggctcg aggctttgag gtagaccctc aagacctcga gtcgcgctgg aagtcacgtg
     2101 cggctgccgt tcatcctgat cgctttgcca atgcatcaga cgcagaaaag cgcgtcgcga
     2161 tgcagtggag tgcgcatgtg aacgaagcct accgtgtctt aaaagaccca ttgcgccggg
     2221 ctcagtatct gtgtgaatta gctggtttcc cca
//
LOCUS       DATBNL010000023         1844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_60085, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000023 DATBNL010000000
VERSION     DATBNL010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60085"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..516
                     /locus_tag="VIC30_00365"
     CDS             253..516
                     /locus_tag="VIC30_00365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802880.1"
                     /translation="MPNHRPPAGTPSKYTQRSIPKRTITITITNTNTNPATKDRGSSN
                     SLATRPVNCCCSILVWDGWNGWDWRHKSAVKSVWLYDSTVAVL"
     gene            831..1511
                     /locus_tag="VIC30_00370"
     CDS             831..1511
                     /locus_tag="VIC30_00370"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7802881.1"
                     /translation="MNVPQPAHRSTQPFKVLVVEDDPFFIKALEKSITLTIPNGEVDV
                     YRQSHEATDRVKPGHAPYALAIIDLQLPDGDGIDVIRHITQTHPKTFIMVMSVASDEK
                     RVLQAVRAGATGYVVKGDMSLSINKAIEQTLNGLHPISPSLAGYFLRLAGRESFNGED
                     CPIDRLTARELELLREFASGKSYQEAADTMKISITTVRTHTTNLYRKLGVRSSLRALS
                     VAKEHGIL"
     gene            1498..>1844
                     /locus_tag="VIC30_00375"
     CDS             1498..>1844
                     /locus_tag="VIC30_00375"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY7802882.1"
                     /translation="MASSEISLSRLMTPSLLAVMDNLPFPISFAETSETPVKIAFVNK
                     EFKRIFGYELHEIADIDQWAAQAYPDEAYRHEVMNSWGRDAAVAAQSDGSIPIREVEI
                     RARDGTTVKTLLN"
BASE COUNT          464 a          484 c          475 g          421 t
ORIGIN      
        1 tttgcacatg cgccagcaca aatgtttaca catgcgtcag cgtgaatgcg ataagcaatc
       61 cacgccacct tctagagcca agtgtcaaca acgcgaaatc agcggctgtc actggtacga
      121 tcgtatgagc tgaattgtga tgccaaagtt cagttactgg tatcccatgt ttgatgtgtg
      181 attggcatga acatgtgatt tttatcggga tttttgcggg ttttttacca gcgtatatag
      241 actgaactgc tcatgccgaa tcatcgcccc ccagcaggta caccgagcaa gtacacccag
      301 cgatctattc ccaagcgaac catcaccatc accatcacca acaccaacac caatccagcc
      361 accaaggacc gaggcagcag caattcactg gcaacgcggc cagtgaattg ctgctgctcg
      421 atattggtgt gggatgggtg gaatgggtgg gattggcgac ataaaagtgc ggttaaaagc
      481 gtgtggcttt atgacagcac tgtggcagtg ttgtgacaca tgtgcgttgg cattgcggca
      541 ttgcaacatt gcggcttatt tgcgttgatg ctgttttgat atagacagcg tggcggtttg
      601 gttggattat gtatgcgcgg ctggaaatcg agctacggat acagcccaaa gtacggacgc
      661 aagtgcagac acaagtacgg acacaattgc ggacacaagc gaatgtcgct agaaccaaag
      721 ttgcaaacgt ggctgccgga ctcgaactta tctcgtatcg tatgttcgtt cgatttagtt
      781 gacagttaaa gacaggttta atcaatgctt gtaaatcaaa gagcgccagc atgaatgttc
      841 ctcaaccagc ccaccgatca acacagcctt ttaaggtgct ggttgtcgaa gacgaccctt
      901 tctttatcaa ggccctagaa aaaagcatta cgctgaccat tcccaatggc gaggttgacg
      961 tctaccgaca aagccacgag gccaccgaca gagtcaaacc gggccatgca ccttatgccc
     1021 tggccatcat cgacttgcaa ctgcccgatg gtgatgggat cgatgtcatc cgtcatatta
     1081 cccagactca ccctaaaacc ttcatcatgg tcatgtcagt ggccagcgat gagaagcgcg
     1141 tgttgcaggc cgtgcgtgcc ggggccacgg ggtatgtggt taaaggtgac atgtcgctgt
     1201 cgattaacaa agccattgag caaaccttaa atggcttaca tccaattagc ccatcgctgg
     1261 caggctattt tctgcggtta gccgggcgcg agagtttcaa cggtgaagac tgcccgattg
     1321 accggctaac cgcacgagag cttgagcttt tacgagaatt tgcttctggc aagagctacc
     1381 aggaagcagc tgacaccatg aaaatctcca tcaccactgt gcgcacccac accaccaacc
     1441 tgtatcgcaa gcttggtgtg cgctcgagcc tgcgcgcttt gtcggttgcc aaagagcatg
     1501 gcatcctctg agatcagtct ctcgcgtctc atgacaccga gcttgctcgc ggtcatggac
     1561 aacctgccgt ttccgatctc ttttgctgaa accagcgaaa cccctgtcaa gatcgctttc
     1621 gttaacaaag agttcaagcg catctttggg tatgagttgc acgagatcgc cgacatcgac
     1681 caatgggccg cgcaagccta tccagatgag gcttaccggc acgaggtcat gaacagctgg
     1741 gggcgcgacg ccgccgtagc agcccaatcg gatggctcca taccgatacg tgaagtcgag
     1801 attcgggcgc gtgatggcac aaccgtcaag accctgctca acga
//
LOCUS       DATBNL010000024         2104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10373, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000024 DATBNL010000000
VERSION     DATBNL010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10373"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VIC30_00380"
     CDS             complement(<1..453)
                     /locus_tag="VIC30_00380"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY7802883.1"
                     /translation="MTEQAGIPHIREIVLFLAFAGVLIPLLGKLRINQVLGFLALGVL
                     VGPYGAARLADDWPVMAFFTFPNPEATAHLAELGVVFLMFTIGLELSVQRLIALRHWV
                     FGVGLLQMVLTGVFAVVVALLAGVAWLPAVMVGLVLSFSSTAVVMQLLR"
     gene            complement(602..1147)
                     /gene="phaR"
                     /locus_tag="VIC30_00385"
     CDS             complement(602..1147)
                     /gene="phaR"
                     /locus_tag="VIC30_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HEY7802884.1"
                     /translation="MTEQTAAQPSRLIKKYPNRRLYDTETSSYITLSDVKQLVLDNEN
                     FKVVDAKSGEELTRSILLQIILEEESGGLPMFSSQVLAQIIRFYGHAMQGMMGAYLEK
                     NLQAFNEIQERLTEQSKTMYGTQFGQEAWTQFMNMQAPMLQTMMNNYVEQNKNMFVQM
                     QDQMQDQTRAMFSGFPFKPKE"
     gene            complement(1255..1992)
                     /gene="phbB"
                     /locus_tag="VIC30_00390"
     CDS             complement(1255..1992)
                     /gene="phbB"
                     /locus_tag="VIC30_00390"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HEY7802885.1"
                     /translation="MEKKLAYVTGGMGGIGTAICQRLAKEGMTVVAGCGPSRDYDRWL
                     KEQAEQGYQFYASVGNVADWQSTVDAFKKVTQEHGPVSVLVNNAGITRDGVFRKMGEE
                     DWRAVMDTNLNSLFNVTKQVIDGMVEQGWGRIVNISSVNGQKGQFGQTNYATAKAAIH
                     GFSMSLAQEVASKGVTVNTVSPGYIGTDMVRAIRPDVLEKIVATIPVKRLGEPSEIAS
                     MVAWIASEDAGFATGADFSLNGGLHMG"
BASE COUNT          535 a          603 c          488 g          478 t
ORIGIN      
        1 acgcagtaac tgcattacaa cggccgtcga agaaaacgac agcaccaagc caaccatcac
       61 ggccggcaac caggccacac cggccaacaa ggcaaccacc acggcaaaca caccggtgag
      121 caccatctgc agcaagccaa ccccaaacac ccaatggcgc aacgcaatca atcgttgtac
      181 cgatagttct aagccgatgg taaacatcag aaacaccaca ccgagctcag ccagatgcgc
      241 tgttgcctcg gggtttggga atgtaaagaa ggccatcacc ggccaatcgt cggctagccg
      301 cgccgcgcca tagggtccca cgagcacgcc aagcgccaaa aagccaagca cttgattgat
      361 acgcaactta cctagcagag gaatcaaaac cccagcaaag gcaagaaaca gtacgatttc
      421 acggatgtgg gggatgccag cctgctcagt catcttcaca ttatgaatca aaagcgatga
      481 ccggcgtttg acatagcacc agagatgata agaaccaccg tggcaacagc cactcgttgt
      541 gtgggtacct agggcctgag actagctctt ggcactaggt actgagcact aggtctaaat
      601 ctcattcttt gggtttaaac ggaaaccctg agaacatggc acgggtctga tcttgcatct
      661 gatcttgcat ctgcacgaac atgttcttgt tttgttcgac gtaattgttc atcatcgtct
      721 gcaacatggg cgcttgcatg ttcatgaact gcgtccaggc ttcttgaccg aactgcgtgc
      781 cgtacatggt tttggattgc tcagtcaagc gttcctgaat ttcgttaaaa gcttgcaggt
      841 tcttctcgag atatgcgccc atcatgccct gcatggcatg gccatagaac cggatgatct
      901 gcgccaacac ctgagacgag aacattggca aaccaccgct ttcttcctca agaataatct
      961 gcaacaaaat gctccgggtc agttcctcac cagacttggc atcaacgacc ttgaagttct
     1021 cgttgtctaa aacgagttgc ttgacatcag acagggtgat gtagctactc gtttccgtgt
     1081 catacaagcg ccggttcgga tacttcttga tgaggcgact cggctgtgct gcagtttgtt
     1141 ctgtcatcgt ggtttccata aaggagtgca acagatcggg ttgtcgttgc gtggccagat
     1201 gcccgtaccc tagggctagc gttggcaacc cgatctatct gggtttccta aaggttaacc
     1261 catatgtaag ccaccgttaa gggagaagtc agcgcccgtc gcaaaaccag catcttctga
     1321 agcaatccaa gccaccatgg atgcaatctc tgacggctca cccagacgct tgactggaat
     1381 ggtcgccacg attttttcca gtacatccgg gcgtatcgca cgcaccatgt cggtaccaat
     1441 gtagcctggt gacacggtgt tgacggtcac acccttgctc gcaacctctt gagccagcga
     1501 catgctgaac ccatggatag ctgccttggc cgtggcgtag ttggtttgac caaactggcc
     1561 tttttgacca ttaactgaac tgatgtttac gatccggccc cagccctgct ccaccatgcc
     1621 atcgatgact tgcttggtca cgttaaacag actgttcagg ttagtgtcca tgacggcgcg
     1681 ccaatcttcc tcacccatct tacgaaacac accatcacgg gtgatgcccg cattattcac
     1741 aagcacagaa acggggccat gctcttgggt gactttctta aatgcatcaa cggtggactg
     1801 ccaatcggca acattgccaa cggaagcata aaactgatag ccctgctcag cttgctcctt
     1861 gagccagcga tcgtaatctc ggctcggacc acaaccggcc actaccgtca tgccttcttt
     1921 agccagacgc tgacaaatcg ccgtgccaat accacccata ccgccagtta catacgccaa
     1981 ctttttttcc atggtctcat cctcctgtta ctctttcgaa ttggaatatc agttcacccg
     2041 agcacaaagc aaactgacgg taaaaatcaa accgctcgaa ctttgacata actgcctggt
     2101 gcgg
//
LOCUS       DATBNL010000025         1768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_30225, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000025 DATBNL010000000
VERSION     DATBNL010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30225"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VIC30_00395"
     CDS             <1..455
                     /locus_tag="VIC30_00395"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY7802886.1"
                     /translation="AQSGQQAAAFWRIRDSVSEFPILIAPYASFDVSLPIESVVRFVS
                     ALKAQVQQQWPDAVSLFFGHIGDSNLHIVVHVPTAREQFPKEAIDTMVYEQVGQYQGS
                     VSAEHGIGTRKKKWLGQSRNPAEMALMRTIKLALDPKQILNRGRVIDV"
     gene            complement(497..1603)
                     /locus_tag="VIC30_00400"
     CDS             complement(497..1603)
                     /locus_tag="VIC30_00400"
                     /inference="COORDINATES: protein motif:HMM:NF014345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choloylglycine hydrolase family protein"
                     /protein_id="HEY7802887.1"
                     /translation="MKHTRLNRWLASLMATFMMLGPVAAHACTSFLLPGSDGGFVYGR
                     SLEFGVDIDSRGITIPRNIAMQGTGVDGKEGTGKKWTTQYAAIGAAALGLPILVDGLN
                     EKGLAGGMLYAPGITEYQEVEPAESGNSIASYEMLVYALTNFATVDEVREGFKQIKVN
                     RSPQKLFKGVVDLHLTLHDSSGKSIVIEYIGGELQISDNPTSVLTNAPQFNWHLNNLG
                     NYTKLSAKEPGSIKLGATDIGPWSTGYGMMGMPGDFSSPSRFVRAFFMKENAPADRTT
                     EQQVGTAFHFLNNFDIPPGSISLAGGGGFGGGGGGYEITYWVSVSDLKNMIFYLRTHG
                     NPSVQLIDMSKMDMDAKEITYLDFQTEWNLKPLN"
BASE COUNT          404 a          442 c          469 g          453 t
ORIGIN      
        1 ttgcgcaatc tggtcagcaa gcagctgcat tctggcgaat ccgggattcg gtctcagaat
       61 ttccaatact aattgcaccc tatgcgagtt ttgatgtgag cttgcccatt gagtcggtgg
      121 tgcggtttgt cagtgcgttg aaagcgcaag tgcaacagca atggcccgat gccgtttctc
      181 tgttttttgg acatattggc gatagcaacc tgcacatcgt ggttcatgtg cccacggcgc
      241 gtgagcagtt ccccaaagag gcgattgata cgatggtcta tgagcaggtg gggcaatacc
      301 aaggctcggt gtcagccgag catggcattg gcacgcgcaa gaaaaaatgg cttggtcagt
      361 cgcgcaatcc tgctgaaatg gcgttgatgc ggaccattaa actcgccctc gatccaaagc
      421 agatattgaa tcgagggcgc gtcattgatg tttgattgat gtttgactga tgtctgttaa
      481 gtgtcagttt tgagtatcag ttcagtggct tgagattcca ctctgtctgg aaatccaaat
      541 acgtgatctc tttcgcatcc atgtccattt ttgacatgtc aatcagttgc accgacgggt
      601 tgccgtgcgt gcgcaggtag aagatcatgt ttttcaaatc tgagacggaa acccaatagg
      661 tgatttcata gccaccacca ccgccgccaa acccgccacc accggctaag ctaatgctgc
      721 caggcggaat gtcgaagttg tttaaaaagt gaaacgcggt accgacttgc tgctcagtgg
      781 ttctgtcagc cggtgcgttt tccttcatga agaatgcacg gacaaagcgt gacggagaag
      841 aaaaatcacc gggcatgccc atcatgccgt aaccggtgct ccagggcccg atgtctgtgg
      901 ccccaagttt gatagaaccg ggttctttgg cagagagttt ggtgtagtta ccgaggttgt
      961 tcaggtgcca gttaaattgt ggcgcattgg tcaataccga ggtcgggtta tccgagatct
     1021 gcagttcacc accgatgtat tcgatgacaa tgcttttgcc gctgctgtca tgcagggtca
     1081 ggtgcagatc aaccacgcct ttgaatagct tttgcggtga gcgattgacc ttgatctgct
     1141 taaaaccttc acgtacctca tcgacagtcg caaagttggt cagtgcgtag accagcatct
     1201 catatgaagc aatcgagtta cccgattcag cgggctcgac ttcctggtat tcagtaatac
     1261 cgggggcgta gagcatgccg ccggccaagc ctttttcatt taggccgtcg accaagatag
     1321 ggagaccgag tgccgcagcg ccaatggcag cgtactgggt tgtccatttt ttacctgtac
     1381 cctccttgcc atcgacacca gtgccttgca tggcgatgtt gcgcggaatc gtgatgccgc
     1441 gcgaatcgat gtctacgcca aactctaagc tgcgaccata cacaaacccg ccatctgaac
     1501 ccggtaacag aaagctagtg caggcgtgcg cggcaaccgg gccgagcatc atgaatgtcg
     1561 ccatcaggct tgctagccaa cgattcaaac gggtgtgctt cacagatatt tctcctaggt
     1621 acggtatggc agtttcgtgt gttgtagttt aagtctaaaa ccgttgtagc cgtcgtttct
     1681 aacagcattt ggtgtctaag accactgcaa gatttcatgc acgcgggtca tgacccactg
     1741 gcactctgct tcgcttagtt ctaatccc
//
LOCUS       DATBNL010000026         4950 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_50235, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000026 DATBNL010000000
VERSION     DATBNL010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4950
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50235"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VIC30_00405"
     CDS             complement(<1..531)
                     /locus_tag="VIC30_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HEY7802888.1"
                     /translation="MKPTPLHPAEALLLAKVQDSVVERASRIRLMIFDVDGILTDGRL
                     LYGEQGEVIKQFHVLDGHGLKMLDTSGIGVAIITARDGPIVAWRAAELGIKHVKQGVR
                     NKAQALSDLAKELGLPHEAVGYMGDDVIDLSAMQLAGLAVTVPNAPPYIAQGAHWTTT
                     REGGQGAARECCDLILA"
     gene            complement(528..1514)
                     /locus_tag="VIC30_00410"
     CDS             complement(528..1514)
                     /locus_tag="VIC30_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEY7802889.1"
                     /translation="MTEGKNQAAEILASGHQTLAIESAALTELKDRLDDRFVSAVETL
                     LACHGRVVVCGLGKTGHIARKIAATFASTGTPAIFLHAAEPLHGDLGVLTPQDVLLGL
                     SHSGTGHEILTVVAGAHRLGVPVLAMTGNPDSDLAQLSNIHLDVSVKTEACPMNLAPT
                     SSTTAALALGDALALACLNARGFTTEDFARSHPGGQLGRRLLTRVRDVMRQGAAIPTV
                     DPSASMTEALAEMSQKNMGMTAVVDNQGVAIGIFTDGDLRRLLETAGDIRHLTIAQGM
                     SANPQHIDADVLAVDAATIMDERRISQILVSDNTGKLIGALHMHDLMTAKVI"
     gene            1598..2818
                     /gene="purT"
                     /locus_tag="VIC30_00415"
     CDS             1598..2818
                     /gene="purT"
                     /locus_tag="VIC30_00415"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HEY7802890.1"
                     /translation="MFNVTSPTWGTPMTTVAKRVMLLGSGELGKEVIIALQRLGVEVI
                     AVDRYARAPGHQVAHHAVVVDMADRQALLSVIDTWQPDVIVPEIEAIATDLLVELEGR
                     NGLRVTPTARAAQLTMNREGIRRLAAETLGLATSPYRFADSFEAFESAVTAIGLPCVV
                     KPVMSSSGKGQSVIRELQDIRAAWDYAQSGGRVGAGRVIVEGWVSFDYEITLLTARSL
                     NASGEVITDFCAPIGHLQVDGDYVESWQPQPMSAAALERAQAMARAVTSELGGLGIFG
                     VELFVKGDDVWFSEVSPRPHDTGLVTLASQVQSEFEIHARALLGLPVNVQLRSPSASA
                     VIYGGVDATAVVFEGMAQALAEPGTDLRLFGKPASFVKRRLGVGLAAADTIEQARARA
                     QGVSKAISVKAANS"
     gene            complement(2815..4329)
                     /gene="ilvA"
                     /locus_tag="VIC30_00420"
     CDS             complement(2815..4329)
                     /gene="ilvA"
                     /locus_tag="VIC30_00420"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEY7802891.1"
                     /translation="MSTDYLKRILTSKVYDVASETPLEVAPTLSARLGNTVLLKREDH
                     QPVFSFKLRGAYNKMAHLSKEALSRGVIASSAGNHAQGVALSAKRLGCRAVIVMPTTT
                     PPVKIDAVKRLGAEVILHGDSYTDAFEKASELETNEKLTFVHPFDDPDVIAGQGTIAM
                     EILRQHPGNIDAVFVAIGGGGLISGVAAYIKQLRPGIKVIGVQTEDSDAMVRSIKAGK
                     RVRLQDVGLFSDGTAVKQVGVETFRLVKEHVDDFVIVDTDAICAAIKDVFQDTRSVLE
                     PAGALAIAGAKQYAQQHRWKNKTLVAIACGANMNFDRLRFVAERAEVGESREALFAIT
                     LPEERGSFRQLCTLVGPRNVTEFNYRISDAEQAHVFVGIQVEQAKDSSKLATEFKRNG
                     FPTVDLTHDEMAKTHLRHMVGGHSKLAKDELLYRFEFPERPGALTRFLSTMRPEWNIS
                     LFHYRNQGADYGQILIGIQVPIGQKTAFRSFLSEIGYPSWNETDNPAYQLFLGG"
     gene            4446..4907
                     /locus_tag="VIC30_00425"
     CDS             4446..4907
                     /locus_tag="VIC30_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019656282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEY7802892.1"
                     /translation="MLNIGLGALFLAGFVASTLLPGGSEPLLMVYLAQQAPVALWPQA
                     ALVVLVMGVGNTLGGVVTYGMGRGGRYVFKRLRQEVDEQRSSHRKAKGWLERWGPWAL
                     LMSWVPIVGDPLCLAAGAMKLSFGRCVIAMAIGKFARYVVLVAAFMAVQGA"
BASE COUNT         1016 a         1296 c         1466 g         1172 t
ORIGIN      
        1 ggccaatatc aggtcacagc actcacgtgc ggcaccttgg ccgccttcgc gtgtcgtggt
       61 ccaatgtgcg ccttgggcga tataaggggg cgcattgggc accgtgacgg ccaacccagc
      121 aagctgcatg gcgcttaggt caatcacatc atcgcccatg taaccgactg cttcgtgggg
      181 taaaccaagc tctttggcca gatcgctcaa ggcttgggcc ttgttacgga caccttgttt
      241 gacatgcttg ataccgagct cggcggcgcg ccaagccaca atgggtccat cacgtgcggt
      301 aatgatggct acaccaatac cgctggtgtc gagcatcttt aggccgtggc cgtcgagcac
      361 atggaattgt ttgatcactt caccttgctc gccatatagg agtcgtccgt cggtcaggat
      421 gccgtcaaca tcgaagatca tcaagcgaat acgactggcg cgctcgacga cgctgtcttg
      481 cacttttgct agcaacaacg cttcagcagg atgcagggga gttggtttca tatcactttg
      541 gccgtcatca aatcatgcat gtgtaaggca ccgattagtt taccggtgtt gtcgctcacg
      601 agaatctggc taatgcgtcg ctcatccatg atggtcgcgg catcaacggc cagcacatcg
      661 gcatcaatat gttgagggtt tgccgacatg ccttgtgcaa tggtcaggtg acgaatgtca
      721 cccgcggtct cgagcaggcg ccgcaaatca ccatcggtga agatgccgat ggccacgcct
      781 tgattgtcta ccactgctgt catgcccatg ttcttttgtg acatttcagc caacgcctcg
      841 gtcatcgaag cgcttgggtc aacggtcggg atggctgcgc cttggcgcat cacgtcacgc
      901 acacgtgtca gtaaacgtcg cccgagttga ccgcctgggt gagagcgcgc gaagtcctcg
      961 gtggtaaagc cccgggcatt taggcaagcc aatgcaagtg catcaccgag tgctaaggca
     1021 gcggtggtgc tgctagtggg tgccaggttc atggggcatg cctctgtttt gacgctgaca
     1081 tcaaggtgga tgttcgacaa ctgggccaaa tccgagtctg ggttgcccgt catcgccagt
     1141 actggcacgc ctaagcgatg tgcccctgcg acgacggtca ggatttcgtg tccggtacct
     1201 gagtgcgaca aaccgagcaa cacatcctgc ggcgtgagca cgccgaggtc accatgcaag
     1261 ggctctgctg cgtgtaaaaa gatggcaggt gtgccggtcg aggcgaaggt cgctgcaatt
     1321 tttctggcga tgtgaccggt tttgcccaaa ccacaaacca ccactcgacc atgacaggcc
     1381 agtagtgtct ccacggcact tacgaaacga tcgtcaagac gatccttgag ttcggtcagc
     1441 gcggctgact cgatcgccag cgtctggtgg ccactggcca aaatctcagc ggcttggttt
     1501 tttccttcag tcatccaagg attttaaccg tgaccccatg ctaaaaggcg aatatgtgca
     1561 gctaaccgca aacaaacact tcacaatgga ccaaaacatg ttcaacgtca cctcgccaac
     1621 ttggggaaca ccaatgacga cagtagccaa gcgggtcatg ctgcttgggt caggcgagct
     1681 tggcaaagaa gtgatcattg ctttgcagcg ccttggggtg gaagtcattg ccgtggatcg
     1741 ctacgcccgc gcccctggtc atcaagtcgc gcatcatgcg gtggtggtgg atatggctga
     1801 tcgccaggca ctattgagtg tgattgatac ctggcagcct gatgtcatcg tgcctgagat
     1861 tgaggccatt gccactgacc tgttagttga gcttgaagga cgcaacggat tgcgggttac
     1921 gccgacggcg cgcgcggcgc agttgacgat gaaccgtgaa ggcattcgac gtctagcggc
     1981 tgaaacattg ggtttggcga cctcacctta tcggtttgct gattcttttg aagcatttga
     2041 gtctgccgtg actgccatcg gtctgccatg cgtggtcaag cctgtgatgt cctcttctgg
     2101 caaaggccaa agtgtgatcc gtgagcttca agatattcgg gcggcgtggg actacgcgca
     2161 atccggcggg cgtgtgggtg caggtcgtgt cattgttgag ggttgggtaa gcttcgatta
     2221 cgaaatcacg ctgctgacgg cccgttcttt gaatgccagc ggtgaagtga taacggactt
     2281 ttgtgcgccg atcggacatt tgcaggtcga tggtgactac gttgaaagct ggcagcctca
     2341 gcccatgtct gctgcggcgc tcgagcgtgc ccaagccatg gcgcgggccg tgacgtctga
     2401 attgggcggc ttagggattt ttggggttga gttgttcgtt aaaggcgatg atgtctggtt
     2461 ttctgaggtc agcccgcgac cgcacgacac gggtctggtg acgttggctt cgcaggttca
     2521 aagcgaattc gagatccatg cgcgtgcctt gctcgggttg cctgtcaatg ttcagttgcg
     2581 ctcacctagc gccagtgccg tcatctatgg tggtgtggat gccactgcgg ttgtgtttga
     2641 gggcatggcc caagccttgg ctgagcccgg tactgattta cgcttgtttg gcaagccagc
     2701 atcatttgtt aaacgccggc ttggcgttgg cttggctgcg gccgacacga ttgaacaggc
     2761 ccgagcgcgg gcccaggggg tttcaaaagc gatatcggtc aaagcagcta attcttaacc
     2821 acctaggaac aattgatagg ctggattgtc cgtttcgttc cacgacggat agccaatctc
     2881 ggacaaaaag gaccggaatg cggttttttg tcctatcggt acttgaatgc cgatgagaat
     2941 ctgaccgtag tcagctcctt ggttgcggta gtgaaacagg ctgatgttcc attccgggcg
     3001 catggtgctc agaaagcgcg tcagagcgcc agggcgttcc ggaaactcaa agcggtagag
     3061 caactcatcc ttggcaagct tggaatggcc accgaccata tgtcgcaagt gggttttggc
     3121 catttcatcg tgcgtgaggt cgacagtcgg aaacccattg cgcttgaact cagtggcaag
     3181 cttggaagag tctttggctt gttcgacttg gatgcccacg aagacatggg cttgttcagc
     3241 gtctgagatc cggtagttga attcggtgac gttgcgcgga cctacaagtg tgcacagctg
     3301 tcggaaactg ccgcgctctt ccggcaaggt aatggcaaac agggcttcgc gtgactcacc
     3361 gacctcggca cgttctgcca cgaagcgcag gcgatcaaag ttcatgtttg cgccacaggc
     3421 gatcgcgacc agcgttttat ttttccagcg gtgttgttgc gcgtattgtt tggcgccggc
     3481 aatggccagt gcgccagcag gctcaagcac actacgggtg tcttgaaaca cgtctttgat
     3541 ggctgcacaa atcgcgtcag tgtcgacaat cacaaaatca tcgacgtgct ctttgacgag
     3601 cctgaacgtc tctaccccca cttgtttgac ggcggtgccg tcagagaaca agccaacatc
     3661 ttgtagccgc acccgtttgc cagctttgat gctgcgcacc atggcatctg aatcttcagt
     3721 ctgtacgcca atgactttga taccgggtcg caactgcttg atgtaggcag ccacaccact
     3781 gatcaagcca ccgccaccga tggccacaaa caccgcatcg atattgcccg gatgttgacg
     3841 caaaatctcc atggcaatgg tgccttgccc ggcaatgaca tctgggtcat cgaacggatg
     3901 aacgaatgtc aacttctcgt tggtttcaag ttcagatgct ttctcaaaag cgtcggtgta
     3961 actgtcaccg tgcaagatca cttcggcgcc aagccgtttg acggcgtcaa ttttgaccgg
     4021 cggtgtagtt gtgggcatga caatgacggc gcgacaccct aggcgcttgg ccgataaggc
     4081 cacgccttgc gcgtggttgc cagctgacga ggcgatcaca ccacgtgaca acgcctcttt
     4141 gcttaggtgc gccatcttgt tataggcacc acggagcttg aagctaaaaa ccggctgatg
     4201 gtcttcgcgt ttaagcagca ccgtgttgcc aagccgcgcc gacagggtgg gggcgacttc
     4261 cagtggtgtc tcgcttgcca cgtcatacac tttggatgtc aggatgcgct tgagataatc
     4321 ggtcgacata agcccagcta ctaagaaaac ccctattatt ccatgccatg actactggtg
     4381 agtcactatg tgcgtcaatg gcgcgagcgc atgatcaaac ttgcaccaca aatagaaggg
     4441 agtggatgtt gaacattggt ttaggcgcgt tgtttttagc cgggtttgtg gcctcaacgt
     4501 tattgcccgg cggctccgag ccgctgctca tggtgtattt ggcacagcag gcacccgtcg
     4561 ccctatggcc gcaagcggca ttggtggtgc tggtcatggg tgtgggcaac acgctcggcg
     4621 gcgtggtgac gtatggcatg gggcgtggtg gccgttatgt ttttaagcga ttgcggcaag
     4681 aggtcgatga gcagcgctcg agtcatcgca aggccaaagg ttggcttgag cgttgggggc
     4741 cttgggcttt gctgatgtct tgggtgccga tcgttggcga cccgctatgc ttggcggccg
     4801 gcgccatgaa gctgtcgttt gggcgttgcg taatcgccat ggcgatcggt aaatttgcac
     4861 gttatgtggt gttggtggcg gctttcatgg cggtgcaggg cgcctaactg acccataact
     4921 gatcaataac tgacgaatag ccaattagaa
//
LOCUS       DATBNL010000027         3677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_90080, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000027 DATBNL010000000
VERSION     DATBNL010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90080"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VIC30_00430"
     CDS             <1..605
                     /locus_tag="VIC30_00430"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HEY7802893.1"
                     /translation="IEKFDWIVKKLHEQQARQQRQQLVQSNWRAGGALSYLGHRIELR
                     CDTPSNPDARGQLWFDGDLHNPKSGDQLWLPLPPDSESEQIRELAQGWLQRQAKTCFG
                     ERLAVFEARTGLKPNRWRLSSASGRWGACNGAGNITLNWRLIHFKLPVVDYVIAHELA
                     HLRELNHSPAFWQAVKDIYPDYMTGYKALKGLSPGDTPAV"
     gene            649..1038
                     /gene="gloA"
                     /locus_tag="VIC30_00435"
     CDS             649..1038
                     /gene="gloA"
                     /locus_tag="VIC30_00435"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010090736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEY7802894.1"
                     /translation="MRFLHTMLRVGNLERSLDFYTNVLGMRLLRQKDYPSGRFTLAFV
                     GYEDEDKGTVLELTHNWDTDAYDIGDAYGHIALQVSDAAATCDMVRAKGGKVTREAGP
                     MKHGTTVIAFVEDPDGYKIEFIERQAA"
     gene            1062..2291
                     /locus_tag="VIC30_00440"
     CDS             1062..2291
                     /locus_tag="VIC30_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008168653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HEY7802895.1"
                     /translation="MLNTLWLVFFLGGIAAGLIQWLWLGDAEVFGRMVQSLFEMAKLS
                     VDIMIVLFGTLTLWLGLLRIAELAGLVQTLGRWLSPLFARLMPEVPRGHPALGLITMN
                     FAANGLGLDNAATPVGLRAMRELQTLNPNPNTATNAQILFLVLNTSALTILPVTIFMY
                     RLQQGAADPTLVFLPILVATGASTLAGLLTVAWIQRLKLHDPVVLLWLGATALVLSAI
                     MATAASLTAATLAHVSSLAGNLTLLGIIALFLGVGAWRKVAVYEAFIEGAKQGFDIAK
                     DLLPYLVAMLCAIGLLRSAGAVDFLLDGVRFVVELVGGDTRFIDGLPTAFMKPLSGSA
                     ARAMMIETMQFHGVDSFAGLLAATLQGSTETTFYVLAVYFGAVGIQRARHAVGCALAA
                     DFAGIVAAILACYAFFG"
     gene            2305..3480
                     /locus_tag="VIC30_00445"
     CDS             2305..3480
                     /locus_tag="VIC30_00445"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEY7802896.1"
                     /translation="MNIVIAPDSFKESLSATDVAQAIAAGIQAVIPQAQVHCLPMADG
                     GEGTLDAVLAVTGGERRELEVTDALGRPRLAQWGWLPDETAVIEMASAAGLEHIASAD
                     RDPARADTHGVGKLILAALDAGAKQIVLTAGGSATNDAGSGMLRALGLQFFDRHDMPL
                     APGGMALANLARLDASALDARLASVEITVATDVRNPLCGPEGASAIFGPQKGATPELV
                     RELDQALGQFAHITTQTTGQDMQNHPGAGAAGGLGFAALAWMGARMRPGVEVVAQLAN
                     LEQAVSQADLVFTGEGRMDAQTLQGKTPWGVMRIAKEHHVPVIAITGSLGQGYQALYE
                     AGLTAAFSLANGPIALDDAIAQAPALLQSRATDIMRLWLLATNRTAPAAAPTHRSSE"
     gene            complement(3407..>3677)
                     /locus_tag="VIC30_00450"
     CDS             complement(3407..>3677)
                     /locus_tag="VIC30_00450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase"
                     /protein_id="HEY7802897.1"
                     /translation="VRMVPLPSTRTRAVDEALFANLVQRAFAQRRKMLRRALGDWTNL
                     IPWDEIGVEPTARAEQVDVAGFIRMSDALAQRLAPSDSLPTTTNA"
BASE COUNT          775 a         1052 c         1036 g          814 t
ORIGIN      
        1 tcattgaaaa gtttgactgg atcgtcaaga agcttcatga acaacaagcc cgtcagcaac
       61 gacaacagtt ggtgcagtca aactggcgcg ctggtggcgc attgtcctat ctgggtcatc
      121 gcatcgaact gcgctgcgat acgccatcaa acccggacgc acgagggcaa ctctggttcg
      181 atggtgatct gcacaacccg aaatcgggcg accagctttg gttacccttg ccgcctgaca
      241 gcgaatcaga acagatccgc gaattggccc agggttggct gcagcggcaa gctaaaacct
      301 gctttggaga gcgtctggca gtgttcgagg cgcgaacagg cttaaagccc aatcgctggc
      361 gtttgtcgtc cgcttctggg cgctggggtg cttgcaacgg cgctggcaac atcactttaa
      421 actggcgatt aatccacttt aagctacccg ttgtggacta cgtgatcgcc catgaattgg
      481 cccacctgcg agaactgaac cacagcccag cattctggca ggctgtcaaa gacatctacc
      541 ccgactacat gactggatat aaggcattaa aagggctgtc gccaggtgac acgccggcgg
      601 tatgatcaaa ctttggcgca atgcccaaac aatgtaagga gctttcacat gcgatttctg
      661 cacaccatgt tgcgcgtggg caatctagaa cggtccctcg atttctacac caatgttctt
      721 ggcatgcgct tgcttcgtca aaaagactat ccttctggtc gttttaccct ggccttcgta
      781 ggctatgagg acgaggacaa gggcacagtg cttgaactta cccataactg ggataccgac
      841 gcttacgaca tcggtgatgc gtacggacac attgcactac aggtcagcga tgcagctgcc
      901 acctgcgaca tggtgcgcgc caaaggcggc aaagtcaccc gagaagccgg tcccatgaag
      961 catggcacca ccgtgattgc gtttgttgaa gaccccgatg gctacaaaat cgagttcatc
     1021 gagcgccaag cggcatgatg gttaactagc cctcaccagc catgttgaac acgctctggc
     1081 tggtgttttt tcttggtggc atcgccgctg gtctaattca gtggctgtgg ttaggcgatg
     1141 ccgaggtctt tggccgcatg gtgcaaagcc tcttcgaaat ggccaagcta tcggtcgaca
     1201 tcatgatcgt gctgtttggc acactgacgt tgtggctcgg tctgctgcgc atcgcggaac
     1261 tggctgggct ggtgcaaacg ctaggacgct ggctatcacc gctatttgcc agactcatgc
     1321 cggaagtgcc gcgtggacac ccggcgcttg gcctaatcac catgaacttt gccgccaacg
     1381 gacttgggct ggacaatgca gccaccccgg tcggcttgcg tgccatgcgc gagctgcaga
     1441 ccttaaaccc aaaccctaac accgccacca acgcacagat tctgtttctg gtgctcaaca
     1501 cgtcggcgct gacgattctg ccggtgacga tttttatgta tcggctgcaa caaggtgccg
     1561 cagacccgac actggtattt ttacccatcc tggtggccac tggtgcttct acgctggcag
     1621 ggcttctcac ggttgcctgg atacagcgct taaaactaca tgacccggtc gtattgctgt
     1681 ggctcggtgc cacagcactg gtgttgtcag ccatcatggc cacagctgct tcattaaccg
     1741 cggccaccct ggcacatgtc tcgagcctgg cgggcaacct gaccttacta ggcatcatcg
     1801 ccctatttct gggggttggc gcctggcgta aagtggccgt ctacgaagcg tttatcgaag
     1861 gggccaaaca aggatttgat attgccaagg acttgctgcc ctatctggtg gcgatgctgt
     1921 gcgccattgg tttgctacgc agcgccggtg cagtggactt tctattggat ggtgttcggt
     1981 ttgtagtcga gcttgtgggc ggtgacaccc gctttatcga tggactaccc accgcattca
     2041 tgaagccctt gtcaggaagt gctgcgcgcg ccatgatgat cgaaaccatg cagttccatg
     2101 gtgttgacag cttcgcaggg ctactggctg ctaccttgca aggtagtacc gagaccacct
     2161 tctacgtact tgccgtgtat tttggggcgg tgggtattca acgagcccgc catgcagtgg
     2221 gttgcgcatt agcggctgat tttgcgggca ttgtcgccgc gattctggca tgctatgcct
     2281 tctttggtta aatactgaat ccctgtgaac atcgtcatcg cccccgactc attcaaagaa
     2341 agcctgtctg ccaccgacgt ggctcaagcc atcgccgccg gcattcaagc cgtcataccc
     2401 caagctcaag ttcactgctt acccatggcc gacggtggtg aagggacatt agacgccgtc
     2461 ttggcggtca ccggtggaga gcgacgcgaa ctcgaggtca ccgatgcact cgggcgcccc
     2521 cgcttggcgc aatggggctg gctgcctgat gagactgccg ttatcgagat ggctagtgcc
     2581 gctgggctag aacacattgc tagcgccgac cgtgatccag cccgagcaga cactcatggc
     2641 gtgggcaagc tcatcttggc tgcgcttgat gccggtgcca aacagattgt gctgactgcc
     2701 ggcggctcag ccaccaatga tgcgggcagt ggcatgttgc gtgcactagg actgcagttt
     2761 tttgatcggc acgatatgcc gcttgcaccc ggtgggatgg cactggcaaa cctcgcacga
     2821 ctcgatgcca gtgcgctaga cgcacgttta gcctcagtgg aaatcaccgt tgcgacggac
     2881 gtgcgcaatc cgctgtgcgg cccggaaggc gcatccgcca tctttggtcc ccaaaagggt
     2941 gccacccctg aattggtacg cgagcttgac caagcacttg gacagtttgc ccacatcaca
     3001 actcaaacca ctggccagga tatgcaaaac cacccaggtg cgggtgccgc cggcggctta
     3061 ggtttcgcgg cattagcgtg gatgggcgcg cgcatgcgcc caggcgtcga agtagtggcg
     3121 caactggcca atttagaaca ggcggtttcc caagcggatc tggtgtttac gggcgaaggt
     3181 cgtatggatg cacagacctt gcaaggtaaa acgccttggg gggtgatgcg tattgccaaa
     3241 gaacaccacg taccggtgat tgcgattacc ggcagcctag gacagggcta tcaagccctt
     3301 tatgaggcgg ggttaaccgc tgctttcagc ttggccaatg gaccaatcgc gctcgatgat
     3361 gccatcgcgc aggcgccggc tttgttacaa agccgcgcta ccgacatcat gcgtttgtgg
     3421 ttgttggcaa cgaatcggac ggcgccagcc gctgcgccaa cgcatcgctc atccgaataa
     3481 acccagccac atcgacctgt tcagcgcgag cagtcggttc tacgccaatc tcatcccacg
     3541 ggatcaggtt cgtccaatcc cctagtgctc gacgcaacat ttttcttcgc tgcgcaaagg
     3601 cacgctgcac taaattagca aacaacgcct catcaacagc gcgtgtccgt gtagagggca
     3661 atggcaccat ccgaaca
//
LOCUS       DATBNL010000028         3663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_129901, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000028 DATBNL010000000
VERSION     DATBNL010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129901"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VIC30_00455"
     CDS             complement(<1..545)
                     /locus_tag="VIC30_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013093918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY7802898.1"
                     /translation="MKQHKQQALPIELALQGGGAHGAFTWGVLDRLLQEPTLRVEGIS
                     GTSAGAMNAAVLASGFAVGGADGAREALTAFWRRVSDAALLSPLKRTPLDILLGRLSP
                     GNSPALRAMEWTSRTFSPYELNPMGWNPLRPILEDSIDFNSLKSSPVKVFITATCVNT
                     GQPRIFHNDEASADALLASAC"
     gene            complement(560..1039)
                     /locus_tag="VIC30_00460"
     CDS             complement(560..1039)
                     /locus_tag="VIC30_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018574768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEY7802899.1"
                     /translation="MRASKVRTLSLTNGVQPHGWWLRSALFVCLLFAAGVASAAQNVT
                     LKVYQDPNCGCCGAWVEYMQAEGFTVQAIKTSNVNAYKEQYGVPPKLSSCHTAVVEET
                     GQVIEGHVPANAVRKMLTNPSVKGVSAPGMPMNSPGMGEMDGNLVTVDFQGQAFSRD"
     gene            1303..1962
                     /locus_tag="VIC30_00465"
     CDS             1303..1962
                     /locus_tag="VIC30_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015876218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY7802900.1"
                     /translation="MLPYRIPSLKSRRLAKVSIGKRVKATGRRADLQAFLGEWARRPL
                     RVASITPSSRRLGDLVTSEITNDQGPVLVLGPGTGVFPQALLRRGIAPETMALVELNP
                     RFFELLTKRFPAVHILNADAATADLETFGYEQPFSAAISGLGLLSMKRHMVREILKNC
                     FKHMVDGGALYQFTYGVRCPVPVEVMNELGLRADKIGWVAMNLPPAGVYRISRVSKSN
                     K"
     gene            2580..3338
                     /locus_tag="VIC30_00470"
     CDS             2580..3338
                     /locus_tag="VIC30_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020750594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEY7802901.1"
                     /translation="MPIISYLRGARLRPWCSLVTLRSTLLATLLVTLVSLLAADGALA
                     HAIAQGDKGYIQEITGVHLMPFVYLGAKHMFTGYDHILFLLGVVFFLYRIQHVALYVT
                     LFAIGHSTTMLLGVYFNIGINSYIIDAIIGLSVVYKALDNLGAYQRWFGFQPDPKAAT
                     LIFGLFHGFGLSTKIIEYDLSPDGLVPNLLAFNVGVEIGQIAALSAILIVMGYWRRTT
                     GFFKHAYTANVIMMSAGFLLTGYQLAGYYVSQGV"
     gene            3341..>3663
                     /locus_tag="VIC30_00475"
     CDS             3341..>3663
                     /locus_tag="VIC30_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009664868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transmembrane anchor protein"
                     /protein_id="HEY7802902.1"
                     /translation="MYNTNMPSRADLPSSGQLLRSTILALIAAIVILVTIVLPSEYGI
                     DPTGIGQKLGLVEMGNIKTQLAAEAQADAQAKQQVATATTPAASGKVTAPAPASTSTA
                     AAPAPA"
BASE COUNT          860 a         1052 c          907 g          844 t
ORIGIN      
        1 aaacaagccg atgcaagcaa cgcatccgca ctggcctcat cgttatgaaa tatgcgcggc
       61 tggcccgtgt tcacacaagt cgccgtaata aaaaccttaa ccggagagga cttcaagcta
      121 ttaaagtcga tggaatcttc gaggatgggc cgcaacggat tccagcccat ggggtttaat
      181 tcgtaaggcg agaacgttct cgatgtccac tccatggctc gaagagctgg ggagttacct
      241 ggactcaaac gacccaataa gatatcgagt ggtgtgcgct ttagtggact gagcaacgct
      301 gcatccgaga cgcgacgcca gaatgctgtc agcgcttcac gggccccgtc tgcgcctcca
      361 acagcaaaac cactggcgag caccgcggcg ttcatcgcac ccgcagacgt cccagaaatg
      421 ccctcgacgc gcaaggtcgg ctcctgtaac aagcgatcaa gcacccccca agtgaatgcc
      481 ccatgtgcac ccccaccttg cagggcaagc tcgatgggta aagcctgttg tttgtgttgc
      541 ttcacgagcg gatcacgctt taatcacgtg agaaagcctg gccctggaag tcaactgtca
      601 ccaagttacc gtccatctca cccataccgg gcgagttcat cggcataccc ggggcagaca
      661 cacccttgac cgaaggattg gtcaacatct tgcgcacggc gttggctggt acgtggcctt
      721 caatcacttg acctgtttct tcaacgactg ccgtgtggca agaagaaagt ttgggtggca
      781 cgccatactg ctctttgtaa gcattcacat tagaggtttt aatggcctgc actgtaaagc
      841 cttcagcttg catgtactcg acccaagcac cacaacagcc acaattgggg tcttgataga
      901 ccttaagcgt tacgttttgt gctgcgctcg ctacgcctgc ggcaaacagc agacaaacga
      961 acaaggcgct gcgcagccac cagccatgtg gttgaacacc gttggttagg ctcaatgttc
     1021 tgacctttga cgctctcatc gtcttactcc tttcgttcaa gcttgactca ctatcggctg
     1081 gcacacgcac acagcccgca gtccaaaatc cacttattac tctttatagc gcgatacaca
     1141 gatcacggtt tggttacacg ttctaccgtg tctggtattt cgctttaata aattcggctt
     1201 caacatcggg ggcaacaaac atggcagccg cagcatatgg acgcttcccg tgccacaatg
     1261 ctaatctaaa ttcagtgctt atccgctctc acatccgctt ttatgctgcc ataccgaata
     1321 ccgtcactca aaagtcgccg cctagccaag gtgtccattg gcaaacgcgt caaggccaca
     1381 gggcgacgcg ccgacctaca ggcatttctt ggcgaatggg ccaggcgacc actgcgtgtg
     1441 gcttccatca cgccatcgag tcggcgtctc ggtgacttgg tcactagcga aatcaccaat
     1501 gaccagggtc ctgtgttggt attggggcct ggcaccggcg tattcccaca ggcgttgttg
     1561 cgccgcggca tagcaccgga gaccatggca ctagtggagc tcaacccccg gttttttgag
     1621 ttgctgacca aacggtttcc ggccgttcat atcttgaatg ctgacgctgc cacggcagac
     1681 ctcgagacat ttggctatga acagcctttt agcgccgcaa tcagcggctt gggactttta
     1741 tcgatgaagc gccacatggt gcgcgagatt ttaaaaaact gcttcaaaca catggttgac
     1801 ggtggtgcgc tttatcagtt cacttacggc gtacgttgtc cagtgccggt tgaggtgatg
     1861 aatgagttag gcttacgcgc cgataaaatc ggctgggtgg ccatgaatct gccaccggct
     1921 ggggtttacc gtatcagccg cgttagcaaa tcgaacaagt gattagagaa tttcaagtca
     1981 catcagcccg aaaaagaaca taacgtttca cacaggcaga gcagattgca ggcaagtcag
     2041 acgcacttac cgatgtcaag gcttgacttc aagcagccaa tccggcgctt gcgacgcttg
     2101 cgttggtttc tgatgtatct gctcgtgggt atgatgtcat tgtcagtgcc actggctgct
     2161 tggagccagt acacaagcca cgggcataca acccaacggc ttcactcatc tgatcacggc
     2221 acactggcgc atgcctcagc ggcagagtca ggggcaaacc atggccatac tcaccaggct
     2281 actgggactt gcgcaaactt ctcaggtcat gatcatgggc ataatccctt cgatcactcc
     2341 catgagaccc agcacccacc accggacctg acaattaaat atttaactgc cgttcacccg
     2401 tgggacaacg ggataaacat ccgccaacca cttggcagtg tcgaacgagt cgaacgcccg
     2461 ccaagaagcc gcctgcagtt ctgaagactg acttgcgtca cgtgtcacaa ctgagctaac
     2521 aagcttcaga acacactaca aagacgctct acttgactga atctctcagt ggggactcta
     2581 tgcctatcat ctcttatttg cgcggcgctc ggctgcgacc atggtgctcg ctcgttacgt
     2641 tgcgctctac gttgctcgcc actttgctag tgacattggt atcactgctc gcagcagacg
     2701 gcgcgcttgc acatgccatc gcacaaggcg acaaagggta catccaggaa atcacgggtg
     2761 ttcaccttat gccctttgtc tatctcggtg ccaaacacat gttcaccggg tacgaccaca
     2821 ttctgttttt gttgggcgtg gtgtttttct tgtaccgcat tcagcacgtc gcactatatg
     2881 tgacattgtt tgccatcggt cactcaacca ccatgctgct tggggtgtat ttcaacatcg
     2941 gcatcaatag ctacatcatc gatgccatca tcgggttgtc tgtggtttac aaggccctcg
     3001 acaatcttgg tgcctatcaa cgctggtttg gatttcagcc tgaccccaaa gcggccacgc
     3061 tgatatttgg gcttttccat gggtttggtc tgtcgaccaa gatcatcgag tacgacctgt
     3121 caccagatgg tttggtgccg aatttgctgg ctttcaacgt cggagtggaa atcgggcaga
     3181 tcgcagcgct tagtgccatt ttgattgtga tgggctactg gcgtcgcacc acaggtttct
     3241 ttaaacacgc ctatacggca aacgtcatca tgatgagtgc tggcttttta ttgacaggct
     3301 atcaactcgc cggctactac gtctcgcaag gagtctaacg atgtacaaca ccaacatgcc
     3361 aagccgagcc gacctaccaa gctctggcca attactgcgg tcaaccatcc tggcactcat
     3421 tgccgccatc gtgattctgg tgaccatcgt tctaccttcg gaatacggca ttgaccccac
     3481 gggcattggc caaaaactcg gtttggtcga gatggggaat atcaaaaccc agctcgccgc
     3541 cgaagctcaa gctgacgccc aagcaaaaca gcaagtggca acagccacga caccggcggc
     3601 ctcaggcaaa gtcaccgcac cagcaccagc atctacatcg actgcagcag caccagcacc
     3661 agc
//
LOCUS       DATBNL010000029         1745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_484, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000029 DATBNL010000000
VERSION     DATBNL010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1002)
                     /locus_tag="VIC30_00480"
     CDS             complement(100..1002)
                     /locus_tag="VIC30_00480"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7802903.1"
                     /translation="MNKIRTPRVTFNQLRTVEAVARLQSVTHAARELHLTQPTVSAQL
                     QDLQMALETPLFEPVGRGIRPTPAADLLRETALDLFARWQRFQEDLLALQGLERGTLR
                     IAGVTTTEYFIAQWLADYSVNHPGIDIDLAVDNRDAVVNRLMNDDIEIAVMMMPPAQL
                     SLASVKVMHNQLVLIGAKDHPWAQQKRLPRQALNHQPLLMREHGSGTRLATEAYLREH
                     DLKPVVRATLGSNEAIKHAVATGLGLAVVSEHVLPKKPSSEGIAVLSVTGFPLKRQWQ
                     LVWRKDRRLSLAAQTFIDEVSGRY"
     gene            1102..>1745
                     /locus_tag="VIC30_00485"
     CDS             1102..>1745
                     /locus_tag="VIC30_00485"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEY7802904.1"
                     /translation="MSALTPITVAHGDGIGPEIMDATLRVLEAAGAKIAPEFIEIGQS
                     QYLSGHSTGINPSAWESLRRTKVFLKSPITTPQGGGFKSLNVTIRKTLGLYANIRPCV
                     SYAPFVSTLHPDMNIVIVRENEEDLYAGIEHRQTDEVYQCLKLITRPGCERIVRYAFE
                     YALRHGRRHVTCMTKDNIMKMTDGLFHQVFDEIAPQYPTIETDHMIIDIGAARLA"
BASE COUNT          445 a          481 c          407 g          412 t
ORIGIN      
        1 ccctcttact gcgatgtcca tgtatagcct actgtagcta aagccgcact taaatccctg
       61 cagtagttct tagggtcatt gggttgacca accccaccac taataccgac cactgacttc
      121 atcgataaag gtctgcgctg caagcgacag cctccggtcc ttgcgccaca ccaactgcca
      181 ctgtcgctta agaggaaatc ccgtcacaga caacaccgca atgccttcgc tagatggttt
      241 tttaggcaat acgtgttcgg acaccactgc tagccctaag cccgtggcca cggcatgttt
      301 gatggcctca ttgctgccaa gtgttgcacg aaccactggt tttaagtcat gttcgcgcag
      361 gtaggcttca gtggccagtc gcgtacccga gccgtgctcg cgcatcaaca agggctggtg
      421 gttcagcgcc tgtctgggca accgcttttg ttgtgcccaa ggatgatcct tggcacctat
      481 tagcaccagt tggttatgca tcactttcac gctagctaac gacagctgcg ctgggggcat
      541 catcatgacc gcaatctcaa tgtcatcatt catcaatcga tttaccactg cgtcccggtt
      601 atcaacagcc aaatcgatat cgatacctgg atgattaacg ctgtaatcgg ctaaccactg
      661 agcaataaag tactcagtgg tggtcacgcc agcaatacgc aatgtgccac gttcgagccc
      721 ttgcaaagca agcaagtctt cttgaaatcg ttgccagcgg gcaaacaaat caagggcagt
      781 ctcacgcaac aagtcagccg ccggggttgg tcgaataccg cgccccacag gctcaaacaa
      841 tggggtctcg agtgccatct gaaggtcttg tagttgcgcc gataccgttg gctgtgttag
      901 gtgcagctcc cgtgccgcat gagtcacaga ctgcaaccga gccactgcct cgacggttct
      961 aagctggttg aaggtaacac gtggtgtacg aatcttattc ataggtataa acctatcata
     1021 tttattagaa atgattgttt ttatttaatc agtttttaaa acaaaatgac ggtgtttcaa
     1081 ccaacaaatg agatgcaaat aatgagcgca ctaaccccta ttactgtggc ccacggcgat
     1141 ggcattggtc ctgaaatcat ggatgccacc ctacgcgttc tagaggctgc tggcgccaag
     1201 atcgcacccg agtttatcga gattggtcaa agccaatatc tgtctggcca cagtacaggt
     1261 atcaatccaa gcgcctggga aagtttgcgc agaaccaaag tctttctgaa gtcgcccatc
     1321 accacaccac aaggcggtgg cttcaaaagt ctaaatgtca cgatccgcaa aaccttgggg
     1381 ctatatgcca acattcgccc gtgcgtcagt tatgcgccgt ttgtctcaac gctacatccc
     1441 gacatgaata tcgttatcgt ccgggaaaac gaagaagacc tatacgccgg aatcgaacat
     1501 cggcaaaccg atgaggtgta ccagtgccta aaactcatca cacggcctgg ctgcgaacgg
     1561 attgtgcgct atgcctttga gtacgccttg cgtcatggac gccggcacgt cacttgcatg
     1621 accaaagaca acatcatgaa aatgaccgat ggcttgtttc accaagtctt cgatgagatt
     1681 gcaccgcaat atccaacaat cgaaactgac cacatgatca tcgatatcgg tgccgctcgc
     1741 ctagc
//
LOCUS       DATBNL010000030         1946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_109974, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000030 DATBNL010000000
VERSION     DATBNL010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109974"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1410
                     /locus_tag="VIC30_00490"
     CDS             <1..1410
                     /locus_tag="VIC30_00490"
                     /inference="COORDINATES: protein motif:HMM:NF025314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4214 domain-containing protein"
                     /protein_id="HEY7802905.1"
                     /translation="GPRLLAAKLDAYSDLGEGSPSWQTASTENSGSDLYGTQAAYRLR
                     LYTSAGFSPDGIASISPDDFAKFFQIIGLDDQGQEVLLTQANVAYTIAGFGEVTILGI
                     ADTGLQQSSYDEAYVEDHDNQYDIILAGDAAAIAQLQSVRMPSGGDYSPVYNPGGPGS
                     DPENNPPGPFTVPSSDQTIAISRSGEAADSGDDSAVVSTVGSTVGLVTYVEVDGVVTR
                     DADTGQPIGADWGLAVFDSATGHTVNQYVDPTGKVFYSSFAVSPDFSIVLTEAQPSDY
                     SRATNDQITGTGGIDSVAFSGDMDQYVRTGSLPSLVSQDLVARRDATDQLTDVERLLY
                     ADVALALDIDGNAGSAFSMYGAFDRAPDLQGLGFWIDAMDSGAPIDQVAQGFVDSAEF
                     VSDYGVAPTDESYVRELYQNFLDRAPDEMGFAYWVDSLQSDAMDFADVMAGFASSSEY
                     QGMIASQISQGIQYDVWMG"
     gene            1738..>1946
                     /locus_tag="VIC30_00495"
     CDS             1738..>1946
                     /locus_tag="VIC30_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005665688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802906.1"
                     /translation="MGNPALTTQAANDPDTLETEEWMQALAAVLEREGPERAHYLLER
                     LIDQARRSGTHIPFSPNTAYLNTIS"
BASE COUNT          431 a          523 c          552 g          440 t
ORIGIN      
        1 ggcccacgtc tgttggcagc caaacttgat gcctattcgg atctcggtga gggcagccca
       61 tcgtggcaga ctgcatcgac cgaaaacagc ggctccgatc tgtacggtac tcaggctgcc
      121 tatcgattgc gcctgtatac cagcgcggga ttctcgcccg acggcattgc cagcatctcg
      181 ccagacgatt ttgcaaagtt cttccagatc atcgggctcg atgaccaagg ccaagaggtg
      241 ctgttaaccc aggccaatgt ggcctacacg attgcagggt ttggcgaggt gacgattttg
      301 ggtattgctg acacgggttt gcagcaatct tcctacgacg aggcctacgt tgaagaccat
      361 gacaaccagt acgacatcat tctcgctggc gacgctgcgg ccatcgcgca attgcagtcg
      421 gtcaggatgc catccggtgg tgactactca ccggtctata accccggtgg accgggcagt
      481 gatcctgaga acaacccgcc cgggccattc acggtgccaa gttcagatca gacgattgcc
      541 atttcacgct cgggtgaagc ggccgacagc ggggacgaca gtgccgtggt cagcacggtc
      601 ggcagcacgg tgggactcgt gacttatgtt gaagtcgatg gggttgtgac tcgtgacgca
      661 gacaccggtc aacccattgg tgctgattgg ggtttggcgg tgtttgactc agccaccggc
      721 catacagtga atcagtacgt tgacccgacc ggcaaggtgt tctacagctc gtttgccgtg
      781 agtccggatt tctcgatcgt gttaacagag gctcaaccaa gcgattattc acgggcaacc
      841 aatgatcaga tcaccggaac tggtggcatc gattcagtgg cctttagcgg tgacatggat
      901 cagtacgtgc gcaccggctc cctgccgtca ttggtctcgc aagacttggt ggcgcggcgt
      961 gacgccactg accaactcac tgatgtcgaa cgtctgctgt atgccgacgt ggccttggcg
     1021 ctagacatcg atggtaatgc cggttcggcc ttcagcatgt atggggcttt tgatcgtgcg
     1081 ccggatcttc aaggccttgg tttttggatc gatgcgatgg acagcggggc ccctattgac
     1141 caagtggcac aaggctttgt cgacagtgct gaatttgtgt ctgactatgg cgtggcccca
     1201 accgatgaga gttatgttcg cgagctttat caaaactttc ttgaccgtgc ccccgatgaa
     1261 atggggtttg cttattgggt agatagtttg cagtctgatg ccatggactt tgcagacgtg
     1321 atggccggct ttgccagttc atcggagtat cagggcatga ttgccagtca aatcagccag
     1381 ggcattcaat acgacgtgtg gatggggtga gcgatttgat gtgcaacggc aacgggtcaa
     1441 ggcgttctgg ctcgttgtcg ctgcagatca gcgcggggct gtgtcagaac ctcacaagta
     1501 gcggcttgac acccacgtcg tgaccccaga aaagttgctg tatccaatca agggacattc
     1561 tttggacaga acaccgcaaa gccaaaacaa cgctggcggc aagacatatt tcacaatata
     1621 aaaagttaaa ccaaatggtg aaattttcct tgccctgtca tcgagtagcc cctagaatca
     1681 agtcacaata gatcatgcgt catgtttcga gtggcgcgtt caacaaagga gatggtaatg
     1741 ggcaaccccg cactgacaac tcaggccgct aacgaccccg acaccctcga aaccgaagag
     1801 tggatgcagg cgttggccgc ggttcttgaa cgagaagggc ctgagcgggc acactatctt
     1861 ctcgaacgct tgatcgacca agcccgtcgc tccggcactc acattccgtt ctcgcccaat
     1921 accgcctacc taaacaccat ctcgga
//
LOCUS       DATBNL010000031         1787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_139852, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000031 DATBNL010000000
VERSION     DATBNL010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139852"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1275
                     /locus_tag="VIC30_00500"
     CDS             <1..1275
                     /locus_tag="VIC30_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018915312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY7802907.1"
                     /translation="ATAAMALLMVTLVRDHGLQYLLAATVLTGVLQIIAGWIRVATLM
                     RFVSRSVITGFVNALAILIFMAQLPELTDVSWVVYAMTAAGLGIIYLLPYLTRAVPSP
                     LVTIVVLTIVAMVLDLDIRTVGDMGDLPDSLPVFLIPNIPLNFETLQIIFPYSLTMMV
                     VGLLESLLTATIVDDLTDTKSNKNRECVGQGVANITTGFIGGMAGCAMIGQSVINIKS
                     GGRGRLSTLTAGIALLILIVFLGDWVAQIPMAALVAVMIMVSIGTFDWQSVIKLREHP
                     KSSSIVMLATVLVTVLTHDLAKGVLVGVLASGFFFAAKVGRILAIRSQAEDEGRKRRY
                     VVTGQVFFASAEQFINAFDFREVIERVTIDVSRAHFWDITAVSALDKVVLKFRREGTE
                     TEVVGLNEASATMIDRFAVHDKPDAEDKFVSH"
     gene            1457..>1787
                     /locus_tag="VIC30_00505"
     CDS             1457..>1787
                     /locus_tag="VIC30_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011518937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7802908.1"
                     /translation="MNNQMNDPQNNPNTVANSDPNTNPTTDPTTANQTAKRSTVLACV
                     DQSPYATYVTDYAAWAAKRLNTGLELLHVIDRNPELGPDQDHSGAIGFNDQENLLKKI
                     VDEDEQRS"
BASE COUNT          423 a          500 c          459 g          405 t
ORIGIN      
        1 gccactgctg ccatggcgtt gctcatggtc acgctggtgc gcgaccatgg actgcaatac
       61 ctgctagccg ccacggtact gactggtgtg ctgcagatta tcgcgggctg gatacgagtg
      121 gccacactta tgcggttcgt atcacgctcg gtcatcaccg gttttgtgaa tgcgctggcc
      181 attttgattt ttatggcgca gttgcctgaa ctaactgatg tctcttgggt ggtctacgcc
      241 atgaccgctg ccgggcttgg catcatctac ttactgccct acctcacccg tgccgtaccc
      301 tcacccttgg tgaccattgt ggtgctaacg attgtggcca tggtgctaga tctggacatc
      361 cgcaccgtcg gtgacatggg tgacttaccg gatagcctgc cggtgtttct gataccgaac
      421 attccactga actttgaaac gctgcaaatc atttttccct attcactgac catgatggta
      481 gtcggtttgc ttgagtcact tttaaccgca accattgtcg atgacctcac cgacaccaaa
      541 agcaataaga accgcgagtg tgtcggccaa ggggtggcta acatcaccac gggctttatt
      601 ggtggcatgg ctggttgcgc catgattggc caatcggtca tcaacataaa atccggtggc
      661 cgtggccgac tctccacact gaccgctggt attgcgctac tgatcctgat cgtctttctg
      721 ggtgactggg tcgcacagat acccatggcc gccttggtcg ccgtcatgat catggtgtcc
      781 attggtacct ttgactggca gtcagtgatc aaacttcgcg agcaccctaa aagctcaagc
      841 atcgtgatgc tggccacagt cttagtcaca gtgctcaccc acgatctggc caaaggcgtc
      901 ttggtgggtg tattggcatc gggatttttc tttgccgcca aggttggacg gattttggcc
      961 attcgctccc aagctgaaga cgaaggccgc aagcggcgct acgtggtcac cggtcaggtg
     1021 ttttttgcgt cggctgagca gttcatcaac gcctttgatt tcagagaagt cattgaacgc
     1081 gtcaccattg atgtcagtcg cgcccacttc tgggatatca ccgcagtcag tgccttagac
     1141 aaggtggtgc tcaagttccg ccgtgaaggc accgagaccg aagtcgtggg gcttaacgaa
     1201 gcgagcgcca ccatgattga ccgatttgcg gtgcacgaca aacccgatgc cgaggataaa
     1261 tttgtgtcgc attgagggac tgcactgagg tgctgcattg aggttctgta ctgagatgct
     1321 gcactgaggg gctgcaacta acaagcaccg ctaacctgcc aaaccagccc atgcgcctga
     1381 cggcgcatgg gcaagacaga cagaactgaa agacgaaact gaaagacaaa accaacagac
     1441 aaaactgatt gatgccatga ataatcaaat gaatgatcca cagaacaacc caaacaccgt
     1501 cgcaaacagc gacccaaaca ccaacccaac caccgaccca accacggcaa accagacagc
     1561 gaaacgctct accgtgctgg cctgcgtaga tcagtcaccc tatgccacct atgtcactga
     1621 ctacgctgcc tgggctgcca aacggttaaa cactggccta gagctgctgc acgtcattga
     1681 ccgcaatcct gagctaggtc ctgaccaaga tcacagcggc gcaattggtt ttaacgatca
     1741 agaaaacctg cttaaaaaga tcgtcgacga agacgaacaa cgcagcc
//
LOCUS       DATBNL010000032         2640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_119953, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000032 DATBNL010000000
VERSION     DATBNL010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119953"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1052
                     /locus_tag="VIC30_00510"
     CDS             <1..1052
                     /locus_tag="VIC30_00510"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7802909.1"
                     /translation="LSLAMLGLALADLLDPLLVIALSTITGALKPSDIMIRFTLIAQA
                     LKPSQLVGALGISRVTVDSARMAGAIAGVGVFTLFGIAGTYVLILSMYLTSLALSFGV
                     VGRDAATIEAKTPASVLQDLRLGVQYVWHNQVLRGCFLLAFWVNVFAYPLVLGLLPYV
                     VNNVFMATETLLGVLGAAYAFGSLLGSLLVSSNRIAMGAGRLMILGAIAWFAAGAVFA
                     VNDVVIIGVVLLVVIGAAQSLCVTPLAGVMLRATEPHYRGRVMGMRILAILGLPLGLM
                     MSGPLIDAFGFAWTVGIYSLLGVACAVSMIWIWRDSLWDKTCLANTPTETRADTTADA
                     ATDHPIKLASAASSD"
     gene            1117..1839
                     /locus_tag="VIC30_00515"
     CDS             1117..1839
                     /locus_tag="VIC30_00515"
                     /inference="COORDINATES: protein motif:HMM:NF023197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HEY7802910.1"
                     /translation="MKLATSKQLQQEQTQTRWSRLGLAVAASLVVAGCATGTKTLDPQ
                     LESGYLDGYSRLQPIESGEEGVSIYRYKNPNVDFSKYDAVIIEPVVIYQTADADAAAD
                     GLSEQTLYQVRQQITDSIRTAVAKQAKVVTQPGPDVANVSIAITGAQTLSDGFKPTDL
                     IPVRAVLNVASKATGLDSKNAMLVVEAKVNDSQSGELIGQALYTVSGESFRMESSSVE
                     AFEKLADKWVKTALRVAAGRQP"
     gene            complement(2007..>2640)
                     /locus_tag="VIC30_00520"
     CDS             complement(2007..>2640)
                     /locus_tag="VIC30_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019560897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEY7802911.1"
                     /translation="PLFLAYSAVMIDPEMVKNLMSVDSQLILPTLVMHHMPFVMQVVF
                     FGALLSVIMSTASGTLLAPSVTFTENILKNFIPRINDRQLLWTTRATVLVFSIIVTTY
                     ALRTGDSIHKMVENAYQITLAGAFVPLVAGIFWKKSSNLGAGLSILFGLSTWLVLSVT
                     GVDDPVPPQLVGLMAGIVGMVIGTLIHPRKNIGTHTAPNSTVQPQQPSAQ"
BASE COUNT          572 a          663 c          754 g          651 t
ORIGIN      
        1 ttttatcttt ggcaatgctg ggtttggcgc ttgcggactt gctcgacccg ctgctcgtca
       61 ttgcgctatc tacgatcacc ggggcgctta agccttcgga catcatgatt cgtttcactt
      121 tgatcgccca agcgctcaag ccctcgcagc tggtgggtgc gctcggaata tcgcgtgtga
      181 cggtggactc ggcgcgcatg gccggcgcca ttgcaggcgt tggggttttt acgctttttg
      241 gtattgctgg gacttacgtc ttgattttgt ccatgtacct cacgagcctg gcattgtcct
      301 ttggtgtggt cggtcgcgat gcggccacca tcgaggctaa aaccccggct tctgtgcttc
      361 aggatctgcg cttgggtgtg cagtacgtct ggcacaacca agtgttgcgg ggctgttttt
      421 tactggcatt ttgggtcaat gtctttgcct atcccttggt gcttggcctc ttgccttatg
      481 tcgtgaacaa cgtgttcatg gccactgaga ccttgcttgg tgtgctcggt gctgcgtatg
      541 catttggctc gctactgggg tctctattag ttagcagtaa ccggatcgcc atgggcgcag
      601 ggcgcttgat gatcttaggc gcgatcgcgt ggtttgcagc cggtgcggtg tttgccgtca
      661 atgatgtggt gatcattggt gtggtgctgc tcgtggtgat tggtgcagca cagagcctgt
      721 gtgtcacgcc actggctggc gtgatgctgc gtgccactga accgcactat cgcgggcgtg
      781 tcatgggcat gcggattctg gcgattctgg gcttgccgct cggactcatg atgtctggcc
      841 cgctcattga cgcgtttggg tttgcctgga ccgttggtat ctattcattg ttgggtgtgg
      901 cctgcgcggt gtcgatgatt tggatctggc gtgatagctt gtgggacaaa acgtgccttg
      961 ccaacacacc cacagagacg cgtgcagaca ccactgcaga cgcggccaca gatcatccca
     1021 taaaactagc atcagccgcc tcaagcgatt aatatgcggt atagcgctat ttcatagggt
     1081 gttggcgtca ccaaccacga caatgaggaa atacgcatga agctagcgac atcgaagcaa
     1141 ttacaacaag aacaaacaca aacccgctgg tcccgtctcg gccttgccgt agccgcctca
     1201 ttggtggttg ccggctgtgc gactggcaca aaaaccctgg acccgcagct tgagtcaggc
     1261 tatctcgatg gttacagtcg cttgcagccc attgagagtg gcgaagaagg ggtgtcaatc
     1321 tatcgctata agaaccccaa cgttgacttc agcaagtacg acgcagtcat catcgaaccc
     1381 gtggtgatct accagacagc tgacgccgat gcggccgctg atggtttgag cgagcagacg
     1441 ttgtatcagg tgcgccagca gatcacagac agcattcgta ccgctgtggc taaacaagcc
     1501 aaagttgtaa cccaacctgg tccagatgtc gccaatgtca gcatcgccat cacaggtgcc
     1561 caaacactgt ctgacggttt caaaccaacc gacttgattc ccgtgagagc cgtattaaac
     1621 gtagctagca aagccacagg cctagactca aaaaatgcca tgctcgtggt tgaagccaag
     1681 gtcaacgaca gtcaatcggg tgagctgatt ggtcaggcac tctacaccgt ctcgggtgag
     1741 tccttccgca tggagtcctc atcggtcgag gcttttgaga agcttgctga caagtgggtc
     1801 aagacagcac tgcgtgtggc ggctggtcgc cagccatagt ggcctgcatc tagatagctg
     1861 ctgtcgtagg tagctaattt gcgtctcgtt tcatatacca agggcagcgt cgagctgccc
     1921 ttggtgtgtc tcgagtagga tgaaacattc gaggtgttaa cagattgagg ccacgcatca
     1981 gaaacaggtc aatggcttat aagcaatcac tgagccgatg gttgttgtgg ttgaacagtt
     2041 gaattaggcg ctgtgtgggt gccgatgttt tttcgtggat ggatgagcgt accaattacc
     2101 ataccgacga tacctgccat gagtcccacg agttgcggcg ggacgggatc atcaacgcca
     2161 gtgactgaca gaacaagcca cgtcgaaagc ccaaaaagaa tcgatagacc tgctccgaga
     2221 ttgctggatt ttttccagaa aataccggct accagtggaa caaatgcacc agctagtgtg
     2281 atttgatagg cgttctcaac cattttgtgg atgctatcgc cagtgcgtaa agcgtatgtt
     2341 gtgacgatga tgctgaatac taaaaccgtc gcccgcgttg tccacaagag ctgtcgatca
     2401 ttgatgcgtg gtatgaaatt tttcaggatg ttttcagtga aagtcacaga gggtgcgagc
     2461 aacgttccgg atgcggtgct catgatcacg gaaagcaaag cgccaaagaa aacaacctgc
     2521 atcacaaatg gcatgtggtg catgaccaag gtcggcagaa tcagctgcga gtcgaccgac
     2581 atcaggtttt tcaccatctc ggggtcaatc atgacggcgc tgtaggccag aaacagcggc
//
LOCUS       DATBNL010000033         6902 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_80169, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000033 DATBNL010000000
VERSION     DATBNL010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6902
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80169"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1093
                     /locus_tag="VIC30_00525"
     CDS             122..1093
                     /locus_tag="VIC30_00525"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar nucleotide-binding protein"
                     /protein_id="HEY7802912.1"
                     /translation="MKTMLIAGFGDLGLAIAKQAQADPGYKNLSILALRRNPPQPTNL
                     LKPNESTNSELPPNVTWLAADLADRASIAAVLATHTQIDSVVYCAAPNERTEQAYRST
                     YVTGLQNLVGVLDDLDIKHTGGAPQKPYSQEPYPQKPYPQRPRILFVSSTAVYDSQAQ
                     GVFDETSPTEPRGFNGKVLCEAEAWLLSNWPEATVLRLSGIYGPTKQRLLQSIKEGQS
                     TTPDSEDYIANRIHLDDAARAVLHLLKGKHSGIFLGTDSHPIPLRALYETLADLLGAP
                     APGIAAPSPMMGKKQLSNQKLLRTGFELKWPDCIEGYKAMIASRDQI"
     gene            complement(1120..1638)
                     /gene="greB"
                     /locus_tag="VIC30_00530"
     CDS             complement(1120..1638)
                     /gene="greB"
                     /locus_tag="VIC30_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006462595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEY7802913.1"
                     /translation="MSDTTVKNYITRQGYDRLRAELVHLMNVERPEVVQIVSWAASNG
                     DRSENGDYIYGKKRLREIDRRIRFLTKRLEVAHVVDPASQAGLDQVFFGATVTYSNDQ
                     DEQVTVTIVGVDEVDPLHGRISWISPVAKALIKAREGDEVRLQTPEGPQTLLIESVSY
                     DPVQPDPSLTQS"
     gene            complement(1667..2545)
                     /locus_tag="VIC30_00535"
     CDS             complement(1667..2545)
                     /locus_tag="VIC30_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009521148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEY7802914.1"
                     /translation="MSLVSLVASRCTVINADLHCHSLQSDGVFTPEELAMRAKSNGVD
                     LWALTDHDAVSGIASARSAAKQHDLTFVSGVEISVTFAAQTVHVVGLGIDETHPVLLA
                     GLEQLCRERDARALLIADKLAEAGFDGTYEGALAHVQNPALVSRTHFARHLYETGHVS
                     SMQDAFDLYLGDQGRAYVPTQWATLEEAVHWIVQSGGVAVIAHPGRYKYSDLQFDALF
                     KQFLAFGGQGIEVHTGSHRPDEYDYYAQVARDYGFMASIGSDFHGPTESRHDLGSIRP
                     LPRDLTPVWQALGVAH"
     gene            complement(2556..3488)
                     /locus_tag="VIC30_00540"
     CDS             complement(2556..3488)
                     /locus_tag="VIC30_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7802915.1"
                     /translation="MSGPRVNTVVCASPAGLHRMAYYEWGDPDNDDVVLCVHGLTRTG
                     RDFDVLAERLSHRFRVIAPDVVGRGLSDWLAQPLHYAVPQYTADMVCLLARVQPKSLR
                     WVGTSMGGLIALSYAGLLAQARTRQFELPPARQTATIDDGLIDIDRLVLNDVGPRIEA
                     PSLMRIGQYLTEATSFETFEQAVQYMKQTAASFGPHSDPQWEMLTRHYFVPSEGRWVK
                     HYDPSMALAFAGVTQDLVSQGEMMLWQAYRSINAPTLIMHGEQSDLLLTDTVQAMLAA
                     NPKARVHTVKGVGHAPSLIVEDQIDVVNGFLQAG"
     gene            complement(3636..6080)
                     /locus_tag="VIC30_00545"
     CDS             complement(3636..6080)
                     /locus_tag="VIC30_00545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEY7802916.1"
                     /translation="MHINVVAAAWLIGVCAAQQLPSLPGTNVMMVSGIVVSVVIWIIL
                     MACRYSPRAGSKTVAIAMSLSISLATCLAGMLWVVWQAELRLADRLASVEDNKVTRVV
                     VEVSDLPTDVSNGVRFTGVLQAPVPAGLPRRVMVFWAGACTRDCANVVAPGQRWRMAL
                     RFRQPRARLNFAGMDAESWLFQQGLRATTTVRGTPKRLPDATGWQPGIWIEQVRAHIR
                     ARLQGVLADEKEINVMVALAIGDQQGVSREDWEVFNLTGITHLVSISGSHVTLIAALG
                     ASALAAVYRRLRWRGRRLSERVPVRLVFVWAAGIFAFLYCLLAGWGVPAQRTFFMLAA
                     AAVGLSGRVPLSGTQAVLAAAWFMTVLDPWAVLSTGFWLSFGAMVILIVLADQVLAQS
                     PDELSRWQAIKTACVLGAKLQWVMTLAVTPVTIYLFQQVSISGLLANAWAIPWITFVA
                     TPAALLVSALTLLPISDAMLAPLAWLAHQALWLSLAPVRWLAGFDWLSIETPAIDIWT
                     LVLGLAGVAMGLMMPPWRGRWLAWLWLLPAVTGIPDKPAPGHWRLTAFDVGQGGAILV
                     QTHTQNLLFDTGWRYDDINAVDRVLLSELRAMGVKHLDRVVISHPDMDHIGGLERLEQ
                     VRTIGQLHGSGLQRADVLACQAGQRWRVDGVTFAFLHPDTDCSQKALKGRARNRCSCV
                     LSIVGKQHRAVLTGDIDTDVEQRLALRGIETHDVALVAHHGSSSSSALSWIEAVGAKH
                     AVIQAGHYNRFGHPHADVVYRWRQHGARVWVSSWHGGVQFESTPSGLAVRHARDERRR
                     YWHELAQTGSSPTIGW"
     gene            complement(6308..>6902)
                     /locus_tag="VIC30_00550"
     CDS             complement(6308..>6902)
                     /locus_tag="VIC30_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEY7802917.1"
                     /translation="NFVQTHRDDERLVAIGEIGLDFFVPEISHGTERQRQIEFYKAQL
                     DIAQQAKLPVILHVRKSQDELLKWLRRLPQPHQPHIGGIAHAFNGSFQQAHQFIELGF
                     ALGAGGAFTFTRAKQIRRLVTELSLEHWVLETDSPDMAPAWLEKGARNCPAQVAAIAK
                     ELAILRGLPVQTVLDQTAQTAMRVIPKLRDLWMPARQ"
BASE COUNT         1691 a         2089 c         1740 g         1382 t
ORIGIN      
        1 cgccacgcgc aaaggcaagc cgcagcaaaa gcaagcacgc aagcttcaag ccatgctgga
       61 tcgggtcggc ttgcctgcct tgcgcgagcg gttttttgtg ccaagccagt cggagagtta
      121 aatgaagacg atgctcattg caggtttcgg ggatctgggg ttagccattg ccaaacaggc
      181 ccaggccgat ccgggctaca aaaacctatc catcttggcg cttaggcgca acccgccgca
      241 gccaacgaac ctactgaagc caaacgaaag caccaacagc gagctgccac ccaatgtgac
      301 atggttagcc gctgacttgg cagatcgagc ctcaattgct gcggtgttag cgacccacac
      361 gcagattgat agcgtggtgt attgcgccgc gcccaatgag cgaaccgagc aggcctatcg
      421 ctctacctat gtcaccggcc ttcaaaactt agtaggcgtg ctcgatgatc tcgacatcaa
      481 acacactggc ggcgcccctc agaagcctta ctcacaggag ccttacccac agaagcctta
      541 ccctcaaagg ccacgcatct tatttgtctc atcaacggcc gtctacgaca gtcaggcgca
      601 aggggtgttt gacgaaacca gccccacaga gccacgcggc tttaatggca aagtgttgtg
      661 cgaagccgaa gcgtggttgc tgtcgaactg gcccgaggcg acagtcttgc gactatcggg
      721 catctacggg cccactaaac aacgtttact gcagtcgatt aaagaaggcc agtcaaccac
      781 accagactct gaagactaca ttgccaaccg tatccacctt gacgatgccg cacgcgctgt
      841 cttgcatttg ctcaaaggca aacacagcgg cattttcttg ggcaccgaca gtcaccctat
      901 accgctgcga gctctctacg aaacgcttgc cgacttactc ggcgccccag cacctgggat
      961 agctgcgccc tcacccatga tgggtaagaa acagctgtcc aatcaaaaac tgttaaggac
     1021 ggggtttgag ctcaagtggc cagactgcat cgagggctat aaggcaatga ttgcttctcg
     1081 tgatcagatt taacgttcac cttctcgtag cacacacgat caggactgag tcagggaagg
     1141 atcaggctga actgggtcgt aagacacgga ttcgatcagc aaggtttgcg gaccttcggg
     1201 cgtttgcaaa cgcacctcat cgccctcgcg cgctttgata agcgctttag ccaccggtga
     1261 aatccaactg atacggccgt gcaaaggatc cacttcgtcg acgccaacaa tggtgacggt
     1321 tacctgctcg tcctggtcat tgctgtaggt caccgtcgcc ccaaaaaaca cctgatcgag
     1381 tcccgcctgg ctggccggat caaccacgtg tgcgacttct aggcgcttgg ttaagaatcg
     1441 gatgcgtcga tcgatctcgc gtagccgttt tttaccgtag atgtaatcac cgttttctga
     1501 tcggtcgcca ttggacgcag cccaagaaac gatctgaacc acttcaggac gttcgacgtt
     1561 catcaagtgc acgagctcag cgcgcagtcg atcatagcct tgtcgtgtga tgtagttttt
     1621 aacggttgta tcgctcatgc tgcgggttcc aacttattgt gccaactcaa tgcgctacac
     1681 ctaacgcttg ccacaccggc gtgaggtcgc gtggcaatgg acgaatgcta cccaagtcat
     1741 ggcgactctc tgtagggcca tgaaagtctg agccaataga ggccataaag ccataatcac
     1801 gcgccacttg cgcgtagtag tcatattcgt ctggtcgatg actgccagtg tgcacttcga
     1861 taccctgacc accgaacgct agaaactgtt taaacaaggc gtcaaactgc agatcgctgt
     1921 atttgtagcg accgggatgg gcaatcactg caacgccacc agactgcaca atccagtgaa
     1981 cggcttcttc aagggtggcc cactgtgttg gcacatacgc acgaccctga tcgcccagat
     2041 agagatcaaa cgcatcttgc atagatgaga catgacccgt ctcgtacaaa tgccgggcaa
     2101 agtgagtgcg actgacgagc gccgggttct gtacatgggc caatgcgcct tcgtaggtgc
     2161 cgtcgaatcc agcctcggca agtttgtcgg caatcaacaa agcgcgtgca tctcgctcac
     2221 ggcacagttg ctcaagaccc gccaacaaaa ccggatgtgt ctcatcaata cccaaaccga
     2281 ccacgtgcac ggtctgagca gcaaaggtga ctgatatttc cacgccagac acaaatgtca
     2341 ggtcatgctg tttggctgca ctgcgcgcag atgcaatacc tgagacagca tcatggtccg
     2401 ttaacgccca aagatccacc ccattggatt tagcgcgcat ggcgagctct tcaggcgtaa
     2461 acaccccatc cgattgcagg gaatggcaat gtaaatcggc attgatcacc gtgcatcgcg
     2521 acgctaccaa actcaccaaa ctcaccaaac tcacctcaac ctgcctgtaa aaacccattg
     2581 accacatcaa tctgatcttc aacgatcaaa cttggcgcat gccccacccc tttgacggta
     2641 tggacccgtg ctttggggtt ggccgccagc atggcttgca cggtatcggt cagtagtaaa
     2701 tctgattgct ccccgtgcat gatgagcgtg ggtgcattaa tggagcgata tgcttgccaa
     2761 agcatcatct caccttggct aaccagatcc tgggtcacgc ccgcgaaagc cagcgccatc
     2821 gaagggtcgt agtgcttaac ccagcgcccc tcggacggca caaaatagtg tcgcgtcaac
     2881 atctcccact gggggtccga gtgcgggcca aacgaagcag cggtttgctt catgtattgc
     2941 accgcttgtt caaacgtctc aaaactcgtg gcttcggtca ggtattgacc gatacgcatt
     3001 aacgaagggg cctcgatacg tggaccaaca tcattgagta cgagtcgatc aatatcgatc
     3061 aacccatcat caatggtcgc ggtttgacgc gccggtggca actcaaactg acgcgtacgc
     3121 gcttgtgcca gcagcccagc gtacgacaag gcgatcaagc cccccatcga cgtgccaacc
     3181 cagcgcagcg acttaggctg cacacgggcc aacagacaca ccatgtcagc ggtgtattga
     3241 ggcacggcat aatgcagtgg ttgggccaac caatccgaca gacctcggcc caccacatca
     3301 ggcgcaatga cacgaaagcg atgcgacagt cgctcggcca gcacatcaaa atctcgtcca
     3361 gtgcgggtca agccatgcac acataaaacg acatcatcgt tatctggatc accccactcg
     3421 tagtacgcca tgcggtgtaa gccagcgggg ctggcacaaa caacggtatt gacacggggt
     3481 ccactcataa aaatcactcc ttggagatgc cgcttaaatt gatgccgctt agatcgattt
     3541 tttgcaatcc gcttgcgcac tgtctcaaat cctgcgttgc acaacctgaa ctgcacaatc
     3601 tgcactgcgc aacctgcact atgcaatctg tttcactacc atcctattgt aggggagctg
     3661 ccagtttgtg ccagttcatg ccagtagcgc cggcgttcgt cgcgggcatg gcgcacagca
     3721 agcccactag gcgttgattc aaactgcacg ccaccgtgcc agctcgacac ccaaacccgg
     3781 gcgccgtgct ggcgccatct ataaaccaca tcagcatgtg gatgcccaaa ccggttgtag
     3841 tgccctgcct gaatcaccgc atgcttggcc ccgacagcct ctatccagga caaagcagac
     3901 gagctcgatg aaccgtggtg ggccaccaac gccacatcgt gggtttcgat acccctcaga
     3961 gcaagccttt gttcgacatc agtgtctata tcgcccgtca aaacagcgcg atgctgttta
     4021 cccacaatgc taagcacaca gctgcaacgg tttcgcgcgc gcccctttaa cgccttctgg
     4081 ctacagtctg tatccggatg taaaaacgca aacgtcactc catcgactcg ccagcgttgc
     4141 ccggcctgac aggccaagac atcggctctt tgtagacccg agccatgcaa ttgaccaatc
     4201 gttcgcactt gttccagtcg ttctaacccc ccaatgtgat ccatatccgg atgggaaatc
     4261 accactcggt ctaagtgttt aacccccatg gcacgcaatt cagacaacag cacccgatca
     4321 acggcgttga tgtcgtcgta gcgccaacct gtatcaaaca acaggttttg tgtatgagtt
     4381 tgcaccagta tcgcgccgcc ctgcccgaca tcaaatgcgg ttaatcgcca atggcctggg
     4441 gctggtttgt ccggtatgcc ggtgacagct ggcaacaacc acagccaagc taaccaacgg
     4501 ccacgccatg gcggcatcat gagtcccatg gcaacaccgg ccaaccccaa caccagggtc
     4561 caaatatcaa tcgcaggcgt ctcaatcgat agccagtcaa acccagccaa ccaacgcaca
     4621 ggtgccagtg acagccacag cgcctgatgc gccagccaag ccaacggcgc cagcatcgcg
     4681 tcagagatag gcagtagcgt caacgccgac accagtagcg cggcgggcgt ggcaacaaat
     4741 gtgatccaag gaatggccca ggcattggct aacaaaccgc taatcgagac ttgttgaaac
     4801 aaatagatcg tgacaggcgt gactgccaag gtcatgaccc attgcaactt cgcacccaac
     4861 acgcaagcgg tcttgatcgc ctgccaacgc gacagctcat cgggtgattg cgccagcacc
     4921 tgatcggcaa gcacgatcaa gatcaccatg gccccaaacg acaaccagaa accggttgat
     4981 agcaccgccc aaggatccag cacggtcatg aaccaagccg ctgccaacac cgcctgcgta
     5041 ccgcttagcg gcacacggcc acttagacct acagcagcgg cagccaacat gaaaaaagtt
     5101 ctttgagctg gtacccccca gcctgctagc aaacaataca gaaacgcaaa aatgcctgcg
     5161 gcccagacaa acaccaagcg caccggcacg cgctcggaaa gtcgcctgcc acgccagcgc
     5221 aaacgtcgat aaaccgctgc caaggcactc gctcctagcg cggcaattaa cgtcacatgc
     5281 gatccgctga tagacactaa atgcgtgatc ccggtgaggt taaatacctc ccagtcctcg
     5341 cgtgagacac cttgctgatc gccaatggcc aatgccacca tgacattgat ctctttttca
     5401 tcggccaaga caccttgcaa tcgagcacgg atgtgcgcgc gcacttgctc gatccagata
     5461 ccgggctgcc acccggtggc gtcgggcaga cgtttgggtg taccacgtac cgtggtggtt
     5521 gcccgcaggc cttgttgaaa caaccagctc tctgcatcca tgccggcaaa attcagacgc
     5581 gcgcgtggct gtcgaaaccg cagggccatg cgccagcgct ggccaggggc aacgacgttt
     5641 gcgcaatcac gggtgcaagc acccgcccaa aacaccatca cgcgtcgcgg caaacccgca
     5701 ggcaccggtg cttgcagcac acctgtaaaa cgaaccccgt tgctcacatc tgttggtaaa
     5761 tccgagactt cgacaacaac acgcgtgacc ttgttgtctt caacgcttgc cagtcgatca
     5821 gctagcctta gctctgcctg ccagacaacc cacagcatgc cagcaagaca tgtcgccagc
     5881 gatatggata gtgacatggc aatggcgaca gtcttactgc ctgcacgtgg cgagtatcga
     5941 cacgccatca gaataatcca aatcaccacc gagaccacaa tgccactcac catcatgaca
     6001 tttgtgccgg gtaggcttgg gagctgctgc gccgcacaca ccccgatgag ccaggctgct
     6061 gccactacgt tgatatgcat atcgccgctt cacacaaaac ccgctaggct gacccacagg
     6121 gaccgctttg gcaattcgca aaaaccgagg gttattgttg gccgttggcg cttggcggcg
     6181 agcgaggtat ccaccgaacg ttgcgcgcag cgcgatatac cagccgatgg cggcgcgtta
     6241 aatgtggatt acaccgacca taaaactgcc acaactgtgg tgtaaccgtg gttgcctagt
     6301 tgcaggacta ttgacgtgcc ggcatccaaa gatcccgtag tttcgggatc acacgcatcg
     6361 ctgtttgcgc ggtttgatca agcacggttt gcaccggcag ccctcgcagt atcgccagct
     6421 ctttggcaat ggctgcgacc tgtgccgggc agttgcgtgc gcccttctcg agccaggccg
     6481 gtgccatgtc aggcgaatct gtctcgagca cccagtgctc aagggaaagt tcagtaacca
     6541 gacgtcggat ttgcttggcg cgggtaaagg taaacgcacc gccggcaccc aatgcaaatc
     6601 cgagttcaat gaactgatgg gcttgctgaa agctgccgtt aaacgcatgg gctatgcctc
     6661 caatgtgcgg ttggtgcggt tgcggcaaac gcctgagcca tttaagcaat tcatcctgtg
     6721 attttctgac atgcagaatc accggcaatt ttgcttgttg ggcaatatcg agttgagcct
     6781 tataaaactc aatctggcgt tggcgctcgg tgccatgact gatttcaggc acaaagaaat
     6841 ctagaccgat ttcaccgatg gccactagcc gctcatcatc gcgatgcgtt tgaacaaagt
     6901 tc
//
LOCUS       DATBNL010000034         4018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_129921, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000034 DATBNL010000000
VERSION     DATBNL010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4018
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129921"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /gene="ruvC"
                     /locus_tag="VIC30_00555"
     CDS             complement(<1..365)
                     /gene="ruvC"
                     /locus_tag="VIC30_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEY7802918.1"
                     /translation="MRILGVDPGLRRTGFGVVDSRGSRLSYVASGTIIVPNDVSLPER
                     LKVILDNLREVVRQTQPDVAALEIVFVNTNPQSTLLLGQARGAAMCALADSGLTVHEY
                     TALQVKKSVVGHGKAAKEQV"
     gene            complement(374..1966)
                     /gene="purH"
                     /locus_tag="VIC30_00560"
     CDS             complement(374..1966)
                     /gene="purH"
                     /locus_tag="VIC30_00560"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005019849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEY7802919.1"
                     /translation="MKTQTALISVSDKSGVVPFAQSLHQRGVRLLSTGGTAKLLAEAG
                     LPVTEVATHTGSPEILDGRVKTLHPKIHGGLLARRDLPEHMATLKEHGIDRIDLLVVN
                     LYPFRETVAKPDCSFEDAVENIDIGGPAMLRAAAKNHGNAAGGVAVVIDQSDYSRVLA
                     DMDQHSNQTSFGLRLELAAKVYAHTSAYDGAIAAYLTSLSESEPTPQNTPERETWPRT
                     LTLQLKREQTLRYGENPQQIAAFYRDPSMPAGLLGHYQQLQGKELSYNNIADADAAWD
                     CVRSFEKPACVIVKHANPCGVATGNDTYRAYEKAFRTDPTSAFGGIIAFNRPVDAATA
                     EAVSSQFVEVLIAPGFDGAALAVLNQKKNVRVLEIPMGHGHNDIDVKRVGGGWLIQTP
                     DAELLRDQDLRVVSARHPSEEQMQDLLFAWRVAKFVKSNAIVFAGNGMTLGVGAGQMS
                     RVDSARIASIKAENAGLNLAGSAVASDAFFPFRDGLDVVVDAGATCVIQPGGSMRDEE
                     VINAANERNVVMVLTGMRHFRH"
     gene            complement(2036..2275)
                     /locus_tag="VIC30_00565"
     CDS             complement(2036..2275)
                     /locus_tag="VIC30_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7802920.1"
                     /translation="MKKHITPLDESVRQNLELYLADLGQIEPTHMWDMVMRCVEKPLL
                     ETAMQRASGNQSRAANMLGITRNTLRKKLQAHQLI"
     gene            complement(2288..3298)
                     /gene="dusB"
                     /locus_tag="VIC30_00570"
     CDS             complement(2288..3298)
                     /gene="dusB"
                     /locus_tag="VIC30_00570"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEY7802921.1"
                     /translation="MQIGQWTFPNQVFVAPMAGVTDRPFRQLCKRLGAGHAVSEMAAS
                     NPALWDSVKTARRLDHTGEIDPITVQIAGADPEMMAQAARYNIDKGARIIDINMGCPA
                     KKVCKVAAGSALLQHETLVARILESVEQACAPHGVPVTLKTRTGWDRDNRNALRIAHL
                     AQATGIAALTLHGRTRADRYEGQAEYDTIAEVKAAIDMPVIANGDIDSPQKARAVLDY
                     TGADAVMIGRAAMGRPWIFREIDHFLRTGSILAAPQLIEIRDLLLPHLQDHYAFYGEY
                     TGVRTARKHIGWYMSNVPDGATLVTSINAIDNTAEQARAVAHWFDQALARNTEAAHRL
                     AA"
     gene            complement(3455..>4018)
                     /locus_tag="VIC30_00575"
     CDS             complement(3455..>4018)
                     /locus_tag="VIC30_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009459226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802922.1"
                     /translation="EGGDPAVSETVADNLHDLANMMLELMLQRHDRETLEKVAELLLP
                     RKLPSKEMLKEAAMLARAKKAVLEGSEWLTASELAELAELSSRNPSAQPNKWKKSGKI
                     FAVHHAGIDYFPGYALDPATGYRPIKALAKILETFSGHKDSWGIGIWFASQNSFLGGK
                     RPLDLLISETERVLAAAIDEVQEIAHG"
BASE COUNT          830 a         1078 c         1177 g          933 t
ORIGIN      
        1 acctgttctt tggcggcttt gccgtgaccc acgactgact ttttgacctg caaggcggtg
       61 tattcatgca cggtcaaacc actgtcagct aacgcacaca tggcagcgcc gcgcgcctgc
      121 ccaagtagca aagtggattg agggttggtg ttcacaaaca cgatttccag ggccgcgaca
      181 tcaggctggg tttggcgcac cacttcgcgc agattgtcca aaatgacttt taggcgctcg
      241 ggcagtgaga cgtcgtttgg cacaatgatc gtgccactgg ccacgtaact cagtcggctg
      301 cctcggctgt cgaccacacc gaagccggtg cgccgtaaac ccgggtcaac gccaaggatg
      361 cgcatgcgac tctttagtgc cggaagtggc gcatgcccgt gagcaccatc accacgttgc
      421 gttcgttggc cgcgttgatt acttcttcgt cacgcatgct gccaccgggt tgaatcacgc
      481 aggtggcacc ggcatcaacc accacatcaa gaccatcacg aaacgggaaa aaagcgtctg
      541 aggccactgc gctgccagcg aggttaagac cggcgttctc ggcttttatc gaggcgatac
      601 gcgctgagtc cacccggctc atttggccag cacccacgcc aagggtcatg ccgttgccgg
      661 caaacacgat ggcattggat ttaacgaact tggccacgcg ccaggcaaat agcaggtctt
      721 gcatttgctc ttctgaagga tgccgtgcgc tcaccacccg caaatcttga tcacgtaaca
      781 gttcagcgtc tggggtttgg atgagccagc cgccgcccac gcgtttgacg tcgatgtcgt
      841 tgtggccgtg gcccatgggg atttctagta cacgcacatt ttttttctgg tttagaacag
      901 ccagtgccgc accatcaaac ccgggtgcga tcaacacctc aacaaattga ctcgagaccg
      961 cttcagcggt ggctgcatcg acaggccgat taaaggcgat gatgccgcca aaggctgagg
     1021 tcggatcggt gcgaaaggct ttttcatagg cgcggtaagt gtcattgccc gtggccacgc
     1081 cacacgggtt ggcgtgctta acaatcacgc aagccggttt ctcaaaactt ctgacacaat
     1141 cccaagccgc atcagcatcg gcaatgttgt tgtatgagag ttccttgccc tggagctgtt
     1201 ggtagtgacc caacaaacca gcaggcatgc ttgggtcacg atagaacgcc gcgatctgct
     1261 gggggttttc tccataacgc agggtctgct cgcgcttgag ttgcagggtc agcgtgcgtg
     1321 gccaagtctc gcgttcaggg gtgttttggg gggttggctc tgattcgctc aggctcgtaa
     1381 ggtaagcagc aatggcgccg tcgtaggcgc tggtgtgggc atagaccttg gcagccaatt
     1441 caaggcgcag accaaagctt gtctggttgc tgtgctggtc catgtcggca agcacgcgcg
     1501 agtagtctga ctgatcgatc accacggcca cgccgcccgc cgcattgcca tgattcttgg
     1561 ctgcggcgcg cagcatcgcc ggcccaccga tgtcgatgtt ctcaacagcg tcttcaaacg
     1621 agcagtctgg tttagccacg gtttcacgga aagggtagag gttcaccacg agcagatcga
     1681 tacgatcaat gccgtgctcc ttaagcgttg ccatgtgttc aggcaagtca cgtctggcta
     1741 acaggccccc atggatcttg ggatgcaggg tcttgacgcg gccatcgagg atttccggtg
     1801 aaccggtgtg ggtggctact tcagtcacgg gtaagcctgc ttcagcgagg agcttggccg
     1861 taccgccggt tgatagcagg cgcacgccgc gctgatgaag cgactgggca aatggcacca
     1921 cgccggactt gtcagacaca gaaatcaggg cagtttgagt tttcatgagg aggcgtcagt
     1981 agggatggag taagtcgtaa gtcacactac acgaatcgaa tgatcagtgc gcgtgttaaa
     2041 tcagttgatg ggcttggagc tttttacgta gtgtgttgcg tgtgatgccc agcatgttgg
     2101 ctgcgcgcga ttgattgccg ctagcgcgct gcatggcggt ttcaagcagg ggcttttcca
     2161 cacaacgcat gaccatgtcc cacatgtggg ttggttcaat ctgtcccaaa tcggcgagat
     2221 agagttcgag gttctgtcgc acggattcat ccaggggggt gatgtgtttt ttcatatgtc
     2281 gtcctgttca ggcagcgagt cgatgcgctg cctcggtgtt gcgtgctaat gcttggtcaa
     2341 accagtgagc aacggcgcga gcctgctcgg cggtgttgtc gatggcgtta atgcttgtca
     2401 cgagtgttgc gccatcaggc acattgctca tgtaccaacc gatatgttta cgagccgttc
     2461 gaacaccagt gtactcgccg taaaaggcat agtggtcttg caaatggggc aacaaaagat
     2521 ctcgtatttc aatgagctgc ggtgcggcaa ggatagagcc ggtgcgcaag aagtgatcaa
     2581 tctcacgaaa tatccagggg cgacccatgg ccgcgcgccc gatcatcacc gcatcggccc
     2641 cagtgtagtc gagtaccgca cgggcttttt gaggactatc aatgtcacca ttggcaatga
     2701 ctggcatgtc gatggcggct ttgacctcgg caatggtgtc gtattcagcc tggccttcgt
     2761 agcgatcggc acgggtgcgt ccgtgcaggg tgagcgcggc aatgccagtg gcttgagcca
     2821 agtgtgcgat acgcagggca ttgcggttgt cacgatccca gcccgtgcgg gttttaagtg
     2881 tcacgggcac accgtgtggc gcacaggctt gctccacaga ctcaaggatg cgtgccacta
     2941 gcgtctcgtg ctgtaaaagt gcagagccgg ctgcgacctt acagactttc ttggcagggc
     3001 agcccatgtt gatgtcaatg atgcgcgcgc ccttgtcgat gttgtagcgt gcggcttggg
     3061 ccatcatctc agggtcggcg ccagcgatct gaacggtgat tgggtcaatt tcgccagtat
     3121 ggtcaaggcg tcgggcagtt tttacgctat cccaaagcgc tgggttacta gcagccatct
     3181 cggagacagc gtggccggcg cctaagcgtt tgcaaagctg acggaaaggc cgatcggtca
     3241 cccccgccat gggggcgacg aacacttgat tgggaaatgt ccattggccg atctgcatgc
     3301 ttgcattgta tcggaggtca gtggtggttt cggtggctgc aaggcataga tagcgatgct
     3361 gtcacattaa ggcgtgttga cgacagcgca cacaactaca gcgaacacga ttgcacatgc
     3421 tcaggcatcc actgactgaa ctggcgcaac atgtctagcc atgcgcaatc tcctgaacct
     3481 catcaatggc tgcagcgagt acgcgttcag tttccgaaat cagcagatct agcggccgct
     3541 tgcctcctaa aaagctgttt tgagaagcaa accaaatgcc aatgccccaa ctgtccttgt
     3601 gaccagagaa cgtctcgagg atttttgcta atgccttgat aggtcgataa ccggtggcgg
     3661 gatcaagcgc atagcctgga aagtagtcaa taccggcatg gtgtacggca aaaatttttc
     3721 cggacttttt ccatttgttc ggttgagcgc ttggattgcg tgagcttagt tctgctagct
     3781 cagcaagttc gctggcagtc aaccattcac tgccttcgag aactgccttt ttagcccttg
     3841 cgagcatggc agcctctttg agcatttctt tgctcggtag tttccgtggt agcagcaatt
     3901 ccgcgacttt ttcaagcgtc tcgcggtcgt gcctttgcag catcaattcc agcatcatat
     3961 tggccaagtc gtgtaggttg tcggcgaccg tttcggacac ggctggatcg ccgccctc
//
LOCUS       DATBNL010000035         3802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_109986, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000035 DATBNL010000000
VERSION     DATBNL010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109986"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2404
                     /locus_tag="VIC30_00580"
     CDS             <1..2404
                     /locus_tag="VIC30_00580"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY7802923.1"
                     /translation="GLYQQVSDSLRADVRLLFGGDVEIESRDPLPQEILRWVQSRSTV
                     SEMIDLRTMLVTDVGRSQLIELLSVDRAYPLYGDLVLEPHGDIQAVIAQQDGQWGAAI
                     DSALASRLNLAVGDTVSVGQLQLAVRAVVVNQPDRSLRADWGAAPVLIAKGALEDSGL
                     LQPFSRVQYQYRVRLQGGQSSDAIAFRDDLLTAFPNMQAEVRSFDERSDRMTEVLQQV
                     GSGLLLVGFSALFIGGLGVFNSIKAHLESKLSSLATLRAIGLRDRRLALFVLLQVLLL
                     AALASTVGVVAGGLMALVGASVVADQLPTQVLLVSLWQPALVAWVFGVLTAVTFALPA
                     IGRALSVSPAALFRGLEAESLTVSRTVKWITGLIGVSSLLLLVLVLPDPRFALAFVVA
                     VTGVLLVLGLVIRLIMGLARRTQSWTAVPLSMQLALAGVQQSHSPIRMALICLGSALT
                     LLVACTLVVMSLLRMVNETVPAQAPAMVLYDIQPNQTTVVQDALTAVAPEAKVQTAPF
                     VLGRLIGVNDEQLADSGDLDRMRESRDEHKFSDRRGNFDDVLIDKGAWWSDDYQGPPV
                     VAMEDREANELGLAVGDRLTFEILGQALQAELVAIYSQPRMQARLWLEAIFNDAALEP
                     FITRYVGAAWMPAEQALTAQDQLASVAPNIATARTESILKASRDLLGRASAGLVVIAL
                     VCLGASLLVLASVVAASRTRQLYDATVMHALGARHRLLTEVLLWEYLLIALVTATFAL
                     VFGSLLANLLLSWRLGIDPAGLYWSGAVTAFGVSLISLGLGARYLLSQMRLNPAMLLR
                     GV"
     gene            complement(2458..3105)
                     /locus_tag="VIC30_00585"
     CDS             complement(2458..3105)
                     /locus_tag="VIC30_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802924.1"
                     /translation="MKPRLSLPTQLQTATLLSLVALGLAGCTTTSYVPPSTTQASPQS
                     FVQQTTVSTSRVVPVAMDQAWKNLQAYSAERYETLTQNRSAGTMKLFVDAYEPSQWIN
                     CGMVQTQGGTFDTDTSLLSLLAKQNAINLDMTVNVSLSPKSASETTVKVNVQYDLAMN
                     YQTNPTTGALIGGQRYQFDSNGSASISITDPDFSGQCRPTGVAEANLLQAAARAR"
     gene            complement(3199..3474)
                     /locus_tag="VIC30_00590"
     CDS             complement(3199..3474)
                     /locus_tag="VIC30_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012428877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY7802925.1"
                     /translation="MNADTFHKTVTAEGFSEPVLIEREADGFMDVHTHPFEAKALIVQ
                     GQIEIGLDDQSQTYRAGDVFHLTALQPHWERYGEQGVVYLSARRQDD"
BASE COUNT          677 a          933 c         1160 g         1032 t
ORIGIN      
        1 tggtctgtat caacaggtat ccgattcgtt gcgtgctgat gtcaggctct tgtttggcgg
       61 cgatgtcgag attgagtctc gggatccttt gccgcaggag attttgcggt gggttcagtc
      121 gcgctcaacg gtctccgaga tgatcgattt acgcacgatg ttggtcacag acgttgggcg
      181 ttcgcagctc atcgagttgt taagcgtcga ccgtgcttat cccttgtacg gcgatcttgt
      241 gcttgaaccg cacggtgaca tccaagcggt cattgcgcaa caggacggcc agtggggtgc
      301 ggctatcgat agcgcactcg ctagccgttt gaacttggct gtcggtgaca cagtgtccgt
      361 tggtcagttg caacttgcgg tgcgggcggt ggtggttaat cagcccgacc gcagtctgcg
      421 ggctgattgg ggggctgccc cagtcctgat tgccaagggc gcacttgaag actcgggatt
      481 gttgcaaccc tttagccggg tgcagtatca gtaccgtgtc aggctccaag gtggtcagtc
      541 atctgatgcc attgcgtttc gagacgattt gctcacggca ttcccgaaca tgcaagccga
      601 ggtgcgtagt tttgatgagc gcagcgaccg gatgaccgag gtattacagc aagtcggctc
      661 tgggttgctg ttggtggggt tttctgcgtt gtttattggc ggtcttggtg tgtttaacag
      721 tatcaaggcg cacttggaga gcaagctctc aagcttggcg acgttacgtg ccattggttt
      781 gcgtgatagg cgcttggcgc tctttgtcct cttgcaagtg ttgttgttgg ccgcactggc
      841 tagcaccgtt ggcgtggtgg caggtggact catggcattg gttggcgctt ctgtggtggc
      901 cgatcagttg cccacgcaag tgttgttggt gagtttgtgg caaccagcgc tcgttgcttg
      961 ggtgtttgga gtgcttacgg ccgtgacctt tgcgctaccg gccattgggc gagccttgtc
     1021 cgtgtcacct gctgccttgt tccgcggcct tgaggcagag tcgctcacgg tatcgcgaac
     1081 cgtcaaatgg atcactgggt tgattggcgt gtctagtctg ctcttgttgg tgctggtttt
     1141 gcctgacccg cgttttgcct tggcatttgt ggtcgcagtt actggggtgt tgttggtgtt
     1201 ggggttggtg attcggttga tcatgggctt ggctcggcgc acgcagtctt ggactgctgt
     1261 gccactgtca atgcaactgg ccttggcagg tgtgcagcaa tcgcattcgc ccattcgcat
     1321 ggcattgatc tgcctcggtt cagcattgac attgctggtg gcctgtacct tggtggtgat
     1381 gtcgttattg cgcatggtga atgaaaccgt ccctgcgcaa gcaccggcca tggtgctcta
     1441 tgacatccaa cccaatcaga ccactgtggt gcaagatgct ctgacagctg tcgcacctga
     1501 ggccaaggtt caaaccgcgc cattcgtgct gggtcgtttg attggggtaa atgacgagca
     1561 actggccgat agcggcgatc ttgatcgcat gcgtgagtca cgcgatgagc acaagttcag
     1621 cgacagacgt ggcaactttg atgatgtgct catcgacaaa ggtgcgtggt ggtcagatga
     1681 ctatcaaggc ccaccggtgg tggccatgga agatcgcgag gccaatgagt tgggcttggc
     1741 agtcggtgat cgtttaacct tcgagattct gggtcaggcg ctgcaggccg agctcgtggc
     1801 aatttactca cagcctcgca tgcaggccag attgtggctt gaggcaatat ttaacgatgc
     1861 tgcgcttgag cctttcatta cacgttatgt tggggctgcc tggatgcctg ctgagcaggc
     1921 gctcacggcc caagaccaat tggcctcggt ggcgccgaac attgcaaccg cgcgcaccga
     1981 gtcaatcttg aaagcctccc gcgacctgct ggggcgtgcc agcgctggtt tggttgtcat
     2041 tgctttggtc tgccttggcg cgagcctcct agtcctggcc agtgtggtgg ccgctagccg
     2101 aactcgtcaa ctctacgatg caacggttat gcatgcgctc ggggcgcgcc atcgcttgtt
     2161 gaccgaagtg ctgctttggg aatatctgct tattgcgctg gtgacggcaa cgtttgcctt
     2221 ggtgttcggc agtttgctgg ccaacttgct attgagctgg cgtctaggca ttgatccggc
     2281 tggtctttat tggagtggtg ctgtgaccgc cttcggtgtg agcctgatca gtttggggct
     2341 tggtgcgcgc tatctgttgt cacagatgcg cttgaacccc gcgatgctgc tgcgcggggt
     2401 gtgacaccta gactcaagat cagccccaca ctagccccac accagcccaa taccggccta
     2461 gcgcgctcgc gctgcagcct gcaaaagatt agcttcagcc acaccggttg ggcggcactg
     2521 gccactaaag tctgggtcgg tgatcgatat gctggctgat ccattcgaat caaactgata
     2581 acgctgccca ccgatcaagg ccccggtggt cgggttggtt tggtagttca tggctaggtc
     2641 gtattgcaca ttgaccttaa ccgtggtttc tgaggccgat ttaggcgaca gcgacacatt
     2701 gaccgtcatg tcaaggttga tcgcgttttg tttggctaag aggcttagca acgaggtgtc
     2761 agtgtcgaac gtgccgcctt gggtttgcac catgccgcaa ttaatccatt gacttggttc
     2821 gtaggcatcg acaaacaact tcatggtccc ggccgagcgg ttttgtgtga gggtttcata
     2881 gcgttcggcg ctgtaggctt gcagattctt ccaggcttgg tccatcgcaa ccggcaccac
     2941 acggcttgtc gacacagtcg tttgttgcac aaaagactgt gggctcgctt gagtcgttga
     3001 tggcggcacg tagcttgtgg tggtgcagcc agcaaggccg agggcaacca gacttaacag
     3061 ggttgcggtt tgtagttggg taggcaaact gagtcttggt ttcacgaaag cgttcctgtt
     3121 catgtgctgg ccagttggca gcctgtatgg tgaaagttga ttgttaagac tgcgtggtga
     3181 catacagctt agtggcaatc agtcatcttg cctgcgtgcc gataggtaca ccacaccttg
     3241 ctcgccatag cgttcccaat gcggttgcaa tgcggtcaga tgaaacacat cgcctgcgcg
     3301 ataagtttga ctttgatcgt ctagaccgat ttcgatctgc ccttgcacga tgagtgcttt
     3361 tgcttcaaac ggatgggtgt gcacatccat gaagccatcg gcctcgcgct caatgagcac
     3421 gggttcgcta aaaccttcgg cagtcaccgt tttgtgaaac gtatcagcat tcatctggcc
     3481 agcctcgggg gttattgggt taggtggttt ggtggtttgg tgtgttcatt gggtgggttg
     3541 tgcctttgcc tgagtttaag ggatgtcgct tccattggaa tacttttttg ctatctcacg
     3601 tcatgagata ccgctggggt gatgatgcgt gtttggttgt caccagatcg tggttgcaaa
     3661 aaaatcttat gaattaaggc gtttaggtga ctctgacccc gcacaccact gaactttcct
     3721 ttaacctaag cccaagttag ttactgttga tcgcaagtct tttgtcacga atcggttcgc
     3781 ttagaaaaag cttcgtctag gc
//
LOCUS       DATBNL010000036         1994 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10486, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000036 DATBNL010000000
VERSION     DATBNL010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10486"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..1480)
                     /gene="pstA"
                     /locus_tag="VIC30_00595"
     CDS             complement(194..1480)
                     /gene="pstA"
                     /locus_tag="VIC30_00595"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEY7802926.1"
                     /translation="MNTSSSPIKPDWRKIMSGRHYARRQRGDLVLKLIGLSALTVAIG
                     VLVILIASLIQTGHYAFTQSHLNLKVDISTEFVSKEDPFKGRYRNIINDALAKEFPDV
                     TNRAELRKLNGIPTPAAQYLLRDYVVSNPDLIGKTIDFSVPLSDPYDQLNKRLINPDT
                     PEEFRRLKNDQVGWFDSLKERGLVSTHFNWGLFTNADSRFPEMAGLAGALSGSFWALL
                     VCFLISFPMGIGAAIYLEMFAPKNRVTDLIEININNLAAVPSVVFGLLALAVFLNWFG
                     MPRSAPLVGGLTLALMTLPTIIIATRAALKAVPPSITEAALGVGASKHQAVFHHVLPV
                     ALPGILTGTIIGLAQALGETAPLLLIGMNAFLTAVPDGPLAASTALPTQIFIWADSPE
                     RGFVSRTSAAILVLLGFLITMNMLAVYLRSKFEKSV"
     gene            complement(1493..>1994)
                     /locus_tag="VIC30_00600"
     CDS             complement(1493..>1994)
                     /locus_tag="VIC30_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019837665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY7802927.1"
                     /translation="FLRSTAASIGIDAAPNMALAAGSVMGIMLIPFISSFTDDSLNAV
                     PRGLRDGSFALGATQSETVLKVLFPAAIPGIVGGVLLAISRAIGETMIVVMAAGLIAM
                     MTVNPLDSVTTITVQIVTMLIGDTEFDNPKTLSAFALGLMLFVVTLMLNVLALRIVRK
                     YREMYD"
BASE COUNT          520 a          496 c          538 g          440 t
ORIGIN      
        1 gcaatcgcac gtttgtcagc gtaaaacacg ttgactttgt cggcacgtac tcttggtttg
       61 tccagtaccg aattgccaac cgtttcaaac gattcgcttg cgtagtcagt tgtgatgggg
      121 ctgtccatga cgccagtaac catatcaatt cctttttgcg cttctctagt taaatgcgat
      181 cttacttatt gcattacaca gatttctcga acttgctgcg caggtatacc gccagcatgt
      241 tcatggtgat caaaaaccct aacagcacca aaattgccgc acttgtacgt gatacgaacc
      301 cacgctctgg actgtcggcc cagataaaga tctgtgtcgg caaagccgtt gacgcggcca
      361 gtggcccgtc aggaacggct gttaagaacg cgttcatacc gatgagcagc agtggggcag
      421 tttcacccaa ggcttgtgcc aaaccgataa tggtaccggt cagaatgcca ggtaaggcaa
      481 cgggcaagac gtgatgaaat accgcttgat gcttggacgc gccaacgcca agcgctgcct
      541 ctgtaatcga tggtggcacg gctttcaggg cggcgcgtgt ggcaataatg atggtgggta
      601 gcgtcatgag cgctagtgtc aaaccaccga ccagaggtgc tgagcgcggc atgccaaacc
      661 agttcagaaa taccgctagt gcgagcagac caaacaccac agacggcaca gcagcgaggt
      721 tgttgatgtt gatttcaatt agatcagtaa cccgattctt gggtgcaaac atctcaaggt
      781 aaatggctgc accaataccc atggggaagc taatcaagaa acaaaccagc aatgcccaga
      841 aagacccaga caatgcacca gccagacccg ccatttcagg gaagcgcgag tcagcattgg
      901 taaacaaacc ccagttaaag tgggtggaga caaggccacg ttccttcaac gagtcaaacc
      961 agccgacttg atcgttcttt aagcgtcgga attcctcagg ggtgtctgga ttgattaatc
     1021 gcttattcag ctgatcgtag gggtcggaca acggaaccga aaagtcaata gtcttgccga
     1081 taagatcggg gttgctaact acatagtcgc gcagcaggta ttgggctgca ggcgttggga
     1141 tgccattgag cttgcgaagc tcagcacggt tagtgacgtc agggaattct ttggcaagtg
     1201 cgtcgttaat gatgttgcgg taacgcccct taaaagggtc ttctttagag acaaattcgg
     1261 tgctgatgtc gactttgaga ttgagatgcg actgtgtgaa tgcgtagtgc ccagtttgga
     1321 tcagactggc aatcaaaatc accaagacac caatggcaac ggttagagca cttaaaccaa
     1381 tgagcttgag cactaagtcg cctctttggc gccgggcata gtggcgcccg gacatgatct
     1441 tgcgccagtc tggtttgatg ggggagcttg aggtattcat cgacaactct ctttagtcat
     1501 acatttcgcg gtacttgcgc acaatgcgca gggcaagtac gttgagcatc aaggtgacaa
     1561 caaacagcat cagaccaagg gcgaatgctg acagggtttt agggttgtca aattcggtat
     1621 cgccaatcag catggtcaca atctgcaccg taatggttgt gacagagtcc agcgggttga
     1681 ccgtcatcat ggcaatcaga cctgcggcca tcaccacaat catggtttcc ccaatggcgc
     1741 ggctaatggc caacagcaca ccgcccacaa tgccgggaat cgccgcggga aacaacactt
     1801 taagcacggt ctcggattgc gtggcaccaa gtgcaaatga gccatcacgc aaacctctgg
     1861 gcaccgcatt gagtgagtca tctgtaaacg atgagatgaa agggatcagc atgatgccca
     1921 tcacggaacc ggcagccagt gccatgttgg gggcggcgtc aataccgatg ctcgcggctg
     1981 tgctgcgcaa aaag
//
LOCUS       DATBNL010000037         2347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_169710, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000037 DATBNL010000000
VERSION     DATBNL010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169710"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /gene="mltG"
                     /locus_tag="VIC30_00605"
     CDS             complement(<1..861)
                     /gene="mltG"
                     /locus_tag="VIC30_00605"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEY7802928.1"
                     /translation="MRWLFKTLLWLIVLGVITAAAVGGLAYYWVNKPLVLQSPEIDVR
                     IPSGAGPMRIGQLLVDQGVEMPAPAFGWLARLTGQDRSIQAGGYQIRQGDTLVDVLRR
                     MAQGEVTQRRVAFIEGWTVDQITAELARHPDVNQTLEAELLSNHAELASRLGVDKQRL
                     EGLLFPDTYVFSVGTSDEEILLRALRTQDKVLEDAWRNRAPDLPLKNPYEALILASII
                     EKETGRADERRRVAGVFINRLRVGMPLQTDPTVIYGMGDRYQGRIRKADLRRDTPWNT
                     YTRPGLPPTPI"
     gene            1124..2119
                     /locus_tag="VIC30_00610"
     CDS             1124..2119
                     /locus_tag="VIC30_00610"
                     /inference="COORDINATES: protein motif:HMM:TIGR03317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEY7802929.1"
                     /translation="MSRFTQPVQCFACTHLSVFSAAGPDTETFLQSQLAQDMQTVTTS
                     QAALAGFCTAQGRLWASMLLLGTQQGAVGGVSGVVGVACADVMDSFLKRLRMFVLRSK
                     VTLEAPEQPKVFGLVVSRADLPALNALCDSELSDKPWQVIATPWGQFISMPSADADVV
                     RYQLLASDDEIAALSKTLGESWQPNHEVATWRLQDMRAGIGWIQTATQDLFIAQTLNL
                     DLLDGVSFTKGCYPGQEVVARAHYRGTVKRRMHLANIGSTYPDLTPGMDVFEANEPDN
                     PVGRLIDVVTSAGNTWVLFEAPFKTLKGEPLRAGSASGPSLQLQSLPYSLEQPTT"
     gene            complement(2174..>2347)
                     /locus_tag="VIC30_00615"
     CDS             complement(2174..>2347)
                     /locus_tag="VIC30_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014004542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003860 - 3-hydroxyisobutyryl-CoA
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY7802930.1"
                     /translation="ECAASGTFQEGIRAVLIDKDRNPQWQPATLAETSGDWSQPYFSI
                     SIDDPDHPLRHLD"
BASE COUNT          518 a          644 c          641 g          544 t
ORIGIN      
        1 aatcggggtg ggtggcaagc cagggcgggt gtatgtgttc caaggtgtgt cgcgtctaag
       61 gtcagcctta cgtatacgcc cttggtagcg atcgcccatg ccgtaaatca cagtagggtc
      121 tgtctgcaac ggcatgccca ctcgcagccg attgataaag acgccggcca cccggcgtcg
      181 ctcatcagcg cgcccggttt ctttttctat aatagaagcc agtatcagcg cctcgtaggg
      241 gtttttaaga ggcaaatccg gggcccggtt gcgccaagca tcttctagga ctttgtcctg
      301 cgttcgcagc gcacgcaaca gaatctcttc atcactggtg cccaccgaga aaacgtaagt
      361 atcaggaaac aagagcccct caaggcgttg cttgtcaaca cctaggcggc ttgccaactc
      421 tgcgtgattg gagagcaact cggcttcgag ggtttgattc acgtccggat gcctggccag
      481 ttcggctgtg atttgatcaa cagtccagcc ttcgataaag gccacacgcc gttgcgtaac
      541 ctcaccttga gccatgcgtc gcaaaacgtc cactagcgtg tcgccctggc gaatttgata
      601 gccgccggct tgtatcgaac gatcctgccc ggtgagtctg gccagccaac caaatgccgg
      661 tgctggcatt tctacgcctt gatctaccag caactgtcca atacgcatag ggcctgcgcc
      721 actcggaata cgaacatcga tctccgggct ttgcagcacc agtggtttgt tgacccaata
      781 gtaggccaag ccaccgacgg ccgcggccgt gatgacgcca agtactatca gccaaaggag
      841 ggttttaaat agccatcgca tcgcagtgaa gtgtaaatga aatcgtctgc gtcagtggtc
      901 acagtcacca ccgtggtcag cacttcgaac cttgctatcg cggcaagcac gccaatgcct
      961 gcactgccaa caaggcgctc agtgagccgg gtcacagccc ttgctatcat caacatatag
     1021 aaattcgtgg atccttggat ctagtatttg agtcaatcga gtatgtgttg gttaggccac
     1081 gctgctaacc cattatttta ttccgtcctt aggaatcatt gccatgtcac gctttacaca
     1141 acctgttcaa tgtttcgcat gtacgcatct gagcgtgttt tctgctgcgg gccccgatac
     1201 tgagacgttc ttgcagtcgc agttagccca agacatgcaa acagtcacaa caagccaagc
     1261 agcacttgct ggcttttgta ccgctcaagg tcgcctgtgg gcctctatgc tcctgttagg
     1321 tacccagcaa ggcgctgtcg gcggtgtcag cggtgtggtt ggggtggcct gcgcagacgt
     1381 catggacagc tttttaaagc gcctgcggat gtttgtactt agaagcaagg tcacgttgga
     1441 agcacccgag cagccgaaag tattcggatt agttgtatct agggcagacc taccggccct
     1501 aaatgccttg tgcgacagtg agctttcgga caagccctgg caagtgattg caacgccttg
     1561 ggggcaattt atcagcatgc ctagcgccga tgcagatgtt gtgaggtacc agttgttggc
     1621 cagtgacgac gaaatcgccg ccttgagtaa aacgctcggt gaaagctggc aaccaaacca
     1681 tgaagtagcc acttggcggc ttcaagacat gcgagcaggc attggctgga ttcaaacggc
     1741 cactcaggac ttatttatcg cccagacact gaacctcgat ttgcttgatg gcgtgagctt
     1801 caccaagggc tgctatccgg ggcaagaggt ggtagctcgt gcgcactatc gtggcacggt
     1861 taagcgccgc atgcacttgg ctaatatcgg ctcaacctac ccggatctga cgcctggcat
     1921 ggatgtattt gaggctaatg agccggacaa tccagttggt cgactcatcg acgtggtgac
     1981 ttcggctggc aacacctggg tgctgtttga agcgcccttt aaaaccttaa aaggcgaacc
     2041 cctgcgtgcc ggcagtgcca gtgggccatc gctgcagctg cagtcactgc cctactcgct
     2101 tgagcaaccc acaacttaag tgcttggatt ggctgcagtg gttagcttga ctggctccgc
     2161 ccgattggct gagctagtca agatgacgta gcggatgatc aggatcatcg atcgaaatcg
     2221 agaaatacgg ctgcgaccag tcacctgagg tttcagctaa cgtggcgggc tgccattggg
     2281 ggttgcggtc tttgtcaatc agcaccgcac gaatcccttc ctgaaacgtt ccgctagccg
     2341 cacattc
//
LOCUS       DATBNL010000038         2254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_139954, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000038 DATBNL010000000
VERSION     DATBNL010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139954"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VIC30_00620"
     CDS             <1..271
                     /locus_tag="VIC30_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012761983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7802931.1"
                     /translation="VVVPYVMSLVKDGLNAENGKKVLDFVMSDQGQAIWANAFLRPVR
                     ASAMSPEAQAKFLPESEYARATTVDYGKMAQVQKAFANSYLSEVR"
     gene            279..1088
                     /locus_tag="VIC30_00625"
     CDS             279..1088
                     /locus_tag="VIC30_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012746413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY7802932.1"
                     /translation="MSRPILFWCLLPVGIFFVAFWLLPVTQLLVLPAQQDWTLYFAVL
                     TQWRYFESLMNTLFLSVSVTALTLVLGAAVGLYLARHRFVGKRLLLAILTLPLSFPGV
                     IVGFFMILLAGRQGLIADITEFIGLGRVTFAYGFLGLFLAYLYFSLPRAIAAYEAAAQ
                     AMDPELEQAARTLGANRWHIVRDVWVPQLAPTTAACAAIVFATAVGAFGTAFTLSSKF
                     EVLPITIYSEFTNFANFALAASLSIAMGLCTWFVLFLARRRGASTLPGVVR"
     gene            1085..1888
                     /locus_tag="VIC30_00630"
     CDS             1085..1888
                     /locus_tag="VIC30_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007838457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY7802933.1"
                     /translation="MSQQTGMLRSPWLALMTALVAVFMMVPMVLSTLAALVENYSQGL
                     QSGLTLRWLQQVLDQYGSTVAWSLGLAVACVLGNIVIGVPAAYALANSRSKWARSFEE
                     ILTLPVAVPGLATGLALILAYGTLRDFRQSYAFILVGHMVFTMPFMVRTVAAAFQRPD
                     LHAIDEAAKTLGAGFFQRFVGVLVPSVLPAIAAGSLMVFTLSIGEFNLTWMLHTPLTR
                     TLPVGLADSYASMRLEVGSAYTLVFFLVVLPILWILQWSANVIEQRYRR"
     gene            1860..>2254
                     /locus_tag="VIC30_00635"
     CDS             1860..>2254
                     /locus_tag="VIC30_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009455598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7802934.1"
                     /translation="MSLSSDTVGKPVAVTIKQCAKTFADGTKGLMPCSLEIGAGEVVA
                     LLGPSGCGKTTLLRIVAGLEQADAGGRVWFGGQEVTRLQAEQRQIGMVFQHYALFPHM
                     SVAANIGYGLRVRGVDKVKRDKAVGELID"
BASE COUNT          418 a          561 c          659 g          616 t
ORIGIN      
        1 agtggtggtg ccctatgtta tgagcttggt caaagacgga ctaaatgccg agaacggcaa
       61 gaaagtgttg gacttcgtga tgtctgatca aggccaggca atctgggcca atgccttctt
      121 acgtcctgtg cgtgcctcag ccatgtcgcc tgaggcgcaa gccaagttcc tgcctgaatc
      181 cgagtacgcg cgcgcgacca cggtcgatta tggaaagatg gctcaagtac aaaaagcgtt
      241 tgccaacagt tatttaagtg aagtgaggta agcgcttaat gtcccgtcca atcctgttct
      301 ggtgtctttt gccagtcggt attttttttg tggcgttctg gcttttgcca gttacccagt
      361 tgttggtgct accggcccaa caggattgga cactttactt tgctgtgctc acgcaatggc
      421 gttacttcga aagcctgatg aacaccttgt tcttatcggt tagtgtgaca gcgttaacgt
      481 tggtcttggg cgcagccgtg ggtctttacc tggcgcgtca ccgatttgta ggcaagcgct
      541 tgctattagc catattgaca ttgccactgt cctttcctgg cgtcattgtc ggttttttca
      601 tgatcctgct agctggcaga caaggcttga tagccgacat tacggaattt atagggctcg
      661 gccgagtgac ctttgcctat ggctttctgg ggctgtttct ggcttacctt tacttctcat
      721 tgccaagagc catcgccgcc tacgaggctg cggcacaggc gatggacccc gagcttgagc
      781 aagccgcacg cacgctaggg gcaaaccgct ggcacattgt gcgcgatgtg tgggtacccc
      841 aattagcacc gaccaccgca gcctgcgcgg ccatcgtgtt tgccacggcg gtgggggcgt
      901 ttggcacagc ctttacccta tcaagcaagt tcgaggttct gccgattacg atttattccg
      961 agttcaccaa tttcgctaat tttgcgctgg cggcttctct gtcgattgcg atggggttgt
     1021 gtacctggtt cgtgctcttt ctggctcgcc gccgtggggc aagtacgttg cccggagtcg
     1081 tgcgatgagc caacaaacgg gtatgctgag gtccccttgg ctggcgctga tgactgcctt
     1141 ggttgctgtt ttcatgatgg tacccatggt gttgtcgaca ctggccgcac ttgtagaaaa
     1201 ctacagtcag ggattgcaaa gcggtttgac tttgcgctgg ctgcaacagg tgcttgatca
     1261 gtacggcagc actgtggcct ggtcactggg gctggcggtg gcctgtgtcc ttggcaatat
     1321 cgtaatcggt gtgcccgcag cctatgcgtt ggcaaatagc cgctcgaagt gggcgcgctc
     1381 gtttgaggag atactgaccc ttccggtggc ggtgcctggt ctggcaacgg gtttggcact
     1441 gatcctagcc tacgggacgt tgcgcgattt tcgtcaaagc tatgccttta tcctagtggg
     1501 ccatatggtg ttcacaatgc cgttcatggt gcgcaccgtt gctgcggcgt tccagcgtcc
     1561 cgatctacac gccatagatg aggccgccaa aacacttggc gctggctttt ttcaacgctt
     1621 cgttggggtt ttggtaccgt ctgttttacc ggctatcgcc gctggcagtt tgatggtatt
     1681 cacgctatcc atcggtgagt tcaatttgac gtggatgctg catacgcctt tgacccgaac
     1741 gctgccagtt ggattggctg acagttatgc atcgatgcgc ctagaagtcg ggtcggccta
     1801 tacgctggtt tttttcctag ttgtactacc cattctatgg atcttgcagt ggagtgccaa
     1861 tgtcattgag cagcgatacc gtcggtaaac cggttgcggt caccatcaag caatgcgcta
     1921 agacctttgc tgacggcacc aaaggtctca tgccttgctc actcgagatt ggcgccggtg
     1981 aggttgttgc tttgcttgga ccctcgggat gcggtaagac aacattgctg cgtatcgtgg
     2041 ctggtcttga gcaagccgat gctggagggc gagtttggtt tggaggacag gaagtgacgc
     2101 gtttgcaagc ggagcagcgg cagattggca tggtgtttca acactatgcg ctctttcctc
     2161 acatgtctgt ggcagccaac atcggttatg gcctgcgggt caggggtgtc gataaagtta
     2221 aacgagacaa agcagttggt gagttgattg atta
//
LOCUS       DATBNL010000039         2196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_50413, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000039 DATBNL010000000
VERSION     DATBNL010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50413"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1798
                     /locus_tag="VIC30_00640"
     CDS             <1..1798
                     /locus_tag="VIC30_00640"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HEY7802935.1"
                     /translation="TIPLMRKVGFTAEKAGAVEVASSVNGQIMPPVMGAAAFLMVEFV
                     GISYLEVIKHAFIPAVISYIALVYIVHLEALKQDMPALGPAKSLTSMLLKALLGFAVT
                     GVLFTGAVYGIRGLQAVAPSVADPMVLLMVAGIYLAMLKIAAKRDDLSVEQTLKGDVK
                     LPTMGEVFPTGLHYLLPIVVLVWFLMVERQSPAKSAFYAVSVMLVIILTQKPLKAWFR
                     SQSLGPAARLGFDDFVQGMIAGARNMIGIGVATAAAGIIVATVTRTPIGTELADLVDT
                     LAAGHLMLMLLLIGVFSLVLGMGLPTTANYIVVSSLMASVVVTLGAQEGLIVPLIAAH
                     LFVFYFGIMADVTPPVGLASFAAAAVSGGDPIRTGFTAFFYSLRTVALPFLFIYEPTL
                     ILYGIDLGTWAGVGQAVWIFCIATFAMLLFAAATQGYFLAPSRLWESAALLLVAFTLF
                     VPRFWLDQVQDPFETKPPVTLAQVADDLEAGDRVRFVVRGPSFTTGDPVDLTVSHVVT
                     EQDPESNRLQEQGMMFLPEGERLFLDEPMFNTPYQERLSGFDFYLDDRVEVVSVLSPA
                     QRLPKQVFYIPAIGLLLLIIVLQRRRQTKPAF"
     gene            1817..>2196
                     /locus_tag="VIC30_00645"
     CDS             1817..>2196
                     /locus_tag="VIC30_00645"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7802936.1"
                     /translation="MYKNILLPVDLSDEVSSSKALAAALDLTTSETTLHVVSVLPSFG
                     SAQVAGYFSADFEKQALKHLGDELCAWVQAKVPSDIKVKPHVLHGTIYHEVLTAADKL
                     AADLIVIGAHRPELKDYFLGPNAAR"
BASE COUNT          435 a          575 c          614 g          572 t
ORIGIN      
        1 taccattcca ctcatgcgca aagtgggttt taccgctgag aaggccggtg ctgttgaagt
       61 cgcaagctcg gtgaacgggc agatcatgcc cccggtgatg ggtgcggcag ctttcttgat
      121 ggtggagttt gtcgggattt cttatcttga ggtgattaag cacgccttca tcccagcggt
      181 tatttcctac atcgccttgg tctatatcgt gcaccttgag gcgctcaaac aggacatgcc
      241 ggcgctgggc cccgctaaaa gtctgaccag catgctgctc aaagcgcttc tcggctttgc
      301 tgtcacgggt gtgcttttta ccggcgctgt ctacggtatc cgcggcttgc aggcggtggc
      361 gccaagcgtg gctgacccaa tggtgctctt gatggtcgca ggcatctatc tagcgatgct
      421 caaaatagct gccaagcgcg atgacttgtc ggtcgagcaa accctcaaag gtgacgtcaa
      481 actacccacc atgggtgagg tgtttcccac aggtctgcac tacctgttgc cgattgtggt
      541 gctggtgtgg ttcttgatgg ttgaaagaca gtcaccagcc aaatcagctt tttacgctgt
      601 gtccgtgatg ctggtgatca tcctcacaca aaagccgctc aaagcctggt ttcgtagcca
      661 gtcactgggc cctgcagcca ggttggggtt cgatgacttt gtgcaaggca tgattgccgg
      721 ggcacgcaac atgattggta ttggcgtggc cacggctgcc gctggcatta ttgttgccac
      781 ggtcacgcgc acgccaattg gcacggaact cgccgatctg gttgatacgc tggccgccgg
      841 tcatttgatg ctcatgctgc tgctcattgg cgtgttctca ctggtgctgg gcatggggtt
      901 gccaacgacg gctaactaca ttgtggtgtc atcgctcatg gcctcggtgg tcgtgaccct
      961 cggtgcgcaa gaaggtctga tcgtgccgct gattgcggcg cacttgttcg tgttttattt
     1021 cgggatcatg gccgatgtca ccccgcccgt gggactagcg agttttgcgg cggccgcggt
     1081 ctcgggtggc gaccctatcc gtaccggctt cacagcattt ttctattcgt tgcgcacggt
     1141 cgccctgccg tttctgttta tctacgaacc gaccctgatt ctgtacggta ttgatctagg
     1201 cacttgggct ggtgtcggtc aggcggtctg gattttctgt atagcgactt ttgccatgct
     1261 cttgtttgcc gctgccacac aaggctactt tctggcgccc tcgcgtctat gggagagtgc
     1321 ggcgctgctg ttggtggcat ttactttatt tgtgcctagg ttttggcttg atcaggtaca
     1381 agacccgttt gagactaaac caccagtgac attggctcag gtggcagacg atctagaagc
     1441 gggtgatcga gtgcggtttg tggtgcgtgg accctcgttt accacgggtg acccggtgga
     1501 cttgaccgtg tcacatgtgg tgacagaaca agacccagaa agcaaccgtc tgcaagagca
     1561 aggcatgatg ttcttgcccg aaggcgagcg cttgttccta gacgagccca tgttcaatac
     1621 gccatatcaa gagaggcttt ctggctttga tttttaccta gatgaccggg tcgaagttgt
     1681 gagcgtactg tcgccggcac aacgactacc caaacaagtg ttctatatcc ccgccattgg
     1741 gttattgtta ttgatcattg tgttgcaacg tcgacgtcaa accaagcccg cgttttaaac
     1801 acaaagcgaa ggcaccatgt acaaaaacat tttgttgccc gtggatctat ccgatgaggt
     1861 gagctcaagc aaagccttgg ctgcggcact tgatctcacc acgagtgaga ccactttgca
     1921 cgtggtttcg gtattgccct cattcggtag tgcccaagtt gcgggctact tctctgctga
     1981 ctttgaaaaa caagcactca aacacttggg tgatgaactt tgcgcctggg ttcaagcgaa
     2041 agtacctagt gacatcaaag tcaaacccca tgtgctgcac ggcacgatct atcacgaagt
     2101 attaacggct gccgacaaac tcgcagctga cctgattgtg atcggtgcgc accgcccaga
     2161 actaaaagac tattttttag gacccaatgc cgcacg
//
LOCUS       DATBNL010000040         3012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10531, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000040 DATBNL010000000
VERSION     DATBNL010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10531"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VIC30_00650"
     CDS             complement(<1..201)
                     /locus_tag="VIC30_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005672586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HEY7802937.1"
                     /translation="MTNTVNVHLRPIDAEGLAAFAERGRNNPQARGTNKVHTVLEGQY
                     RSLNYVGSHEPVVVDEPPHLLGQ"
     gene            complement(198..908)
                     /locus_tag="VIC30_00655"
     CDS             complement(198..908)
                     /locus_tag="VIC30_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011493285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7802938.1"
                     /translation="MLVAFWWFLTDVTAAPNSLAARFSPTLAFEALLGLLAGPEIWHH
                     MAVSLKRVLVGLSMAVLIGVPLGLLLGWWDALNRAMSPTLQFLRMISPLSWMPIAVMA
                     FGIGDQPVYFLLTFAAVWPVMLSTLSGVKSVDKRWLELGHSLAANRREIITRIVLPAI
                     TNHILTGVRLAMGVVWIVLVPCEMLGVTAGLGYFILDTRDRLDYPELMATIVVIGALG
                     FLLDCALRTICQQRRVSS"
     gene            complement(1073..2260)
                     /locus_tag="VIC30_00660"
     CDS             complement(1073..2260)
                     /locus_tag="VIC30_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006385335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7802939.1"
                     /translation="MCSESQTRRDMLKLAGLFTVGGAAPLLSAFNAQAQPDANAPVRI
                     GYLPITDAAPLLIAHHQGFFEQAGIQADKPRLFRSWSQLVEAFISGQVDVVHLLSPMT
                     LWARYGSQVPAKIVAWNHINGSALTVRPEINKISDLGGLRVAIPFWYSIHNVVLQDLL
                     RQNGLTPVTNGGELASDEVELVVMAPSDMLPALANNSIAAYIVAEPFNAAAEIMGVGK
                     VLRFTGDVWRDHACCTVFMHERDLQNRPQWSQSVVTGIVRAQQWIAENRAATADILAR
                     ESGNRYTPHNQPVLAKVLLDDQSNAGSYLASGAVTHPDWQQHRIGFQPYPYPSYTEAL
                     VTKLKATTVQGNSAFLDDLDPSFAAQDLVDDRFVKQAIEALGGPNAFGLTANYTRTEE
                     IAG"
     gene            complement(2250..>3012)
                     /locus_tag="VIC30_00665"
     CDS             complement(2250..>3012)
                     /locus_tag="VIC30_00665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006483334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7802940.1"
                     /translation="GKSSILRVLAGLHRPATGQVFVNQAPLQQPHPLVAMAFQHPALL
                     PWLTVRQNVAFGLNFKSQSRSPRALSGQRVDDALADVGLTDAAGKYPDQISGGMAQRA
                     ALARCLARQPQVLLLDEPFGALDEVTRAHMQTLLLQLRQRHKLAVVLVTHDIDEALLV
                     SDRVGLLAGAPASLTHQWLLGRADHLTPRDLLQDTFVALRVEMLKALRHSMAAGSTRE
                     SAQAQLSTSLSTPVLAPAASSRHTQPQPKEYAHVL"
BASE COUNT          711 a          822 c          858 g          621 t
ORIGIN      
        1 ttggcccagt aaatggggag gctcgtcgac taccacaggc tcatggctgc ccacgtagtt
       61 caaggaacgg tattgacctt ccagtacggt atgaactttg ttggtgccgc gtgcttgagg
      121 attattgcgc ccgcgttcgg caaatgcagc caagccttcg gcatcgatgg ggcgaagatg
      181 aacgttgaca gtattggtca tgatgagact ctcctttgtt ggcaaatggt ccgtaatgcg
      241 cagtccagta agaaacccag cgcaccaatt accacaatgg tggccatcag ttctgggtaa
      301 tccagccggt ctcgggtgtc gagaatgaag taacccaacc cggcggtgac acctagcatc
      361 tcgcagggca ctaacacaat ccaaaccaca cccatggcta gccgaacgcc ggtcaggatg
      421 tggttggtaa tggccggtaa aacaatgcgg gtgatgattt cgcgacggtt ggcagccaga
      481 ctatggccta gttctagcca ccgtttgtcg accgatttca cgcctgacag cgtgctcaac
      541 atgaccggcc acaccgctgc gaacgtcaaa aggaaataca ccggctgatc tccaatgcca
      601 aacgccatta cggcgattgg catccacgac agcggcgaga tcatgcgcaa gaattgcagg
      661 gtcggggaca ttgcccgatt tagcgcgtcc caccaaccga gtaacaaacc caacggcaca
      721 ccaataagaa ctgccatgga cagacccacg agcacgcgct ttaggctaac ggccatgtga
      781 tgccaaatct ctggacccgc taacaatcca agcaacgctt caaatgccag cgtcggggag
      841 aatcgtgcgg ccaaactgtt cggtgcggca gtcacgtccg ttaagaacca ccagaaggcg
      901 acgagcatac caagcccgaa taatccgagt aagcccacga aaccttgcgg ccaccgccca
      961 gaaaaaggca gatgcgctgc cggacccatg cctggacgca atgccgaacc cagtgccgaa
     1021 cgtgctggtt tcgtggccaa gtgatttgga ttagtcatgt gatggcgctg cattaaccgg
     1081 caatctcttc agtgcgtgtg taattggcag ttaacccaaa ggcatttggt ccgccaagcg
     1141 cctcgatggc ttgttttaca aaccggtcat caacgaggtc ttgtgcggca aatgacggat
     1201 cgaggtcatc gagaaatgcg ctgttacctt gcacggtggt ggccttgagc ttggtgacca
     1261 aggcttcggt gtagcttggg tacgggtatg gttgaaaccc gattcggtgc tgctgccaat
     1321 cgggatgagt cacagcacct gacgccaaat aagaccccgc attgctttga tcgtctaaca
     1381 atactttggc taacaccggt tggttgtgtg gtgtgtagcg attgccgctt tcacgtgcca
     1441 ggatgtcggc agtcgctgcc cggttctcgg caatccattg ctgcgcgcga acaatgccgg
     1501 tgacaacaga ctgcgaccat tggggccggt tctgtagatc gcgctcgtgc atgaatactg
     1561 tgcagcaggc atggtcgcgc cagacgtcac cagtaaaacg taagaccttg ccaacgccca
     1621 tgatttcggc cgcagcgtta aacggctcag ccacaatata agcagcgatg ctgttgttgg
     1681 ctaacgcagg cagcatgtca gacggagcca tgacaacaag ctcgacttcg tcgctagcga
     1741 gctcgccacc attggtcaca ggcgtcagac cattctgacg cagtagatct tgcaacacca
     1801 cgttgtgaat ggaataccaa aacgggatcg ccactcgcag cccgccaaga tcgctgattt
     1861 tattgatctc tggtctgaca gttaaggccg agccattgat gtggttccac gccacgattt
     1921 tggctggcac ttgactgcca taacgggccc acagtgtcat gggcgacagc aaatgcacca
     1981 catcgacctg accgctgata aaagcctcaa cgagttgtga ccaactacga aacaaacggg
     2041 gcttgtcggc ttgtatgccg gcttgttcaa aaaaaccctg gtggtgagca atcagtagcg
     2101 gcgccgcatc cgtgatgggc agataaccga tgcgcaccgg cgcgttggcg tcaggctgtg
     2161 cttgagcatt aaacgccgac aacaatggag ctgcaccacc cacggtaaaa agcccagcga
     2221 gtttgagcat gtcgcggcgg gtctgggatt cagagcacat gtgcatactc cttgggctgc
     2281 ggttgtgtgt ggcgcgatga tgcagctggt gccaagactg gggtcgatag cgacgttgac
     2341 agctgggctt gagctgactc acgcgttgaa ccagcggcca tgctgtgcct gagtgcttta
     2401 agcatctcaa cacgcagcgc cacaaacgtg tcttgcaaca aatcacgggg tgtcagatga
     2461 tcggcgcgtc cgagcaacca ctggtgcgtt agagacgccg gtgcgccggc caacagaccc
     2521 acacggtcag ataccaacaa tgcttcgtcg atgtcatggg tgactagtac aacggccagc
     2581 ttatggcgtt gtctgagctg caacaacagg gtttgcatat gtgcgcgggt gacttcgtct
     2641 agtgcaccga atggttcatc gagtaatagc acctgaggtt gccgtgctaa acaacgtgcg
     2701 agcgcggcgc gttgtgccat gccaccggag atctggtctg ggtatttgcc agcagcatcc
     2761 gttagaccaa cgtcggctag cgcatcatca acgcgttgcc ccgatagtgc gcgaggcgag
     2821 cgtgattgag atttgaagtt caacccgaac gccacgttct ggcgtacggt caaccacggc
     2881 agtagtgcgg ggtgttgaaa cgccatcgca accaaagggt gcggctgctg cagaggcgcc
     2941 tgattgacaa atacctgacc ggtcgctgga cggtgtaatc ctgcgagtac gcgcagaatg
     3001 gatgatttgc cc
//
LOCUS       DATBNL010000041         1615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_100141, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000041 DATBNL010000000
VERSION     DATBNL010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100141"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VIC30_00670"
     CDS             complement(<1..655)
                     /locus_tag="VIC30_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015014972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEY7802941.1"
                     /translation="MNAPIDPRLTEWFTRGFDTDPDETQEWQAAFEALIQAAGPERAT
                     FILQELARTAQTKRLNWQPALCTPYINTIDVNDQPPFPGNLAIEEKLSSIMRWNALAM
                     VVRANQAYGELGGHIASYASGADLFETGFNHFFHGREGLADGQHRGDLVFLQPHSAPG
                     IYARAFLEGRLTETDLMHFRQEITATKQGTQGLCSYPHPMLMPDFWQFPTGSMGIGPI
                     "
     gene            784..1269
                     /locus_tag="VIC30_00675"
     CDS             784..1269
                     /locus_tag="VIC30_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011795422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEY7802942.1"
                     /translation="MNLDALDLKILQELQNDGSLANVELARRVQLSPSSCLNRVRALE
                     SSGVINRYVAIANPAALGLDLNVFISISLKTQSKAALAEFEQRISEHDEVMECYLMTG
                     DSDYLIRVAVANIGALEKFILEQLTPIPGIEKIRSGFALKQVRYKTALPLPVSSSKSK
                     R"
     gene            1477..>1615
                     /locus_tag="VIC30_00680"
     CDS             1477..>1615
                     /locus_tag="VIC30_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY7802943.1"
                     /translation="MSLRINDVAPDFTTDSTAGQLKFHEWVGHSYAILFSHPKDFTPV
                     CT"
BASE COUNT          398 a          390 c          415 g          412 t
ORIGIN      
        1 tgatggggcc aatgcccatg gagccggttg ggaactgcca aaaatctggc atcagcatgg
       61 ggtgggggta gctgcaaagt ccctgagtgc cttgtttggt cgccgtgatc tcctgacgaa
      121 agtgcatcag atccgtttct gtcagtcgtc cctctaagaa tgcccgggcg tagatgccag
      181 gcgcactatg cggctgtaga aaaaccaaat ctcctcggtg ttggccatca gccaggccct
      241 cgcggccgtg aaaaaagtga ttaaaccccg tttcaaagag atcggcgcca ctggcatagc
      301 ttgcaatgtg accgcctaat tcgccgtatg cctggttggc acgcaccacc atggccaacg
      361 cgttccagcg catgatggat gacagctttt cttcaatggc tagattgccg gggaaaggtg
      421 gttggtcatt gacatcaatg gtgttgatgt agggcgtgca tagggcgggt tgccagttca
      481 ggcgcttggt ctgtgctgtg cgagcaagtt cttgcaagat aaacgtggcg cgttcgggtc
      541 cagcggcttg aattagcgct tcaaatgctg cttgccactc ttgcgtctcg tcggggtcgg
      601 tatcaaatcc acgcgtaaac cattcggtta atctcgggtc gattggggca ttcatggcat
      661 ctctctatgg tcagtgcata actcaattct agagttcttt atgccgaatt tgtttctatt
      721 tgaagtgtat attgacgtta tagagaaata aaattctgtc aaaatcaatt tatggagaat
      781 tatatgaacc tcgatgcgct cgatctcaaa attcttcagg aactacaaaa tgatggcagt
      841 ctggccaatg tcgaattggc tcggcgggtg cagctaagcc cttcgtcctg tctgaataga
      901 gttcgagcac tggagtctag cggggtgatc aatcggtacg tggcgattgc caatcccgcc
      961 gcactcggtc ttgatttgaa cgtttttatc agtatcagcc tgaaaaccca gagcaaagcg
     1021 gcattggccg agtttgaaca acgcatcagc gaacacgacg aagtcatgga gtgctatctc
     1081 atgactggag atagcgacta tttgattcgc gtggccgtgg ccaacattgg cgcgctcgag
     1141 aagttcatcc tcgagcagtt aacaccaatc cccggcattg agaaaatccg ctcggggttt
     1201 gcgctaaagc aggtgcgcta caagaccgcg ttaccattgc cagtatcctc aagcaaatca
     1261 aagcgttagc atggcttgtg tgacagcacg agcggtgctc ttcacacaat ctagcaatta
     1321 gggctggtgc cgacatcttg tcgcaacaaa ttgatagtaa aaagatatta tgtctttata
     1381 aataataaat atcacaattg atcgaaatca atcgagatcc tgcgcaagcg gtgctaacct
     1441 aaacaagtct agtttcaacc tgtaggagta gtccacatgt ctttacgaat caatgatgtc
     1501 gccccagatt tcaccaccga ctcaacagcc ggtcagctga agtttcatga gtgggttggc
     1561 cacagctacg cgatcctttt ttcccacccg aaagatttca cgcctgtttg cacca
//
LOCUS       DATBNL010000042         2408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_179778, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000042 DATBNL010000000
VERSION     DATBNL010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179778"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(265..834)
                     /locus_tag="VIC30_00685"
     CDS             complement(265..834)
                     /locus_tag="VIC30_00685"
                     /inference="COORDINATES: protein motif:HMM:NF020136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CIA30 family protein"
                     /protein_id="HEY7802944.1"
                     /translation="MTTSAHAKPIILEDFNNATNSPTSPTSPTSPQDRWEFIADTVMG
                     GVSSGNVQFLTQDGQSFLKLSGMVSTANNGGFIQARLPLDQTATKQLPETAQGIWLKT
                     RGNGQKYFVHVRTSGTLLPWQYYQATFEVTDQWQDIKLAWDDFKPSGGLSGSILRDVP
                     LATKVKSIAIVAFGRDHEADIEVAKIGYY"
     gene            1498..2355
                     /locus_tag="VIC30_00690"
     CDS             1498..2355
                     /locus_tag="VIC30_00690"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7802945.1"
                     /translation="MLERTEEWFADEWQFGSMLGWSHGESLCGLSYACAVCLKTRRLK
                     PDRNFECGAAMSIIVVVEDSEPLNKLLCRTLQNDGHQVTGFLDAESLLESPALKDTEL
                     IVLDIQLPGESGLGLAARLRKLMPNLGILMLTTRTTNTHRIEGYDAGADYYLPKPVTP
                     QELSDAVQSLLNRKRNTTAAVVDEPLNRCVLARSAYAMSCNGRLLKLSDPENKILVAL
                     ASAPGQQLEYWQILEVLNSHQESVSRRTLDVRIHRLRAKLLDFIGSDNAIVSVRGVGY
                     RLNFELEIR"
BASE COUNT          551 a          582 c          646 g          629 t
ORIGIN      
        1 ttggctcaca cggcttacac ggctcacacg gcgtgacgat gatcgactga ctttcgaggg
       61 aaatcgaaac gcgctgacct acctgtaatc caagcatctc tgaaatttcc gcgggtgaac
      121 gcagtcccag gcccttgctc catcgctcga tctgttcatg tgcagtaacc attgcttgcc
      181 cctttgtcaa acccgcacgc attcttgttt gcatcgattg ggttcagact ctttctgttc
      241 ttcttaagtg cagcaatgac cggttcagta gtatccgatc ttagcgacct caatgtctgc
      301 ctcatggtcg cgcccgaatg ccacgattgc aatggatttc acctttgtgg caagcggcac
      361 gtcacgcaaa atactgcctg acaaaccacc cgatggtttg aagtcatccc atgccagctt
      421 gatatcttgc cattgatcag tcacctcgaa tgtggcttgg tagtactgcc aaggcagcaa
      481 ggtcccggat gttctcacat gcacaaaata cttctgtcca ttgcctcgcg tctttaacca
      541 aatgccttgc gcggtttctg gcagttgttt tgtcgcggtt tgatctagcg gcaatcttgc
      601 ttgaatgaaa ccgccattgt tggcggtgct gaccatgccg gacagtttca ggaatgattg
      661 accgtcttgg gtcaggaact gcacgttgcc tgacgacacc ccgcccatga cggtgtcagc
      721 gatgaactcc cagcgatctt ggggtgaggt gggggaggta ggcgaggtag gcgagttggt
      781 ggcgttattg aaatcttcga ggatgatcgg cttggcgtgg gcagatgtgg tcatgacagt
      841 gctcgcaagt aataaacaga tcgtcgctaa cagctgatgt gcaatttgtt gataggccaa
      901 gggccgcgac tgcagactgc accgggatcg tatcgagagc agaggaataa gcattaagtc
      961 aaccttcaaa tgagtcgttg tgtgatgtct gttcaaagaa gcgaatggtt tttgtcgtgc
     1021 ggaacaagcc atcttgactg cagaagccat cttgaccaca gcaggtctag gttacctgaa
     1081 ccgtgcgttt ctgtgagtgg cttagctgat tgattgattg cttgtttatt tggctatttg
     1141 gttatttggt tagattcgag cgacgccatc gctgctgcat cgggtgtgat atgtgcgcca
     1201 accgtgctga tcttgtcggt cttgcccgcg caagtcaatg ctcgcgaagc ccgggatcaa
     1261 cttactcaaa cacgcactca aaacactaag taaatcgtcg tatgcggccc cagtttgcac
     1321 aaaacagttg taaccaaaca aaagttcata taaaaacatg atctgttctg ggtctgacac
     1381 atataaaccc ctgtgccttg tttcgcttca gtcatagcag tcagttaagc gctaactgaa
     1441 gattagtgtc agctgctagc ggctaatgac taatgactaa tgacggcgtg acaggtagtg
     1501 cttgagcgta cggaggaatg gtttgctgac gagtggcagt ttggttcaat gctgggttgg
     1561 tcccatggtg agtcgctttg cgggcttagt tacgcttgcg ccgtatgcct caaaacccgc
     1621 cggctcaaac ctgatcgcaa ctttgaatgc ggtgctgcca tgagcatcat tgttgttgtt
     1681 gaagacagtg agccactgaa caagctattg tgccgcaccc tacaaaacga cggtcatcaa
     1741 gtcacgggat ttttggatgc ggagagtttg cttgagtcgc cggccctaaa ggacactgag
     1801 ctaattgttt tagacattca actgcctggc gaaagtggtc taggattggc ggcgcgcctt
     1861 agaaaactca tgccaaatct cggcattctc atgttgacca cgcgtacgac caatactcac
     1921 cgaatcgaag gctatgacgc gggggctgat tactatttac ctaaaccggt cacgccgcaa
     1981 gaattgtcgg atgcagtgca aagtctcttg aatcgcaaac gcaacacgac ggctgcagtg
     2041 gttgatgagc ctctgaaccg ttgcgtgctc gcgcgctcgg cttacgccat gtcttgcaat
     2101 gggcgcttac tcaaactttc agacccagaa aacaagatct tggttgcctt ggccagtgca
     2161 cctggtcagc agttggagta ttggcagatt ctggaggtgc tgaattccca ccaggagtct
     2221 gtgtctcgtc gaacactaga tgtccgtata catcgcttgc gcgccaaact cttggacttt
     2281 atcggctcgg ataatgcgat tgtgagtgtg agaggcgtgg gctatcggtt gaatttcgag
     2341 cttgagatca gataagcagg tatacccgcg agtagaaggg cctggcgttg gtaggtgcag
     2401 gttaatgc
//
LOCUS       DATBNL010000043         2042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_665, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000043 DATBNL010000000
VERSION     DATBNL010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1222
                     /locus_tag="VIC30_00695"
     CDS             239..1222
                     /locus_tag="VIC30_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011466162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HEY7802946.1"
                     /translation="MDRTERFYKIQSLLRQRGVVTMRQLCQALEVSRATVCRDLDYLR
                     DRLGVPVKWDAAERAYRLEGLETQNVGHELPGVWFSEREIHALLTMIELMSQLEPEGL
                     LSPRIAPFRERLEQLLEQGTGSAAEALKRIRIIPMAQREISSDHFQVITHALLKRQRL
                     HIAYYGRQADVIVPRDISPQRLVYYRDNWYLDAYCHLREGLRSFSIDAIRLAKVLDEP
                     VLVMNEGEVGSFFESSYGIFNGPSRQVARLRFTPFRARWVARERWHPDQVSTFMPDGS
                     YLLDVPYGQDWELIQDILKQGADVEVLAPTSLRAKVAEAIAAMGWVYQPSQ"
     gene            1370..1534
                     /locus_tag="VIC30_00700"
     CDS             1370..1534
                     /locus_tag="VIC30_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802947.1"
                     /translation="MVFSAARAGKGARQQWGETTGKALRLRKSLLVLFALGALAGIGA
                     AMLAYLSVGL"
     gene            1600..>2042
                     /gene="bfr"
                     /locus_tag="VIC30_00705"
     CDS             1600..>2042
                     /gene="bfr"
                     /locus_tag="VIC30_00705"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004811213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEY7802948.1"
                     /translation="MKGNAKIIKTLNELLAGELTAVDQYLIHGEMYADMGLAKLAEKT
                     LHESEHEKEHARAMIQRILFLEGKPDLSKREGLNVGKDVPAMLKSDLEVEYRVAKNLK
                     AAIVDCEKAGDFVTREALVTQLEDTEMDHAYFLEKQLRQIELMGL"
BASE COUNT          477 a          498 c          582 g          485 t
ORIGIN      
        1 aaatcttatg aattaaggcg tttaggtgac tctgaccccg cacaccactg aactttcctt
       61 taacctaagc ccaagttagt tactgttgat cgcaagtctt ttgtcacgaa tcggttcgct
      121 tagaaaaagc ttcgtctagg caaaactgcg cttaagaaaa gctgcgcaac gccatcgatg
      181 gtgaacagtc ggtaacgaca atgacgtgag atacgcactt agtgagatat gcgctgatat
      241 ggaccgtaca gaacgtttct acaaaatcca gtccctgttg cgtcagcgcg gggtcgtgac
      301 catgcggcaa ttgtgtcagg cgcttgaggt ctcgcgcgcg acggtttgcc gtgatctgga
      361 ttatttacgc gaccgtttgg gcgtgccggt caagtgggat gctgctgagc gcgcctaccg
      421 attggaaggt ttggaaacac aaaacgttgg tcatgagctg ccgggcgtgt ggttcagtga
      481 acgtgaaatc cacgccttgc tcaccatgat agagctcatg tcacagctag aacccgaggg
      541 gctgctgtca ccgcgcatcg caccgtttcg tgagcgtctc gagcagttgc tggagcaggg
      601 cacaggcagc gctgctgaag cactcaagcg cattcgcatc atccctatgg cgcagcgcga
      661 aatttccagt gaccattttc aggtgattac gcatgcctta ttgaaacgtc agcgtctgca
      721 cattgcgtat tacggtcgcc aagccgatgt gattgtgccc cgtgacattt ctccccagcg
      781 cttggtgtac taccgcgaca actggtacct cgatgcgtat tgtcatctgc gcgaaggttt
      841 gcgcagcttc tcgattgacg ccattcgatt ggccaaggtc cttgacgaac cggtgctcgt
      901 catgaacgag ggggaagttg gttcgttttt tgagagtagc tacgggatct ttaacggacc
      961 gagccggcag gtcgcgagac tgaggttcac gccgtttcgc gctcgatggg ttgcgcgcga
     1021 acgctggcac cccgatcaag tcagcacgtt catgcccgat ggcagctacc tgctagacgt
     1081 cccctacggt caagactggg aactgatcca agacatcctg aagcaaggcg ccgacgttga
     1141 agttttggcg ccgacgagct tgcgtgccaa ggtggccgag gccatcgctg ccatgggctg
     1201 ggtgtaccag cccagccagt gagccttctg tacacgccca agtcactgtc acttccgcca
     1261 agtttgatgc ccgtcataga acaaagatgg ttttctgtgg aaaaacttgc gttttcacat
     1321 aaacttgaat ataaatagta atcgctctca attgcattaa ggaaaagcca tggtttttag
     1381 tgcagctcgt gcaggtaaag gtgctcggca acagtggggt gagacgaccg gcaaagcctt
     1441 gcgtctacgt aaatcactgt tggtgttgtt tgcgctgggc gcgcttgccg gtattggggc
     1501 ggccatgttg gcgtatttga gtgttgggct ttagcccagt gtgacgacgg gatccgtgaa
     1561 aacacttgat tgcgggttca aaacgataag gatgtgaaat tgaaaggcaa cgcaaagatc
     1621 attaagacct tgaacgaact gctcgctggt gagttgaccg ccgttgatca gtacttaatc
     1681 catggcgaaa tgtatgccga catgggttta gccaagctag cagaaaaaac cctgcacgag
     1741 tccgagcatg agaaagagca tgcgcgcgca atgatccagc gcattctgtt tctcgagggc
     1801 aaaccggatt tgtccaaacg cgagggcttg aatgttggca aagacgtgcc cgcaatgctg
     1861 aagtctgatt tagaagtcga gtatcgcgtg gctaaaaact tgaaagccgc gatcgtcgac
     1921 tgtgagaagg cgggtgactt tgtcacgcgc gaagcgttgg tgactcagct tgaagatact
     1981 gagatggatc atgcctactt cctggaaaag cagttgcgcc agattgagct gatgggccta
     2041 ga
//
LOCUS       DATBNL010000044         3894 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_169865, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000044 DATBNL010000000
VERSION     DATBNL010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3894
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169865"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /gene="zapE"
                     /locus_tag="VIC30_00710"
     CDS             complement(<1..681)
                     /gene="zapE"
                     /locus_tag="VIC30_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEY7802949.1"
                     /translation="MNVTEYLEQALAQRGFKADAAQRRAVERLQVFYDEWVAFRSKRS
                     NAFKKLIKRPSVPRGVYFWGGVGRGKSFLMDAFYATVPVVRKTRLHFHEFMRGVHREL
                     EEVKGQQDPLDEVAKRIARRYRLICFDEFHVSDVADAMILYKLLLRLFEHGTSFVMTS
                     NYEPSTLYPDGLHRDRILPAIDLIYARMDVMNVDSGIDYRRRSLEQVQSYYTPLDDAA
                     TAALQKAFD"
     gene            complement(793..2220)
                     /gene="lpdA"
                     /locus_tag="VIC30_00715"
     CDS             complement(793..2220)
                     /gene="lpdA"
                     /locus_tag="VIC30_00715"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019653132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY7802950.1"
                     /translation="MSKQFDVVVIGAGPGGYIAAIRAAQLGMKVACIDAWQNGKGGPA
                     PGGTCTNVGCIPSKALLQSSEHFEQVNHHFGEHGIDVKGVTLKLDKMLGRKNDVVKQN
                     NDGILYLFKKNKVEFFHGTGSFAGQADGSYQVKVSGTSDADLVAKHVIVATGSSPREL
                     PGLPFDEKQVLSNDGALNIDAVPKRIGVIGAGVIGLEMGSVWRRLGAEVTVLEAMPQF
                     LAAVDETIAKEAAKVFKQQGLNIHMGVKIGEIKKTARTITVPWTDADGKEQKLIVDKL
                     IVSIGRVPYTGGLDATKVGLKLDERGFVEVDGDCKTNLPNVWAVGDVVRGPMLAHKAE
                     EEGVAVAERIAGQHGHVNFNTIPWVIYTAPEIAWVGQTEQQLKADGVKYKSGSFPFMA
                     NGRARAIGDTTGMVKILADAQTDEVLGVHIIGPVASELIAEAVTIMEFRGAAEDIARI
                     CHAHPTLSEAMKEAALAVDKRTLNL"
     gene            complement(2233..3459)
                     /gene="odhB"
                     /locus_tag="VIC30_00720"
     CDS             complement(2233..3459)
                     /gene="odhB"
                     /locus_tag="VIC30_00720"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004566345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEY7802951.1"
                     /translation="MSITEVVVPQLSESVSEATLLAWKKQPGEAVEADEILIEVETDK
                     VVLEVPAPASGVLTEIVKGDGSTVTSGELLAKIDKSATAAAAPKAEPAAAPEAEPAAA
                     AAPAAAPAQSASAAGKASPAANKILAEKGMSADGMTGSGRDGRVTKADAMAADTKSGG
                     SSAAAPVPAMGASLDGRPEQRVPMSRLRARVAERLLQSQQENAILTTFNEVNMQGVID
                     LRNRYKEKFEKEHGVKLGFMSFFVKAAVAALKRYPVVNASVDGKDIIYHGYFDIGIAV
                     GSPRGLVVPILRNADQMTIADVEKTIADFGKRAADGKLGIEEMTGGTFSISNGGVFGS
                     MLSTPIINPPQSAILGIHATKERAVVENGQVVVRPMNYLALSYDHRIIDGREAVLALV
                     AMKEALEDPQRLLLDI"
     gene            complement(3518..>3894)
                     /gene="sucA"
                     /locus_tag="VIC30_00725"
     CDS             complement(3518..>3894)
                     /gene="sucA"
                     /locus_tag="VIC30_00725"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004526855.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEY7802952.1"
                     /translation="VLACSGKVYYDLVHARADRKANDVAILRVEQLYPFAHKLYETEL
                     RKYPKATEVVWVQDEPQNQGPWFYVEHHLYENLNKGQKLAYAGRPASASPAVGYLAKH
                     LEQQKTIVEQAFGRIKSFALTK"
BASE COUNT          912 a         1137 c          953 g          892 t
ORIGIN      
        1 gtcaaaggct ttttgtaagg ctgctgtggc tgcgtcgtct aacggtgtgt aatagctttg
       61 aacttgttct agggaacgcc ggcgataatc aatgccgcta tcgacattca taacatccat
      121 gcgcgcataa atcagatcga tggctggcaa aatcctatcc cgatgcagac catctggata
      181 aagtgtcgac ggctcgtaat tggatgtcat cacaaacgat gtgccgtgtt cgaatagcct
      241 gagcaaaagc ttgtacagga tcatcgcatc ggccacatcc gagacgtgaa actcatcgaa
      301 acaaatcagt cgataacggc gtgcgatccg tttggccacc tcatcaagcg gatcctgctg
      361 acctttaact tcttcgagct cgcggtgcac gccacgcatg aactcatgga agtgcaaacg
      421 cgttttacgc accacgggca ccgtggcata gaacgcgtcc atcaaaaagc tcttgccacg
      481 ccctactccg ccccagaaat agacaccacg tggcaccgat gggcgtttga tcagcttctt
      541 aaaggcattg gagcgtttgc tgcgaaacgc aacccactcg tcataaaaca cctgcaaccg
      601 ctcaaccgcg cgccgctggg ccgcatcggc tttaaaacca cgctgtgcga gggcttgctc
      661 gagatattcg gttacgttca tgggccaaat aaatgggcac tgacgccaag gacagtgccc
      721 aaatccaaac aggttggctc taagctcaat catgggacac ggacaacagt ccgtgtcctc
      781 tagattcaga acttagaggt ttaacgtgcg cttgtctact gccaaggccg cctctttcat
      841 ggcttcggac aaggtcggat gcgcatggca aatccgagcg atgtcctctg cagcaccacg
      901 gaactccata atggtgaccg cctcggcgat cagctctgaa gccaccggac caatgatgtg
      961 cacaccgagc acctcatcgg tttgcgcatc agccaagatt ttgaccatac ccgttgtgtc
     1021 accaatggca cgtgcgcgtc cattggccat gaacgggaag gagcctgact tgtatttgac
     1081 gccatcggcc tttagctgct gctcagtctg accaacccac gcgatttcag gcgcggtgta
     1141 gatcacccaa gggatggtat tgaaattgac atgaccgtgt tgaccggcaa tacgctcagc
     1201 cacagccaca ccctcttcct cggccttgtg cgcaagcatc ggcccacgca ccacatcgcc
     1261 caccgcccaa acattaggca ggttggtttt gcagtcaccg tcgacttcca caaagccacg
     1321 ctcatcgagc tttagaccca ctttggtggc gtctaagcca cccgtataag gtacgcgacc
     1381 aattgaaaca atcagcttgt cgacaatcag cttttgctct ttaccatcgg catcggtcca
     1441 aggcaccgtg atcgttctag cggtcttttt gatttcacca atcttgacac ccatgtggat
     1501 attcaagcct tgttgcttga acaccttggc tgcttctttg gcgatggttt cgtctacggc
     1561 tgcgaggaac tgcggcatgg cttctagcac cgttacctca gcacccaaac gacgccaaac
     1621 gctacccatt tccaaaccga tcacgccagc accgatcaca ccaatacgct taggcacagc
     1681 gtcaatgttg agcgcgccat cattagacaa gacctgcttc tcgtcaaatg gtagacctgg
     1741 caattcacgc ggtgacgagc ctgtggccac aatcacgtgc ttggccacga gatcagcatc
     1801 gctggtgccg ctgaccttga cttgatagct gccatcggct tgcccggcaa acgaacccgt
     1861 gccgtgaaag aactccactt tgttcttttt aaacaagtac aggatgccgt cgttgttttg
     1921 tttaacgacg tcatttttgc gacccagcat tttgtcaagc ttaagtgtca cgcccttgac
     1981 gtcgatgccg tgctcaccaa agtgatgatt cacttgctca aaatgttcag acgattgcag
     2041 cagcgccttt gatggaatac atccaacgtt ggtacacgta ccaccgggcg cagggccgcc
     2101 cttgccgttt tgccaggcat cgatacatgc aaccttcatc ccaagctgtg ctgcccgaat
     2161 tgcagcgata tagccaccag ggcccgcgcc aattacaacc acatcaaact gtttagacat
     2221 tgatcttccg ttttaaatat caagcaacaa gcgctgcgga tcctcaagcg cctccttcat
     2281 ggccaccaag gccagcacgg cttcgcgacc gtcaatgatg cggtggtcgt aagacagtgc
     2341 cagatagttc atgggtcgca caacaacctg accgttttcc acaacagcgc gctctttggt
     2401 ggcatgaatc cccaaaatcg ccgattgcgg agggttaatg atcggtgtgg acaacatcga
     2461 accaaataca ccaccattcg aaatcgagaa agtgccgccg gtcatctctt caatgcccaa
     2521 cttgccgtca gcggcgcgct taccaaagtc agcgatcgtc ttctcaacat cagcaatcgt
     2581 catttggtcc gcattacgca gaatgggcac aaccagacct cgtgggctgc ccaccgcaat
     2641 accgatatca aagtaaccgt gatagatgat gtctttgcca tcgaccgagg cgttgacaac
     2701 cgggtaacgc ttgagcgcag caaccgctgc cttgacaaag aacgacatga acccaagctt
     2761 cacaccatgc tctttctcaa acttctcctt ataacggtta cgcaagtcaa tcacaccttg
     2821 catgttgact tcgttaaagg ttgtgagaat ggcgttttct tgttgcgact gcagcaagcg
     2881 ctcagccacg cgcgcgcgca ggcggctcat tggcacgcgc tgctcgggac ggccatcgag
     2941 cgaggcgccc attgctggca caggtgcagc agccgaagaa ccaccagatt tggtatcagc
     3001 ggccatggca tctgccttgg tgacccgacc gtcgcgacct gagccggtca tgccgtcagc
     3061 agacatgcct ttttcagcga gaatcttgtt agccgctggc gaagccttac cggccgcgct
     3121 agctgactgt gcaggtgcgg cagcaggtgc ggctgctgct gcaggttcag cttcaggcgc
     3181 cgcagcaggc tcagctttgg gggcagcagc ggcggttgcc gacttatcga tcttggctaa
     3241 caactcaccg gatgtcacgg tgctgccatc gcctttgacg atttcagtca atacgcctga
     3301 agccggtgcc ggcacttcaa gcaccacttt gtcggtctcg acttcgatca ggatctcgtc
     3361 ggcttcaact gcttcgccag gctgtttttt ccaggcaagc aaggttgcct ctgaaactga
     3421 ctcggacagt tggggtacca ctacttctgt aatagacatg tctagtttcc gtaattatca
     3481 attcaatgaa atagagttcg cacgcacacg cttcatgcta cttggtcaaa gcaaacgact
     3541 tgatgcgacc aaaggcttgc tccacaatgg tcttctgctg ctcaaggtgc ttggccaaat
     3601 aacccaccgc tggcgaagcc gaagccggcc gacctgcgta tgcgagtttt tgacctttgt
     3661 tcagattctc gtacaggtgg tgctcaacat agaaccaagg accttggttc tgcggctcat
     3721 cttgcaccca taccacctcg gtagccttgg ggtacttgcg cagttcagtc tcatagagtt
     3781 tgtgcgcaaa tggatagagc tgttccacac gcaagatagc cacgtcattg gctttgcggt
     3841 cagcacgagc atgcacgagg tcgtaataca ccttgccaga gcaagccaat acac
//
LOCUS       DATBNL010000045        10490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_179794, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000045 DATBNL010000000
VERSION     DATBNL010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 10490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10490
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179794"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /gene="hisC"
                     /locus_tag="VIC30_00730"
     CDS             complement(<1..1071)
                     /gene="hisC"
                     /locus_tag="VIC30_00730"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEY7802953.1"
                     /translation="MSQFWSPAIRNLTPYVPGEQPQIDNLIKLNTNEHPLGPSPRALE
                     AIKQATSDRLRLYPDPAATALKSAIAKHHGLSPEQVFVGNGSDDVLNLSFFTFFRQSR
                     PLLFSDLTYGFYPVYAEVHGIDHHVVPLDEDFRIRPQDYLGQGHPKAGGIIIANPNAP
                     TGIALDPDSVERIVAGNPEAVVLIDEAYVDFGGQSAARLINRYPNVLVSHTLSKSRSL
                     AGMRVGYALGSEELIQGLERVKDSTNSYPVDQLAQVAATAAIEDDAYFTAACQMVIEN
                     REQLTRDLQAMGFEVLPSAANFVFARHPDHDGAALAGWLRERAILVRHFKRPRVDQFI
                     RITVGTSEQCASLISALRACVCP"
     gene            complement(1077..2516)
                     /gene="der"
                     /locus_tag="VIC30_00735"
     CDS             complement(1077..2516)
                     /gene="der"
                     /locus_tag="VIC30_00735"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEY7802954.1"
                     /translation="MALKPVVTLVGRANVGKSTLFNRLTRSRAALVADFAGLTRDRHY
                     GEGRVGDVPFIVIDTGGFEPVAKHGILHDMAKQTEQAIAESDVIIFLVDARAGLNAHD
                     QEIASLLRRSGQPVLLCVNKAEGMRHGAAIAEFHELGLGQPHAISASHGDGVVDLIEQ
                     ALAPFAPPPRPQSAEDGEGADSFEGAEGAGRADGANADESDESNVELVDVEDHRLKLA
                     IVGRPNVGKSTLINTLVGENRVIAFDLPGTTRDAIEVEFERDGQSYTLIDTAGLRRRG
                     KVFEAVEKFSVIKTLQAIEACNVVLLLLDAQQEISDQDAHIAGFVVESGRALVVAINK
                     WDSADTERRERIKREFDRKLKFLAFAKMHHISALRGQGVNAVMRSVKSAHAAAFCKLS
                     TPKLTRVLQDAVAQQPPPRKGIFRPKMRYAHQGGQNPPRIIVHGNALDAISPPYRRYL
                     ESKFRDVFELAGTPLRIEFKSSHNPYVDG"
     gene            complement(2521..3681)
                     /gene="bamB"
                     /locus_tag="VIC30_00740"
     CDS             complement(2521..3681)
                     /gene="bamB"
                     /locus_tag="VIC30_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HEY7802955.1"
                     /translation="MQIVKELRSQSSRWLLPVVAALSVTLAGCAGSDSRNEPAELTEF
                     TPTVQTSTAWRVSVGSETTYGFAPMIVGNTIYAASSDGKVARINGLEGTTVWNKEVAS
                     ELAAGVGADDQTVAVVTRGGEVIALDTNGQEKWRAQASSEVSVVPWVGNGVVIVRAGD
                     YRVQAFNAANGERIWNVQRPGPALALRAPARMNEVQDLVLTGMPGGRLLAIVPDSGAV
                     VWEGIVAVPRGASDLERVNDVVGQPLVIGDLLCAVAYQGRVTCFNVAEGGRTVWANNF
                     SSIVGLAADDTRVYVPNNRDRVHAYGLQDGEAVWVQDALLNRRLTEPAVVSGSVVTGD
                     LDGYVHALSAATGELAARLSVGGGAMVAPVQSFNGGALVQAGDSSLVLIRLN"
     gene            complement(3692..4324)
                     /locus_tag="VIC30_00745"
     CDS             complement(3692..4324)
                     /locus_tag="VIC30_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY7802956.1"
                     /translation="MAYDLEEQEQLAQLKAWWDKYGTITLGLLSLALVIVLGWQGWNW
                     YENNQSQQARGYYEALEQAAAEPNEDSTPRVVAAMQALQKDFAQTDYAARAALVASDA
                     LRDSGDLAAAQDPLRWLAGSNHVALAPVAKLRLAGLLLDQDKYDEALAVLDTPPDSFK
                     GLYADRRGDILAAQGKREEAVAAWREAIAALPATDTLANVVQLKIDTLGS"
     gene            complement(4329..5687)
                     /gene="hisS"
                     /locus_tag="VIC30_00750"
     CDS             complement(4329..5687)
                     /gene="hisS"
                     /locus_tag="VIC30_00750"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003799315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEY7802957.1"
                     /translation="MTTEFKKVAAIRGMNDVLPDVSHAWEALEAQLRTWLAQYGYLNM
                     RSPILEHTRLFTRGIGEVTDIVEKEMYTFVDSLNGESLTMRPEFTAGLVRAAIEHNLL
                     YDRARRIYSMGPVFRHERPQRGRYRQFHQLDVEALGFAGPDVDAEMILMTARLWRLLG
                     IEDMTLELNSLGQLSERQAHRAALIEHLEKHRDVLDEDGQRRLYTNPLRVLDTKNPAM
                     QDMANAAPKLFDFLGDESKAHFAGVCERLDEAGIAYRLNPRMVRGLDYYNLTVFEWVT
                     DKLGAQATVCGGGRYDDLISLLGGKPAPAVGFAIGMERLLDLWLQCQPQAAVPECQVY
                     VIHQGEMAQRRAAMLGEQMRDAGLSVIVHAGAASFKAQFKRADSSGAQIAVILGEDEL
                     TSGQASVKWLRASATDAQQQRVGFDALAGTLANTLNEALAFTQASAPSPTEPDTTASK
                     EG"
     gene            complement(5755..7038)
                     /gene="ispG"
                     /locus_tag="VIC30_00755"
                     /gene_synonym="gcpE"
     CDS             complement(5755..7038)
                     /gene="ispG"
                     /locus_tag="VIC30_00755"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEY7802958.1"
                     /translation="MSNNQNVSQDRESTVKPVGPLPRRQTRQARVTWGDTVVRVGGDA
                     PVVVQSMTNTDTADAIATAIQVKELALAGSEIVRITVNTPEAAQAVPAIREQLDRMGV
                     SVPLCGDFHFNGHKLLTQYPECAATLSKYRINPGNMGGGKRRDDNFAQMIEVACRHDK
                     PVRIGVNWGSLDQELLARMMDENSQRPAPLEAQAVMREALVVSAISNAQRAEELGLPG
                     DAIVLSCKVSHVQDLIAVYRDLSARCDYPLHLGLTEAGMGTKGVVASTAALAVLLQEG
                     IGDTIRISLTPEPGGDRCREVVVAQEILQTMGMRAFTPMVIACPGCGRTTSTVFQELA
                     DDIQRYLREQMPIWRSQYPGVESMNVAVMGCVVNGPGESRHADIGISLPGTGEVPAAP
                     VYVDGERTVTLKGDRIAQEFQAIVQDYIEKRYGQQ"
     gene            complement(7055..7537)
                     /locus_tag="VIC30_00760"
     CDS             complement(7055..7537)
                     /locus_tag="VIC30_00760"
                     /inference="COORDINATES: protein motif:HMM:NF024805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7802959.1"
                     /translation="MSLDDPKTVPLKFESPPEPSEPVTAIAALRTIRVARGLSLDDVS
                     ARIKYRPHVIDALENERWDELPKGIGLKTLAKSYARFLDVDFEALEPVLKEHMPLTRA
                     GIADHTSTRAIGESVEEGGSSGSLGWVVLVLVVIGALLGAAIWLGMVPDGWLPLWLEG
                     "
     gene            complement(7540..8733)
                     /gene="rlmN"
                     /locus_tag="VIC30_00765"
     CDS             complement(7540..8733)
                     /gene="rlmN"
                     /locus_tag="VIC30_00765"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009455884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEY7802960.1"
                     /translation="MQVATSNHTNLIGMDYTSLVEMVGGWGDKPFRAKQLMRWVHQRG
                     ESDFSKMTDLAGAFRARLASQCQIVAPDVLERHVASDHTHKWLFDVGNNNAIETVFIP
                     EDDRGTLCISSQAGCTVACPFCSTGHQGFSRNLTSAEIIGQLWWARHDLLANGAVTRL
                     GAAPRLSDPTGSSTVCDRVVSNVVFMGMGEPLLNYDAVLGALRLMLDDHAYGLSRRRV
                     TVSTSGVVPMMDRLGKDCPVALAVSLHAPNDALRDHLVPLNKKYPLRELLAACERYLE
                     VAPRDFITFEYVMLQEVNDDLQHAHELVDIARQVPCKINLIPFNPFPDSGLQRSSSNR
                     VHTFARVLQDAGVVTTIRKTRGDDIDAACGQLAGDIKDRTKLTQRRLAQSPAHALKSI
                     AVTKA"
     gene            complement(8835..9260)
                     /gene="ndk"
                     /locus_tag="VIC30_00770"
     CDS             complement(8835..9260)
                     /gene="ndk"
                     /locus_tag="VIC30_00770"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEY7802961.1"
                     /translation="MSVERTLSIIKPDAVAKNVIGQILGRFEQAGLKVIAARMMQLSP
                     EEAGRFYAVHKERPFFKDLVDFMVSGPVMVQVLEGENAIQTNRDLMGATDPKKADAGT
                     IRADFAESIDANAVHGSDAPETAANEIAFFFPEMNIHSR"
     gene            9555..>10490
                     /locus_tag="VIC30_00775"
     CDS             9555..>10490
                     /locus_tag="VIC30_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY7802962.1"
                     /translation="MTNNTASAADSLPKSFEPAEIESRWYPKWESSGYFQAGQHVEGA
                     SPDLPPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMRGQDTVFVPGTDHAGIAT
                     QIVVERQLDAQKLSRHDLGREKFTEKVWQWKQESGGTITGQVRRLGASADWPREYFTM
                     DERMSVGVAETFVRLYEQGLIYRGKRLVNWDPKLLTAVSDLEVQSVETKGSLWHICYP
                     FVDGPQIIEQDGQTETLRGLTIATTRPETMLADGALCVHPDDPRYQHLVGKMVDLPLC
                     DRQIPIIADDFVDMDFGTGVVKITGAHDFNDYACAI"
BASE COUNT         2411 a         3140 c         2727 g         2212 t
ORIGIN      
        1 ggggcaaacg caggccctca atgcactaat cagactggca cattgctcag aagttcccac
       61 cgtgatgcgg ataaattgat cgactctggg tcgtttgaag tgacgcacca aaatggcgcg
      121 ctcacgtaac cagccagcta aggctgcgcc atcatgatct ggatgacgtg caaatacgaa
      181 atttgctgcc gagggcagca cctcaaaacc cattgcctgc aaatcacggg tcagctgctc
      241 tcggttctca atcaccattt ggcaggcagc cgtaaagtaa gcatcatctt caatggctgc
      301 ggtcgctgct acttgcgcaa gctgatccac cggataggaa ttggtgctgt ctttaacgcg
      361 ctcaagccct tgaatcagct cctccgagcc aagggcataa cccacacgca tgccagctag
      421 cgaacgcgac tttgacagcg tgtgcgatac caacacattg ggatagcggt tgatgagccg
      481 agctgcactt tgccccccaa aatccacgta ggcttcatcg ataagcacga cggcctccgg
      541 attacccgcc acgatacgtt cgacgctgtc tgggtcaagc gcaatacccg tgggcgcatt
      601 gggattggca ataatgatgc cgccagcctt ggggtggccc tgtcctaggt agtcctgcgg
      661 acggatccga aagtcctcat ctagtggcac cacgtgatga tcaatgccat gcacctcagc
      721 gtagaccgga taaaagccat aggtcaaatc agaaaacaac aagggccgtg actgccgaaa
      781 aaacgtaaaa aacgacagat tcagcacatc atcggaccca ttaccgacaa acacctgctc
      841 gggtgacaag ccatggtgtt tggcaatggc cgatttaagg gcggtggccg cggggtcagg
      901 atacagacgt aaacgatcgc ttgtggcttg cttgatggcc tcaagcgcgc gcggcgaagg
      961 ccctaacgga tgttcattgg tattgagctt aatgaggttg tcgatttgcg gctgctcacc
     1021 tggcacatag ggcgtgaggt tgcgaatcgc gggactccag aactggctca taacaatcaa
     1081 ccgtcaacgt aagggttgtg agaagacttg aattcaatac gcaacggcgt gccggcaagc
     1141 tcaaacacat cgcgaaactt cgactccaaa taacgccgat aaggtggcga aatggcgtca
     1201 agcgcattgc cgtgcacgat gatgcgcggc gggttttgtc cgccctgatg ggcgtagcgc
     1261 atcttgggcc ggaaaatgcc ttttcttggt ggcggttgct gcgcgaccgc atcttgcagc
     1321 acacgcgtga gcttgggcgt cgacaactta caaaacgcag ccgcgtgcgc ggacttaacc
     1381 gatcgcatca cggcgttcac gccttggcca cgaagcgcag aaatatggtg catcttggca
     1441 aatgccaaga acttgagctt gcgatcgaac tcgcgcttaa tacgttcgcg ccgttcggtg
     1501 tctgcgctgt cccatttgtt aatggccacc accagcgccc ggccagactc gaccacaaaa
     1561 cccgcgatgt gcgcgtcctg atcagaaatc tcttgctgcg catcaagtaa aagcagcacc
     1621 acgttgcagg cctcaatggc ctgcaacgtt ttaatcacag aaaacttttc tacggcttca
     1681 aacaccttgc cgcgacgtcg caagcctgcc gtatcaatta gggtgtagga ctgaccatca
     1741 cgctcgaact ccacctcgat ggcgtcgcgc gtggtacccg gcaagtcaaa cgcaatgacg
     1801 cggttctcgc ccaccagtgt gttaatcaag gttgacttgc ccacattggg gcggcccacg
     1861 atggcgagct tgagacggtg atcttcgaca tcgactagct caacattgga ctcatcggac
     1921 tcatcggcat ttgcaccgtc ggctctaccg gcaccttcag caccttcaaa actatcagca
     1981 ccctcaccgt cttcggcgct ttgcggccga ggtggtggcg caaacggtgc caacgcctgt
     2041 tcgatcaagt caaccacgcc atcaccatgc gaggcagaaa tggcatgcgg ctgcccaaga
     2101 cctaactcat gaaactctgc aatggctgcg ccatgacgca tgccttcggc tttgttcacg
     2161 caaagtaaaa cgggttgacc ggagcgacgc aacagcgaag cgatctcttg atcatgggcg
     2221 tttagacctg cacgcgcatc caccagaaaa ataatcacgt ccgactcggc aattgcctgt
     2281 tcggtttgct tggccatgtc gtgcaagatg ccgtgtttgg ccaccggctc aaaaccgccg
     2341 gtgtcaatca cgataaaggg cacatcaccc accctaccct cgccataatg acgatctcgg
     2401 gtcagccccg caaaatctgc gaccaacgcc gcacgcgagc gcgttaatcg gttaaagaga
     2461 gtcgacttgc ccacattggc acggcctaca agcgtcacga ctggtttaag cgccacggtg
     2521 ttaattcaac ctaatcaaaa cgaggctact gtcgccggct tgcaccaacg caccgccatt
     2581 aaaggactgc accggtgcca ccatggcacc accacccaca ctcaagcgcg ctgcgagctc
     2641 gccggtggca gctgacagtg catgcacata accatcgagg tcgccagtga ccaccgagcc
     2701 cgagactaca gcaggttcag tcaagcgccg attgagcaag gcgtcctgca cccaaaccgc
     2761 ttcaccatct tgcaaaccat aggcatgcac ccggtcacga ttgttaggca cataaacgcg
     2821 ggtatcgtcg gcggccagac caacgatgct agagaagttg ttggcccaaa ccgtgcgacc
     2881 cccttcagcg acattaaaac aagtcacacg tccctggtag gccacagcac acaacaagtc
     2941 accaatgacc agcggttggc ccaccacgtc attgacgcgc tcaaggtcgc tggcaccgcg
     3001 tggcaccgcc acaatccctt cccaaaccac cgcgccgctg tctgggacga tggccagcaa
     3061 gcgcccgcca ggcatgcccg tgaggacaag gtcttggacc tcgttcatgc gcgccggggc
     3121 acgtagtgcc aaggcaggac ctgggcgctg cacgttccag atgcgttcac cgttggctgc
     3181 attaaatgcc tgcacacgat agtcgccagc tcgcacaatc acgacaccat tgccgaccca
     3241 cggcacgacg ctgacttcgc tagaagcttg cgcacgccat ttctcttggc cattggtgtc
     3301 aagcgcgatc acctcaccgc cgcgggttac aacagcgaca gtctggtcat ccgccccgac
     3361 accggcagcc agttcagagg ccacctcttt gttccagacg gtggtgcctt ctaagccatt
     3421 aatgcgtgcg actttgccat cgcttgaggc ggcataaatc gtgttgccca caatcatggg
     3481 ggcaaatcca tacgtggtct cactgcccac cgatacgcgc caagccgtgc tggtttgcac
     3541 cgttggtgtg aattcggtca actcagccgg ttcattgcga ctatccgatc ccgcgcaacc
     3601 cgcaagcgtc acgcttaatg ctgctactac aggcaacagc cagcgactgc tttgggaccg
     3661 cagttctttg acaatctgca tctgcttcac ctcaagaacc tagtgtgtcg attttaagtt
     3721 ggaccacatt ggccagtgta tccgtggcgg gcagtgccgc aatcgcctcg cgccaagcgg
     3781 caacggcctc ttcgcgtttg ccttgcgcgg caagaatatc gccgcgccgg tccgcataca
     3841 ggcccttaaa tgagtcgggt ggggtatcta acaccgccaa cgcctcgtcg tacttatctt
     3901 gatcgagcaa caagcccgca agccgcagtt tggccactgg cgcaagcgcc acatggttgc
     3961 tgccagctaa ccaacgcagc gggtcttgcg cagcagctaa atcgccgcta tctcgcaacg
     4021 cgtcactggc caccaatgcg gcgcgagcgg cataatcggt ttgcgcaaaa tccttttgca
     4081 atgcttgcat ggccgccaca acgcgcggcg tactgtcctc attgggttcg gctgccgcct
     4141 gctcaagcgc ctcatagtag ccacgggcct gttgtgactg attattctca taccagttcc
     4201 aaccctgcca tccaagcaca atgaccagcg ctaacgacaa taaacccaat gtgatcgtgc
     4261 cgtacttgtc ccaccaggct tttagctggg ctagttgctc ttgttcttct aaatcatagg
     4321 ccatcgtttc aaccctcttt gcttgctgtg gtgtctggtt cagtgggact aggtgcggat
     4381 gcttgtgtga atgccagcgc ttcgttcagg gtgttggcca acgtgccggc caacgcgtca
     4441 aagcccacac gctgttgctg cgcatccgtg gcgctggcac gtaaccattt tacggatgcc
     4501 tggccactgg ttaattcatc ctcgcctagg ataaccgcaa tttgtgcacc gctgctatcg
     4561 gctcgcttga actgggcctt aaagctcgct gcaccggcat gcacaatgac ggacaagccc
     4621 gcatcgcgca tttgctcacc gagcatggcc gcacgtcgct gcgccatctc accctgatgg
     4681 atcacgtaca cctgacattc aggcacagcc gcctgcggct gacattgcag ccatagatca
     4741 agtaagcgct ccataccaat ggcaaaacca acagcaggcg ctggtttacc gccgagcaag
     4801 ctaatcaaat cgtcatagcg cccgcccccg cacacagtgg cttgcgcacc gagcttatca
     4861 gtgacccact cgaatacggt caggttgtag tagtccaaac cgcgcaccat gcgcgggttc
     4921 aaacgataag caatgcctgc ctcatcaagg cgctcacaca cccccgcaaa atgcgccttt
     4981 gactcgtccc ccaaaaaatc aaacaactta ggggccgcgt tggccatgtc ctgcatggcg
     5041 ggatttttgg tgtcaagcac ccgcaaaggg ttggtgtaga gacgacgctg gccatcttca
     5101 tcaagcacgt cacgatgctt ttctaggtgc tcgattaatg cggcacgatg cgcttgacgc
     5161 tctgagagct gcccaagaga attaagctca agggtcatgt cctcaatccc gagcaagcgc
     5221 cacagccgcg ctgtcatcag aatcatttcc gcatcgacat caggcccggc gaacccgagc
     5281 gcttcgacat cgagctgatg gaactgtcgg taacgaccgc gttgcggacg ttcatgtcga
     5341 aacaccggcc ccatgctgta gatgcggcgt gcacgatcgt aaagtaagtt gtgttcaatc
     5401 gctgctcgca ccagaccagc ggtgaactca ggtcgcatgg tcagggactc accgttcaga
     5461 ctgtcgacga aggtgtacat ctctttctcg acaatgtcgg tcacctcacc aataccgcgg
     5521 gtaaacaacc gggtgtgctc cagaatgggc gagcgcatgt tcaggtagcc atattgagcc
     5581 aaccaggtgc gcaactgcgc ctcaagagcc tcccacgcgt gagagacatc gggcaacaca
     5641 tcgttcatgc cgcgaatcgc tgcgactttc ttaaattctg ttgtcatgtt ggattaaacc
     5701 tgcgaattaa acctgcgaat taaccctgct taagacgcct tggttggacg gcagttactg
     5761 ctgcccatag cgtttctcaa tgtagtcttg cacgatggcc tgaaactcct gggcaatacg
     5821 atcacctttt agggtgaccg tgcgctcgcc atcgacatag accggtgcgg ccggcacttc
     5881 accggtgccc ggcaaactga tgccaatatc ggcgtgccgg ctctctcccg ggccgttaac
     5941 cacacagccc atcaccgcca cattcatcga ttcaacgccg ggatactggc tgcgccatat
     6001 cggcatttgc tcacgcaaat aacgctgtat gtcatcagcg agctcctgga acaccgtgct
     6061 cgtggttcgc ccacatcccg ggcaggcgat gaccatgggt gtaaaggcac gcatgcccat
     6121 ggtttgcaaa atctcttgag cgaccaccac ctcgcgacaa cggtcaccgc ctggctcagg
     6181 tgtcagtgaa atccggatgg tgtccccaat gccttcttgc aacagaaccg ccaaggcggc
     6241 tgttgaagcc accacgccct tggtccccat gccggcctcg gttagcccga ggtgtagggg
     6301 gtagtcgcat cgtgcggaca agtcgcgata cacagcaatc agatcttgca catgactgac
     6361 cttgcaagac aacacaatgg catcaccagg cagaccgagt tcctcggcac gctgagcatt
     6421 actgatggct gacaccacca aggcttcgcg cataaccgcc tgagcctcta agggggctgg
     6481 gcgctgactg ttctcatcca tcatgcgcgc aagcaactct tggtccagac tgccccaatt
     6541 gacgccaatg cgcacgggct tgtcatgacg gcatgcaact tcaatcattt gcgcaaaatt
     6601 gtcatcgcgg cgcttgccac cacccatgtt gcccggatta attcggtact tggacaaggt
     6661 agctgcgcac tcgggatact gcgtcagaag cttgtgacca ttgaagtgga agtccccaca
     6721 caacggcact gacacaccca tgcggtcaag ctgctcgcga atcgcgggca cagcctgagc
     6781 ggcctcaggc gtgttaacag taatgcgcac gatctcagaa cccgctagag cgagttcttt
     6841 aacctgaata gcggtggcaa tggcgtcggc cgtgtcggtg ttggtcatcg attgcaccac
     6901 cacaggggca tcgcccccca cgcgtacgac tgtatccccc caagtcaccc gagcctgtcg
     6961 ggtttgacgt cgcggtaagg gacctaccgg tttcacagtg gattcgcgat cttggctcac
     7021 gttctggtta ttcgacatat cgctagacat cccattagcc ttctagccac agaggcaacc
     7081 aaccgtcggg caccatgcca agccagatgg cagcgcccaa caatgccccg atgactacca
     7141 gaacaagcac cacccatccg agagacccag acgagccccc ctcttccacg gactcgccga
     7201 tggctcgcgt ggaggtgtga tcggcaatcc cagctctagt caacggcatg tgctccttga
     7261 gcacaggctc tagtgcttcg aaatccacat caaggaaccg agcgtagctt ttggcaaggg
     7321 tcttcaagcc gatgccttta ggcaactcat cccagcgctc gttttctaag gcatcaatca
     7381 catgaggccg gtatttaatg cgtgcggaga catcatcaag tgacaagcca cgggccacac
     7441 ggatggtgcg cagtgcagca atggccgtca ccggctcgct tggctcgggc ggcgactcaa
     7501 acttcaaagg tacggttttg ggatcgtcca gactcataat cacgccttag tgacagcaat
     7561 actttttaac gcgtgtgccg gtgactgcgc cagacgccgt tgcgtcaatt tggtgcggtc
     7621 tttgatgtca ccagccaact gcccacaggc cgcatcgatg tcatcgccac gtgttttacg
     7681 gatggtcgtc accacgcctg cgtcttgcaa gacgcgtgca aatgtatgca cccgattcga
     7741 cgatgagcgc tgcaagcccg agtcagggaa tggattgaac ggaatcaagt tgattttgca
     7801 aggcacctgg cgcgcaatat ccaccagttc gtgcgcatgc tgcaggtcat cattgacctc
     7861 ttgcaacatc acgtattcaa acgtgatgaa gtcgcgcggg gcgacctcga ggtagcgttc
     7921 gcaagccgcg agcaactcac gcaatgggta tttcttgttc aacggtacca agtggtcacg
     7981 taacgcatcg ttgggggcat gtaacgagac agcaagcgcc acagggcaat ctttgcccaa
     8041 gcgatccatc atcggcacca ccccagaggt cgatacagtg actcgcctgc gggacaaacc
     8101 ataggcatga tcatccagca tcaagcgcaa tgccccgagc acggcgtcat agttcagtaa
     8161 cggctcgccc atgcccatga acaccacgtt gctgaccaca cggtcacaga ccgtgctcga
     8221 gcctgttggg tcgcttagcc ggggtgcagc ccctaatcgg gttacagccc cattggcgag
     8281 caaatcatgg cgtgcccacc aaagctgacc gatgatctcg gcagatgtca gattgcggct
     8341 aaaaccctga tgccccgtcg aacaaaacgg gcacgccacg gtgcagcctg cctgactcga
     8401 aatgcacagt gtgccgcggt catcttccgg gatgaatacg gtttcaatgg cattgttgtt
     8461 gccaacatca aacaaccact tgtgggtatg gtcagatgcc acatggcgct cgagcacgtc
     8521 gggcgccaca atctggcatt ggctggccag gcgcgcgcga aacgcgccag ccaagtcagt
     8581 cattttgctg aaatccgatt caccacgctg atgaacccaa cgcattagtt gcttggcccg
     8641 aaagggctta tccccccagc caccgaccat ctcgacaagt gacgtgtagt ccatgccgat
     8701 caggttggtg tggttcgatg tcgctacttg catgtgttgg ttttaaaggt tcgtcagcgt
     8761 caaaggtggg tgaagatctt gaaagtcgtg aaagtcatta ttcagcgaaa tgcaacgatg
     8821 aaatccaagg cgctttaacg gctgtggatg ttcatttccg ggaaaaagaa cgcaatctca
     8881 ttggctgctg tttcaggtgc atctgaaccg tggacagcgt tggcatcaat gctttcagcg
     8941 aaatcagcac gaatcgtgcc ggcatcggct ttcttggggt ccgtggcacc catcaaatca
     9001 cggttggtct ggatggcgtt ttcgccttcg agcacctgga ccatgacagg acctgaaacc
     9061 ataaagtcaa ccagatcctt gaagaaagga cgctctttgt gcacggcata aaagcgcccg
     9121 gcttcttcag gcgagagctg catcatgcgc gcagcgatga ctttcagacc ggcctgctca
     9181 aagcggccca gaatctgacc aatcacattt ttagccacgg catcgggctt gatgatagac
     9241 aaagtacgtt ctacagacat gaaagctcca gtaattctca atgaaaacaa caacttttag
     9301 aaattcgaga tagcccgtca ttctagcacg ccgcggttac tcgcatgccc ttaaaatagg
     9361 accttgagtg tggctccagg ctaagtacaa cgcctgcgat tgcctatttc aaagcccagg
     9421 cggcaacggt catcgtatta cgctgcacta gagccgagct cgcctggttg ctttggtcgt
     9481 tttggtcgct ttggtcgttt tcatcgtttt gaaccttctg gtcccttttt tacccatact
     9541 ggctttaccc atccatgaca aacaacaccg catctgctgc tgacagccta cctaaaagtt
     9601 ttgaacctgc cgagattgaa agtcgctggt acccaaagtg ggaatcatct ggctacttcc
     9661 aggctggcca gcacgtagag ggtgcaagcc ctgacttacc gccctatgtt atccagttcc
     9721 caccaccgaa tgtcaccggc accttgcaca tgggccatgc ctttaaccag accatcatgg
     9781 acgggctggt gcgttatcac cgcatgcgcg gccaagacac tgtgtttgta cctggcactg
     9841 atcacgccgg tattgctacc cagatcgtgg ttgaacgcca actcgacgcc caaaagctaa
     9901 gccgacacga cctcggtcgc gagaagttca cagaaaaagt ctggcagtgg aaacaggaat
     9961 cgggtggcac catcacagga caagttcgcc gtcttggtgc ctcggctgac tggccacgtg
    10021 agtacttcac catggatgag cgcatgtccg ttggtgtggc agagacattt gtacgcctct
    10081 atgaacaagg actgatttat cgcggcaagc gcctggtgaa ctgggacccc aagctgctaa
    10141 ccgcggtctc cgatctagag gtgcagtcgg tcgaaaccaa aggttcgctc tggcacattt
    10201 gttatccctt tgttgatggc ccacaaatca ttgaacaaga cggtcaaacc gaaaccttgc
    10261 gtggcttgac gattgccacc acccgcccgg aaacgatgct cgccgatggc gcactgtgtg
    10321 tgcatccgga tgaccctcgc taccaacatc tggttggcaa gatggtggac ctgcctttat
    10381 gtgatcgcca gatccccatc attgccgatg atttcgtgga catggatttt ggtactggtg
    10441 ttgtcaaaat aaccggtgcc cacgacttta acgactatgc ctgcgccata
//
LOCUS       DATBNL010000046         3232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_150021, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000046 DATBNL010000000
VERSION     DATBNL010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150021"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1180
                     /gene="trkA"
                     /locus_tag="VIC30_00780"
     CDS             <1..1180
                     /gene="trkA"
                     /locus_tag="VIC30_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEY7802963.1"
                     /translation="MIIACAASDAINLVACKIARQIFNVPRRVARIRSSEIPAMPELL
                     GEEGFCVDAVISPESSVTDYLTKLVEFPEALQVVDMARGKVSVITMRVSLDGFMANHP
                     LKDLRVMNPDVNAKVVDIVRLGRTITISPETILRPGDELLLIADASHAHQAVRQMSQS
                     KEQVRRVMIAGGGNIGARLARNLANAGYNVRIIEQSMDRCEELATTLPDNVLVLHGNG
                     TDESLLERESIEDMDTWMALTSDDEDNIMSSLMAKRMGAHRVIALINRQAYGELMQGS
                     HIDIAISPAQATMSELLRYVRRGDIVAAHRLRGGLSEVLELVAHGDRKSSKVIGKRIA
                     DLTLPKGASIGAVVREQEINVSDPDVTIEADDHVIVFVPSRDQVRQIEKIFQVSASFF
                     "
     gene            1186..2655
                     /locus_tag="VIC30_00785"
     CDS             1186..2655
                     /locus_tag="VIC30_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HEY7802964.1"
                     /translation="MKRLLAVFHVLGFTMVLFATTMFVPMVWSVLLKDGQLMLFVHAF
                     LIALTLGGAMWAGTRRFRAELRPRDGFLLVTLVWSFLPLLGTIPLLLYFHDIGAPLKF
                     SDAYFESMSGLTATGATLLSGLDQLAPTINLWRVTMHWVGGMGIIVLAVAILPLLGVG
                     GHQLFRAETPGPMKEEKLTPRIASTAKALYAIYFGLSVACFLAYRAAGMTWFDAWCHM
                     ASTVALGGFSTHDASFGYFDSPMIEAIAVVFMLLSGINYATHFNAFRLGSVKAYKRCP
                     EAIPFVGIVLGMAVLIGFYLWFMGVYPDIQTALRFAIFNTVSIATTAGFASTDYAAWP
                     LIVPIIMIALGMFSTSSGSTGGGIKMIRAMMLVKQTRQEMVSILHPHAVTPVLLKGRL
                     IPARVLASVLAFMLLYGFSIAVLTALMLLSGADATTAFSSVIACVNNIGPGLGEVGPA
                     DNFLSMNDFQVWILSFAMMIGRLELFTVLVLFSAAFWRK"
     gene            2741..>3232
                     /locus_tag="VIC30_00790"
     CDS             2741..>3232
                     /locus_tag="VIC30_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY7802965.1"
                     /translation="MDPLFFVAYAALGCVAGFAAGLLGIGGGMLLVPFLTALLTAQGL
                     PLELVVHSAIATSMASILFTSMSSVRAHHKRGAVRWDLVASFSPGIVIGGLLAGGAVF
                     AVLKTGWLALIFAVFVGYSAIQMLVNRKPKASRQMPGPLGTGAAGAGIGFLSGLVGAG
                     GGFV"
BASE COUNT          596 a          849 c          922 g          865 t
ORIGIN      
        1 catgatcatt gcctgtgcgg ccagcgacgc catcaatttg gttgcttgca aaatcgcccg
       61 gcaaatcttc aatgtgccgc gtcgggtcgc tcgtattcgt tcttccgaaa taccagccat
      121 gccagaattg ttgggagaag aggggttttg tgttgacgcg gtcatcagcc ctgagtccag
      181 tgtcaccgac tatctcacca aactggtgga gttccccgag gcactccaag tcgtcgacat
      241 ggcgcgcggc aaggtcagtg tcatcaccat gcgggtcagc cttgatggct ttatggccaa
      301 ccatccgtta aaagacttgc gcgtcatgaa ccccgatgtc aacgccaaag tcgtcgatat
      361 tgtgcggtta ggcagaacca tcacgatatc gcccgagacc attttgcgcc cgggcgatga
      421 actgttactg attgccgatg cgagccatgc acaccaagcc gtgcggcaaa tgagtcagtc
      481 taaagaacag gttcgtcgcg tcatgatcgc cggcggtggc aacatcggcg ctcgcttagc
      541 gcgtaacctt gcgaatgccg gctacaacgt gcgcatcatc gagcaaagca tggatcgatg
      601 cgaggaattg gccacgacct tgcctgacaa cgtgctggta ttgcacggca atggcacgga
      661 cgagtcattg cttgagcgcg aaagcatcga agacatggac acctggatgg cgctgactag
      721 cgatgatgag gacaacatca tgtcttcact catggccaag cgcatgggtg cgcatcgagt
      781 cattgccctg attaaccgac aggcctacgg cgaactgatg caaggcagtc acattgacat
      841 cgcgatctcg ccggcgcaag ccaccatgag cgaattgctg cgatacgtgc gccgtggcga
      901 cattgtggcc gcgcatcgct tgcgtggtgg tctttccgag gtacttgagc tcgtggccca
      961 tggtgacagg aagtcctcca aagtcattgg taagcgcatt gcagatctga cattacccaa
     1021 aggggcttcg atcggagcag tggtgcgcga gcaggaaatc aatgtctcag acccggatgt
     1081 gaccatcgag gcagacgatc acgtcattgt gtttgtgcct tctcgagacc aagtgcgtca
     1141 gatcgagaaa atctttcaag tttctgcgtc tttcttctaa gttcaatgaa acgcttgctc
     1201 gccgtctttc atgtgctggg cttcaccatg gtgttgtttg ccacgacgat gttcgtgccc
     1261 atggtctggt cagtgctgct taaagacggt caattgatgc tgtttgtgca tgcgttttta
     1321 attgcgctga ccttgggtgg tgccatgtgg gctggtacac gccggtttcg tgccgaactc
     1381 agaccacgtg acggattttt attggtcaca ctggtctgga gcttcttgcc attgctaggc
     1441 accattcctt tgctacttta tttccatgac attggcgcgc cgctaaagtt tagtgatgcg
     1501 tactttgaat cgatgtcggg cctgactgcc actggtgcaa ccttgctaag cgggctcgat
     1561 caactcgccc cgaccatcaa tttgtggcgt gtcaccatgc actgggtcgg tggcatgggc
     1621 attatcgtgc tggcggtcgc tattttgccg ttgcttggcg ttggcgggca ccagctgttt
     1681 cgggctgaaa cgcctggacc gatgaaagag gagaagctta ccccacgcat tgccagcact
     1741 gcaaaggcgc tttatgcgat ctattttggg ctctcagtgg cctgttttct ggcgtatcga
     1801 gccgctggta tgacctggtt cgacgcctgg tgtcacatgg catccacagt ggcactgggg
     1861 ggtttctcga cgcatgacgc cagctttggc tactttgact caccgatgat cgaagccatc
     1921 gcggtggtct tcatgttgct gtctggcatc aattatgcca ctcacttcaa tgcgtttcgg
     1981 cttggtagcg ttaaagccta taaacgctgt cccgaagcga tcccgtttgt ggggattgtt
     2041 ttaggtatgg cggtgctgat tggtttttac ctttggttca tgggtgtcta tcccgacatc
     2101 cagacagcac ttcgttttgc cattttcaat actgtctcga ttgcaacaac cgcgggcttt
     2161 gccagcaccg actacgccgc ttggccactg attgtgccca tcattatgat cgcgctcggg
     2221 atgtttagca ctagctcagg ctccactggt ggcggcatca agatgatccg cgccatgatg
     2281 ctggtcaaac aaacccgcca ggaaatggtc agtatcctgc acccgcatgc cgtcacacca
     2341 gttttattga aggggcgtct cattccagcc cgggtcttag cctcggtgct ggcgttcatg
     2401 ctgctttatg ggttttctat tgcggttctg accgccctca tgctcttgag cggcgctgat
     2461 gccaccacgg cgtttagttc ggttattgcc tgtgtgaaca acatcggtcc cggactaggc
     2521 gaggttgggc cggcggacaa ctttttaagc atgaatgact tccaagtatg gattctttct
     2581 tttgccatga tgattggtcg tttggagctg ttcaccgttc tcgtgctgtt ttctgcggcc
     2641 ttctggcgta agtaaagcgg gcctaagtag cgcggccgtt ggtgggtgcg ctcggtggtt
     2701 atactgatgc tgcttcctga tttttctggc tgttgacccc atggatcccc tattttttgt
     2761 tgcctacgct gcgctaggct gtgttgccgg ttttgccgct ggtctgcttg gcatcggcgg
     2821 tggcatgcta ctcgtgccgt ttttgaccgc gctgctcacc gcgcaaggct tgcccttgga
     2881 actcgtggtg cattcggcta tcgcaacctc aatggcgtcg attctgttta cgtctatgtc
     2941 tagtgtgcgc gcgcaccaca aacgcggtgc ggtgcgatgg gatctagtgg cgagcttctc
     3001 acctggcatt gtcattggcg gtctgctggc cggcggcgcg gtgtttgctg tcttaaagac
     3061 aggttggttg gctctgatct tcgccgtttt tgtcgggtac tcagccattc aaatgttggt
     3121 taaccgcaaa cccaaggcca gccgacaaat gccaggtcca ttgggcacgg gcgctgctgg
     3181 cgcgggcatt gggtttttat ctgggctcgt tggtgccggt ggcggttttg tg
//
LOCUS       DATBNL010000047         3045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_30448, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000047 DATBNL010000000
VERSION     DATBNL010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30448"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VIC30_00795"
     CDS             complement(<1..591)
                     /locus_tag="VIC30_00795"
                     /inference="COORDINATES: protein motif:HMM:NF024571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7802966.1"
                     /translation="MIPRILQTELETQLNEYPIVTVLGPRQAGKTTLARLTLPNYDYV
                     SLENPDTRQLATEDPSAFLKQYPTHAIFDEIQRAPHLLSYLQGIVDDNKSNGQFVLTS
                     SHQLQLRESVSQSLAGRTGILHLLPLSIAELTHAGIAFDDASAYLFQGFLPRFYDQQQ
                     RPHIAYASYFQNYVERDVRQLIQLKDVVLFEKFMKLL"
     gene            995..1264
                     /locus_tag="VIC30_00800"
     CDS             995..1264
                     /locus_tag="VIC30_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HEY7802967.1"
                     /translation="MMSSADTYVRARIDSGTKNQAAQALEDMGLTISDAIRLLMLRIA
                     TEHRLPFDVKVPNATTRKAIEQLETGRAKKARSVRKLMTQLNADD"
     gene            1337..1534
                     /locus_tag="VIC30_00805"
     CDS             1337..1534
                     /locus_tag="VIC30_00805"
                     /inference="COORDINATES: protein motif:HMM:TIGR02385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HEY7802968.1"
                     /translation="MLGDVLNLLIADKALPPNNKDHSLDGNWLGFRECHVKPDLLLIY
                     KQPEAPILRLARLGSHSELFK"
     gene            complement(1673..2065)
                     /locus_tag="VIC30_00810"
     CDS             complement(1673..2065)
                     /locus_tag="VIC30_00810"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4143 domain-containing protein"
                     /protein_id="HEY7802969.1"
                     /translation="MRDSGVMHALLNISNHDQLLGHPVCGKSWEGFVIETLLNLLPAH
                     VQPFFYRTADGAEIDLLLEIAPNKLWAIEIKASHTPKLERGFHSACEDLPCEEKFVIY
                     AGEQDFPMKNDVIATSLNGMIERLSALS"
     gene            complement(2148..>3045)
                     /locus_tag="VIC30_00815"
     CDS             complement(2148..>3045)
                     /locus_tag="VIC30_00815"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013517124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEY7802970.1"
                     /translation="PELERVTRRYTSEIGIIIGPSKDIPAPDMNTNERVMAWMMDTYS
                     MNQGTTSTGVVTGKPVDLGGSLGRREATGRGVFTVGVQAAQRIGLPIEGATVAVQGMG
                     NVGGVAAKLFCEAGARVTAVQDHGGTLYRESGIDVLALLAHVEAHGSVAGFEGAEVIA
                     NDAFWETPCDILIPAALEGQITQANAHRVQARMIIEGANGPTTPEADDILNERNILVV
                     PDVIANAGGVTVSYFEWVQDFSSFFWTEEEINKRLVDIMKGALDAIWQVSAEHNVSLR
                     TATFIVACKRILHARDMRGLYP"
BASE COUNT          743 a          786 c          802 g          714 t
ORIGIN      
        1 tagcagcttc atgaattttt caaataggac gacatctttg agctgaatga gttgtcgcac
       61 gtcgcgctct acgtaattct gaaagtagga ggcgtaggcg atgtgcggtc gctgttgctg
      121 gtcatagaac ctaggcaaga agccctggaa taggtatgcg cttgcgtcat caaacgcgat
      181 gccggcatgc gtgagttcag caatcgatag aggcagcaaa tgcaagatgc ctgtgcgacc
      241 agcgagcgac tgactcacgg actctctgag ttgcaactgg tgggagctcg tcaggacaaa
      301 ctgcccattg ctcttgttgt catcaacaat gccctgtaga taactcaaca gatgaggggc
      361 gcgctggatt tcatcaaaaa tggcatgtgt cgggtattgc tttagaaaag cgcttgggtc
      421 ttcagtggca agttgccggg tgtctgggtt ttctaggctg acgtagtcgt agttgggcaa
      481 ggtaaggcgg gcaagcgtgg ttttgccggc ttggcgcgga ccaagtacgg tcacaattgg
      541 gtactcgttg agctgggttt cgagctctgt ttgaagtatg cgtggaatca tactgaatag
      601 cagctcttac aaatccagag ttcaactctg gatttgtaaa actgatgatt aacaatgagt
      661 tacgtggata tattcgtggc gtgagcacca ttgcgccgct cactgttgct gaggtgcaca
      721 gaaaggccca aaacctgccc aagcactgcc aagcaatgcg cgcatgctga ccagtccact
      781 aatttttgac gcacgcacga taaagtaaat taagcggcaa ttagtccacc acgttaatta
      841 gcccactgca ttaagcaacg gattaagttg ccaaaattaa aacacttata atattgtcaa
      901 ttagtgtgtt gatcagctta aatctcatgg tctgaatgcg cgtgcgttgt tgtagtcaca
      961 attgaactac aagaagtttg ctaaatggag gcaagtgatg agttctgctg atacgtatgt
     1021 tcgagcccga atcgattcgg gtactaaaaa ccaagccgcc caagcgctcg aggacatggg
     1081 cctaaccatc tcagacgcca ttcgtttact gatgttgcgt atcgccaccg agcatcgctt
     1141 gccgtttgat gtgaaggtgc ccaatgccac cacccgcaaa gcgattgagc aacttgaaac
     1201 gggtagggct aaaaaagcgc ggtcggttcg caaactgatg actcaactga atgcggacga
     1261 ttgaatactc aaatactttt aaaaagacta cgggaagatt aaggcaacac cacgatatcg
     1321 aacagatatc gacgacttgc tcggtgatgt tcttaacctt ttgatcgccg acaaggcgtt
     1381 gccacccaat aacaaagacc actctttgga cggtaattgg ctaggctttc gggaatgtca
     1441 tgtcaaaccg gatttgttat tgatctacaa acagccagag gctcccatcc tgcgcctagc
     1501 ccgcttgggt tcacatagtg agttatttaa gtgagcatgg ttcatacggt attctcagtc
     1561 ctttcggcgc cgctcaacgg gcgcaaaaag gcgagcagtg cagggcaacc acccacaggc
     1621 gcttgtcttg cagagcgcgg gtgattaacg caacacatct caacacattt catcaagaca
     1681 gcgcagacaa acgctcgatc atgccgttta acgaagtagc gatgacatcg tttttcatgg
     1741 ggaaatcttg ttcaccagcg tagatcacaa atttttcttc gcagggcaaa tcttcgcaag
     1801 cgctatggaa cccgcgctcg agttttgggg tgtggcttgc cttgatttca atggcccaaa
     1861 gtttgttcgg cgcgatctcc agtagcagat cgatttcagc gccatcggct gtgcggtaga
     1921 aaaacggttg cacatgggcg ggcagcagat tcagcagcgt ctcaatcaca aatccttccc
     1981 agcttttgcc acaaaccggg tgacccaata gctggtcgtg gtttgaaatg tttaacagcg
     2041 cgtgcatgac accgctgtcg cgcaaccaag tgccaccaac ccccccggcg taaccgtggc
     2101 actagacgat caccactaca gcaaccaccc cagcctgcac cgcgtgatca cggatacaaa
     2161 ccgcgcatgt cacgagcgtg caggatccgt ttgcaggcaa cgataaaggt ggcagttctc
     2221 aggctcacgt tgtgctcggc tgatacctgc cagatggcgt cgagcgcacc cttcatgatg
     2281 tcgaccaagc gcttgttgat ttcttcctcg gtccagaaaa aactcgagaa atcctgcacc
     2341 cattcgaagt agctcaccgt cacaccaccg gcgttggcga tgacatcggg cacgaccaag
     2401 atattgcgtt cgttgaggat gtcgtcggcc tcgggtgtgg tcggcccatt ggcgccttcg
     2461 ataatcatgc gcgcctgaac acggtgggcg ttggcttggg tgatctgtcc ttcaagtgca
     2521 gccggaatca gaatgtcgca aggtgtttcc cagaaagcgt cgttggcgat gacttctgcg
     2581 ccttcaaacc cggccacaga gccatgtgct tcgacgtgcg ccagtagcgc taacacgtcg
     2641 atgcctgact cacgatagag tgtgccgcca tggtcttgaa cagctgtcac tcgagcgccc
     2701 gcctcacaaa acaacttagc ggccacgcca ccgacattgc ccatgccttg cacggcaacg
     2761 gtcgcgcctt caattggtag gccgatacgc tgagcggctt gaacacccac ggtgaacaca
     2821 ccgcggcctg tggcttcgcg tcgaccaagt gagccaccaa ggtcaaccgg tttgcctgta
     2881 accacgcccg tgctggtcgt gccttggttc atagaataag tgtccatcat ccaagccatg
     2941 acacgttcat tggtgttcat gtcaggcgcg gggatgtctt tactggggcc aatgatgata
     3001 ccgatctcac tggtgtagcg acgtgtaacc cgctcgagtt cgggc
//
LOCUS       DATBNL010000048         2832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_150024, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000048 DATBNL010000000
VERSION     DATBNL010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150024"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..2622
                     /locus_tag="VIC30_00820"
     CDS             277..2622
                     /locus_tag="VIC30_00820"
                     /inference="COORDINATES: protein motif:HMM:NF017870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HEY7802971.1"
                     /translation="MRTKSFNFGLITVIALGAVYVGASYYIGVRAEQHIRELVSQAQA
                     QSDKQLVFEQVSTETGLFASSGHWVMQMPQVTLNDDKPVELRVQYNIDHALHWSHLAK
                     FDWSVTPQAALAKTVDDIYPTTPSLTGQGKVDWTGSGGSSIGFPGLDQANIDGHVVSI
                     DDLVGQLSVTDHAFDFKLNLPSVQVQDASKDQSLIIKNLGYEASSPDTRTGSLNGPRT
                     GSRTGSVTAAFVVDRLQLESRDQMPFEVKDYRWQFDLHQHGDVVEIDTQQTARSVLSM
                     GSRIDNLEIGLGMQGLHRSDLVQLGKLLDEIDGDITELDELSRAEFDQAQIDQAQIDE
                     LQNIILGMLARGVTLQIPAIKGELTFMGNASPEMVGLEGFSLSAQILDTATGAGQIST
                     ELESLAVPAMLQAFVPEIEGLKLDLSNRVVDGRSDIEIKHALARYQQQDRVVKNVKFD
                     LSLSGLTPDQLGLVGEILGQANWDWRRLSQVQQTQLQAVLEDAAQHGLRLSVPVAQAT
                     LDVTAKGIDVFKLEGLDVQVKLDDVATGAGQASVALRQLSAQGPEMRDIPQVKQFMLT
                     ADNRVVDGKVDYDMHASVESFEDAALRLGNSSMSMTLSGLWAADMQRLSHLTQAMGQG
                     LSTAQEAELAQIARRAIDEGFAWAVPKLDLMIDDAFDHARVQGSASIHLDGLGQAPLA
                     AFDVARLAQLQAKLSVAGQSPAINGVLAQGQAMGLLTNQGEDLVGQVVFENGQLLVNG
                     KALPAREYVLVANAMVQGALASAATPKSELAPRNKPRRGPD"
     gene            complement(2628..>2832)
                     /locus_tag="VIC30_00825"
     CDS             complement(2628..>2832)
                     /locus_tag="VIC30_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802972.1"
                     /translation="SGYRFVAWLGAQANPQAFKDICPHALPLIEGKDFKAPHVDWKAL
                     YGISSRGGVLVRPDGYVCARISD"
BASE COUNT          677 a          695 c          822 g          638 t
ORIGIN      
        1 catcgaattc gtgccatcct atctagggca atgcaagcat gggccaagcc acgccacaac
       61 ttagacacaa aaacgtgcag cgcgcccgtg catcgtgccc gtgcaatacg cgcctcactg
      121 ttgtgcagtg cgattttttt ggtgcgctgg gctgcgcttg ggtgcgctta atgaattgaa
      181 ggcacttttg tttcggctgc gaccgccttg ccagtgttag gcttagtgct tgttgaacca
      241 accgttaaaa cctctagcaa cctaggcgaa tccgtcatgc gcacaaagtc atttaatttc
      301 gggttaatta ctgtcattgc ccttggtgcg gtctatgttg gtgccagcta ttacatcggc
      361 gtgcgcgccg agcaacacat acgcgagttg gtgtcgcagg cgcaagcgca atcggacaag
      421 caactggtct ttgagcaagt cagcaccgag acgggtttgt tcgcctcatc gggacattgg
      481 gtaatgcaaa tgccgcaagt cacactgaac gacgacaagc ccgtcgagtt gcgtgttcag
      541 tacaacattg atcatgcctt gcactggtcc catctagcga aatttgattg gtcagttacc
      601 ccgcaagcgg cgctggctaa gactgtggat gacatttacc caactacgcc gagcctgacc
      661 gggcagggca aggttgattg gactggctca gggggcagtt cgattggttt cccaggcttg
      721 gaccaagcca acatcgacgg ccacgttgtg agcatcgatg acttggttgg gcagctctcg
      781 gtaactgacc acgcctttga tttcaagctc aatctgccaa gtgttcaagt tcaggacgca
      841 agcaaggatc aaagcctgat tattaaaaac ttaggctatg aggcaagctc gcctgacacc
      901 cgcacaggat cactgaatgg accacgcacg ggatcacgca cgggatcagt tactgcggcg
      961 tttgtcgtag atcgattgca gctagaaagc agagatcaaa tgccattcga ggtcaaagac
     1021 tatcgctggc agtttgactt gcaccagcat ggtgacgtgg ttgagatcga tacccaacag
     1081 accgccagat cggtgctatc catgggcagc agaattgaca acctcgagat cggtcttggc
     1141 atgcaaggct tgcaccgcag cgatttggtg caattgggta agttgcttga tgagatagat
     1201 ggtgacatca ctgagttaga cgaactgagc agggcagagt tcgatcaagc tcaaatcgat
     1261 caagcacaga tcgatgaact acaaaacatc attctgggca tgctggcgcg cggtgtgacc
     1321 ctgcaaatac cggcgatcaa gggtgagctg acgttcatgg gtaatgcaag cccagagatg
     1381 gttgggttag aggggtttag cctatccgcg cagatactcg ataccgcgac gggtgcgggt
     1441 cagatatcga ctgaactgga gtcgctcgcg gtacctgcga tgctgcaagc gtttgtgccg
     1501 gagatagagg gtttaaagct tgatctcagt aaccgtgtgg ttgatggtcg cagtgatatt
     1561 gaaatcaagc acgccttagc gcgttatcaa caacaggatc gagtggtcaa aaacgtcaag
     1621 tttgaccttt cgctctcggg actaacgcca gatcaactgg gtttggtcgg tgagatctta
     1681 ggtcaagcca actgggactg gcgccgcctg agtcaggtcc aacaaaccca actgcaagct
     1741 gtgttggaag acgccgcaca acacggattg cgtttgtcgg tgccggtggc acaggcaacg
     1801 ctggatgtca ctgcaaaggg catcgatgtt tttaagctcg aaggtttaga tgtgcaagtc
     1861 aaacttgatg atgtcgccac gggtgctggc caggcaagtg ttgcactcag gcagctgtca
     1921 gcgcaaggtc ccgagatgcg cgacataccg caggttaagc aattcatgct tacagcagac
     1981 aaccgtgtgg tcgatggcaa ggtcgactat gacatgcacg cttcggttga gtcatttgag
     2041 gatgcagcat tgaggctcgg taattcgtcg atgtcgatga cactctcagg tttgtgggcg
     2101 gctgacatgc aacgcttgtc ccatttgacg caagcgatgg gtcaagggtt aagtactgcg
     2161 caagaggcgg agttagcgca gattgcaaga cgggccatcg atgaaggatt tgcgtgggca
     2221 gtaccaaagc ttgatctcat gattgatgat gcgtttgatc acgcgcgtgt tcaaggcagt
     2281 gcctcaattc acttagatgg cttgggtcaa gcgccgctcg cggcatttga tgtggcgcgc
     2341 ttagcgcaac ttcaagccaa actctctgtc gccggacaaa gcccggcaat aaacggtgtg
     2401 ctggcccaag ggcaggcgat gggattgctc acaaaccaag gcgaggatct ggttggccag
     2461 gtggtgttcg agaatggtca attgctggtt aacggtaaag cgttgccagc acgagaatac
     2521 gtgcttgttg ccaatgcgat ggttcaaggt gcattagcga gcgcagctac acccaagtca
     2581 gagcttgctc cgcgcaacaa gccaagacgt ggtccggatt gatgggccta gtcactgatg
     2641 cgggcgcaga cataaccgtc aggccgcacc aatacgccgc ctcgtgagct aatgccatac
     2701 aaagctttcc agtcgacatg cggtgcctta aagtctttgc cctcaatcaa tggcaaggca
     2761 tgtgggcaga tgtctttgaa tgcctggggg ttggcctggg cgccaagcca agccacaaag
     2821 cgatagccgg ac
//
LOCUS       DATBNL010000049         1788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_110158, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000049 DATBNL010000000
VERSION     DATBNL010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110158"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VIC30_00830"
     CDS             complement(<1..293)
                     /locus_tag="VIC30_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HEY7802973.1"
                     /translation="MLDNLSQRLGRVVKTIRGQARLTEANTQDMMREVRLALLEADVA
                     LPVVKTFIEQVKQKAMGQEVVGSLSPGQALVGVVNDELTNLMGGDLGPEAGELS"
     gene            320..1174
                     /gene="ccsA"
                     /locus_tag="VIC30_00835"
     CDS             320..1174
                     /gene="ccsA"
                     /locus_tag="VIC30_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEY7802974.1"
                     /translation="MSTGIVFHAIAAIIYLGLTTVLWGMLQAGKPMETPERVARWVLL
                     LALVAQAVGLDALVLAGGNLHLSWLLALSVAVWLGLVVFWLESLIVKIDGLLLILLPI
                     AGVVTLFTAIFPGSHLITSAAESALRGHLLLALGAYGLITIAAVQSVLMAALDHHLHH
                     PQDVVDNAGALKRAIGRVLDAQPPLLTQERLLFRIIWIAFGALTLAIISGGLISLATT
                     GKWLPFDHKTVFTVLSWLTFGMLLLGRHLWGWRGRIALRYTLVGFVFVLLSYTGSRFV
                     IEVLLKQG"
     gene            1177..1461
                     /locus_tag="VIC30_00840"
     CDS             1177..1461
                     /locus_tag="VIC30_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP0621 family protein"
                     /protein_id="HEY7802975.1"
                     /translation="MGKILFWAVVIVGVLFLTRLLAHHAANRQSGQGNKNSTNTKQAK
                     SSQTETLGKPEDMVRCASCGVYLPQSDAIKQSEQFWCSEEHAKSGTKTRP"
     gene            1522..>1788
                     /locus_tag="VIC30_00845"
     CDS             1522..>1788
                     /locus_tag="VIC30_00845"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013696582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY7802976.1"
                     /translation="MPDIRHTPSPNTDARPAQTPIDLLVIHNISLPPGEFGTGCAAKL
                     FTNELDFDAHPWFDQIRGLKVSAHFLIERDGQITQFVSCNDRAWQ"
BASE COUNT          372 a          502 c          476 g          438 t
ORIGIN      
        1 gacagctcgc ctgcctcggg gccaagatcg ccacccatca aattcgtcag ttcgtcattg
       61 accactccaa caagggcttg ccccgggctt aagctaccca cgacctcctg gcccatggct
      121 ttttgtttga cctgctcaat aaaggtcttg accacaggca aggccacgtc ggcttcgagc
      181 aacgccaatc gcacctcacg catcatgtct tgcgtattgg cttcggtcag tcgggcttga
      241 ccgcggatgg ttttgacgac gcgccctagg cgctgactga gattatctag cattgggtgt
      301 cttcgcttaa actagaggga tgtctacagg cattgtattt cacgccatcg ctgcgatcat
      361 ctatttaggt ctaacaaccg tcctttgggg catgttacag gccggtaagc ccatggaaac
      421 ccctgagcgc gttgcccgct gggtgcttct tttggcgcta gtggcacaag ccgtggggtt
      481 ggatgcgctg gtactagctg gcggtaacct ccacttaagc tggttactgg cgctatcagt
      541 ggctgtgtgg ctggggctag tggtgttttg gctagagagc ctgattgtga agatcgatgg
      601 cttgctactc atcttattgc cgatcgcagg tgtggtgact ttattcacgg cgatcttccc
      661 gggctcgcat ctcattacca gtgccgcaga gtcagccctg cgcggtcact tgctacttgc
      721 gttgggtgct tacgggctta tcaccattgc cgccgttcag agcgtgctga tggccgcgct
      781 cgatcatcac ctgcaccacc cgcaggatgt ggtcgacaac gccggcgccc tcaagcgcgc
      841 cattggccgt gtgctcgacg cgcagccgcc attgctcacc caagagcgtt tgttattccg
      901 tattatctgg attgcatttg gtgcgctgac actggcaatt atttcaggtg gactgatttc
      961 actggccacc accggcaaat ggctgccgtt tgaccacaaa accgtcttca cagtcttatc
     1021 gtggctgaca tttggcatgt tgctgcttgg gcgtcacctg tggggctggc gtggtcgcat
     1081 tgcgctacgc tatacgttgg tcggatttgt gtttgtgctg ctgtcgtaca ccggcagtcg
     1141 ttttgtcatt gaagtgctac tgaagcaagg ttaagcatgg gcaagatact gttttgggcg
     1201 gtggtcatcg ttggcgttct gtttctgaca cgcctgcttg cacaccacgc cgctaaccgt
     1261 cagtcaggcc aaggcaataa aaattccacg aacaccaaac aagccaagtc cagccaaacc
     1321 gagacactgg gtaaaccgga agacatggtg cgctgtgcaa gctgcggggt ttaccttccg
     1381 caatcagatg ccattaagca aagcgagcaa ttctggtgca gcgaagaaca cgccaaatct
     1441 ggtactaaaa ctcgaccata attcaatcat caagtgaccc ctgccaaccc ccacacagac
     1501 aaggccgatg gttggttaaa cctgccagat atcaggcaca caccatcacc caacacagac
     1561 gcacgcccgg ctcaaacacc gattgatttg ctggtgattc acaacatcag tttgccacca
     1621 ggtgagtttg gcacaggctg cgcggccaag ctctttacca atgaattgga ttttgatgca
     1681 cacccttggt tcgaccagat tcgggggctc aaggtgtcgg cgcactttct catcgagcga
     1741 gacggccaaa tcacgcagtt tgtctcatgc aacgaccgtg cttggcaa
//
LOCUS       DATBNL010000050         3081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_20599, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000050 DATBNL010000000
VERSION     DATBNL010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20599"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..1563
                     /locus_tag="VIC30_00850"
     CDS             193..1563
                     /locus_tag="VIC30_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012839855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY7802977.1"
                     /translation="MSFDKHHTLERLAHALKTGQTTSLALVEQALECIENDEGQGPVA
                     FIRVFADTAREQALASDARRTAGTPRSEIDGLPISVKDLFDIEGCTTRAGSVVLSDCE
                     PATEDAVVVQRLRAAGAIILGTTNMTEFAYSGLGLNPHYGTPLSPWDREHGRIAGGSS
                     SGAAVSVSDGMAVAAVGTDTGGSVRIPAAFCGIVGYKPTAARIDMTGALPLSLNLDSI
                     GPMAHSVVSCAWLASIMAGEPIETPTPCDLAGMTFGVPNELVLDEMDETVSGTFTAAC
                     QALEQAGAKVVSLAMPELLELTELNAAGGFTAAQAWQWHAELLQNQQTQYDPRVAVRI
                     RRGEALDADYVEQLQEKRLDWITRVVKRMQGVDALVMPTVPVVPPLVGPLVSDDEIYA
                     KTNLLALRNPSVINFLDGCAVSLPCHQADQAPVGFMLAAAGGQDARLLSMAAACEAVF
                     AREPSL"
     gene            complement(1612..>3081)
                     /locus_tag="VIC30_00855"
     CDS             complement(1612..>3081)
                     /locus_tag="VIC30_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HEY7802978.1"
                     /translation="VSGREKTLYGIYHKMTEQKKSFSDVLDIYGFRVVVHTLPECYLA
                     LGVLHQLYRPVPGKFKDYVAIPKVNGYQSLHTTLVGPYGTPVEFQFRTREMHNIAEQG
                     VAAHWLYKSDEVSLSEIQKKTHSALQSLLDIQSQTGDSGEFLENVKVDLFPDAVYVFT
                     PDGKIISLPRGATPVDFAYSIHTDIGNHAVACKLNGEYVPLRTELSSGDTIEVITSKA
                     SRPSAHWLNFARTGRARSEIRHYLRTVRYSESVSFGKRLLTQALHEIKLEFPTDDDKT
                     WDKLIRESGAKSREEILADIGLGKRLAAVVARRFAADNPLLETTAAHIDVVSAARAAP
                     ILIQGNEGQAVTLSPCCGPLPGDEIMAGIRVGTGLVVHTADCPVAKRARQREPDRWVK
                     VAWDANHAKHFLARVDVTALNERGVLGMIAGEVAQADSNITNVTMTDDTSEAFVLSMT
                     VQVDDRKHLAKVFRAIRRVPQVRRIVRIKGNHHHHPSAI"
BASE COUNT          674 a          801 c          895 g          711 t
ORIGIN      
        1 cgatagtgac aatagaagca ccaatatgcc accaatggca ctcggcttat gcgctgagaa
       61 cggctctagg ggctgtcttg aagactttga tgaggactgc gatgacacga tagatgacgt
      121 ttcgtaaaca gcgaaagtga gtccccatga tacgcttgtg ccctagaaac atgttgttgt
      181 tcaaggattt ttatgtcgtt tgataaacac cacacattgg agcgtctggc tcacgcgctc
      241 aagacaggtc aaaccacctc gctcgcctta gttgagcaag cgcttgaatg catagagaat
      301 gatgaggggc agggtcccgt ggcgttcatc cgcgtgtttg ccgataccgc tcgcgaacaa
      361 gcacttgcat cggatgcccg acgtaccgct ggcacaccta ggtccgaaat tgatggcttg
      421 cccatctcag ttaaagacct gtttgatatt gagggttgca ccacacgcgc tggatcggtg
      481 gtgctatctg actgcgaacc agccacagaa gatgccgtgg tggttcaacg tctgcgcgct
      541 gcaggcgcga ttatcctggg taccaccaac atgaccgagt ttgcctactc tggccttggt
      601 ttaaacccac attacggcac acccttgtca ccctgggatc gggagcatgg acgtattgct
      661 ggtggctcct caagtggtgc cgcggtctca gtttctgacg gcatggcagt ggctgctgtg
      721 ggtacagaca caggtgggtc agtgcgtatt ccggcagcgt tttgtgggat cgtgggctat
      781 aaaccaacgg cggcgcgtat cgacatgacc ggtgctttgc cgctgtcgct gaatttagac
      841 tccatcggcc ccatggccca tagtgtggtc agttgcgcat ggttggcttc aatcatggcc
      901 ggtgagccta ttgaaacacc cacgccttgc gacttagctg gcatgacctt cggtgttccc
      961 aacgagctcg tgttggacga gatggatgag accgtatcgg gcacctttac ggcagcctgc
     1021 caagcactgg agcaagccgg cgccaaagtg gtgtccttag ccatgccgga gttactcgaa
     1081 ctgaccgaac tcaatgctgc tggtggattt actgcggccc aagcctggca atggcacgct
     1141 gagttactgc aaaatcagca aacgcagtat gacccgcgcg tggcggtgcg catccggcgt
     1201 ggtgaggcat tggatgccga ctatgtcgag cagctacaag aaaagcgtct ggattggatt
     1261 actcgggttg taaagcgcat gcagggcgtc gatgcactgg tgatgccaac tgtgcccgtt
     1321 gtgccgccgt tagtcgggcc cctggtatct gacgatgaga tctacgctaa aaccaatcta
     1381 ctagcactac gtaacccgag cgtgatcaat tttttagatg gctgtgcggt gagcctgcca
     1441 tgccatcagg cagatcaagc gcccgtggga tttatgctgg ccgcagccgg tggccaggat
     1501 gcgcggttgc tgagcatggc tgccgcttgc gaggcagtgt ttgcgcgcga gccgtcgctt
     1561 taaaaaagcc tagagcagaa tctatgggac cgattgtttc gtaggttcag actaaatcgc
     1621 agatgggtgg tggtgatgat tgcccttgat tcgcacgata cggcgcacct gtggcacgcg
     1681 gcgaatggca cgaaacacct tggcgagatg tttgcgatca tcgacttgca cggtcatgct
     1741 taagacaaac gcttcactgg tgtcatcggt catggtgaca ttggtgatgt ttgagtcggc
     1801 ttgggccact tcgccggcaa tcatgcccaa gacacctctc tcgttaagcg ctgtgacgtc
     1861 aacacgggct agaaagtgtt tggcgtgatt ggcatcccac gcaaccttca cccagcgatc
     1921 aggttcacgt tggcgagcgc gtttggcgac cgggcagtca gccgtatgca cgacaagtcc
     1981 cgtgcccacg cggataccag ccataatctc atcgcccggt aagggaccac aacaaggtga
     2041 caacgtgacc gcttgacctt cgttaccctg aatcaagatg ggtgcagcgc gagctgcgct
     2101 caccacatcg atgtgggctg cggtggtttc aagcaaggga ttgtcggccg caaaacgccg
     2161 cgccaccacg gcagccaagc gcttacccaa accgatatca gccaatattt cttcacgcga
     2221 cttggcacca ctttctctga tcagcttgtc ccaggtcttg tcgtcatcgg tcgggaactc
     2281 gagcttgatt tcatgtaagg cttgggtgag caatcgcttg ccaaatgaca ctgactcgga
     2341 atagcgcacg gtgcgcaggt agtgcctgat ctctgatcgg gcgcgaccag tacgggcaaa
     2401 gttaagccag tgcgcgcttg gtctggatgc cttggatgtg atgacctcaa tcgtgtcacc
     2461 gctcgagagt tcggtgcgca gtggcacgta ttcaccgttg agcttgcaag cgacagcatg
     2521 gttaccgatg tcggtgtgta tggaatacgc gaagtcaact ggcgtggccc cgcgcggcaa
     2581 agaaataatc ttgccatcag gcgtgaatac ataaaccgca tcgggaaaca ggtcaacttt
     2641 gacgttttcc aggaactcgc ccgagtcacc ggtctggctt tgaatatcaa gcagggactg
     2701 cagggcagag tgggtttttt tctggatctc ggatagagaa acttcgtcgg acttatagag
     2761 ccagtgtgcc gcaacccctt gttcggcgat gttgtgcatt tcgcgcgtgc gaaactgaaa
     2821 ctcaaccggt gtgccatacg ggcctaccaa ggttgtgtgc aaggactggt agccgttgac
     2881 tttggggatg gcgacgtagt ctttgaactt gcctggcaca gggcgataga gttgatgcaa
     2941 aacacctagc gccaagtagc actcgggtag cgtgtgcacc accacacgaa agccataaat
     3001 gtctaaaaca tctgagaagg acttcttttg ttcggtcatc ttgtgataga tgccgtagag
     3061 ggttttttct cggccagaga c
//
LOCUS       DATBNL010000051         1623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_90326, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000051 DATBNL010000000
VERSION     DATBNL010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90326"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VIC30_00860"
     CDS             <1..223
                     /locus_tag="VIC30_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Sua5 family C-terminal domain-containing
                     protein"
                     /protein_id="HEY7802979.1"
                     /translation="SDPDRVAPSTRVVVISMPVDALAYGQALYATLRELDEMGVASAI
                     VENVPNKPAWAGVRDRLARAAAAFEGDRS"
     gene            complement(248..1438)
                     /locus_tag="VIC30_00865"
     CDS             complement(248..1438)
                     /locus_tag="VIC30_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEY7802980.1"
                     /translation="MSAASFNWSDPLLLDSQLTDEERMVREAAYTYCQEKLAPRVLEA
                     FRHEKMDTSIFPEMGALGLLGATIPAEYGGAGMNYVCYGLIAREVERVDSGYRSMMSV
                     QSSLVMLPINEFGSEEQKRKYLPKLAAGEWIGCFGLTEPDHGSDPAGMETRAVKTSDG
                     YKISGNKMWISNSPVADVFLVWAKCVGGDHDGRIRGFILEKGMAELSAPEIYGKVGLR
                     ASITGEIVMDGVEVGDEQMLPHVTGLKGPFTCLNSARFGIAWGALGAAEACWHTARQY
                     VLDREQFGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVEITSIMKRN
                     SCGKALDVARLARDMLGGNGISDEYGVARHLVNLEVVNTYEGTHDIHALILGRAQTGI
                     QAFF"
BASE COUNT          347 a          438 c          465 g          373 t
ORIGIN      
        1 aagcgaccca gatagggtgg caccctcaac ccgagtggtg gtcattagca tgcctgtcga
       61 tgcgctggct tacggtcagg ccttgtatgc aacgttgcgt gaacttgatg agatgggtgt
      121 ggcgtcggcc atcgttgaga acgtacccaa caagccagca tgggcagggg ttcgtgatcg
      181 actggcaaga gccgcggccg cctttgaagg cgaccgctcg tagagctagg gacaggtcag
      241 tgagtgctta gaaaaacgct tgaatacccg tctgggcacg acccagaatc aatgcgtgga
      301 tatcgtgcgt gccctcatag gtgttaacca cttcaaggtt taccaagtga cgcgccacac
      361 cgtactcgtc tgagatacca ttgccaccaa gcatgtcacg cgctaagcga gccacatcaa
      421 gggccttgcc gcacgaattg cgtttcatga tcgaggtgat ttctaccgca gcggtgcctt
      481 catctttcat gcggcctaaa cgcaggcagc cctgtaggcc gagcgtgatt tctgtttgca
      541 tatcagcgag ttttttctgg atcagttggt tggcagccaa cgggcggccg aactgttcac
      601 gatcgagcac gtactggcga gcggtatgcc agcaggcttc agctgcaccc aaggcgcccc
      661 aagcgatgcc aaagcgtgct gagttcaagc aagtgaaagg tcctttcagg ccagtgacat
      721 gcggcagcat ttgctcatca cccacttcca cgccatccat gacgatttca ccggtgatag
      781 aggcgcgcag gcccaccttg ccgtagattt caggggcgct tagttcagcc ataccttttt
      841 ccaggatgaa gccgcgaata cgaccgtcat ggtcaccacc gacgcacttg gcccagacca
      901 gaaacacatc ggccactggc gagttggaga tccacatctt gttgccggaa atcttgtagc
      961 cgtctgaagt cttaacagcg cgggtttcca tgccagctgg gtctgagcca tggtcgggtt
     1021 cggtcaagcc aaagcaacca atccattcgc ctgcggctaa tttgggcagg tacttgcgct
     1081 tttgttcttc gctgccgaac tcattaattg gcaacatgac caaagacgac tgcacgctca
     1141 tcatggagcg gtagcctgaa tcgacccgct cgacttcgcg cgcgatcaag ccatagcaga
     1201 cgtaattcat gccagcgccg ccgtattcag cagggatggt ggcgcctaac aggcccagtg
     1261 cacccatctc cgggaaaata gaggtgtcca tcttctcgtg gcggaaagcc tcgagcacac
     1321 gaggtgcaag tttttcttgg cagtaggtgt aggcggcttc gcgcaccatg cgctcttcgt
     1381 cggtcagttg gctgtccagt aagagagggt cggaccagtt aaaggatgct gcggacatgt
     1441 tgtgtaactc ctgttgatgt atgtaaagct cgcttgctgt atctgtgatc aggtctcgtg
     1501 cgtcaagcct tagcttggtt agcttggcgc aacttgtcaa tcgtggtggt gggcgtgatg
     1561 gcttgcgggt cggtaatcag atgcaagatg gctggttgct tgctttgaac tgcccgttca
     1621 aac
//
LOCUS       DATBNL010000052         1619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_90329, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000052 DATBNL010000000
VERSION     DATBNL010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90329"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VIC30_00870"
     CDS             <1..510
                     /locus_tag="VIC30_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802981.1"
                     /translation="FIVEHHYSKGCSNTRVYSHGLFRVDSPTLYGVAMWLPPTKVAAQ
                     SVNKDKWQKVLSLTRLACHPDAPKNAASFLMASSIKLIKRDGRFVSLVTYADVRMGHT
                     GAIYKATNWNYVGEMKGSPAWIDPSTGKQVARKSTISRSNKEMLDLGYECVGVFGKHK
                     FIMHLEVNT"
     gene            536..817
                     /locus_tag="VIC30_00875"
     CDS             536..817
                     /locus_tag="VIC30_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802982.1"
                     /translation="MTKNIINLDDHRPHIIAYVACLECAKDWIAIAPADTELFHCPDC
                     DKLSGAVVDPGDAEFINDFMRPAKTKAARIKRTMVVLNAKRMVDEGAFE"
     gene            814..990
                     /locus_tag="VIC30_00880"
     CDS             814..990
                     /locus_tag="VIC30_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802983.1"
                     /translation="MTRWGEIKCPRCAELEAKLAQQDDLVQAANRLAEYLNGNHIYME
                     RVHHLAALVRKGGE"
     gene            1112..1327
                     /locus_tag="VIC30_00885"
     CDS             1112..1327
                     /locus_tag="VIC30_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802984.1"
                     /translation="MVREENQEGILGTNSGEEMTDRRQIADELWAAFKHWEGERKYAL
                     RQIVKHLRIVQADSRSNVAHLVAHHAP"
     gene            1349..>1619
                     /locus_tag="VIC30_00890"
     CDS             1349..>1619
                     /locus_tag="VIC30_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802985.1"
                     /translation="MGVLLQAVGPPGSHKQLKQAEQMDKRVIRKWRKMLVRGLITPSE
                     HMLFRKIMELELENAQLREIVENLRRPAKSVRQVSDQVNEIPAQDL"
BASE COUNT          438 a          403 c          463 g          315 t
ORIGIN      
        1 tttatcgtgg agcatcacta ttcaaaaggt tgctcaaaca cgcgagttta ttctcacggc
       61 ctttttcgtg tggacagccc gaccctctat ggcgttgcaa tgtggctacc gccaaccaag
      121 gttgcagcgc aaagtgtgaa caaggataaa tggcaaaagg ttttgtcgct gacgcggttg
      181 gcatgtcacc ctgatgcacc aaaaaatgca gcgtcctttt tgatggcctc ctctattaaa
      241 ctaatcaagc gagacgggag gttcgtgtct ttagtgactt acgctgatgt ccgcatggga
      301 cacacagggg caatatataa agccaccaac tggaattatg taggggagat gaaagggtcg
      361 ccggcgtgga tagaccccag cacgggcaag caagtagcca gaaagtcaac aatcagccga
      421 tccaataaag agatgcttga tcttgggtat gaatgcgttg gcgtttttgg caagcacaaa
      481 ttcattatgc acttggaggt aaacacatga ctcgcatgtt gcaggagaag aagcaatgac
      541 caagaacatt atcaacctcg acgaccaccg cccgcacata atagcatatg tcgcctgcct
      601 tgagtgcgcc aaggattgga tcgccatcgc gcctgccgac acggagcttt tccactgccc
      661 cgattgcgac aagctttcgg gtgccgtggt cgatcccggc gacgccgagt tcatcaacga
      721 cttcatgcgg ccagccaaaa ccaaagccgc ccgtattaag cgcacgatgg tggtgctcaa
      781 cgcaaagcgc atggtcgatg agggggcgtt cgaatgacca gatggggcga gatcaaatgt
      841 ccgaggtgcg cggaactgga agccaagctg gcccagcaag acgatctggt gcaggcagca
      901 aatcggctgg cggaatatct gaatggcaac cacatctata tggaaagagt gcatcatctt
      961 gccgcgctcg tccgcaaagg gggagagtaa tgcctagata catcatcgag tgcgacgatc
     1021 cgactgacat tgtcttggga atgagggcga tcaagaactt ggtcgaaagt ggggatgacg
     1081 ttgccatact tgagttcgag aaccacagtc tgtggttcgt gaagaaaacc aagaagggat
     1141 actcggcacg aacagcgggg aagaaatgac cgaccgccgc cagatcgcag acgaactgtg
     1201 ggcggcgttc aagcactggg agggtgaacg caagtatgcg ctgcgccaaa tcgtcaagca
     1261 tttgcggatc gtgcaggccg acagcagatc aaatgtagcg catttggtag cgcatcacgc
     1321 cccgtgaaaa ccacctagca cagtgttctt gggtgtgttg ctgcaagctg tcggcccacc
     1381 aggcagtcat aaacaactca agcaggccga gcaaatggac aaacgtgtca tcagaaagtg
     1441 gcgaaagatg ctggtgcgcg gactgataac gcccagcgaa cacatgctgt tccgcaagat
     1501 catggagctc gagctcgaga acgcgcagct cagagagatt gtcgaaaacc tacggaggcc
     1561 agcgaagagc gttcgccagg tcagcgacca ggtgaatgaa atcccggcgc aggatctca
//
LOCUS       DATBNL010000053         5647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_100255, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000053 DATBNL010000000
VERSION     DATBNL010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5647
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100255"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VIC30_00895"
     CDS             complement(<1..383)
                     /locus_tag="VIC30_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY7802986.1"
                     /translation="MAKRDYYEVLGIAKNASDDEIKKAYRKLAMKWHPDRNPDSKEAE
                     DKFKAAKEAYEVLTDPQKRAAYDRFGHAGVDPNAAGGMGGGAGGAAFADAFGDIFGEI
                     FGGARRGGGGGPQVYRGADLKYAMD"
     gene            complement(495..2426)
                     /gene="dnaK"
                     /locus_tag="VIC30_00900"
     CDS             complement(495..2426)
                     /gene="dnaK"
                     /locus_tag="VIC30_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013434203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEY7802987.1"
                     /translation="MSKIIGIDLGTTNSCVAVFEGGQAKIIENAEGTRTTPSIVAYME
                     DGETLVGAPAKRQAVTNPTNTLYAVKRLIGRKFSEDAVKKDVDLMPYKIVKADNGDAW
                     VQAQGKPLAPAQVSADILRKMKKTAEDYLGETVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLEVKRIINEPTAAALAFGMDKSERGDRKIAVYDLGGGTFDISIIEIADVDGEKQFE
                     VLSTNGDTFLGGEDFDQRIIDYVIDEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSS
                     SQQTELNLPYITADASGPKHLNLKITRAKLESLVEDLIARTIEPCRTAIKDAGVKVGD
                     IDDVILVGGMTRMPKVQEKVKEFFGRDPRKDVNPDEAVAAGAAIQGSVLSGDRKDVLL
                     LDVTPLSLGIETLGGVMTKMIEKNTTIPTRFSQTFSTADDNQPAVTIKVFQGEREIAT
                     GNKMLGEFNLEGIPPAPRGMPQIEVTFDIDANGIVHVSAKDKGTGKENKITIKANSGM
                     TEEEIERMVKDAEANAAEDHRMAELAQTRNAADALVHATRKSLTEYGDKVEASEKEAI
                     EQATAALEEALKQNADKAELDSKVEELSKASQKLGEKMYADMQAQAGADATQAEGGDQ
                     AKAADDDVVDADFKEVKRD"
     gene            complement(2565..3170)
                     /gene="grpE"
                     /locus_tag="VIC30_00905"
     CDS             complement(2565..3170)
                     /gene="grpE"
                     /locus_tag="VIC30_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017776948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY7802988.1"
                     /translation="MTANTDAQHPDQPTPENPGDQHPQTDQQPPEGAQTAEGDVVAES
                     QGEQEPAQTLEEALAAAQAQAQDHYENLLRAQAEMENVRRRAQEEVAKARKFGIESFA
                     EGLVPVKDSLEAALSQAEQSAEDMRAGIETTLKQLSGAFERHHLTEIAPAAGEKFDPH
                     HHQAIATVAAEQPANTVVNVLQKGYLIADRVLRPALVTVAS"
     gene            complement(3374..4480)
                     /gene="hemH"
                     /locus_tag="VIC30_00910"
     CDS             complement(3374..4480)
                     /gene="hemH"
                     /locus_tag="VIC30_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEY7802989.1"
                     /translation="MSAAEAPEPKEPRARYWPEPAPTRLKVWPAPCKTGKVGVLLVNL
                     GTPQEPTAGAIRRYLREFLSDPRVIEIPKLLWWPILNGPILLTRPKKLVHRYEGIWME
                     GGSPLLVYTQRQAAGVTERLKARGHEVDVAVGMRYGQPSIRQAMLQLRDAGCEHVLTV
                     PLYPQYSSSTTGTVVDEVTRVASHMRNQPAMRFVKRFHIDPLYINPLADKIGAHWAEH
                     GKPQKLIMSFHGLPQRCTKIGDPYCRDSYETAAALAARLNLSDDEYLVTFQSRFGPAA
                     WLQPYTEPTLEQMAKDGVTSVDVVCPGFVADCLETLEEISIEVRETFMNAGGERFNYI
                     ACLNDDAPWLDTLTDMVERELSGWPTRPEDVPGA"
     gene            complement(4537..5556)
                     /gene="hrcA"
                     /locus_tag="VIC30_00915"
     CDS             complement(4537..5556)
                     /gene="hrcA"
                     /locus_tag="VIC30_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003803319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEY7802990.1"
                     /translation="MDDRAQSLLKALIERYIADGQPVGSRTLSKVFDLSPATIRNVMA
                     DLEEAGLIHSPHTSAGRVPTPKGYRLFVDSMLATQPFELLPAEQIKSMLPTADPTRAV
                     SAAASLLSNMTQFAGVVLAPKRSQVFEHVEFIGLSDKRVLLIIVTPDGDVQNRILFMP
                     REYTSVELTEAGNFFNQHFSGKPFSEVRQSLARELERLRADMSSLMQAAVDAGADSTD
                     DVDSVVISGETRLLDINELASDMQRLRRTFALFEKKTDLLQLLDASSRAQGVQIYIGG
                     ESALVPMEDLSVVTAPYGVNGKVVGTLGVIGPTRMAYERVIPIVDITSRLLSNALSHY
                     SGERH"
BASE COUNT         1193 a         1603 c         1461 g         1390 t
ORIGIN      
        1 tcgtccatgg cgtacttcag gtcagcccct cggtagactt ggggaccgcc gccaccgccg
       61 cgacgtgcac caccaaagat ctccccaaat atgtctccaa aggcatcagc aaatgctgca
      121 ccaccggcac cgccgcccat accaccggcg gcattgggat cgaccccggc gtgtccgaag
      181 cgatcgtaag cggcacgctt ttgtgggtcg gtcaatactt cgtaggcctc tttggcagcc
      241 ttgaatttgt cttcagcctc tttgctgtcc ggattacggt ccgggtgcca cttcatcgcc
      301 agtttgcgat aggctttttt aatctcatca tctgaggcat tcttggcgat gccaagcact
      361 tcgtaataat cgcgttttgc catgattgtg cttcaagggt tgttcgtgac tgcgcccgac
      421 agccctgtaa tcaggctgtc gggcgcttgg gctaaggacg tatatcccgc ctgacagttg
      481 acgttgctat tcgatcagtc acgcttgact tctttgaagt ccgcgtcaac cacatcatcg
      541 tcagcagcct tggcttgatc accgccttcg gcctgagttg catcagcacc ggcttgggct
      601 tgcatgtcgg catacatctt ctcaccaagc ttttgtgagg ccttcgaaag ctcctccacc
      661 ttgctgtcga gttcagcttt gtcagcgttt tgctttaagg cttcctcaag cgcggcggtc
      721 gcttgctcaa tggcttcctt ctcgctggct tcaaccttat caccgtactc agtcaatgac
      781 ttgcgcgtgg catgcaccaa agcgtcagcg gcattgcgag tctgagcaag ctcagccatg
      841 cggtggtctt cggccgcatt ggcttcagcg tccttgacca tgcgctcgat ctcttcttcg
      901 gtcatgcccg agttggcctt aatggtgatc ttgttctctt tacccgtgcc tttgtctttg
      961 gccgagacgt gcacgatgcc gttggcgtca atgtcaaacg tcacttcgat ctgtggcata
     1021 ccacgtggtg ctggcgggat gccctcgaga ttgaactcac caagcatttt gttgcccgtg
     1081 gcaatctcgc gctcaccttg gaacacctta atggtcacag ccggctgatt gtcatcggcc
     1141 gttgagaagg tttgcgagaa gcgtgtcgga atcgtggtgt ttttctcgat catcttggtc
     1201 atcacaccgc caagcgtctc aataccaagc gacaacggtg tcacgtcaag caataacacg
     1261 tcttttcggt cacctgaaag tactgagccc tggatcgccg caccagcagc aaccgcctca
     1321 tcggggttaa cgtccttgcg cgggtcacgt ccgaagaact ctttaacttt ctcttgaacc
     1381 ttgggcatgc gggtcatacc gcccaccaga atcacgtcgt cgatgtcacc gactttgaca
     1441 ccagcgtcct tgatggccgt gcggcaaggt tcgatggtgc gtgcaatcag gtcttcaacc
     1501 agtgattcga gtttggcgcg cgtgatcttt aagttcaagt gcttgggacc agaggcgtct
     1561 gccgtgatgt aaggcaggtt caactcggtt tgctggcttg aggacagctc aatcttggct
     1621 ttttcagcgg cttctttcag gcgctgtagt gccaggacgt ccttggacag atccacgccc
     1681 tgctcttttt tgaactcatc gatcacgtag tcaatgatgc gctggtcgaa gtcctcaccg
     1741 cccaaaaagg tatcaccgtt ggttgaaagc acttcaaact gcttctcacc atcgacgtct
     1801 gcgatttcaa tgatcgaaat atcgaacgta ccaccaccca agtcgtaaac cgcaatcttg
     1861 cgatcaccgc gctcagactt gtccatacca aaggccagtg cagctgcggt tggctcgttg
     1921 atgatgcgct tgacttcaag acccgcaata cgaccggcat ctttggtggc ttgacgctgg
     1981 ctatcgttaa agtaagccgg caccgtgatg accgcctcag tcactgtttc gccgagataa
     2041 tcctcagcgg tttttttcat tttgcgcaaa atgtcggctg acacctgcgc aggcgccaag
     2101 ggcttgccct gagcttgaac ccaagcatcg ccattgtcgg ccttcacaat tttgtagggc
     2161 atgaggtcaa catctttctt gaccgcatct tcactaaact tacgaccaat caaacgcttg
     2221 accgcataca gggtgttggt ggggttggtg accgcctggc gcttagctgg cgcgccgacc
     2281 aaggtctcgc cgtcttccat gtaggcaacg atggaaggcg tcgtgcgggt gccttcggcg
     2341 ttttcaatga ttttggcctg gccaccctcg aacacagcca cacagctgtt cgtggtgcct
     2401 aggtcaatgc caataatttt gctcatgatt tttacctttt ttcagtctgt ctgaagtctt
     2461 taataccgat gcattgaata tggggtgctt ttgggttgtt tcaagggctg gactggaaat
     2521 aaccactcaa agccacttag ttggctactt cgaactagct accatcagct agcgaccgtt
     2581 acgagcgccg ggcgcaatac ccgatcggcg atcaaatagc ccttttgcag cacattgacc
     2641 accgtattgg ccggttgttc agcggcaacc gtggcaatcg cctgatggtg gtgggggtcg
     2701 aatttctcac cagcagccgg tgcaatttcc gttagatgat gccgctcaaa tgcgcctgaa
     2761 agctgcttga gcgttgtttc gatgccagca cgcatatcct cggcgctctg ctcagcttgt
     2821 gacaatgccg cctctaaact gtccttaacc ggcaccagcc cttctgcaaa cgactcaata
     2881 ccgaatttgc gggctttggc cacttcttct tgcgcacgcc ggcgcacgtt ttccatctca
     2941 gcctgggcgc gcaacaggtt ttcataatga tcttgagcct gtgcctgcgc ggctgccaag
     3001 gcctcttcta gtgtctgcgc aggctcttgc tcgccttgcg attcggcaac gacatcacct
     3061 tcggcggttt gggccccctc aggtggctgt tgatctgttt gtgggtgctg atcgcccggg
     3121 ttttctgggg tcggctgatc ggggtgttgt gcgtccgtgt ttgcggtcat tgcatgggct
     3181 ccaaagcgta tcgattgcgt caatgacaag tacatgggga cgctgacatc aaattcaaga
     3241 gggaaaacac aaaatccgct cggtacctaa ggttttctta ttaaaacctt aggcaatatc
     3301 agttgttttg accttaattg cgttggccga cagttcgtct gcctgtgccg cagcgtgaac
     3361 caatgttggg cgcctaggca cccggcacgt cctcgggccg agtcggccag ccagataact
     3421 cgcgctcgac catatcggtc agcgtatcga gccaaggtgc gtcgtcgttt aagcaagcaa
     3481 tgtagttaaa ccgctcacca ccggcattca tgaaggtttc acgcacctca atgctgattt
     3541 cctccagcgt ctccaggcag tcagccacaa agcccggaca gaccacgtca acactggtga
     3601 caccgtcctt ggccatctgc tcaagcgtcg gctcggtata gggctgcaac caagctgccg
     3661 gtccaaaccg actttgaaat gtcactaaat actcgtcatc agacaaattc aggcgtgcag
     3721 ccaatgcggc tgccgtttca tagctgtcgc ggcagtacgg gtcaccgatc ttggtgcacc
     3781 gctgcggcaa accatggaag ctcatgatca gtttttgtgg tttgccatgt tcggcccaat
     3841 gggcgccgat cttgtccgcc aatgggttga tgtagagcgg atcgatatga aaccgcttaa
     3901 caaaccgcat ggccggctgg ttacgcatgt gcgaagccac acgcgtaacc tcgtcaacca
     3961 cagtaccagt ggtgctcgag gaatattgcg gatacagggg caccgttaaa acgtgctcac
     4021 agccagcatc gcgtaactgc aacatggcct gccggatgct tggctgccca tagcgcatgc
     4081 ccaccgccac atcaacctcg tggccgcgtg ctttgagtct ttcagtaaca ccggctgcct
     4141 ggcgctgtgt gtagaccagc aatggcgaac caccctccat ccaaatgcct tcatatcggt
     4201 gcaccagctt tttagggcgc gtgagcaaga taggaccatt cagaatgggc caccatagca
     4261 gtttcggaat ttcaataaca cgtgggtcag ataaaaactc gcgcaggtaa cggcgaatgg
     4321 cgccagcagt tggctcttgt ggcgtgccaa ggttaaccag caagacaccc actttgccgg
     4381 ttttacaagg cgcgggccaa acttttagcc gcgtcggtgc gggttcaggc cagtaacgtg
     4441 cacgtggttc ttttggttcg ggtgcttcgg ctgcagacaa gatatccctc acaatctatt
     4501 caaacaaaaa ctcggccaat gccagatcga ccttctttag tgacgctcac cgctgtaatg
     4561 acttaacgca ttggacaaca atcgggacgt aatgtcgaca atagggatca cgcgctcata
     4621 ggccatacgg gttggaccaa tcaccccaag tgtgcctacc accttgccgt taaccccgta
     4681 gggtgcggtt accactgaca agtcttccat gggcacaagt gccgactcac caccgatata
     4741 aatctgcacg ccttgggcgc ggcttgacgc atcaagcagc tgcaagaggt cggttttttt
     4801 ctcgaacaaa gcaaaggtgc ggcgcaaacg ttgcatatct gaggcgagct cattgatatc
     4861 gagcaaacgt gtctcaccgg aaatcaccac actgtcgaca tcgtccgtac tgtcggcacc
     4921 ggcgtccaca gccgcctgca tcaggctaga catgtcggcg cgcaggcgct cgagctcacg
     4981 cgctagcgac tggcgcacct ctgaaaacgg tttgccagaa aaatgctggt taaaaaagtt
     5041 gcccgcctca gttaactcga cgcttgtgta ctcacgcggc ataaacaaaa tccggttttg
     5101 tacatcgccg tcaggcgtga caatgatcaa cagcacgcgc ttgtctgaca agccaatgaa
     5161 ttcgacatgc tcaaacacct gactgcgctt gggcgcgagc accacaccgg caaactgtgt
     5221 catgtttgac aacaaagacg ctgcagccga cactgcccga gtcgggtcgg ctgttggcaa
     5281 catgctcttg atctgttcgg ctggcagcaa ctcaaatggt tgggtcgcaa gcatgctgtc
     5341 aacaaacagt cggtatcctt tgggcgttgg aacgcgaccc gcagaggtat gcgggctgtg
     5401 aatcaggccg gcctcttcaa gatcggccat gacattgcgt atggtcgcag gcgacaaatc
     5461 aaacacttta gacaaggtgc gtgatccgac gggctgacca tcggcgatgt agcgttcaat
     5521 taacgctttg agcaaagact gggctcggtc gtccatgttg ttggtttttg ccattgaatc
     5581 aaacttataa tcttgagatt aacccacaag tcacggtctg catgcatttt gccactatcg
     5641 cactcat
//
LOCUS       DATBNL010000054         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70337, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000054 DATBNL010000000
VERSION     DATBNL010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70337"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VIC30_00920"
     CDS             complement(<1..724)
                     /locus_tag="VIC30_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEY7802991.1"
                     /translation="METLFLTHPVCRLHDMGQAHPECPERLDAISDQLLSSGIINYIQ
                     SEEVVSPATDEDLTRVHAQAHLDRLAGWLPAEGVHDIDGDTLMNPHTLDAARHAAGGV
                     IQAVDAVMAGQAVNAFCAGRPPGHHASVARAMGFCFFNNIAVGIAHALANHGLSRVAI
                     VDFDVHHGNGTEAIFAGDDRVLMCSYFQYPLFPDCGVHDPAANMCNVPVDAYTRGDHI
                     RELVTEHWLPRLEAHKPEMIFIS"
     gene            734..1849
                     /gene="mltB"
                     /locus_tag="VIC30_00925"
     CDS             734..1849
                     /gene="mltB"
                     /locus_tag="VIC30_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEY7802992.1"
                     /translation="MPKALSYLPILSLLLGLVGCATPSANPVLIKPSASSSASTPAAV
                     RAASTEPVANTGYLSRPAVQAYAQEVAQNRNLPPREVRALLAQAKHLPAAIRLMSPPD
                     PSKPRAPKNWASYRNNFVEPIRINGGKAFMAEHKAALAEAEQRYGVPSNIIAAIIGVE
                     TLYGQYMGNYRVLDAITTLAFDYPDPNRPDRTEMFQNQLADLIELDYQGKVDATRQLG
                     SFAGAMGIPQFMPTSIKLWAVASEPGQQRIDLETDVNDAILSVGNFLKQHGWIAGLPV
                     FAPVQLPAGAGDLVDGGLTPTMDWPELKALGAKLAPGATLGAWSNYPLGVINLPLPQQ
                     DTVQYRTATPNFFALTQYNRSYFYATAVADLAAALVE"
     gene            1940..>2198
                     /locus_tag="VIC30_00930"
     CDS             1940..>2198
                     /locus_tag="VIC30_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019430962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7802993.1"
                     /translation="MKTHDEVIKALMKRSGVKAEVERIEREEGELLDALLRARQEAGL
                     TQAELAARMGTQAPAVARLEKSLATRKHLPSVATLRRYAQAC"
BASE COUNT          515 a          645 c          608 g          430 t
ORIGIN      
        1 ccgagataaa gatcatttcc ggcttatggg cctcaaggcg aggcaaccaa tgctcagtaa
       61 ccagctcccg aatatggtca ccacgggtgt atgcgtcgac tggcacgtta cacatgttgg
      121 ccgcggggtc atgcacgccg cagtcgggaa acaaggggta ctggaagtag ctgcacatca
      181 gcacccgatc atcgccggca aatattgcct cagtgccatt gccgtgatga acatcgaaat
      241 ccacaatcgc cacgcgagac agaccgtgat tggcaagcgc atgggcaatg cccacggcaa
      301 tgttattaaa aaaacaaaac cccatggcgc gcgccactga tgcgtgatga cccggtgggc
      361 gccccgcaca gaacgcgttg acggcttgac cggccatgac cgcatcgact gcctgaatca
      421 cgccgccggc ggcgtggcgc gcggcatcaa gcgtgtgcgg gttcatgagc gtgtcaccat
      481 caatatcgtg aacaccctca gcgggcaacc atcctgccaa tcgatcaaga tgcgcctgcg
      541 catgaacacg ggttaaatct tcatcggtcg ccgggctcac tacctcttca gactgaatgt
      601 agttaataat gccactagaa agtagttggt cggagatggc atcaagccgc tccgggcact
      661 ccgggtgtgc ctgccccatg tcgtgcaaac gacataccgg gtgggtaaga aacagtgtct
      721 ccatgaggtt tatatgccta aggctctaag ttatttgcca atattatctc tcttattagg
      781 gcttgtgggg tgtgcaaccc cgtctgccaa cccggttttg atcaaacctt cagcatctag
      841 cagtgccagc acccccgccg cggtcagggc cgcgagtacc gaacccgtgg ccaacaccgg
      901 ttatttgagt cgcccggcag tacaagccta tgcgcaagaa gtcgcacaaa accgcaacct
      961 gccaccgcgc gaggttcggg cgttactggc acaagccaag cacctgcccg cggccatccg
     1021 gctcatgtcg ccaccagatc catccaagcc aagagcgcca aagaactggg cgagctatcg
     1081 caacaatttt gtagaaccaa tccgcatcaa tggcggcaaa gccttcatgg cagaacataa
     1141 agcggctttg gccgaggcag agcaacgcta tggggtgcca agcaatatca ttgccgccat
     1201 catcggcgtg gagacgcttt acggccagta catgggcaac taccgggtgc tcgatgcgat
     1261 caccaccctg gcttttgact atccagaccc taaccggccc gaccgcaccg agatgtttca
     1321 gaaccaactg gcagacttga tcgaactgga ctatcagggc aaagtcgacg ccacccgtca
     1381 gctcgggtca ttcgctggtg ccatgggcat cccgcaattc atgcctacca gcatcaagtt
     1441 gtgggctgtc gcaagcgaac ccggtcaaca gcgcattgac cttgagaccg atgtcaatga
     1501 cgccatcttg tcagtgggta attttctaaa gcaacatggc tggattgctg gcctgccggt
     1561 gtttgcaccg gttcagttac cagccggggc aggtgatctg gtcgatgggg gtttgacacc
     1621 cacaatggac tggcctgaac tcaaagccct tggcgccaag ctagcgcctg gggccacgct
     1681 cggtgcctgg tcaaactatc cgcttggcgt gattaacttg ccgctgccgc aacaagacac
     1741 cgtgcaatac cgcacggcca cgccaaactt ttttgcgtta acgcagtaca accgcagcta
     1801 cttttacgcc actgcggttg ccgaccttgc agctgcgttg gttgagtgag aattgttgat
     1861 gtagctctga cgcacaatgg aaccttctta tgcagcaacg cgttggacgc ggcgatgagt
     1921 cgcttgaaaa aggttaaaca tgaaaaccca tgacgaagtg atcaaggccc tgatgaagcg
     1981 ctccggcgtg aaggccgagg ttgagcgcat cgagcgtgaa gaaggcgaac tgctcgacgc
     2041 cttgctcagg gccaggcagg aagccggcct gacacaggct gagcttgctg cgcgtatggg
     2101 cacgcaagcg ccggcggttg cccgccttga aaaatcgctg gcaacgcgta agcatttacc
     2161 atcggtggcg accctacgcc gctacgcaca agcgtgta
//
LOCUS       DATBNL010000055         3455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_40475, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000055 DATBNL010000000
VERSION     DATBNL010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40475"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1292
                     /locus_tag="VIC30_00935"
     CDS             48..1292
                     /locus_tag="VIC30_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7802994.1"
                     /translation="MRKSQLLELLSQGQHSGLVFLRDDVSNATLGLQAVALLNCQGGY
                     VLLGVEDDGSVSGIQRPDLERWIMDTVFGRYVHPMVLPFFEQVVCDDGKRVGVISLMP
                     GVAKPYVLRYCDREEIYVRVGSTSKLATREQQARLFESGGLLHAEVLPVNGTSLGDLD
                     QARLADYLVNIAGDLESPATEQDWLQRLTGLGFMTGDNAQPAVCTIAGLVLFGRNPKR
                     YLRHASIRWMSFDGLDMDYRSQDDTFMTGPLVALFEGKIGSGREIIEPGLIERLVDRM
                     LPFISEQSNSIDTSLRRSITSRYPLEALREAILNAAVHRDWTRSIEIGVTNYADRLEV
                     TSPGALQNSMTLDKMFAGQRSPRNPIIMEVMRDYGYVDARGMGVRRKIVPLTREYCGQ
                     DATFELTDDYLKVTIPARTQMP"
     gene            complement(1348..1594)
                     /gene="tnpA"
                     /locus_tag="VIC30_00940"
                     /pseudo
     CDS             complement(1348..1594)
                     /gene="tnpA"
                     /locus_tag="VIC30_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557983.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            1814..2983
                     /locus_tag="VIC30_00945"
     CDS             1814..2983
                     /locus_tag="VIC30_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009666828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7802995.1"
                     /translation="MLNRLIRQQLSETLGHVPAVVLLGPRQVGKTTIAKTIAREVPSV
                     YLDLEAPADLLKLRDPSTFLQAHRDELVILDEIQRAPELFPVLRGLIDQNRERGRRAG
                     HYLLLGSASMDLMRQSSESLAGRLSYLDMTGLSVTEVGAARDAQQTLWVRGGFPDSYL
                     AQTDALAMRWLEDLIRTYLERDVPQMGFRVPAARLRRLWTMLAHLQGETVNLSKLGAN
                     LELDGKAISYYIEILVDLLLVRRLEPWHANVKKRLVKSPRYYIRDSGILHRLLSINDH
                     DALLSNPVLSKSWEGFVLENIHAVLPHGAHTYFYRTAAGAEIDLVVQMPNADVWAIEV
                     KHGVAPKLGKHFNETCQDVGATHKFVVYGGDEAFGVGNDVTVISLARLLDRLMQA"
     gene            complement(3215..>3455)
                     /locus_tag="VIC30_00950"
     CDS             complement(3215..>3455)
                     /locus_tag="VIC30_00950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7802996.1"
                     /translation="DNADHNAGRNIAQRGVSLVLSGEFKPRQTKRVMRMRKKTVGADC
                     SEFTLGEIAVSRGAGNSAVLRSMNQETPTSSAIGG"
BASE COUNT          790 a          831 c          950 g          884 t
ORIGIN      
        1 agatattgat tgggctgcgg ccggaacctg aaagctcata accgaagatg cgcaaatctc
       61 aacttttgga actgctaagt caaggtcagc attcaggctt ggtctttctg cgtgacgatg
      121 tatcaaacgc gaccttgggc ttacaggccg tggccttact taactgtcaa ggtggctacg
      181 ttttacttgg ggttgaagac gacgggtcgg tcagtggcat ccagcgtccg gatctcgagc
      241 gctggatcat ggatacggtg ttcggacgat atgttcatcc aatggttcta ccgttttttg
      301 agcaagttgt ctgtgatgac ggcaagcgag ttggtgtcat ctcattgatg cctggtgtag
      361 ctaagccata tgttcttcgc tattgcgatc gcgaggaaat ctatgtgcgc gttggtagta
      421 catccaaatt ggccactcga gagcagcagg ctcgtttgtt tgagtccggc ggtttgttgc
      481 acgctgaagt cttaccggtt aatggaacct ctttgggtga cttagaccaa gctcgattgg
      541 cagactattt ggtcaatatt gccggcgatt tggaaagtcc ggcaactgag caggattggt
      601 tacaacggct gacagggttg gggttcatga ccggtgataa tgcgcagcca gcggtttgca
      661 caatcgctgg attggtgttg tttggtcgta accctaagcg atatttgcgg cacgcgtcaa
      721 ttcgatggat gtcgtttgac ggacttgata tggactatcg gtctcaggac gacacattca
      781 tgacagggcc gttggtggca ttgtttgagg gcaagatcgg tagtggcaga gaaataatag
      841 agcctggatt aattgaacgg ctcgtagatc gtatgctgcc tttcatcagt gagcaaagca
      901 attccatcga tacgagtttg cggcgttcca taacatcacg ctaccctttg gaggctctcc
      961 gagaagctat attgaacgct gctgtccatc gtgattggac aagatcaatt gaaattggag
     1021 tcacaaatta tgcagaccgg ttggaggtca ctagccccgg tgcattacaa aactccatga
     1081 cgctagataa gatgttcgcc ggacagcgat cgcctcgaaa cccgatcatc atggaggtga
     1141 tgcgcgatta tggctacgtg gatgcaagag gtatgggcgt tcgcagaaaa atcgtgccac
     1201 tgacacggga gtattgcggg caagatgcca cattcgaatt gaccgatgac tatttaaaag
     1261 taactattcc cgctaggaca cagatgccgt agtgatcaac agatgaccat cacgctaagc
     1321 cccgccgttc agggcgggga caaacggtca ttcaggtcgg ttctgttctt gaatgtagcg
     1381 ctttagtact tcaattggaa cccaacctgt gctgctagag aagtagctat gggctccata
     1441 gcaagtttgt tgatttggcc acagaccaga acgattcaat ttcagggaac tgttctttca
     1501 gtcgtctgct agataccccc ttcaaactgt tcaccatcgc cgaaatgctg tgcttcggtg
     1561 ggtatgagat gagcaaatgc acgtgatctt gctcagttag tgattgaatc tgccgctgtg
     1621 gaggcgagag cctgcaaagc atcggtaaat aaggcgcaag ccgaggtcgg gtcagacctt
     1681 cctgcagagg gaatccttgc tcgttagggc gaggaggtga tcaagatgtg cgcaaaaaga
     1741 tctgcacgat aaatattgcg ttaaattaca atataccttg taaattcgga ttttaaaacc
     1801 taaaatacaa ggtatgttaa atcgacttat tcgtcagcaa ttgtcagaaa cgctcggcca
     1861 cgtgcccgca gtcgtgttgc tcggcccgcg ccaggtgggt aaaacgacaa tcgctaaaac
     1921 cattgctcga gaagttccat cggtgtacct tgaccttgag gcgccagcgg atctgcttaa
     1981 gcttcgagat ccttcaacct ttttgcaggc acatcgcgat gagctcgtca ttctcgatga
     2041 aattcaacgt gccccagaat tgtttcctgt cttgcgcggc ctaatcgatc aaaaccgaga
     2101 acgaggccgc cgggcgggtc actatctatt gttgggatca gcctcgatgg atctgatgcg
     2161 tcaatcgtca gagagtctag ccgggcggct tagctatctc gatatgacgg gtttaagtgt
     2221 gactgaagtt ggtgctgcac gcgacgcgca gcaaacactc tgggtgcgtg gtggatttcc
     2281 ggacagttac ttggctcaaa ccgacgcgct cgccatgcgc tggctagagg atttgattcg
     2341 cacctacctc gaacgtgatg tgccgcaaat gggattcaga gtgccggcag ctcgtttgcg
     2401 tcgactatgg acgatgcttg cacacttaca gggcgagacc gtcaatttat ccaagctcgg
     2461 agccaacctt gagctcgatg gcaaggcaat cagctactac atcgagatct tagtcgactt
     2521 gcttttggtg cgtcgtttgg agccgtggca cgccaacgtt aaaaaacgac tagtgaagtc
     2581 ccctcgttac tacatccgcg atagcggtat cttgcaccgg ttgctgtcaa ttaatgatca
     2641 cgatgccttg ttatcgaacc ccgtgctcag caaaagctgg gaaggcttcg tactggaaaa
     2701 tatccatgcg gtattgccgc atggtgctca cacctatttt tatcgcaccg cagccggcgc
     2761 tgagatagat ctggtggtgc agatgcctaa cgccgatgtc tgggcgattg aagtcaagca
     2821 tggcgtggcg cctaagttgg gtaaacattt caatgaaact tgccaggatg ttggcgcgac
     2881 tcacaaattt gttgtctacg gtggcgatga ggcgtttggt gtaggcaatg atgtcaccgt
     2941 tatttcgctg gcacggttgc ttgaccggtt gatgcaagct tgatgcgctt gaggtcgcaa
     3001 agttgtgggt agcgagctta taggctaggt tccgttgccg ctcgtcatgt cgaaccttgg
     3061 gtacgcaaac gctccttgca gaagttcgca gtcgcgcgct gatacaccct gtgtgcaggt
     3121 tggcaccgag cgtgtttagc gactgctcca ccgcataagg cggcttcaca aacagcaggt
     3181 ttctggcaac catggcgtat gacactcccc ccacctaacc gcctatggcg cttgaggtgg
     3241 gggtttcttg gttcatcgat ctgagcaccg cactgtttcc agcgccgcga cttaccgcga
     3301 tctccccaag cgtgaattcg gagcagtccg cccctactgt tttcttgcgc atccgcatca
     3361 cgcgttttgt ctgcctcggc ttgaattcgc ccgagagaac caaactcacg ccacgctgag
     3421 caatattgcg ccccgcgttg tgatcggcgt tgtct
//
LOCUS       DATBNL010000056         4183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_90420, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000056 DATBNL010000000
VERSION     DATBNL010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90420"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2354)
                     /locus_tag="VIC30_00955"
     CDS             complement(<1..2354)
                     /locus_tag="VIC30_00955"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEY7802997.1"
                     /translation="MSSQIEALQNSYLFGGNAPYVEELYESYLNNPSAVPENWRNYFD
                     QLQHLPATDGQEQTRDLPHAPIVESFAQRARQGSSFMGAQSVDLTVASKQVHVQTLIA
                     AYRSLGSRWENLDPLNLQERDDIPELDPGFYGLTELDMDQEFSATNTYFTSDSTMTLR
                     QIVHALKQTYCRSIGAEFMHCSDPVVKRWIQERLESTRSAPVLPNEVKRNVLQQLTEA
                     EGLERFLHTKYVGQKRFSLEGGESFIASMDELVNHAGQSGIQEIVVGMAHRGRLNVLV
                     NIMGKMPGDLFAEFEGKHAEGLSDGDVKYHNGFSSDLSTRGGPVRLSLAFNPSHLEIV
                     NPVVEGSVRARQERRGDEQGKQVLGVLVHGDAAFAGQGVVMETLNLAMTRGYGTGGTV
                     HLVINNQIGFTTSDPRDSRSTIYCTDVVKMIEAPVFHVNGDDPEAVVFATQLALDYRM
                     TFGGDVVVDIVCYRKLGHNEQDTPSLTQPLMYKRIGQHPGTRKIYADKLTAQGVLAEG
                     EGDAMVKAYRQYMEDGQRTIEPVLTDYKSKYAIDWSPYLGAKWTDQADTGVPLAELKR
                     IGERITTLPDGFTPHPLVNKLLNDRRAMARGDLNLDWGMGEHLAFATLVASGYAVRIT
                     GQDSGRGTFTHRHSVLHDQNRARWNDGTFIPLQNVVEGQAPFTVIDSVLSEEAVLAFE
                     YGYSCADPNTLTIWEAQFGDFVNGAQVVIDQFIVSGEAKWGRQSGLTLMLPHGYEGQG
                     PEHSSARIERFLQLCADNNIQVVQPTSAAQIFHLLRRQMIRQFR"
     gene            2724..>4183
                     /locus_tag="VIC30_00960"
     CDS             2724..>4183
                     /locus_tag="VIC30_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEY7802998.1"
                     /translation="MNHDLTQLALDYHAQPRPGKISVTPTKPLSNQFDLSLAYSPGVA
                     AACMAIHGEGDDAAAKYTSRSNLVGVITNGTAVLGLGNIGALAAKPVMEGKGCLFKKF
                     ANIDVFDIELNETDPEKLVDIIAALEPTLGGINLEDIKAPECFYIEKQLRERLKIPVF
                     HDDQHGTAIISSAAILNGLTLVNKPLSEVKLVCSGAGAAAIACLDLLVHLGLQKDNIV
                     VCDSRGVIWQGRDEHMEANKARYARQTDMRTLADACKNADVFLGCSTKDVLSADMVKS
                     MGPQPLILALANPDPEIRPELAKEARPDCIIATGRSDFPNQVNNVLCFPFIFRGALDC
                     GATRITEEMKLACVKAIADLAQAEQSDEVAQAYQGQDLSFGPEYIIPKPFDPRLIVTI
                     APAVAQAAAESGVALRPIEDIEAYKQRLLSQVYHSGQIMRPVFHQARENPKRVLFADG
                     EDERVLRAAQTAIDEKIAHPILIGRPAVVNMRIGKMA"
BASE COUNT         1009 a         1181 c         1077 g          916 t
ORIGIN      
        1 tttctgaact gacgaatcat ctgccgacgc agcaaatgga aaatctgtgc ggctgaggtc
       61 ggttgcacca cttggatatt gttatcagcg cacagttgca agaagcgctc aatccgtgcc
      121 gacgagtgct cagggccttg gccctcgtag ccatgcggca acatcaatgt caggccggac
      181 tggcgacccc acttggcctc gcccgacacg atgaactggt caatcacaac ctgagcacca
      241 ttgacgaagt caccaaactg cgcctcccaa atggtcagcg tgttgggatc agcacatgaa
      301 tagccgtact cgaaagcaag caccgcttct tctgaaagca ccgagtcgat caccgtgaac
      361 ggtgcctgac cctccaccac gttttgcagt ggaatgaagg tgccatcgtt ccagcgagca
      421 cggttttgat cgtgcaagac tgagtggcgg tgcgtaaacg tgccacgccc tgagtcttgc
      481 ccggtaatgc gcaccgcata gcctgaagcc accagtgtgg caaaggccaa gtgctcaccc
      541 atgccccagt caagattcag gtcgccacgc gccatggcac gacggtcatt gaggagctta
      601 ttaaccagcg ggtgcggcgt aaaaccatcg ggcaacgtgg tgatacgctc accaatgcgt
      661 ttgagttctg ccagaggcac accagtatct gcctggtctg tccacttcgc gcccaggtag
      721 ggtgaccagt caatggcgta cttgctctta tagtcagtaa gtacaggctc aatggtgcgc
      781 tgaccatctt ccatgtactg acgatatgcc ttgaccatgg catcgccttc accctcggcg
      841 agcacacctt gagctgtcag cttatcggca taaatcttgc gggtgccagg gtgctgacca
      901 atacgcttgt acatcagcgg ttgggtcaga gacggcgtgt cctgttcgtt gtgaccaagt
      961 ttgcggtagc aaacaatatc gaccaccacg tcaccgccaa aggtcatccg gtaatcaagc
     1021 gcgagttgtg tagcaaacac caccgcttcg ggatcatcac cgttgacatg aaacacaggt
     1081 gcctcaatca tcttgaccac atcggtgcag tagatggtcg agcgcgagtc gcgtggatcc
     1141 gaggtcgtaa agccaatttg gttattgatc acgaggtgaa ccgtgccacc tgtgccgtat
     1201 cctcgtgtca tggctaggtt cagcgtttcc atcaccacgc cctggccggc aaatgcggcg
     1261 tcaccgtgca ccaacacgcc caagacctgt ttaccctgct cgtcgccacg acgctcttga
     1321 cgagcacgca cactgccttc gaccactggg ttcacaatct caaggtgtga cgggttaaag
     1381 gccagcgaca ggcgtaccgg gccaccgcgg gttgaaagat cgctggagaa accgttgtgg
     1441 tacttcacgt ctccatcgct cagcccttca gcgtgcttgc cttcaaactc agcaaacaaa
     1501 tcaccaggca tcttacccat gatgttgacc aaaacgttca gtcggcctcg gtgggccatg
     1561 cccaccacga tttcctgaat gccagactga cccgcgtgat tgaccagttc atccatggaa
     1621 gcaataaagc tctcgccacc ttcaagtgag aaacgctttt gtccaacata cttggtgtgc
     1681 aagaagcgct caagaccctc ggcttcggtt aactgttgca aaacgttgcg cttgacttca
     1741 ttaggtaaca ccggtgcact gcgtgtggat tcgagtcgct cctgaatcca gcgtttgacc
     1801 acaggatccg agcagtgcat gaactcagca ccaatcgagc gacagtaggt ctgcttgagc
     1861 gcatgcacga tctgacgcag cgtcattgtg ctatcagagg tgaagtaggt gttggttgca
     1921 gagaactcct gatccatatc gagctcggtc aagccataga accccggatc tagttcagga
     1981 atgtcgtcgc gctcttgaag attcagcgga tcaaggtttt cccatcgcga cccaagcgag
     2041 cgatacgctg cgatcagcgt ttgcacatgc acctgcttgg atgcaacggt caggtcaacg
     2101 gactgagcac ccatgaacga cgagccctga cgggctcgtt gtgcaaatga ttctacgatg
     2161 ggcgcatgcg gcaggtcacg ggtttgttcc tggccatctg tggcaggcaa atgctgaagc
     2221 tggtcgaaat aatttcgcca gttttctggg accgcgctag gattattgag gtaagactcg
     2281 tagagttctt cgacgtacgg cgcattgccg ccaaacaagt atgagttttg tagtgcttcg
     2341 atttgcgagg acattgacgc ttcacctaac cgggtgcttc acccgaaacg atgcaggaaa
     2401 ccttccgctt agtcggccaa accggtctgc ggatagcggg acgaaaggca gcttgatagc
     2461 cttgagagcc attggcaaag tgtaacgcaa gcggatgcta aaggcgcatc tgtattgaat
     2521 atttttcaat tttttaacag aaggcatgct gcaccgcggc atcgaaatcg ccaaatcgct
     2581 gccccacgca agcctgcaaa acgttaatct ttgcaaacaa gatcacgacc gcgcatgtcg
     2641 cggcatgtcg cctttaaccg tcgcaattgc ctagatttaa gccaacaccc tacgggtacg
     2701 aactcaaaca aaagagacac accatgaatc acgatttaac tcaactcgct ctggactacc
     2761 atgcacagcc gcgtcccggc aaaatctcag tcaccccaac caagccgctt tcaaaccagt
     2821 ttgacctgtc gcttgcctac tcccctggtg tggccgcggc ctgcatggcc attcatggcg
     2881 aaggtgatga tgcggcagca aaatacacct caagatcgaa cctggttggt gtcattacca
     2941 atggcaccgc agtgttgggt ttaggcaaca ttggcgctct tgcggccaag ccagtcatgg
     3001 aaggcaaagg atgtttattt aagaaattcg ccaatattga tgtctttgac atcgagttaa
     3061 acgaaaccga tccagaaaaa ctggtcgaca tcattgccgc actcgagcca actttaggcg
     3121 gcatcaacct cgaggacatt aaagcccccg aatgcttcta tatcgaaaag caactacgcg
     3181 aacgcctaaa gattccagtt ttccatgatg atcagcatgg cactgccatt atttcatcag
     3241 cagccattct caatgggctg acgctcgtta acaaacccct gtctgaagtc aagctggttt
     3301 gctcaggcgc aggggccgcc gccatcgcgt gtttagactt attggtgcac cttggcctgc
     3361 aaaaagacaa cattgtggtg tgcgactcac gcggcgtgat ttggcaaggt cgcgacgagc
     3421 acatggaggc caataaggcc cgctatgcgc gccagaccga tatgcgtact ctggcagatg
     3481 cgtgcaaaaa cgccgatgtg tttctgggct gctccaccaa agatgtgctc agcgccgata
     3541 tggtcaagtc catgggccca caaccgttga tcctggcgtt agccaatcct gacccagaaa
     3601 tccgccctga gctagccaaa gaggcacggc ctgattgcat tatcgctacc ggacgttcag
     3661 acttcccaaa tcaggttaac aacgtattgt gctttccgtt cattttccgt ggtgcgctcg
     3721 actgcggcgc cacacgtatc acggaggaaa tgaaactggc ctgcgtcaaa gcgatcgctg
     3781 accttgcgca agcagaacaa agcgatgaag tcgctcaagc ctatcaaggg caagacctga
     3841 gctttggacc tgaatacatt attccgaaac cgttcgatcc gcgcctgatc gttaccattg
     3901 caccggcggt ggctcaagca gcagccgaat ctggcgtggc acttcgaccc atcgaagata
     3961 tagaagccta caagcagcgt ttgctctcgc aggtctacca ctctggccaa atcatgcgtc
     4021 cggtgtttca tcaggcccgc gaaaacccaa agcgtgtgct gtttgccgat ggtgaagacg
     4081 agcgcgtgct cagagctgcg caaaccgcca tcgacgaaaa aatcgcccac cctatcctga
     4141 ttggtcgccc tgctgtggtg aacatgcgca tcggaaaaat ggc
//
LOCUS       DATBNL010000057         2041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_140211, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000057 DATBNL010000000
VERSION     DATBNL010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140211"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VIC30_00965"
     CDS             complement(<1..557)
                     /locus_tag="VIC30_00965"
                     /inference="COORDINATES: protein motif:HMM:NF014345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HEY7802999.1"
                     /translation="MKRLFKLATGVAIVSATLGGPAALACTGGALTAKDGSTVVGRTL
                     EFGTSLNSQLVVWPKGSSFTGTTPSGDNGIKFESKYGFIGATVDKNYDMIVDGLNEKG
                     LNAGLFYFPGYADYTKATPENTSKGISPAQFVAWVLANFATVDEVKANIDKIAVLPVT
                     LDLLKEVPDVHFKIQDATGKAITIEP"
     gene            714..1880
                     /locus_tag="VIC30_00970"
     CDS             714..1880
                     /locus_tag="VIC30_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008247348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEY7803000.1"
                     /translation="MRIVEIREKTVPISSSIRNAYIDFSKMTISLVAVITDVIRDGKP
                     VVGYGFNSNGRYGQGMLMRERFIPRVLEADPDALLDDSGNNLDPHKIWNAMYTNEKPG
                     GHGERSVAIGTIDMAVWDAVAKIEGKPLFQLLADRYGDGTVNRRVFVYAAGGYYYPGQ
                     DHGKLKDEMRSYIDRGYTVVKKKIGGASLDEDLRRIDSILSILQDGQKLAVDANGRFD
                     LDTAIAYAKALSQYDLFWYEEAGDPLDFELQATLRNYYANPMATGENLFSMQDARNLI
                     RYGGMRADRDWLQFDCALSYGLVEYLRTLDMLKEHGWSAKRCIPHGGHQMSLNIAAGL
                     GLGGNESYPDLFQPYGGFPDGVKVENGHVTMPDLPGIGFEGKSDLISQMRAISD"
BASE COUNT          484 a          491 c          573 g          493 t
ORIGIN      
        1 ggctcgatgg tgatggcttt gcccgtagca tcctgtattt tgaaatgcac atcagggact
       61 tctttgagca aatctaatgt gacgggcaag acggcgatct tgtcgatgtt ggctttgacc
      121 tcatcaaccg tggcaaagtt ggctaggacc cacgcgacga actgcgctgg agagatacct
      181 ttggaggtgt tttctggtgt ggccttggtg taatccgcgt agccgggaaa gtaaaaaaga
      241 cccgcattga gtcctttttc atttaggcca tcgacgatca tgtcgtagtt tttgtcgact
      301 gtggcaccga taaatccgta tttggattca aactttatgc cgttgtcgcc tgacggggtt
      361 gtgcctgtaa atgatgaacc tttgggccag acaaccagtt gtgaattcag agaagtgcca
      421 aattcgagcg tacggccaac aaccgtgctg ccgtctttgg cggtcaatgc gccgccggtg
      481 cacgccaatg ctgctgggcc acctaacgtg gcgcttacaa ttgcaacacc agtagcgagt
      541 ttaaagagac gtttcatgtg tggggttctc caaaggtgag ggtcgtgctg acccggtttg
      601 atgagccttt gggtgccaaa tacagagacg agctctttga cccaagacca gaaagtagtt
      661 ctgtcagggt acagcaactt tattaatcaa gaaaccatgc agaggcagca ccagtgagaa
      721 tcgttgaaat ccgtgagaaa accgtcccca tcagctcgtc catacgcaac gcgtacatcg
      781 acttcagcaa aatgaccatc agcttagtgg cggtcatcac cgatgtgatc cgagatggta
      841 agccagtggt cggttatggc tttaactcca atggtcggta cggacaaggc atgttgatgc
      901 gcgagcgttt tataccgcgg gtgttagagg ctgatccaga cgcattgctc gacgacagtg
      961 gcaacaatct ggacccccac aagatctgga acgccatgta caccaatgaa aagcctggcg
     1021 gccatggtga gcgatccgtg gccatcggca ccatcgacat ggcggtttgg gacgcggtgg
     1081 ccaagataga gggcaaacca ctgtttcaac tgctcgctga ccgttacggt gacggcaccg
     1141 tcaatcgacg cgtgtttgtc tacgctgcgg gcggttatta ctacccgggc caagaccacg
     1201 gcaagctcaa agacgagatg cgcagctaca ttgaccgcgg ctataccgtg gttaaaaaga
     1261 aaatcggtgg tgcttcgctt gatgaagatt tgcgtcgcat cgactcgatt ctaagcatct
     1321 tgcaagatgg acagaagttg gcagtggatg ccaatggccg ttttgatctc gataccgcga
     1381 ttgcgtatgc caaggcgttg tcacagtacg acctgttttg gtatgaagaa gctggtgatc
     1441 cgctggactt tgagttgcaa gccacgctca gaaattacta cgccaatccc atggccactg
     1501 gtgagaacct gttttccatg caggatgccc gtaacttgat ccgctatggt ggcatgcgag
     1561 ctgaccgcga ttggctgcag tttgactgtg cactaagtta tggattggtt gaatacctga
     1621 gaacgctaga catgctcaaa gagcatggct ggtctgccaa acgctgtatt ccccatggcg
     1681 ggcatcagat gtcgctaaac attgccgcag gcttgggatt aggcggcaac gagtcttacc
     1741 cagatttgtt ccagccctat ggcggctttc cagatggcgt gaaagtcgaa aacggtcatg
     1801 tcaccatgcc tgatttgccc ggtatcgggt ttgaaggtaa gtcggatttg atcagccaga
     1861 tgcgggcgat ttctgattaa acaggactac cgaagctgat caaacagcca ttgtgtgaaa
     1921 gtctgccaag gcatggcggt gtgtccgcct ggcagcgctt ttattgtctc ggtctggcaa
     1981 accaacgtac cgtgtttggc agcgtcttga ccggcgagct caataaagcg gttaagagga
     2041 c
//
LOCUS       DATBNL010000058         2405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_769, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000058 DATBNL010000000
VERSION     DATBNL010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..1162
                     /locus_tag="VIC30_00975"
     CDS             2..1162
                     /locus_tag="VIC30_00975"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009524005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7803001.1"
                     /translation="MLRNKTLQTLPLEGVRVIELCNVAAGPFCAMLLADMGADLIKVE
                     NPKGGDTLRSWPPISDGYSENFASLNRNKRSVTLDLKSPEDLERFKRLIKTADVLIEN
                     NRPGVMDRLGIGFDVLKALQPKLVMASISAYGQTGPRAAEGGFDLTVQAMSGLMSVTG
                     EPGGAPVKCGVPVADFSAGLYAAYAVVCALRNAEASGQGTHIDVPMLGATLGIAALQT
                     SEYFGSGKDPVKLGSAHPRNAPYQAFQCRDGYFGMAAGNNALWQAVCDVVEQPQWRDD
                     ERFQTPTLRAQHQTVLREMLEAIFMQDDASVWLERFRAAGVPCAPINTYAEVLADEQV
                     AHMQWVKSLTLPNGVQTKTFGSPVQFDGQSTPIRRAPPALGEHNDDVIGELP"
     gene            1159..1881
                     /locus_tag="VIC30_00980"
     CDS             1159..1881
                     /locus_tag="VIC30_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006225532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY7803002.1"
                     /translation="MSVPVVVDKQVDYWAVTLNRPDKRNALSGELVEGLIEVVEQAQA
                     EKPALLVLRGEGKNFSAGFDFTDWQEASEGDLLWRFVRIEQLLQMLQALPVLTLALAH
                     GKNFGAGVDLMAVCKHRVASDDATFRMPGLKFGLVLGTRRLARLVGVQTTRQIQQVAK
                     TLNASEAHTTGLVSALAEPEAWPHVIKQQGDIATSLTPSARASLYRVLDENTDAQDMA
                     DLVRSVTEPGLKDRIAKYLAAR"
     gene            1910..>2405
                     /locus_tag="VIC30_00985"
     CDS             1910..>2405
                     /locus_tag="VIC30_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012356373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase"
                     /protein_id="HEY7803003.1"
                     /translation="MNQTLSVQPQALQQFVSRLDALVAAGGESQPDFWSRLGDAMREL
                     VAKDDWLPDAMAVPHPQFYQQYCLYADPQDRFSVVSFVWGPGQATPIHDHTVWGVIGM
                     LRGAEVCQAFEPDAVSAPKAIGEIERLEPGQVGFVAPSIGDVHRVANAYDDRVSISIH
                     AYGGN"
BASE COUNT          504 a          603 c          743 g          555 t
ORIGIN      
        1 gattttgagg aacaaaacct tgcagacatt accgctagag ggcgtgcgtg tgattgaact
       61 gtgcaacgtg gccgctgggc cattttgtgc aatgttgctc gcagacatgg gtgccgatct
      121 catcaaggta gaaaacccca aggggggcga tacgttacgt agctggccac cgatctcaga
      181 cggctatagc gagaacttcg cttcgctaaa ccgcaacaag cggtccgtca cgcttgacct
      241 taaaagtcct gaagaccttg agaggttcaa gcgcttgatc aagaccgccg acgtgctcat
      301 tgagaacaat cgtcctggtg tcatggatcg cttgggaatc gggtttgatg tgttgaaagc
      361 cttgcaaccc aagttggtga tggcctcgat ttcagcttat gggcagaccg ggccgcgcgc
      421 ggccgaaggt gggtttgatt tgaccgtgca ggctatgagc ggcctcatga gtgtgactgg
      481 tgagccaggt ggtgcgccgg tcaaatgtgg ggttcctgtg gcagattttt cggcagggct
      541 gtacgcggca tatgccgtgg tgtgtgcgtt gcgcaacgcc gaggcctcgg gccaaggcac
      601 gcacatcgac gtgcctatgc taggtgccac gctaggcatt gccgcattgc agacgtctga
      661 gtacttcggc agtgggaaag atcctgtcaa gctcggctcg gcacacccac gcaatgcgcc
      721 ttatcaggcc tttcagtgcc gagacggtta ctttggaatg gccgcaggca acaacgcgct
      781 ttggcaagcg gtttgcgatg tcgtggagca accgcaatgg cgcgatgatg aacgctttca
      841 gacaccgacc ttgcgggcgc aacaccagac cgtgttgcgt gagatgcttg aagccatctt
      901 tatgcaagac gacgccagtg tttggttaga gcgttttcga gctgccggtg tgccttgtgc
      961 accgattaac acctatgctg aggttctagc cgatgagcaa gtcgcgcaca tgcagtgggt
     1021 gaagtctttg acactgccca atggtgttca gactaagacc tttggctcac cggttcagtt
     1081 tgatggtcag tcaaccccga ttcgtcgtgc accgccggcg cttggtgagc ataacgacga
     1141 tgtaattgga gaactgccat gagtgtccct gttgtcgtag acaaacaagt ggattactgg
     1201 gcggtgacgt tgaaccgacc ggataagcgc aatgccttaa gtggcgagct cgttgagggt
     1261 ttgattgagg ttgttgagca ggcgcaagca gaaaaacccg cattactggt gttgcgcggt
     1321 gaaggtaaaa atttcagtgc tgggtttgac tttaccgatt ggcaagaggc cagcgaaggg
     1381 gatttgctat ggcgctttgt gcgcattgag cagttgttgc aaatgctgca agccctgccg
     1441 gtgttgacgc tggccttggc gcatggcaag aactttgggg ctggtgttga tttaatggcg
     1501 gtgtgcaagc atcgggtggc ttctgacgat gcgacgtttc gcatgccggg tttgaagttc
     1561 ggtctggtgc taggcacacg tcgtttggcc aggttagttg gtgtgcaaac cacgcgccag
     1621 attcaacaag tcgctaagac actcaatgcg agcgaggctc acaccactgg tttggtctca
     1681 gcgttggccg agcccgaggc ttggcctcat gtcatcaagc agcaaggcga catcgcgaca
     1741 tctctgacac cgagtgcccg ggcgtcgctg tatcgggttc tagacgagaa caccgatgcc
     1801 caagacatgg ccgatctggt gcgttcggtc accgagccgg gactcaagga ccggattgct
     1861 aaatacctag ccgcacgcta aggtcaacaa accattgcag gggatcttta tgaatcagac
     1921 actatcagtg caaccacaag cgttgcaaca attcgtctct agactcgatg cgctcgtggc
     1981 cgccggtggc gagtcacagc ccgatttctg gtcgaggctt ggcgatgcga tgcgcgagtt
     2041 ggtggccaaa gacgactggc tgcctgatgc catggcagtg ccacatccgc agttctacca
     2101 acagtattgc ctatacgctg atccccaaga ccgtttctcg gtggtgagtt ttgtgtgggg
     2161 gccaggccaa gccacgccga ttcatgatca cacggtctgg ggtgtgattg gcatgttgcg
     2221 gggtgccgag gtctgtcagg cgtttgaacc cgatgccgta tctgctccca aagccatagg
     2281 tgagatcgag cggttagagc ctgggcaagt cgggtttgtc gcaccgtcta ttggagacgt
     2341 gcatcgtgtg gccaatgcat acgacgatcg cgtctcgatt agcattcacg cctatggcgg
     2401 caaca
//
LOCUS       DATBNL010000059         2817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_40580, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000059 DATBNL010000000
VERSION     DATBNL010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40580"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            411..896
                     /locus_tag="VIC30_00990"
     CDS             411..896
                     /locus_tag="VIC30_00990"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEY7803004.1"
                     /translation="MAMAEIGQAEWIAVVVTMITVLSAVFFHFEGIAALNRWSKRQPS
                     HERLDHHHRPTLLKVVFALLLIHIIEIWWFGAAFWLLAGLPGLGEIVGYANMSFLEYV
                     YFSATTYTTVGYGDLYVTGPMRFLAGTEALVGFMLITWSASFTYLIMVRTWGEGTNSE
                     H"
     gene            1380..1613
                     /locus_tag="VIC30_00995"
     CDS             1380..1613
                     /locus_tag="VIC30_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008252273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HEY7803005.1"
                     /translation="MSNPSKRSTVYFDPQLHAALRLKAAHTNRSLSDIVNEAVRAALA
                     EDQEDLAAFEERVAEPTLSYEALLDDLKANGKL"
     gene            1600..1863
                     /locus_tag="VIC30_01000"
     CDS             1600..1863
                     /locus_tag="VIC30_01000"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7803006.1"
                     /translation="MASYKLVFRKSVSKDLRFIPNKDVARILRRIEGLQDNPRPDDSE
                     KLSGQERYRIRQGAYRVIYELEDERLVVTVVKVGHRKNVYKSR"
     gene            2267..>2817
                     /locus_tag="VIC30_01005"
     CDS             2267..>2817
                     /locus_tag="VIC30_01005"
                     /inference="COORDINATES: protein motif:HMM:NF013885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HEY7803007.1"
                     /translation="MESTIVSAVILPLSLFLVMAGIGLSLTLEDFANVIKYPRTVIVG
                     LCGQLILLPLIALVMIWLIPFTSPLVAAGFLIIALAPGGATSNLFTFLAKGEVAASIT
                     LTAVISLITPFTMPILAAWFLNVVDPGQIELPIGQTVVQLVAITFVPVTLGMVVRRYA
                     TRVAQKMQTPVQAFSLLTLFVIIA"
BASE COUNT          674 a          692 c          736 g          715 t
ORIGIN      
        1 catatttcca ggcccggctg atcgtgttac gttcgtggca caaatgattc cgggctcttg
       61 ctccatggca catctaagcc tccgtcttcc agacgacatc acccgctcgc tcgaccttga
      121 atttgtgctc caaccgagga ctaaaggctc acaaaatgaa attgaggaga tgttctagtg
      181 gcgcaaaaag tctctgagat tagtgtctga acgattgagg tgtgggctta tgaccattcg
      241 ctagatgctt tcagcgacga ccaagtcaaa caagtttagc aagcaagtga agatgatcgc
      301 ggtggacgct ttcgtgaggc ttaacaacaa acaagccaga agccacaggc ttgcgctatg
      361 ctaggccaat acaaacacgc agttgatggc gagataacat tagacatgtc atggcaatgg
      421 cagaaatagg ccaagcagaa tggattgcag tcgtggtcac gatgatcacg gttttgtcgg
      481 ctgtgttctt tcactttgag gggattgcgg cactcaatcg ttggagcaag cgccagccta
      541 gccatgaacg cctggatcac caccaccgac ccacgttact taaagttgtt ttcgctttgt
      601 tgctgatcca catcatcgag atctggtggt ttggtgcggc tttttggcta ctcgctggcc
      661 tgcctgggct cggcgagatc gtcggctatg ccaacatgag tttcttagag tatgtctatt
      721 tctccgccac cacctacaca acggtaggtt atggcgatct ctatgtcaca ggccccatgc
      781 gctttttggc aggcactgag gccttggtcg ggtttatgtt aatcacttgg tcggcctcat
      841 tcacctacct catcatggtc cgaacttggg gtgaagggac caactcagag cactaaacca
      901 ggctcgcctg aattctggcg aagcaagtga tcaaaaagtt aaacctcgac aaagtacgcc
      961 cccagaatgt gctcgaattg atgggtctgc gggggaggaa gtgaaaaaag agaggttata
     1021 aatgcattgt cactaaaacc gaaaagtcat ggagcgctaa aacccacaaa gtgtgcggcg
     1081 ttagaatcga caagcgatcg gtttgagtta aaagatggcc acacctcaac aaaagcttgc
     1141 cagttcgctt gaatagctaa aacgggtcca ggaggacacc ggtacggttg tgcgctcaga
     1201 tcaactcagt cgaacatacc gaaacaggct gatccagaat gggttcctct ccaaagtcat
     1261 gcgtggctgg tacagcgcga caagcctgtg tgtgctacct gcaaagtggc agaggacatt
     1321 ttgacgctat gacgctttaa cgctataatg gcataccagc ttaaaattga aaaagtgcta
     1381 tgagtaatcc atctaagcgt tccacggtgt atttcgatcc gcaactgcac gcagcgctgc
     1441 gtcttaaggc cgcgcataca aatcgttccc tgtcagatat tgtcaatgag gctgttcgtg
     1501 ctgcattagc tgaagaccag gaggatctgg cggcgtttga ggagcgggtg gctgagccga
     1561 ccctgagtta tgaggcgctg cttgacgact tgaaggccaa tggcaagcta taagctcgta
     1621 tttaggaaat ctgtttccaa agatcttcgc ttcataccga ataaggatgt tgcccgcata
     1681 ctccggcgga tagagggctt gcaggataat cctcgccctg atgacagtga aaaactctcg
     1741 ggccaagagc gttaccgaat tcgccaaggg gcataccgag tcatctatga actagaagat
     1801 gagcgtcttg tcgtgacggt tgtcaaggta ggccatcgaa aaaacgtcta taaaagtcgc
     1861 tagtgtcatt caatcgatgc gtactgttat gtcgcatcac agcggcgcag cgccggccaa
     1921 cgtgaatgct gaacctttta tttgatatcg cttctggact ggtaggttgg gccggcactt
     1981 ctcagacaca cctgaccctc acggtgaggt ttgttcagaa tacttaggac tgatccgacc
     2041 aagataattg tatcggtggg gttgcatgcc aaatatttcg acgtcatcga gcatctgggc
     2101 acagctcaga tctcgtgtat gatcgatggg gttttagatc tgttcttcgc tcatgagact
     2161 aaagaacggt tcggtgatgg cgttatccga gcagttgccc tgtcggcttg agccgaactt
     2221 tggtgttgaa aacagtatgt gatcacaatc aatcaagggt gagctaatgg aaagcaccat
     2281 tgtatcggcg gtcatactgc ccctatcgct ttttcttgtc atggccggaa ttggcctcag
     2341 tctgacattg gaagactttg ccaatgtcat caaatacccc agaaccgtca ttgtcggtct
     2401 gtgtggtcaa ctgatcttgc tgcctttgat cgccctggtg atgatctggc tgatcccgtt
     2461 taccagcccg ttggtggccg ctgggttttt gatcattgct ttggcaccag ggggcgcgac
     2521 ttccaatctg ttcacgtttc ttgccaaggg agaggtggct gccagcatca ccctaacggc
     2581 ggtgatcagt ctcattacac ccttcaccat gcccattctt gcggcctggt ttttaaacgt
     2641 cgttgacccc ggccagattg agttgccgat cggtcagacc gttgtccaac tggtggccat
     2701 cacttttgtg cctgtaaccc tcggtatggt ggttcgtcgc tatgccaccc gggtggctca
     2761 gaagatgcaa acccccgtcc aggcattcag tctgctgaca ttgttcgtca tcatcgc
//
LOCUS       DATBNL010000060         4304 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_80551, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000060 DATBNL010000000
VERSION     DATBNL010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80551"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..656
                     /locus_tag="VIC30_01010"
     CDS             <1..656
                     /locus_tag="VIC30_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803008.1"
                     /translation="QLHLPAGSAWGTVLPLGDTDLWRVDAGCPLAVAKAAGLLAADWP
                     ETMSNVAQWFATAFRGQPLAQTGLSDHLVSVDWMLPDGTIEVFGAFGTSDSQPLSSLA
                     AQKVVPQLFELSATPALQATDRNKHWPLQYHLDALMDPAAVHLAHCLIGHGGSLGWLV
                     AATFKQTQTPLPPIEVSTPSRNHGKGLRLSERCELDEAIKQIIDPDGVFMSLPPQTE"
     gene            734..3031
                     /locus_tag="VIC30_01015"
     CDS             734..3031
                     /locus_tag="VIC30_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006385615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEY7803009.1"
                     /translation="MDDNFRKSALLYHEQGRPGKISIAPTKTLSNQRDLALAYSPGVA
                     AACEEIVIDPANVVRYTARGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFA
                     GIDVFDIEINEQDPQKLVEIIAGLEPTFGGINLEDIKAPECFTVERELRKRMNIPVFH
                     DDQHGTAICVTAAFINGLAVVEKPIDQVKVVVSGAGAAALACLDLMVDMGLPLKNIWV
                     TDIEGVVFEGREVLMDPDKARYAQKTEARKLADVIGDADVFLGLSAGGVLKPEMVAQM
                     AKRPLILALANPNPEILPADAHAVRDDVVMATGRSDYPNQVNNVLCFPYIFRGALDVG
                     ATTITRGMEKAAVQAITSLAQEEQSEVVQAAYGTGDVSFGPNYFIPKPFDPRLITRIA
                     PAVAKAAMQEGVAQRPIADLESYLEQLEQFVYQSGAFMKPVFSAAKAHVKAGGKSRVV
                     FTEGEDERVLRAVQVVVDEKLAHPILVGRPTVLADRIDKHGLRIKLGEDVEVVNPDWD
                     DRFNRYWTTYWERMCRRGVTKEMARVEMRRRLTLIGAMMVHLGDADGMICGTVGGFSD
                     HLRYVDQMIGLAPGETTYGAMNILLLPNHTLALVDTHVNDDPSAEQVAAFTIAAAKQM
                     TRLNLVPKVALLSRSNFGTGSSASGQKMRDALELIRQQAPELEVAGEMHGDCALDEAL
                     RQKVLPSTTLKGSANLVVCPNVDAGNIAYNLLKTAAGGNVAVGPFLLGVNAPVHILTS
                     SATVRRIVNMTAVTVVHANHQAEKS"
     gene            3179..3634
                     /locus_tag="VIC30_01020"
     CDS             3179..3634
                     /locus_tag="VIC30_01020"
                     /inference="COORDINATES: protein motif:HMM:NF013500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HEY7803010.1"
                     /translation="MSKQQDRQLRELLKKGGAVPVEHLELVRAATDSAELVWCEADCS
                     KARNRSALFRAVVKAVDYPQFFGGSFEGLYDCLSDSISDQRIGLVLVFKDLHVADPDI
                     ERDLPELNQVLQDVVDSAAKSERVFIYCIEDGGKHPDDAPGVFHSWSED"
     gene            complement(3659..>4304)
                     /locus_tag="VIC30_01025"
     CDS             complement(3659..>4304)
                     /locus_tag="VIC30_01025"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEY7803011.1"
                     /translation="LFDGSGSESTALLQFEPSGQAFALITSTQSIDRELPWHITLVQG
                     IASQDRMDWVIEKAVEIGVTDFVPLLADRSVVKLSEDRAQKRLAHWQKLIISASEQCG
                     RNRLMEIQVPCGMDEAIRHCNNNPILWCHANADTVSIGDQGVIQTVAAANHACLVVGP
                     EGGFSDNEARHWQAAGAQAISLGARILRTETAGLAAIASLNALLEQHRLSKTNA"
BASE COUNT          949 a         1061 c         1244 g         1050 t
ORIGIN      
        1 tacaacttca tctaccggct ggctcggcgt ggggaactgt tttgcccctc ggtgataccg
       61 acttgtggcg cgtcgatgcg ggttgcccct tggccgtggc aaaggcggcc ggcttgctcg
      121 cagccgattg gcccgagaca atgagtaatg ttgcacagtg gtttgccacg gcgtttcgcg
      181 gtcagccgct ggcacaaaca ggcttaagtg atcatctggt aagtgttgac tggatgctac
      241 ccgatggcac gatcgaggtg tttggggcct tcgggacttc ggactcacaa cctttatcat
      301 cgctggcggc gcaaaaagtg gtgccacagc tgtttgagct atcggcgacg ccagccttac
      361 aggcgaccga tcgaaacaaa cattggccat tgcagtacca cctcgatgcg ctgatggacc
      421 cggcagccgt gcacttggct cattgtttga tagggcatgg gggatcgctt ggctggctgg
      481 ttgccgctac gttcaaacag acgcaaacac ccttgccgcc cattgaggtc agcacaccga
      541 gccgtaacca tggcaagggc ttgcgtttgt ctgaacgctg cgagcttgac gaggccatca
      601 agcagatcat cgacccagat ggtgtgttta tgtcgttgcc accacaaacc gaatagaatg
      661 gatttgatca aactgtacgc atctagtttt ttgtagtgat tttctttaac cgctttctac
      721 ccttaggcga ttcatggacg acaactttcg caaatcggct ttgctctatc acgaacaagg
      781 ccgccccggc aaaatctcga tagcgcccac taaaactctg tctaaccaac gcgatcttgc
      841 actggcctat tcgccaggtg tcgctgcggc ttgtgaagag attgtcatag atccggccaa
      901 tgtggtgcgc tataccgctc gtggcaatct cgttggtgtg atcaccaacg gcacggcggt
      961 gctcgggctt ggcaacattg gggcgctagc ctcaaagcca gttatggaag gcaaagcggt
     1021 gttgtttaag aagttcgcgg gtatcgatgt gttcgatatt gaaatcaatg aacaagatcc
     1081 acaaaagctt gtggaaatca tcgccggatt ggagccgaca tttggcggca ttaacctcga
     1141 agatatcaag gctcccgagt gctttaccgt tgaacgggaa ttgcgcaagc gaatgaacat
     1201 cccggtgttt catgacgacc agcatggcac cgcgatttgt gtcacagcgg ctttcatcaa
     1261 tggcttggca gtcgttgaaa aaccgattga tcaagtcaaa gtggtggtgt ccggtgctgg
     1321 cgcggcggcc ttggcttgtt tagatttgat ggtcgacatg gggttgccgc ttaaaaacat
     1381 ttgggtcacc gacattgaag gtgtggtgtt tgagggtcgt gaggttctca tggatcccga
     1441 caaggcccgt tacgcgcaaa agaccgaggc acgtaagctc gctgatgtga ttggtgatgc
     1501 cgacgtgttt ttgggtttat cagctggtgg tgtgctaaag cccgagatgg ttgcgcagat
     1561 ggccaaacgg ccgttgattc ttgcgttggc caatcccaat cccgagatct tgcccgccga
     1621 tgcacatgcc gtgcgcgatg acgtggtgat ggccacgggg cgttcggatt atccgaatca
     1681 agttaacaac gtgttgtgtt tcccgtacat ttttcggggc gcgcttgatg tcggtgcgac
     1741 aaccatcacc cgcggcatgg aaaaggcggc tgtacaggcg attacgagcc tggcacaaga
     1801 agagcaaagt gaggtggtgc aagcagccta cggtaccggt gatgtgtcat ttggcccgaa
     1861 ctatttcatt cctaaaccat tcgatccacg tttgattacg cgaattgcac cggccgtggc
     1921 caaggcagcc atgcaagaag gtgtggcgca acgtccgatc gccgatttag agagctatct
     1981 cgagcaactc gagcagtttg tctatcaatc tggtgctttc atgaaacccg tgttctcagc
     2041 ggctaaggcg catgtcaaag caggcggcaa atcccgggtg gtgtttactg agggtgaaga
     2101 cgagcgtgtg cttcgggccg tgcaggttgt ggtcgacgag aaactggccc atccgattct
     2161 ggttggccgc ccaacggtgt tagccgaccg tatcgacaag cacggccttc gcatcaaact
     2221 cggtgaggac gttgaggtgg ttaatcccga ctgggatgat cgtttcaatc gttactggac
     2281 cacgtattgg gagcgtatgt gccgacgcgg tgtgaccaaa gagatggcgc gcgtggaaat
     2341 gcgacgtcga ctgacactca ttggtgccat gatggtgcac ttaggcgatg ctgacggcat
     2401 gatctgcggc acggttggcg ggttttctga tcacttgcgt tatgttgacc aaatgattgg
     2461 gctggcaccg ggtgagacga cctatggtgc aatgaatatt ttattgttac ccaaccatac
     2521 attggctttg gttgatacgc atgtcaacga tgatccctca gcagaacaag tggcggcgtt
     2581 cacgatcgct gcggccaaac aaatgactcg attgaatctg gtccctaaag tcgcgctgtt
     2641 gtcacggtca aactttggta ccggttcaag tgcctccggg cagaagatgc gtgatgcgct
     2701 tgaattgatt cgccagcagg cgcccgagct agaggtcgcc ggtgaaatgc acggcgactg
     2761 tgcgcttgac gaggctttgc gtcagaaggt tctgccatca acgaccctta aaggctcggc
     2821 caatctggtg gtctgtccta atgtcgatgc cggtaacatt gcctataacc tgcttaaaac
     2881 ggcagctggt ggtaatgtgg cagtgggacc tttcctgttg ggggttaacg caccagtaca
     2941 cattctgact tcaagtgcca ctgtgcgaag gattgtcaac atgacagcgg ttacggtcgt
     3001 tcatgccaac caccaagcgg aaaaatcctg ataacactgt tagtagcgag ggtttgtgtg
     3061 ttgcattttt gaatagtccc atcccttgtt tgcaaaatgt cacacatggc gattgattcg
     3121 agcgcattaa gtcgatacga ttcgcgcatg tgcatcggat tttctagagg ggctggcgat
     3181 gagcaagcag caggatcggc agttaagaga attgttaaag aaaggcggag cagtgccggt
     3241 cgagcactta gagttggttc gtgcggcgac agactctgcc gaactggtct ggtgtgaagc
     3301 cgattgttcc aaggcacgta atcgctcggc tttgtttcga gcggtggtta aagccgtgga
     3361 ctacccgcag ttttttgggg gcagtttcga ggggttatac gattgcttat cagattctat
     3421 ttctgatcaa cgcattgggt tagtgttggt gtttaaagac ttgcacgtgg cagaccctga
     3481 cattgagcgc gatttgccag agctcaacca agttctacaa gatgtggtcg atagcgcagc
     3541 caaaagcgag cgggttttta tctactgcat tgaagatggt ggcaaacacc ctgatgatgc
     3601 gcccggtgtc tttcacagct ggagtgagga ctaaggacta aggactaagg attaagaact
     3661 aagcgttcgt ctttgataag cggtgctgct caagcagtgc gtttaagctt gcgatggctg
     3721 ccaaaccagc ggtttctgtc ctcagtatcc gcgccccgag cgagatagcc tgagcgccgg
     3781 cggcctgcca gtgacgagcc tcgttgtcgc taaagccacc ttcaggcccg acaacaaggc
     3841 aagcatggtt tgctgcggcc acggtctgta taaccccttg atcgccaatg ctgaccgtgt
     3901 ctgcattggc atgacaccaa agtatgggat tgttgttgca gtgcctgatg gcctcatcca
     3961 tgccacacgg cacctggatt tccatgaggc ggttacggcc acattgttcg ctagcggaga
     4021 tgatgagctt ttgccaatgt gcgaggcgct tttgagcgcg atcttcgctt agcttcacca
     4081 cgctgcgatc ggccaacagc ggcacaaaat cggtgacgcc aatctcaacg gctttttcaa
     4141 tcacccagtc catgcgatcc tgactcgcga tgccttgcac caacgtgatg tgccacggca
     4201 gttcccgatc gatggattgt gtggatgtga tcaacgcaaa agcttgcccc gacggctcaa
     4261 attgcagtaa ggccgtgctt tcagagcctg agccatcgaa taaa
//
LOCUS       DATBNL010000061         1825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_30633, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000061 DATBNL010000000
VERSION     DATBNL010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30633"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            349..1566
                     /locus_tag="VIC30_01030"
     CDS             349..1566
                     /locus_tag="VIC30_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803012.1"
                     /translation="MKPTKVPFTPLHGLASLGAGGLSVSFFVWLMFLTAHPDSPVPTY
                     ESLALAKTNATDLGWITFVTTMVAVMAFAHYALLVWWLRQGARLPTSDKATLFSGEAH
                     VFRMITPLVLAMSVNAGFVVGLVFVPGLWQVKEWLFPFALLAFALLLVMAIQRWLAQQ
                     ARLKSEQLSYRNKGLIELLATFAFAMITVGFSASAAMSDTVWVHTTGLVLSVLGGVMA
                     IWAAIGVLRDRVSTLREHPVAAAATGSLLMGVPILTILGIASYRLMMAGQHHFAVELE
                     QTVIAATLGVLFIAQILIFVVATPTVLRRGGWRTLVTKQPQGASFSLICPGVGLFVLG
                     MFLVSNGLAPLGLLSEFGLTLSYSVLAVVQLVTLVLFAYLLIYAMPGKHLKRSPATQH
                     ARSTKAASANTSY"
     gene            1606..1767
                     /locus_tag="VIC30_01035"
     CDS             1606..1767
                     /locus_tag="VIC30_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803013.1"
                     /translation="MNKLAHLPIALFASVMGMSGLTLGWLKAGTEGWPVANPIGFALA
                     IITTTLLGA"
BASE COUNT          378 a          463 c          491 g          493 t
ORIGIN      
        1 caagcccttt ttacgcaggt aatgcgcaag cttgcctgca tccgttaccc caacatcttc
       61 aagcgcacgc gcatgatcgg actggccggg gccggcaggt gcagtcttgg catggcggac
      121 aagcaaaagg gttttcatgg ggacgggtgc agtgagagaa aaaaggggat tacttcgagc
      181 gttgaagttc aatcctgaat tcgaatatta accgtagcga accgacaaat ttgtgacgat
      241 tagaaacaac tgggcagcag ctaacagcac agttgacaca ggtcaagcta gaacactatg
      301 tgattttata aactgaagtc atcaagaagc tctcaaggag caatggcgat gaaacccacg
      361 aaagttccat ttacaccgtt acacgggctc gcgagtttgg gcgcaggtgg tttgtcagtc
      421 agtttttttg tgtggctgat gtttttgaca gcacacccgg attcaccggt acctacttat
      481 gaatctttgg ctttggctaa aaccaatgcc accgatcttg gctggatcac atttgtcacg
      541 accatggttg cggtgatggc atttgcgcat tatgcgttac ttgtctggtg gctgcgccaa
      601 ggcgcgcgac tgccgacatc tgacaaagcc acactgttta gtggcgaagc gcatgtgttt
      661 cgcatgatca cgcctttggt acttgccatg tcggtcaatg ccggctttgt ggttggtttg
      721 gtgtttgtgc ctggcctttg gcaagtcaaa gaatggttat tcccctttgc cttattggcg
      781 tttgcccttt tgttggtgat ggccatacaa cgctggttag cccaacaggc gcgcttgaag
      841 tccgagcaac tgtcctaccg taacaagggg ctcattgaat tgctggcaac gtttgcgttt
      901 gccatgatca ccgtgggttt ttctgcgtcg gctgccatga gtgacacggt gtgggtacac
      961 accacaggct tggtgctgtc agtgctcggt ggggtcatgg ctatttgggc tgctattggc
     1021 gtcttgcgtg accgtgtcag cacattgcgc gaacatcccg tggccgcagc ggccaccggt
     1081 tcgttgctca tgggtgtgcc gattctgacc atcctcggta ttgccagcta ccgtctgatg
     1141 atggctggtc agcatcactt tgccgttgag cttgaacaaa ccgtcattgc agcaacactc
     1201 ggtgtgcttt tcatcgcgca gatcctgatc tttgtggtcg ctacaccaac ggttttacgc
     1261 cgtggtggct ggcgcacgtt ggtcaccaag caaccgcagg gcgcgagttt ctctctcatt
     1321 tgcccaggtg tcgggctgtt tgtgcttggt atgtttttag tgtccaacgg attggcgcca
     1381 cttgggctct tatctgagtt tggcctgacc ttaagctaca gcgtactggc cgtggttcaa
     1441 ttggtcacac tggtattgtt tgcgtacttg ctgatctatg ccatgccggg taaacatcta
     1501 aaacggtcgc ctgctaccca acatgctcgt agcacaaagg cggcaagcgc caatacctcc
     1561 tactaattta gcccaccact taattgcctt tcacaggacg tctacatgaa caaacttgcc
     1621 cacctgccaa tcgctttatt tgccagtgtc atgggcatgt cagggctaac cttgggctgg
     1681 ctcaaggccg gcaccgaggg gtggcccgtg gccaatccca tcggttttgc gttagccatc
     1741 atcaccacga cgttgcttgg tgcataaggc gtagtttcag taaataaatc gtcggtgcct
     1801 tctaaatctc cgaagacttc atcga
//
LOCUS       DATBNL010000062         1588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_189751, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000062 DATBNL010000000
VERSION     DATBNL010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189751"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /gene="prpB"
                     /locus_tag="VIC30_01040"
     CDS             <1..337
                     /gene="prpB"
                     /locus_tag="VIC30_01040"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813658.1"
                     /note="catalyzes the formation of pyruvate and succinate
                     from 2-methylisocitrate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEY7803014.1"
                     /translation="IFAEAAYDLPTYEKFVKAVGVPVLANITEFGKTPLFTVEELRSV
                     NVGMVLYPLSAFRAMNKAAETVYETIRRDGHQKNVVDMMQTRDELYDRIGYHEYEQKL
                     DALFTQSKS"
     gene            366..1553
                     /gene="prpC"
                     /locus_tag="VIC30_01045"
     CDS             366..1553
                     /gene="prpC"
                     /locus_tag="VIC30_01045"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEY7803015.1"
                     /translation="MATTRKTATKKTVEQPTSAPKPKKSVALSGVIAGNTALCTVGRT
                     GNDLHYRGYDILDFADVCEFEEIAHLLIHGKLPTKSELVAYKEKLKAMRGLPAQVQAA
                     LEALPASSHPMDVMRTATSVLGCVLPEKDDHNIPGARDIADRLMASLGSALLYWYHYS
                     HNGRIIDVQTDDDSIGGHFLHLLHGKTPDQDWVRAMHTSLILYAEHEFNASTFTSRVI
                     AGTGSDMYSAITGGIGALRGPKHGGANEVAFEVQKSYETPDEAEADIRRRVENKEVVI
                     GFGHPVYTISDPRNEVIKSVAQRLSKKANNMKMYNIAERLEAVMWDAKKMFPNLDWFS
                     AVSYHMMGVPTAMFTPLFVIARTAGWSAHIIEQRVDNKIIRPTANYVGPENLKFAPIS
                     RRK"
BASE COUNT          406 a          449 c          394 g          339 t
ORIGIN      
        1 tatctttgct gaagccgctt atgacttacc gacctacgaa aagtttgtca aagctgtagg
       61 cgtgcctgtt ttggccaaca tcaccgaatt cggcaaaacc cctttattta ccgttgagga
      121 attgcgctca gtcaacgtcg gcatggtgct gtatccgtta tcggcatttc gcgccatgaa
      181 caaagccgca gaaactgtct acgagaccat ccgtcgcgat ggccaccaaa agaacgtggt
      241 cgacatgatg caaacccgtg atgaactgta cgaccgcatc ggctatcacg agtacgaaca
      301 aaagctagac gctcttttta cgcagtccaa atcttaagaa tctgattttg caacaaggag
      361 ttcgcatggc caccacccgt aaaactgcca ccaaaaaaac cgttgagcag cctacgtccg
      421 caccgaaacc aaagaaatct gtcgcgttgt ccggcgtcat tgccggcaac accgcactgt
      481 gtacggtcgg acgcacgggc aacgatctac attaccgcgg ctacgacatt ctcgacttcg
      541 cggatgtctg cgagttcgag gaaattgcgc acctgctcat ccacggcaag ttgcccacca
      601 aatccgaact agtcgcctac aaagaaaaac tcaaggccat gcgcggcttg cccgcacaag
      661 tgcaagccgc gcttgaagcg ctgcccgcct cgagccaccc aatggatgtt atgcgcacag
      721 ctacctctgt gttggggtgt gtgctgcccg agaaagatga ccacaacatc ccaggcgcac
      781 gtgacattgc agaccgcctg atggcaagct tgggctcggc cctgctctac tggtatcact
      841 acagccacaa cggtcgcatc attgatgtgc aaaccgatga cgacagcatc ggcggacatt
      901 tcttgcacct cttgcatggc aaaacacctg atcaggattg ggtgcgtgcg atgcacacct
      961 ccttgatcct gtacgcagag cacgagttca atgcatcaac atttaccagc cgagtgattg
     1021 ctggcacggg ctccgacatg tattcagcca tcacaggcgg cattggtgcg ctgcgcggcc
     1081 ccaagcacgg cggtgccaac gaagtggcct ttgaagtgca aaagagttac gagacgcctg
     1141 atgaagccga ggctgacatc cgtcgtcgcg ttgaaaacaa agaggttgtc attggctttg
     1201 gccatccggt ctacaccatt tccgacccac gcaatgaagt gatcaaatcc gttgcccagc
     1261 gcctatcaaa aaaggccaac aacatgaaga tgtacaacat tgcagaacgc cttgaggcgg
     1321 tgatgtggga tgccaaaaaa atgttcccaa atcttgactg gttctcagct gtttcgtatc
     1381 acatgatggg tgtgccaacg gccatgttca cacctttgtt cgtgattgcg cgcaccgcgg
     1441 gttggtcagc acacatcatt gaacaacgcg tggacaacaa gatcatccgc ccaacagcca
     1501 attacgtggg cccagagaac ttgaagtttg cgcccatcag ccgtcgcaag tagtcgcatt
     1561 tggtagtacg tattagcaag tagtcgta
//
LOCUS       DATBNL010000063         3793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10815, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000063 DATBNL010000000
VERSION     DATBNL010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3793
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10815"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="VIC30_01050"
     CDS             complement(<1..302)
                     /locus_tag="VIC30_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011829146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEY7803016.1"
                     /translation="MDTLFQATVQTEPFDFGQEYSAFLDGDRAAGAVASFVGRVREVN
                     DHQDIETLELEHYPGMTEKVMLEVLHEARARWPLLGARVIHRVGPLHPGENIVLVLT"
     gene            complement(304..558)
                     /gene="moaD"
                     /locus_tag="VIC30_01055"
     CDS             complement(304..558)
                     /gene="moaD"
                     /locus_tag="VIC30_01055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEY7803017.1"
                     /translation="MKISVLYFGELRESVDTAEEATEVVSGSTVSDLIEHLKTRGEPW
                     QSALTSPDPLRMAVNQDMANPATVLTEGAEVALFRPVTGG"
     gene            complement(555..1565)
                     /gene="glp"
                     /locus_tag="VIC30_01060"
     CDS             complement(555..1565)
                     /gene="glp"
                     /locus_tag="VIC30_01060"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEY7803018.1"
                     /translation="MTVTQRIAAGYEGQALAPGQAARIFTGAPVPPNTYAVVPQEVVQ
                     VDGDRIAISQPVGAGDHIRAQGEDIATGSEIIAPGKKLKPADLALAASVGITHVTTYQ
                     PLTVAILLTGDELVEPGTPLNPGQIYNSNRYWLQSLLTDIGCNVLDPGIVADTPEATR
                     AALHEASEKADVIITCGGVSVGEEDHVRAAVASMGRIDLWQIAMKPGKPLAYGKANKA
                     DFIGLPGNPVSAFVTFVLMGLPFLQLRMGLAPTPLAARHITADFSWPKADRRREFIRV
                     RQKTDDQGHISLDRWPNQGSGVMSSVAWADGLVDIPPGQTIKPGDAVPYLSLADLLGV
                     AQ"
     gene            complement(1562..1804)
                     /locus_tag="VIC30_01065"
     CDS             complement(1562..1804)
                     /locus_tag="VIC30_01065"
                     /inference="COORDINATES: protein motif:HMM:NF015418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803019.1"
                     /translation="MSQTTRPPLLDFDVAREQLLSYASAPTHLESLPLLQAHGRVLAK
                     AVVSPMDVPAFANSSMDGYAICPADASAPPAHPPWK"
     gene            complement(1818..2240)
                     /locus_tag="VIC30_01070"
     CDS             complement(1818..2240)
                     /locus_tag="VIC30_01070"
                     /inference="COORDINATES: protein motif:HMM:NF018201.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803020.1"
                     /translation="MIETMPMGHTALDAGTVSLQPILERLRQDHGLIPLIAELGGGPA
                     RYWQTPDSKTKVGVITPISQHFCETCNRIRLAVDGTIYLCLGQEEKIEMREMLRNNPN
                     DDEVIRQALAQGIHLKPERHHFREAPEKIVRFMSQTGG"
     gene            complement(2271..2801)
                     /locus_tag="VIC30_01075"
     CDS             complement(2271..2801)
                     /locus_tag="VIC30_01075"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY7803021.1"
                     /translation="MTPLIDNYGRKIEYVRISVTDRCDLRCNYCMPVGFKDYREPANW
                     LTFPEITRLASIMCDAGTRRIRLTGGEPLLRRNLPELVASLREQTSVQDISLTTNATR
                     LPRFAQALKDAGLDRINISLDSLQRDKVKEICGRDVLDQVIEGIDSAMAAGLGPVKIN
                     MVVMPGVNDDEIDAMF"
     gene            complement(2911..>3793)
                     /locus_tag="VIC30_01080"
     CDS             complement(2911..>3793)
                     /locus_tag="VIC30_01080"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7803022.1"
                     /translation="AFLPLMSLAQAAQDSAFKTALTDMQQTPVQYVTVGDIKVAYKTF
                     GQGQPLFAITGNGDTMDLWSPLFIEGLAKQHKVYIFDNRGAGLTSSGTKPFTIEQFAD
                     DTAGFMAQMGYKHAKVLGFSMGSRIALQLTIDKPDMVEKVVLYGCAPGGKQEVKRTAA
                     VQKIFADTSGTAAQQKERMFSVLIPKPWRESHPDPSTYFPPTTETITPEVRAKQNKAV
                     ASWPGVYDELGGINTPTMIMAGTADEVVPPANALTLVENIPASWLVRMSGGGHGMMYQ
                     FPNQMTDIVNTFLLTAN"
BASE COUNT          784 a         1034 c         1087 g          888 t
ORIGIN      
        1 gtcaacacca acacaatgtt ctcacctggg tgtagtggcc ccacgcgatg gatcacgcgg
       61 gcaccaagta gcggccagcg agctctggcc tcatgtaaga cttcaagcat gactttctcg
      121 gtcatgccgg ggtagtgttc gagttcaagg gtttcaatgt cttgatggtc attgacttcg
      181 cgcacacgac caacaaacga ggccacggca ccagcggctc gatcgccgtc aagaaacgca
      241 ctgtactcct gcccaaaatc aaagggttcg gtttgtacgg ttgcttggaa cagggtgtcc
      301 atatcagcca cctgtcaccg gacgaaacag tgccacttcg gcaccctcgg ttaacactgt
      361 agcggggttg gccatgtctt gattaacagc catgcgcagt gggtctggtg aggtcagggc
      421 gctttgccaa ggctcgccgc gggtcttgag gtgttcaatc aggtcgctga ctgtcgaacc
      481 gctaacaacc tcggttgctt cctcggcggt atcaaccgat tcacgtaatt ccccgaaata
      541 cagcacgcta atcttcactg cgccacacct aataaatccg ccaaagacaa atagggtacc
      601 gcatcaccgg gtttgatggt ttgacctggc ggtatatcca caagcccgtc agcccaagcc
      661 acgctgctca tcacgccaga accttggtta ggccagcgat ctaggctgat gtggccttgg
      721 tcgtcggttt tttgtcggac acggatgaat tcacgccgac gatcggcctt gggccagcta
      781 aagtctgccg tgatgtgtcg ggccgcgagt ggtgtgggcg caagccccat gcgcaattgt
      841 aagaatggca agcccatcaa cacaaaggtc acaaaggcac tgaccgggtt gccgggcagg
      901 ccaatgaagt ccgctttatt ggctttgccg taggccagcg gtttaccggg tttcatggcg
      961 atttgccaca gatcgatgcg acccatactt gccacggcag cacgtacgtg gtcttcttca
     1021 ccaaccgaca caccgccgca ggtgatgatg acatcggctt tctcgctggc ttcgtgcaat
     1081 gccgcgcggg tggcctctgg cgtgtcggca acgatgcccg ggtcgagcac gttgcagcca
     1141 atgtcggtca acaggctctg cagccaatac cggttgctgt tatagatctg acccgggttt
     1201 agtggggtgc cgggctcgac gagttcatcg cctgtcaata aaatcgccac cgtcagtggc
     1261 tgataggtcg ttacatgcgt gatgcctacc gaggcagcta gcgcaaggtc agcaggcttg
     1321 agttttttgc cgggggcgat gatttccgag ccagtggcga tgtcctcgcc ttgggctcgg
     1381 atatggtcgc ctgcgccaac gggctgagag attgcaatcc gatcaccatc gacttgcacc
     1441 acctcttgcg gcacgacggc gtaggtgttc ggtggcaccg gagcgccggt aaagatgcga
     1501 gcggcctgcc caggcgcaag cgcctgaccc tcatagcctg cggcaatgcg ttgcgtgacc
     1561 gtcatttcca gggggggtgc gctgggggtg cactggcatc agccggacaa atggcgtagc
     1621 cgtccatgct gctattggca aatgccggca catccatggg ggaaacaacg gctttggcca
     1681 acacacggcc atgcgcctgc agcaatggca gcgattctaa gtgggttggg gcactggcat
     1741 acgagagcaa ctgctctcta gccacatcaa aatccagtag cggtgggcgg gtagtttgag
     1801 acatcgggtt tattaggtta gccgccggtt tgcgacatga agcgcacgat tttctcgggc
     1861 gcttctctaa agtggtgtcg ctccggcttt aagtgaatgc cttgagccaa ggcttgtcga
     1921 atgacttcat cgtcgttagg gttgttgcgc aacatctcgc gcatttcaat tttctcttcc
     1981 tgacctaagc ataggtagat ggtgccgtcc acggctaggc gaatacggtt acacgtctca
     2041 cagaagtgct gactaatcgg ggtgatcacg ccaactttgg ttttactgtc gggggtttgc
     2101 cagtagcggg ctggcccgcc accgagctcg gcaatcagcg ggatcaagcc gtggtcttgg
     2161 cgcaagcgtt ccaaaattgg ttgcaacgat accgtgcctg catcaagtgc cgtatgcccc
     2221 atgggcatgg tctcgatcat gcgaagcatc agcccgcgat cgcggcagaa ctaaaacatc
     2281 gcgtcaattt cgtcgtcgtt aacgcctggc atcaccacca tgttgatttt caccggacca
     2341 agacccgcgg ccatcgcact gtcaatgcct tcgatgactt gatccaagac gtcgcgacca
     2401 caaatctctt tgactttgtc gcgttgcagg ctgtctagac tgatgttaat ccgatctagg
     2461 ccggcgtctt tgagcgcttg tgcaaaccgc ggcagtcgcg tggcgttagt agtcagcgag
     2521 atgtcttgta ctgacgtttg ctctcgcagg ctcgccacga gctcgggcag gttgcggcgc
     2581 aatagcggct ctccaccggt taggcggatg cggcgtgtac cggcatcaca catgatgctt
     2641 gccagacgtg tgatctcagg aaaggtcaac cagttcgctg gttcacgata gtccttgaat
     2701 ccaacgggca tgcagtagtt acaacgcaag tcgcagcgat cagtcacgct gatgcgcacg
     2761 tactcgattt tgcgcccgta gttgtcaatc agtggcgtca cagcttgtct cgattcttgg
     2821 attatttgag tcattatgct ggtaacgata ctgtaaaagt gcccgccttg ggtaaaactc
     2881 acaagacggg cagggtattg cgaggctgac ttagttcgcc gtgagtaaaa acgtattaac
     2941 gatgtcggtc atctgattgg gaaactgata catcatcccg tgtccaccac cactcatgcg
     3001 taccagccag gaggctggga tgttctcgac caaggtcaag gcattggccg gtggcactac
     3061 ctcgtcggcg gtgcctgcca tgatcatggt gggggtgttg atgccaccta gctcgtcata
     3121 tacacccggc caacttgcca cggccttgtt ttgtttggca cgcacctcgg gtgtgatggt
     3181 ctcggttgtg ggtgggaagt acgtcgatgg gtccggatga gactcgcgcc atggtttcgg
     3241 aatcaggacg ctaaacatgc gctctttctg ttgcgcagct gtaccggacg tgtcagcgaa
     3301 gattttttgc actgctgccg tgcgtttgac ttcttgtttg ccacccggcg cgcacccgta
     3361 gagcaccact ttctcaacca tgtctggttt gtcgatggtt agttgaaggg caatacgcga
     3421 ccccatggaa aaccccagca ccttggcgtg tttgtagccc atctgcgcca taaaaccagc
     3481 agtgtcatca gcaaactgtt caatcgtgaa cggtttggta ccactgctgg ttagccctgc
     3541 tccccggttg tcaaaaatat agaccttgtg ttgcttggcg aggccttcaa taaataaagg
     3601 gctccacagg tccatggtgt caccgttgcc ggtgatggca aaaagaggtt gcccttgacc
     3661 aaacgttttg taggcgactt tgatatcacc gacggtgacg tattgaactg gggtttgctg
     3721 catgtcggtc agagcggtct taaacgcgct gtcttgcgca gcttgcgcta aagacatcaa
     3781 cggcaggaac gcc
//
LOCUS       DATBNL010000064         2065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_863, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000064 DATBNL010000000
VERSION     DATBNL010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_863"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..569)
                     /locus_tag="VIC30_01085"
     CDS             complement(81..569)
                     /locus_tag="VIC30_01085"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009459108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HEY7803023.1"
                     /translation="MTKVLFVCMGNICRSPSAEGVFRHLINEAGLADVVGVDSAGTHG
                     FHIGEAPDARAMAAASKRGYHIEPRVARQVCAEDFREFDMILVMDWENLSALQQQCPK
                     IYHHKLMLLMRFANEYEEATVPDPYYGGTEAFSKVLDYLEDACQGVYEVVRKRATQYQ
                     AA"
     gene            complement(831..>2065)
                     /locus_tag="VIC30_01090"
     CDS             complement(831..>2065)
                     /locus_tag="VIC30_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEY7803024.1"
                     /translation="RAIETIKEELRERLKQFVDNGQLVEAQRLEQRTRFDLEMLGELG
                     FCKGIENYSRHLSGAKPGDPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRARKE
                     TLVQYGFRLPSALDNRPLRMEEFEQRMRQTVFVSATPANYENEHADQVVEQVVRPTGL
                     VDPMVEVLPALTQVDNLLEKARARIALGQRVLVTTLTKRMAEDLTDFLSEQGLKVRYL
                     HSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERS
                     LIQTIGRAARNLNGHAILYADRITDSMRRAMDETERRRNKQLAFNVEHGIEARSVTKA
                     VKELIDGVLQAPAMDGSDDDILLQDVRLDDEKSVAKAIKGLEKKMLEHARNLEFEQAA
                     AARDSLNKLKTQILQSGV"
BASE COUNT          494 a          561 c          493 g          517 t
ORIGIN      
        1 taatgactag cggatcgtcc actcgtaaaa aaaccgcgca ttggcgcggt tttttcgtaa
       61 gccgtgtgtt ttcttgagtc ttacgcggct tggtattggg ttgcacgctt acggaccact
      121 tcgtagacac cctggcaggc atcttcaaga tagtccaaca ctttggagaa ggcttcagtg
      181 ccgccgtagt atggatcagg caccgtggcc tcttcatact cgttggcaaa gcgcatcagg
      241 agcatcagct tgtgatgata gatcttgggg cattgctgct gcaaagccga caagttctcc
      301 caatccatga ccaaaatcat gtcaaattcg cggaaatcct ccgcgcagac ctgacgggcc
      361 acacgcggtt cgatgtgata accgcgtttg ctagccgctg ccatggcgcg ggcatcgggt
      421 gcctcgccaa tgtgaaaacc atgggtaccc gctgaatcca caccaactac atcagccaga
      481 cccgcttcat tgattagatg gcgaaacaca ccctccgcac ttggtgagcg gcagatgttt
      541 cccatacata cgaatagaac ttttgtcata gtggtgcgta ttttgaggga aaaccctcaa
      601 cttgtctaga aaaaaatttc gaaagttgca aacaggtgac agtactacat ttaaaactta
      661 gtagttttat ttcaagttat taggatctct ttgtgaagtt aattatagtt tagtgctgtt
      721 caaaaattgc actttttctc attaaatgat gcgttgcgaa agctacaaaa tgacgcggtg
      781 cgccatctct gaccaacagc atgccattta tgtcgagtct ttcgccagac ttacacgcca
      841 gactggagaa tttgtgtttt gagcttatta agcgagtcgc gtgcggcggc ggcctgttca
      901 aattccagat tgcgcgcgtg ctcaagcatt ttcttctcca ggcctttgat ggctttagca
      961 actgactttt catcatcaag gcgcacatct tgcaacaata tgtcgtcgtc agacccatcc
     1021 atagccgggg cctgtaagac accgtcaatc aactccttca cggctttggt gacactgcgt
     1081 gcctcaatgc cgtgctcaac attaaaggcc aattgcttat tacgccgacg ctcggtctcg
     1141 tccatggcac gccgcatgga gtccgtgatt ctgtcggcat acaaaatggc gtgaccgtta
     1201 agattgcgcg ccgcgcgccc aatggtttgg atcaagctac gctctgagcg taaaaaccct
     1261 tctttgtccg catccagaat cgccacaagc gagacttccg ggatgtctaa tccttcacgt
     1321 agcaggttga tacccaccaa cacatcaaag gtgccaaggc gcagatcccg aatgatctca
     1381 acgcgctcaa ccgtgtcgat atctgagtgt aggtagcgga ctttaagtcc ctgctcggac
     1441 agaaagtcgg tcaaatcctc tgccatgcgt ttggtcagcg tcgttacgag caccctttgt
     1501 ccaagtgcga tgcgtgctcg cgctttctcc agcaggttat caacttgggt aagcgctggc
     1561 agcacttcga ccatcgggtc aaccaggccg gttggacgca ccacctgctc aacaacctga
     1621 tcggcatgct cattttcata gttggcaggc gtggccgaca caaaaacagt ctggcgcatg
     1681 cgctgctcaa actcttccat gcgcagcggt cgattatcaa gcgctgatgg caatcgaaac
     1741 ccgtattgca ccagtgtctc tttacgcgcc cgatcaccgc gatacatgcc accgagctgg
     1801 ccaatcgtga catggctctc gtcgataaac atgagcgcat cggctggcaa gtagtcaatt
     1861 agcgtaggcg gcgggtcacc aggcttggca cctgacaaat gccgagagta attttcaatg
     1921 cccttacaaa aacccaactc accgagcatc tcaaggtcaa agcgggtgcg ctgttctagg
     1981 cgctgtgcct caaccaattg accgttatcg acgaattgtt tcaagcgttc acgcaattct
     2041 tctttaatcg tctcaatcgc tcgcc
//
LOCUS       DATBNL010000065         2442 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_140371, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000065 DATBNL010000000
VERSION     DATBNL010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140371"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..1091)
                     /gene="tsf"
                     /locus_tag="VIC30_01095"
     CDS             complement(213..1091)
                     /gene="tsf"
                     /locus_tag="VIC30_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEY7803025.1"
                     /translation="MAEITAAMVKELREKTDAPMMECKKALTEAAGDMAKAEEVLRVK
                     LGSKANKAASRVTAEGLVGVSIDAAGKTGAIVEVNCETDFVAKNEDFIGFVQQVADLV
                     TQHAPADVQALSELPMGEGTVESTRTALVGKIGENMTIRRFQRFATEGALASYVHGGK
                     IGVIVDYSGAEEIGKDVAMHVAATKPKAIDEHGVAEADKEAERSVARQKAAESGKPAE
                     IVEKMVEGAVQKFLKEVALLSQPFVKNDKQTVAQMLKEKSASVNGFALYVVGEGIEKK
                     ESDFAAEVAAAAAGNA"
     gene            complement(1231..1986)
                     /gene="rpsB"
                     /locus_tag="VIC30_01100"
     CDS             complement(1231..1986)
                     /gene="rpsB"
                     /locus_tag="VIC30_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013393438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEY7803026.1"
                     /translation="MSLMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEQT
                     VVKYADAAKYIRSIAAKNGNVLFVGTKRAARDIVAEQAQRCGMPYVNNRWLGGMLTNF
                     KTVKSSIKRLKDMEAIAADGGLERMPKKEALMFDREMEKLNRSIGGIKDMGSLPDVMF
                     VIDVGYHKIDVAEAHTLGIPVVAVVDTNHSPDGIDYVIPGNDDSGKAVALYATGMADA
                     VLEGREQAVNGLVEELAADEEFVELQDEAAPQE"
     gene            2209..>2442
                     /locus_tag="VIC30_01105"
     CDS             2209..>2442
                     /locus_tag="VIC30_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEY7803027.1"
                     /translation="MHVVTDPADLDKMRAACRDAAKVLDYLTPYVKAGVTTGELDQLV
                     LDYIKDELNVKSATVGYAPQGYPPFPGAICTSVN"
BASE COUNT          555 a          712 c          547 g          628 t
ORIGIN      
        1 catgaaacga cccctgagca tcgatagcga gtaatgaaac aaatcagagt ttagccgatt
       61 accgaacgtc gacttaccgt caaaatcacc aaaatcgtat acccgctatt tccgcctcta
      121 gactgcataa taaaaaaccg ggtccgactc tttcagcgaa gcagtctgaa cccggctgcg
      181 atttgcaaat cgctagaaag caatgcgaag cgttaggcgt tacctgcggc ggcagcagcc
      241 acttcagctg caaaatcgga ctctttcttc tcaataccct caccgacgac gtacaacgca
      301 aagccgttta cgctggcact tttttctttc aacatctggg cgacagtttg cttgtcattc
      361 ttgacgaacg gctgtgacaa caacgccact tccttcagaa acttctgcac cgcgccttcg
      421 accatttttt ctacgatctc tgctggctta ccggactcag ctgctttttg gcgcgcaacc
      481 gaacgttctg cttctttatc ggcttcggca acaccatgct cgtcaatggc cttgggcttc
      541 gttgctgcca catgcatggc gacgtcttta cctatttctt ctgcgcctga atagtccact
      601 atcacaccga tcttgccgcc gtgtacgtag ctagctaaag ctccttcagt tgcgaaacgc
      661 tggaaacggc gaatggtcat gttctcgccg atcttgccaa ccaaggcagt acgggttgac
      721 tcaacggtgc cctcgcccat cggcaattca gataacgctt ggacgtcagc tggggcgtgc
      781 tgggttacta aatccgcaac ctgctgcaca aagccaatga agtcttcgtt cttggccaca
      841 aagtcggttt cgcaattgac ttcaacaatc gcgcccgtct tgccagctgc atcaatactc
      901 acaccaacca ggccttcagc ggtcacacgc gaagctgctt tgttggcctt gctaccaagt
      961 ttgacacgca acacttcctc agcctttgcc atatctccgg cagcctcggt tagtgctttt
     1021 ttgcactcca tcatgggtgc atcggttttt tcacgcaact ctttaaccat tgcggcagta
     1081 atttcagcca tgtttgctcc gtaatctcta ttttgtggct cgggaatccg aacctcctta
     1141 ggcacactaa tcacatcgat gccgtgccac gaaattgtca gggcacgaca tcagtttgat
     1201 ggacgtgccc tgttgtactg actgtttact ttactcctgg ggagcagctt cgtcttgcaa
     1261 ctctacaaac tcctcgtcag cagcaagttc ttcaaccaaa ccattaacag cctgctcgcg
     1321 tccctcaaga acggcatccg ccatacccgt ggcgtacaac gcaacggcct tacccgagtc
     1381 gtcgttgccg ggaatgacat agtcgatgcc gtcaggtgag tggttggtat caaccacggc
     1441 caccacggga ataccgagcg tgtgagcttc ggccacatca atcttgtggt atcccacatc
     1501 gatcacaaac atcacatcag gcaaactacc catatccttg atgccaccaa tcgagcggtt
     1561 cagtttttcc atttcacggt caaacatcaa cgcttccttt ttgggcatgc gctctagacc
     1621 accatcagcg gcaatagctt ccatgtcctt caggcgcttg atcgagcttt tgacagtctt
     1681 gaagttggtg agcatgccgc cgagccagcg gttattcacg taaggcatgc cgcagcgttg
     1741 cgcttgctcg gcgacgatat cgcgtgccgc gcgcttggta cctacaaaca acacgttgcc
     1801 gtttttagca gcgatcgaac ggatgtactt ggccgcgtcg gcatacttaa caacagtttg
     1861 ttcgaggttg ataatgtgga ttttgttacg atgaccaaag atataagggg ccatcttggg
     1921 gttccagaaa cgcgtttggt ggccaaagtg cacacccgct tctagcattt cacgcatgag
     1981 tgacatgtat ttctcctagg gttggttcta gccatgcagc tgcaccgatt gttttgtgac
     2041 ggcaccctga cgctgcatcg cgcgatttgc aagacaagtc ttgcctttta tccagcttcg
     2101 ccttctgtta aaaactcttg gtaacaaggc cttttagtca gcgctttctg gaaagcctat
     2161 aattctacta cgtttttttc atcaaactct cgcccaaaga caaaccctat gcatgttgtg
     2221 accgatcccg ctgacctcga caaaatgcgt gccgcctgtc gggacgctgc caaagtgctc
     2281 gactacctta ccccctacgt gaaagctggg gtgaccaccg gtgagcttga ccaactcgtc
     2341 cttgactaca tcaaagacga actaaacgtg aagtcggcca ccgttggtta tgccccgcaa
     2401 ggctacccgc cctttccagg agccatctgc acatcggtta ac
//
LOCUS       DATBNL010000066         3998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10866, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000066 DATBNL010000000
VERSION     DATBNL010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3998
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10866"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..1086)
                     /locus_tag="VIC30_01110"
     CDS             complement(115..1086)
                     /locus_tag="VIC30_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011515840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEY7803028.1"
                     /translation="MLSRTADHLYWMSRYTERAENTARMLEVNWQMSLLPQSEQAARA
                     AWRAMLEISELTADFDAKYANATPANVLTYMVQDTDNPSSIMSCLRAARENARAVRGS
                     MTTDLWETVNTTWLDAQRQVGQGLLRIAPTDFFEWVKLRSNQSRGVHIGTMMRDEASH
                     FISLGIFIERADNVARLLDVKFLAAAEHMEQDLEHVEDFYYWAAILRSLSAFENYRMM
                     FRDAITPTRVADLLILSPRNPRSLVACMEQIVELLTKVRNASSGRTEHEARSMLAQLK
                     DMEIDEVFGQGLHEYLLTFLAGINQLALDISHHFLVPIAAPEPAESV"
     gene            complement(1089..2534)
                     /locus_tag="VIC30_01115"
     CDS             complement(1089..2534)
                     /locus_tag="VIC30_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016451260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEY7803029.1"
                     /translation="MLMSMADIASGYAGAPVRLHYRQLQTWLSDQNMETLRARHEEAE
                     LIFRRVGITFAVYGDDDGTERTIPFDIVPRVFPAEEWRHLKAGLIQRVQALNMFLQDV
                     YHDQKILKSGIVPADQVLGNTSYRRAMHGIDIPLNIYAHIAGIDLVRATHGDQAGQFF
                     VLEDNLRVPSGVSYMLENRKMMMRLFPDLFSTHQIAPVDHYPDLLLSALQQVAPPTDR
                     YSNVVVLTPGMYNAAYFEHAFLAQQMGVELVEGQDLYVDADDVVYLRTTQGPRRVDVI
                     YRRVDDDFLDPEIFREDSVLGPAGLMRALRAGNVSICNAVGTGVADDKSIYPYVPEMI
                     RFYLSEEPILNNVPTYMCRRPDELSYVLANLKELVVKEVHGAGGYGMLIGPTASKAEI
                     EAFRQQLVANPDHYIAQPTLSLSTCPTFVGAGVAPRHIDLRPFVLSGKDVRMVPGGLT
                     RVALKEGSLVVNSSQGGGTKDTWVLQSAGES"
     gene            2885..>3998
                     /locus_tag="VIC30_01120"
     CDS             2885..>3998
                     /locus_tag="VIC30_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011830137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEY7803030.1"
                     /translation="MPESDNAVHPTPSIKPQGHDWLASICTAIPLAQPGHYDELHANA
                     TSMRGPWAKLFSAIGPQALVELADSAKTVQRVIAENGITYNVFVDKQDQVRPWSLSPL
                     PMVIEPEDWQHIEAGLAQRAKLLNKIVRDVYHDRDLLASTYLPSALVLGNPSYLHAMQ
                     GVKVPDDIYLHVIAFDLARDEHGQWWVIGQRTQSPSGLGYVLENRLIVSRLFPQAYRD
                     MRIQHLASSYQRLLGALETQARHIAHGAPRFVFLTPGPYSETYFEHAYLARYLGIPLV
                     EGPDLTVRNDQLFLKTVHGLQRIHGLMRRLDDDFCDPLELRADSAIGIAGLLQVVRAG
                     NVVMANALGTGFLESPAIQGFLPALSEHLLGEPLIMP"
BASE COUNT          970 a         1100 c          976 g          952 t
ORIGIN      
        1 taccgcctcg tagcaccaaa ggtcaaagag tttgaacatg cgctgattgt agaagctact
       61 ttaggttcta acgcgcacac ggcttggaaa ctacccagat tggcagattg ccattcagac
      121 cgattccgct ggttcgggtg cggcaattgg tactaaaaag tggtggctaa tgtctagcgc
      181 caactgatta atacccgcca agaaagtcag caaatactcg tgcaaacctt ggccaaacac
      241 ctcgtcgatt tccatgtctt tgagttgtgc caacattgac cgagcttcat gctcggtgcg
      301 accagagctc gcattacgca ctttggtcaa tagctcgaca atttgctcca tacaagcaac
      361 cagtgaacga gggttgcgcg gacttaatat cagcagatca gcaacccgtg tgggcgtgat
      421 ggcatcacga aacatcatgc ggtagttctc aaatgctgag agcgagcgta agatcgcggc
      481 ccaatagtaa aagtcctcaa catgttcgag gtcttgttcc atgtgctcag ctgccgccag
      541 aaacttcaca tcaagcaaac gcgccacgtt gtctgctctt tcaatgaaga tacccagact
      601 aatgaaatgc gaggcctcgt cacgcatcat agtgcctatg tgcacaccac gcgattgatt
      661 cgagcgcaat ttgacccact caaagaagtc cgtgggcgca atccgaagca agccttgacc
      721 gacctggcgc tgggcatcga gccaagtggt gttgaccgtc tcccacaaat cagtggtcat
      781 cgatccccgg actgcacgtg cgttttctcg ggcggctctt aggcaactca tgatcgatga
      841 gggattgtcg gtgtcttgca ccatataggt cagcacattg gccggggttg cgttggcata
      901 ctttgcatca aagtcagctg tcaattcaga aatctcgagc atggctcgcc aggctgcgcg
      961 tgctgcctgc tctgattgcg gcaacagcga catctgccaa ttcacttcaa gcattcgtgc
     1021 ggtgttttct gcgcgctcgg tgtagcgcga catccaataa agatgatcag cagtacgtga
     1081 caacatgctt atgactctcc ggctgattgc aagacccaag tgtctttggt accgcccccc
     1141 tgcgatgagt tcaccacaag agaaccctct tttaaggcca ctctggtcaa accaccaggc
     1201 accattctga cgtctttgcc ggacaacaca aagggcctca gatcaatatg gcggggtgcc
     1261 acgcctgcac ccacgaacgt tgggcaagtc gacagactta aggtcggttg cgcgatgtag
     1321 tgatcggggt tagcgaccaa ctgttgccgg aatgcctcga tttccgcttt tgatgcagtc
     1381 ggaccaatca gcatgccgta tccacctgca ccgtgcactt ctttgacaac cagttctttt
     1441 aagtttgcca acacatagga aagctcatcg ggtcgacggc acatataggt gggcacatta
     1501 ttgagaatcg gttcttcgct aagataaaaa cggatcatct ctgggacgta ggggtaaatc
     1561 gacttgtcat ctgctacgcc agtacccacg gcattgcata tcgagacatt accggcgcgc
     1621 aacgcgcgca tcagccctgc cggtcctaaa acagaatcct cgcgaaaaat ttcaggatcc
     1681 agaaagtcat catcgacacg acgatagatc acatccaccc ttctggggcc ctgcgttgtg
     1741 cgtagataca caacatcatc ggcatcaacg taaaggtctt gtccttcgac taactcaacg
     1801 cccatttgtt gggctaagaa agcatgttca aagtaagcag cgttatacat gccgggcgtt
     1861 aagaccacca cattgctgta acggtctgtc ggtggggcta cttgctgcaa ggcacttagc
     1921 aacagatcag gataatgatc gaccggtgca atctgatggg tgctgaataa atcaggaaat
     1981 aaccgcatca tcatcttgcg gttctccaac atataagaca cgccagatgg cacccgaagg
     2041 ttgtcttcaa gtacgaagaa ctgtcccgcc tgatcaccgt gagtggcacg tacgaggtca
     2101 atgccggcaa tatgggcgta gatatttaat ggaatatcga tgccgtgcat ggcgcgcctg
     2161 taactcgtat taccaagcac ttgatcggcg ggcacgatac cggatttgag gatcttttga
     2221 tcgtgataca catcctgcaa aaacatgttt aacgcttgca cgcgctgaat cagacccgct
     2281 ttgagatgtc gccattcctc ggccggaaac accctgggca caatgtcaaa cggaatcgtg
     2341 cgctcggtgc cgtcatcgtc accatagaca gcgaatgtga tgccgacacg cctaaaaatg
     2401 agttcggctt cttcgtgacg cgctcgcagc gtctccatgt tttggtcaga caaccatgtc
     2461 tgcagttgcc ggtaatgcaa acgcactggc gcgccggcgt agccagacgc gatatcggcc
     2521 atcgacatca gcatctcatc gaacgcagaa tctgtactct tgttcaagcg atctcacctt
     2581 gactttaaaa agacacacaa cgcttacgcg gcctctgttc acatcaagtt gttagcaaaa
     2641 gctatgccac gaatgactta gggctattct ggcatagtta ttgctcgccc tgactaagcg
     2701 tatacccatc tgttttaatc acgccccagc gcagggcaac gcttgtgcac catcatctaa
     2761 cccatgatgg tgaaaaacgc accaaaatgg ttcacacatg gctcgctctg gttcgcttta
     2821 gaatatcttt gggaactagg aagcatgatt tgactcaacc cacttatctt cgagctgctt
     2881 gaccatgcct gaatctgaca atgctgttca tccaacaccg tcaatcaagc cgcaaggtca
     2941 tgactggctg gcatcgattt gcaccgcgat accgttggcc caaccggggc actacgacga
     3001 attacacgcc aacgctacat cgatgcgcgg gccgtgggcc aagctttttt cagcgatcgg
     3061 tccgcaagcg cttgtcgagc tggccgattc agcaaaaacc gttcagcgcg tgatcgctga
     3121 aaacggcatt acctacaatg tctttgtcga caagcaagat caagtcagac cctggtcact
     3181 aagccctttg ccgatggtca tcgaaccaga ggattggcaa catatcgagg ctggtttggc
     3241 ccagcgtgca aaattactca acaaaatcgt tcgcgatgtc tatcatgatc gcgacttgct
     3301 ggcttcgact tatctgccta gtgcgttggt actgggcaac cccagttatt tgcatgccat
     3361 gcaaggcgtc aaagtgccag atgacatcta cctgcatgtc attgcctttg atctggcgcg
     3421 tgatgaacat ggtcaatggt gggtcattgg gcagcgcaca caatcaccct ctggcctcgg
     3481 ttacgtcctg gaaaaccggt tgattgtttc tcgcttgttc ccccaggctt acagggacat
     3541 gcgcatccaa catctggctt caagctacca gcggctgctc ggcgcactgg aaacccaagc
     3601 cagacacatt gcacacggcg cccctaggtt cgttttttta accccgggtc cttatagcga
     3661 gacatacttc gagcacgctt acctagctcg ctacctcggg attccgttgg ttgaaggccc
     3721 cgacctgacc gtgcgcaatg atcaactctt tctaaaaaca gttcacggtc tgcaacgcat
     3781 ccacggtttg atgcgtcggc ttgacgatga cttttgtgac ccactagaac tgcgcgctga
     3841 ctctgctatt ggaattgccg gcctgctgca agtcgtacgc gccggcaacg ttgtgatggc
     3901 taatgctttg ggaaccggct ttttggagtc acctgccatt cagggttttc tgccggcttt
     3961 atccgaacac ttgctcggtg aaccactcat catgccct
//
LOCUS       DATBNL010000067         3255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_170249, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000067 DATBNL010000000
VERSION     DATBNL010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170249"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1215)
                     /locus_tag="VIC30_01125"
     CDS             complement(1..1215)
                     /locus_tag="VIC30_01125"
                     /inference="COORDINATES: protein motif:HMM:NF017634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene cyclase family protein"
                     /protein_id="HEY7803031.1"
                     /translation="MSQPTVVDLAILGGGCAGLSLASELASSLARGLDKRQVNRTVAV
                     IEPRTTYEDDRSWCFWASDAVPYSDSIFSHIHHRWQHWQFGLAGQSVNTRQSPGLSYQ
                     YLRSADFYQACSDRIAANDSVQLHLGQSVQTVLPVTAGWQITTDRQTFIAREVVDTRP
                     PPLEQRSQATLQQVFLGVEIELSAPEHATTDSVELMTDMRLVNDEFCFTYVLPYSPTR
                     LLVEVTFFARTIPDMAVLETTLNELLAARGWSDARIVRRESASLPMGLPGVADKPGQP
                     VQAGMGGGALRASSGYGFLRIQRWAKRCAAHYLATGNVVGHPKPGIGWQWMDQLFLDV
                     IAHEPALAPDLFDRLLGRTEPARFVRFMNDEATLLDCLKVIGCLPKRPFLRAFVRRVM
                     PKRLLATMKARA"
     gene            complement(1212..2159)
                     /locus_tag="VIC30_01130"
     CDS             complement(1212..2159)
                     /locus_tag="VIC30_01130"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HEY7803032.1"
                     /translation="MTNITNLTTMTDDQAMSVLQSNGRSFYFASRLLTPTHRARAARL
                     YAFCRFVDDIADETADRGQAATELDEIKAAIRACHSHEPCVANMLSLMQEASIPQEPV
                     MALIDGVRSDVRLVSIRSEAELVRYAYQVAGTVGLMMSMLLDVHDRDAWPFAIDLGIA
                     MQLTNIARDVGEDAQKGRVYLPSAWVGEVNVGDMDSPDDATAATLRQGTQRVLAMAED
                     YYNSGLSGVGYLPSSARYGIVVAAMVYREIGQVIAEMDYQTWGARAVVPHTRKLMCAS
                     KALTGHAIHNFANSSGAIHDGRLHEHLQDCFGADTAALA"
     gene            complement(2171..>3255)
                     /gene="crtI"
                     /locus_tag="VIC30_01135"
     CDS             complement(2171..>3255)
                     /gene="crtI"
                     /locus_tag="VIC30_01135"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010401579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016166 - phytoene dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phytoene desaturase family protein"
                     /protein_id="HEY7803033.1"
                     /translation="GFTKLSDRPFHSMGFMFAQVPHLARLGAWRTVWQMVCRYLESDY
                     LRQAFSIQPLLVGGNPFDTTSIYGLIHFLEQAHGVHFAMGGTGALVDAIETLMVEQGI
                     EIRLNSTVTSMSLADGSISTVQVQDAQGSTEVLKADWVVSNTDPAHLYKDLLPSQGVN
                     WLAKVKSDRWRKSMGLFVLFFGTKRQYPDVAHHTIWMGPRYEGLLNDIFNRKVLADDF
                     SIYLHRPTATDASFAPAGGDSFYALVPVPNLQANIDWQTKGPELAARVIHALGQRTLP
                     GLSEQIVDQFFMTPVDFQDRYLSPDGAGFSVSPIFTQSAWFRFHNRGEGPKNLFLVGA
                     GTHPGAGLPGVVSSAKVFERLLPMAT"
BASE COUNT          805 a          948 c          826 g          676 t
ORIGIN      
        1 tcatgctctg gccttcatgg tcgccaatag acgcttaggc atcacccgcc tgacaaatgc
       61 tcgcaaaaac gggcgtttgg gcaagcaacc aatcaccttc agacagtcga gaagtgtggc
      121 ctcatcattc atgaaacgca caaacctcgc gggctcggtt cgacccaaca gccgatcaaa
      181 caagtcaggt gctaacgcgg gctcatgggc aatcacatcc agaaacaact gatccatcca
      241 ttgccagcct atacctggtt tggggtgacc caccacgttg cctgtggcga gatagtgtgc
      301 cgcacaacgc ttagcccaac gctggatccg taaaaagcca tatccagagg acgcacgcaa
      361 agcaccccca cccatgccag cttgaacagg ctgacctggc ttgtcagcaa cgccaggcaa
      421 tcccatgggt aaggaagccg actcgcgacg gacaatacgt gcatcgctcc atccgcgagc
      481 tgctaatagc tcgttcaagg tggtttccaa caccgccata tcaggaatcg ttcgggcaaa
      541 gaatgtcact tccaccaaca gtcgcgtggg gctatatggc aagacgtacg taaaacagaa
      601 ctcatcgttg actaaccgca tatcggtcat cagttcgacg ctatcagtgg ttgcatgctc
      661 aggtgcggac agctcgattt ccacgcccag aaacacctgc tgcagtgtcg cttgcgagcg
      721 ttgctccagc ggcggcggtc tggtgtcaac gacctcgcga gcaataaagg tttgtctgtc
      781 tgtcgtgatt tgccagccag ccgtgaccgg tagaacggtc tgcacagact gcccgagatg
      841 caattgcact gaatcatttg ctgcaatgcg atcgctgcat gcctgataga aatcagccga
      901 tcgcaagtat tggtaactca gcccggggga ttggcgggtg ttgacagatt ggcccgctag
      961 accaaactgc cagtgttgcc aacggtgatg aatatgcgag aagatagaat ccgaatatgg
     1021 caccgcatct gacgcccaaa agcaccagct acggtcatct tcgtaagtcg tgcgcggttc
     1081 aataaccgcc accgtgcgat tgacctggcg cttgtctagc ccgcgtgcca gtgagcttgc
     1141 tagttcactg gccagggata gaccggcgca accaccgcct aggatggcta agtcaacgac
     1201 agttggttga ctcatgccaa tgccgctgta tcggctccga aacaatcctg caaatgctca
     1261 tgcaaccgtc catcgtgtat cgcaccgctc gagttcgcga agttatgtat cgcatggccc
     1321 gtcaacgcct tagatgcaca catgagtttg cgagtgtggg gcacgacagc tcgggcaccc
     1381 catgtctgat aatccatctc ggcaatgact tgaccaatct cacgatacac catcgctgcc
     1441 accacaatgc cataacgcgc tgagctcggc aaatagccca caccggacag accgctgttg
     1501 taatagtctt cggccattgc taacacgcgt tgtgtgccct gtcgcagggt ggccgcagtc
     1561 gcatcatctg gactgtccat gtcgccgacg ttgacctcac cgacccacgc actgggcaaa
     1621 tagacacgac ctttttgtgc atcttcgccc acatcacggg caatattcgt tagctgcatg
     1681 gcgataccca gatcaatagc aaagggccaa gcgtcacggt catgcacatc tagcaacatg
     1741 ctcatcatca aacccacggt acctgcgacc tgataggcgt atcgcaccag ttcggcctca
     1801 gacctaatgg atacgaggcg cacatcggag cgcacaccat caatcagcgc catgactggt
     1861 tcttgcggta tcgatgcctc ttgcatcaat gacaacatgt ttgcaacgca gggctcgtgc
     1921 gaatgacacg cccgaattgc tgccttgatc tcgtcaagtt cggtcgcagc ctgcccccga
     1981 tctgcggttt catcggctat gtcatcgacg aaccgacaaa acgcatacag cctggccgca
     2041 cgcgcccggt gcgtgggcgt taacaatcga ctagcaaagt aaaaactgcg cccattagac
     2101 tgcaacaccg acatggcttg atcgtctgtc atggtagtca ggttggtgat gttagtcatg
     2161 tcgctatccc ctaagtggcc ataggcaata aacgttcaaa cactttggct gatgacacca
     2221 cgccaggcaa ccctgcgccc ggatgtgtgc cagcacccac cagaaacaga ttctttggac
     2281 cttcaccacg attgtgaaac cgaaaccacg cggactgggt aaaaatcggt gataccgaaa
     2341 aacccgcacc atcgggtgat aaataccggt cctggaaatc caccggggtc ataaagaact
     2401 gatcgacgat ctgctcgctc aacccaggca gtgtgcgttg gccaagcgcg tgaatcacac
     2461 gcgcggctaa ctcaggtcct ttggtttgcc aatcgatgtt ggcttgcaag ttcggtacag
     2521 gcaccagcgc atagaagctg tcaccgccgg ccggggcaaa actcgcatct gtggccgtag
     2581 gccgatgcaa atagatagag aagtcatcgg ccaacacctt gcggttaaag atgtcgttaa
     2641 gtaagccctc atagcgcggg cccatccaga tggtgtggtg ggccacatcg ggatactgcc
     2701 gcttggtacc aaagaacagt acaaacagcc ccatggattt gcgccagcga tcagacttaa
     2761 cctttgccaa ccagttcacg ccttggcttg gcaataagtc tttgtagagg tgcgcagggt
     2821 ctgtgttgga taccacccaa tcggctttca aaacctcagt gcttccctgt gcgtcttgta
     2881 cttgtaccgt cgagatagac ccatcggcca gtgacatgga agtcacggtg ctgtttaacc
     2941 gtatctcgat gccttgctcg accatcaagg tctcaatggc atcaacgagt gcgcccgtgc
     3001 cacccatggc aaagtgcacg ccgtgggctt gctccagaaa atgaatcaga ccgtaaatcg
     3061 acgtggtatc aaacgggttg ccaccaacta acagtggttg aatagaaaac gcctgacgca
     3121 aatagtcact ttccaggtaa cggcaaacca tttgccagac cgtgcgccaa gcgccaagcc
     3181 tagccaagtg cggcacctgg gcaaacataa accccatgct gtgaaatggt cgatccgaca
     3241 gtttggtaaa tccga
//
LOCUS       DATBNL010000068         3205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_30773, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000068 DATBNL010000000
VERSION     DATBNL010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30773"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VIC30_01140"
     CDS             <1..261
                     /locus_tag="VIC30_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014840644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uL15 family ribosomal protein"
                     /protein_id="HEY7803034.1"
                     /translation="YRRLPKRGFTSRDQHLYAQIRLSDLQKLPVEEVDVQALKQAGVI
                     AQAVKYVKVFKSGELSRKVTLQGMTATAGAKAAIEAAGGSVA"
     gene            275..1597
                     /gene="secY"
                     /locus_tag="VIC30_01145"
     CDS             275..1597
                     /gene="secY"
                     /locus_tag="VIC30_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013397001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEY7803035.1"
                     /translation="MATQAIGKAGAKYGDLGRLLGFLVLALIVFRLGTHIPVPGINPE
                     VLADLFRQNEGGILGLFNMFSGGALSRFSIFALGIMPSISASIIMQLMSVVVPSLEAI
                     KKEGEAGRRKITQYTRYGTVLLALVQAIGISVALEAQPGLVIEPGVMFRLTTVVTLVT
                     GTMFVMWLGEQITERGVGNGISIIIFAGIVAGLPSALAGLFDLVRTNAMSILSAMFIL
                     VLVVLVTAFVVLVERGQRKITVNYAKRQVGNKMYGGQSSHLPLKLNMAGVIPPIFASS
                     IILFPATVSSWFASGENLTWLSDFAAALAPQQPLYITLYATAIIFFCFFYTALVFNSR
                     ETADNLKKSGAFVPGIRPGDQTARFIDKILTRLTLAGALYITLVCLLPEFLVMRWNVP
                     FYFGGTSLLIIVIVTMDFMAQVQAYMMSQQYDSLLKKANFKGGNLPAR"
     gene            1605..1823
                     /gene="infA"
                     /locus_tag="VIC30_01150"
     CDS             1605..1823
                     /gene="infA"
                     /locus_tag="VIC30_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018149800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEY7803036.1"
                     /translation="MSKDDVIQMQGEVLENLPNATFRVKLENGHVVLGHISGKMRMHY
                     IRILPGDKVTVELTPYDLTRARIVFRSK"
     gene            1856..1969
                     /gene="rpmJ"
                     /locus_tag="VIC30_01155"
     CDS             1856..1969
                     /gene="rpmJ"
                     /locus_tag="VIC30_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEY7803037.1"
                     /translation="MKVMASVKRICRHCKIIKRHGVVRVICTDPRHKQRQG"
     gene            2006..2371
                     /gene="rpsM"
                     /locus_tag="VIC30_01160"
     CDS             2006..2371
                     /gene="rpsM"
                     /locus_tag="VIC30_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018440462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEY7803038.1"
                     /translation="MARIAGINIPPHQHAEIGLTAIFGIGRTRSRKICEAAGVPLNKK
                     VKDLNDSELERIREHVGVFTIEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVHGQRT
                     RTNARTRKGPRRAAASLKK"
     gene            2384..2782
                     /gene="rpsK"
                     /locus_tag="VIC30_01165"
     CDS             2384..2782
                     /gene="rpsK"
                     /locus_tag="VIC30_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010106947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEY7803039.1"
                     /translation="MAKASAGASRVRKKVKKNVSDGIAHVHASFNNTIITITDRQGNA
                     LSWATSGGAGFKGSRKSTPFAAQVAAESAGRVAIECGIKTLEVRIKGPGPGRESSVRA
                     LNALGIKISSIADITPVPHNGCRPPKRRRI"
     gene            2794..>3205
                     /gene="rpsD"
                     /locus_tag="VIC30_01170"
     CDS             2794..>3205
                     /gene="rpsD"
                     /locus_tag="VIC30_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012415762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEY7803040.1"
                     /translation="MARYTGPKCKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRT
                     SGARLSDYGLQLREKQKLKRMYGVLEKQFRKYFAEAERVRGNTGETLIQLLESRLDNV
                     VYRMGFGSTRAEARQLVAHGAIEVNGRASDIPSMI"
BASE COUNT          747 a          767 c          870 g          821 t
ORIGIN      
        1 taccgtcggt tgcccaagcg tggttttacg agccgtgatc agcatttgta tgcgcagatc
       61 cgcttgtctg atttgcaaaa gttgcccgtc gaagaagttg atgtgcaggc gttgaagcaa
      121 gcaggcgtaa tcgctcaggc agttaaatat gtgaaagttt tcaagtccgg tgagttgagc
      181 cgcaaggtga cactgcaggg catgaccgca accgcgggtg ccaaggcagc gatcgaagct
      241 gccggcggct cggtggcctg aggcgaggtg taatttggct acacaggcaa tcggtaaagc
      301 aggagccaag tacggcgacc tcggtcgtct tctaggattt cttgtgcttg cacttattgt
      361 tttccggttg ggaacacaca tccctgtgcc gggtatcaat ccggaagtgc ttgccgactt
      421 atttcgtcag aacgaaggcg ggatattagg tctgtttaat atgttctcgg gcggtgcatt
      481 atcgagattc tcgatttttg cgctcgggat catgccttcc atttctgcat cgatcatcat
      541 gcagttgatg tcggtcgtgg ttccctctct tgaagctata aagaaagaag gcgaggctgg
      601 tcgccggaaa attacgcagt acacacgcta cggcacggtg ttgttggcgt tagttcaggc
      661 aatcggtatt tcagtcgccc ttgaggctca accagggctc gtgattgagc ctggcgtcat
      721 gtttagattg accacagtcg ttactttggt caccggcacg atgtttgtga tgtggttggg
      781 tgagcagatt actgaacgag gcgttggcaa cggtatctca atcattatct ttgccggtat
      841 tgtggctggg ctaccctccg cattggccgg gttgtttgac ttagtacgta ccaatgctat
      901 gtcaatcctg tcggccatgt ttattttggt attggtggtg ctggtgacag catttgtagt
      961 gctggttgag cgtggtcaac gtaagattac ggtgaactat gccaagcgcc aggtcggaaa
     1021 taagatgtat ggtgggcagt cttctcattt gcccttaaag ttgaacatgg caggcgtaat
     1081 tccgccgatt ttcgcgtcat ccatcattct ttttccggcg acagtgagta gttggtttgc
     1141 aagcggcgag aaccttacat ggttgagtga ttttgccgcc gctttggcac cacagcagcc
     1201 tctctacatc acgctttacg cgaccgccat tattttcttt tgcttttttt acacggcctt
     1261 ggttttcaat agtcgtgaaa cagcagataa ccttaagaaa agtggcgcgt ttgtacctgg
     1321 tattcgtcca ggagatcaaa cagcccgttt tattgacaag attttgaccc gtttgacgtt
     1381 agctggtgcg ctgtacatca cattggtctg cttgctaccg gaatttttgg tgatgcgttg
     1441 gaatgtaccg ttttacttcg gcggaacatc cctactcatt attgtgattg tcacgatgga
     1501 ctttatggca caggtgcaag cctacatgat gtcccaacag tatgattcac tgctcaagaa
     1561 ggcgaacttc aagggcggga atctaccagc gagataagta acagatgtca aaggacgacg
     1621 ttatacaaat gcagggcgag gttcttgaga acctgcctaa tgcgactttc cgcgtcaagc
     1681 tagagaacgg ccatgtagtg cttggccata tatccggcaa gatgcgcatg cactacatca
     1741 ggattcttcc tggcgacaag gtcacagtgg agctcacgcc ctatgacctc accagggcta
     1801 ggattgtgtt ccgatccaaa tgatcggaac tagtaaagga ctataggagt caaccatgaa
     1861 agtaatggca tcggttaagc gaatttgcag acactgcaaa attattaaac gtcacggcgt
     1921 cgtacgtgtt atctgcacag acccgcgtca caagcagcgt cagggttaaa cctgttcgcc
     1981 atacgtatat atctgaggaa aagccatggc ccgtattgct ggcatcaaca ttccgccaca
     2041 tcagcatgct gagatcggtc tgaccgccat ttttggtatc ggacgtaccc gctcacgtaa
     2101 gatttgcgaa gcagctggtg tgccgttaaa caaaaaagtt aaagatctga acgattcaga
     2161 gcttgagcgt attcgtgaac acgtcggtgt attcaccatt gaaggtgatc tgcgccgtga
     2221 ggttcagctc tcaatcaaac gcttgattga tctaggaacc tatcgcggta tgcgccacaa
     2281 gcgtggcctg ccagttcatg gtcaacgtac ccgcaccaac gcacggaccc gtaaaggtcc
     2341 gcgtcgtgcc gcggccagcc tgaagaaata aggggattgc aaaatggcta aagccagtgc
     2401 aggcgcatcg cgagtgcgca agaaagtcaa aaagaacgta tccgacggta ttgcacacgt
     2461 gcatgcgtcg tttaacaaca ccatcatcac gatcaccgat cgtcagggca atgctctgtc
     2521 gtgggcaacg tctggcggtg caggttttaa gggttcacgt aaatcaacac cctttgctgc
     2581 gcaggttgca gctgaatctg ccggtcgcgt cgcgatcgag tgtggtatca aaacactgga
     2641 agtgcgcatc aagggtcctg gtccaggtcg ggagtcctcc gttcgcgcac tgaatgcgct
     2701 cggcatcaag atttcgagca ttgcggacat cacgccagtg cctcacaacg gctgccgtcc
     2761 gcccaagcgt cgtcgtattt aaggaataga gtcatggcac gttataccgg tcccaaatgt
     2821 aaactctcgc gtcgcgaggg cactgatttg tttctcaaga gcgcacgtcg ctcgttagat
     2881 tcaaagtgca agctcgactc caagcctggt cagcatggcc gcacctctgg tgcccgactg
     2941 tctgattacg gcttacagtt gcgtgaaaag caaaagctca agcgcatgta tggtgtgttg
     3001 gagaagcagt ttcgcaaata cttcgcagaa gctgaacgcg tacgcggcaa cacgggtgag
     3061 accctgattc aattgctgga atcacggttg gacaacgttg tgtaccgtat gggttttggc
     3121 tcgacacgcg cagaagctcg tcaattagtc gcgcatggcg ctatcgaagt gaatggccgc
     3181 gcttcggata tcccttcgat gatca
//
LOCUS       DATBNL010000069         4534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10878, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000069 DATBNL010000000
VERSION     DATBNL010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4534
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10878"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            544..1338
                     /locus_tag="VIC30_01175"
     CDS             544..1338
                     /locus_tag="VIC30_01175"
                     /inference="COORDINATES: protein motif:HMM:NF018928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SapC family protein"
                     /protein_id="HEY7803041.1"
                     /translation="MAITPISQSAFGTKRFKRYKSYQFAAKDSIAPLVLKELVRACTV
                     TPIGFARVQDVFVPVAVLGLGNDTNLFVAPDGRWIGRYVPAAYRSYPFVLANGPEDKK
                     ILCFDESSGLLTETEGEPFFNDDGKPTDSINDVLNFLTQLDINRRATQRACSLLAEHN
                     LIEPWPITLTGEEQAPRRNLEGLFRVNEAAFNQLAERPLHALHQGGALPVIYCQLLSM
                     QHLPVLGELARAYQAAEQQAKLPKNQAGEIDLSFLADDTSISFENL"
     gene            complement(1957..2721)
                     /gene="istB"
                     /locus_tag="VIC30_01180"
     CDS             complement(1957..2721)
                     /gene="istB"
                     /locus_tag="VIC30_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013123998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEY7803042.1"
                     /translation="MPMTQIERTLRELRLSGIIATLETRIVQAQSSSQPFIETFSMLL
                     QDEIDQRRSRLLDRRYKKSGLDERATLVDFDWRFNPKLPRAACFDLHTLKFISEGANA
                     LIIGKPGTGKSHVAKAVAYQATLQGYHVRYVETDTAFSKYSLASETEQAQILSSLLEP
                     DLLVLDDLFLSRRIADTSAELLQAVVHQRYKLRRSIVITSNRVVQDWGKYLGDNTMSG
                     TILDRLMHRCSLLEFEGKSYRLKEAAARLARSSKDD"
     gene            complement(2724..4316)
                     /gene="istA"
                     /locus_tag="VIC30_01185"
     CDS             complement(2724..4316)
                     /gene="istA"
                     /locus_tag="VIC30_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011486179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEY7803043.1"
                     /translation="MNVLKPHLQTTLLTLLASNTSQHEIARVTKIDRKTIRAYAKRWH
                     EQQANSPGVATGSADQIPPPRPPEKAPKRSVSACEPHREFIQEQLKLRRNYTAIYQDL
                     VDIYGFSGAYNSVKRFAGKLCQSDPVQYDRLEFEPAEEAQVDYGEGAMTRVPGTERYK
                     RPRLFIMTLRYSGRSFRRVVWKSSKKVWAELHEQAFRYFGGATKYVVLDNLKEGVSKP
                     DLYEPELNSVYAATLKHYGCVGFPARVRDPNRKGSVENAIGHTQATALKGRRFESIEE
                     QNDYLEHWETRWAAQRIHGGHKKQVQAMFEEERPLLKPLPIRGMEYFDEFVRTVCDDA
                     CIRVDHSSYAARPAQIHDKVLVRLFDKYLQIHDLQNQTLLRTHTRAQRRGTVVLPDED
                     RIFNPSTQTALIMKKAKEIGPQTLKLCETWFEREGRVGQRKLWGIVNLAKHNPKRMVE
                     QACEMALRDGVNSTQTVRTLVERLVADALAVLDTPRQGELSLTQAHPLIRSSDEYGDL
                     FEQATRQNAEQLLNHHPGDPTP"
BASE COUNT          944 a         1224 c         1284 g         1082 t
ORIGIN      
        1 acttttaacg ccgcccgaga cgtaccattg ccccgtatag gttcggtttt ttttgcagcg
       61 acctaggagg tatgtctttg gccttgcctt tggctgcctc gtagcacacc accttctagt
      121 cgggcccttt gaagtcgttc atggtcaatc ccatcacctc gttgcgtggg tccttcagga
      181 gtacgagggt tagatgctag agctgacctg ggaaatttaa tggacaccta gctgaggggg
      241 gctaattgtt gtaagagtta ccactgcacc gctcgtcttg cgccacagag ggacgccacg
      301 gcggcacctt gaataactcc tagccgacat tagggttaag aggactctca tgggacgatg
      361 gcatcaaagt gcccacaggt ggatggtagc ggtgatctcc acaggcaaac cggaggatcc
      421 gccgccgtgg acaagtctag agaaggtccc aaacacaaac attctgacag gcccgcaaag
      481 cgaagattat ttagcttcta caatgttcaa catcgtattt gccgttatta gaggacattt
      541 tttatggcga tcaccccaat ttcccagtct gcgttcggta ccaagcgttt taagcgttat
      601 aagtcctacc aatttgcagc gaaagattcg atcgccccac tggtactcaa agagctcgtg
      661 cgtgcatgca cagttacgcc gattggcttt gccagagtcc aggacgtatt cgtgcctgtg
      721 gcagtgctgg gccttggtaa cgacaccaac ctatttgtag cgccagatgg tcgttggatc
      781 gggcgctacg tgccagcagc ctatcggagc tacccattcg tgttggccaa tgggcccgag
      841 gacaagaaga ttctatgttt tgatgagagc agtggtttgt tgactgagac cgagggtgag
      901 ccgtttttca atgacgacgg caagcccacc gatagcatca atgatgtgct gaacttcttg
      961 acacagctgg atattaatcg ccgggcgacc cagcgggcgt gttcgctatt ggcagagcac
     1021 aacctgatcg aaccctggcc cattacgtta acgggcgagg agcaggcgcc cagacgcaac
     1081 cttgagggtt tgtttcgggt gaacgaagcg gcgttcaatc aattggcaga acggccgctg
     1141 catgccttgc accaaggcgg tgcgttgccg gttatttact gccagctgct gtccatgcag
     1201 catctgcccg tgctaggtga attagccaga gcctaccagg ccgccgagca gcaggctaag
     1261 ttacccaaga accaagctgg tgagattgac ctatcgtttc ttgcggatga caccagtatc
     1321 agttttgaga acctgtgacc tagactaagg agacacttga tccaggccac atttcagata
     1381 aggtttttgt cgagaagcga attccattgg caaccctccc atgtgtgagc accggtcacg
     1441 gtagaggcac tggttatctg gtgcccccgt acagatccgt acgtgcagaa tgaccgaatg
     1501 aggctctgct ccgggtgatc acgccaaagc gaaccacggg gtagggatat ttcggtacct
     1561 gccgtgggta ccttagatgc tggcgagcga tggttttcag ccggtcccac gccttgcggt
     1621 gcatctgatt atggcgccgt agcgcaagca gccagtgacg aaagacttca ccataaaact
     1681 gcgccatacg cttttcgtcg cctgtaaatc tggctgtact aaaccagccc gcgctctacg
     1741 actgcactaa gataaatagg atggtgctga aatggcttgg ctacgtacga gcttcagaga
     1801 gtcgacaatt ctgctggcag acctgccgca acgacccgat ctctaagtaa acaccacagt
     1861 cgatgcaacc gtgatgttta cttagagccc gaatggccac ttcaaattcc cccatctctg
     1921 gccggtcaaa ttcccccagg caggacgggt tgattatcag tcatctttgc tgctgcgcgc
     1981 aaggcgcgcg gcagcctctt taagtctgta actcttgccc tcgaattcca gcagtgagca
     2041 acggtgcatc agccggtcca ggatcgtgcc gctcatggtg ttatctccca gatatttgcc
     2101 ccagtcctga acgactcggt ttgaggtaat aacgatgctg cgtcgaagct tgtagcgctg
     2161 gtgcaccact gcttgcagca gttcggccga agtgtctgcg attcggcgag acaggaacag
     2221 atcgtctagc accaagagat cgggctccag caggctactc aggatctggg cctgttcggt
     2281 ttcgctggcc aggctgtact tgctaaacgc cgtgtcagtt tcgacgtatc gcacgtgata
     2341 gccctgtagg gtggcttgat aggcgaccgc cttggcgaca tgactcttgc ccgtgccggg
     2401 cttgccgatg atcaaggcat tggccccttc actgatgaac ttcaaggtgt gcagatcaaa
     2461 gcacgctgcc cgcggcagtt tggggttaaa gcgccagtca aagtccacga gcgttgcccg
     2521 ctcgtcgagc ccagactttt tgtagcgacg atcaagcaat cggcttcgac gctggtctat
     2581 ttcgtcttgt agcaacatag agaaggtctc tatgaatggt tggctactgg actgcgcctg
     2641 aacgatgcga gtctcaagcg tggcaatgat gcctgatagc cgtagttcgc gcaaagtgcg
     2701 ctcaatttgt gtcatgggca tgctcatggg gttgggtctc cggggtggtg gttaagtaat
     2761 tgttcagcgt tttgacgggt ggcttgttca aacaggtcac cgtattcatc actggatcgg
     2821 atcagagggt gcgcttgggt cagtgagagc tcgccctgac gcggggtatc gagaacggcc
     2881 agcgcatcgg ccacgagtcg ctcgaccagt gttctgacag tctgggtgct attgacccca
     2941 tcgcgtagtg ccatctcaca ggcctgctcg accattcgct tggggttgtg cttagccaaa
     3001 ttcacgatgc cccagagctt gcgctgaccg acacgcccct cgcgctcaaa ccaggtttca
     3061 cacagcttta gtgtctgtgg gccaatctct tttgcctttt tcatgatcag cgcggtctgg
     3121 gtcgaggggt tgaatatacg gtcttcgtct ggcaacacca ccgtgccccg tcgctgcgcc
     3181 cgggtgtggg tgcgcagcag cgtctggttc tgtaggtcgt gaatctgcag gtacttgtca
     3241 aataaccgga ccaagacctt gtcatggatt tgggccgggc gcgccgcgta actactgtga
     3301 tcgacccgga tgcaggcatc gtcgcaaacg gtgcgcacga attcgtcgaa gtactccatg
     3361 ccccgtatgg gcaagggctt gagcaacggc cgttcctcct cgaacatggc ctgcacttgc
     3421 tttttatggc cgccatgaat gcgttgcgct gcccatcgtg tctcccagtg ctctagatag
     3481 tcgttttgtt cctcaattga ctcaaagcgc cggcctttga gtgcagtggc ctgggtgtgg
     3541 ccgatggcgt tctccacact acccttgcgg ttgggatcac gaacccgggc gggaaagccc
     3601 acgcaaccgt agtgcttgag cgtggcggca tagacgctgt tgagctcagg ctcataaagg
     3661 tcgggcttac taacgccttc tttcaggttg tctaacacca cgtacttggt ggcaccgcca
     3721 aagtaacgaa aggcctgctc gtgcagttca gcccagacct tcttgctgga tttccagacg
     3781 actcgccgga aactgcgccc tgagtagcgc aaggtcatga tgaacagccg tggtcgtttg
     3841 taacgctcag tgcctggcac tcgggtcatc gcaccctcac cgtagtcgac ctgagcctcc
     3901 tcggccggtt caaactcgag ccggtcatat tgaaccgggt cggactgaca cagcttgcca
     3961 gcaaaccgct tcacgctgtt gtaggcaccg ctaaagccgt aaatatccac caggtcttgg
     4021 tagatcgctg tgtaattgcg tcgcaactta agctgctctt gaatgaactc gcggtgtggc
     4081 tcgcaggccg aaaccgatcg tttgggtgct ttctccggtg gccggggtgg gggaatttga
     4141 tctgcagacc cggtggccac cccgggggaa tttgcctgct gctcgtgcca gcgcttggca
     4201 tacgctcgga tcgtcttgcg atctatcttg gtgacgcgcg caatctcatg ctgactggtg
     4261 ttgctggcca gtagtgttaa caaagtcgtt tgtaagtgcg gtttcaagac gttcactcca
     4321 gttcccccta ttcaaggggg tcacagtaac gtcctgccgg taactgatgg ctagcgcgct
     4381 aaagcgcgcc actcagatgg gggattttga agtggccaag ggtgggggaa tttgggtggc
     4441 caaccgggat gtgccgaaac tcgacgttta catcccaaag agcgctttgc gagtctttaa
     4501 caatggccag tcgaaccttc aggcctaaag gttg
//
LOCUS       DATBNL010000070         2921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_150347, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000070 DATBNL010000000
VERSION     DATBNL010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150347"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1116)
                     /locus_tag="VIC30_01190"
     CDS             complement(<1..1116)
                     /locus_tag="VIC30_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006226342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY7803044.1"
                     /translation="MSHSRPAPLAGIRVLDLSRVLAGPFCAQTLADLGADVIKVERPG
                     TGDDTRAWGPPYVRDAQGNDTSDSAYFTSTNRNKRSIAIDIASPEGAAVVRKLASQCD
                     VLIENFKVGGLKKYGLDYESLQAEMPGLIYCSITGFGQTGPFAHRPGYDFMIQGMGGL
                     MSITGERDDLPGGGPQKAGVAVTDVFTGLYGAVAILGALRERDQSGLGQHIDLALLDC
                     HVAMLSNQNLNYMTSGQAPTRAGNAHQNVVPYQVFKTSDSFMILAVGNDSQFRAFCQV
                     VGHDEWASDPRFVTNSARIVNRVALIALIEAQMLTRTREDWMSALEAVGVPCGPIQTI
                     DQVFDHPQVKARELWREIGHPVAGTAPTTASPINYSAT"
     gene            complement(1172..2086)
                     /locus_tag="VIC30_01195"
     CDS             complement(1172..2086)
                     /locus_tag="VIC30_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013952331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803045.1"
                     /translation="MSDMLKDKVAVVTGAGGGIGREIALAMGRAGAKVVVNDIGASLN
                     GEGTADGPAQSVTDEIKAAGGAAVPNTDSVAERESAHNIIETAVEHFGRVDIVVNNAG
                     NLRDRVFHKMSEDEWRQVIDVHLNGTFFVSRAAANYFREQESGAFVHMTSTSGLIGNF
                     GQSNYSAAKLGIAALSKSIALDMNRYNVRSNCIAPFAWSRMTSSIPANTPEEKARVVK
                     LQKMEAGKVAPMAVFLASDQAKEVNGQIFAVRANEIMLFSQPRPVRSVHMSEGWTPEA
                     IAEIAAPAMKHHFMALERSPDAIDWDPI"
     gene            2418..>2921
                     /locus_tag="VIC30_01200"
     CDS             2418..>2921
                     /locus_tag="VIC30_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803046.1"
                     /translation="MDLSFNDQELAFREQVRDFTQKNLPADIRDKQMHHRRLAKDDYI
                     RWHRILAEHGWGAPNWPKEYGGTGWDAVQRLLFEIETFKAGAPRLLSFGLTMIGPVLM
                     KFANQQQKDYYLPRIITVEDWWCQGYSEPGSGSDLASLKTRAERVGDKYVINGQKTWT
                     TLGHHADW"
BASE COUNT          620 a          801 c          831 g          669 t
ORIGIN      
        1 tgtggccgag tagttgattg gacttgcggt cgtaggggcg gtgccagcca cagggtggcc
       61 aatttcacgc cataactcgc gcgccttgac ttgtgggtga tcaaatacct ggtcgatggt
      121 ctgaattggg ccgcaaggca cgcccaccgc ctcaagtgcg ctcatccagt cttcgcgcgt
      181 gcgggtcagc atctgcgctt caatcagcgc aatcagtgcg accctattga cgatgcgcgc
      241 gctgttggtc acaaagcgcg gatcacttgc ccattcgtcg tggcccacca cctgacaaaa
      301 cgctctgaat tgggagtcat tgccaacagc caaaatcatg aagctgtccg aggtcttaaa
      361 gacttgatac ggcaccacgt tctggtgcgc gttgccagcc cgcgtgggcg cttggcccga
      421 ggtcatgtag ttcagattct ggtttgacag catggccacg tgacagtcga gtaatgctaa
      481 gtcgatgtgt tgacctagac cgctttgatc gcgttcgcgt agtgcaccga gaatggccac
      541 cgcaccgtaa agaccggtga acacatcggt gactgctacg ccggcctttt gtgggccgcc
      601 accaggcagg tcgtcacgct cgccggtaat actcatgagc ccacccatgc cttggatcat
      661 gaagtcataa ccggggcggt gtgcaaatgg acccgtttgc ccgaatcctg tgatcgagca
      721 ataaatcaaa cccggcatct cagcctgcag gctctcgtaa tccagaccgt acttttttaa
      781 gccaccgact ttgaagttct caatgagcac atcgcactgg ctggcgagct tacgtacaac
      841 ggcagcgccc tcgggtgagg ctatgtcgat ggcaatcgac cgtttgttgc ggttggtgct
      901 cgtaaagtaa gccgaatcag acgtgtcgtt gccttgcgcg tctcgcacat agggtggacc
      961 ccaggcacgg gtgtcatcac cggtgcctgg gcgctcgacc ttaatgacgt cggcaccaag
     1021 atcagccagc gtttgggcgc aaaagggacc cgcgagtacc cgagataggt ccagcacacg
     1081 gataccggct agcggtgcag gtcttgagtg gctcatgctt tatttcccca aaaaaaatca
     1141 cagacagcat acgtcaactg acgactatcg attaaatcgg atcccaatca atggcgtcag
     1201 gtgagcgctc aagcgccatg aaatggtgtt tcatggcagg tgcggcgatc tccgctatgg
     1261 cctcaggcgt ccagccttcg ctcatgtgta ccgagcgcac cggacgcggc tgactaaaga
     1321 gcatgatttc attggcgcgc accgcaaaga tctgaccatt gacttctttg gcctgatcgc
     1381 tcgccaaaaa cacggccatg ggggcgactt tgcccgcttc catcttttgt agtttgacca
     1441 cgcgcgcttt ttcttccggc gtgttggccg gaatcgagct agtcatgcgg ctccaggcaa
     1501 atggggcaat gcaatttgaa cgcacgttgt agcggttcat gtccaaggca atcgacttcg
     1561 atagtgccgc aataccgagt ttggctgccg agtagttgct ctgcccaaaa ttaccgatca
     1621 acccagaggt tgaggtcatg tgcacgaagg cgcctgactc ttgctcacgg aaataattgg
     1681 cagccgcgcg gctcacgaag aaggtgccgt ttaaatggac gtcgatcacc tgacgccact
     1741 catcttcgct cattttgtgg aacacacgat cacgcaggtt gccggcgttg ttgaccacga
     1801 tatcaacgcg gccaaagtgc tcaacagcgg tctcaataat gttgtgtgcg ctttcgcgtt
     1861 cagccacgct gtcggtgttg ggtacagcag cgccgcctgc ggccttgatt tcatctgtaa
     1921 cggattgcgc cggtccgtcg gcggtgcctt caccgtttag tgacgcaccg atgtcgttga
     1981 ccacgacttt agcgccagcg cgccccatgg ccaatgcgat ttcgcggccg atgccaccgc
     2041 cagcgcctgt gaccacggct actttgtctt tcaacatgtc gctcatccat atctcctttg
     2101 tgacgttgtg tttgtctcgt gctcaatgaa aagggtgatg gttggtttgc gatcacacct
     2161 taattgcctc atatcctagc ggcttggcgg ggtcgatggg caagtcgggg tgtttgtgtt
     2221 tgctgagtgc tcgcttgcgt tggcacgaat ggttgagacc aatggttggc gagcgcgatt
     2281 ggcacgaacg ccaacgttgc agcgcaacat agatgtcggt tttatcggtt taggacggtc
     2341 gaattcggca ttccaaaatc ggatactccc acaggtgcgc caagttggta cattcggttg
     2401 taaaggagag cgtaaccatg gacttgagct tcaatgacca agagctcgcg tttcgcgagc
     2461 aggtacggga tttcacacaa aagaacttgc cggccgatat ccgcgacaag caaatgcacc
     2521 atcgtcgcct agccaaagac gactacattc gctggcaccg gatcctcgct gaacatggct
     2581 ggggtgcgcc gaattggcca aaggaatacg gcggcacggg ttgggatgcc gtgcaacgac
     2641 tgttgttcga gattgagacg ttcaaggcgg gcgcaccgcg tttgctgtcg tttggtctga
     2701 ccatgattgg cccagtgctg atgaagtttg ctaatcagca acaaaaagac tactacttgc
     2761 cgcgcatcat caccgttgaa gattggtggt gccagggcta ctcagaaccg ggttccggct
     2821 ctgatctggc ctcactgaag acccgggctg agcgcgtggg cgataagtac gtgatcaatg
     2881 gacaaaagac ctggaccacg ttgggtcacc acgccgattg g
//
LOCUS       DATBNL010000071         1949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70624, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000071 DATBNL010000000
VERSION     DATBNL010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70624"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VIC30_01205"
     CDS             <1..736
                     /locus_tag="VIC30_01205"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEY7803047.1"
                     /translation="AVLENAAREPEVIDLAELLIKMGARITGHGTDRIVVQGVDRLHG
                     AEHRVMPDRIEAGSFLCAVAATGGEIELKRVAPATMGATLSKLTEAGLLLDVTEDSIV
                     ARMSVRPKAVDIRTHEYPGFATDMQAQFMALNTVAEGTAMVVETIFENRFMHVQELIR
                     LGADIEIDGHTAVVRGVSGLSGATVMATDLRASASLVIAGLVAQGETIVERIYHLDRG
                     YMNMENKLSALGAQIERISSKGAAHD"
     gene            729..1391
                     /gene="hisG"
                     /locus_tag="VIC30_01210"
     CDS             729..1391
                     /gene="hisG"
                     /locus_tag="VIC30_01210"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEY7803048.1"
                     /translation="MTETANRPVTLALSKGRIFDETLPLLKAAGIEVSEDPEKSRKLI
                     IGTNRPDVRLIIVRASDVPTYVEYGAADLGIAGKDVLIEHAATHPGALYQPIDLNIAR
                     CRLCVAVPKGFDYEAAVRQGARLRVATKYVSAAREHFARKGVYVDLIKLYGSMELAPL
                     IGLADAIVDLVSTGNTLKANNLVAVEDIMPISSRLIVNRAALKTRQGQLQPILDAFEQ
                     AR"
     gene            1442..>1949
                     /locus_tag="VIC30_01215"
     CDS             1442..>1949
                     /locus_tag="VIC30_01215"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY7803049.1"
                     /translation="MAVVNRLSTQDPGFDQTLTALLHVNAAEDDAIESAAAGILQAIR
                     IEGDAALLRYTQQFDRVSTSSVAELEIPRRAWQAALDELPAAQRRALEEAAERIRSYH
                     ERQKQDSWTFTEANGTVLGQKITPLDRGGLYVPGGKAAYPSSVLMNVIPAKVAGVTEV
                     IMVTPTPDG"
BASE COUNT          428 a          502 c          577 g          442 t
ORIGIN      
        1 ggcggtatta gagaatgcgg cacgtgaacc tgaggtcatc gacttagctg agttgttaat
       61 caaaatgggt gcccgcatca ccggtcatgg cactgacagg atagtggttc aaggcgttga
      121 tcgcttgcac ggtgccgagc accgtgtcat gccagaccgc attgaggccg gcagcttcct
      181 gtgcgcggtc gcggccaccg gtggtgagat cgagctcaag cgagttgccc cggctacaat
      241 gggcgcgacg ttgagtaagc taactgaagc gggtttgttg ctcgacgtga ccgaagactc
      301 aattgtggct cgaatgtcag tgcgccccaa ggccgtggac atcagaaccc atgagtatcc
      361 gggatttgcg acagacatgc aggcgcaatt catggctctg aataccgtgg cagaaggtac
      421 tgccatggtg gtcgagacga tttttgagaa tcgattcatg cacgtgcagg aactgattcg
      481 tctcggcgct gatatcgaaa ttgatggtca taccgctgtg gtgcgcgggg tatctggttt
      541 gtctggtgcc actgtcatgg ccacggactt gcgtgcttcg gcgagtctgg tgatcgccgg
      601 gcttgtggct caaggcgaaa cgatcgtcga gcggatctat catctggatc gtggttacat
      661 gaacatggaa aataaactga gtgcacttgg cgcacaaatt gagcggatat cgtccaaagg
      721 cgccgctcat gactgagaca gcaaaccgcc ctgtcacgct ggcgctgtcc aagggtcgga
      781 tatttgacga gacgttgccg ctcctgaaag cggccggcat tgaggtgtcc gaggatccgg
      841 agaaatccag aaagctcatt atcggcacca accgtcccga tgtgcgcctg atcatcgttc
      901 gcgcttccga cgtcccgacc tacgtggagt atggtgcggc cgatctcggt attgctggca
      961 aggacgtatt gatagaacat gctgccaccc acccaggcgc gctttatcag cctattgatc
     1021 tgaatattgc ccgttgccgt ctatgcgtgg cggtgcccaa ggggtttgat tatgaggccg
     1081 cggttcgtca gggggcacgc ctgcgtgtgg ccacgaaata tgtctcagca gcgcgtgagc
     1141 acttcgcgcg caaaggggtg tatgtcgatc taattaagct ctatgggtcc atggagcttg
     1201 caccgctcat tggtctagcc gacgccattg tcgatttggt ttccaccggc aacaccttaa
     1261 aagccaataa cttggttgct gtcgaagaca tcatgccgat ttcttcccgg ctgattgtca
     1321 accgcgcagc gctgaaaacg cggcaagggc aattacagcc aatccttgat gcttttgagc
     1381 aggctcgcta aaaagcctgc taagctttca tcctattatt tgataaattg agtaaacaga
     1441 aatggctgtc gtaaatcgcc tcagcaccca agaccctgga tttgatcaga cactcacggc
     1501 acttttgcat gtcaatgcgg ccgaagatga tgcgattgaa tctgcggcgg ccggcatcct
     1561 gcaggctatt cgtatagagg gcgatgcggc cttgttgcgc tacacacagc agtttgaccg
     1621 ggtgtcaacg agtagcgtag ccgagcttga aatcccccgt cgtgcctggc aagctgcgct
     1681 tgacgagttg cctgcggcgc aacgtcgcgc gcttgaagag gctgccgagc gcatccgcag
     1741 ttatcacgaa cgccaaaagc aagacagttg gacatttacc gaagccaatg gcacggtgtt
     1801 aggtcaaaag atcacgccat tggatcgagg gggtttgtat gtgccgggcg gcaaagccgc
     1861 ttacccatcg tcggtgttga tgaacgtgat tccagccaaa gtggcgggtg tcactgaagt
     1921 catcatggtg accccaacgc ctgatgggc
//
LOCUS       DATBNL010000072         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70626, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000072 DATBNL010000000
VERSION     DATBNL010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70626"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="VIC30_01220"
     CDS             complement(<1..536)
                     /locus_tag="VIC30_01220"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEY7803050.1"
                     /translation="MAANNIEEESFSEINQGLIRLLLVAAVAGIAVGLVGGSFHWLLV
                     HGGAGFLETLAHWKDAGIWGLPGWLAAMVVVGVSVALARWLVTVAPASAGSGVQHVEA
                     VMREDASPAPFKVLPIKFVGGLLAMVPGLALGREGPTIQMAAVIGTQFGKIFRLDRED
                     RFMLYTAVAGSGLSVAFNA"
     gene            724..2619
                     /locus_tag="VIC30_01225"
     CDS             724..2619
                     /locus_tag="VIC30_01225"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016834881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HEY7803051.1"
                     /translation="MNETTREANLELALAAIAAPEFVKHEGIKRWVAEIAAKTQPKEI
                     VWCDGSQEEYDRLCNEMVEAGTLIRLNQEKRPNSFLARSSPDDVARVEDRTFICTDTP
                     EEAGPTNNWIAPDEMRTTLDGLFEGCMRGRTLYVVPFSMGPLGSPIAQIGIEVSDSPY
                     VVVNMRMMTRMGKAVYDVLGTDGAFVPCVHSVGAPLVDGQADVAWPCNSTKYIVHFPA
                     TREIWSYGSGYGGNALLGKKCFALRIASTMGRAAAKDGPGWLAEHMLILGVKAPWGKK
                     YHVAAAFPSACGKTNFAMLIPPEGLSQQGWEITTIGDDIAWIKPDADGRLRAINPEAG
                     YFGVAPGTNEQSNYNCMASLNKNTIFTNVALTDDGDVWWEGMTKEPPAHCIDWKGNDW
                     TPEQAAAGVKAAHPNARFTVSATQNPVLDQAWDDPAGVQIDAFIFGGRRSSTVPLVTE
                     ARNWAEGVYMAATMGSETTAAAMGQQGVVRRDPFAMLPFCGYNMAEYFEHWLQLGERV
                     SQTGAKLPAIFCVNWFRTDENGKFVWPGFSENARVLKWILSRLEQTADGQAHVLGVTP
                     RFEDMDWSGLAFSEQRFSAITSVDPKAWQEEFKLHDELFDKLAHGLPPHLKQIRAELE
                     SRLAQTD"
BASE COUNT          627 a          801 c          773 g          572 t
ORIGIN      
        1 gcgttaaacg ccaccgacaa gccagaacct gccactgccg tatacagcat gaagcggtct
       61 tctcggtcta accgaaatat cttgccaaac tgcgtgccaa taaccgctgc catctggatg
      121 gtcggacctt cgcgaccgag ggctaagccc ggcaccatgg ccagtagacc accgacgaat
      181 ttgatgggca ggactttgaa cggtgctggg ctcgcgtctt cgcgcatcac cgcttcaacg
      241 tgttgcacgc cactgccagc cgatgccggg gcaaccgtca cgagccaacg agccagtgcc
      301 acagacaccc cgaccaccac catggctgca agccacccgg gcaggcccca gatgccggca
      361 tctttccagt gcgcaagcgt ctctaaaaac ccagcgccgc cgtgcaccaa tagccaatga
      421 aaactgccac cgaccagccc cacggcaatg ccggcgaccg ccgccacgag taatagccgt
      481 atcaagccct gattgatctc gctaaaggat tcttcttcga tgttgttggc agccatactc
      541 agccctatct ttcaatcaga ctcgatcgta ccgcgaaccg cgacgcggtg ggtttcactc
      601 ggtggtttca ctcagtggcg tttggtcggg accatttgtt aggggtgata ctaattcgta
      661 gtggcacatg cggtgctaag atcgtttgat ccctaaacct taatcacacc tgacaaaaaa
      721 accatgaacg agacaacccg tgaagcaaac cttgagctgg ccctggcagc catcgcagca
      781 cctgagttcg tcaaacatga gggcatcaaa cgctgggtag ccgagatcgc cgcaaaaacc
      841 caacccaaag aaattgtgtg gtgtgatggc tcgcaagagg aatacgaccg tctgtgtaat
      901 gaaatggtcg aggccggcac actgattcgt ctgaaccaag aaaaacgtcc caactcgttt
      961 ctggctcgct cgtcgcctga tgatgtggcg cgcgtcgaag accgtacctt catctgtacc
     1021 gatacgcccg aagaagcggg cccgaccaac aactggatcg cacccgatga gatgcgcacc
     1081 acactcgatg gtctgtttga aggttgcatg cgtggacgca ccttgtatgt ggtgccgttt
     1141 tctatggggc cgttgggctc accgatcgct cagattggca ttgaagtctc ggactcaccc
     1201 tacgtggtgg tcaacatgcg catgatgacg cgcatgggca aagccgtcta cgacgtactt
     1261 ggcaccgacg gtgcctttgt gccttgcgtg cattccgtgg gtgcgccgct tgttgatggc
     1321 caggccgatg tggcgtggcc ttgcaacagc accaagtaca tcgtgcattt ccccgccacc
     1381 cgcgagattt ggtcttatgg ttcgggctat ggcggcaacg ccttgcttgg caagaagtgt
     1441 tttgcgctgc gcattgcctc gaccatgggt cgggctgccg ccaaagacgg ccccggctgg
     1501 ttggccgagc acatgctgat cttgggtgtt aaagcacctt ggggtaagaa gtaccatgtt
     1561 gcggctgcct tcccgtcggc ttgcggcaag accaacttcg ccatgctgat tccgcccgag
     1621 gggttgtcac agcagggctg ggaaatcacc accatcggtg acgatatcgc ctggatcaag
     1681 cctgatgccg atggccgctt gcgggccatt aaccctgagg ctgggtattt tggggtggcg
     1741 ccaggtacca atgagcagtc caactacaac tgcatggcaa gccttaacaa aaacaccatc
     1801 ttcaccaacg tggcactgac cgatgacggt gacgtctggt gggaaggcat gaccaaagag
     1861 ccaccagcac attgcatcga ctggaaaggc aacgactgga caccagagca agcggcagcc
     1921 ggtgtgaagg ccgcccaccc gaatgcacgc tttaccgtct cagccaccca gaaccccgtg
     1981 ctcgatcaag cctgggatga tccggccggt gtgcaaattg atgcctttat atttgggggg
     2041 cgcagatcca gtaccgtgcc gttggtaacc gaagcacgca actgggccga aggcgtttac
     2101 atggccgcta ccatgggctc agagaccaca gccgcggcca tgggccaaca aggcgtggtg
     2161 cgtcgcgatc ctttcgcgat gctgcctttc tgtggttaca acatggccga gtacttcgag
     2221 cattggctgc agctcggtga gcgcgtgtcg caaaccggcg ccaagctgcc cgcgattttc
     2281 tgtgtgaact ggttccgcac cgatgagaat ggcaagtttg tttggccagg cttcagtgaa
     2341 aacgcccgtg tgctcaagtg gattctgtcg cgtctggaac aaacggctga cggccaagcc
     2401 catgtgctgg gtgtcacacc acggtttgaa gacatggact ggtcagggct ggcattctcc
     2461 gagcaacgct ttagcgccat tacctcggtt gaccccaagg cctggcaaga agagttcaag
     2521 ttgcacgacg agctatttga caagctcgcc cacgggttgc caccgcattt gaagcaaatt
     2581 cgcgctgagc tcgagagccg gttggcacag acggattaaa taatacagac ggcataaacg
     2641 gtataaacga catagacgac agaaacgcga gtgtagtttt gtttgtggtt ataacttgca
     2701 aataatccct gcccatcgca agatggcagg gatgtttgtt ttaaccaccg cgttttaacc
     2761 accacagcag tca
//
LOCUS       DATBNL010000073         1856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70654, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000073 DATBNL010000000
VERSION     DATBNL010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70654"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="VIC30_01230"
     CDS             complement(<1..535)
                     /locus_tag="VIC30_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803052.1"
                     /translation="MNGFTWAMAALAGLAVGLLVMTMTKAKALIETNDWRARCQRLMR
                     WSVRERYARQLDHAALVTWHMTDLWVLKITTSFFLAVVLFWLIGAWWCLPLGAACGWL
                     LVGLWLRQRIKREQLAVTAQLPAFLDLLSMCLAAGMNLQTGVQLVLGYQGKTALANLW
                     RRWLLQVRSGTSRVDAFK"
     gene            complement(532..1416)
                     /locus_tag="VIC30_01235"
     CDS             complement(532..1416)
                     /locus_tag="VIC30_01235"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY7803053.1"
                     /translation="MMDTLWVWVMLGGVATAWVGWLIQRAIYEALEQHRQLYTSQAEH
                     RLRDLFVFVDLKLLWPAAFVAGILLCAILVLSGIGVIAGVIAMLVCWSAPNLGMSWAR
                     RQRIAAFERQLPEALMSISGSIRAGSSLSNALQGLVMHALPPLSQEMAVVNRQIRLGA
                     SAPDAFQQLSARLGGQALELLSITIRVAIQTGGPLAQMLEQTGVTMQANQQIQARLAA
                     LTAQGWLQAWVMGAMPLALMAALGALDPSFADALLETSEGHAVVLIIGFFEVLGIWWL
                     RRTVALPGSKAGEKAGNG"
     gene            complement(1413..>1856)
                     /locus_tag="VIC30_01240"
     CDS             complement(1413..>1856)
                     /locus_tag="VIC30_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEY7803054.1"
                     /translation="DRIVVGECRGAEAIDMLAAMNTGHDGSLTTLHANSPRDAISRLE
                     TMVLMAGKELPLLAIRDQIARAIQLIVQQTRLTDGRRMVTAVDEITGLESGQIQLQPL
                     VRFSAREQTSVPQGLPPTFMPAWREQGVPDLDVIERWFAQGMVQI"
BASE COUNT          452 a          600 c          450 g          354 t
ORIGIN      
        1 gcttgaacgc atcgactcgc gaggtcccgg agcgaacctg cagcaaccaa cgtcgccaga
       61 ggtttgcaag cgccgttttg ccctggtacc ccaagaccag ttgcacacct gtttgcaaat
      121 tcatcccagc cgccagacac atactgagta aatccaaaaa tgctgggagc tgggccgtca
      181 cagcgagttg ctctcgcttg atgcgctgtc ttagccacag ccccactagc aaccatccgc
      241 aggcagctcc aagcggtaag caccaccaag cgccaatcag ccaaaaaagc accactgcca
      301 agaagaaact tgtcgtgatc tttagcaccc acaaatccgt catgtgccac gtcacgagtg
      361 ctgcatggtc gagctgtcgg gcataacgtt cgcgcaccga ccagcgcatg agtcgctgac
      421 aacgtgcgcg ccagtcattc gtctctatca gggctttggc ttttgtcatt gtcatgacaa
      481 gcaaccccac ggcaagaccg gctaaggcgg ccatcgccca cgtaaagccg ttcatccgtt
      541 acccgccttc tcacctgcct tcgacccagg caacgccacc gtgcgtcgca accaccaaat
      601 acccagcacc tcaaaaaaac caatgatcaa tacgacggcg tggccttctg atgtttctag
      661 caaagcatcc gcaaaactag gatccagagc acctaaagcg gccatcaaag ccagcggcat
      721 ggcgcccatc acccaagctt gcaaccagcc ctgagcagtt aatgccgcca accgggcttg
      781 aatttgctgg tttgcctgca tggtcacacc cgtttgctcg agcatctgtg ccagtggccc
      841 acccgtttga atcgccacgc gtatcgtgat cgagagcaac tcgagcgctt gaccgccaag
      901 tcgggccgac agctgctgaa aagcatctgg ggcgctcgcg cccaaccgga tttgtcggtt
      961 caccacggcc atctcttgtg acaacggcgg caaggcgtgc atcacaagtc cttgcaaggc
     1021 attcgacaga ctagagcctg cacgtatcga cccggagatc gacatcagtg cttctggtaa
     1081 ctgacgctca aatgccgcga tccgttggcg ccgtgcccaa ctcatgccaa ggttaggtgc
     1141 actccagcaa accaacatgg caatcacgcc agcaatgaca ccaatcccgc tcaaaaccaa
     1201 gatcgcacac aacaaaatgc cggcaacaaa ggctgccggc catagcagtt tgagatcaac
     1261 aaacacaaac agatctcgta accgatgctc ggcctgtgat gtataaagct gacgatgctg
     1321 ctcaagcgct tcgtagatgg cacgttgtat caaccaccct acccaggctg tggctacgcc
     1381 gccaagcatc acccataccc ataaggtatc catcatattt gcaccatgcc ctgggcgaac
     1441 cagcgctcaa tgacatctag atcaggcaca ccttgttcgc gccaagccgg cataaaggtc
     1501 ggcggcagac cttgcggcac gctggtttgc tcacgcgcag aaaatcgcac caaaggttgt
     1561 aactgtattt gtcccgattc aagacccgta atctcgtcaa cggcggtcac catccgccgg
     1621 ccatccgtga gccgcgtttg ctgcacaatc agttggatag cacgggcgat ttggtcgcga
     1681 atcgctagca gcggcaactc cttacctgcc attagcacca tggtttccag tcgagaaatc
     1741 gcatcgcgcg ggctgttggc gtgcaacgtg gtgagcgagc catcatgccc tgtgttcatg
     1801 gccgccaaca tatcgatggc ctcagcccct cggcactcac cgaccacgat gcgatc
//
LOCUS       DATBNL010000074         2360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_189934, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000074 DATBNL010000000
VERSION     DATBNL010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189934"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1667)
                     /locus_tag="VIC30_01245"
     CDS             complement(<1..1667)
                     /locus_tag="VIC30_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7803055.1"
                     /translation="MDIDKTNPAMTATTPEAVDRYASLVALLQEAFVTHRERVALVSL
                     GAELTYGELDKQSHAWAAWLQSLHLPAGSRVAIMLPNMLASPVTLIGTLRAGCVAVNV
                     NPLYTARELQAQLRDCRPDVIVLFEAFAATLQQVPATDRPKHVVIATVGDLMSKVKGM
                     LVNAVVRHVQRKVPAWHLSGTQQFTHTLNKGADLPFVAPEIKPSDLAFLQYTGGTTGE
                     PRAAMLSHRNVVANIMQVHEIAQPVLGDLLPKQLTMLTALPLYHVFAMTVCELYALYA
                     GMRVVLVINPRDFKTLTKIWRAERPHIFPAVNTLFAALLRHHPFRQLDFSNLRIALGG
                     GMAIHEPVANQWQELTGRTIVEGYGMSETAPVICANATDAKGFSGTVGWPLPGTDVKI
                     LDDDGQPVADGEPGEIAVSGPQVMLGYWQSPEATAAATTPDGYLLTGDIGIKHADGRV
                     QIIDRKKDMILVSGFNVYPAEIDAVFAGHPDVAECAAVGMPDKEGSEVIKLFVVPSEP
                     DIDIEALQAWARERLTGYKRPRDIVLVDSLPKNTVGKTLRRMLREQYA"
     gene            1746..>2360
                     /locus_tag="VIC30_01250"
     CDS             1746..>2360
                     /locus_tag="VIC30_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY7803056.1"
                     /translation="MQLLEPFLQWQDEIKGIRRDIHAHPELAYQELRTSDLVAKLLTD
                     WGIEVDRGLGGTGVVGIIRGSHPHAKDNAIGLRADMDALPMQELNTFEHASQHAGTMH
                     GCGHDGHTAMLLNAARYLANHHDFAGTVYLIFQPAEEGAAGAKRMIEDGLFKKFPMRA
                     VFGMHNWPGLATGTFGVTPGPIMASSNEFPAHRSGRDRLVAPDAR"
BASE COUNT          527 a          705 c          642 g          486 t
ORIGIN      
        1 gcatactgtt cgcgcaacat ccggcgtaat gtcttgccca ccgtgttctt aggtagcgag
       61 tccaccaaga caatgtcacg cgggcgtttg tagccagtaa ggcgctcgcg cgcccacgcc
      121 tgcaaagcct ctatgtcaat atctggctca ctgggcacca caaacaactt gatgacttca
      181 ctgccctctt tgtcgggcat acccacagca gcacactcgg ccacatccgg gtggccggca
      241 aataccgcgt caatttcagc cggatagaca ttaaaaccag acaccagaat catgtctttt
      301 ttacggtcga tgatttgtac acgcccatcg gcatgtttaa tgccaatatc gccggtcaac
      361 aagtaaccgt ctggtgtggt ggccgcagct gtcgcctctg gtgactgcca ataccccaac
      421 atgacctgtg ggccgctcac cgcaatttca ccgggctcgc cgtcagccac cggttgacca
      481 tcgtcgtcga ggattttgac gtcggtgccg ggcagcggcc agcccaccgt cccagaaaag
      541 cctttggcat cggtggcatt ggcacagatc actggtgccg tctccgacat gccgtaaccc
      601 tccacgatgg tgcgcccggt caactcttgc cattggttgg ccacgggttc gtggatggcc
      661 atgccgccac caagcgcaat gcgcagatta gagaaatcca gttggcgaaa cggatgatgg
      721 cgtaacaggg ctgcaaacaa ggtgttgacc gctggaaata tatgcgggcg ctcggcacgc
      781 cagattttgg tcagcgtttt aaagtcacgc gggttaataa cgagcaccac gcgcatgccg
      841 gcatacaggg catagagctc acacactgtc atggcaaaga cgtggtagag cggcaatgcc
      901 gtgagcatgg tcagctgttt gggcagcagg tcgcctaaga ctggctgcgc gatttcgtgg
      961 acctgcatga tgttggccac cacgttgcga tggctaagca tcgccgcgcg tggctcaccg
     1021 gtagtaccac cggtgtactg caaaaacgcc aagtcacttg gcttgatctc aggcgccaca
     1081 aagggcaaat ccgcgccttt gttaagcgtg tgcgtaaatt gctgcgtgcc agacaggtgc
     1141 caagctggca ctttgcgctg cacatggcgc accacggcat taactagcat gcccttgacc
     1201 ttggacatca aatcacccac cgtggcaatc accacatgct tggggcgatc cgtggcaggc
     1261 acctgctgca aggtggccgc aaaggcctca aacaacacga tgacgtcggg acgacagtca
     1321 cgcaactgtg cctgcagttc gcgcgccgta taaagcggat tgacattgac ggccacgcaa
     1381 cccgcgcgaa gcgtgccaat caatgtcact gggctggcca acatgttcgg taacatgatc
     1441 gcgacgcgag aacccgcagg caggtgaagc gactgcaacc aagccgccca agcgtgtgac
     1501 tgtttatcta gttccccgta agtcaactca gcaccgagcg acaccaacgc aaccctctct
     1561 cggtgggtca caaacgcttc ttgcagcagt gccactaagg aggcgtatcg gtcaacggcc
     1621 tcgggcgttg tcgctgtcat cgcaggattt gttttgtcga tatccataca agaaactatt
     1681 ttgactgttt taagacacgt gtttgccgtc ataataacta gcaacgtgct tagtcggaga
     1741 aattcatgca actgctagaa ccttttttac agtggcaaga cgaaatcaag ggcatacgcc
     1801 gagacattca cgctcatcca gagctggctt accaggagct gcgcacctca gacctggtcg
     1861 ccaaactgtt gaccgattgg ggcatcgagg ttgatcgcgg gcttggtggc accggcgtgg
     1921 tgggcattat tcgcggcagt cacccacacg ccaaagacaa cgccatcggc ctgcgcgccg
     1981 acatggacgc cttacccatg caggaactca atacgtttga gcatgccagc cagcacgcgg
     2041 gcaccatgca cggctgcggc catgacggcc acaccgccat gttgcttaac gcagcccgct
     2101 atctggccaa ccaccatgac tttgctggta cggtctacct gatctttcag cccgctgaag
     2161 aaggtgcagc cggtgccaag cgcatgattg aagatgggtt gttcaaaaaa ttccccatgc
     2221 gcgcggtgtt tggcatgcac aactggccgg gtttggccac cggtaccttt ggtgtcaccc
     2281 caggtcccat catggcctcg agcaacgaat ttcccgctca ccgatcaggc cgtgatcgcc
     2341 tcgtcgctcc ggacgcgcgt
//
LOCUS       DATBNL010000075         6012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_160345, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000075 DATBNL010000000
VERSION     DATBNL010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6012
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160345"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..682
                     /gene="arsC"
                     /locus_tag="VIC30_01255"
     CDS             281..682
                     /gene="arsC"
                     /locus_tag="VIC30_01255"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00014.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEY7803057.1"
                     /translation="MQTVTIYHNPKCSKSRQVLATIRDAGIEPDIIHYLDQPPQESTL
                     RQLMQDIGLPIRDLLRQQEAQSLGVDLNDPALSDDHLIHLIREHPILLNRPIVVTTLG
                     TKLCRPPETVLNILPNRNRDQAPRKGEQSGD"
     gene            675..1394
                     /gene="arsH"
                     /locus_tag="VIC30_01260"
     CDS             675..1394
                     /gene="arsH"
                     /locus_tag="VIC30_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012372644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenical resistance protein ArsH"
                     /protein_id="HEY7803058.1"
                     /translation="MTDNNDIEPLDRAAFQMPDPSQLQSQSASTHLPRILLLYGSLRK
                     RSFSRLATEEAARLLNALGAETRVFNPTGLPLPDEAPDSHPKVTELRELANWCEGMVW
                     CSPERHGAMTGIMKAQIDWIPLTSGAVRPTQGKTLAVMQVCGGSQSFNTVNQLRVLGR
                     WMRMLTIPNQSSVPKAFQEFDENDRMRPSPYFDRIVDVMEELVKFTLLTRDIGPYLTD
                     RYSERKETAEELSARVNQRSI"
     gene            complement(1391..2404)
                     /locus_tag="VIC30_01265"
     CDS             complement(1391..2404)
                     /locus_tag="VIC30_01265"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY7803059.1"
                     /translation="MSASDLNLYPSITPFREGLLELDHGHQMHWQLSGNADGQPVLWI
                     HGGPGSRASPMHRRLFDPNKYLIIQYDQRGCGRSLPKGETRHNTTQDLLADIERLRRF
                     LGISNWHVAAGSWGGSLALLYAQVHPEVIRRMLLRSPFLATEQEINAYLFTPPAGCQA
                     VWEQLSRECNQDGPATILEYSHRVFSQADEGKQISAKQSRLARAWVSYESAMDSYPVT
                     HSAPTTQSTQFDDQALIARYRIHLHYLWHRCFLDQPIVDELDRLKGLDLTLVHGDCDA
                     LCPFDNSLLIQKLVPQQLVPQQLVSPATLVTVSGAGHNAFDERMIRAVMQQIERWGAL
                     DGS"
     gene            complement(2425..3174)
                     /locus_tag="VIC30_01270"
     CDS             complement(2425..3174)
                     /locus_tag="VIC30_01270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEY7803060.1"
                     /translation="MKCVSRLRLRLGLLLFVLMALPLFSPTAVWADTSCHPTVDESRP
                     QFTIGYGSLMQEESRLRTAPNTGEAMPVMVTGFERAFNASGNPVGFSTTYLGVIDKED
                     AKIAAALYQVFRSDDIKATDRRESSYCRFSVSPDQIRVLTGADIPANGQYWIYVNKPD
                     YRALASERLPLVQSYIDIFLTGCQQLSQRATEFDGNFAVACLETTKGWSTHWVNDRLY
                     PRRPFIYQPNAGWIDRLLNEHIPEFQSVRIE"
     gene            complement(3342..3746)
                     /locus_tag="VIC30_01275"
     CDS             complement(3342..3746)
                     /locus_tag="VIC30_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005792959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6088 family protein"
                     /protein_id="HEY7803061.1"
                     /translation="MSLETRVKRFIMQCRDEVFVRSDFSRFGSAAQVSRVLRRLVESG
                     RLVKLGIGIYAKAKRSVLTGQSIPVRPVDVLAPIALEKLGVSVKPSQLSRAYNNRETT
                     QIPAGTVINTGKRRINRRIGFGERIVTYEKTN"
     gene            complement(3848..4642)
                     /locus_tag="VIC30_01280"
     CDS             complement(3848..4642)
                     /locus_tag="VIC30_01280"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY7803062.1"
                     /translation="MTDILYEAHGAVRLITINRPNKMNSLDFEANDEMVRVWREFDAD
                     DGARVAVVTGAGEESFCAGADLKTYTIDFAQSPAPEFRRKYTNGPGFAGITRNLDIDK
                     PIVAAVNGYAISGGFELALACDLRFCSPNAEFALQDAKWGFHACDGGLIRLPQIVGLG
                     HAMEIILSGERVDADHAYRIGLVNRIYPQAELLDKTMDYAQMLATRAPLSHRFAKEVM
                     RRSMGMPMGEALALESRSFRDVAMTADLAEGVQSFKERRPAKFEGS"
     gene            complement(4753..5166)
                     /locus_tag="VIC30_01285"
     CDS             complement(4753..5166)
                     /locus_tag="VIC30_01285"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEY7803063.1"
                     /translation="MTQAALDIHVFRCQGCGALHERRPVICPSCLGEAFDDHSVPGVG
                     TLASWTTIRKPPLAHRGHGPYDVAVIDLSVGLRITGRIVSKTHETGSQAELQAGLQAR
                     RQAELRVGAPVGLTHRIDSGGETINVFEVMETIAK"
     gene            complement(5163..>6012)
                     /locus_tag="VIC30_01290"
     CDS             complement(5163..>6012)
                     /locus_tag="VIC30_01290"
                     /inference="COORDINATES: protein motif:HMM:NF014820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803064.1"
                     /translation="DAALVVGVEKMTHATTAEVTSALNCAMDNELDGPNGLTFPGLFG
                     LVWRAYDQTHGLTRDEVSSVVIKNKRHGLLNPLAQMGGQLSFDEIAASAMIADPLQLF
                     DCCPATDGAAALILCSEAMYRQSPKQPVRVLASVQTSGAPQIAKHLDLCTFEATVSAA
                     RQAYANAKIGADQIDVVELHDCFSMAEIVDSEDLGLVPRGQGAKWAAEGRTDIGGDVA
                     INPSGGLLAKGHPVGATGVAQIYEVVRQLRGEHDNQVAGARTGLTHNLGGTGVACTVN
                     ILQAEQ"
BASE COUNT         1448 a         1728 c         1502 g         1334 t
ORIGIN      
        1 cacgcacgag ttctttgtag atctgcgctt gaatctcttg gggtgtctca aaatggtttt
       61 gcatgagcgg gcggataggt gggtggtcgg gtggttgcat gcccatgtgg gcttaggttt
      121 agtaacaagt aaggttttac ctgaaccgca gggtttaatc gatatagacg tttcacctga
      181 atgaggtacg catgcgcctc gcgtgtgaat tgcaacggca aatcgttttc tgtcagttgt
      241 atgctgtgca tcaggcaacc ccgagcgcac aggagactcg atgcaaactg tcaccatcta
      301 ccacaatccg aaatgcagca agtcgcgcca agtgttggcc accatcagag acgctggcat
      361 cgaacctgac atcattcact acctcgacca accaccgcag gagtcaaccc tgcgacagtt
      421 aatgcaagat atcgggttac ctattcgtga tttgttgcgt caacaagagg cccaatcgct
      481 gggcgtggat ctcaatgatc ccgctttaag tgatgaccac ctgattcatc tgatacgtga
      541 acaccctatt ttgctgaacc ggccaatcgt cgtcacaaca ctgggcacca aactttgtcg
      601 gccacctgag actgttttga acattctacc caatcggaat cgtgatcaag cgccacgcaa
      661 aggggaacaa agcggtgact gacaacaacg acatcgaacc gctggaccgg gctgctttcc
      721 aaatgccgga cccaagccag ttgcaatcgc aatcagcgag cactcattta cctcggattc
      781 tgctcttgta tggatcactg cgtaagcgct catttagcag gctggcaacc gaagaagcgg
      841 caagactgct caatgcactc ggtgccgaaa cccgcgtttt caaccccact ggtctgcctc
      901 tgcccgatga agcacctgac tcacacccca aagtcactga attgcgggag ctcgcgaact
      961 ggtgtgaagg catggtgtgg tgctcacccg aacgacacgg cgccatgacc ggcatcatga
     1021 aagcccagat tgattggata ccactcacct ctggtgcagt gcgccccacc caaggcaaga
     1081 cactggctgt tatgcaggtc tgtggtggtt cgcaatcctt taacaccgtc aatcagctac
     1141 gcgtgcttgg gcgctggatg cggatgttga ccatccccaa ccaatcctcg gtacccaaag
     1201 cgtttcaaga attcgacgag aacgaccgga tgcggccatc accttacttt gaccggatcg
     1261 tcgacgttat ggaggagctg gtgaagttca ctttactgac ccgcgacatt gggccttatc
     1321 tgaccgatcg ttacagtgag cgcaaggaaa ccgctgaaga actgtctgcg cgagtcaacc
     1381 aacggtcaat ctagcttccg tcaagcgccc cccagcgctc gatttgctgc atgacagctc
     1441 gtatcatgcg ctcatcaaac gcgttatgac ccgcgccaga cactgtcacc agcgtggcag
     1501 gtgacactaa ctgctgggga actaactgct ggggcactaa cttctggata agcaggctgt
     1561 tgtcaaacgg gcataacgca tcgcagtcac cgtgcaccag tgtcaaatcc agacctttaa
     1621 gtcggtctaa ctcgtccacg atcggctgat ctaaaaaaca tcggtgccat agataatgca
     1681 agtgaatgcg gtagcgcgcg attaaagctt gatcatcgaa ttgcgtcgac tgtgttgtgg
     1741 gggcactgtg tgtgacaggg tagctgtcca tggctgattc gtaggaaacc caagcgcgcg
     1801 ccaatcgtga ctgcttagcg ctgatctgtt tgccttcatc tgcctgactg aatacccgat
     1861 ggctgtattc caaaatggtt gcagggccgt cctgattgca ttcacgcgag agctgctccc
     1921 acaccgcctg acaaccggca ggcggtgtga aaaggtaagc gttgatttct tgttcagtgg
     1981 ccaagaacgg actgcgcaac aacatgcgcc ttattacctc ggggtgcact tgggcataaa
     2041 gcagtgccag cgagccaccc caagatccgg ccgccacatg ccagttggaa ataccaagga
     2101 aacgtctcaa acgttcaatg tcagccaaaa ggtcctgtgt tgtgttgtgt cgggtttcac
     2161 ccttgggaag gcttcgccca cagccgcgtt gatcgtactg aatgatcaaa tacttgttcg
     2221 ggtcaaacaa acgtcgatgc atggggctag cacgactacc cggcccgcca tgaatccaga
     2281 gcaccggctg accatcggca ttgccactga gttgccaatg catctggtgc ccatgatcga
     2341 gctcgagcaa cccctcgcga aacggcgtaa tggacgggta caagttgaga tcagaagcac
     2401 tcacggacga acaatcatct gaagctactc gatgcgcact gactggaact cagggatatg
     2461 ctcgttgagt aatcgatcaa tccagccagc gttgggctgg taaataaacg ggcgtctggg
     2521 gtacagccga tcattgaccc agtgagtgga ccagcccttg gtggtctcta gacacgccac
     2581 tgcgaagttg ccatcgaact cggtcgcacg ctgactcagt tgctggcacc ccgtgaggaa
     2641 aatatcaatg tatgactgca ccaagggcag ccgctccgat gccagtgctc gataatcggg
     2701 cttgttgaca tagatccagt attggccatt ggccggaata tcggcaccgg taagcacacg
     2761 gatctgatcc ggtgacacac tgaaacggca atagctagac tcacgtctgt ctgtggcctt
     2821 gatatcgtcg cttcgaaaca cctggtacaa ggcagctgcg atcttggcgt cttctttgtc
     2881 aatgacgcca aggtacgtgg tactaaaccc aaccgggttg ccagatgcat taaaggcgcg
     2941 ctcaaatccc gtgaccatca ccggcatcgc ctcccctgta ttgggtgcgg tgcgcagacg
     3001 agactcttct tgcatcaaac tgccgtagcc aatggtgaat tgcggtcgac tttcatcaac
     3061 cgtgggatgg caggacgtat cagcccaaac cgccgtcggg gaaaacaacg gcagagccat
     3121 caaaacgaac agcaacaagc ctagacgcaa acgcaaacgt gaaacgcact tcataagaac
     3181 tccgggaaag cgggtggcaa gtggggactt acgacgacaa gaagatgcta acagctgcgt
     3241 acgagcaacc tgaacgaaac ccgcaaaaaa ttaacccagg tgtccgaatt tcattcgtac
     3301 cactctgggc aagccaggcg tcaatcagct caacttgttg ctcagttagt cttctcatag
     3361 gtcacaatgc gttcgccaaa tccaatacgc cgattgatgc gacgcttacc cgtgttaata
     3421 actgtacctg ccggtatttg agttgtttcc ctgttgttat aagctctact gagttggctt
     3481 ggtttcactg acacgccgag cttctcaagc gctatcggcg ctaaaacgtc aacgggtcga
     3541 acgggaattg attgtcctgt gagcacgctg cgcttggcct tggcataaat gccgataccg
     3601 agcttgacta aacgaccgga ctctaccaag cgacgaagca cccgcgagac ctgagcggca
     3661 ctgccaaatc gagaaaaatc agaacgaaca aacacctcat cacgacactg cataatgaag
     3721 cgcttgactc tagtttctag cgacattcgt ttttctcaca tcacacccta tgctcactgg
     3781 ctgacgctat tcaatagtta taggcaaccg gttaaaacac cacatgtccg ctgttcaacg
     3841 gactatctca gctgccctca aacttggccg gccttctttc cttaaatgac tgcacccctt
     3901 ccgccaaatc ggcggtcatg gccacatcgc gaaatgagcg ggactccagc gctagcgcct
     3961 cgcccatcgg catgcccatt gagcgacgca tcacttcttt ggcaaatcgg tgtgacagtg
     4021 gtgcacgcgt ggcaagcatt tgtgcgtagt ccatggtttt atcaagcagt tcggcttggg
     4081 gatagatacg gttcaccaac ccaatgcgat aggcatgatc ggcatcgacc cgttcaccgg
     4141 acaagataat ctccatggcg tgacccagac ccacgatttg cggtaatcgt atcaagccac
     4201 catcacaggc atgaaacccc cacttcgcat cttgcaaagc gaactcggca ttcggtgaac
     4261 aaaaccgcag atcgcaagcc aacgccaatt caaagccacc cgagatagcg taaccgttga
     4321 ctgcagccac aatcggcttg tcgatgtcta ggttgcgcgt aatgcctgca aaccccggcc
     4381 cattggtgta cttgcgacga aactcgggtg ctggcgactg cgcaaaatcg atcgtgtagg
     4441 ttttaagatc cgcccccgca cagaacgact cctcaccggc accggtgacc acggccacgc
     4501 gtgcaccatc atcagcatca aactctcgcc agacacgaac catctcatcg ttggcctcaa
     4561 aatccagtga gttcattttg ttgggtcggt tgatcgtgat tagccgaacc gcaccgtgcg
     4621 cctcatacag aatgtctgtc atgtcgttgc tacctttgtt tactttttgc tttgtctgct
     4681 ttttgctttg tctgcttgtg gcttcgcatg ctgattgccg tgttgcttgt tgccacgtca
     4741 ctcatttctc tatcactttg caatcgtttc cattacttca aaaacgttga tcgtctcgcc
     4801 cccgctatcg atccgatgcg tcaaaccaac tggggcaccc acccgtagct ctgcctgccg
     4861 ccttgcctgg agccccgcct gaagttccgc ctgtgacccc gtctcgtgag tctttgaaac
     4921 gatacggccg gtgatacgta aacccaccga cagatcaatc actgccacgt cgtagggtcc
     4981 atggccgcga tgcgccaacg gtggtttgcg gatggtggtc caactcgcca aagtgccgac
     5041 accaggcact gaatggtcgt cgaaggcctc gccaaggcag ctcgggcaaa tcactgggcg
     5101 acgctcatgt aaagcaccac agccctggca acgaaacaca tggatatcaa gtgcagcttg
     5161 tgtcattgct ctgcctgcaa aatattgacc gtgcaagcca cgcccgtgcc acctaagttg
     5221 tgcgtcaacc ctgtgcgtgc gccagcaact tggttatcgt gttcaccacg cagttgtcgc
     5281 acaacctcgt agatctgagc cacgccggtg gctcctacag gatgaccctt ggccagcaga
     5341 ccaccacttg ggttgatagc gacatcacca ccgatatcag tcctaccttc agccgcccat
     5401 ttggcacctt ggccgcgagg cactaaaccc agatcttcgc tgtcgacaat ctccgccata
     5461 gaaaaacaat catgcaactc caccacgtca atctggtctg cgccaatttt ggcgttggca
     5521 taagcctgtc gcgctgcact gaccgtcgcc tcaaaggtgc aaagatctag gtgcttggca
     5581 atttgcggcg ccccactggt ttgcaccgaa gccaacaccc tgacaggctg cttaggtgac
     5641 tggcgataca tggcttcgga acacaagatc agcgccgctg cgccgtcagt ggccggacaa
     5701 caatcaaaca gttgcagggg atctgcgatc atcgccgacg ccgcaatctc atcaaacgag
     5761 agctggccac ccatttgagc caatgggttt aataggccat ggcgcttgtt tttaatgacc
     5821 accgatgaaa cctcatcgcg cgtcaaaccg tgagtctgat cgtaagctcg ccacaccaaa
     5881 ccaaacaaac caggaaatgt caacccattc ggtccatcca actcgttgtc catggcacag
     5941 ttcaatgctg aggtcacttc tgcagtagtg gcatgcgtca ttttttctac gccgacgacc
     6001 aaggcggcgt ca
//
LOCUS       DATBNL010000076         2258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_90632, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000076 DATBNL010000000
VERSION     DATBNL010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90632"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VIC30_01295"
     CDS             complement(<1..858)
                     /locus_tag="VIC30_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HEY7803065.1"
                     /translation="MNTTPPEAPAPDENHLIAERRQKLARLREQGPAFPNDFTPTHRA
                     AALHALYDEQSKEQLAEHDHRASIAGRMMLKRVMGKASFATIQDGTGRIQIYLDKGTL
                     GEELYDAFKHWDLGDILAVSGVIFKTNKGELSVHAHSVRMLTKSLRPLPDKFHGMTHT
                     ELRYRQRYVDLLMSEQTRQTFELRSKAIATMRTEMVKHAFLEVETPMLQAIPGGATAK
                     PFETHHNALDMQMFLRIAPELYLKRLVVGGIERVFEINRNFRNEGVSPRHNPEFTMME
                     FYAAYTDYQW"
     gene            complement(855..1616)
                     /locus_tag="VIC30_01300"
     CDS             complement(855..1616)
                     /locus_tag="VIC30_01300"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803066.1"
                     /translation="MTSRALTIITGATRGLGHAMAHELAKQGGHLITLNRHPVPDLAS
                     AAESHGTALTEILVDLVDASALEQAAEQLVNVLQNAEHASCCQLIHNAGIVAPIAPAD
                     QLTDIETIRTAFDVNITAPIYLTAHFLAATTACADRRVLLVSSGAGRHAYGSWGVYCA
                     TKAAMDRYAEVVASENHPNLKICSMAPGVIDTGMQAQIRQTPKDQFPAVDRFEDMHRQ
                     GVLTQATECAQTMLKALASERFGQQLLDDIREYYA"
     gene            complement(1613..>2258)
                     /locus_tag="VIC30_01305"
     CDS             complement(1613..>2258)
                     /locus_tag="VIC30_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HEY7803067.1"
                     /translation="YLRYAENKGFKADVLEESEGEVAGIKSATIKIEGDYAFGHLRTE
                     TGVHRLVRKSPFDSAGGRHTSFASVFVYPQVDESIDIDINPADLRIDTYRASGAGGQH
                     INKTDSAVRITHNPSGIVVQCQNDRSQHRNRAEAMDMLRSKLYELEMRNRMAEQQKLE
                     DAKTDVGWGHQIRSYVLDQSRIKDLRTGVEISNTQRVLDGDLDPFIQASLKEGL"
BASE COUNT          473 a          579 c          655 g          551 t
ORIGIN      
        1 ccactggtag tcggtgtagg ccgcgtagaa ctccatcatg gtgaattcag ggttgtgcct
       61 tggactgacg ccttcattgc ggaagttacg gttgatctca aacacccgtt cgattccacc
      121 gacgactagg cgctttaggt aaagctctgg cgcgatacgc aaaaacatct gcatgtcgag
      181 tgcgttgtga tgggtttcaa acggtttagc ggtggcaccg cccggtatgg cttgcaacat
      241 gggggtctca acttcgagaa acgcatgctt gaccatctca gtgcgcatgg tggcaatggc
      301 tttgctgcgc agttcaaacg tctgacgggt ttgctcagac atcaacaaat caacatagcg
      361 ttggcggtag cgcaactcgg tgtgcgtcat gccatggaac ttgtcaggca agggtctaag
      421 cgacttggtc agcatacgca cgctatgggc atgcaccgac aattcacctt tgttggtttt
      481 aaagatcacg ccgctgacag ccagaatgtc gccgagatcc caatgcttga aagcatcata
      541 gagctcttcg ccaagggttc ccttgtcgag atagatctgg atacggcccg tgccgtcttg
      601 gattgtggcg aaacttgctt tgcccatgac gcgtttgagc atcatgcgcc cggcaattga
      661 tgctcgatgg tcgtgttcgg ccaactgctc cttggactgt tcgtcataca acgcgtgcaa
      721 agcggccgca cggtgtgttg gcgtgaagtc atttggaaat gccggacctt gttcacgcaa
      781 gcgggctagc ttctggcgtc gctcggcgat caggtggttt tcatcgggag caggggcctc
      841 gggcggggtg gtattcatgc gtaatattct cgaatgtcat caagcaattg ttgaccaaaa
      901 cgttcactgg cgagtgcctt taacatcgtc tgggcgcact cggtggcttg tgtcagtacc
      961 ccttggcggt gcatgtcttc aaatcgatcg accgcgggaa actgatcttt gggtgtttgt
     1021 cggatctgtg cttgcatacc cgtgtcaata acaccgggtg ccatggaaca gatctttaaa
     1081 ttgggatggt tctctgaggc aacgacctcg gcgtagcgat ccatcgccgc cttggttgca
     1141 cagtaaacgc cccagctgcc ataggcatgg cgaccagcac cggacgagac cagtaaaacc
     1201 cgacggtcag cgcaagctgt ggtggctgcc agaaagtgtg cggttagata aataggcgcg
     1261 gtgatattga catcaaacgc ggtgcgaatg gtctcaatat cggttaactg atcggcaggc
     1321 gcaatcggtg cgacgatgcc agcgttgtga atcagctggc agcaagaagc atgctcagcg
     1381 ttctgtagca cgttaaccaa ctgttctgcg gcttgctcaa gggctgaagc atcgaccaaa
     1441 tcgaccaaga tttctgtcag tgctgtgcca tgtgactcgg ccgcactggc caagtctggc
     1501 acagggtgac ggtttagcgt tattaagtga ccaccttgtt tggcgagctc atgggccatc
     1561 gcatgaccca gcccacgcgt ggccccggta ataattgtga gcgctctgga tgtcataaac
     1621 cctccttcaa gctggcttgg atgaaggggt cgaggtcacc atcaagcacg cgctgggtgt
     1681 ttgaaatctc caccccagtg cgtaggtctt tgattcggct ttgatccagc acatacgagc
     1741 gaatctgatg accccagccc acatcggtct tagcgtcttc gagtttttgc tgctcggcca
     1801 tgcggttgcg catttctagc tcgtagagct tggagcgcaa catgtccatg gcttcagcgc
     1861 ggttacggtg ttgtgagcgg tcgttttggc attgaacaac aatgccagac gggttgtgcg
     1921 tgatacgaac cgctgagtcg gttttgttga tgtgctgacc gcccgcaccg ctggcacggt
     1981 aggtgtcgat gcgcaagtcg gccggattga tatcaatatc aatggactcg tcaacctggg
     2041 ggtacacgaa cacgctggca aatgacgtgt ggcgaccgcc tgccgaatca aacgggcttt
     2101 tgcgcaccag acggtgaacg ccggtttccg tgcgcaagtg accaaacgcg tagtcgcctt
     2161 cgattttgat ggtggcagat ttaatgccgg cgacttcgcc ctcagactct tcgagaacgt
     2221 cggctttgaa gcctttgttc tctgcatagc gcaggtat
//
LOCUS       DATBNL010000077         1937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_950, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000077 DATBNL010000000
VERSION     DATBNL010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VIC30_01310"
     CDS             complement(<1..399)
                     /locus_tag="VIC30_01310"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019652064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY7803068.1"
                     /translation="MSQDNKGFRKGLTSDGDAGFSLFLRKAFIKGAGYTDSALDRPII
                     GITNTGSGFNPCHGNMPQLIEAVKRGVMLAGGLPMDFPTISVHESFAAPTSMFLRNLM
                     SMDTEEMLKAQPMDAVVLIGGCDKTVPAQLM"
     gene            complement(460..1122)
                     /locus_tag="VIC30_01315"
     CDS             complement(460..1122)
                     /locus_tag="VIC30_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008120099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEY7803069.1"
                     /translation="MSPLTREQLAQVVAADLPSNSYANLGVGMPTGVAKYLKPEQGIT
                     LHSENGILGMTALPEGQTPDVDLINASREAVTLTPGASICDHVVSFSMMRGGHIDVTI
                     LGGFQVSVGGDLANWDTGVEGAVPAVGGAMDLVAGAKRVFVMMQHTDREGGSKLVTQC
                     TYPLTGKSVVSRVYTDLAILDVKDDRFVVCGMIAGMTLEQLQAVTDAPLEMAADCRLL
                     DV"
     gene            complement(1103..1798)
                     /locus_tag="VIC30_01320"
     CDS             complement(1103..1798)
                     /locus_tag="VIC30_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEY7803070.1"
                     /translation="MMNKVVDTLSNAVAGIADGSTVLLGGFGTSGTPVELMQALLQTS
                     ATNLTVVSNSAGGGPTGLSELIEAGKVRKLICSFARSLNAQKPSAAAFEKRFRAGEIE
                     LELVPQGTLAERLRAAGAGIGPFFTPTAYGTRLAQGKETRVINGRGYVLEEPLHADVS
                     FVKAHLADPFGNLTYRYAGRNFAPVMCMAAKLTIAQVDRVVAVGDIVPEQVMTPGIFV
                     QRVIECEHVPVNP"
BASE COUNT          447 a          582 c          479 g          429 t
ORIGIN      
        1 catcaactgc gccggcacgg ttttgtcgca gccaccgatc agcaccacgg catccatggg
       61 ctgggccttt aacatctcct cggtatccat ggacatcagg ttgcgcaaga acatgctggt
      121 gggcgccgca aaactctcat gcacggaaat ggtcgggaaa tccatgggca agccacctgc
      181 caacatgacg ccacgtttaa ccgcttcaat aagctgcggc atgttgccat gacaggggtt
      241 aaatccactg ccagtgttgg taataccaat gatggggcga tctagcgcac tgtctgtgta
      301 accagcgccc ttgataaatg ctttgcgaag gaacagcgag aacccagcat caccgtcgct
      361 cgtgagccct tttctgaatc ccttgttgtc ttgactcatt tggtttcctt gccctgacgg
      421 cgtgttttaa atgtcgatca ggcgtggttc caacaccgat caaacatcca ataagcgaca
      481 gtccgccgcc atctcaagcg gcgcatcagt aacagcttgc aactgctcaa gcgtcatgcc
      541 cgcaatcatg ccacacacca caaaccggtc atccttgaca tctaggatgg ccagatccgt
      601 atagacacga ctgaccacgg acttgccggt cagcggatag gtgcactgag tcaccaattt
      661 cgagccgcct tctcgatcgg tgtgctgcat catgacaaac acccgtttgg caccagccac
      721 caaatccatg gcaccaccga cggcaggcac cgctccttct acaccggtat cccaattggc
      781 cagatcacca ccgactgaca cctgaaaccc gcccagaatc gtgacgtcga tatgcccgcc
      841 acgcatcata gaaaacgaca cgacatggtc gcaaatcgat gcccccgggg ttaaggtcac
      901 agcctcgcga ctggcattga tcagatccac atctggcgtt tgcccctcgg gcaacgcggt
      961 catcccaaga atgccattct cactgtgcag cgtgatgcct tgctcgggct ttaggtattt
     1021 ggccacgccc gtgggcatac ccacacctaa gttggcgtaa ctattagatg gcaagtcagc
     1081 ggcaacgact tgcgcgagtt gttcacgggt taacggggac atgttcacac tcaataacgc
     1141 gttgtacaaa gataccgggg gtcatgactt gctcaggcac aatgtcaccg actgctacca
     1201 cacggtcgac ttgggcaatg gtgagcttag ctgccataca catcaccggt gcgaagttgc
     1261 ggcccgcata acggtaggtc agattgccga atgggtcggc tagatgggct ttaacaaacg
     1321 acacatcggc atgcaagggt tcttcgagca catagcctcg gccattgatg acccgcgttt
     1381 ccttgccttg tgccaagcgt gtgccgtagg ccgtcggcgt aaagaatggc cctatgccag
     1441 caccagcagc acgcagtcgc tcagctaacg tgccttgcgg cactagctca agctcgatct
     1501 caccggcccg aaaccgcttc tcaaatgctg cagccgaagg cttctgtgca ttaagcgatc
     1561 tggcaaacga acaaatcagt ttgcgcactt tgcccgcttc gatcaactcg ctcagaccag
     1621 tcggaccgcc gccagcgcta ttgctaacaa cggtcaagtt ggtggcactg gtttgcaaca
     1681 aggcttgcat taactcgact ggcgtgcccg atgtaccaaa cccaccaagc aggactgtcg
     1741 agccatcagc gatacccgca acggcattag acaaggtgtc tacgacctta ttcatcaaaa
     1801 cacctcagtg atcgaattag gtgtgccttc atggtggcgc tgtctctcac gctgtcccct
     1861 cgcttatgta ttgtttgcgc agcatgcacc ttagcttcac tagcggtgct tatcttgctg
     1921 tcttattgtc ttgttgt
//
LOCUS       DATBNL010000078         1852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_140487, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000078 DATBNL010000000
VERSION     DATBNL010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140487"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1272)
                     /locus_tag="VIC30_01325"
     CDS             complement(<1..1272)
                     /locus_tag="VIC30_01325"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012345660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HEY7803071.1"
                     /translation="MPNHSFVPVVLCGGSGTRLWPLSRNGFPKQFLVLHGNQSLFQMA
                     LTRLAGLAGDGFLGADPLVITNEAHRFLAADQLREVAQYDQARLLLEPEGRNTAPAIT
                     LAALAAMAQGQDPVLVVSPADQVVTDVAAYTTALRRAITCAANGSLTILGVPPTHPET
                     GFGYIDSGSAPEAAHSHAVKAFKEKPDAATAAQYLAAGHYFWNSGMFVVKASVWLAAI
                     EAFNPTVCQTVTSSWTNARVDDHFVRPNPEQFVMAPSISADYAVLENCPGSDFGIEVV
                     PLDAGWSDLGAWDAVWQLADKDEHGNATLGDTITVDTSDTLIHATHRLVGTVGVQDLV
                     VVETADAVLIGKRSESQRVKEIVQTIASREREEHLLHRKVHRPWGWYDSIDEGEHFKV
                     KRIMVKPGASLSLQKHHHRAEHWIVVCGRGEV"
     gene            complement(1409..>1852)
                     /locus_tag="VIC30_01330"
     CDS             complement(1409..>1852)
                     /locus_tag="VIC30_01330"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY7803072.1"
                     /translation="IIVGREGWASLAHDDRRDIPHTVFRLKTHPEKYDRLIWIGNADD
                     RKLEQAYAQADCLIAASYDEGFGLPIIEAAQRGIPVIARDIPVFHEVAPAGTTFFSPN
                     ELANTIIWWRKPDKTTLSPFQHTWHDSAVEVLDWLNSAVALDGKH"
BASE COUNT          445 a          497 c          501 g          409 t
ORIGIN      
        1 cacttcacca cgcccacaca ccacgatcca atgctcggca cggtgatggt gcttttgtag
       61 gctaaggcta gcgcctggtt tgaccatgat gcgcttgacc ttgaagtgct cgccttcgtc
      121 gatgctgtcg taccagcccc aagggcgatg gactttacga tgtagcaagt gttcctcgcg
      181 ttcacgagaa gcaatggtct gcacgatctc tttcacacgc tgcgactcac tgcgcttgcc
      241 gatgagaacc gcgtcggcag tctcgacaac aacgaggtcc tgaacgccca cggtacccac
      301 caaccgatgg gtggcatgaa tcaaggtgtc gctcgtatca acggtgatgg tgtcgcccag
      361 cgtggcgttg ccatgttcgt ctttatcggc aagttgccac acggcgtccc aggcacccag
      421 atcactccac ccggcgtcta atggaacgac ttcaataccg aaatcactgc ccgggcagtt
      481 ttcaagaacg gcgtagtcag cagagataga cggcgccatg acaaactgct ccggattggg
      541 ccgcacgaaa tgatcgtcaa cccgtgcatt ggtccatgaa gacgtaacgg tttgacatac
      601 agttggatta aacgcctcga tggcggcaag ccacacactg gctttgacca caaacatgcc
      661 actgttccag aaataatgac ccgcagccag atattgggct gccgtggcgg cgtcgggttt
      721 ttctttgaac gccttgacgg cgtggctatg cgcggcttca ggggcgctac ccgaatcgat
      781 atagccaaac ccggtttctg gatgcgtagg gggtactccc agaatggtca gtgagccgtt
      841 ggctgcgcat gtaatcgctc ggcgtagtgc cgtcgtgtaa gcagcaacgt ctgttaccac
      901 ttgatcggct ggcgagacca cgagaacagg atcctgcccc tgcgccattg ccgcgagcgc
      961 cgccagcgtg atggcggggg ccgtgttacg gccttccggc tctagcagta aacgagcttg
     1021 atcatattgc gccacttcac gtaactggtc agcagccaga aaacgatggg cttcgttggt
     1081 gatgacaagt gggtcagcac ctaaaaaacc atcgccagcc aagccggcca agcgggtgag
     1141 cgccatttga aacagacttt ggtttccgtg cagcaccaaa aattgcttgg gaaagccatt
     1201 gcgcgacaag ggccacaaac gggttccaga accgccacac agcacaacag ggacaaatga
     1261 atggtttggc attggttata actagatgaa atgtaatcag atcagggagg ttgtttactg
     1321 gcaaacgctc ataagccaga gcgactacaa ggatagtcta atttaacctc gaaagtttct
     1381 tggcatcgaa cgctggtatt gaacagttct aatgtttacc atcgagcgcc acagcgctat
     1441 ttaaccagtc aagcacttcg acagcactgt catgccaagt atgctggaag ggtgaaagcg
     1501 tagttttgtc gggcttgcgc caccaaataa tcgtattggc tagttcgttg ggactgaaaa
     1561 aagtggtacc agctggtgcc acctcatgga aaacgggtat gtctcgtgca atcacgggta
     1621 tccctctttg tgcggcctca ataatgggca acccaaaacc ttcgtcataa gaggccgcaa
     1681 tcaaacaatc tgcttgagcg tatgcttgct cgagtttacg gtcgtcggca tttccaatcc
     1741 agatcagacg atcgtatttt tcagggtggg ttttaaggcg aaaaacggtg tgagggatgt
     1801 cacgccgatc gtcatgtgcc agtgacgccc agccctcgcg accaacaatg at
//
LOCUS       DATBNL010000079         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_10915, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000079 DATBNL010000000
VERSION     DATBNL010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10915"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /gene="icd"
                     /locus_tag="VIC30_01335"
     CDS             complement(<1..873)
                     /gene="icd"
                     /locus_tag="VIC30_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003821191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEY7803073.1"
                     /translation="MTYQHIKVPSAGQKITVNADFSLNVPDEPIIPYIEGDGTGMDIT
                     PVMLKVVDAAVTKAYAGKRKIHWMEVYAGEKSTQVYGPDVWLPEETMEAVKDYVVSIK
                     GPLTTPVGGGIRSLNVALRQQLDLYVCLRPVRYFKGVPSPLREPEKTNMVIFRENSED
                     IYAGIEFAAESEQAKALIEFLQNKLGVNKIRFPNTSGIGVKPVSREGTERLVRKAIQY
                     AIDNDRSSVTLVHKGNIMKFTEGGFRDWGYELAQKEFGAEMIDGGPWCKFKNPKTGRD
                     IVVKDSIADAFLQQI"
     gene            946..1380
                     /locus_tag="VIC30_01340"
     CDS             946..1380
                     /locus_tag="VIC30_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEY7803074.1"
                     /translation="MFNPSREQVRSFFIEAWQKRQKNMVLTPLDTMAADLVEMHPEYL
                     QDLQNPEALTQDYSVEQGRTNPFLHLSMHLAIAEQISIDHPPGIRDAYAKLAARHGEH
                     DAIHEIMECLGQVVWEAQRLGTPLDNDTYLDLLQRRATKTGH"
     gene            complement(1480..1836)
                     /locus_tag="VIC30_01345"
     CDS             complement(1480..1836)
                     /locus_tag="VIC30_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7803075.1"
                     /translation="MIATSVFVLATGVFAAGAQAANLQEGQAVWERLNCASCHGAEAA
                     KAIDQSYPILAGQHADYLEHALISYQRGARGLPPSANVRNNAIMSAFAMQMSKQDIDN
                     VSAWLASLPSPLSVKK"
     gene            complement(1856..2086)
                     /locus_tag="VIC30_01350"
                     /pseudo
     CDS             complement(1856..2086)
                     /locus_tag="VIC30_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930954.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
BASE COUNT          500 a          565 c          536 g          485 t
ORIGIN      
        1 aatttgctgc aagaatgcat cagcgatgct gtccttgaca acgatgtcgc gacccgtttt
       61 ggggttcttg aacttgcacc atgggccacc atcaatcatc tcagcaccga attctttttg
      121 tgcgagttcg tagccccaat cacggaaacc accttcagtg aacttcatga tgttgccctt
      181 gtgtaccaag gtgaccgagc tgcggtcatt gtcgatcgcg tattggatgg ctttgcgcac
      241 caaacgctca gtaccttcgc gtgacacagg cttgacacca ataccagacg tgttggggaa
      301 gcgaatcttg ttcacgccaa gcttgttctg caagaattcg atcaacgcct tggcttgctc
      361 tgactcagca gcaaactcaa taccagcgta gatgtcttct gagttttcac ggaagatgac
      421 catgttggtc ttctcaggct cacgcaacgg tgaaggcacg cccttaaagt agcgcaccgg
      481 acgcagacag acataaaggt caagttgttg acgcagggcc acgtttaacg aacggatacc
      541 accgccaact ggggttgtca gtggaccctt aatcgaaacc acatagtctt tgacggcttc
      601 catggtctct tcgggcagcc aaacgtcagg gccatagacc tgcgttgact tctcacccgc
      661 gtaaacttcc atccagtgaa tcttgcgttt gccagcgtag gctttggtca cagcggcatc
      721 gaccacttta agcatgaccg gcgtaatatc catgcccgtg ccgtcaccct cgatgtaggg
      781 aataatgggt tcgtcaggga catttaatga aaaatccgca ttgacggtga tcttttggcc
      841 ggcgctgggc actttgatat gctggtatgt catggatgga tcgctccgcg aaatcggggt
      901 tagagaattg gttattttaa cgcgcatcac aacttaaggc agactatgtt caaccctagc
      961 cgcgaacagg tccgaagctt cttcattgaa gcttggcaaa aacgtcaaaa aaacatggtg
     1021 ttaacacctc tagacaccat ggctgcagac ctcgtagaaa tgcatccgga gtacctgcag
     1081 gacctacaaa acccggaggc gctaacacaa gactacagcg tcgagcaggg ccgcaccaac
     1141 ccgtttttgc atctatcgat gcacttggcc attgccgaac aaatttccat tgatcacccc
     1201 ccgggcatcc gagacgctta cgccaaacta gccgcacgcc acggtgagca cgacgccatc
     1261 catgaaatca tggaatgcct ggggcaagtt gtttgggagg cgcaacgcct gggcaccccg
     1321 ctagacaacg atacctacct cgatttattg cagcgccggg caacaaaaac cggccactga
     1381 ggccggtttt tgagtgcagc gatagcgctt ttgcgtcaga cacaactcgt tgtgtctgct
     1441 gactgcattg actcagtcag cctcgcggtt atctcgcaac tacttcttga ctgacagcgg
     1501 tgacggcaat gacgctagcc atgccgaaac gttatcaatg tcttgtttgg acatttgcat
     1561 ggcaaacgct gacatgatgg cgttgttacg aacattggcc gatgggggca agccacgtgc
     1621 accgcgctgg taagagatca gggcatgctc gaggtaatcc gcgtgctggc cagccagtat
     1681 gggataactc tggtcaattg ccttggcagc ttctgcgccg tgacaggaag cgcagttcaa
     1741 gcgctcccag acggcttggc cttcttgcag gttagctgcc tgagcacccg ctgcaaatac
     1801 gccggtagct aaaacaaaaa cgctggtcgc aatcattttc atgttgtggt ccgccttact
     1861 tcagattcgc gtaataggct gccaaatcgg ccatgtcttg ctcggacagg ctcgaggaaa
     1921 tggcatccat ggtcgggtgt gtgcgctcgc ctgaagcata ggcacgaagc gcgacaatga
     1981 tgtactgttc attttgccca gcaatcatcg gcacagcgta gacctcaggg aagctcgctt
     2041 tgtaaccggg aatgccgtga caaccgatac acatggagac tttcta
//
LOCUS       DATBNL010000080         2413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_994, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000080 DATBNL010000000
VERSION     DATBNL010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_994"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /gene="ribD"
                     /locus_tag="VIC30_01355"
     CDS             complement(<1..1004)
                     /gene="ribD"
                     /locus_tag="VIC30_01355"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEY7803076.1"
                     /translation="MPQTSSSTDQHFMARALELAASGMYVPAPNPRVGCVIVKDGQIV
                     AEGVTQAAGLAHAEVMALRALTQQGLSAQGATVYVSLEPCSHHGKTPPCTDALINAQP
                     ARVVIAHVDPYPAVSGRGIAALRRAGIEVTVGVLADKALEINPGFVSRMVRGTPYVWA
                     KMAASMDRYTALPDGQSQWITGPEARADGHHWRARSCVVLTGIGTVKADDPLLNVRAV
                     QTSRQPKRAVIDPKLEIPNEAQLLQTEGLILFAANAPQQRCDELQAKGALVVNCPEAD
                     APDRVDLMGVMQWLSENDINEVHVEAGAGINGALWRAGCVDELLLYLAPTFLGHGKPM
                     L"
     gene            complement(1014..1490)
                     /gene="nrdR"
                     /locus_tag="VIC30_01360"
     CDS             complement(1014..1490)
                     /gene="nrdR"
                     /locus_tag="VIC30_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY7803077.1"
                     /translation="MKCPFCGHAETLVVDSRTGEDGNFVRRRRRCEKCDRRFTTYERA
                     ELSMPTVVKRNGSRNEYDPRKLKDSLNLALRKRPVSTDEIDQVVHRIEEGLLTSGDRE
                     VSTEKIGALVMQELNKLDKVAYVRFASVYKSFEDIGEFVQAIKEMQKPLPKRDGQS"
     gene            complement(1499..>2413)
                     /gene="glyA"
                     /locus_tag="VIC30_01365"
     CDS             complement(1499..>2413)
                     /gene="glyA"
                     /locus_tag="VIC30_01365"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEY7803078.1"
                     /translation="KPGDTVLGMSLAEGGHLTHGASVNASGKMYNFLQYGLDANEVLD
                     YDKVEALAREHKPKLIVAGASAYSLKMDFERFAQIAKDNGALLLVDLAHYSGLVAGGA
                     YPNPVPHADFVTSTTHKGLRGPRGGIIMMKAEHEKIINSAIFPGIQGGPLMHVIAAKA
                     VAFKEALDPSFKDYSEQVVKNARVLAETLVKRGLRIVSGRTESHVMLVDLRAKGITGK
                     VAEHALGEAHITVNKNAIPNDPEKPFVTSGIRLGTPAMTTRGFKEAEAELTGNLIADV
                     LENPEDEANLLAVRKRVHELTARLPVYA"
BASE COUNT          500 a          723 c          633 g          557 t
ORIGIN      
        1 agcatgggtt tgccatgccc taagaaagtc ggtgccaaat acaacaacag ctcatcgacg
       61 caaccagcgc gccacaaggc tccgttgatg cctgcgcctg cttcaacgtg cacctcgttg
      121 atatcgttct cagacaacca ctgcatcacc cccatcaggt ctacccggtc gggtgcgtcc
      181 gcttctgggc agttcaccac cagcgccccc tttgcctgaa gttcgtcaca tctttgttgt
      241 ggggcatttg cagcaaacag gatcagtccc tcggtttgca gtagctgtgc ctcgtttggg
      301 atttctagct tggggtcaat cactgcccgt ttgggttgtc gtgatgtttg tacagccctg
      361 acattgagca aaggatcatc ggctttaacc gtaccaatgc cagtaagcac cacgcaactg
      421 cgagctcgcc agtgatgacc atctgcacgt gcctcgggac ctgtgatcca ttgcgactgt
      481 ccatcgggca aggccgtata ccgatccatg gacgccgcca tcttggccca tacatagggc
      541 gtgccacgca ccatgcgcga cacaaaccca ggattgattt ccaaagcttt gtcagcgagc
      601 acacctaccg tgacctcgat gcctgctcgc cgaagcgcag cgataccccg acctgagacc
      661 gctggatagg ggtctacgtg agcgatgacc acacgcgctg gttgcgcatt gatcaaggca
      721 tcggtgcaag gcggtgtttt gccgtggtgg ctgcagggtt caagcgacac ataaacggtc
      781 gcaccttgcg ctgacaaccc ttgctgagtc aatgcccgca gcgccatgac ttctgcatga
      841 gcaaggccgg cagcttgtgt aacaccttca gccacaatct ggccgtcttt gacaatcaca
      901 caacccaccc gcgggttcgg tgctggcacg tacataccgc ttgccgctaa ctcgagggcg
      961 cgtgccatga agtgctgatc agtcgaagag ctggtttgtg gcatgcggtg tgatcagctc
     1021 tggccgtcgc gcttaggcag cggtttttgc atttccttga tcgcttgcac gaactcacca
     1081 atgtcctcaa agcttttgta gaccgaggca aaccgcacgt aagcaacctt gtcgagtttg
     1141 ttgagctctt gcatgaccag cgcaccgatt ttttctgtag agacttcacg atcaccgctg
     1201 gttagcagcc cctcttcgat acgatgcacg acctgatcga tctcgtcggt gctgactggc
     1261 cgtttgcgaa gcgctaggtt caaactgtct tttaactttc ttggatcgta ttcattgcgg
     1321 ctgccattgc gtttaaccac cgtgggcatc gacaactcag cacgctcgta cgtggtgaag
     1381 cgccggtcgc atttctcgca acgacggcgc cggcgcacga agtttccatc ctcgcctgtg
     1441 cgtgaatcaa ccaccaaggt ttcagcgtga ccgcaaaatg gacacttcat gctggcgctt
     1501 aagcgtaaac cggtaggcga gccgtcagct catgcacacg cttgcgcact gctagcagat
     1561 tggcttcatc ttccgggttc tcaagcacgt cggcaatcaa gttaccggtc agctcggctt
     1621 cggcctcttt gaaaccacgc gtggtcatcg ctggcgtgcc caaacggata ccgctggtga
     1681 caaacggctt ttctgggtcg ttggggatgg cgttcttgtt gaccgtaatg tgcgcttcac
     1741 ccaaagcgtg ttcagcgacc ttgcccgtga tccctttagc gcgcagatcc acgagcataa
     1801 cgtgactctc ggtgcgacca gacacgatgc gcaaaccgcg cttgaccaat gtttcggcta
     1861 gcacccgggc gtttttaacc acctgctcgg aatagtcctt aaaactcggg tcgagcgctt
     1921 ctttaaaggc cactgccttg gcggcgatga catgcatcag cggcccaccc tggatgcccg
     1981 ggaaaatcgc tgaattaatg atcttctcgt gctcagcctt catcatgatg atgccaccgc
     2041 gtgggccgcg aagacctttg tgcgtggtcg aggtcacgaa gtcagcgtgt ggtaccggat
     2101 tgggataagc gccgccggcc acgagccctg aatagtgcgc cagatcaacg agcaacaaag
     2161 cgccgttgtc tttggcaatt tgcgcaaacc gctcaaaatc catcttcagc gaataagccg
     2221 acgcaccagc cacgatcaac ttgggcttgt gctcacgtgc caaggcttcg accttgtcgt
     2281 aatcgagcac ttcgttggca tccaatccgt actgcaaaaa gttgtacatc ttgcctgacg
     2341 cattgacgct tgcgccatgg gtcaagtgac cgccctcagc caagctcata cccaataccg
     2401 tgtcaccggg ctt
//
LOCUS       DATBNL010000081         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_120537, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000081 DATBNL010000000
VERSION     DATBNL010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120537"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1474)
                     /locus_tag="VIC30_01370"
     CDS             complement(<1..1474)
                     /locus_tag="VIC30_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEY7803079.1"
                     /translation="MIRSAGLVIRRGTQLLLDEAEFVVHPGERVGLVGRNGCGKSTLF
                     ALMRGEIESDAGDLRIPEGWRMASVAQTIIGGERSATDYVLDGHEELRELQHQRQLAE
                     VEDVSGEHIANLEIALEQAGAWQAQSTAQSLLAGLGFPPQDWDKPVDTFSGGWQMRIA
                     LARALMAPSALLLLDEPTNHLDLDAMIWLERWLTNYDGTAIIISHDSEFLDSVCTAVL
                     HIDQRQVTRYKGNYTSFLSQRAERLRLTQIAAQRQSQETVRLQQFIDRFKAKASKAKQ
                     AQSRVKALARMQTLAPLQAEAGINIRIPDPIDTPERLLTLKEASVGYQDADGQMQPIL
                     SGIEMRLEAGDRIGVLGVNGAGKSTLIKLIAGDLAALNGERLPSKTLKVGYFAQHQMQ
                     MLDNDATALQHMARVAPKANEQAWRGYLAQFGFTGDRVNEVISPFSGGEKARLALALV
                     VWDKPNLLILDEPSNHLDAQTREALTTALAEYEGSLLLVSH"
BASE COUNT          321 a          411 c          433 g          368 t
ORIGIN      
        1 cgtgggaaac caatagcaac gatccctcgt attccgccag tgcggttgtg agggcctcac
       61 gggtctgggc atcaaggtgg ttgctgggtt cgtccaagat cagcaggttt ggcttgtccc
      121 agaccaccag tgctaaggcc aagcgagctt tttctccacc agaaaacggt gaaatcactt
      181 cattgacgcg atcgcctgta aaaccaaact gggccaagta accgcgccat gcctgctcat
      241 tggctttggg tgcgacgcgg gccatgtgct gcaaggcggt ggcgtcgtta tcgagcatct
      301 gcatctggtg ctgtgcgaag taaccaactt ttaatgtttt actgggcaat cgctcgccgt
      361 tcaaagctgc aagatcaccg gcaatgagtt tgataagcgt ggacttacct gcgccgttca
      421 cgcccagcac accgatgcga tcacccgcct ccaaacgcat ttcaatgccg cttaggatgg
      481 gctgcatctg gccgtctgca tcttgatagc cgacgctggc ttctttcaaa gtgagtaaac
      541 gctcgggcgt gtcgatcggg tctggtattc ggatgttgat gccggcctcg gcctgcaaag
      601 gtgccaatgt ttgcatgcgt gctagcgctt tgacacggct ttgtgcttgc ttggctttgg
      661 aggctttggc tttaaaacga tcaatgaact gctgcaggcg cacggtttct tgcgattgcc
      721 gctgagcggc tatctgcgtc agtcgcaagc gttcagcacg ttgcgatagg aacgatgtgt
      781 agttgccctt ataacgggtg acttggcgct gatcgatatg tagaactgcg gtgcatacgc
      841 tatcgagaaa ctcactgtcg tgcgaaatga taatggctgt gccgtcgtag ttggttagcc
      901 agcgctccaa ccaaatcatg gcatctaagt cgaggtggtt cgtgggttcg tcaagcaaca
      961 acaacgctga aggtgccatg agtgcgcgcg ctagtgcgat gcgcatttgc cagccaccgg
     1021 agaacgtatc tacaggctta tcccagtcct gcgggggaaa tcccagccca gctaaaagcg
     1081 attgggccgt tgattgtgcc tgccaggcac cggcttgctc gagtgcaatc tcaaggttgg
     1141 caatgtgttc accgctgaca tcttcgactt cggcgagttg acgttggtgc tgaagttcac
     1201 gcaactcttc atggccatct aggacgtagt cggtggcgct acgctcacca ccgatgatgg
     1261 tctgtgccac gctggccatg cgccaacctt ccggaattcg tagatcaccg gcatcggatt
     1321 cgatttcacc acgcattaat gcaaagagcg tgcttttgcc gcaaccattg cgtcccacca
     1381 atccgacacg ctcaccggga tgcacgacaa attcggcttc atcgagcagt aattgggtgc
     1441 cacgacggat gacaaggcca gcgcttctaa tcacgatggt aactgtgctg cgcctagcag
     1501 cagaatgttt cgttcggtcg cagcggtatc gag
//
LOCUS       DATBNL010000082         2079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_180262, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000082 DATBNL010000000
VERSION     DATBNL010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180262"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VIC30_01375"
     CDS             <1..721
                     /locus_tag="VIC30_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803080.1"
                     /translation="APKANEQAWRGYLAQFGFTGDRVNEVISPFSGGEKARLALALVV
                     WDKPNLLILDEPSNHLDAQTREALTTALAEYEGSLLLVSHDRHLLRTTVDQFWLVAHG
                     EVKPFEGDLDDYRQQITSFKPNRSSPDGQARAPAASPIDRKQQRREQAAARQQLAQAT
                     KPLQKELEKLERQLKALAVRVDDLAQQLASEQFYQDNDSQTQHTMIQEHGQLSQQKEA
                     LELQCLSVMEQIEALEKERSN"
     gene            complement(735..>2079)
                     /locus_tag="VIC30_01380"
     CDS             complement(735..>2079)
                     /locus_tag="VIC30_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008159455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY7803081.1"
                     /translation="GEPVRLCEQPSDHTEAQWVLEEIRALHDEGIDRGEMAILYRSNA
                     QSRVLEHALFTAGVPYRVYGGLRFFERQEVKHALAYLRLVNRIDEDSAFLRVVNFPAR
                     GIGARSIEAVNDQAQAHQTSLAHAVARVAGKAGSSLAQFVTLIQTTREQALTLPLSEA
                     VDHVIEASGLRTHYRAQRDGAERLENLDELVNAAKVFELEEDLAGVPCGQSRPSNDDA
                     PDETMTGLEAFLSHAALESGDTQAQVGQDAVQLMTIHAAKGLEFNAVFLTGVEDGLFP
                     HENSLYEPGGLEEERRLMYVAMTRAKQRLYISLAQSRMLHGQTRYCLPSRFIDEIPDE
                     HVKRLSAKPAVDDWIGAGAASRMSGGAANGSGFGGGYGASHGASTSRTKTASGIVVGG
                     QTFRVGQGVRHPRFGEGTILALTGMGLDAQAQVHFLEAGTKTLALGVAKLDIVAG"
BASE COUNT          502 a          623 c          517 g          437 t
ORIGIN      
        1 cgcacccaaa gccaatgagc aggcatggcg cgggtacttg gcccagtttg gttttacagg
       61 cgatcgcgtc aatgaggtga tctcaccgtt ttctggtgga gaaaaagctc gcttggcctt
      121 agcactggtg gtctgggaca aaccaaacct gctgattttg gacgaaccta gtaaccacct
      181 tgatgctcag acccgtgaag cactcacaac cgcactggca gaatacgagg gctcgttgct
      241 attggtttct cacgatcgtc acctgctgcg tactaccgtc gatcagttct ggctcgtggc
      301 acacggcgaa gtcaaaccct ttgagggcga cttagacgat taccgccaac agatcacgag
      361 ttttaaacct aaccgttcgt cacctgatgg ccaagcgcgt gcaccagcgg caagcccgat
      421 tgatcgcaaa cagcagcgcc gcgaacaggc tgcggcgcgc caacaactcg cacaggcgac
      481 caagcccctg caaaaggagc ttgagaagtt ggagcggcag ttaaaagcat tggccgttcg
      541 tgtggatgat ctggcacaac aactcgcaag cgagcagttc tatcaagaca acgatagtca
      601 gacacaacac accatgattc aagaacatgg tcagttgtca caacaaaaag aggcgctcga
      661 acttcaatgc ctatcggtca tggagcaaat cgaggcacta gaaaaagaac gctcaaacta
      721 aaaccgcggc gcaactagcc tgccacgata tctagtttgg cgacgccaag cgccaaggtt
      781 ttagtgcccg cttccaggaa gtggacttgt gcttgcgcgt ctaaacccat gccggttaac
      841 gccagaatgg tgccctcacc aaacctgggg tgacgaaccc cctgccccac acgaaacgtt
      901 tgtccgccca caacgatgcc actggccgtt ttagtgcggc tggtgcttgc gccatgactc
      961 gcaccataac ccccaccaaa acccgaacca ttggctgcac caccgctcat gcgtgatgcc
     1021 gccccagcgc ctatccagtc atcaacagcg ggcttggcgc tcaaacgctt gacatgctca
     1081 tcgggaatct catcgataaa ccgtgatggc aaacaataac gggtttgtcc gtgcaacatc
     1141 cgactctgcg ccaaactgat ataaagacgt tgcttggcac gcgtcatcgc cacgtacatc
     1201 aaccgccgct cttcttccaa gccgcccggc tcgtacagac tgttctcgtg cggaaacaaa
     1261 ccgtcttcaa caccagttaa gaacaccgcg ttgaattcca gtcccttggc cgcatggatt
     1321 gtcatcaatt gcaccgcatc ctgtcccacc tgagcttggg tgtcgcctga ttcaagcgcg
     1381 gcatgcgata aaaacgcttc gagccctgtc atcgtttcat caggggcatc gtcattgctt
     1441 ggcctagact gtccacaagg cacaccagcc aggtcttctt ctagttcaaa caccttggct
     1501 gcgttgacca gttcatcgag gttttctagt cgttcggcgc catcgcgttg tgcgcggtaa
     1561 tgggtgcgta aaccactggc ttcaatcacg tgatcgaccg cctcagacaa gggcaacgtg
     1621 agcgcttgct cgcgggtggt ttggatcagt gtgacaaatt gcgccaacga actacccgct
     1681 ttaccggcaa cccttgcaac cgcatgtgcc aagctggttt gatgcgcttg ggcttggtcg
     1741 ttgaccgctt caatggatct ggcaccaata ccgcgggccg ggaaattcac gacccgtaaa
     1801 aaagcgctgt cttcatcaat acgattgacc agccttaaat acgccagcgc atgcttgact
     1861 tcctgacgct caaagaatcg caatccgccg tacacccgat atgggacacc cgcggtgaac
     1921 aaagcgtgct caagcacacg ggactgggcg ttactacgat acagaatcgc catctcaccg
     1981 cgatcgatgc cttcatcgtg taaagcacgg atttcttcta gtacccactg cgcttccgtg
     2041 tgatccgagg gttgttcaca caagcgcacg ggctcgcca
//
LOCUS       DATBNL010000083         4125 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_150463, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000083 DATBNL010000000
VERSION     DATBNL010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4125
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150463"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..155
                     /locus_tag="VIC30_01385"
     CDS             <1..155
                     /locus_tag="VIC30_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEY7803082.1"
                     /translation="GDVTRTIQNLDVVRVDVERGLIMVKGAVPGHAGANVVVHPAVKA
                     APNKGA"
     gene            161..781
                     /gene="rplD"
                     /locus_tag="VIC30_01390"
     CDS             161..781
                     /gene="rplD"
                     /locus_tag="VIC30_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEY7803083.1"
                     /translation="MDMKLLNEQGQASSTVNVPDTVFGRDFNEALIHQIVVAYQANAR
                     LGNRAQKDRAQVKHSTKKPFRQKGTGRARAGMTSSPIWRGGGRVFPNSPDENFSHKVN
                     KKMYRAGIRSILSQLAREDRIAIVDTFTVESPKTKLAAQKLREMGMDSVLIITDEVDE
                     NMYLATRNLPKVAVIEPRYADPLSLIHYKQVLITKSAVAQLEEMLG"
     gene            778..1074
                     /gene="rplW"
                     /locus_tag="VIC30_01395"
     CDS             778..1074
                     /gene="rplW"
                     /locus_tag="VIC30_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003803043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEY7803084.1"
                     /translation="MNNDRLMQVILAPVVTEKATEVAERNNQIVFRVAPDATKPEIKA
                     AVELLFKVEVDSVQVLNRKGKEKRFGRFMGRRRNERKAYVVLKQGQELNFAEVN"
     gene            1075..1902
                     /gene="rplB"
                     /locus_tag="VIC30_01400"
     CDS             1075..1902
                     /gene="rplB"
                     /locus_tag="VIC30_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009770933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY7803085.1"
                     /translation="MALLKVKPTSPGRRGMLKVVTPTLHKGAPEASLVEKQKRGSGRN
                     NNGHITVRHRGGGHKQHYRMIDFRRNKDGIPAKVERLEYDPNRSAHIALLCYADGERR
                     YIIAPRGLQVGATLVSGIEAPIRVGNTLPIRNIPVGTTIHCVEMLPGKGAQMVRAAGA
                     SAVLLAREGTYAQVRLRSGEVRRVHIECRATIGEVGNEEHSLRQIGKAGAMRWRGIRP
                     TVRGVAMNPIDHPHGGGEGRTGEAQEPVSPWGTPSKGYKTRRNKRTNNMIVQRRKRK"
     gene            1914..2189
                     /gene="rpsS"
                     /locus_tag="VIC30_01405"
     CDS             1914..2189
                     /gene="rpsS"
                     /locus_tag="VIC30_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018440478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEY7803086.1"
                     /translation="MSRSIKKGPFVDAHLLKKVEASVAEQGKKPIKTWSRRSTILPEF
                     IGLTIAVHNGRQHVPVYINENMVGHKLGEFALTRTFKGHAADKKAKR"
     gene            2193..2522
                     /gene="rplV"
                     /locus_tag="VIC30_01410"
     CDS             2193..2522
                     /gene="rplV"
                     /locus_tag="VIC30_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEY7803087.1"
                     /translation="METTANIRGVRISAQKTRLVADLIRGKSVAQALNILTFTNKKAA
                     GILKKAVESAIANAEHNDGADIDELKVSTIFVDKAQSMKRFSARAKGRGNRIEKQTCH
                     ITVKVSA"
     gene            2532..3371
                     /gene="rpsC"
                     /locus_tag="VIC30_01415"
     CDS             2532..3371
                     /gene="rpsC"
                     /locus_tag="VIC30_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEY7803088.1"
                     /translation="MGQKINPIGFRLAVTRNWSSRWYASDKDFSGLLVSDIRVREYLK
                     RKLKSASVGRVVIERPAKNARITVYSARPGVVIGKRGEDIEGLKTDLQRLMGVPVHVN
                     IEEIRKPEVDAQLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGI
                     EIARTEWYREGRVPLHTLRANIDYGTAEAQTTYGAIGIKVWVYKGDMLPNGEMPVDTT
                     PPREEERRPRRAPRGDRPDAKSGRPASRTRAPKKTTEAAAAPESVAPEASAPEAAPAP
                     QGE"
     gene            3374..3790
                     /gene="rplP"
                     /locus_tag="VIC30_01420"
     CDS             3374..3790
                     /gene="rplP"
                     /locus_tag="VIC30_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013340739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEY7803089.1"
                     /translation="MLQPSRRKYRKEQKGRNTGLATRGTNVSFGEFGLKATGRGRLTA
                     RQIESARRAINRHIKRGGRIWIRIFPDKPISQKPAEVRMGNGKGNPEYWVAEIQPGKV
                     LYEMEGVSEEMAREAFRLAAAKLPISTTFVSRHLGA"
     gene            3814..4005
                     /gene="rpmC"
                     /locus_tag="VIC30_01425"
     CDS             3814..4005
                     /gene="rpmC"
                     /locus_tag="VIC30_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019451024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEY7803090.1"
                     /translation="MKASELQSKDVAELKQELESLLKAQFGLRMQKATQQLTNNSEIG
                     KVRRDIARVRTVLTQKAGA"
     gene            4009..>4125
                     /gene="rpsQ"
                     /locus_tag="VIC30_01430"
     CDS             4009..>4125
                     /gene="rpsQ"
                     /locus_tag="VIC30_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY7803091.1"
                     /translation="MTEAQTTPVKRQRTLVGKIVSDKMDKTVVVMVERRVKHP"
BASE COUNT         1059 a         1025 c         1134 g          907 t
ORIGIN      
        1 tgggtgatgt gacccgtacg attcaaaatc tagacgtggt ccgcgttgat gttgaacgcg
       61 gtttgatcat ggttaaaggg gctgtccccg gtcacgctgg cgctaatgtc gtcgtgcacc
      121 cggccgtgaa agctgcccct aataaaggag cctgacaatc atggatatga agctcctaaa
      181 cgaacaaggc caagcgtcgt cgacagttaa cgtaccggac acagtgtttg gtcgcgactt
      241 caacgaagcg ctgattcacc agatcgttgt ggcatatcaa gcgaatgccc gtctcggtaa
      301 tcgcgcgcaa aaagaccgtg ctcaggtcaa gcactctact aagaagccgt ttcgccaaaa
      361 aggcactggt cgtgcacgtg ccggtatgac ttcttcacca atttggcgtg ggggtggtcg
      421 agttttccct aactcgcccg atgaaaactt tagccacaag gtcaacaaga agatgtaccg
      481 tgcgggtatc cgctcgatac tttcccagtt ggcccgcgaa gaccgcatcg cgattgttga
      541 tacgtttacc gttgagtcac cgaagaccaa acttgcagct caaaagcttc gtgagatggg
      601 catggactca gtcctaatca tcaccgatga agttgatgag aacatgtact tggcaacgcg
      661 caacctgcca aaggttgcgg taattgagcc ccgctatgct gatcccttgt ctttgattca
      721 ctacaagcaa gtgttgatta caaagtctgc ggttgctcaa ctcgaggaga tgcttggatg
      781 aacaacgatc gattgatgca agtgatcctg gcgcctgtcg tgacagagaa agccaccgaa
      841 gtagccgaac gcaacaacca gattgtgttc cgtgttgctc ctgacgccac caagccagag
      901 attaaggcag cagtggaact tttattcaaa gtcgaagtgg attcggtcca ggttttgaat
      961 cgcaaaggca aagagaagcg ctttggccgt tttatgggtc gtcggcgcaa tgaacgcaag
     1021 gcctatgtgg ttctgaagca aggtcaagaa ttgaacttcg cggaggtaaa ctaaatggcc
     1081 ctcttaaaag ttaagccaac atcaccgggt cgccgcggga tgttgaaggt ggtaacgccc
     1141 acacttcata aaggtgcgcc cgaagcttca ctcgttgaga agcaaaagcg aggctctggc
     1201 cgtaataata atggtcacat cacggttcgc catcgtggtg gtggtcacaa gcaacactat
     1261 cgcatgattg atttccgtcg taacaaagac gggatccctg cgaaagtcga gcgcttggag
     1321 tacgatccca accgatccgc tcacattgca ttgctttgct atgcggacgg cgagcgtcgt
     1381 tacatcattg cccctcgcgg tttgcaggtt ggtgcaacgc ttgtttcagg tattgaagca
     1441 cccatccgcg tcggcaacac gttgcccatt cgtaatatcc cggtcggtac gacgattcac
     1501 tgcgttgaaa tgttgcctgg caaaggtgca caaatggttc gtgcagccgg cgcatcagca
     1561 gtcttgctgg cacgtgaagg cacatatgct caggtgcgct tgcgctcagg cgaagtgcgc
     1621 cgtgttcaca ttgagtgtcg tgccacgatt ggtgaagtag gtaacgaaga gcacagcttg
     1681 cgccagatcg gtaaagccgg tgccatgcgc tggagaggca ttcgcccaac ggtacgtggt
     1741 gttgccatga acccgatcga tcacccacac ggtggtggtg agggtcgcac aggtgaggca
     1801 caagagccgg tgagcccatg gggcacacca tcgaagggtt ataagacccg tcgcaacaag
     1861 cggacgaaca atatgatcgt ccagcgtcgc aagcgtaagt aagaggccga atcatgtcac
     1921 gttcgattaa aaaaggccca ttcgttgacg cgcatctgct caagaaagtg gaagcgtcgg
     1981 tcgccgaaca gggtaagaag ccgatcaaga cctggtcgcg ccgttccacc atcctgcccg
     2041 agttcattgg gcttaccatt gccgtccaca acggtcgtca acatgtaccc gtttatatta
     2101 acgagaacat ggtcggccac aagctcggcg aatttgcatt gactcgtacg tttaagggtc
     2161 atgcagccga caaaaaggcg aagaggtaaa tcatggaaac gacagcaaat attcgcggcg
     2221 ttcggatttc cgctcagaag accagacttg ttgctgactt gatccgaggt aagtcagttg
     2281 ctcaagcttt gaacatcctg acgttcacga acaagaaagc cgctggcatt cttaaaaagg
     2341 cggtggaatc cgcaatcgct aatgcagagc acaatgatgg tgccgacatt gacgaactca
     2401 aggtttccac tatttttgtt gacaaggcgc agtcgatgaa acggttttcc gctcgtgcaa
     2461 aagggcgtgg taaccgcatt gaaaagcaga cttgccacat cactgtcaaa gtcagcgctt
     2521 aaggagtcac catgggtcag aaaattaacc cgattgggtt tcgtttagca gtaacccgta
     2581 actggtcctc gcgctggtat gcatcagaca aggatttcag cggattactg gtatcagata
     2641 ttcgtgttcg tgaatacctc aagcgtaaat tgaaaagcgc ttcggttggt cgcgttgtga
     2701 tcgagcgtcc cgctaaaaat gcccgaatta ccgtgtactc ggctcgtccg ggtgtggtga
     2761 ttggtaagcg tggcgaggat atcgaaggct tgaagacaga tcttcagcgt ttgatgggcg
     2821 tgcctgtgca tgtcaacatc gaagaaatcc gcaaaccaga agtggatgct cagttgatcg
     2881 ccgattcaat cgcacaacag ctcgagaagc gtattatgtt tcgacgtgct atgaagcgcg
     2941 ccatgcaaaa cgccatgagg cttggtgctc aaggtatcaa gatcatgagc gctggccgtt
     3001 tgaatggtat tgagattgcc cgtactgaat ggtaccgcga aggtcgtgtt ccacttcaca
     3061 ccttacgcgc gaatattgac tacggcacag ccgaggccca aacgacttac ggtgccatcg
     3121 gcattaaggt ttgggtttac aaaggcgaca tgttgcccaa cggcgaaatg cctgttgata
     3181 caacgcctcc acgtgaggaa gagcgtcgtc cacgtcgtgc gccgcgtggc gatcgtcctg
     3241 atgccaagtc gggtcgccca gcgagtcgta cacgtgcccc aaagaaaacg actgaggccg
     3301 ccgccgcacc ggaatctgta gcacctgagg cttcagcacc cgaggctgca ccggcgcccc
     3361 agggagaata atcatgttgc aaccatcacg tagaaaatac cgaaaagagc agaaaggtcg
     3421 taacacaggc cttgcgacgc gtggcaccaa cgtgtcattt ggtgagtttg gtctcaaggc
     3481 cactggccgc ggtcgtttaa ccgcacgtca aattgagtca gcccgtcgcg caatcaaccg
     3541 tcacatcaag cgtggcggtc gtatctggat ccgtatcttc ccagacaaac caatctcgca
     3601 aaagcccgct gaggttcgta tgggtaacgg taaaggtaac cctgagtact gggtcgctga
     3661 aatccagcct ggcaaagtgc tgtatgagat ggaaggtgtg agcgaagaaa tggcaagaga
     3721 ggcatttcgt cttgctgcag ctaagctccc gatttccacg acgtttgtct cgcgccatct
     3781 aggcgcttga ggcgagtgac ataaggaact caaatgaaag ctagtgaatt gcaaagcaaa
     3841 gatgtggcgg aactcaagca ggaacttgaa agtctgctta aagcgcagtt tggtctgcgt
     3901 atgcaaaaag ccacacaaca gctaactaat aacagcgaga ttggtaaggt gcgtcgtgat
     3961 attgctcgcg ttcgtactgt actaactcag aaagctggag cctgataaat gactgaagct
     4021 caaactaccc cggtaaagcg ccagcgtacg ctggtcggga aaatcgttag cgacaagatg
     4081 gacaagaccg ttgttgtgat ggtcgagcgt cgcgtgaagc accca
//
LOCUS       DATBNL010000084         1761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_140600, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000084 DATBNL010000000
VERSION     DATBNL010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140600"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1761
                     /locus_tag="VIC30_01435"
     CDS             <1..>1761
                     /locus_tag="VIC30_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEY7803092.1"
                     /translation="WKGGRSAWQTQWYGINRFFEWLETKAYKMHVRVLLSKYRSYTPC
                     PACHGTRLKPDALLWKAGGHNIHELMCWPISKLQTWFQTLTFDDAVMDTAMELVLQEL
                     NARLKFVCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHP
                     RDMHRVVEVMHRLRSAGNTLVVVEHDPQVMIAADRIIDIGPGPGERGGQIVFDGTPDQ
                     LTQAATLTGQYMRGAKHVEAPRAMPVADNTPRLLLEGVTANNLKNVDLSLPLGRLVCL
                     TGVSGSGKSTLVQNVLHPALLKRMGKPTESPGAHQHLLGYEQIADVVMVDQSQIGKTA
                     RSNPASYVGAFDAIRKLFAQAPLARERSYTAGTFSFNSGDGRCPTCGGTGFEHVEMQF
                     LSDVYLRCPDCDGKRFRPEIREVRVEHLGNSASIDEVLDMTVSEAIQFFQGLRDVQVA
                     LAPLADVGLEYVKLGQPVPTLSGGEAQRLKLAGHLAEAARSGISGKLARKGSLFLFDE
                     PTTGLHFDDVARLMRAFRKLLAAGHSLLIIEHNLDVIRAADWVIDLGPEAGEHGGEIV
                     AAGTPAAVMAVDGSFTGHAL"
BASE COUNT          391 a          510 c          480 g          380 t
ORIGIN      
        1 tatggaaagg cgggcgtagc gcctggcaaa ctcagtggta tggcatcaat cggttttttg
       61 agtggctaga gaccaaggcc tacaaaatgc atgtgcgcgt gctgttgtcc aagtaccgca
      121 gttacacgcc ttgcccagcc tgccacggca cgcgtttaaa gcccgacgcc ttactctgga
      181 aagccggtgg gcacaacatc catgaactca tgtgctggcc catcagcaag ctgcagacct
      241 ggtttcagac gctgacgttt gacgatgcgg tcatggacac cgccatggaa ttggtgctgc
      301 aagaactcaa tgcgcgcctg aaatttgtgt gtgacgtggg ccttggctat ctcacactag
      361 acagacaaag ccggacacta tctggcggcg aagtgcaacg catcaatcta accaccgcac
      421 ttggcacgtc actggtcaat acgctgtttg tcctggacga accttcgatc ggcttgcatc
      481 cacgcgacat gcaccgtgtg gtcgaagtta tgcaccgctt acgatcggct ggcaacacgc
      541 tggtcgtggt tgaacatgac ccgcaagtga tgatcgcagc cgatcgcatc atcgatatcg
      601 gccctggccc aggcgaaagg ggcggacaaa tcgtctttga tggcacaccc gatcaactca
      661 cccaagctgc caccctgaca ggtcaataca tgcgtggtgc caagcacgtc gaggcaccac
      721 gtgccatgcc agtggcagac aacacccctc gcctgctgct tgaaggcgtc acggccaaca
      781 acctgaaaaa cgttgatcta tcactaccac tcggtcgctt ggtgtgttta accggtgtct
      841 ctgggtctgg taaatccacc ctcgtacaaa acgtcctcca ccccgccttg ctcaaacgca
      901 tgggcaaacc caccgagtca ccgggtgcac accagcattt gttgggttat gagcaaatcg
      961 ctgatgtggt gatggtcgat cagtctcaga ttggtaaaac tgcccgatca aacccagcaa
     1021 gttatgtcgg cgcatttgat gcgatccgca aactgtttgc gcaagcccct ctggcacgcg
     1081 aacgcagtta caccgcaggg acctttagct ttaacagcgg cgatggccgc tgccccacct
     1141 gcggtggcac cgggtttgag catgtcgaaa tgcagtttct gtcagacgtt tacttgcgtt
     1201 gcccggattg cgacggcaaa cggtttcgac ctgagatccg cgaagtacgg gttgaacacc
     1261 taggcaatag tgcttcgatc gatgaagtgc tcgacatgac ggtctctgaa gccatacagt
     1321 tcttccaagg attgcgcgat gtacaagtcg cactcgcccc cttggcggat gtcggtctgg
     1381 aatacgtcaa acttgggcag cctgtaccca cactgtccgg cggtgaagcc caacgactca
     1441 aacttgctgg ccatttagcc gaagccgcgc gtagcggcat ttccggcaag cttgcacgca
     1501 aaggcagcct gttcttgttt gatgaaccca ccacgggtct gcatttcgat gatgtggcaa
     1561 gactgatgcg tgcatttcgc aagctgctcg ctgccggaca ctcgctactc atcatcgaac
     1621 acaacctcga tgtcattcga gccgccgact gggtgattga tttagggccc gaggctggtg
     1681 aacatggtgg cgagatcgtg gccgcaggca cgccagctgc cgtgatggcg gtagacggct
     1741 cattcaccgg tcatgcgcta c
//
LOCUS       DATBNL010000085         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_120629, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000085 DATBNL010000000
VERSION     DATBNL010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120629"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VIC30_01440"
     CDS             complement(<1..674)
                     /locus_tag="VIC30_01440"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013393801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7803093.1"
                     /translation="MSKIQASDALKPFRVLDLSRVRAGPNCVRILTDFGADVIRIEPP
                     KGVDPNEAMFAANRSGGDFQNLNRNKRSLTLNLKKPGALDIFMKLVQTADVVVENWRP
                     DVKHKLGLDYESLARVNPRIILASISGYGQTGPYVSRPGFDQIMQGMGGLMSVTGFPD
                     SGPVRAGLAVADMSAGLYAALGILVALIEREQSGKGQWVQASLLHAQIAMMDFQVSRY
                     LNDGDTP"
     gene            complement(681..>1711)
                     /locus_tag="VIC30_01445"
     CDS             complement(681..>1711)
                     /locus_tag="VIC30_01445"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY7803094.1"
                     /translation="PVLDQLAQAGAINLGALAMAEDACSATGQTEHLPTPVNPLGAHL
                     AVGGSSSGSAVAVASGMVYASLGTDTAGSVRIPAMTCGVLGLKTTHGLIDRQAMAPLC
                     PSLDSIGVLARRADDIASVMRVLAVQLDWTPSAPRVAYWLDESVLDPAIASIVAGVMP
                     RYTDQRVDMGSHEANAAVWQEVIMTYEVAQTHRARLASGQACRQVVGLGRTGLAMPEA
                     WWQLALAKRKSSLQAFMGTAFAHADVLLAPLQVDVLPTVDEVYVGHQAFSAAKLLGLH
                     HYCGWVNYLGLPALSVPVGRDDRGLPVSIQLIGKPFGEPQLLALGQKIQTEIYGEQGI
                     MPVLRIPR"
BASE COUNT          419 a          511 c          443 g          338 t
ORIGIN      
        1 ggcgtgtcgc catcgttaag ataacgtgac acttggaaat ccatcatggc aatctgagcg
       61 tgcagcaaag aggcttgcac ccattgaccc ttacccgatt gctcgcgttc aatcagtgcc
      121 accagaatgc ctaacgcggc gtatagcccg gcactcatat cagccaccgc caagccggca
      181 cgaaccggcc ccgagtcagg gaaaccggtt accgacatca aaccgcccat gccttgcatg
      241 atttgatcga accccgggcg tgaaacatat ggcccagtct gcccataacc cgaaatgctg
      301 gcaagaatga tgcgtggatt aacccgagcc aatgactcat agtccaagcc aagcttgtgc
      361 ttgacgtcag gacgccagtt ctcaacaacc acatcagcgg tctggactag cttcataaaa
      421 atatctaaag cgccgggctt tttaaggttc aacgtcaatg accgcttgtt gcgattcaga
      481 ttctggaaat ccccgccgct gcggttggcc gcaaacatgg cttcattggg atcaacgccc
      541 ttgggcggct caatgcgaat gacatcggcc ccaaaatcgg tcaggattcg aacgcaattg
      601 ggaccggcgc gaacgcgcga caagtccagc acacgaaatg gttttaaagc gtctgacgcc
      661 tgaattttgc tcatgatctg ttacctcggt atcctgagca ccggcataat gccctgctcc
      721 ccatatatct ctgtttgtat tttttgacct aacgccaaca actgtggttc gccaaacggc
      781 ttgccaatta actggatgct gaccggcaag cccctgtcgt cgcggccaac aggcaccgac
      841 aaggcaggca aacccaaata atttacccaa ccacagtagt gatgtaagcc taacagcttg
      901 gcggcactaa acgcttgatg tccaacgtag acctcatcaa ccgttggtaa aacatcgacc
      961 tgcagcggtg caagcagcac atcggcgtgc gcgaacgctg tgcccatgaa tgcttgaaga
     1021 ctggatttac gttttgccag tgccaactgc caccatgctt cgggcatggc aaggcctgtg
     1081 cgacccaggc ccacgacttg ccgacaggcc tgaccgcttg cgagcctggc acggtgtgtc
     1141 tgggcaacct cgtaggtcat gatgacttcc tgccagactg ccgcattggc ctcgtgagaa
     1201 cccatatcga cacgctgatc ggtataccta ggcattacac cagcgacgat agaggcaatg
     1261 gctggatcta ggacgctttc atctagccag taagccacgc gtggcgcaga tggtgtccaa
     1321 tccaattgga cagctaaaac ccgcatcacg ctagcgatat catctgcacg gcgagccaaa
     1381 acaccgatgg aatcaagcga cgggcaaagc ggtgccatgg cctgacgatc aatcaagcca
     1441 tgcgtggtct ttagccccag tacgccgcag gtcatggccg gtatacgtac agagccagcc
     1501 gtgtctgtgc caagcgatgc gtaaaccata ccactggcca cagccacagc gctgccgctc
     1561 gaagaaccac cgactgccaa gtgagcgccc aggggattga cgggcgtggg caggtgctcg
     1621 gtttgccccg tggccgaaca agcgtcctcg gccatggcca acgcaccgag attaatagcc
     1681 ccagcttgag cgagttggtc gagcactggc a
//
LOCUS       DATBNL010000086         4961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_31015, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000086 DATBNL010000000
VERSION     DATBNL010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4961
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31015"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..912)
                     /locus_tag="VIC30_01450"
     CDS             complement(<1..912)
                     /locus_tag="VIC30_01450"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY7803095.1"
                     /translation="MLTKPQASHALTPHSEKDQSSWHGLETAAVLTQLSVSDKGLTSE
                     QAKERRAQYGANTHPEHKPPGFLHRLAAQINNLLIYVLLAAVIITWFIDHRLDSIVIL
                     AVVILNISIGLYQEGKAEKSLQAIRQMLAPSAQVLRDGHLQTLPATELVPGDIVSVTS
                     GDNLPADVRWLRSINLRVDESALTGESVAVSKTTEAVVKTAAIGDREGMGFAGTIVAQ
                     GQGRGVVVATGVDTEMGRIGRLLENVQANETPLVRNMAQFSRWLTLTILVFALLLLGY
                     GTWLMDMPMDEAFMAVVGLAVAAIPEGL"
     gene            complement(1032..1838)
                     /locus_tag="VIC30_01455"
     CDS             complement(1032..1838)
                     /locus_tag="VIC30_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803096.1"
                     /translation="MAFRLTTGTLLAVTTLTLSPAAQAFFPFVTDDTGTQGQGGNQVE
                     LNYEWVKAHSDELDLDGRIIGTGTETANSLASGYTYGVTDNIDIFFGVARQTSPVNGW
                     LNTEIGAKWVFAGDQAMGWSAAIKPTLILPVSKNMQDEGLGNAKTNFGLALVSSFMAP
                     THEIHFNLDYTGNQYAQTDEDQDQRKSLFRASAAPVYVINDQWKVGLDVGLQTNPDYS
                     SKYQAFGELGLQYAPAPDLQFGLGLLSSTAVNASSNGWDVAITAGVTYQF"
     gene            complement(2181..2402)
                     /locus_tag="VIC30_01460"
     CDS             complement(2181..2402)
                     /locus_tag="VIC30_01460"
                     /inference="COORDINATES: protein motif:HMM:NF020581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoC-like transcriptional regulator"
                     /protein_id="HEY7803097.1"
                     /translation="MILNRVRSYLQLNRRAALQDMASVLDVSQEALRAMLNTLETRGA
                     VRRLPSGTSCGGSCTKCSPEAVELYEWVR"
     gene            complement(2422..4791)
                     /gene="feoB"
                     /locus_tag="VIC30_01465"
     CDS             complement(2422..4791)
                     /gene="feoB"
                     /locus_tag="VIC30_01465"
                     /inference="COORDINATES: protein motif:HMM:NF007105.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HEY7803098.1"
                     /translation="MQTADKCIVGLIGNPNCGKTTLFNALTGGKQRVGNWPGVTVERK
                     SGEYRFENRSYEVVDLPGTYSLDISDQAISLDELVARQFVEQDGADLIVNIVDASNLE
                     RNLYLTTQLADMGAALLVVVNMLDVAQARAMRIDIDKLATQLGCPVLPMVASQSKGLQ
                     ALREAIAQAVVSPQAAKVATTFEPTIEKALAELVSEIEQTPSSPTEANPTVANPTKAR
                     WLATRLLEGDASARERVTPALLIKAQSLTADLGEDLDLMIADARYGLANELTQQAVKI
                     KGKVARDITDRIDQVVLNRVLGIPLFFLMMYVMFMLTMNVGGAFIDFFDLAAAAIFVD
                     GFGALMDQLGSPQWLTVAIANGIGGGIQTVATFIPIIGFLYLFLSVLEDSGYMARAAF
                     VMDRFMRAIGLPGKSFVPLIVGFGCNVPAIMATRTLEHRRDRLLTIAMAPFMSCGARL
                     PVYVLFAAAFFPTHAQNVVFALYIIGIAAAVVTGLILKNSLLKGQAAPFIMELPSYHL
                     PTVKGVLINTWDRLKGFVVRAGRIIVPMVLVLNFFNALGTDGSFGHEDTKSSVLAEIG
                     RTISPAFSPFGLNAENWPAAVGIFTGVLAKEAVVGTLNATYESLAKSDALERGEALEP
                     EEPFSLPAALTEAVQTIPDNLADAMGSWADPLGIQVGDLSDQQAVAEQEEVSVGTFGA
                     MAARFDGTAGAFAYLLFILLYFPCTAATAAVYQESGTRWMLFVVGWTTGLGYGLATLW
                     YQAANWVRDPVTASAWILGVSATFTACILAMRYHGRSLEQPEMTVAPQN"
     gene            complement(4791..>4961)
                     /locus_tag="VIC30_01470"
     CDS             complement(4791..>4961)
                     /locus_tag="VIC30_01470"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA domain-containing protein"
                     /protein_id="HEY7803099.1"
                     /translation="DSGGYRRKLLAMGLTPSTPLAVVRIAPMGDPVEIRARGCHVTLR
                     RDEANLIQVEKL"
BASE COUNT         1121 a         1345 c         1377 g         1118 t
ORIGIN      
        1 taagccctct gggatagccg ccacggccaa tccaaccacg gccatgaatg cttcatccat
       61 gggcatgtcc atgagccacg tgccatagcc tagtagtagc agcgcaaaca ccaggatggt
      121 caacgtcaac cagcgtgaga actgagccat gttgcgtacc aacggtgttt cattggcctg
      181 gacattttct agtaagcgcc caatgcgtcc catctcggtg tctacgccag tggccaccac
      241 cacaccacga ccttggcctt gggccacaat cgtgccggca aatcccatgc cctcgcggtc
      301 accgatggct gctgttttga ccactgcctc agtggtttta gagacggcca ccgattcgcc
      361 ggttagtgct gactcatcga cgcgaagatt aatactacgc aaccaacgga catcagccgg
      421 taggttgtcg ccagaggtga cagaaacaat gtcgccgggc accagttcag tggcaggcag
      481 cgtctgcagg tgaccatcgc gcaagacttg ggcgcttggt gccagcatct ggcgaatggc
      541 ttgtaaggat ttttctgctt tgccctcctg atacagtccg atggagatat tcaggatcac
      601 gactgccaaa ataacaattg aatccagtcg atgatcgata aaccaggtaa tgatgacggc
      661 cgctagcagc acgtaaatca gcaggttatt gatttgtgcg gcgagtcgat gtaagaaccc
      721 gggtggcttg tgctcgggat gcgtgttggc accgtattgg gcgcggcgtt ccttagcttg
      781 ctcgctggtg agacctttgt cgctgacaga cagttgtgta agcacagccg ctgtttctaa
      841 accatgccat gaggattgat ctttttcaga gtgaggcgtt aaagcgtggc tggcttgtgg
      901 cttagtcaac atctcgctcc ctgttctgaa gtggccaggc attgaccgtg tgaagccgcg
      961 ctgtcatcag atccgagcca aggctggcag tctggtgaca gcgcgtgcgt catgccattg
     1021 accacaacat tttagaattg atacgtcaca cctgcagtga tagcgacatc ccaaccgttg
     1081 ctgctggcat tgactgctgt cgagcttaac agaccgagcc cgaactgcag gtccggtgcg
     1141 ggcgcatatt gcaggccgag ctcaccaaat gcctggtatt tgctgctgta gtccgggttg
     1201 gtctgcaatc caacatcaag cccgactttc cactggtcat tgataacgta caccggtgcg
     1261 gctgatgctc tgaacagcga tttgcgctga tcttgatcct cgtcagtctg agcgtattga
     1321 ttgccggtgt aatcgaggtt gaagtgaatt tcgtgcgtgg gggccatgaa cgagctcacg
     1381 agcgccaaac caaaattggt cttggcgtta ccaagacctt cgtcctgcat gtttttgctc
     1441 acaggcaaga tgagagtggg cttgatcgca gcgctccagc ccatcgcctg gtcgccagcg
     1501 aacacccact tggcaccgat ttcggtgttg agccagccat tgaccgggct ggtttgtctg
     1561 gccaccccaa aaaagatgtc aatgttgtcg gttacgccat aggtatagcc actggccaga
     1621 ctgttggccg tttccgtccc ggtgccaatg attcgcccat caagatcaag ttcatcgctg
     1681 tgtgctttga cccattcgta gttcagctca acttggttgc caccttgacc ctgcgtgccg
     1741 gtgtcatctg tgacgaatgg aaagaaggct tgcgcggctg gtgacaaagt caatgtcgtg
     1801 acagccaaaa gcgtgcccgt tgttaggcga aatgccatga agattctccg tatctaaaac
     1861 aacaatcaaa caatgcgtcg cacgccaaat gggttggccg gcgacgcacc tacaggacgg
     1921 caacggtggt tgcggcgccg tgagctgttg cagcggttgg gtctgttgag ttgtttttgc
     1981 aggagagaac atgttgcttg attaaataga gtctgcgatt gtctagcacc gggcaccgtt
     2041 ctccaaccac caagcgactg agcgctcggt gattggttag cggttggcgg gtattggtta
     2101 tcggttagtt agggatggca gggatactta cactagcgtg agagtgcttg catgcgcgtt
     2161 cctacctgcg agtggctggg ctagcgaacc cactcgtaca gttcaaccgc ctcgggtgag
     2221 cacttggtgc aactgccccc gcatgatgta cccgacggca gacgcctgac agcacctcgg
     2281 gtctcaaggg tattgagcat ggcgcgcagc gcttcttggc tgacgtcgag cacactagcc
     2341 atgtcctgca aggctgcgcg ccggttcaat tgaagatagg atctaacgcg attcaaaatc
     2401 atcaggttac ctcgtacgtg tttagttctg gggtgcgact gtcatctcgg gctgttcaag
     2461 tgatcgcccg tgataacgca tggcaagaat gcatgccgtg aatgtggcac ttacccccaa
     2521 gatccatgcg ctcgctgtca cagggtctcg tacccagttg gcggcctgat accagagggt
     2581 ggctaggcca tagcccagtc ccgtggtcca gcccacgaca aacagcatcc agcgcgtacc
     2641 gctttcttgg tagacggcgg ctgtggccgc tgtgcatggg aaatacagca agataaatag
     2701 taggtaagca aaggcacctg cagtaccgtc aaatcgagct gccatggcac caaacgtccc
     2761 cacagacact tcttcttgtt cggccactgc ttgttggtca gacaagtcgc caacctgaat
     2821 gcccagcggg tcagcccagc ttcccatggc atcggccaag ttgtctggaa tggtttgaac
     2881 cgcttcagtc aaagcagctg gcaacgagaa gggttcttct ggttcaagcg cttcgccgcg
     2941 ttctagcgcg tcgcttttag ccaatgactc gtaagtggca ttcaaggtgc cgaccacagc
     3001 ctctttggcc agcacgccgg taaagatgcc aacggcagca ggccagttct cggcattaag
     3061 accaaacggt gaaaaagccg gagaaatggt gcggccgatt tcagctaaga cggagctttt
     3121 ggtgtcttcg tgcccgaaac tgccgtcggt gcccaaggca ttgaaaaagt tcaacaccag
     3181 caccatgggc acgataatgc gtccggcgcg cacgacgaaa ccctttaagc ggtcccatgt
     3241 gttgatcagt acgcccttaa ccgtcggcaa atggtaggac ggcaactcca tgatgaaggg
     3301 cgcagcttgc cccttgagca aggagttttt aagaatcagt cctgtgacca cggctgcggc
     3361 aatgccgatg atgtagagcg caaacaccac attttgtgca tgggtgggga aaaaagccgc
     3421 agcaaacaag acatagaccg gtaagcgagc accgcaagac ataaatggcg ccatggcaat
     3481 cgtgagcaat cggtcgcggc gatgttccaa ggtgcgcgtg gccataatgg caggcacatt
     3541 gcagccgaaa ccaacaatca atggcacaaa cgatttgcca ggcaaaccaa tggcgcgcat
     3601 gaaccgatcc atcacaaaag ccgctctggc catgtagcca gagtcttcaa ggacagataa
     3661 aaacaggtag agaaacccaa taatcgggat gaaggtggcg accgtctgga tgccgccacc
     3721 gatgccgttg gctattgcaa cggtgagcca ctgcggtgag ccgagttgat ccataagtgc
     3781 accgaacccg tcaacgaaga tggccgcagc ggcgagatca aagaagtcaa tgaatgcacc
     3841 gccgacgttc atcgttagca tgaacattac atacatcatc aaaaaaaaca gtggaatacc
     3901 cagcacacgg ttcagaacca cttggtcgat acggtcagtg atgtcgcgag ccaccttgcc
     3961 tttgattttt acggcctgtt gagtcagttc gttggccagg ccatagcgtg catcggcaat
     4021 catgaggtcg aggtcttcgc caagatcggc tgtcaacgat tgcgctttaa ttaagagcgc
     4081 tggtgtaacc ctctcgcgtg ccgatgcgtc gccttcgagc agtcgggtgg caagccagcg
     4141 cgctttggtt gggttcgcca cggttgggtt tgcttctgtt ggactcgatg gggtctgctc
     4201 aatttccgag accagttccg ccagcgcctt ttctatggtt ggctcaaatg tggtcgccac
     4261 tttagcggct tggggagaga ccacagcctg tgcgatcgcc tcgcgcaatg cttgcagacc
     4321 tttactttgt gaggccacca tcggcaaaac cgggcatccc aactgggtcg cgagcttgtc
     4381 aatatcaatt cgcatggcgc gcgcttgcgc cacatcgagc atgttcacaa ccacaagtaa
     4441 ggctgcgccc atgtcagcta actgcgtggt caggtacagg ttgcgctcga ggttcgatgc
     4501 gtccacgatg ttgacaatta aatccgcacc gtcttgctcg acgaattggc gagccaccaa
     4561 ctcgtccagt gaaatcgcct ggtcgctgat atccaaggag taagtgccgg gcaggtcaac
     4621 tacctcatat gagcgattct caaaccggta ttcaccgctt ttgcgctcaa cggtgacgcc
     4681 aggccagttg cccacccgtt gcttgccacc ggtgagcgcg ttaaataacg tggttttgcc
     4741 gcaatttgga ttgccgatta atcccacaat gcatttgtca gctgtttgca tcaaagtttc
     4801 tccacctgaa tcaagttcgc ttcgtcgcgt cgcaacgtca cgtggcaacc acgtgcccgg
     4861 atttcaacgg ggtcacccat gggtgcgata cgaaccactg ctaggggagt tgagggcgtg
     4921 agccccatgg ctagtaattt tctgcggtaa ccgccgctgt c
//
LOCUS       DATBNL010000087         2748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_100711, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000087 DATBNL010000000
VERSION     DATBNL010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100711"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /gene="ispH"
                     /locus_tag="VIC30_01475"
                     /gene_synonym="lytB"
     CDS             complement(<1..817)
                     /gene="ispH"
                     /locus_tag="VIC30_01475"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEY7803100.1"
                     /translation="MSGQQTETAGAPGVEVILAQPRGFCAGVDRAIEIVERALQVHGA
                     PVYVRHEIVHNKFVVQDLRAKGAVFVKELDEIPPDAMVVFSAHGVSRQVQDEAKTRGF
                     RVFDATCPLVTKVHVEVAKMRAAGLEVIMIGHEGHPEVEGTLGQSNEGMHLVETVADV
                     EQLQVLNPEKLAFVTQTTLSVDDAAVVADALRQRFPGIQEPKKSDICYATQNRQDAVK
                     LMSQQCDLVLVVGSANSSNSNRLREVAARLGVDAYLIDGPAAIESQWLSGKQHV"
     gene            complement(817..1278)
                     /locus_tag="VIC30_01480"
     CDS             complement(817..1278)
                     /locus_tag="VIC30_01480"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005019191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEY7803101.1"
                     /translation="MTNLPTVREDSYLTLHYRIVIESGPGAGSVFIDTFDGRPATLQL
                     GVGQWAPGMEQALIGRSEGDCFSLQLEAEQAYGDRNPELVQRVSRQMLNEHAGEDADF
                     EAGDMVSFTAPNGGQYSGVFKEMDDTGAVFDFNHPLAGRQLRVDIDLLGVI"
     gene            1360..2037
                     /gene="radC"
                     /locus_tag="VIC30_01485"
     CDS             1360..2037
                     /gene="radC"
                     /locus_tag="VIC30_01485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEY7803102.1"
                     /translation="MTLRESLTPEERPRERLAKFGAKALTDAELIALMLGSGLRGRTA
                     IGVASDLLNQCGGLRGLQRQSIKTLTQYRGLGPARASVLAACFELAERTSLSELKAKP
                     SIEHPSQIADYCRVLLTNKSVEHCVAVLLDVQNQVIDCKILSCGTLTEAAVYPREVVK
                     LALEYHASSMILAHNHPSGTPEPSPGDITMTQTLAEALALVDVTLLDHIIVAGPHTLS
                     IREMGHM"
     gene            complement(2082..>2748)
                     /locus_tag="VIC30_01490"
     CDS             complement(2082..>2748)
                     /locus_tag="VIC30_01490"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008168302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEY7803103.1"
                     /translation="EDQDALAVESHKRAIRAQDEGRFSDQIVPVVIKTRKGEVTFDTD
                     EHPRRDISMESLAKLRTVFQKENGTVTAGNASGINDGAAAVVLMSGEALKSSGAKPLA
                     RLVAYAHAGVDPDIMGIGPVPASQTVLKRAGLSIEQIDVIEANEAFAAQACAVSKELG
                     LDPEKVNPNGSGISLGHPIGATGAIITVKALHELHRTGGRYALVTMCIGGGQGIAAIF
                     ERA"
BASE COUNT          647 a          835 c          678 g          588 t
ORIGIN      
        1 ccacgtgttg cttgcccgaa agccactgcg actcgatggc agctggccca tcaatgagat
       61 aggcgtcgac accgagcctg gcggccacct cgcgcaagcg attcgagttc gaactgttcg
      121 cactaccgac aaccaacacc agatcacact gctggctcat cagcttgaca gcgtcttggc
      181 ggttttgtgt ggcgtagcaa atgtcactct ttttaggttc ctgtatgcca ggaaagcgtt
      241 gtcttaacgc atctgccacg acagcagcat catcgactga tagcgtggtt tgggtcacaa
      301 acgccagttt ttctgggtta agcacctgca gctgctcaac gtcagccacc gtctccacca
      361 agtgcatgcc ctcattggac tgaccgagcg tgccctcgac ctcagggtgt ccttcatggc
      421 caatcatgat cacctcgagc ccagcagcgc gcattttagc gacctcgacg tgcaccttgg
      481 taaccagtgg acacgtggca tcgaacactc gaaagccccg cgtcttagcc tcgtcctgta
      541 cctgcctaga gacaccatgc gcagaaaaca ccaccattgc gtcaggcggg atttcatcga
      601 gctctttaac aaacaccgcc cccttggcac gcagatcctg gaccacaaac ttgttgtgca
      661 cgatctcatg acgcacataa accggcgcac cgtgaacttg cagcgcacgc tcaacgattt
      721 caatggctcg atcaaccccc gcacaaaacc cacggggctg tgccaatatc acctcaactc
      781 caggcgcacc cgctgtctct gtttgctgac cgctcatcag atcactccca acaaatcaat
      841 gtcgacccgc agttgccggc ccgcaagcgg gtgattgaaa tcaaacaccg cacccgtatc
      901 gtccatttct ttaaaaacac cagagtactg accaccgtta ggtgccgtaa aggaaaccat
      961 gtcgccagct tcaaaatcag catcctcgcc tgcatgttcg ttgagcatct ggcgactgac
     1021 gcgttgtact aattcagggt tacggtcgcc gtaagcttgt tcggcctcta gttgcaagct
     1081 gaaacaatcg ccttcagacc gtccaattaa ggcctgttcc atgcccgggg cccactgacc
     1141 aacaccaagc tgaagggttg ccggtcggcc gtcaaacgta tcaataaata ccgaaccagc
     1201 gcctgggccg ctttcaatca cgatgcgata gtgcaacgtt aagtacgagt cctcacggac
     1261 ggtgggcaaa tttgtcatgg gtgcgttcgc tagctcttaa agttcaatca aaataccacg
     1321 ttgccaatca aagcaactcg tgattttaaa ggttcatcca tgactttgcg tgaaagcctg
     1381 accccagagg aacgcccacg agaacgactc gccaaattcg gggccaaagc attaactgac
     1441 gctgagctca ttgcactcat gctcggcagt ggcctgcgcg gtcgaaccgc catcggcgta
     1501 gcatcagacc tgctgaacca atgcggcggt ttgcgcggct tgcaacggca gtccatcaaa
     1561 acattgacac aatacagagg cttggggcca gcacgcgcca gtgtgttggc agcatgcttt
     1621 gaattggccg aacgcaccag tctgtctgaa cttaaggcca agcctagcat cgagcatccc
     1681 agccaaatag ccgactactg tcgagtgcta ttaaccaaca agtctgttga acattgtgtc
     1741 gccgtattgc ttgatgttca gaatcaggtc atcgactgca agatcctttc ttgcggcacg
     1801 ctaaccgagg ctgccgtcta cccgcgtgaa gtggtcaaac tagcgcttga gtatcacgcc
     1861 agcagcatga tcctggcgca caaccaccca tcgggcaccc ctgaacccag cccaggtgac
     1921 attaccatga cacaaacatt ggccgaggca cttgctttag tcgatgtaac cttgctggat
     1981 cacatcattg tggcgggccc acacacgctg tccattcggg aaatgggtca catgtgaggg
     2041 cctgcgccgt gctcaaggtc aatacaaact agagaaccag attacgcccg ctcaaagatg
     2101 gcagcaatac cttgaccacc accgatacac atcgtcacca aggcataacg accgccagtt
     2161 ctgtgcaact cgtgcaacgc cttgacggtg atgatggcgc cagtggcgcc aatcggatga
     2221 ccaagcgaaa tgccgctacc gttggggttg accttctcgg gatccaaacc cagctctttg
     2281 gaaacggcac aggcttgggc tgcgaaggct tcattggctt caatgacgtc gatctgttca
     2341 atgctcaaac ccgcacgctt gagaaccgtt tgtgaagccg gcacaggacc aatgcccatg
     2401 atgtcaggat ccacgccagc gtgggcgtag gccacaagcc tagccagggg cttagcaccc
     2461 gaagacttca gcgcttcgcc actcattagc accactgccg ccgcgccatc gttgataccc
     2521 gatgcgttgc cagcagtgac tgtaccgttt tctttctgga atacagtgcg cagcttggcc
     2581 aagctctcca tgctgatatc gcgacgtggg tgctcgtcgg tatcaaaggt gacctcacct
     2641 ttgcgggtct taatgaccac aggcacgatc tggtcgctaa agcggccttc gtcttgtgcg
     2701 cgaatggcac gcttgtgtga ctcaacggcc agcgcatctt gatcttcg
//
LOCUS       DATBNL010000088         1959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_120662, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000088 DATBNL010000000
VERSION     DATBNL010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120662"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VIC30_01495"
     CDS             <1..456
                     /locus_tag="VIC30_01495"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY7803104.1"
                     /translation="VRHAKTAPAGPGQSDHARALEDVGVTDAGKLAHYLRKKGLVPDQ
                     MLVSSANRTQTTAHILSTAFEGQSVDVVVSDELYLADVGFLKEVISGANDEINTLMIV
                     GHNPGLSELAHDFDHEVGGMRPAQMLRVAFDTEHWSKADRKRIVKTRLV"
     gene            complement(570..1592)
                     /locus_tag="VIC30_01500"
     CDS             complement(570..1592)
                     /locus_tag="VIC30_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009855635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEY7803105.1"
                     /translation="MKLKTLSAALLATAAVSVSGVSMAYDEIVSVRQEPIQPIQPAKV
                     DDPQLVKLGAMLFFDPRLSKSGFISCNSCHNLSRGGSDNLATSIGDKWQEGPINSPTV
                     LNSSLNMAQFWDGRAADLKEQAGGPIANPGEMAFTHELAVEMLQSVPGYTVEFRKAFG
                     TDKINIDMVTDAIAAFEETLVTPHSDFDKWLAGDDDALTPTELRGYELFKNSGCVACH
                     NGASLGGNSFQKMGLVEPYHTTAEAEGRSAVTGKDADRFNFKVPTLRNVELTYPYFHD
                     GGADTLVEAVDIMGRLQLGKKFTPDENAAIVAFLKTLTGEQPRIVLPLLPPSSDATPR
                     PTPFED"
     gene            complement(1859..1959)
                     /locus_tag="VIC30_01505"
                     /pseudo
     CDS             complement(1859..1959)
                     /locus_tag="VIC30_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018574284.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
BASE COUNT          487 a          499 c          516 g          457 t
ORIGIN      
        1 gtccgccatg ccaagactgc acctgccggc cccggccagt ccgatcatgc gcgtgcgctt
       61 gaagatgttg gggtaacgga tgcaggcaag cttgcgcatt acctgcgtaa aaagggcttg
      121 gtccctgacc aaatgctggt cagttcggct aaccgcaccc aaacaaccgc ccacattcta
      181 tccacggcct tcgaaggtca gtcggttgat gtggtggttt ctgacgagtt gtatctggcc
      241 gacgtgggct tcttaaaaga agtcattagc ggtgcgaacg atgaaatcaa taccttgatg
      301 atcgtgggtc acaaccctgg tttgtctgaa ctagcacatg acttcgatca tgaggttggt
      361 gggatgcgac ccgcgcaaat gctgcgcgtg gctttcgata cggaacactg gtccaaggcc
      421 gatcgtaagc gcatcgttaa aacgcgattg gtttgatacg acaccacaca ttctggcatt
      481 aatggccatc gatggtgcgg gtcggccgcc caacaaaaag gccggcaaca cgttgccggc
      541 cacagggagc cacctaccgt taactgagct tagtcctcaa acggtgtagg acgtggtgtt
      601 gcatctgaag acggtggcag caagggcaac acgatacgtg gttgctcgcc ggttaacgtc
      661 ttcaagaaag ccacgatcgc agcgttttca tctggggtga atttcttgcc taattgcagg
      721 cgacccatga tgtcaacagc ttcaaccagt gtgtcagcac caccatcgtg gaagtacgga
      781 taggtcagtt ccacattgcg cagcgtcggc actttaaagt tgaaacggtc tgcgtcttta
      841 ccagtcacag ccgagcgacc ttctgcttca gccgttgtgt ggtaaggctc aaccaaaccc
      901 atcttctgga aggagttacc acctaaagat gcgccgttgt ggcaggccac gcaaccgcta
      961 tttttaaaga gctcataacc acgcagctca gtgggggtga gtgcgtcatc gtcaccagca
     1021 agccacttgt cgaaatctga atgcggcgtc accaaggttt cttcaaaagc agcaatggca
     1081 tcggtcacca tgtcgatatt gattttgtcg gtgccaaatg ccttgcggaa ttcaacggtg
     1141 taacccggaa ccgattgcag catttcaacc gccaactcgt gcgtaaacgc catttcaccg
     1201 gggttggcaa ttgggccacc ggcttgttct ttcaagtcag cagcgcgacc atcccagaac
     1261 tgagccatgt ttaggctaga gttcagtacg gttggtgagt tgatgggacc ttcttgccat
     1321 ttgtcaccaa tggaagttgc caaattgtcg ctaccgccac gtgacaggtt gtgacaagag
     1381 ttgcaggaaa tgaaaccaga ctttgacaga cgcggatcaa aaaacagcat tgccccaagc
     1441 ttgaccaact gagggtcgtc aactttggcg ggttggatcg gctgaatggg ctcctgacga
     1501 actgaaacga tttcgtcgta tgccatcgaa acgccagata cagaaacagc cgcagtggcc
     1561 aataaagcag cggataaggt ttttaatttc atgactagcc tcacttgata tgccggtctc
     1621 gttccggcaa ttcaaagtta acaaaggcgt cattcgaagg gggataagtc gaagatgact
     1681 tgttgatgtt tatcaaaaaa tggttctaaa cgaatcggct ctgtggtttg gttgccgcat
     1741 cgatcgtccc tgaacatcac catggcgaac gagtatttaa ccaggatatg accaacgcca
     1801 aacgctttgc tcaagcagca ttcacagcgt ttggcgtcaa ccaggcagca tcgctgtgct
     1861 tcggtgggta tgagatgagc aggtgaacat gatcgtcttg accattgaac tcgagcaact
     1921 cggactcaaa gtcatcaagc actttgtcaa acacgtctc
//
LOCUS       DATBNL010000089         3099 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70812, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000089 DATBNL010000000
VERSION     DATBNL010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70812"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..746
                     /locus_tag="VIC30_01510"
     CDS             <1..746
                     /locus_tag="VIC30_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEY7803106.1"
                     /translation="VDVLVVDTAHGHSAGVIERVRWIKERNDRVQVIGGNIATAEAAR
                     ALLDAGADGVKVGIGPGSICTTRIVAGVGMPQITAIAEVAKALEGTGVPLIGDGGVRF
                     SGDIAKAIAAGASSVMMGSMFAGTEESPGEVVLFQGRSYKSYRGMGSLGAMADGSADR
                     YFQDSSSNNDKYVPEGIEGRVPYKGSVLAIIYQLVGGLRASMGYCGCASIEDMRTKAD
                     FVQITAAGIRESHVHDVQITKEAPNYRAD"
     gene            752..2344
                     /gene="guaA"
                     /locus_tag="VIC30_01515"
     CDS             752..2344
                     /gene="guaA"
                     /locus_tag="VIC30_01515"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006402676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEY7803107.1"
                     /translation="MHERILILDYGSQVTQLIARRVRETGVYCELHAGDISEVFLAEQ
                     KSLGLKGIILSGSHLSAYDEDALKVPQAVFEQGVPVLGICYGMQAMAMQFGGEVTHAD
                     HREFGYAEVRARGHTQLFDGIEDFSTPEGHGMLKVWMSHGDQVTRLPDGFKLMASTPS
                     CPIAGMADESRHFYGVQFHPEVTHTVQGQAMLTRFVREICGCHADWNMPDYVDEAVAK
                     IREQVGSDHVILGLSGGVDSSVAAALIHKAIGEQLTCVFVDHGLLRLNEAEQVMSTFA
                     EHMGVNVIHVDATDDFMGKLDGVTDPEAKRKIIGGEFVEVFQREAGKIDNAKWLAQGT
                     IYPDVIESAGAKTGKAVSIKSHHNVGGLPETLNLSLLEPLRELFKDEVRKLGIALGLP
                     PEMVYRHPFPGPGLGVRILGAVNKQFADWLREADAIFIEELRNTIDAESNKSWYDLTS
                     QAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTSDFMTADWAPLPHQLLSKVSSRIINE
                     VKGINRVVYDVSTKPPATIEWE"
     gene            2500..2736
                     /locus_tag="VIC30_01520"
     CDS             2500..2736
                     /locus_tag="VIC30_01520"
                     /inference="COORDINATES: protein motif:HMM:NF020542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1902 domain-containing protein"
                     /protein_id="HEY7803108.1"
                     /translation="MQKIYFVRAEWDDEAQVWVATSDDVPGLVTEADTLESLSVKLEA
                     LIPELLDLNGFLNVEEVPFELLARKFSVTQRNLH"
BASE COUNT          689 a          715 c          919 g          776 t
ORIGIN      
        1 gcgtcgatgt actcgtggtc gataccgccc atggtcactc agccggtgtc attgagcgcg
       61 tgcgctggat taaagagcgt aacgatcgag tgcaagtcat tggtggcaat atcgccacag
      121 ctgaagcggc tcgggcgtta cttgatgccg gtgccgatgg tgtcaaagtc ggtattggtc
      181 ctggatcgat ttgcaccacg cgtattgtgg cgggtgtcgg tatgccacag atcaccgcga
      241 tcgctgaagt cgccaaagca cttgaaggca ccggtgtgcc attgattggt gacggcgggg
      301 tgcgattctc gggcgacatc gccaaggcga ttgccgcggg tgcttcgtcg gtgatgatgg
      361 gtagcatgtt tgccggcacg gaagagtcac ctggcgaagt ggtgctgttt caagggcgtt
      421 cgtacaagtc ctatcgtggc atgggcagct tgggtgccat ggccgatggc tcggctgacc
      481 gctacttcca ggactcgtca agcaacaacg acaagtatgt gcctgaaggc attgagggtc
      541 gggtgcctta caagggcagt gtgcttgcga tcatctatca gctagtgggc ggtctgaggg
      601 catcgatggg ttattgcggt tgtgcctcga ttgaggacat gcgtaccaag gcggactttg
      661 tgcaaatcac tgccgctggt attcgtgagt cacacgtgca cgacgtgcag atcaccaaag
      721 aagcccctaa ctaccgcgcg gactgaccaa catgcatgaa cgaattctga tcctggatta
      781 tggatcccag gtaacccagc tcattgcccg tcgtgtgcgt gagactggtg tgtactgcga
      841 gttgcacgca ggcgatatct cagaggtttt cctggccgaa caaaagtcgt tggggcttaa
      901 gggcattatc ctgtctggca gtcatctatc tgcttatgac gaagatgcgc tcaaagtccc
      961 acaggctgtg tttgagcagg gcgtgccggt gctgggaatt tgttatggca tgcaggccat
     1021 ggccatgcag tttggcggtg aagtcaccca cgctgaccat cgcgagtttg gttacgctga
     1081 agtgcgcgcg cgtggtcaca cccaactctt tgacggcatt gaggatttca gtaccccaga
     1141 gggtcatggc atgctcaagg tctggatgag ccacggtgac caggtcacgc gcttgccaga
     1201 tgggtttaag ttgatggctt ccacaccatc atgtccgatt gccggcatgg ccgatgagag
     1261 ccgacatttt tacggcgtgc agtttcaccc agaggtcaca cacacggtgc aaggtcaagc
     1321 catgctcacg cgttttgtgc gtgagatttg tggctgtcat gcggactgga acatgccgga
     1381 ctatgtcgac gaggcggtgg ccaagattcg tgagcaggtc ggttcagacc atgtgattct
     1441 gggtttgtcc gggggcgtgg attcttcggt ggcagcggct ttgattcaca aagcgattgg
     1501 tgagcagttg acctgcgtgt ttgtcgatca cggcttgttg cgcttaaacg aagccgagca
     1561 ggtgatgtca acgtttgccg agcacatggg cgtcaatgtc attcatgtgg atgccaccga
     1621 tgatttcatg ggcaagctcg atggcgtgac tgatcccgaa gccaagcgca agatcattgg
     1681 cggtgagttt gttgaggtgt ttcagcgtga ggccggcaag atcgataacg ccaagtggtt
     1741 ggcacaaggc acgatttatc ccgatgtgat cgagtcggct ggtgccaaga ctggtaaggc
     1801 ggtctcgatc aagtcgcacc ataacgttgg cggcttgcct gagacgctga atctgagtct
     1861 gctggaacca ctgcgtgaac tattcaaaga cgaagtcaga aaactcggca ttgcccttgg
     1921 cttgccgcca gagatggttt atcgccatcc gtttccagga ccgggccttg gggtgcggat
     1981 cctcggtgcg gtgaataaac aattcgccga ctggctgcgt gaagctgatg cgatctttat
     2041 tgaagagcta cgcaacacca tcgatgctga aagcaataag tcttggtatg acctgacttc
     2101 acaagcgttt gcagtgttct tgccggtgaa atcggtcggc gtcatgggcg atggccgcac
     2161 ctacgaatac gttgtggcac tcagagctgt gcagacgtca gactttatga cggcagactg
     2221 ggcaccactg ccacaccaat tgctctcaaa ggtatcgtcg cgcatcatca atgaagtcaa
     2281 gggtatcaat cgtgtggtgt acgacgtctc gaccaagcca ccggcgacca ttgagtggga
     2341 gtgatggtgt gtcgacgctt ttctaacgac ttttctatgt tgtcatatct agaacaagcg
     2401 taggctaggg aaatttttct aagctctgct cgaggaatac gtaatggttt tagtttgcca
     2461 agcttagggt gcgcatttga acaagtctgg agagatttaa tgcaaaaaat atattttgtt
     2521 cgtgcagaat gggatgatga agcccaggtg tgggtagcaa catcagatga tgtgccagga
     2581 ctggtcacag aagctgatac gttggaatcc ctctcggtca agttagaggc tctgatacct
     2641 gagttgttgg atttaaacgg attcctaaat gttgaagagg tgccattcga acttttagcc
     2701 cgcaagttct ctgtcaccca aagaaacttg cattaaatgg gtagtaactt ttctgttgag
     2761 ctcaagcggc ttctttcaca ggctggctgc tactttgagc gtcctggtaa gggcgatcac
     2821 gacatctggt actctccgat caccaaagtc agatttccag ttgacagcaa aattaaatcg
     2881 cgccacacgg caaacgccgt gttgaaacag gcaggtttgc ccaagcagtt ttgaagagat
     2941 attgttgtta tgtctcgtaa ccattactcg aagacgattt gatgtgggct ggcggaattt
     3001 tgagagtatc tacaaagaca tagccaatgc gtgttgtgtt ttagtcgcaa atgatacaac
     3061 tatggttttg tcatccgggg aacgttcaag cgatggttg
//
LOCUS       DATBNL010000090         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1151, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000090 DATBNL010000000
VERSION     DATBNL010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..984)
                     /locus_tag="VIC30_01525"
     CDS             complement(<1..984)
                     /locus_tag="VIC30_01525"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEY7803109.1"
                     /translation="MTTSSLSNVWRAAQLLHANAQTTQRTIEDTTRLAHAYGFDIEIL
                     PQWDTIVCRTRDRNDPSAAWQTKLLEVRPAGVDMHKVASTNQWIETVCTDPDRADADH
                     IERASLSLADIANYTPSSHLRFTVMAGFGAAALGVIFGVTSPLTLVLIFFAAVFGAVA
                     RRLLSKVSDNLLIQPFVAALIAGLVGGYAQKVFTGEGLQFVEIAPCMILVPGAHILNA
                     ALDLVRGRLGLGIARATYCVLILLSICAGLLLGLSLMDTSLAWGPATSSTPLWLDVLC
                     AGIAVSAFGAFFSLPWHLLAAPVFVGMLCHGSRWVVIEQGAGLATGALIACL"
     gene            complement(971..2554)
                     /locus_tag="VIC30_01530"
     CDS             complement(971..2554)
                     /locus_tag="VIC30_01530"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020065051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEY7803110.1"
                     /translation="MLNRGTAFTVEERQAAGIEGLLPVGVDKLELQMARVHTQLDMLE
                     SDLQCYLYLMDLQSRNQTLFYAVIMSDPARFMPLVYTPTVGEACQKYDHIFRASRGIY
                     LPISAKGRLKELLLNWPIKDIRFIVATDGERILGLGDLGVGGMGIPVGKLALYTAVAG
                     VPPAVTLPITLDVGTNNQDLLNDPLYLGLRQPRVRGEEYDAFIAEFVDAVQSLYPKCC
                     LQWEDFANFNAVPILNTYKDKICTYNDDIQGTAGVALAGIYGALRISGGKLTDQRFLF
                     MGAGSAATGIAELISEAMVMEGLTIEQARARNWLFDINGLVESSRKDLADFQKPFAHK
                     HAPCKSFIDAINDIKPTGIIGVSTVPKLFNQQVIETMSRINARPIIFPYSNPTSRSEC
                     TAQEAYQWSDGNAIFASGSPFDPVKIKDKTFVPGQGNNVYIFPAMGMAVLATEATRVT
                     EQMFIVAAKAVAEQVTQQELDSGLIYPPQSQILTASLHTAARIADYIFEQGLARVKKP
                     KDVEAHIREMAYKPVYDNQ"
     gene            complement(2795..>3253)
                     /locus_tag="VIC30_01535"
     CDS             complement(2795..>3253)
                     /locus_tag="VIC30_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008919996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEY7803111.1"
                     /translation="EPGSSIMPGKVNPTQAEALTMLAAQVMANDVAVGFGGASGYLEM
                     NVYKPLIIYNITHSITLLTDGCTNFRQFLVQGTEPNHKKIAEYVERSLMLVTALAPVI
                     GYDKASKIAHHAMDHDLTLKAAALELGYISEQEFDEIVDPAKMVHPYVAK"
BASE COUNT          763 a          829 c          877 g          784 t
ORIGIN      
        1 tagacacgcg atcagtgctc cagtagcgag acccgccccc tgttcgatga ccacccaccg
       61 actgccatga cacaacatgc ccacgaacac aggtgccgcc agcaagtgcc agggcaggga
      121 gaagaaggca ccaaatgctg acacagcaat gccggcacaa agcacgtcaa gccaaagtgg
      181 tgtgcttgaa gtggctgggc cccaagccaa ggaagtgtcc atgaggctta ggcccaataa
      241 caagccagca caaattgaca gcaaaataag tacgcaatac gtggctctgg caatgcctaa
      301 gcccaagcga cctcgaacga gatcaagcgc tgcatttaga atgtgcgcgc ctggtaccaa
      361 gatcatgcac ggcgctattt ccacaaactg cagaccttca ccagtaaaaa ccttttgtgc
      421 atacccacca actagtccag cgatcagtgc tgccacaaat ggctgaatca gtaggttgtc
      481 agagactttg gaaagcaggc gacgcgccac agcaccgaag acggcagcaa aaaaaatcag
      541 cacaagcgtc aatgggctcg tcaccccaaa aatcacccca agtgccgccg caccaaagcc
      601 agccatcacg gtaaagcgca agtgactgct tggtgtgtaa ttggcaatgt cagccaatga
      661 taggctggcg cgttcaatgt gatcggcgtc agcccgatca ggatcggtgc aaacagtctc
      721 gatccactgg ttggtgctgg cgactttgtg catgtcaacg ccggctggcc gaacttctag
      781 aagtttggtt tgccacgcgg cactagggtc attgcgatca cgtgttcgac aaacaatcgt
      841 atcccactgc ggcaggattt cgatatcgaa cccataggca tgggccagtc gggttgtgtc
      901 ttcaatcgta cgctgggtcg tttgagcatt ggcgtgcagc agttgtgccg cacgccaaac
      961 gttacttaag ctactggttg tcatacacgg gcttataggc catctcacgg atgtgggcct
     1021 ctacatcttt gggcttttta acccgagcca ggccttgctc aaaaatgtag tcagcgattc
     1081 tggccgcagt atgaagtgag gccgtcaata tctgagactg aggcgggtag atcaggcctg
     1141 aatcaagttc ttgttgtgtg acctgctcgg caaccgcttt ggcggccacg atgaacattt
     1201 gttcggtgac gcgtgtggct tcagtggcca gaaccgccat tcccatcgct gggaagatat
     1261 acacgttgtt gccctggccc ggtacaaagg ttttgtcttt gatcttgacc ggatcaaatg
     1321 ggctgccact cgcgaagatg gcgttaccgt cagaccattg gtaggcttct tgcgctgtgc
     1381 attcagaccg tgatgtggga ttggaatagg ggaagatgat gggtcgtgcg ttgatgcgcg
     1441 acatggtctc aatgacctgc tgattaaaca gcttgggtac agtacttacg ccgataatcc
     1501 cggtgggttt aatgtcgttg atggcatcaa taaatgattt gcatggcgcg tgtttgtgcg
     1561 caaatggctt ttgaaagtcg gctaagtcct tgcgactcga ttcgaccaga ccattaatat
     1621 caaatagcca gttgcgcgcg cgtgcttgtt caatggtcaa gccttccatc accatggctt
     1681 cactgatcaa ttcagcaatc cccgtggcgg cagaccctgc acccatgaat agaaagcgtt
     1741 gatcggtgag tttgccgcca gaaatgcgca gagcaccata aatgccagcc aatgccacgc
     1801 cagcagtacc ctggatgtca tcgttatagg tgcagatttt gtctttgtaa gtgttcagta
     1861 taggcactgc attgaaattg gcgaagtcct cccactgcaa gcaacacttt ggatagagtg
     1921 actgaactgc atcaacaaac tcggcgataa aggcgtcata ctcctcgcca cgtacgcgtg
     1981 gctgtcttaa cccaaggtag agcgggtcgt tgagcaggtc ttgattattc gttcccacgt
     2041 ctagcgtgat gggtaacgtc acggctggtg gaacacccgc aactgccgtg tagagcgcga
     2101 gcttgccaac cgggatgccc atgccgccca cgccaagatc accaagaccg aggatccgct
     2161 caccatcggt ggcgacgata aagcgaatat ctttgattgg ccagttcaat agcagttctt
     2221 tcagacggcc cttggcgctg atgggcaagt aaataccgcg cgatgcccga aaaatgtgat
     2281 cgtacttctg gcaggcttct cccacggtag gtgtgtatac caacggcata aaccgcgcgg
     2341 gatcactcat gatcacggcg taaaagagcg tttggttacg gctttgcaaa tccatcaagt
     2401 acaggtagca ctgaaggtct gactccaaca tgtcgagttg ggtgtgcaca cgcgccattt
     2461 gcaattccag cttgtctaca ccaacgggca atagtccctc tatgccagcg gcctgtcgtt
     2521 cttcgaccgt gaaagccgta ccacgattga gcacggggtc atgcaggatg ttcagaccgc
     2581 gggcggcggt tgcagtcttg agcttggttt tggtggcagg ttttgtattg gcttaggtgc
     2641 tcggttttga gctgggtttt gagctggctt ttgtgttgtc tttcgttttg cttgatgttt
     2701 ttttagaggt ggccatgccg gtttcctgat gttgtcgttg ttaacgtgtc tgtgagtgtg
     2761 gattggtcac tttagatggt tcgcagtaag aggctcactt cgcgacatac gggtgaacca
     2821 tcttggccgg atcaacgatc tcgtcaaact cttgttctga gatatacccg agttccaatg
     2881 ccgcggcttt gagcgtcaaa tcatgatcca tcgcgtggtg agcaattttg gaggctttgt
     2941 cgtaaccaat cacgggtgcc aatgcggtca ccagcatcag tgatcgctcg acatattccg
     3001 cgattttctt gtgattaggt tctgtacctt gaactaaaaa ttgacggaaa ttcgtgcaac
     3061 catccgtcag caacgtaatt gagtgcgtga tgttgtagat gatcagtggc ttgtagacat
     3121 tcatctctaa gtaaccactt gcgccaccga acccgacagc gacatcattg gccatgactt
     3181 gggctgccag catcgtcaag gcttcggctt gagttggatt gaccttgccc ggcatgatcg
     3241 aagagccggg ctc
//
LOCUS       DATBNL010000091         1525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_140742, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000091 DATBNL010000000
VERSION     DATBNL010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140742"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VIC30_01540"
     CDS             complement(<1..428)
                     /locus_tag="VIC30_01540"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEY7803112.1"
                     /translation="MKGLPTTRIKVLALAAVLGVSGVLAGCAPVIVGGAAATTALVAT
                     DRRTVGQQVSDKEINLKISNEVQTKFGQTARIDVSSYDGVVLLTGDAFSEKIRGEAAA
                     IAAATPQVKSVINRLSVGPLASFSQIMSDTWMSSKVKTTLL"
     gene            complement(425..1018)
                     /locus_tag="VIC30_01545"
     CDS             complement(425..1018)
                     /locus_tag="VIC30_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEY7803113.1"
                     /translation="MTLTEHLQQHFDDHLRTTERARAELIPALDQAIALCHAAVTGKQ
                     RILACGNGGSASDAQHFVAELVGRFERERQPLAAVSLSTDTSILTAVGNDYGFDQVFS
                     RQVQALGQPGDVLIGISTSGNSPNVLRAIEHAHAIGMQVIGLTGRDGGAMAKQLTSAD
                     VLLCVPDPRTMRIQEMHILLLHLICEGIDTLLLGANK"
     gene            complement(1081..>1525)
                     /locus_tag="VIC30_01550"
     CDS             complement(1081..>1525)
                     /locus_tag="VIC30_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006462430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HEY7803114.1"
                     /translation="DLHADGHMTLTSAPIQPLETPVGVLLAPDPMDSSDWLLRHKTTD
                     RALYDAAWKQAVALGAFDMLFFNERDELTEGARSNVFVNLEGRWYTPPVTAGVLPGVM
                     RSVLLEDAQLDARIATISRHDLARAEGLMICNALRGALPAQIVSD"
BASE COUNT          355 a          412 c          423 g          335 t
ORIGIN      
        1 agcagcgtgg ttttgacttt ggaggacatc cacgtgtcgg acatgatttg gctaaatgat
       61 gccaatggac cgacagataa acggttgatg acggatttca cctgtggagt ggcagcggca
      121 atggcggcag cttcaccacg aattttttca ctgaaagcat caccggtgag taaaaccacg
      181 ccatcgtaag acgagacgtc tatgcgagcg gtctgcccga atttggtttg tacttcgttg
      241 gagattttaa ggttgatttc tttgtcgctg acctgctgac caacggtacg tcggtcagtg
      301 gcaacgagtg ctgttgtggc tgcagcaccg cccacgatca caggcgcaca accggccaat
      361 acgccagaaa ctccaagcac cgcagctagg gcgagtactt tgatgcgcgt tgttggtaat
      421 cctttcattt gtttgctccc agcaaaaggg tatcaatgcc ttcgcagatc aagtgcagca
      481 gaagaatatg catttcttga atacgcatgg tacgcgggtc tggcacacag agcagcacat
      541 cagccgatgt cagttgcttg gccatggcac cgccatcacg tccggtcaga ccaatgacct
      601 gcatgccaat cgcatgcgcg tgctcgatgg cgcgcagcac gttcggtgaa ttgccgctgg
      661 tagaaatacc gattagtaca tcacccggct gtccaagtgc ttgaacttga cgagaaaata
      721 cctggtcaaa cccgtaatcg ttacccacgg ccgtcaggat agaggtgtct gtcgatagcg
      781 acacggccgc caacggctgt cgctcgcgct cgaagcggcc cacgagttcg gccacaaaat
      841 gctgggcgtc tgaggccgag ccaccgttac cgcatgcgag aatgcgctgc ttgcccgtca
      901 ctgccgcgtg acaaagcgca atggcctgat caagcgccgg tatcagctcg gctcgcgcgc
      961 gctcggtggt gcgcaaatga tcatcaaaat gctgctgtag gtgttccgtt aaggtcatga
     1021 cggcacatcg taaataatag aacggtcatt atctcacgct cgtgcggcgg tgcagcgttt
     1081 ttagtcggaa acgatctgcg ctggcagtgc accacgcaag gcattacaaa tcatcaagcc
     1141 ttcagctcgg gccagatcat gacgtgaaat ggtggcaatt cgggcatcta gctgcgcatc
     1201 ttcaagtagc actgagcgca tcacaccggg caaaaccccg gctgtgacgg gcggggtgta
     1261 ccaacgcccc tctaggttga cgaacacatt actgcgcgcg ccctcagtga gttcgtcgcg
     1321 ctcgttaaaa aacagcatat caaaagcacc aagcgctacc gcctgtttcc aagcagcgtc
     1381 gtataaggcg cgatcggtgg ttttatggcg taacaaccaa tcgctcgagt ccataggatc
     1441 tggcgccaat aaaacgccta ccggcgtttc tagtggttgt atcggtgccg atgtcagggt
     1501 catgtgacca tcggcgtgta agtcg
//
LOCUS       DATBNL010000092         3983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_180447, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000092 DATBNL010000000
VERSION     DATBNL010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3983
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180447"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1292
                     /gene="aceE"
                     /locus_tag="VIC30_01555"
     CDS             <1..1292
                     /gene="aceE"
                     /locus_tag="VIC30_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013393359.1"
                     /note="E1 component; part of pyruvate dehydrogenase; forms
                     a complex with DlaT and LpdC; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEY7803115.1"
                     /translation="RRTHADEKLKVPALEVFRPVLDPTPEGREISTTQAFVRALNQVL
                     RDKEIGPRVVPILADESRTFGMEGMFRQIGIYAPEGQKYTPVDKDQVMYYKESSNGQL
                     LQEGINEAGAFSSWIAAATSYSTNNRIMIPFFIYYSMFGFQRIGDLAWAAGDMQARGF
                     LLGGTAGRTTLNGEGLQHEDGHSHLLSSVIPNCVSYDPTFAHEVAVIMQSGLKRMVEN
                     QENVYFYITLMNENYAQPGLKTGDEEGILKGMYLLQAAELKDKKAPKAQLLGSGTILR
                     EVMAAAELLRDDWGVAADVWSATSFTELRRNGMDCERHNMLHPGAKTQVPYVTQLLEK
                     TEGPIVASTDYMKIFSDQIRPYIPQGRRYKVLGTDGFGRSDFRYKLREHFEVDRHFVV
                     LATLAELASEGKVDKDAPAKAIAKYGINPDKPNPAHA"
     gene            1315..2664
                     /gene="aceF"
                     /locus_tag="VIC30_01560"
     CDS             1315..2664
                     /gene="aceF"
                     /locus_tag="VIC30_01560"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006408537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEY7803116.1"
                     /translation="MSELTAVKVPDIGDFKDVEVIELLVNVGDTIEPEQSLITVESDK
                     ASMEIPASTGGVVKQIDIKIGDKINEGSVILQIEAGAAAASAPAKDDKPAQEPVQEPA
                     KEAPKADSAPAPAAAPAPAAPAPVPAPAPPTAAIEVPASTGQLPHASPSVRKFARELG
                     VDLTKVSGSGPKGRITQTDVQQFVKGVMQGGAAAPATAGSGGSGVGLDLLPWPKVDYA
                     KFGEIEAKPLSRIKKISGANLHRNWVMIPHVTNNDEADITELEALRKTLNKEHERDGI
                     KVTMLAFLIKAVVAGLKKYPEFNASIDGDNLVLKRYYNIGFAADTPNGLVVPVITDAD
                     KKGVLELAQETSAMAKLARDGKLSPAQMQGGCMSISSLGGIGGTHFTPIINAPEVAIL
                     GVSKSFMKPVWDGKQFEPRLTLPLSLSYDHRVIDGAAAARFNAYLGQLLADFRRIIL"
     gene            2674..>3983
                     /locus_tag="VIC30_01565"
     CDS             2674..>3983
                     /locus_tag="VIC30_01565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7803117.1"
                     /translation="MSKEIHVPNIGDFKDVEIIEILVSEGDTIEAEQSLITVESDKAS
                     MEIPATDAGKITKLLVKVGDKVNEGSPIAQIEEVAGGAAAPAAAPKADAPKSEAPKAE
                     TAKSEPAPAAAVPAAPVTATPPKGPLVVLGAGPGGYSAAFRAADLGMEVILIERYPTL
                     GGVCLNVGCIPSKALLHTASVMEEAQGMAAHGISFGKPEIDLDKLREFKSGVIGKLTG
                     GLAGMAKARKVRVVNGVAEFTGPNSIEVKTEKGSETIEFGQAIIAAGSQSVKLPFMPD
                     DPRVVDSTGALELAAIPKRMLIVGGGIIGLEMGTVYSALGARLDVVEMLDGLMLGADK
                     DLVKVWIKKNEHRFDNIMLKTKTVGAEAKKDGIHVTFEGEGENSAAPKEPQVYDLVLQ
                     AVGRSPNGKKIAADKAGVAVTDRGFIEVDNQMRTNVPHIFAIGD"
BASE COUNT          944 a         1064 c         1140 g          835 t
ORIGIN      
        1 agcgtcgcac gcacgccgat gaaaaactca aggtcccggc actcgaggtc tttagacccg
       61 tgcttgatcc cacgcccgaa ggccgcgaga tttccaccac gcaagccttt gtgcgtgcac
      121 tgaaccaagt gctgcgtgac aaggaaatcg gcccacgcgt ggtgccgatc ttggctgatg
      181 agtcgcgcac cttcggcatg gaaggcatgt tccgtcaaat tggtatctat gccccagagg
      241 gccagaaata caccccggtc gataaagacc aggtgatgta ctacaaagag tcgagtaacg
      301 gtcagttact gcaagaaggt attaacgaag cgggtgcgtt tagctcctgg attgcggctg
      361 ccacgtcgta ttcgacgaac aaccgcatca tgatcccgtt ctttatctac tactcgatgt
      421 ttggtttcca gcgcatcggg gatttggctt gggcagctgg cgacatgcag gcacgcggtt
      481 tcttgctcgg tggcaccgcc ggtcgcacca cactaaacgg cgagggtttg cagcacgaag
      541 atggtcacag ccatctgctg tcttctgtca tcccgaactg cgtgtcgtat gacccgacct
      601 ttgctcatga agtcgctgtg atcatgcaaa gcggcttaaa gcgcatggtc gagaatcaag
      661 agaacgtgta tttctacatc acgctcatga acgagaacta cgcccagcct ggtcttaaga
      721 ccggtgacga agaaggcatt ctcaagggca tgtatctgtt gcaagccgct gagctaaaag
      781 acaagaaagc gcctaaggca cagttgttgg gttctggcac catcttgcgc gaagtcatgg
      841 ccgcagccga gctcttgcgt gacgactggg gcgtggctgc cgacgtttgg agcgccacga
      901 gctttaccga gttgcgtcgc aacggcatgg actgcgagcg tcacaacatg ctgcacccgg
      961 gtgccaagac acaggtgcca tatgtcactc agttactaga aaaaaccgaa ggtcccatcg
     1021 tcgcttcgac cgactatatg aagatcttct cagatcagat tcgtccctat attccacaag
     1081 gacggcgcta caaggttctg ggtacagacg gttttgggcg ttcggatttc cgctacaaac
     1141 tgcgcgaaca ctttgaagtc gaccgtcact ttgtggtgtt ggcaacattg gcggaacttg
     1201 caagtgaggg caaggtagac aaagacgcac cggccaaggc gatcgccaag tacgggatca
     1261 accccgacaa acccaaccca gcacacgcct aaccgtcgag caggagacaa agccatgagc
     1321 gaattaacag cagtcaaagt gcccgacatt ggtgacttta aagacgtgga agtcatcgag
     1381 ttgctggtca acgttggtga caccattgag cctgaacaaa gcctgatcac ggttgagtcc
     1441 gataaggcgt caatggaaat ccccgcctca accggtgggg tggtcaagca aattgacatc
     1501 aaaatcggcg acaaaatcaa cgaaggcagt gtgattttgc agatcgaggc cggtgccgca
     1561 gcagcgtcag cgccagccaa agatgacaag ccagcccaag aaccagtcca agaaccagct
     1621 aaagaagcac ccaaggccga tagcgccccg gcgccagccg ctgcgccagc tcctgctgca
     1681 cctgcgccgg taccagcacc agcaccgccc acggctgcca tcgaagtgcc cgcgtcaact
     1741 ggccaactgc cgcatgcctc accttcggtg cgcaagtttg cgcgcgagct tggtgtggac
     1801 ttaaccaaag tctcgggttc aggtcccaaa ggccgtatta cccagaccga cgtgcagcag
     1861 ttcgtcaaag gtgtgatgca gggcggggcg gctgcacctg cgaccgctgg ttcaggcggc
     1921 tctggtgtgg gtctggatct cttgccttgg cccaaagtcg attacgccaa gttcggtgaa
     1981 atcgaagcca agccgttgtc gcgcatcaaa aagatttctg gtgccaactt gcaccgtaac
     2041 tgggtgatga ttcctcatgt caccaacaac gatgaagccg acatcaccga actcgaggcc
     2101 ttgcgcaaga ccttgaacaa agagcatgag cgcgacggca tcaaagtcac catgctggcg
     2161 tttctgatca aggccgtggt ggctgggtta aagaaatacc ccgagttcaa tgcctccatt
     2221 gacggtgaca acttggtgtt aaagcgttac tacaacattg gctttgcagc cgacacgccc
     2281 aatggcttgg tggtgcccgt tatcaccgac gctgacaaga agggtgtgtt ggaactcgcg
     2341 caagaaacat cggccatggc caagctcgca cgtgacggca agctgtcacc agcgcaaatg
     2401 caaggcggtt gtatgtcgat ttcttcactc ggtggcattg gtggcacgca cttcacgccc
     2461 atcatcaacg cacccgaagt ggcgatcttg ggcgtgtcca agtcgttcat gaaaccggtt
     2521 tgggacggca agcagtttga gccacgcctg acattgccgc tgtcactgtc ttacgatcac
     2581 cgtgtgatcg atggggcggc tgccgcgcgt ttcaatgcct atctgggtca actgttagcc
     2641 gactttcgtc gcatcattct ctaagggggc actatgagca aagagattca tgtccccaat
     2701 attggcgact tcaaggatgt tgagatcatc gagatcttgg tttctgaagg cgacaccatt
     2761 gaagccgagc agagcctgat tactgtggag tctgacaagg cgtccatgga aatcccggcc
     2821 accgacgcag gcaagatcac caagctgttg gtgaaagtcg gtgacaaggt caacgaaggc
     2881 tctcccattg cgcaaatcga ggaagtggcc ggcggcgctg ctgccccagc tgcagcaccg
     2941 aaagccgatg caccaaagtc tgaagcacca aaagctgaaa ctgcaaagtc tgaacccgcg
     3001 cctgctgcag ctgtgccagc tgcgccagtc actgccacac cacccaaggg cccgttggtc
     3061 gtgttgggcg ccggtccagg cggctattca gcggcgtttc gtgccgctga ccttgggatg
     3121 gaagtgatcc tgattgagcg ttatcccaca ctgggtggcg tgtgtctgaa cgttgggtgc
     3181 atcccgtcaa aggctttgct gcacacggcc tctgtcatgg aagaagcaca gggcatggcc
     3241 gcgcacggca ttagcttcgg taagcctgag atcgatctgg acaagctgcg tgagtttaag
     3301 tcgggcgtta ttggcaagct caccggcggt ctggctggca tggcaaaggc tcgcaaagtg
     3361 cgcgtggtca atggcgtggc tgaatttact ggtcccaact cgattgaagt taagacagag
     3421 aaaggcagtg aaacgattga atttggtcag gccattattg ccgctggtag ccaatcggtg
     3481 aaattgccgt ttatgcctga tgatccgcgc gtggtcgact ccaccggcgc tttggagttg
     3541 gcagcgattc ctaagcgcat gttgattgtc ggtggtggca tcatcggtct tgagatgggc
     3601 acggtttact cggcattggg tgcacgactt gatgtcgtgg aaatgctcga tggcttgatg
     3661 ctgggtgctg acaaagattt ggtcaaagtc tggataaaaa agaacgagca tcgctttgac
     3721 aacatcatgc tcaaaaccaa gaccgtgggt gctgaagcca aaaaagacgg tattcacgtg
     3781 acttttgaag gcgagggcga gaattcagct gcaccgaaag agcctcaggt ctatgacctg
     3841 gtgctgcaag cggtgggtcg atcaccgaac ggtaaaaaga ttgccgctga caaggcaggg
     3901 gttgcggtga ccgatcgtgg tttcatcgaa gtcgataacc agatgcgtac caacgtgccg
     3961 catatcttcg ccattggtga cat
//
LOCUS       DATBNL010000093         1929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_140765, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000093 DATBNL010000000
VERSION     DATBNL010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140765"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..689
                     /locus_tag="VIC30_01570"
     CDS             231..689
                     /locus_tag="VIC30_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011903882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1134 domain-containing protein"
                     /protein_id="HEY7803118.1"
                     /translation="MNALSMKRLAGSLAAMGAMTLAGGAVLAESPKKPVAQVSIDETQ
                     FGFILGGSTGGGVLTYEGEKHTFKMGGVSLGANIGVSKFSATGQVYDMTDLSQFEGTY
                     VRLTGSVALGGGMGDMTLKNENNVIMSLKGTTQGLQLNAGASGVTVKFEK"
     gene            902..>1929
                     /gene="otnK"
                     /locus_tag="VIC30_01575"
     CDS             902..>1929
                     /gene="otnK"
                     /locus_tag="VIC30_01575"
                     /EC_number="2.7.1.217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019427356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxo-tetronate kinase"
                     /protein_id="HEY7803119.1"
                     /translation="MTSIALGCIADDFTGATDLANNLVRAGMRVVQTVGVPDAPLDVS
                     VDAVVVSLKSRTIAPNQAVAQSLAALQWLKQHEAKQIYFKYCSTFDSTEQGNIGPVID
                     ALMAALGTDFTVATPAFPDAGRTAYRGYLFVGDVLLNESGMQDHPLTPMRDPNLVRVL
                     KPQTQHAVGLVDYRASMDSAQAIEARFAQLRSDGVGVAIVDALNNEDLHRLGRACAQL
                     PLVTGGSGVAIGLPANFGIEPNAGAAVLPPASGKQAIVSGSCSRATQAQVAAFIERGG
                     HAIALDPVSLSQDPSKLDAYIEQALGALTNKPVLVYTTTTPEQLSHVQATLGAMAAGD
                     MVEQWLAQ"
BASE COUNT          450 a          471 c          567 g          441 t
ORIGIN      
        1 caaggtggca tgcagctgca aaacagcaaa ggcgtgatca tgcgcttgca agccacaacc
       61 aaagggcttc agttcaatgt gggcgccggt ggtgttaacg tgtactttga taaaaagtaa
      121 gtaatacgga cgacctaccg ctgtgacgct atgacgctag ccgcacgtga gtgtggctag
      181 cgctgtttta ttcacagatt ctttttaagc acaacacaag gaaatacaag atgaatgctc
      241 tttcgatgaa acgcctggca ggttcactgg cagccatggg tgcaatgacg ctagccggcg
      301 gcgccgtgtt agccgaatcc cctaaaaagc cagttgccca agtcagcatt gacgaaactc
      361 agtttggctt catcttgggt ggcagtactg gtggcggtgt gctgacctat gagggcgaga
      421 agcacacctt taagatgggt ggtgttagtt taggtgccaa cattggcgtg tctaagttct
      481 cagcgacggg ccaagtctat gacatgaccg atttgtcaca gtttgagggt acctatgtgc
      541 gcctgaccgg ttccgttgcg ttgggcggtg gcatgggtga catgaccctc aaaaatgaga
      601 ataacgtcat catgagcttg aaaggcacca cgcaaggttt gcaattaaat gccggtgcca
      661 gcggtgtgac ggtcaaattc gagaagtagg atgtggaaat gaatagtggc gaatagtagg
      721 gtctaatgcg actgattcaa cgacataggg cttgccgcaa ggcaagccct atgtcgttgt
      781 ggtgctcgat atttcaccta acgggtcatg atggcatgtc tggacgatat gcaagttcac
      841 gacaactgag gcatactttg gtgaacaaac ctcacaacaa cacaaaggca agaggcaggc
      901 tgtgacttca atagcgctag ggtgtattgc agatgacttt accggggcca cggatttggc
      961 caacaatctt gtacgtgccg gcatgcgggt ggttcagacc gtcggtgtgc cagatgcgcc
     1021 acttgacgtc agtgtggacg cggtggtcgt gtcgttaaag tcacgcacca ttgccccaaa
     1081 tcaagcggtg gcgcagtcgc tcgcagcatt gcagtggctt aagcaacacg aagcaaaaca
     1141 gatttacttc aagtattgct cgacttttga ctcgactgaa caaggcaata ttggacctgt
     1201 gatcgatgcc ttgatggctg cgttaggcac ggacttcacg gtggccacgc cggctttccc
     1261 agacgctggc cgcacagcct accgtggtta tttgttcgtg ggcgatgtat tgctcaacga
     1321 aagcggcatg caggatcatc cactaacacc catgcgtgat cctaacttgg tgcgtgtttt
     1381 gaaaccgcag acgcagcacg ctgtgggctt ggttgattac cgcgcgagca tggatagtgc
     1441 gcaggcgatc gaggcaaggt ttgcacagtt gcgcagcgac ggtgttggcg tggccattgt
     1501 tgacgcatta aataacgagg acttgcatcg actcggtcga gcatgtgctc agttgccgtt
     1561 ggtgactggg ggctcgggcg tggccatcgg cttgccggca aacttcggga ttgagccaaa
     1621 tgccggggcg gccgttttgc caccggcttc tggcaaacaa gccattgtgt cgggcagttg
     1681 ctcgcgagcc acgcaggcac aagttgctgc attcatcgag cgaggcggtc acgcaattgc
     1741 acttgatcct gtctcgctga gtcaagatcc gagcaagctg gatgcctaca ttgagcaggc
     1801 acttggcgca ttaaccaaca aacctgtgtt ggtctacacc actaccaccc ccgaacagct
     1861 ttcgcatgta caggccacgc ttggcgccat ggccgccggc gacatggttg agcaatggtt
     1921 ggcgcagga
//
LOCUS       DATBNL010000094         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70916, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000094 DATBNL010000000
VERSION     DATBNL010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70916"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1068)
                     /locus_tag="VIC30_01580"
     CDS             complement(<1..1068)
                     /locus_tag="VIC30_01580"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY7803120.1"
                     /translation="MPSNQTHPVDQARLYLSKGKADQAVRLLKKHLKIEPQSAPAHHF
                     LGLAQYQQGQHSAAAQSVAQAIALDRADPVMHHNAGLICLALEQHKEAVAAFERAIAL
                     DANYAEAWFNRGNAYRQLGQETLARQDFQQTLAIDAFFADAHNNLGLSFKRTGELDAA
                     VAAFDRCLQIQPNHYLAMNNLALAKQSLGELKHAQQLFESALALVPTYAVAHINLGHL
                     LQQQGDFNGAVEHYQAAYKLVPTLDLLAGYLAQSKGMVCQWQGLEQLWQTIEKQITKG
                     LLPCTPFALLGGIDSLALSQKLASGYAKRHIPDLGLEAFEASTPAAGKRKLRIGYLSS
                     DFKDHPVAYLTVGIIENHSRDD"
     gene            1400..>1933
                     /locus_tag="VIC30_01585"
     CDS             1400..>1933
                     /locus_tag="VIC30_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010809830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEY7803121.1"
                     /translation="MINKIVPGVAEAVAGIQDGSTVLVGGFGGAGQPMALIDALIEQG
                     AKELTIVNNNAGNAEIGLAALMKAGRVRKIICSFPRQADSYVFDELYRSGKLELELVP
                     QGTLAERVRAGGAGIGGFYTRTGVGTMLAQGKEVRTIDGEDYLFEAPIKADVAFIKAK
                     SGDRWGNLTYNKTARNFG"
BASE COUNT          452 a          491 c          553 g          437 t
ORIGIN      
        1 atcgtcacgg ctatggtttt ctatgatgcc cacggtgaga taggcgaccg ggtggtcctt
       61 gaaatcactc gacaagtagc cgatgcgtaa cttgcgtttg ccagcggccg gcgtcgatgc
      121 ttcaaatgcc tcaagcccaa ggtcggggat atggcgtttg gcgtaaccac tggcgagttt
      181 ttggctcagt gccagactat caatgccacc gagcagagca aagggcgtgc agggcagaag
      241 gccttttgtg atttgtttct caattgtctg ccaaagctgt tccagacctt gccactgaca
      301 caccatgcct ttggactgag cgagatagcc agctagcagg tcaagcgtgg gcacaagttt
      361 gtaggcggct tggtagtgct caacagcccc attaaagtcg ccctgttgtt gcagcaagtg
      421 accaagattg atgtgtgcca ccgcgtaggt tggaacaagc gccagtgccg attcaaacaa
      481 ctgctgcgcg tgtttaagct cacccaatga ttgcttggcc aatgccaagt tgttcatggc
      541 gaggtaatga ttgggctgaa tctgcaggca acggtcaaac gcggccaccg cggcgtcaag
      601 ttcaccggtt cgtttgaaag acaaaccgag attgttgtgt gcatccgcaa aaaacgcatc
      661 aatggccaag gtctgttgaa agtcttggcg agccagtgtt tcttgaccga gttgtcggta
      721 ggcattgcct cggttaaacc aagcctcagc gtaattcgcg tccaacgcga ttgctcgctc
      781 aaacgctgct acagcttctt tgtgctgctc aagtgccaga cagatcagcc cagcgttgtg
      841 atgcatcacc ggatccgcgc ggtctagtgc aatggcttga gccactgatt gcgccgccgc
      901 gctgtgttga ccttgttggt attgagccaa tccaagaaag tgatgggcag gcgcagattg
      961 gggctcgatc tttaagtgtt tctttaatag gcgcacggcc tgatcggctt tgccttttga
     1021 taggtaaagt ctggcttgat caactgggtg ggtctgattt gagggcatgc gcagtcaaac
     1081 tcgcgttaaa accgtttaag aaggcctcat gggatgcgaa cacacggtaa ggggcgtgat
     1141 tgtgcacagt aaattaagac aaaccaagca aaacaaacca agcaaaaccg cgcccgatga
     1201 cgccattccg agacaaggtc gagtatacgc cgtcaggatg ttggggtctt caagtgctcg
     1261 cctcgcaaaa tagttgcaaa tatcgacctc acacccggct gcagcacatc acaaccctat
     1321 acaaccacca gcgggcaccg aacagttgtc tacccatgta gactcggctt catccattca
     1381 tttgtgaaac aggtggacca tgatcaataa aatcgtaccg ggtgtggccg aagcggtcgc
     1441 cggcatccaa gatggctcga ctgtgctcgt gggcggcttt ggtggcgctg ggcagcccat
     1501 ggcactcatt gacgcgctca ttgagcaagg cgccaaagag ctgactattg ttaacaacaa
     1561 tgccggcaat gcagaaattg ggctagccgc gctcatgaaa gctgggcgcg tgcgcaaaat
     1621 catttgttcg tttccgcgcc aagccgactc ttacgtgttc gacgaactgt atcgctcggg
     1681 caagctagag ctcgaactcg tgccgcaggg cacgttggcc gaacgggtgc gtgctggtgg
     1741 cgcgggcatc ggtgggtttt acacccgcac tggcgtgggc acgatgttgg ctcaaggcaa
     1801 agaggtgcgc accatagacg gcgaagacta cttgtttgag gcgccaatca aagcggacgt
     1861 ggcatttatc aaagccaagt ctggtgatcg ttgggggaat ctgacgtata acaagaccgc
     1921 acgcaatttc ggg
//
LOCUS       DATBNL010000095         3562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_70933, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000095 DATBNL010000000
VERSION     DATBNL010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70933"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1864)
                     /locus_tag="VIC30_01590"
     CDS             complement(173..1864)
                     /locus_tag="VIC30_01590"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY7803122.1"
                     /translation="MTPPETDPGPTAESAQTAATPQTPQPPQTPRMVRKSKGRFWLVW
                     LLPLVASLIGLSIVWHDWSNRGPTISIELDSASGLEAGKTQIKFRDVVVGTVTAIRLS
                     DSGNEVIVDAELNIDARGLATEGTTFWAVRPTIGLSGVSGLSTLLSGVYINADTKSFR
                     SKAPQKLEFKALAQAPAIASDRPGSAFKLRSDTLGSLGPGAPVYFLRIPVGVVTKYEL
                     DDNGTFVDIEVFVDAPYDKYVGGNSRFWDESGVYVNVGSDGLTVSTESLVSILAGGLA
                     FGNFGPSLPLPADHQFKLYADKASASEIPAGLAVPVTMRFYQTTKGLEVDAPVTFQGV
                     EIGIVTAADLDFDIYKGAFFTHVKATLYPARLGSVFESMQQANRTPEQVTESLAFMVR
                     RGLRAQLKTANLLTGGMYISIALEKDATPIDSVQAKMPLELPTITTEGFDDIQKQVAS
                     ILESIDNIPFDKLSTDLSDSLTELTALTKTLNTSLSPELIETLQGLQGTLTKIDGFLV
                     SSDELPGHLDNSLEEIDKAVRATRALIDELRAQPNSIIFGEPAPTYSRETLGDTN"
     gene            complement(1884..3068)
                     /locus_tag="VIC30_01595"
     CDS             complement(1884..3068)
                     /locus_tag="VIC30_01595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEY7803123.1"
                     /translation="MSATASQLSCHHCGALYRRVPVEKDHVAMCHRCDSVLETYSNLG
                     ASGWCAIAITAVITFIMANAYPVGILLVQGTGQSATFLDTVIVAWEAGFPWVAALTGA
                     TGFVLPALHLCLLLWILVPLSFGRVAPGFERALTIIDRLTPWSMVPVFLLGALVAIVK
                     LVDLATFELGVGLWATVATAVLLTGLLRLDAQKLRHMAQDDGLEVANAHVHPAPSPRQ
                     INRTWALLVTAVILYIPANMLPIMYVHAINGSSGHTILGGVIELWQGGAYDIALVVFI
                     ASVFVPVLKLFALGVLVWLTQKRSSLNLKARTKIYGMVEFIGQWSMLDVFVVILLSAL
                     AKFGNLLDIAPGAGAAAFGGVVVLTMIAAMGFDPRLSWRLAGHRRHLAWGRDPAATRP
                     QT"
     gene            complement(3076..3360)
                     /locus_tag="VIC30_01600"
     CDS             complement(3076..3360)
                     /locus_tag="VIC30_01600"
                     /inference="COORDINATES: protein motif:HMM:NF024600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEY7803124.1"
                     /translation="MTKTLQALSSALLFSAIAPLAIAQNTSNMPPPPANEAEITARFN
                     AADKNGDGKVTREEAQGTMPRVAMAWEKIDIDKKGYITLEQLLIISANNQ"
BASE COUNT          814 a          907 c         1040 g          801 t
ORIGIN      
        1 gggttcagat tagcaagagc agcttgcggt ggtgcattta agtcatagtg catcgtggtg
       61 gttgtgctgc aggctgccaa caacagagtg ccagccaata ctgtggcgag aactgaaccc
      121 ctgcgccagg cagtctggat agcgggtctt gatgtttgtt tggcggattg tctcaattgg
      181 tgtctcctag cgtttcgcgc gagtaggtgg gggcgggctc accgaagatg atggagttgg
      241 gctgagcacg tagctcgtca atcagagccc gcgtggcgcg caccgctttg tcgatttctt
      301 caagactgtt gtctaggtga ccgggcagct catcactaga gaccaagaat ccatctatct
      361 tggtaagcgt gccttgcaag ccttgcagtg tttcaatcaa ctcgggactt aacgaggtgt
      421 ttaaggtctt ggtcagggcc gtgagctctg ttagtgagtc gctgagatca gtcgacagtt
      481 tgtcaaacgg gatgttgtca atgctctcga gaatagacgc gacctgtttc tggatgtcat
      541 caaatccctc ggtggtaatc gtgggtaatt ccaagggcat cttggcttgg acactgtcga
      601 ttggggtggc gtctttttct agtgcaattg aaatatacat accaccggtc aacaggttgg
      661 cggtctttaa ctgcgcacgt agcccccgtc tgaccatgaa cgccagtgat tcggtgacct
      721 gttcaggggt gcggttggct tgctgcatgc tctcaaacac ggatcccagg cgcgctgggt
      781 agagtgtggc tttaacgtga gtgaaaaacg cccctttgta gatatcgaag tccaaatcag
      841 ccgccgtcac aatgccgatt tcaacacctt gaaaggtcac tggagcgtcg acttctagac
      901 ccttagtcgt ttggtaaaaa cgcatggtca caggtacagc cagcccagcc ggtatttcac
      961 tggcggatgc tttgtcggca tacagcttga actgatggtc ggcaggcaac ggcagcgatg
     1021 gcccaaaatt gccgaacgct aagccgccag ccaagatcga gacaagtgac tccgtcgata
     1081 ctgttaaacc gtcactgccg acattgacat agacaccgct ttcgtcccaa aagcggctgt
     1141 tgccgccaac gtacttgtca taaggggcat ccacaaagac ttcaatgtcg acgaaggtgc
     1201 cgttgtcatc aagttcatat ttggtgacta ccccaaccgg gatgcgcaag aaataaaccg
     1261 gtgcgccagg ccctaatgaa ccgagcgtat cagaacgcaa cttaaacgct gaaccaggtc
     1321 ggtcactggc aatggctggg gcttgtgcca aggctttgaa ctcgagtttt tgaggggcct
     1381 tgctgcgaaa cgacttagta tcggcattga tgtagactcc agagagcagg gtcgataaac
     1441 ctgagacacc acttaaaccg atggtgggtc gcactgccca gaaagtggtc ccttctgtgg
     1501 ctaaaccgcg ggcatcgatg tttagctcag cgtcgacgat gacttcattg cccgagtcgc
     1561 ttaggcggat ggcggtgacg gtgcccacca ccacatcacg aaacttgatc tgcgttttac
     1621 ccgcttctag gccactggcc gagtcgagtt cgatgctaat cgtggggccg cggtttgacc
     1681 agtcatgcca gacgatcgac aagccaatta atgacgcaac caacggtaag agccacacca
     1741 accagaagcg ccccttgctt ttacgcacca tgcgtggggt ttggggaggt tggggtgttt
     1801 gaggtgtcgc agctgtctgg gcggactcag ctgttggacc cgggtcggtt tctggtggtg
     1861 tcataaagcg gtcctgtgta gattcaagtt tggggacgtg ttgctgctgg gtcacggccc
     1921 caggcaagat ggcggcgatg gccggctagg cgccaagaca ggcgtgggtc aaaccccatg
     1981 gccgcgatca tggtgagcac caccacgccg ccgaaggcgg ccgcaccggc accaggtgcg
     2041 atgtctagca agttgccaaa ctttgccagt gctgacagca aaatcaccac gaatacatca
     2101 agcatggacc actggccaat gaattcgacc atgccataga tcttggtgcg ggcctttaaa
     2161 ttcaggctgg aacgtttttg tgttaaccag accaagacac caagcgcgaa gagtttgagt
     2221 acgggcacga acacgctagc aataaacacc acaagggcga tgtcgtaggc gccgccttgc
     2281 caaagctcaa tgacgccacc caagatggtg tgtcccgaag agccgttaat ggcatgcacg
     2341 tacatgattg gtagcatgtt ggctgggatg tagagaatca cggctgtgac tagcaatgcc
     2401 caggtacggt tgatctggcg tggtgatggc gcagggtgaa catgggcgtt ggccacctca
     2461 agcccatcgt cttgcgccat gtgtcgcagc ttctgcgcat ccagacgcag tagtccggtc
     2521 aacagaaccg cggtggcaac ggtggcccaa agtccaacac ctagctcaaa ggttgccagg
     2581 tccacgagct tgacgatcgc taccaatgcg ccgagcaaga acactggcac catggaccag
     2641 ggtgtgagtc tgtcaatgat tgtgagcgca cgctcaaagc caggagcaac tcgcccaaag
     2701 ctcagtggca ccagtatcca aagcaacaaa cacagatgta aggcgggcaa cacaaagccg
     2761 gtggcacccg tgagcgccgc cacccaggga aagccagcct cccaggcgac gatcacggtg
     2821 tctaaaaacg tggccgattg tcctgtgcct tgcaccagca agatacccac agggtaggcg
     2881 ttggccataa tgaaggtgat caccgcagtg atggcgatgg cacaccaacc actggcacct
     2941 aaattactgt aggtttccag caccgagtca cagcggtgac acatcgccac atggtctttc
     3001 tcgacaggca cgcgtctata cagtgcgcca cagtggtggc agctcagttg ggacgcggtt
     3061 gctgacatgg ttgggttact gattgttggc cgaaataatc agcaactgtt cgagcgtgat
     3121 gtagcctttt ttgtcgatgt cgattttttc ccaggccatg gccacacgtg gcatggttcc
     3181 ttgggcttct tcgcgggtga ctttgccatc gccgttcttg tcggcggcat tgaaccgggc
     3241 ggtgatttca gcctcgttgg ccggtggtgg aggcatattg ctggtgtttt gagcgatggc
     3301 cagcggcgcg atggcgctaa atagtaaagc gctcgatagg gcctgcagag ttttagtcat
     3361 ggtgaggatc cggtctgggg ttggacgttc aataacgccg aggagtatgt gaggcagatg
     3421 gatccgttgt tgatggcaca agtcatcgtt tcgcagatgt catgctgaaa tatatacgga
     3481 atctttctta gtatgcgctc atatacgacc aaaagcttgc aaaagcttgc aggaatgacc
     3541 gaagacgact gttggttgcc tg
//
LOCUS       DATBNL010000096         1920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1249, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000096 DATBNL010000000
VERSION     DATBNL010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VIC30_01605"
     CDS             <1..497
                     /locus_tag="VIC30_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012351821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY7803125.1"
                     /translation="EYLSKQQMEFVDPSGNASSEVTEQKIQAVLDGQLRIRQRPGDHN
                     ALGAIKFIFPNNQNIFLHHTPSTHLFARDRRDLSHGCIRVQEPVDLAKFVLEYDADWP
                     EARILEAMEAGQSKTIRLKDPIPVLIGYSTVLARNGEVFFYPDLYGHDATLIKALSRY
                     QGLQ"
     gene            645..1079
                     /locus_tag="VIC30_01610"
     CDS             645..1079
                     /locus_tag="VIC30_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEY7803126.1"
                     /translation="MNHLHTSERIGLIFAVDDQYLDPALNKLNHFLRDHYSNEVGVMD
                     PLLYDLMHQIRRDLGVRRSFDVISGYRSPATNERLRKAGGGGVAKRSLHMDGRAIDVR
                     LPGVPLKELRDAAVSQKVGGVGYYPRDGFVHIDTGKVRTWGG"
     gene            complement(1137..>1920)
                     /locus_tag="VIC30_01615"
     CDS             complement(1137..>1920)
                     /locus_tag="VIC30_01615"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEY7803127.1"
                     /translation="LGKRPDLFKRWLLAFWLIFVTHVLVDYLTVYGTQLLQPFTDYPF
                     GRGSIFIIDPLYTLPLLIGLIACLVSKSSRRFTFNAIGLAVSTMYLIWGLGVQQHVES
                     VARQNLPDTVHPDAKLLVTPSPLNSVLWRVVATSPTHYYEGWHSLLDDEPMINWTEHE
                     RGAQLIAQHSDHPGIARIQAFSHGFYRMDEVDGEVFITDLRMGFEPAYFFNFNMGRPN
                     GTGELDVNRPATQSGLRPDIEKGLPWLWRRLTGQTTEPPPRG"
BASE COUNT          467 a          460 c          535 g          458 t
ORIGIN      
        1 ctgagtatct gagtaagcag cagatggagt ttgttgatcc gtcgggcaat gccagttctg
       61 aggtaactga acagaaaatc caggccgtgc ttgacggaca gttacgtatc cggcaacggc
      121 ctggtgatca caatgcactc ggtgccatta agtttatttt tccgaacaac cagaacattt
      181 ttctacacca cacgccttca acacacttgt ttgctagaga tcggcgtgac ttaagccacg
      241 gctgcatccg tgttcaagag cctgttgatc tcgccaagtt cgtgctggag tacgacgctg
      301 actggcccga agcacggatt ctcgaggcga tggaggcggg tcaatctaaa accattcgct
      361 taaaagatcc tatccccgta ctgattggtt acagcacagt gttggcgcga aatggcgagg
      421 tgttctttta ccctgatttg tatggccacg acgcgacttt gatcaaagcg ttgtcacgct
      481 atcaaggcct acaatgaatg gatagagact tacaggagac agtgatgaga ctgagtcgac
      541 gtcacctcat taaattcggt agcgcatggg cgctaggttc ggttgcagcg ccggccgttg
      601 ccaaactggt caatcccatt ggcgatgtgg gtaaagatat ccagatgaat cacttgcata
      661 cctctgagcg cattgggttg atatttgcgg ttgatgatca gtatctggat cctgcattaa
      721 acaaactcaa ccatttttta cgtgatcact attcgaacga agtgggcgtg atggatccgt
      781 tgctctatga cttgatgcat caaatccgtc gcgatcttgg tgtgcgacgt tcgtttgacg
      841 tgatttctgg atatcgcagt cctgcaacca atgagcgctt aagaaaagct ggtggcggtg
      901 gcgttgccaa gcgcagcttg cacatggatg gtcgtgccat cgatgtgcgt ttgcccgggg
      961 tgccgctaaa agaactgcgt gatgccgctg tcagtcaaaa ggttggcggt gttggttatt
     1021 accccagaga tgggtttgtg cacatcgaca cgggcaaggt gcgcacttgg ggtggttgag
     1081 ggatgtttga aaggcggttg cgattcggca ggttcactgc cgatgaatct attgccttaa
     1141 ccccgcggtg gtggttcggt ggtctgaccg gtcaggcgcc gccacagcca aggtaagcct
     1201 ttctcgatat cgggtctcag gccgctttgc gtagcaggac ggttgacatc gagttcgcct
     1261 gtgccgttag gtcgccccat gttgaagtta aagaagtatg ccggttcaaa ccccatgcgc
     1321 aggtcggtga taaacacctc accatcgact tcgtccattc gatagaaacc gtgactaaac
     1381 gcctgtatgc gcgcaatgcc agggtgatcg ctgtgttgtg cgatcagctg cgcaccacgt
     1441 tcgtgttcag tccagttaat catgggctca tcatcaagca gcgagtgcca accttcgtaa
     1501 tagtgcgtag gtgacgtggc cactacacgc cagagcactg aattcaaagg cgatggggtg
     1561 acgagcagct ttgcgtcagg atgaacggta tcaggcagat tctggcgtgc aactgactct
     1621 acgtgttgct gaacgcctag cccccaaatc aaatacatcg tgctgaccgc gaggccgatg
     1681 gcgttaaacg taaagcgccg tgaagattta gagacaaggc aggcgatgag cccaatgagc
     1741 aacggcaatg tgtagagcgg atcgataata aaaatactgc cacgaccaaa cggatagtcg
     1801 gtaaatggtt gcaacaactg ggtaccgtag acagttagat agtcaaccaa cacatgcgtc
     1861 acgaagatca accaaaacgc gagcaaccag cgtttaaaaa gatcggggcg cttgcctagc
//
LOCUS       DATBNL010000097         5467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_150667, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000097 DATBNL010000000
VERSION     DATBNL010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5467
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150667"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1498
                     /locus_tag="VIC30_01620"
     CDS             <1..1498
                     /locus_tag="VIC30_01620"
                     /inference="COORDINATES: protein motif:HMM:NF014825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SEC-C domain-containing protein"
                     /protein_id="HEY7803128.1"
                     /translation="QKPGRNDPCPCGSGLKFKKCCLTAESTTATTSSGHGATRMRRAE
                     GDLQEPMIEHMLAYYGESSFAEAWDEFSGWEDVPMDADKYPELTTVLMLWILYNWIPD
                     NTDIDEDKWLPEMPVAEHYLHNMGDKLSEFDRHFLLNVMNDPFSYWQATNVVAGQTVT
                     LRDLLRDQTVTVIDRVISQRIDTGAVVYARVVSMANESIFMGLAPIALPPYCAQDLIS
                     YRQRLAQAGHPDLKASPDEAPALTTDILFEYEFELRSYYWQARQMVMNPTPPTLQNTD
                     GELLAPTKLIYRLSCTPTEAFDALASLSLNKKSELLQNGTFNKQGLLESIEFPWQKAG
                     NKQNKAWDNTVLGEIIIRGQSLVIEVNSKERATSIKRRIAQRLKGQAELLDEEIELVQ
                     DMLERKHAGDSSHTEQSLQPSQAETDALLALPEVQEQLRRMKDQHWHDWLDTELPALK
                     GQTPRQASKTPIGRERLEVLLTDFAGKCSGDPTMDPDIGRLRRELGLN"
     gene            complement(1495..1809)
                     /locus_tag="VIC30_01625"
     CDS             complement(1495..1809)
                     /locus_tag="VIC30_01625"
                     /inference="COORDINATES: protein motif:HMM:NF024979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HEY7803129.1"
                     /translation="MSQYQWTSADTQAELLDEQMLELAEVARICCVNQQWLLERIEQE
                     VVQPILRNDTYYFTSATVVRIQQVIHVEQVYDADPQLAALVADLTEEVQRLRNELKRL
                     AD"
     gene            complement(1828..2802)
                     /locus_tag="VIC30_01630"
     CDS             complement(1828..2802)
                     /locus_tag="VIC30_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016452386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HEY7803130.1"
                     /translation="MKLPDYYATLGVDKTASAEDIKKAFRRLARKYHPDVSKEADAAA
                     RMTELNEANAVLSDSAKREVYDQIGHEAWAQGARSVDDVRPPPGREQRYQYSDQGSGF
                     GPDSSEFFEEIFGRTARERSRHDAYRGGQGPAQWDGQDQHADITLTLEQAYAGTQTSL
                     RLSGYDVDAQGQVSTKTRTLDVNIPAGVTEGQLIRLAGQGGPGFGGGKAGDLFMRVHI
                     EAPEGWSVSGRDVTMPVYVSPWEAALGAEVVAKTPAGSLAVNVPAGSVAGRRLRLKGK
                     GIPAGKTAAAGDLMLEIKIAIPGAVTDEQKKAWQALADAYPGFEPRQR"
     gene            3064..3495
                     /locus_tag="VIC30_01635"
     CDS             3064..3495
                     /locus_tag="VIC30_01635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803131.1"
                     /translation="MHKSLICLTSLLLALPMAATAQSWLNLDSSALDEPAPGSATQAI
                     ADMYFNESAQTTSLGSGPIRLVPSYVRPTPLDGVSLFYNADTGSYGRISDIGHGRTLI
                     LDNGPAWVNTEDLTSKNRNRGSLTLVNTHPDGSMSWREILK"
     gene            complement(3522..4043)
                     /locus_tag="VIC30_01640"
     CDS             complement(3522..4043)
                     /locus_tag="VIC30_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803132.1"
                     /translation="MSKKRASTTVPADRTQFVRAASAAGLSSTPGLGALDGKHRSSIG
                     RASKSVARITASVDVDASFNKEEPCATRWDYGIGLLHGAGRESALWVEPHTSCSPSEV
                     KVMLAKLDWLKAKLETPEFAGLKLLTAASIHCGHEPFVWIATSTIAIRSGSREARQLA
                     LAGLKPPVRRLNI"
     gene            complement(4055..5305)
                     /locus_tag="VIC30_01645"
     CDS             complement(4055..5305)
                     /locus_tag="VIC30_01645"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7803133.1"
                     /translation="MPKKKSFRLQVKQLGPIREADITFGDLTVIVGPQATGKSILLQT
                     LKLLLDRDAIHRTFARHNVSFNGNAKAFVGGYFGKGMDSAWQEGKSALTFNGRDYALF
                     DLARPSKSRQVEEKLFFIPAQRVMSIANGVTQNFGQFNYGDPYTLRAFSDTVHDLLQN
                     EFGAKAEIFPQPNRLNDTLRRPITEHVFGASKLGVDARDFTKRLVLNVPRHTEGLPYT
                     AWSAGQREFTPLLLGLYWLCPGGGISRREQIEWVVVEEPEMGLHPQAIEATLLLVLEL
                     LKRGYRVVLSTHSPVVLDMVWALQQFKRLLASESDVRDLLGLNAAPYARELAQAALDK
                     DYRVYFFNRDDAAVDISQLDPGAVQVGESQWGGLLGFASRAGDAVANLVNRQSLAKHT
                     KRNIEKKPVQSLAQSPDNKSGDGR"
BASE COUNT         1328 a         1593 c         1330 g         1216 t
ORIGIN      
        1 gcaaaaaccc ggacgcaacg acccctgccc ctgcggcagc ggactgaaat ttaagaaatg
       61 ttgtttaacc gccgaatcaa ccacggcaac gacctctagc ggtcatggtg cgacacggat
      121 gcgccgtgcc gaaggcgatc tacaagagcc catgatcgag cacatgctgg cgtattacgg
      181 cgaaagctcg tttgctgaag cctgggacga gttttctggg tgggaagacg tccccatgga
      241 cgctgataag tacccggaac taaccaccgt gctcatgctg tggatcctgt acaactggat
      301 accagacaac acggacatcg atgaagataa atggctacct gaaatgcctg tggccgaaca
      361 ctacctgcac aacatgggtg acaagctcag cgaatttgac cgtcacttcc tcctgaacgt
      421 catgaatgac ccattcagtt actggcaagc caccaacgtc gtggccggcc agaccgtgac
      481 actacgcgat ctcttgcgcg accagacagt gacggtaatt gatcgtgtca tatcacagcg
      541 catagacacg ggtgcggtgg tgtacgcgcg tgtggtgagc atggccaatg agtcgatttt
      601 tatgggtctg gcaccgatcg cccttccccc ttactgcgca caagacctga tcagctaccg
      661 ccaacgcctt gcgcaggcgg gtcacccgga tttaaaggcc tcgcccgacg aggcaccggc
      721 actaaccact gacatattgt ttgaatacga atttgaattg cgctcctact actggcaagc
      781 gcgccaaatg gtgatgaacc cgacgccacc caccctacaa aacaccgatg gggaattgct
      841 cgcaccaacc aagctgatct atcgcttgtc ttgcacaccg accgaggcat ttgatgcgct
      901 cgctagctta tcgttgaaca aaaaatctga gctgctgcaa aacggcacct tcaacaagca
      961 gggtttactc gaatccatcg agttcccctg gcaaaaggct ggcaacaaac agaacaaagc
     1021 ctgggacaat acagtcttag gagaaatcat catccgtggg cagtcactgg tgattgaggt
     1081 caactctaaa gaaagagcca cgtcgatcaa gcggcgcatt gcccagcgtt tgaaagggca
     1141 agctgaatta ctcgacgaag aaatagagtt agtgcaggat atgctcgagc gcaaacacgc
     1201 cggcgatagt tcacacacag aacaaagttt gcaaccatcg caagcggaaa cagatgccct
     1261 gttggcgctt ccggaagttc aagagcaact cagacgcatg aaagatcaac actggcacga
     1321 ttggctcgac accgaactgc ctgcactcaa aggtcaaacg cctaggcaag ccagtaaaac
     1381 gccaatcggt cgcgagcggc tcgaggtgct gttgaccgac ttcgccggca agtgttcagg
     1441 tgatccaacc atggatcctg acatcggcag gctgcggcgt gaattgggac tgaactagtc
     1501 agccaatcgc tttaactcgt ttcttagccg ttggacctcc tcagtcagat ctgccaccaa
     1561 agcggccaac tgcgggtcgg catcgtagac ctgctcaaca tgaatgacct gctggatgcg
     1621 caccaccgtg gcgctggtga agtaataggt gtcgttgcgc aagatgggct gcaccacctc
     1681 ttgctcgatg cgctcaagca accactgttg attgacgcaa caaattcgtg cgacttcggc
     1741 gagttctagc atctgctcat cgagcaactc tgcctgggta tcagctgaag tccattggta
     1801 ttggctcatg gtgttgggcc tcccttctta acgttgccgg ggttcaaacc ccggataagc
     1861 gtcagccaat gcctgccacg cttttttctg ttcatcggtc acggcacctg gaatcgctat
     1921 tttgatttcc agcatcaaat cgcccgcagc tgctgtttta cccgcaggaa tgcctttgcc
     1981 ttttaaacgc agccgtcggc cagcaaccga accggctggc acattgacag ccaacgagcc
     2041 tgctggtgtc ttggccacca cctccgcgcc caaggctgct tcccacgggc tgacgtaaac
     2101 cggcatcgtg acatcacgcc cgctaaccga ccaaccctca ggcgcctcga tatgcacccg
     2161 cataaaaagg tcgccggcct taccaccacc aaaccccgga ccaccctggc cggctaagcg
     2221 aatcaattgc ccttcagtga caccagcagg aatattcaca tccagtgtgc gggtcttggt
     2281 gctcacctga ccctgggcat caacgtcata acctgacaaa cgcaaactgg tttgagtgcc
     2341 ggcataggcc tgctcaagtg tcagggtgat gtcggcatgt tggtcttggc cgtcccattg
     2401 cgccgggcct tggccgccgc gatatgcatc gtggcgtgag cgctcacgcg ccgtgcgacc
     2461 aaatatctct tcaaaaaatt cactgctatc tggtccaaaa ccgctgccct gatccgaata
     2521 ctgataacgt tgctcacgtc ccggcggcgg tctgacatca tcgacactgc gcgcgccttg
     2581 cgcccacgcc tcatggccaa tctgatcgta aacctcacgc ttggctgaat ctgacagcac
     2641 cgcattggct tcattgagtt ccgtcatgcg cgcagccgca tcagcctctt tgctgacatc
     2701 ggggtgatat tttctggcga gtcgccgaaa ggcttttttg atgtcctcgg cgcttgctgt
     2761 cttatctaca ccgagcgtgg cgtagtagtc aggcagtttc atgcaagatt ccttgggtca
     2821 accatggtta cattcattct agatcatcac gcagcagacc acgacaagcg cagcttttac
     2881 gggcactttc tcacagcggt gtctcacgcc atgcgacagt gacttccata agcttagggt
     2941 tgtacaaatt ccataaacgc cattcatgcc actcacccca cttaccccac ttaccccatt
     3001 cacaccataa ccatcagtac agcggccgct acgttcaaca caccatcacc aaaggaaaag
     3061 gtcatgcaca agtcactcat ctgtctcacc agcctattgc tcgctttgcc aatggcagcc
     3121 accgcgcagt catggcttaa tcttgactca agcgctttgg acgaaccagc gccgggctca
     3181 gcgacacagg cgatagctga catgtatttc aacgaatccg cgcaaaccac cagccttggc
     3241 tccggcccca ttcgtctggt gccttcttat gtccgcccaa cgccacttga cggggtgagt
     3301 ctgttctata acgctgatac cggcagctat ggacgaatca gtgacattgg ccatggccgt
     3361 acgttgatat tggataatgg gccggcttgg gtcaataccg aagacctcac cagcaagaac
     3421 aggaaccgag gtagcttgac cctagtcaat acacacccag acggtagtat gagttggcgc
     3481 gagattttaa agtgagaact cggcatcgcg ccgagcaaac tttagatatt taaacgtcgc
     3541 actggcggtt taagcccggc caatgccagt tgccgggcct ctcgacttcc agatcgaatc
     3601 gcgattgtcg aggtcgcaat ccaaacgaag ggctcatgcc cacaatgaat gctcgcagct
     3661 gtcagcagct taagacccgc aaactccggg gtctctagct ttgcctttaa ccaatctagc
     3721 ttagctagca tcaccttgac ttcacttggt gagcaacttg tatggggctc gacccacaga
     3781 gcggactctc taccagcacc gtgcaaaaga ccaatcccat aatcccagcg tgtggcacaa
     3841 ggttcttcct tgttaaagga tgcatcaaca tccacgctag ccgtaatccg tgcgaccgat
     3901 tttgaagccc gaccaattga agatcgatgt ttaccgtcta aggcacccag cccaggcgtg
     3961 ctgcttagac cggctgcact ggccgcacgc acaaactgtg ttctatctgc gggcactgtg
     4021 gtcgaagcgc gttttttgct caccctttgt tttttcaacg accgtccccg gacttattgt
     4081 ctggcgattg tgccagcgac tgcactggct ttttttcgat gtttcttttt gtgtgcttcg
     4141 ctagcgactg acggttaacc aaattggcca cggcatcgcc cgcacgactg gcaaatccta
     4201 acaagccacc ccactgagac tctccgacct gcacggcgcc tgggtcaagt tgcgagatat
     4261 cgaccgctgc atcatcgcga ttgaagaaat aaacgcgata gtccttatct agcgccgctt
     4321 gggccaactc gcgtgcatag ggtgcagcat ttaaccctag caggtctcga acatcacttt
     4381 ctgatgccaa gagccgctta aactgctgta acgcccagac catatctagc acaactggcg
     4441 aatgtgtcga caaaacgact cggtaacctc gttttaatag ctcaagaacc aacaacaaag
     4501 tcgcttcgat ggcttgcggg tgcaaaccca tctcaggctc ttcaacaacg acccattcaa
     4561 tttgctcacg gcgacttatc ccaccgcccg ggcatagcca gtaaagccca agtagcaaag
     4621 gcgtgaattc ccgctgacca gctgaccagg cagtgtaggg caagccctcc gtatgccggg
     4681 gcacattgag cacgagtcgc ttggtgaaat cgcgtgcgtc cacaccgagc ttgctagcac
     4741 caaatacatg ctcagtaatc ggacgccgca acgtatcgtt taatcgatta ggttgtggaa
     4801 agatttccgc tttggcacca aactcgttct gcaatagatc gtgaacagtg tcactaaaag
     4861 ctcttaacgt gtatgggtcc ccataattga attggccgaa attctgcgta acgccattag
     4921 cgatactcat gacacgctgc gccggtataa aaaacagttt ttcttcaact tggcgagact
     4981 tacttggtct ggctagatca aacagcgcgt aatctcgccc attgaaggtc agggccgatt
     5041 tgccctcttg ccaggcactg tccatacctt tgccgaagta cccgccgaca aacgccttgg
     5101 cgttgccgtt aaagctaacg ttgtgacgcg caaaggtgcg atgaatggca tcacggtcaa
     5161 gtaaaagctt gagcgtttgc aacaaaatac ttttgccggt tgcctgagga cccacaatca
     5221 cagtcaaatc accgaacgtg atgtccgcct cacggatagg gcctaactgt ttaacttgta
     5281 gtcggaacga tttttttttg ggcacggtcg atagctcgcg aagttgacac tttgctcagt
     5341 gagctgtggc ggcaagaata aaaatgcagc aacgtaatat tgatgaatat taccagccca
     5401 caccgcgccg agctcaatgc cgcacaggat ttacctcatt ggccatatct tcttcatcat
     5461 catactc
//
LOCUS       DATBNL010000098         3866 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21305, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000098 DATBNL010000000
VERSION     DATBNL010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21305"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VIC30_01650"
     CDS             <1..767
                     /locus_tag="VIC30_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803134.1"
                     /translation="VLLLVSVILLVVFLVDLVLFPAFRKAEVGASHGNGSPFGYILSS
                     AGLKAIIVLAVIVISALNAINDLIGPSLALLHDVGATGLSAFFGMLGAGLVIAMLSYT
                     VVGYRGNGRKLLLGGLATAAVGLLLISVPFVYGYYIGALVLGLGLGPLWAIVLSAVQR
                     TVPLTLRAGVIGLLGGAVLIAQPLASVTVGTLVDTVGPSMTIFGFALLVASATLIASQ
                     NKGLGILVDAKLHKKPMRQMMEEPQPSERGVEPSRL"
     gene            1087..2016
                     /locus_tag="VIC30_01655"
     CDS             1087..2016
                     /locus_tag="VIC30_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006758876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803135.1"
                     /translation="MSPIIEVQHLVKSYADGDRALDDVSLSIESGEVLALLGPNGAGK
                     TTLISIICGLTTITHGNVSVGGFDIVKEYRQARSLIGLVPQELMLEPFETVLATVSLS
                     RGLFGCKPDQSRVEAVLSQLSLLDKKHAQVRELSGGMKRRVLIAKALSHDPKVLFLDE
                     PTAGVDVELRRDMWRVIKELKRQGVTIVLTTHYIEEAEEIADRVAVINGGQILLVEEK
                     DKLMKRLGTKELRIELHEPVSALPESLVAFGVKPADDGMSLLYHYDVNAEKTGISSLM
                     SALVSEGIVLKDLQTYQSSLEEIFLDLVATENK"
     gene            2013..2774
                     /locus_tag="VIC30_01660"
     CDS             2013..2774
                     /locus_tag="VIC30_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014972952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7803136.1"
                     /translation="MNFHAIRAIYSFEMARTFRTKLQSLASPVISTALYFVVFGSAIG
                     GQITTIDGMPYGVFIVPGLIMLTVMMQSVVNASFGIYIPKFIGTIYEPLAAPISPWEM
                     VIGYVGAATTKSIMIGLIILGVSFLLVPVTIAHPFVMLIFLVLTAISFSLLGFILGLL
                     ARNFEQLNLVPMLIITPLVFLGGSFYSIDMLPPVWQTVTLFNPAVYLISGFKWAFFDT
                     ADVSIVASLLAISAFSALCFAVISWMFATGYRLKS"
     gene            complement(2810..2900)
                     /locus_tag="VIC30_01665"
     tRNA            complement(2810..2900)
                     /locus_tag="VIC30_01665"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2864..2866),aa:Ser,seq:cga)
     gene            3043..3822
                     /gene="yaaA"
                     /locus_tag="VIC30_01670"
     CDS             3043..3822
                     /gene="yaaA"
                     /locus_tag="VIC30_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009456706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEY7803137.1"
                     /translation="MLLLLSPAKKLDYDTPLGTKLHTDPLFVGEAKGLIDVLKKKSTS
                     DVAKMMSLSDSLAELNVQRYAHWSPKVTQQNARPAVLAFNGDVYEGLDAASLSESQLK
                     WAQDHVAILSGLYGVLRPLDLMQPYRLEMGTKLENPAGKNLYDYWKQTIAPYLNERLG
                     KDKQPVVVNLASEEYFKSVDLKALNARVIQCVFQDEKAGTYKIISFYAKRARGLMARY
                     VIENQINTPDKLTGFNLDGYAFAPEVSSADKLVFRRPEQIT"
BASE COUNT          879 a          888 c         1045 g         1054 t
ORIGIN      
        1 gcgttctgtt gctggttagc gtgatcctgt tggtggtgtt tttggttgac cttgtgctat
       61 ttcctgcatt tcgtaaggcc gaagttgggg cttcacacgg caacggcagt ccgtttggct
      121 acatattgag cagtgcaggt ctgaaagcaa tcattgtgct tgccgtgatt gttatttccg
      181 cgctcaatgc catcaacgat ctgatcggtc cgtccttggc gctgttacac gacgttggtg
      241 cgacaggtct gtctgcattc tttggtatgt tgggggcagg tcttgtgatc gcgatgctct
      301 catacactgt tgtgggttat cgcggtaacg gccgcaaact attgcttggt ggtttagcga
      361 ctgctgcagt ggggttgctg ctcattagcg tgccatttgt ttatggttat tacatcggcg
      421 cgctggtgct ggggttgggc ttaggtccac tttgggccat tgtgttaagt gcagttcaac
      481 gaaccgtacc tttaacgctg cgagctggag tcatcggctt gctaggcggt gccgtcttga
      541 tcgcacaacc acttgcctca gtgacagtgg gaaccttggt tgacacggtt ggtccttcga
      601 tgacgatttt tgggtttgcc ttgctagttg caagcgcaac cctgattgcc tcacaaaata
      661 aaggcttggg cattctggtg gatgccaagt tgcataaaaa gccaatgagg caaatgatgg
      721 aggaaccgca acctagtgaa cgcggtgtag agccgtcgag gctttgagac cagacattgg
      781 tttcgtggca cagaaggtgg tcaggtaccc atgccaattg ataggttaat gtacttcctt
      841 gcgtgagtcc ctttgtgcca tgcaaccaat gggactgtta acctatgcgc tgtttgttta
      901 gatcgatggt tctgtgacca aataacaaaa tagggcgtct gctcggaagg caacgagcta
      961 tccacaggac tcgtagctac tgacgtcccg gaccaataaa gcgtaagaac catcaatcgc
     1021 gtacacatct cacgaatcgc gcaagtctag cgacgtgatg aagtttaaag aactgaggat
     1081 agaaggatgt cacccatcat tgaagttcag cacctcgtca aaagctatgc tgatggtgat
     1141 agggcgcttg atgatgtatc gctttcaatt gaaagtggcg aagtgttggc cttgctcggg
     1201 cctaatggcg ccggtaagac aaccctgatt tctatcattt gcggattgac cacgattact
     1261 cacggtaacg tcagcgtggg cgggttcgat atcgtgaagg agtaccgtca ggcgcgctcg
     1321 cttattggtc ttgtgccaca ggaactgatg cttgagccgt tcgagaccgt gcttgccacg
     1381 gttagcttgt cacgcggtct gttcggttgt aaacccgatc agtctcgtgt tgaggccgtc
     1441 ttaagccagt tgtccctgtt agacaaaaaa cacgcacagg taagagaatt gtcaggcggc
     1501 atgaagcggc gggtgctgat tgcgaaggcg cttagccatg accccaaagt tttgttttta
     1561 gacgaaccga cagccggtgt tgatgtggaa ctgcgccgag acatgtggcg tgtgatcaaa
     1621 gaattaaagc gacagggggt aacgattgtt ctcaccacgc actacattga agaggcagag
     1681 gaaattgccg atagagtggc ggtgatcaac ggtggccaga tcctgctcgt ggaggaaaaa
     1741 gacaagctaa tgaagcgact cggcacaaaa gagcttcgga ttgagttaca cgagccggtc
     1801 agcgcactgc ctgaaagctt ggtggcgttt ggtgtgaagc ctgccgacga cggcatgagc
     1861 cttctttacc attacgatgt caacgcggaa aaaacaggca tctcctcgct tatgtcagcg
     1921 ttagtctctg agggtattgt gctcaaggat ttacaaactt atcaaagctc cttggaagag
     1981 atttttcttg atctagttgc cacggaaaac aaatgaattt tcacgcgata cgagccatat
     2041 acagcttcga gatggcacgc acattccgaa cgaagctaca gtcgttggct tcgcccgtta
     2101 tctcgacggc actgtatttc gtcgtcttcg gttcggccat tgggggccaa ataacaacga
     2161 ttgacgggat gccgtacggt gtctttattg ttccaggcct catcatgctg actgtgatga
     2221 tgcagtcggt ggtcaatgcc tctttcggta tttacatccc gaagtttatt ggcaccattt
     2281 atgagccgct ggctgcgccc atatcaccat gggaaatggt gattgggtat gttggcgccg
     2341 caacaacgaa atcaatcatg atcggtctga tcattctggg ggtttcgttt ttattggtgc
     2401 ctgtcactat tgcccatcct tttgtgatgc tgattttttt agtgctgact gccatatcgt
     2461 ttagcttgct cggatttatt ctggggttgc tagctcgtaa ctttgaacaa ctaaatcttg
     2521 tgccgatgtt aatcatcacc ccgctggtat ttctgggtgg aagtttttat tcgatcgaca
     2581 tgttgccacc tgtgtggcaa accgtgaccc tatttaatcc ggctgtttat ttgatttcag
     2641 gcttcaagtg ggcttttttt gatacggcag acgtgtccat cgtcgcctcg ctgttagcta
     2701 tcagcgcgtt tagcgcgctt tgctttgctg ttatttcgtg gatgttcgcg acggggtatc
     2761 ggcttaagag ctaggtacgg ttcattgaag agccatgaat tttgactggt ggcggagagg
     2821 gtgggattcg aacccacggt acggtttcac cgtacgcctg atttcgagtc aggtacattc
     2881 gaccactctg ccacctctcc gctcgaggtc ggtatcttag cagaaagcaa ccaacgtccg
     2941 ctcggcgctg cttagttgcc gcaagctaat tggcattatt tccacctatc gtcgcttagg
     3001 tttgttatct tctaggttgt ggtgattacg gagaaagacg gcatgttgct gctgctatcg
     3061 ccagctaaga agctggacta cgacacgcct ttgggtacca aactgcacac tgaccccttg
     3121 tttgtgggcg aggccaaggg attgatcgat gtgctcaaaa aaaagagcac ctctgatgtt
     3181 gcaaaaatga tgtcgcttag cgactcgtta gctgaactta atgtgcagcg ttatgcgcat
     3241 tggtcaccca aagttaccca acaaaatgcc cggcctgctg tgttggcttt taacggcgat
     3301 gtctatgagg gtttggacgc tgcatctttg tccgaatccc agctgaagtg ggcgcaggat
     3361 catgtcgcga tcttgagcgg cctatacggt gtgctgcgtc cgctggatct catgcaacct
     3421 taccgcctgg aaatgggcac taaacttgag aacccagcag ggaaaaacct ctacgattac
     3481 tggaagcaga ccattgcccc gtatttgaat gagcgactgg gtaaggacaa acagcccgtt
     3541 gtggttaact tggcctcaga agagtatttc aagtcagttg acctcaaagc cctaaacgca
     3601 cgcgttattc agtgtgtgtt ccaggatgaa aaagctggta cctacaagat catcagtttc
     3661 tacgccaaac gagccagagg cttgatggcc agatacgtga ttgagaacca aattaataca
     3721 cctgacaaat tgactggatt caatttagac gggtatgcct tcgcaccaga ggtgtcgtct
     3781 gccgacaaac tggtgtttcg tcgacctgaa caaataacgt aatggagagt acatggcatc
     3841 gccccaacta gacgtatcag catatc
//
LOCUS       DATBNL010000099         2057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_170621, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000099 DATBNL010000000
VERSION     DATBNL010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170621"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VIC30_01675"
     CDS             <1..189
                     /locus_tag="VIC30_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019654239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY7803138.1"
                     /translation="MTTVVQEPKGDPGNTLSRAEIEDKLKRLGTYQGAASADVLDALA
                     NRIWQLQTHAKVDQIMSA"
     gene            complement(245..982)
                     /gene="rph"
                     /locus_tag="VIC30_01680"
     CDS             complement(245..982)
                     /gene="rph"
                     /locus_tag="VIC30_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEY7803139.1"
                     /translation="MPETSSHTERAHQRPLDALRPVTFTRGYTRYAEGSVLIAMGETR
                     VLCTASVLDKVPPFLKGKGQGWVTAEYGMLPRSTHTRSDREAARGKQSGRTQEIQRLI
                     GRSLRAVVDLEKLGERSIHIDCDVLQADGGTRCASITGAWVALADAIDGLLASGALAE
                     NPLLDSVAAVSVGVVGGQARLDLDYEEDSGCDADVNVVMTGSGRFVEVQGTAEGHTFE
                     RRMLDNLLDLAEAGIGQLQGLAAQARS"
     gene            1238..>2057
                     /locus_tag="VIC30_01685"
     CDS             1238..>2057
                     /locus_tag="VIC30_01685"
                     /inference="COORDINATES: protein motif:HMM:NF015699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HEY7803140.1"
                     /translation="MIQSMTGFGSAQAAGDTGSVNIEIRSVNSRYLDLSFRMPDELRL
                     AEMPLRELVSQSISRGKVEVRASFTRAQKDLSTVISSSLLTQIERAHEQIKAVLPQVS
                     PPTFSDVLQWSDTDKTATDPALWVPLCQQAAAQALAQLIETRGREGARLVQVINEQAD
                     EAQGIISGLKDALPELLRAQSERIAKRMRDAFEQAAPQGLAHITASEISERLASEASL
                     FSLRADVAEELDRLVLHVAELKDTLQTGTDGENRAKPKHANKGVGKRLDFLFQEM"
BASE COUNT          507 a          575 c          539 g          436 t
ORIGIN      
        1 atgacaaccg tggtgcaaga acccaagggc gatccgggta ataccttgtc gcgcgctgag
       61 atcgaagaca aactaaaacg cctaggcacg taccaaggtg cagcatcggc ggatgtgctc
      121 gatgcattgg cgaatcgcat ctggcaactg caaactcacg caaaagtcga tcaaatcatg
      181 tctgcctaag tacatcaggg cacgctaact gcgtgccctg atctttagac agccctatcg
      241 ctttttaact acgcgcttgt gctgctagcc cttgtagttg gccgatacct gcttcggcta
      301 aatccagcaa attatcaagc atgcggcgct caaaggtgtg tccttctgct gtgccctgca
      361 cttcgacaaa ccggccactg ccagtcatga ccacgttcac atctgcatca caacccgaat
      421 cttcctcgta gtccagatcc aagcgcgcct gcccgccaac gacccccacg gacacagccg
      481 cgacactgtc tagcaaaggg ttctctgcca aggcgccgct cgcgagcaaa ccatcgatgg
      541 catcggccag tgcaacccaa gcacccgtga tgctggcaca ccgtgtgcca ccatcggctt
      601 gcaacacatc acaatcgata tgaatgctgc gctcaccgag tttttctaga tcgactacgg
      661 cacgcaggct gcgaccaatt aagcgttgaa tctcttgggt gcgacctgat tgcttgcccc
      721 gtgcggcttc acggtctgag cgggtgtggg ttgagcgcgg caacataccg tattcagcag
      781 ttacccagcc ctggcctttg cccttaagaa aaggcggcac tttgtccagc acactggcgg
      841 tgcacagcac acgggtctca cccatggcga ttaagaccga accctcagca tagcgtgtat
      901 atccacgcgt aaatgtcacg ggacgcaagg catctagagg tctttgatgg gcgcgttcgg
      961 tgtggctgga tgtctctggc atggatgttt ccttggttta gtgatttgtg tcgtctttct
     1021 ggggcaaagt atacgcagac aatctactgt gcttatttct gctgcactct cttgcgatgg
     1081 ccaagacagc agacagggtc aatatggtcg ctgcttgcag gcgtggcaga ttgtggcgtc
     1141 tacaatctgg tcctattaaa gacaaacgcg ccaagccaac gctaacagag ccaagcaaat
     1201 taaatcaaag caaatggtaa gccaaatgga caggcaaatg attcaaagca tgaccgggtt
     1261 cggtagcgcc caagccgccg gtgacacagg cagtgtcaat atcgagatac gaagcgtcaa
     1321 cagtcgttat ctggacctga gtttccgaat gccggatgag ttgcgcttgg cagaaatgcc
     1381 attgcgtgag ctcgttagtc aatccatctc tcgcggtaag gtcgaagttc gtgcgagttt
     1441 tacccgcgca caaaaggacc tgagcacagt catttcatca tcactgttaa cgcagatcga
     1501 acgcgcacac gagcaaatca aagcagtctt gccacaggtc tcgccaccga cgttttctga
     1561 tgttttgcag tggagtgata ccgacaaaac cgccaccgac cctgccctat gggtgccgct
     1621 ttgccagcaa gccgccgcgc aagcgctggc gcagttaata gagacacggg ggcgtgaagg
     1681 cgctcgcttg gtacaagtca tcaacgagca agctgatgag gcacaaggca ttatcagcgg
     1741 tctcaaagac gcgcttccgg aactacttcg tgcgcagtct gaacggattg ccaaacgcat
     1801 gcgcgatgcc tttgaacaag cggcaccaca aggattggcg cacatcacgg ccagtgaaat
     1861 ttctgaacgc ttagcctccg aagcaagcct gttttcgttg agagctgatg tagcagaaga
     1921 gctcgatcgc ttggtgctgc acgtggctga attgaaagac accctgcaaa caggcacgga
     1981 tggcgaaaac cgcgccaagc ccaaacacgc caacaaaggc gtgggcaagc gactcgattt
     2041 tctgtttcag gaaatga
//
LOCUS       DATBNL010000100         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21330, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000100 DATBNL010000000
VERSION     DATBNL010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21330"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..933
                     /locus_tag="VIC30_01690"
     CDS             52..933
                     /locus_tag="VIC30_01690"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEY7803141.1"
                     /translation="MTYSNPLRQMARWFAAPQQDTLRWGLALSLLIHALVLLWKPELL
                     SPLGPPSAPMNVVLVNTFTEQAPLAATVVAQDNLDGGGQTEQPRIAANPLPRVGSEDK
                     DLSLLELTRQRQQLERQQEQLLKTLTGIWQARPNQMQSDNDEPSPIAGPDEVDQRSLE
                     QNARIAALLDRVERYNQRPRKFYDAPSATASPFAGYVDGWRQRIEQTGSEHYPDGAPR
                     GDLQATITIAANGSVIDISLDRPSDDPRLNQAVRRIIELAQPFAPFPDQLSSRIDQLV
                     ITRTWQFTPGRLTTLTP"
     gene            930..>1661
                     /gene="aroE"
                     /locus_tag="VIC30_01695"
     CDS             930..>1661
                     /gene="aroE"
                     /locus_tag="VIC30_01695"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF001310.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEY7803142.1"
                     /translation="MTTPLSFAVIGHPVAHSRSPEIHAAFAEQFGINLTYERIDAKPE
                     AFEVRAQQFFNQGGAGLNVTVPFKERAWQLAQAHLSPRARDAGAVNTLWITNDCIHGC
                     NTDGVGLVTDLRRLNMPLESARIIILGAGGAARGVLGPLLAAGAAHITVLNRTAQRAH
                     ELIDAWVLTHLNDRSKLLSGGFEGDTAWPTPDLVINATSSSLQGQALALPAALWASNA
                     CAYDMMYSAQPTTFMQQAQEAGSRQL"
BASE COUNT          380 a          526 c          433 g          322 t
ORIGIN      
        1 taagcgccca agccagtttc attagtcaga ccgaggtcta attggtttgc gatgacctat
       61 tcgaatccgc tcagacagat ggcccgatgg tttgccgccc cccaacaaga caccttgcgt
      121 tgggggctgg cactgtcttt gctgattcat gcgctggttc tgctctggaa gcctgaactc
      181 cttagcccgt tgggtccgcc atcggcaccg atgaatgtgg tgctcgtgaa cacattcact
      241 gaacaagcac ctctggctgc cactgttgtg gcacaagaca accttgacgg tggtggccag
      301 accgagcaac cccgcatcgc cgccaatcca ctgcctcggg tgggtagcga agataaagac
      361 ctctccttgt tggaattgac gcgtcaacgc caacaactcg aacgtcaaca ggaacagtta
      421 ctcaaaacgc tgactggcat ttggcaagca cgacccaatc agatgcaaag tgacaacgat
      481 gaaccatctc cgatcgctgg gcccgacgag gttgatcagc gatcattaga acaaaacgcc
      541 cgcatcgcag cgttgcttga tcgcgttgaa cgctacaacc agcgcccgcg caagttttat
      601 gatgccccat cggccacggc cagccctttt gcgggctacg ttgacggctg gcgccaacgc
      661 atcgagcaaa ccggcagtga acactacccc gatggcgcac cgcgcggcga ccttcaggcc
      721 actataacca tcgctgccaa tggcagcgtc atcgacatct cactggaccg tccatcagac
      781 gatccgcgcc tgaatcaggc ggtcagacgc atcatagaac tggcccagcc ctttgcccca
      841 tttcctgatc aactgtcatc ccgcattgac cagttggtta ttacccgtac ctggcaattc
      901 accccaggca gactgaccac actgacacca tgaccacacc tttgtcattt gccgttatcg
      961 gccacccggt ggcgcacagc cgctcgcctg agatacatgc ggcatttgcc gaacaattcg
     1021 gaatcaatct gacctacgag cgcatagacg ctaaaccaga ggccttcgag gtccgcgccc
     1081 aacaattctt caaccagggt ggcgcgggct taaatgtcac ggtgcccttc aaagagcgtg
     1141 cttggcagtt agcccaggct cacttgagcc cgcgcgcgcg cgatgccggg gccgtgaaca
     1201 cattgtggat caccaacgac tgcattcatg gttgcaacac cgacggcgtg ggtctagtga
     1261 ccgacttaag gcgtctgaac atgccgctag agagcgcacg aataatcatt ctcggcgctg
     1321 gtggcgccgc gcgtggggta cttggcccac tgctggccgc cggcgcggca cacatcacgg
     1381 tgctcaaccg caccgcacag cgcgcacacg aactaatcga tgcatgggtg ctgacacacc
     1441 tgaatgacag atctaaatta ctgtcaggcg gctttgaagg tgacaccgcc tggcccacac
     1501 ccgatctggt catcaatgcc acctcgagca gtctgcaagg tcaggcattg gcgctgccag
     1561 cagcgctttg ggcgtcaaac gcctgtgcct atgacatgat gtatagcgca caaccgacca
     1621 cattcatgca acaagcacaa gaggccggca gccggcagct c
//
LOCUS       DATBNL010000101         1836 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_170656, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000101 DATBNL010000000
VERSION     DATBNL010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170656"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1836)
                     /locus_tag="VIC30_01700"
     CDS             complement(<1..>1836)
                     /locus_tag="VIC30_01700"
                     /inference="COORDINATES: protein motif:HMM:NF024215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FUSC family membrane protein"
                     /protein_id="HEY7803143.1"
                     /translation="SLTGVASSHPVWLLVAVVGQTFFFSMLAVYGKRGGIIGLACLIL
                     TVVTMHSSLTPDQVLEHALVTLGGAAIYITFSSFASRPLQVREEEQSLAVALLSTADY
                     VAARAEMYDADVDIDEHYRQLISKQSTMSDQHQAARDMILRRMSRASVEKSPRRRMVW
                     NVFIDMINMLDMLVGTHTDYTLLQRSLGQTDTLLFMRDALLKMSLELERIALAVTQEK
                     RLMRRNSVKAELRALEYDIEVMKRQGFATENPEAYSLCVQILRRLRNVNRCIERMLAQ
                     TQLPSDATALRPAQLDTSLTDFLSRQSFNPKLLTTNLRFDSPPFRFSLRVSLAVAVGL
                     AIGLAIPQIGPHAYWIVLTIVIIMKPGFALTRQRNTARLIGTLLGCGLAFLLFYITTN
                     DQVLLTTLVVSLIAGFSFILVNYLIASVFNTVTVLIMLHFLLPDTFGLVGERALDTTI
                     GSLVALAFSYVLPWWEARSLPSLADAAIRANERYLRAGLEYIQPSNGVTQKSSVNDWP
                     LARRDTLVAFSNFAEAFYRMMGEPPNRQAHVAEYNNLLIQNHVLATEIATTIQQLQAQ
                     PELPEPAIAFLKEMDMALVNRDLQRASQDLTIDLLAYPGADWIYP"
BASE COUNT          456 a          461 c          514 g          405 t
ORIGIN      
        1 attggataaa tccagtctgc gcctggatag gccaataaat cgatggtgag gtcttggctc
       61 gcacgctgca ggtcacggtt gactagtgcc atgtccattt cctttagaaa tgctatcgca
      121 ggttcaggca gttcgggttg agcttgaagt tgctgaatag tggtggcgat ttctgtggca
      181 agcacatggt tctgaataag caggttgttg tattcagcga cgtgcgcctg tcgattcgga
      241 ggttcgccca tcatccgata aaaagcctcc gcgaagttac taaaagcgac cagcgtgtcg
      301 cgtcgagcca gtggccaatc attgacagaa gatttttgtg taaccccgtt agacggctga
      361 atatattcaa gccctgcccg cagatagcgc tcattagcgc gaatcgccgc atctgccaag
      421 gaaggtagtg aacgcgcttc ccaccatggc agtacatagc taaaagccag tgccaccaac
      481 gaaccgatgg ttgtatctaa ggcccgttca ccgacgagac caaacgtgtc aggtaggaga
      541 aagtgcagca tgattagtac ggtaactgta ttaaagacgg aggcgatcag atagttcacc
      601 agtatgaaac tgaagccagc gatcagcgac accaccagtg ttgtcagcag cacctgatcg
      661 ttagtagtga tgtagaaaag caaaaaagct aacccacagc ccaacagcgt gccgatcagt
      721 cgtgcggtat tgcgctgacg tgtgagcgca aacccgggtt tcatgatgat gacgattgtc
      781 agcacgatcc agtaagcgtg tggaccgatc tggggaatgg caaggccaat agccagtcct
      841 acggctaccg ccaagctcac ccttaacgag aaccggaaag gcggggagtc aaaacgaagg
      901 ttggtggtga gcagttttgg attaaacgat tgccgtgaca aaaagtctgt caacgatgtg
      961 tcgagttgag ccggacgcaa cgccgtggca tcgctaggta gttgtgtctg cgccagcatt
     1021 cgttcaatgc aacgattcac attgcgtagc cggcgcaaaa tttgaacgca cagtgagtag
     1081 gcctctgggt tttctgtcgc aaatccttgt cgtttcatga cctcgatgtc gtactccagt
     1141 gcgcgcaatt cagccttgac gctgttgcga cgcatcaagc gcttttcttg ggtgacggct
     1201 aaggcaatac gctcaagctc gagtgacatt tttaagagcg cgtcgcgcat gaacaaaagc
     1261 gtatcggttt ggccaagcga gcgctgaagc aatgtgtagt cggtgtgcgt gccaacaagc
     1321 atgtccagca tgttgatcat gtcgataaac acattccaga ccatacgccg gcgtggcgat
     1381 ttctcgacgc tcgcgcggct catgcgtcgc aagatcatgt cacgcgcggc ctggtgctgg
     1441 tcactcatgg tggattgttt agagatgagc tggcgataat gctcatcgat atcgacgtca
     1501 gcgtcgtaca tttcggcacg cgcggcaaca tagtcggctg tcgacaggag tgcaacggcc
     1561 aggctttgct cttcctcgcg tacctgcagc ggccggctcg caaacgagct aaaggtgatg
     1621 tagatggccg cgccaccgag ggtaaccaag gcgtgttcaa gtacttggtc tggtgtgagt
     1681 gacgagtgca tcgtcaccac cgtcaatatc agacaggcca atccgatgat gccaccacgt
     1741 ttgccataaa ccgccagcat ggagaagaaa aaagtctgtc ctaccaccgc aactagcagc
     1801 cagacggggt gactcgaagc gactccagtc aggcta
//
LOCUS       DATBNL010000102         5620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_190271, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000102 DATBNL010000000
VERSION     DATBNL010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5620
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190271"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1715
                     /locus_tag="VIC30_01705"
     CDS             144..1715
                     /locus_tag="VIC30_01705"
                     /inference="COORDINATES: protein motif:HMM:TIGR03505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark protein"
                     /protein_id="HEY7803144.1"
                     /translation="MKNKTKNVVTTLAMRFVFACLIAAAGFMLAPHALAFEVGHSRVV
                     SAPGQPLTVVVPIKNLNAGDAASLAVRLASPDQWQAAGLTPPVALGTLSLNVQAGADE
                     SSRLINVRSPEVSEQTVIDVLLDVSTSAANRTVQTSIIVPPPPRVRLAAETITVQRGD
                     TLIGIAEQFPVQGADLYQQLWALFSTNPDAFMRENMNLLKAGASLSVPDADAVRAVDP
                     AFAKAQYLAQVRAFRQGSGGGQGDVGIAADASTQTLQNQSDEGQPKTVEAAAQEPDAP
                     ISDEVRLTPAEGDSVSAQADALVSGQRQLAEQSDRQAALEQNIDDLKNTIAESVKAQR
                     ANTAQAGNAQAGNEQSVTAAITSNDRPLSAAGNSGASASAQDALAPEDSQNTAADSAP
                     GGEQNALKADSPNTNDSNTNASNNTDSNASDSNASADPQVGAAIDTNQNIFTRASHWV
                     ADNTTAAIALLLALIALILAWALRASKNKSGQVAAAQDRVERTSASFEEKLKDIDLSL
                     DDKPQEAPGKPDGKV"
     gene            1721..2521
                     /gene="truA"
                     /locus_tag="VIC30_01710"
     CDS             1721..2521
                     /gene="truA"
                     /locus_tag="VIC30_01710"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEY7803145.1"
                     /translation="MGRVALGVSYDGRGWSGWQTQPGGQTVQDQLEAAIASFVGVPVN
                     TICAGRTDAGVHALGQVVHLDSPVSRPESAWVRGLNSALPDSIAVQWAVPVSDAFHAR
                     FSATTRSYTYVICNTPVRQPLWAGRAGWCFRPLDAHIMQAGADLFVGEHDFSSFRSSQ
                     CQAASPVRTMHSLVVERRVHLILVHLKANAFLHHMVRNIVGELVLLGQGKTDLEHIKR
                     ILQARDRTLAAPTFSASGLYLTQVTYPANVLPNPPADSGTSMHNLELF"
     gene            2521..3210
                     /locus_tag="VIC30_01715"
     CDS             2521..3210
                     /locus_tag="VIC30_01715"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006394025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEY7803146.1"
                     /translation="MQASNAIVLPERTRIKICGLTREQDVKSACASGADALGFVFYPK
                     SRRYVTPEQAGALAREAGIFVSTVALFVEPAVDLVESVIRNVHPSYLQFHGDETPAFC
                     GQFNWPYVKAFRVGAPGLDSPENLLAACHAHMDARAWLFDSYTPAYGGSGHAFDHALL
                     ADVLAERARPVILSGGLNETNVRELSGRLAPEAVDVSTGVELEPGLKSSEKIAAFVAQ
                     VTAADLDRANT"
     gene            3338..3414
                     /locus_tag="VIC30_01720"
     tRNA            3338..3414
                     /locus_tag="VIC30_01720"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3372..3374,aa:Val,seq:gac)
     gene            3681..4475
                     /locus_tag="VIC30_01725"
     CDS             3681..4475
                     /locus_tag="VIC30_01725"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803147.1"
                     /translation="MEIKNSVALITGAASGIGEATAKHLASLGARVALIDRDLTQIER
                     VRDEIDPTGARAVAIAGDVTVEEDSARFVSQTLEAFGQLNIAVSCAGVIRDGTLLNID
                     KNTGQVSRKLGFDKWKTVIDVNLTGTFLTLRDCAEAMANGGWDGLLVPISSVNKIGQV
                     GQINYSATKAAIERFPKIIVGEFLLRKIRNIRCVGIAPGYTETKILQDMNQDALEAIL
                     KDVHLGRLIKPTEIADMIAYCAQNEALNATTVEITGGLCFPGNIAK"
     gene            complement(4611..4832)
                     /locus_tag="VIC30_01730"
     CDS             complement(4611..4832)
                     /locus_tag="VIC30_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEY7803148.1"
                     /translation="MFPEYRDLITRLKTSDHHFTRLFDKHNELDQEIKNLEERIPPGS
                     HEEIENLKKEKLALKDQLYDILQKHDQQG"
     gene            complement(4929..>5620)
                     /locus_tag="VIC30_01735"
     CDS             complement(4929..>5620)
                     /locus_tag="VIC30_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020067755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY7803149.1"
                     /translation="QHLLQQTSEWSGSCFDIPDQVDHYRTLAFAPAAAGKKGSKRPLS
                     APGTFWEYNDVRINQLSLALLHLFQRPLPAVFKTEIADPCGLTDQWRWVGYDHAWVQI
                     NGQRMPSVPGGSHWGGGVSISATDQYKLTQMLLQDGAVNGKQVLSKQWLTQMRTPCPL
                     APFYGYLVWLNDNQRIFKSLSTQAYFGMGAGGHFSVVDPSRQLVVIVRWLEASQADEF
                     LRRVADATDQT"
BASE COUNT         1264 a         1392 c         1558 g         1406 t
ORIGIN      
        1 gtctttagca aataaagcag tacattgcct taaatagcgt gttggatata aacacatggc
       61 gacaattaaa ctcatgcctt tatctaacaa ttcgcaattt gtttgcatcg tacgtgctcg
      121 tacagactta agctttggct actatgaaaa ataaaacgaa aaatgttgtg acgacgttgg
      181 cgatgcgctt tgtgttcgct tgtttaatcg cggctgccgg ttttatgctc gcgccacatg
      241 cgctggcatt tgaggttggt cacagtcgcg tcgtttccgc gccaggtcag cctttgactg
      301 tcgttgtacc aatcaagaat ttaaatgcag gcgatgccgc ctcactggcg gtcaggctag
      361 ctagccctga tcaatggcag gctgcgggct tgaccccgcc ggtggcgcta ggcacgctat
      421 cgcttaacgt gcaagcaggt gcagatgaga gcagtcggtt aatcaatgtt cgctcgcctg
      481 aagtcagtga acaaacggtg atcgatgtgt tgcttgacgt gtcaacgtca gccgccaatc
      541 gcactgttca gaccagcatc attgtgccgc caccgccgag agttcgattg gcagccgaga
      601 cgattacggt gcaacgcggt gacacactca ttggtatcgc tgaacagttt cccgtccagg
      661 gcgctgatct ttaccaacag ctctgggcgc tttttagtac taatccagat gcgttcatgc
      721 gtgagaacat gaacttgctc aaagcaggtg cttcgttgag tgtgccggac gccgatgctg
      781 ttcgagcagt tgatcctgct tttgccaagg cacaatactt ggctcaggtc agggcgttcc
      841 ggcaaggctc aggcggtggt caaggcgatg tcggtattgc cgctgacgca tcaacgcaaa
      901 cattgcaaaa tcaatcggat gagggtcagc ccaagacggt cgaagcggct gcacaagagc
      961 ctgatgcacc gattagcgac gaggtgcgtc tgacgccagc tgagggcgat agtgtttcag
     1021 ctcaggctga tgctctggtc tcgggccagc ggcaattggc cgagcaaagc gatagacaag
     1081 cggctttaga gcaaaacatt gatgacttga aaaataccat cgctgaaagt gtcaaagccc
     1141 aacgcgctaa cactgcacaa gcaggcaacg cacaagcagg caacgaacaa tccgtcacag
     1201 cggcgattac tagcaatgat cgaccattga gtgccgccgg taacagtggt gcttccgcca
     1261 gtgcgcaaga cgcattagca ccagaagatt cccaaaacac cgcggctgat agtgctcccg
     1321 gcggtgagca aaatgcgtta aaggcggatt ctcctaatac caacgattcc aataccaacg
     1381 cttccaataa taccgattcc aatgctagcg attccaatgc cagtgctgat cctcaggtag
     1441 gtgctgcgat cgataccaat caaaacatat ttacaagagc aagccattgg gtcgctgaca
     1501 atacgaccgc ggctattgcg ttgttgctag cattgatcgc cttgatcttg gcttgggcgc
     1561 tacgtgctag taaaaacaag tccggtcagg tggctgcagc tcaagacagg gttgagcgga
     1621 catctgccag ctttgaagaa aagctaaaag atattgactt gtcgctagac gacaagcctc
     1681 aagaggctcc tggtaagcct gacggcaagg tctaggattc atgggccgtg tggcgctggg
     1741 ggttagctat gacgggcgtg gttggtcagg gtggcagaca caaccgggtg ggcaaacggt
     1801 ccaagatcag ctagaagccg cgattgcatc atttgttggg gtaccggtta acaccatttg
     1861 cgctggtcga accgacgcgg gtgttcatgc gctggggcaa gtagtgcatc ttgattcgcc
     1921 cgttagccgt ccagaatccg catgggtgag ggggttaaat agtgccttgc ctgattcgat
     1981 cgctgtgcag tgggcggtgc cggtgtctga cgcctttcac gcccggttta gcgcaaccac
     2041 tcgatcatat acatacgtta tctgcaatac gcctgtgcgt cagccgctat gggcaggcag
     2101 agctggttgg tgctttcggc cattggatgc gcacatcatg caggcgggtg ccgatttatt
     2161 tgtcggcgag catgatttct cgagtttccg gtcttcccaa tgccaagcag ccagcccggt
     2221 ccgaaccatg catagcctgg ttgttgagcg acgtgtgcat ttgatcctcg tgcacttgaa
     2281 agcgaacgcc tttttgcatc acatggtgcg caatatcgtg ggtgagcttg tgttgcttgg
     2341 gcagggcaag accgatctcg aacacatcaa acgtatcttg caagcccgtg atcgtacctt
     2401 ggcagcgccc acctttagcg ctagtggtct atatttgact caggtaacct atccggcgaa
     2461 tgtcttacca aatccaccag ccgactcagg tacatccatg cataacttgg agctttttta
     2521 atgcaggcat cgaacgcgat tgttttgccc gagcgcacac gcatcaaaat ttgcggtctg
     2581 acgcgcgagc aagatgttaa gtctgcgtgc gcgagcggtg ccgatgcgct tggattcgtt
     2641 ttttatccca agagtcgccg ctacgtcaca ccagagcaag caggcgcctt ggcgcgtgaa
     2701 gctggcatat ttgtttcaac agtggccttg tttgttgagc cagctgttga tctcgttgag
     2761 tcggtgattc gaaacgtgca cccgtcttat ctgcagtttc atggcgatga aacgccagcg
     2821 ttttgtggtc aatttaattg gccctatgtc aaagcctttc gagtcggtgc gcccggacta
     2881 gatagcccgg aaaacctact tgcagcttgt cacgcacaca tggatgcccg tgcttggtta
     2941 tttgatagtt acaccccagc atacggcggc agtggacacg cctttgacca tgccttgtta
     3001 gccgatgtgc tggccgagcg ggcgaggccg gttattttgt ctggcgggct taatgaaacc
     3061 aacgtgcgtg agttatcagg acgtctagcg ccagaggccg ttgatgtcag cacgggcgtt
     3121 gagcttgagc ccggtttgaa gtcgtcagaa aaaattgctg cctttgtggc gcaagtgaca
     3181 gccgccgatc tagatcgggc caatacttga gccctaggga gttttttgtg tgatcgtcgt
     3241 tcttgccctg atcgtgatct gatcttgcct ttatcttgtg ttttgtcttt ttgacaggca
     3301 cacgcggtca gggtatgatt gcggtctttc gtattctagg cggttagctc agttggttag
     3361 agcgccacgt tgacatcgtg gaggtcgttg gttcgaatcc aataccgcct accagaatat
     3421 ctaaagcaca gcaaaatcac agcgatagcg cgagcgactt atatacagtt gctctttttt
     3481 ttttggctct tccgtttgat tctttgcttt ttgcattgtt tttggtgcct acttgtgcct
     3541 acctgtttga tgtagcgcag ttcgcgccga gccttctcaa gtccctaacc tgatacactt
     3601 tttgcgcatc gcagcagcat tgagccattg actgcgaagt gtaataacaa tcaacatgtc
     3661 agaaaaaggc tggacgatta atggaaatta aaaacagtgt ggcactcatc acgggagcgg
     3721 ctagcggcat cggtgaggcg actgcgaaac atttggccag tctgggcgcc cgcgttgcgc
     3781 tgattgaccg tgatttgacg caaatcgaga gggtgcgcga tgagatcgat cctacaggtg
     3841 cgcgcgccgt tgcgattgcc ggtgatgtga ctgtggaaga ggattcggct cgctttgtta
     3901 gccaaacgct tgaggctttc ggccagttaa acatcgctgt gagctgtgct ggggtgattc
     3961 gcgatggcac gttgctcaat atcgataaaa acaccggcca ggtttccaga aaactcggct
     4021 ttgataagtg gaaaaccgtc attgatgtca atctgaccgg cacattctta acccttcgcg
     4081 attgcgcgga ggcgatggcc aatggcggct gggatggttt gctggtgccg atatcctcag
     4141 tgaacaagat tggtcaggtc gggcaaatca attactcggc aaccaaagcg gccatcgagc
     4201 ggtttcccaa gatcatcgtg ggcgagttct tgctgcgtaa gattcgcaac atccgctgtg
     4261 ttgggattgc gccgggctac accgagacca aaatcctgca ggacatgaac caagacgcac
     4321 tcgaggcgat cttaaaggat gtccacttgg gtaggctgat caaaccaacc gaaattgcgg
     4381 acatgattgc gtactgtgcg caaaacgagg cgcttaacgc cacgaccgtc gaaatcacag
     4441 gcggcttgtg tttccccggc aatattgcca agtagtaggg caattagggc gagcagaact
     4501 gaagggcaca tacacaaacg ccgagcatga ggctcggcgt ttgtacattc tgcagcttgg
     4561 tctcagaagc ttagacgcac tatttgggaa atggtgcgac gatcgagtcc ttaaccttgc
     4621 tggtcgtgtt tttgcaggat gtcgtagagc tggtctttca aggccagctt ttcttttttc
     4681 aggttctcaa tctcttcatg agacccggga ggaattctct cttcgaggtt tttgatttcc
     4741 tggtctagct cattgtgctt gtcaaacaag cgcgtgaagt gatggtcgct ggttttcagg
     4801 cgagtaataa ggtcacggta ctctggaaac atgctttctc cgttggtcgt taagtttgat
     4861 tcaggttcga tttcgtgtcg ataaggaccg agtctgcttg tgcacactgc ttcgtgacat
     4921 attacccgct atgtctggtc agtagcatcg gcgacgcgtc gtagaaattc gtcggcttga
     4981 cttgcctcaa gccatctcac gataacaacg agttgccggc tgggatctac cacgctgaaa
     5041 tggccacctg cacccatgcc gaaataggcc tgagttgata acgacttgaa tatgcgttga
     5101 ttgtcattga gccagaccaa atagccgtaa aacggggcta gggggcaggg cgttcgcatt
     5161 tgagttagcc attgcttgga taggacttgc ttgccattga cggcaccgtc ctgcaacagc
     5221 atctgggtca gtttgtattg atcggtggcg ctaatggata cgccaccacc ccagtgtgag
     5281 ccgcctggca ccgatggcat gcgctgccca ttgatttgaa cccaggcgtg gtcatagccg
     5341 acccaacgcc attgatcagt tagcccgcag ggatcagcaa tctcagtttt aaaaaccgct
     5401 ggcagcggtc tttgaaacag atgcagcaaa gccagcgata gctggttgat gcgcacatcg
     5461 ttgtattccc agaaagtgcc gggagcgctc agtgggcgtt tactgccttt tttgccggcg
     5521 gctgccggcg cgaaggctag cgtacggtag tgatccactt gatccgggat atcgaagcag
     5581 ctaccactcc actcgctggt ttgttgcaac agatgttgca
//
LOCUS       DATBNL010000103         2084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_160799, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000103 DATBNL010000000
VERSION     DATBNL010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160799"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VIC30_01740"
     CDS             complement(<1..490)
                     /locus_tag="VIC30_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014973376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal helicase domain-containing protein"
                     /protein_id="HEY7803150.1"
                     /translation="MVHHVDRRCKSSVNRQQRSDLLCPHNTAKQSYGQICAWAMTAGC
                     PAQRQTGALDGTARVADRRSFLISLKAGGVGLNLTAADTVILYDPWWNPAIERQAMDR
                     AHRIGQDKPVFVHRLIAEGTVETRIAEMQARKQALMDSVFDPEATGTMDMSEEEILSL
                     FAP"
     gene            379..879
                     /locus_tag="VIC30_01745"
     CDS             379..879
                     /locus_tag="VIC30_01745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803151.1"
                     /translation="MRKSVRKTVLLCCEGKADQTFVAYLRSTYTVGRRGAPYVSAKQA
                     GGKGSNNVIATLIGELRCSKPDRVVDLLDADCLPTSAKRREANRNGIEFITLEPCLEG
                     FSLKVLGQTVPQSSQACKYRLKRIDRREPFEAGFYADNFPKALLDAARRSVAELDSLL
                     SLFHVD"
     gene            complement(1284..>2084)
                     /locus_tag="VIC30_01750"
     CDS             complement(1284..>2084)
                     /locus_tag="VIC30_01750"
                     /inference="COORDINATES: protein motif:HMM:NF025124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803152.1"
                     /translation="RGLASAQDERILNERRRHHDRPFDVQPVRSANLDALSRLRFEQE
                     YLPALVAPDVLAANGRSYEQQLAATKMILGDDLPTPTTLGLLIIGKSPADWLPGAYTQ
                     FLRIGGNDLASAVLDEESIYGTVTDQIRRLEEKLSAHNLRAVNFKDVELEQRRELYPM
                     DALRQLVRNAFMHRSFECTNTPVRVYWFDDRIEIHNPGGPFGSVTVENFGDPGITDYR
                     NPNLAEALRALGYVQRFGAGIAIARNALKDRLSFKVGAGTVTAVISSA"
BASE COUNT          428 a          552 c          605 g          499 t
ORIGIN      
        1 tcggcgcaaa cagtgacagg atttcttcct cgctcatgtc catggtaccg gtggcctcgg
       61 ggtcaaacac cgaatccatc aaggcctgct tgcgtgcctg catttcggca atgcgggtct
      121 cgaccgtgcc ctcggcaatc aggcggtgca caaacaccgg cttgtcttgg ccaatgcggt
      181 gtgcccgatc catggcctga cgttcaatgg ccgggttcca ccatgggtcg tagaggatca
      241 cggtgtcagc ggcggtgagg tttagcccca cgccaccggc tttgagactg atcagaaaac
      301 ttcggcgatc agcgactcga gcagttccat caagcgcgcc cgtttggcgc tgtgccggac
      361 atccagcagt catagcccat gcgcaaatct gtccgtaaga ctgttttgct gtgttgtgag
      421 ggcaaagcag atcagacctt tgttgcctat ttacgctcga cttacaccgt cggtcgacgt
      481 ggtgcaccat acgtgtcagc aaagcaggcg ggtggcaaag gtagtaacaa tgtgattgcg
      541 acgctgattg gcgaattgcg ctgctcgaaa cccgatcgag tagtcgattt gctcgatgct
      601 gattgtctac ctacgtcggc taaacgacgt gaggccaatc gaaacggaat agagttcatc
      661 accttagagc cgtgccttga gggattttca ctaaaagttt tggggcagac ggttccgcag
      721 tcgagtcagg cttgcaaata tcgcctcaaa cgcatcgatc gtcgcgaacc gtttgaggca
      781 ggtttttatg ctgacaattt cccgaaagcg cttttagatg ctgcgcgacg ctctgttgct
      841 gaactcgact ccttgctgtc gctatttcat gtggattgat cggcatgggg gtggcagtta
      901 gtcgcgcccc tgccacacca cctgacgtac gtgtccacac taggcggttc aagaacttga
      961 ggtcacgtga atcggggtac gccagggtcg tggaagtatt tgatggcagg cgcacaactc
     1021 aattttgcgc ggtaggcacc ggatctgaat tcgagtcgat cggtccatcc aagggcccta
     1081 taggcgcagc aagctgccgg gcagcctcag caggcttgct gcccctggat tgtccacgcg
     1141 ctgggattgg tgggtgcggt ggttggtggg gtggtcggtg cggtggtcgg tggctgcttt
     1201 ttcaagggtt tctctttgac caggggtgtg atggatagtg tcgctcttat gccatgcgcc
     1261 gctcaaggtt agtctacggc tttttatgcc gaactgataa ccgctgtgac tgtaccagcg
     1321 cccaccttaa agctgagtcg atctttcagc gcattgcgag caatggcaat gccagcgcca
     1381 aagcgctgga cataacccaa ggctcgcagt gcctcggcca ggttcgggtt tcgatagtcc
     1441 gttatgccag gatcgccgaa gttttcaacg gtgacgctac cgaaggggcc tccggggtta
     1501 tggatttcga tccggtcatc aaaccaatac acccgaactg gtgtgttggt gcactcaaag
     1561 ctgcgatgca tgaatgcgtt tcggaccagt tgacgcaacg catccattgg gtacaactcg
     1621 cgccgctgtt ccagttcgac atctttaaag ttaacggcac gcaagttgtg agccgatagt
     1681 ttctcttcaa ggcgtcggat ttggtcagtt acagtgccgt aaatcgactc ttcatctaaa
     1741 acggcgctag cgaggtcatt gccgccaatc cgcaaaaact gtgtgtaagc accgggcagc
     1801 caatcggcgg gtgacttgcc aatgatcaac aatcccagtg tggtcggtgt gggaagatca
     1861 tcacccagaa tcattttggt ggcggccagt tgctgctcgt aactgcgacc gttggcagcc
     1921 agcacgtctg gtgcgaccaa agcgggtaag tactcttgct caaatcgcag acggcttaga
     1981 gcatcgaggt ttgcgctgcg aactggctgc acgtcaaacg gtcgatcgtg gtgtcgcctg
     2041 cgttcattca atatgcgctc atcttgagcg ctcgccaagc ccct
//
LOCUS       DATBNL010000104         3653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_11286, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000104 DATBNL010000000
VERSION     DATBNL010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3653
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11286"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(317..736)
                     /locus_tag="VIC30_01755"
     CDS             complement(317..736)
                     /locus_tag="VIC30_01755"
                     /inference="COORDINATES: protein motif:HMM:NF039485.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HEY7803153.1"
                     /translation="MDLLKLAMNVFQSKLGAQGKDLDIGALQSGLLSLLGDGSNINIA
                     ELVSKFSGGDLAALASSWLGDGANQALSVDSLTSVLGSDKLQAFASAINVSSASANQA
                     LADTIPALIDQSSSGGNLLDSVGGAGGILGAAKGLFS"
     gene            complement(1511..3190)
                     /locus_tag="VIC30_01760"
     CDS             complement(1511..3190)
                     /locus_tag="VIC30_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008165440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta-hydrolase family protein"
                     /protein_id="HEY7803154.1"
                     /translation="MKKLFRVFFRPICGFGLVVGALLFAASLTPSLIPRNYVVQGVLS
                     GIAFGSGYGIGVLLRGLWRYLELPGISASAMRFVTLVVGLPCIALVATSLYHIKSWQN
                     SVRSVMGMDPVESGYPFSASLIAIVIFGILLFLARGLIGFGKVVSRKFYDRFPRRISI
                     VAGVALAGFVTITLTNGVLVEYTFRVLDRSFQQFDAMLEPDRPQPLIAERSGSQASHL
                     DWRELGRAGREFVASGPTAAEITGFSQKAALEPIRLYAGLQVADSPQERAQLLLEELK
                     RVKAFDRSALVIITPTGTGWVDPSAMDGLEYLLNGDVASVALQYSYLNSPMALVFQAE
                     SGLESAQALFRTVYGYWKELEPEQRPKLYLHGLSLGALHSQRALTLFDILDDPIDGAV
                     WSGPPFPSDMWRSLTNNRSPASPEWLPVVENGRFVRFMNQNGTFNQENGPWGDVRFVF
                     LQYASDAITFFEKSLFYREADWMKVPRGPDVSPALEWYPGVSMLQVLIDMPLSDTVPM
                     GYGHVYSPDHYLDAWIEVTATGSWSPDRIEALKALLIKRSQQGDGYAYRGG"
BASE COUNT          989 a         1021 c          862 g          781 t
ORIGIN      
        1 tggcacccga acttagcgac ctattatgag cacctagcag cgcggccttc atttaagaac
       61 accatgccct atgcgcaaac gattacggac aaggttgtat agacaacagt ccttggctgc
      121 cgacacctct tgattcatat ccggccacca aacgaggtga gcccaccgga tcggtgcagc
      181 actaacgcgc aggtgggcca tcaaagcggt ctgacctgac tcgcttgtct gatgattacg
      241 gcgaataaca agaggagacg gatgccatct agtaacgacg catcaaacct tagggtgaca
      301 gcgcaacagt aacatcttag ctaaacagac ctttggctgc acccaagatg ccgcctgcgc
      361 caccaaccga atcaagtaag ttgccgccgc ttgaagactg gtcgataagc gcaggaatgg
      421 tgtcggccaa tgcctggttc gcggacgccg agctcacatt gatggcgctg gcaaacgcct
      481 gtaacttgtc agagccgagc acggatgtca gcgaatcgac cgataaggct tggttggcac
      541 catcgccaag ccatgaactc gcaagcgctg ccaaatcacc gccactgaac ttgctgacaa
      601 gttcagcaat attgatgttg gaaccgtctc ctaaaagact aagcaaaccc gattgcaagg
      661 caccgatgtc aaggtctttg ccctgggcgc caagcttgct ctgaaacaca ttcattgcca
      721 atttaagtaa atccacggct gctctcctta agcaaaacta gttacattca caaaaatcgc
      781 cttggtctgt cgagcaccga caaatcagag cttagtgact tgtaccgttt tttatgttgc
      841 aactgacgtg taattcgcgc cttcacgcca agacaatcac cttcaccacc tgcggcaacg
      901 aatcacttga tggcaacgtc ttgaaataat gaggaaaatg ttgaaccgac atgacgcgca
      961 aactgctggc aatcgcctta ttaggccagt tgcctcactt aaacgtgcta ggtgttaatt
     1021 ggagtcactt tctgttaatt gcagttactt cgaccgacca aagataggcg ttggttgtag
     1081 aagctcggcg atagatcact tgaccgaggt cgccatcgag cagacagatg tttttaaggg
     1141 attgcacaca cgctcctggc ggctgtggtt ttaacgctag cgacaaaaaa caaaagcatt
     1201 tcttataccg gcgcattgtg gggcataacc ctagacaaac gcaatcactt tttattgggc
     1261 tgttgtgatg atgctttccg atatcaactg atgcttggta tcactagcat tggtgagtgc
     1321 tcagatggtg atacaaaccg ctacatctga actgaacaag gccgatagtg atagctcagc
     1381 taaaaagacc tttggctaca cccaagatgg cgcctgcact accaaccgac tcaaataaat
     1441 tgctgccgct tgaagactgg tcgataagtg cggcaatact ctggcagcaa aaaaattgcc
     1501 gcgacacagg ctagccacct cgatacgcat acccatcgcc ctgctgactt cgtttgatca
     1561 ggagcgcctt gagcgcctca attctgtcag gcgaccaact gccggtggca gtcacttcaa
     1621 tccacgcgtc taagtagtgg tcgggagagt acacgtgtcc ataacccatc ggaactgtgt
     1681 cagatagagg catgtcaatg agcacctgaa gcatgctaac gccagggtac cattcgagcg
     1741 ctggggaaac atcaggccct ctgggcactt tcatccagtc ggcctctcga taaaacagac
     1801 tcttctcaaa aaaggtaatg gcgtcactcg cgtactgcaa aaagacaaag cgcacatcac
     1861 cccatgggcc attctcttga ttgaacgtgc cgttttgatt cataaagcga acgaatcgac
     1921 cattctcaac aaccggcaac cattcaggcg aagcagggct cctgttgttg gtcagagagc
     1981 gccacatgtc actcgggaac ggtgggccgc tccagacagc cccatcgatg gggtcatcaa
     2041 gaatatcaaa tagcgtcagg gctctctgag aatgtaaggc accaaggctc aaaccatgca
     2101 aatacagctt aggtcgctgc tcaggctcaa gttccttcca gtatccataa acggttcgaa
     2161 atagtgcctg cgctgactca agcccacttt cggcctgaaa cacaagcgcc atcggactgt
     2221 ttaagtagga gtactgcaaa gccacgctag ccacatcgcc attgagcaaa tactccagtc
     2281 cgtccatggc cgaggggtct acccaccctg ttcccgttgg cgtaataata accagtgcag
     2341 aacgatcaaa cgccttcaca cgtttcaact cttcgagtag caattgtgct cgctcctgcg
     2401 ggctatcggc aacttgaagc cccgcataaa gtcgaatcgg ctccagtgcc gctttctgac
     2461 taaagcctgt gatctcggcg gctgtcggtc cagacgctac aaattctcga ccagcccgtc
     2521 cgagctcacg ccagtcaaga tgtgacgctt gactacccga gcgctctgcg atgagaggct
     2581 gaggacgatc tggttccagc atcgcatcga actgctgaaa tgatcggtcc aacacccgga
     2641 atgtgtactc aaccagcacg ccattggtga gggtgatggt cacgaaacct gcgagggcca
     2701 cgcccgcgac aatggaaatt cggcgaggaa atcggtcata gaactttcgc gagaccacct
     2761 tgccaaaccc gatcaggcca cgtgccagaa aaagcaaaat accgaagatg acaatggcaa
     2821 tgagactggc actgaacgga tacccactct ccacgggatc cattcccatc acactgcgaa
     2881 ctgagttctg ccaggacttg atgtgataga gcgacgttgc caccagcgca atacaaggga
     2941 gtccaaccac cagtgtgaca aacctcatgg ccgaagccga aatcccaggc agttcaaggt
     3001 agcgccagag tccacgcaac agcacgccga ttccgtaccc cgaaccaaag gcaataccag
     3061 aaagcacacc ctgaaccacg tagtttcggg ggatcaagct cggggttagc gacgcggcga
     3121 atagtaacgc accaacaacg agcccaaacc cacatatcgg cctaaaaaaa accctgaata
     3181 attttttcat atgttgatgt catcaccagc cggaagtacc gctaaaagag cgaggtcact
     3241 gctcgcccaa caaattcgct agtgaactgt attcaccgac aacaatctac tttgatcgtt
     3301 tagcgcttgc ctgagtttag gcgacgtcca tttcatcaac cgcaacaaaa cagcgctgcc
     3361 atgcctgccc tctagattaa gcagcttgtc tcaatactag cactagcgcc tttgactgtc
     3421 gcataagctt tgtcctacag tttcacatag ggcaacatcg gcgagggcaa acagcaatga
     3481 ccgaggcaaa gtaagcattt atctttggtt tcctccccgt cccaaaagac gaggattcct
     3541 agcggcttta tcaagccgcc aagattgggt gtgtatcgct acttcccaat ggctcctgct
     3601 tcatctttaa aaccaaggtt tcaactccac aggcgagcac ccgatgccct cgg
//
LOCUS       DATBNL010000105         3375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_11315, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000105 DATBNL010000000
VERSION     DATBNL010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11315"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VIC30_01765"
     CDS             <1..283
                     /locus_tag="VIC30_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003262714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY7803155.1"
                     /translation="RNMNPNLNLIGLLRVMFDARVTLQQQVSAQLEGHFKEKVFSTII
                     PRNVRLAEAPSYGLPGVIYDKSSRGAKAYMEFAKELVARVESDQPTQPV"
     gene            295..1203
                     /locus_tag="VIC30_01770"
     CDS             295..1203
                     /locus_tag="VIC30_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004565932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEY7803156.1"
                     /translation="MVIKKKTKGLGRGLDALLGSDSNALDELSPEKDAAGLQQIQVTA
                     LQAGKYQPRSIMDDTAIDALAESIAQQGVMQPLLVRRLQGEQVQYEVIAGERRLRAAI
                     KAGLAEVPVIIKDVDDEQAAVMALIENIQREDLNPMEEARGIRRLLDEFALTHDQIAG
                     AIGRSRSATSNILRLLNLAAPVQELLMQGSLDMGHARALLPLQSAEQIQAANLIVAKG
                     LSVRQAEQLVTKGLHTSGTRAQRDQTPNQDVLRMQEQLADRLGSKVALKASNKGTGHL
                     TVHFHDWEQFHGLLEKFGLTDLIDKS"
     gene            1323..1787
                     /locus_tag="VIC30_01775"
     CDS             1323..1787
                     /locus_tag="VIC30_01775"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEY7803157.1"
                     /translation="MQYPFGRNILLSTVGFDRLLDAFSELEKSVAENKTVSYPPYNII
                     KLGEHDYAIELAVAGFERDELDVTVENNKLTVTGKVNQERSGEYLHRGIATRDFTREF
                     TLAETVIVQSADMQKGLLNIKLQNVVPEADKPRRIEIGSNAEPRLVDDRKAA"
     gene            complement(1858..2346)
                     /locus_tag="VIC30_01780"
     CDS             complement(1858..2346)
                     /locus_tag="VIC30_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEY7803158.1"
                     /translation="MSTYEQKLQNHLDALDQSILKVLQDDADLTNAKLGELVNASAAT
                     CQRRVSRLKDIGVIRKEVALLDPSLIGQPLMAICEITLISQADEALSAFEHLLSEASR
                     VQQCYRVSAGPDFVLMLVLTDMADYQTFAGTYLTARHGVRNVKTYFVSRRSKFETAYP
                     MP"
     gene            2475..>3375
                     /locus_tag="VIC30_01785"
     CDS             2475..>3375
                     /locus_tag="VIC30_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEY7803159.1"
                     /translation="MCGIVGAVANQNIVPILIEGLQRLEYRGYDSCGVAVHLGGELRR
                     VRSTKRVAELAAQVDLDSITGHTAIAHTRWATHGAPQTQNAHPHFSGRPGRSPRIALV
                     HNGIIENHEELKQTLQAKGYVFESQTDTEVIAHLVDNHYNGDLLVAVQETVKALKGAF
                     AIGVFCRDEPHRIVAAREGSPLVLGLGRHANYLASDALALAGSAERVVYLEDGDIADL
                     QTERVWVFDRAGQEVHRAAQELVAHSNAVELGPYRHFMQKEIFEQPRAVADTLDDLQS
                     ITPELFGDSAHGVFANSDRVLILA"
BASE COUNT          916 a          804 c          875 g          780 t
ORIGIN      
        1 ccgcaacatg aatcctaatt taaatttaat aggcttgttg cgagttatgt ttgatgctcg
       61 cgtaacgctg caacaacagg tgtccgctca gctagagggt cactttaaag aaaaagtatt
      121 ttcaaccatt attccgcgca atgtccgatt ggcagaggcc ccaagctatg gtttgcctgg
      181 cgtcatttat gacaaatcgt cgcgtggcgc gaaggcttat atggaatttg ccaaagaact
      241 cgttgcccgt gttgaaagtg atcagccaac tcaacccgta tagaaaagta agacatggtt
      301 atcaaaaaga agacaaaagg cttaggtaga ggcttagatg cattgctagg ttccgactcc
      361 aatgccttgg atgagctatc ccctgaaaaa gatgctgctg gactacagca aattcaggtt
      421 actgcgttgc aagcgggtaa atatcagccg cgatcaataa tggatgacac agcgatcgat
      481 gcgcttgcag agtcaatcgc ccagcaaggc gtgatgcaac cgctgttagt gcggcgcttg
      541 caaggtgaac aggttcagta cgaggtcatt gccggcgagc gccgcctacg ggctgctatt
      601 aaggcagggc tcgcagaagt gccagtaatc atcaaagatg tcgatgacga gcaagcggca
      661 gtaatggcat tgatcgaaaa catccagcgc gaggatttaa accccatgga agaggctcgg
      721 gggattcggc gactgcttga tgagttcgca ttgactcatg atcagattgc cggcgctatt
      781 gggcgttccc gctctgcgac aagcaacata ttgcgcttac tcaacctggc cgcaccggtt
      841 caagagcttt tgatgcaggg ttccctggat atggggcatg cgagagcgtt actgccactt
      901 caatcggccg agcaaatcca agcagcgaat ttgattgtgg ctaagggtct atcggttcgc
      961 caagccgagc agttggtgac aaaaggcctt cataccagtg gcacgagagc acaacgtgat
     1021 caaaccccaa atcaggatgt tttgcgaatg caagagcaat tggccgatcg gttgggaagc
     1081 aaagttgcac ttaaagccag caataaagga accggccacc taacggtgca tttccatgac
     1141 tgggaacagt ttcacggact gctagaaaag ttcggcttga ctgatttgat cgataaaagc
     1201 tgagcgataa agccaaagtg tcaggggctt gaaaaacggg attgtgaccc tatctccttg
     1261 ttagagacag tgccaatgaa gggctgctct accacttcaa cttgcttctc aaggagatga
     1321 atatgcaata cccatttgga cgcaacatac tgctcagtac cgttggcttt gatcgcttac
     1381 ttgatgcgtt tagtgaacta gaaaaatcag tcgctgaaaa caagacggtg agttatcccc
     1441 cctacaacat cattaaacta ggggaacacg actacgctat cgaattggct gtcgctggtt
     1501 ttgagcgtga cgagctagat gtgacggttg agaacaacaa gctgaccgta acgggcaaag
     1561 tcaaccagga acgcagcggt gaatacctgc accgaggcat cgcaacgcga gactttacac
     1621 gcgagttcac actggctgaa accgtgatcg tgcaatcggc tgatatgcaa aaaggcttgc
     1681 tgaacatcaa gttgcaaaac gttgtgccag aggccgacaa accgcgccgc attgaaatcg
     1741 gtagcaatgc cgaaccgagg ctggttgacg accgtaaggc tgcttaaacc taaatgccac
     1801 ctgtcttagt acccgtgttt gcaggctaga ggagatctaa aaaccttaag cctgcaacta
     1861 gggcataggg tatgctgttt caaacttgct acggcgactg acaaaataag ttttaacgtt
     1921 acgcacacca tgcctggcag ttaaatacgt accggcgaag gtctgatagt cagccatgtc
     1981 tgtcaagacc agcatcagaa cgaagtcagg gcccgcgcta acccgatagc actgttgtac
     2041 acgtgaggct tcagacaaca agtgctcaaa agcacttaac gcttcgtcag cttggctaat
     2101 cagtgttatt tcacagatag ccatcagcgg ctgtccgatc agtgaagggt cgagcagcgc
     2161 aacttccttg cgaatgacgc caatgtcttt cagcctagaa acacgccttt ggcaagttgc
     2221 cgcagaggca ttcaccaact cacctagctt tgcgttggtt aaatcggcgt cgtcttgcaa
     2281 tactttcaag atggattgat cgagagcatc caagtgattc tgcaatttct gctcatatgt
     2341 actcatatta tgggcgttta atccatttca tgctgatatt gcaaaaaact tgcaaacgga
     2401 acgtttctct gcaaaagaaa catttcatac attcgcgata ataacaaaat cgagaatcgt
     2461 tgaggcaaaa tgtcatgtgt ggaatcgtcg gtgcagttgc caaccagaat attgtcccta
     2521 tcctcatcga aggtttacag cgccttgagt atcgtggcta tgactcatgc ggggttgctg
     2581 tacatttggg tggcgaactc aggcgggtcc gtagtacaaa gcgggttgct gagctagcgg
     2641 ctcaagtcga tctagactca ataacgggtc atactgctat cgcgcacacg cgttgggcca
     2701 cgcacggtgc accacaaacc cagaatgccc atccgcattt ttctgggcgg ccagggcgct
     2761 caccacggat cgcgttggta cacaacggca tcattgaaaa ccacgaagag cttaagcaga
     2821 cactccaagc caagggttat gtatttgaga gccaaactga cacagaggtt atcgctcatc
     2881 tggtagacaa tcattacaac ggtgatctct tggttgcagt gcaagagacg gttaaagcat
     2941 tgaaaggcgc atttgcgatc ggcgtttttt gtcgcgacga gccgcaccgc atcgtcgcgg
     3001 cgcgcgaagg atcgccgctg gtcctaggct taggaaggca tgcaaactac ttggcctcgg
     3061 atgcattggc acttgctggt tcagccgaac gagtcgtcta tctggaagac ggtgatatag
     3121 ccgacttaca aacagagcgg gtgtgggttt ttgacagagc agggcaagaa gtgcaccgag
     3181 ccgctcagga gttagtggcg cacagcaacg ctgtcgaact cggcccatac cgacatttca
     3241 tgcaaaaaga aatttttgag caaccaaggg ccgtagctga cacgctcgat gatttacaaa
     3301 gtattacccc agaactattt ggcgattcag cgcacggcgt ttttgccaac agcgatcggg
     3361 ttttgatact ggctt
//
LOCUS       DATBNL010000106         2441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_11334, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000106 DATBNL010000000
VERSION     DATBNL010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11334"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VIC30_01790"
     CDS             complement(<1..797)
                     /locus_tag="VIC30_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019578110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY7803160.1"
                     /translation="MQSLQSVGYFPDRRLATAVHLATKLGRPLLLEGDPGVGKTELAK
                     ALAAITARHLIRLQCYDGLEQRDALYEWNYAAQLIHLKAAQTTRTPEEIEREVYQAHY
                     LIKRPLLQALQTAGAGAVLLIDEVDRADEPFEAFLLEYLGEYQVSIPELGTITAQTPP
                     LTILTSNRTRDLNDAVKRRCLYHWVDYPDRERELAIIAQQVPGITVKLSEQVATFVAR
                     LRDRPFADAFSRSPGIAESVEWAKALVALETLQLDPEVVENTAGVLF"
     gene            complement(837..1637)
                     /locus_tag="VIC30_01795"
     CDS             complement(837..1637)
                     /locus_tag="VIC30_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013803613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY7803161.1"
                     /translation="MYQFEFKRAESLDEAAKLLNEGGQLLAGGQTMLASMKQRLMQPE
                     TLVDLQGLSDLAGICEDGNALVIGAMTRHQAVATDPMVNSKIPALAHLAGGIGDKQVR
                     AMGTLGGSVANNDPAACYPSAVLGLGATVKTNKREIAADDFFEGLYATALEPDELITA
                     VRFPVPQMAAYAKFKQPASRYALVGVFVAKTDGGVRVAITGAGNGVFRHEGLEAALNA
                     DFSTDAVENVVIDASDLSGDLHASPEYRAHLIKIQTQRAVNQALGQES"
     gene            complement(1662..>2441)
                     /locus_tag="VIC30_01800"
     CDS             complement(1662..>2441)
                     /locus_tag="VIC30_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007853460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY7803162.1"
                     /translation="DIVHGDTGRVPFGMGTYGSRSISVGGSAIMRAIDKIEAKAKKIA
                     AHLMEASDTDIEFADGEFTVKGTDKKVPFAQVALSAYVPHNYPLETLEPGLNETAFYD
                     PTNFTFPAGTYICEVEINPKTGETRVDRFTAMDDFGTIINPMIVEGQVHGGLAQGIGQ
                     ALMENCVYDRETAQLLTGSFMDYTMPRADDLPNFKIGHVCTPCTTNPLGTKGCGEAGA
                     IGSPPAVINAVLDALAPLGVKDFDMPATPHRVWEAIEKAKA"
BASE COUNT          511 a          674 c          693 g          563 t
ORIGIN      
        1 ttaaagagca cgccagcggt gttttctacg acctcggggt cgagttgcag tgtttcgagt
       61 gccaccagtg ccttggccca ttccacactt tcggcaatgc cgggtgagcg gctaaacgca
      121 tcggcaaagg gccggtcgcg cagtcgcgcc acaaacgttg ccacttgctc actgagtttg
      181 accgtaatgc caggtacttg ctgcgcgatg atagccagtt cacgctcccg gtcagggtag
      241 tccacccagt gatacagaca gcggcgtttg accgcatcgt ttaaatcacg ggtgcggttg
      301 ctagtcagaa tcgtcagcgg cggtgtttgt gcggtgatgg tgccaagctc agggatactg
      361 acttgatatt cgccgaggta ctccagcaag aacgcttcaa atggctcatc ggcacgatca
      421 acctcgtcga tcagtagcac tgcgcccgca ccagcggttt gcagggcttg cagcaaaggg
      481 cgtttgatca ggtaatgggc ctgatagacc tcacgttcga tttcttctgg tgtgcgcgtg
      541 gtttgtgctg ctttcaagtg gatgagctgc gctgcgtagt tccattcata gagcgcatca
      601 cgctgctcca agccgtcata gcattgcagt cggatcagat gccgcgcagt aatggcagcc
      661 agtgctttgg ccaattcggt cttgccaaca ccggggtcgc cctctagtaa cagaggacgc
      721 ccgagtttgg tggccaaatg cacggctgtg gccagcctac ggtctgggaa ataaccgaca
      781 gactgcaggc tctgcatcca cgcatcaacg ttgtcaggtt gttgcgcttc agacaatcaa
      841 ctctcctggc ctagtgcctg attgacagca cgttgggttt ggattttgat gagatgagct
      901 cgatactcgg gacttgcgtg caaatcgcca cttaagtccg aggcatcaat gacgacgttt
      961 tcaacggcat cggtcgagaa gtccgcgttt aatgccgctt ccaagccctc gtgacgaaac
     1021 acgccgttgc cagcgccggt gatagcgacg cgcacaccgc catcggtttt ggctacaaac
     1081 acgccgacca acgcataacg cgaggcgggt tgtttgaact tggcgtaagc cgccatttgc
     1141 ggcacaggaa accgtaccgc ggtgatcaac tcgtcaggct caagtgctgt ggcatatagg
     1201 ccttcaaaga aatcatcggc tgcgatctca cgcttgttgg ttttaaccgt ggcgcccaag
     1261 cctagaacgg cactcggata gcaagcggct gggtcgttgt tggcgaccga accccctagg
     1321 gtacccatgg cgcgaacctg cttgtcaccg atgccaccgg ccaagtgagc cagcgccgga
     1381 atcttgctat tgaccatggg gtccgtggcc acggcttgat ggcgagtcat ggcgccgatg
     1441 accagtgcat tgccgtcttc acagatgcct gcaaggtcag acaacccttg caagtcaacc
     1501 agcgtctcgg gttgcatgag gcgctgtttc atggacgcca gcatggtttg accaccagcc
     1561 agtaactggc cgccttcgtt taacaatttg gccgcttcat ccagagattc ggcacgcttg
     1621 aattcaaact gatacatgat gtgttgctcc ctttggctgc cttaggcttt ggctttctcg
     1681 atggcttccc acacgcggtg cggtgtggct ggcatgtcaa agtctttgac gcccaacggt
     1741 gccaacgcat caagcacggc attgatcaca gcaggtggcg aaccaattgc accggcttca
     1801 ccgcagcctt tggtgccaag cggattggtg gtgcagggcg tgcaaacatg accgatctta
     1861 aagttaggca ggtcgtcggc acgcggcatg gtgtagtcca tgaaagagcc cgtgagcaac
     1921 tgtgccgtct cgcggtcata gacgcagttc tccatgagtg cctgaccaat accttgcgcc
     1981 aaaccaccgt ggacctggcc ttcaacgatc atggggttaa tgatcgtgcc aaagtcatcc
     2041 atagcggtaa agcgatccac ccgggtttca ccggttttag gattgatctc cacttcacag
     2101 atgtaggtcc ctgctgggaa agtgaagtta gtaggatcgt aaaacgcggt ttcattcaaa
     2161 cccggttcaa gcgtctcaag cggatagttg tgtggtacgt aggcgctcag tgccacttgg
     2221 gcaaacggca ctttcttgtc ggtgcctttg acggtgaatt cgccatcagc gaactcgatg
     2281 tcggtgtcgc tggcttccat caagtgcgcg gcgatttttt tggctttggc ttcaatcttg
     2341 tcaatcgcac gcatgatggc cgaaccaccc acagagattg agcgtgaccc gtaggtgccc
     2401 atgccaaagg gcacacggcc ggtgtcgcca tggacaatat c
//
LOCUS       DATBNL010000107         1562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1353, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000107 DATBNL010000000
VERSION     DATBNL010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1353"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1560)
                     /locus_tag="VIC30_01805"
     CDS             complement(64..1560)
                     /locus_tag="VIC30_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY7803163.1"
                     /translation="MTTELEMPVSETIVPALDEILHALRVVVPEHCILARDEQKRPYE
                     CDGLSLYRQLPLLVVLPETEVQVQGVLRAARRLNVPVVTRGAGTGLSGGAMPHAQGIL
                     LGMSKFNRIKHVDAQAATAVVEPGVRNLAVSEAVAHLGLYYAPDPSSQIACTIGGNIA
                     ENSGGVHCLKYGLTIHNVLKVRMVTLDGEIIELGSEAPEAPGPDLLSAFIGSEGMLGV
                     VTEVTLRLLPKPALAKVIMASFDDVETAGAAVAAVIGAGIIPAGLEMMDQRATQMVEP
                     FVKAGYDIDAKAILLCESDGTEVEVAEEIGRMTEVFEGAGATRIQVSETERERLLFWA
                     GRKNAFPAAGRVSPDYYCMDGTIPRRHLAKVLQAIEGMETTYGLRCANVFHAGDGNLH
                     PLILFDSNDLDEVDRAEKFGAAILELCVEVGGSITGEHGVGLEKINEMCVQFNRDELD
                     TFFGVKRAFDPDGLLNPDKVIPTLVRCAEHGKMHVHGGQLPFADIPRF"
BASE COUNT          379 a          482 c          385 g          316 t
ORIGIN      
        1 gctgcaagtt ggctctagct gtggtgactt gctcacacag ctgtgacaaa gcgtaatcca
       61 tcgttaaaac ctcggaatgt cagcaaacgg caactgtccg ccgtgtacgt gcatcttgcc
      121 gtgctcagcg cagcgcacca gcgtcggaat caccttgtca ggattcaata gaccatccgg
      181 gtcaaacgcg cgcttgaccc caaaaaatgt atcgagctcg tcgcggttga actgtacaca
      241 catctcgttg attttctcga gtccaacacc gtgttcaccg gtaatcgagc cgcccacctc
      301 aacgcatagc tcgagaatgg ccgcaccaaa cttttccgct cgatccactt cgtcaagatc
      361 gttggaatca aaaagaatga gtggatgcag gttgccatcg ccggcatgaa acacgttggc
      421 gcaacgtaaa ccgtaggtgg tctccatgcc ctcaatggct tgcagcactt tggccaagtg
      481 ccgcctcggt atggtgccat ccatgcaata gtagtcgggt gagacgcgac cggctgctgg
      541 aaacgcattc ttgcgccccg cccagaacaa caaacgctcg cgctcggtct cggagacttg
      601 aatacgcgtg gcgcccgcgc cttcaaacac ctcagtcatt cgaccaattt cctcggcgac
      661 ttccacctcg gtgccatcgg actcacacaa caagattgct ttggcatcaa tgtcgtagcc
      721 cgctttgaca aagggctcaa ccatttgcgt ggcgcgctga tccatcattt ctagacctgc
      781 cgggataata ccggcaccaa tcacagcagc caccgcggca cccgcagtct caacatcatc
      841 gaaactggcc atgatcactt tggccaaagc cggcttgggt aacaatcgca acgtgacttc
      901 agtcacaacc ccaagcatgc cttcagagcc aataaacgca gagagcaaat cagggccagg
      961 cgcttccggt gcttcgctac caagctcaat gatttcaccg tccagtgtca ccatacgcac
     1021 tttgagcacg ttatggatgg tcaaaccgta tttcaggcaa tgcacgccgc ctgagttctc
     1081 agcgatattg ccaccgatcg tgcaggcgat ctggctcgag ggatccggtg cgtagtaaag
     1141 acccagatgc gccacagcct cagagacggc aagattgcgc acgccgggtt ccacaactgc
     1201 ggtagcagcc tgagcatcaa cgtgcttgat acggttgaac ttggacatgc caagcaagat
     1261 gccttgggca tgcggcatgg cgccaccaga taagcctgta cccgcgccgc gggtgaccac
     1321 aggcacattc aagcgcctcg cagccctcaa aacgccctgc acctgaactt ccgtctcagg
     1381 caacaccacg agcagtggca gttgtcggta aagagacaaa ccatcacatt cataaggccg
     1441 cttttgttcg tcgcgtgcaa ggatgcaatg ctcaggcacc accacacgca acgcatgcaa
     1501 aatctcgtca agcgccggca caatcgtctc ggacacaggc atttccagtt cagttgtcat
     1561 cg
//
LOCUS       DATBNL010000108         2293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_100947, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000108 DATBNL010000000
VERSION     DATBNL010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100947"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VIC30_01810"
     CDS             complement(<1..514)
                     /locus_tag="VIC30_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012365921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEY7803164.1"
                     /translation="MRIGVPKEIKNHEYRVGLTPASVRELVLSGHEVMVETNAGSAIG
                     MLDADYQAAGAIITDTVAEVFDQADMIVKVKEPQLAECAMLKPGQLLYTYLHLAADPE
                     QTKALMQSGAVCVAYETITGPGGGLPLLAPMSEVAGRMSVQAAATHLEKVRGGKGVLL
                     GGVPGVKAGHV"
     gene            605..1528
                     /locus_tag="VIC30_01815"
     CDS             605..1528
                     /locus_tag="VIC30_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007854766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7803165.1"
                     /translation="MKVKNKAHLGQLSDMDLRLLQIFKSVVDCGGFSAAALAMNIGVS
                     TVSRHIKDLETRLGLVLCQRGRSGFALTAEGQSVYAEVLRLLQAMDTFRSSIDDIHWR
                     LDGQLNLALFEKSIHNPNAHIPQALKQFAQEAPQVSLSIHVRTIQEVERGVIDGSFDV
                     GVIPAHRHADCLDYTPLFVERMQLYGSADHPLAQHPDTVLSWQDLQDHPLAGLAYHSP
                     NMQVSQGAGLRRTGHAYDQEGVAALILSGQFIGFLPTHYARGFEVQGQLIAISCKTLH
                     YDAEFFSITRRSPAPNRASKLFNQCLKKAHS"
     gene            1665..>2293
                     /locus_tag="VIC30_01820"
     CDS             1665..>2293
                     /locus_tag="VIC30_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013233110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803166.1"
                     /translation="MPVEDSTSESDYLVFKEVKKTYDQKTLVVRDFSLNVAKGEFITL
                     LGPSGSGKSTVLMMLAGFEGVTSGDISIGGVSITRTAPYNRNIGMVFQNYALFPHMTI
                     AENLAYPLSIRKKSQSEIKETVKEYLGLIEMQDFGGRYPGQLSGGQRQRVALARALIF
                     NPSLVLMDEPLGALDKKLREQMQYEITRLHETMGFTVIYVTHDQTEALS"
BASE COUNT          545 a          632 c          576 g          540 t
ORIGIN      
        1 ccacgtggcc ggctttaacc ccgggcacac caccgagcaa cacgcctttg ccaccacgga
       61 ctttctccag atgggtcgcc gcggcctgca ccgacatacg accagcgacc tcactcatgg
      121 gtgccaatag cggtagacca ccaccgggtc cagtgatggt ttcatacgcc acgcacaccg
      181 cgccagattg catcaaggct ttggtttgct cagggtcagc cgccaaatgc aggtaggtgt
      241 agagcaactg acctggcttt agcatggcgc attctgctag ctgcggctct ttgactttga
      301 cgatcatgtc ggcttggtcg aacacctcgg caactgtgtc ggtgatgatt gcgcctgctg
      361 cctggtagtc ggcatcgagc atgccaatgg cgctgccggc gtttgtttcg accataacct
      421 catggccgct tagcaccagt tcacgcacgc tagcaggggt tagaccaaca cgatattcgt
      481 ggtttttgat ttccttgggt acaccaatgc gcatctaaag tctcctctaa gtgaatgccg
      541 cgagatagtg ccacgagcag cgcgggatta acatgcctac ctgtcgtcat ttgcttgcgt
      601 aaaaatgaaa gtaaagaaca aagcacactt gggtcaactc agtgacatgg atttaaggct
      661 gctccagata tttaaatccg tggtggactg cggtggtttt tctgctgccg cactggccat
      721 gaacattggc gtgtcgaccg tctcacgcca catcaaagac cttgagaccc gactcggact
      781 cgtactttgc cagcgcggtc gatccgggtt tgccttgact gccgaagggc aaagtgtgta
      841 cgccgaagtg ctcagactac tgcaagccat ggacacgttt cggtcaagca tcgatgacat
      901 tcactggcgt cttgacggcc aactcaatct ggctttattt gaaaaaagca ttcacaaccc
      961 caacgcccat atcccgcaag cactcaagca attcgcgcaa gaggcaccac aagtcagtct
     1021 gagcattcat gtcagaacga tccaggaggt cgagcgcggg gtcatcgacg gcagtttcga
     1081 tgtgggtgtg attccggccc accgccatgc cgattgcctt gactacacac cgttgtttgt
     1141 tgagcgcatg caactctatg gcagcgctga tcaccctctg gctcaacacc ccgatacagt
     1201 tctatcttgg caggaccttc aagaccaccc ccttgcaggt ctggcttatc actcgcccaa
     1261 catgcaagtc agccaggggg caggactgcg ccgcactggc catgcctatg accaggaagg
     1321 cgttgccgca ttgatactgt ctgggcaatt catcggattt ttacccaccc actacgcgcg
     1381 aggttttgaa gttcaaggtc agctaatagc catcagttgc aaaacgcttc attacgacgc
     1441 cgagttcttt agcatcacca gacgatcacc tgcgcctaac cgtgcctcaa agttgttcaa
     1501 tcaatgcctc aaaaaagcgc attcatgagc cgtctaggtg cattccctaa aaaagcgcca
     1561 atcttcttga tttctgatgt tcaaagcacg cgaatttcgg tataactcgt gatgtttcat
     1621 tgttttaacg cgtcacgatt ggggcgtttt gagttgggtt acgcatgcca gtagaagatt
     1681 ccacgagtga gagcgactac ctcgttttta aagaagtcaa aaaaacttat gaccaaaaaa
     1741 cgttagtcgt tagagatttc agtctgaacg tcgccaaggg cgagttcatc acgttgcttg
     1801 ggccatctgg ctcaggcaag agtacggtgc tgatgatgct tgctgggttc gaaggtgtca
     1861 ccagtggtga tatttcaatc ggtggcgtgt cgattacgcg caccgcacct tacaaccgca
     1921 acatcgggat ggtgttccag aactacgcct tgttccccca catgaccatt gccgagaact
     1981 tggcatatcc gttatcgatt cgcaagaagt cgcaaagcga aatcaaagag accgttaaag
     2041 aatatcttgg cttaatcgaa atgcaagact ttggtggccg ctaccccgga cagttatccg
     2101 gtggccagcg ccaacgtgtg gccttagcac gagccctgat atttaatcca tcgctggtac
     2161 taatggatga gccgctcggt gcgctcgaca aaaaacttcg tgagcagatg caatacgaaa
     2221 tcacccgtct gcacgagacg atgggcttca cggtgatcta tgtcacccac gaccagactg
     2281 aagcgctctc gat
//
LOCUS       DATBNL010000109         3626 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_31292, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000109 DATBNL010000000
VERSION     DATBNL010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3626
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31292"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="VIC30_01825"
     CDS             complement(<1..643)
                     /locus_tag="VIC30_01825"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803167.1"
                     /translation="MSQNLRAPTLQAPSFRLDGKRALITGGSRGIGLTAAFALGQAGA
                     EVVLAARDGAGLAQARTMLCEHGLMSSSVATVVLDVTDASAVKQAVAALGPCQVLVNN
                     AGGNRAGLLKDKTAQDIEAVLRLNVTSSMVVSQAVIAALVAADQTGSIINLSSQYGHI
                     GSPERTLYSAAKHAVEGYTKSLAWEVGSLGIRVNTVAPSMIETDMTRERLNQPG"
     gene            complement(640..1380)
                     /locus_tag="VIC30_01830"
     CDS             complement(640..1380)
                     /locus_tag="VIC30_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006225843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY7803168.1"
                     /translation="MTPSTLDIDMSLPANVQAALETVSTATLTTVLLKKGLRNVWLRG
                     TRPLRTGQPRIVGRAFTLRFVPAREDLATPASWSSPISTRAAIEAMPAGCVAVVDAMG
                     VTDAGIFGDILCARMAKRGVAALVSDGVVRDISGVLATGLPVWCQGAAAPASVTSLTF
                     VAWQQPIGCGGVAVMPGDVIVVDDDGAVLIPTDLLDEVVAQALEQEKLEGWIMKRIEA
                     GETLPGLYPPNEENLARYRQDHQDHQTS"
     gene            complement(1429..2376)
                     /locus_tag="VIC30_01835"
     CDS             complement(1429..2376)
                     /locus_tag="VIC30_01835"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY7803169.1"
                     /translation="MRADASELDASAKGVYLITVTPFMPDGALDVGSIDRLVDFYLDA
                     GANGLTLLGVLGEAPKLTALEATEYVKRVLARVNGAVPVVVGASAAGFAAMGELTKRV
                     MDIGANGVMVAPAAGLRTDDQIRAYFAMVNETLGADVPWVLQDHPNATGVQMSGALVM
                     QIIDQSPQCVMLKHEDSPGLNKLSAIRAAQAQQTLKPVSILSGNGGGLFLPEELERGA
                     DGAMTGFAYPEMMVQVCNAHAAGDVDRAFDVFDAYLPLSRYEQQAGIGLAVRKYLLAK
                     RGAIASDTLRKPGPVLSKQDVIDIERLIKRQEKRLTELG"
     gene            complement(2391..3389)
                     /locus_tag="VIC30_01840"
     CDS             complement(2391..3389)
                     /locus_tag="VIC30_01840"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7803170.1"
                     /translation="MMQRVAVVGAGLAGLTCAQTLRAAGCEVVVFEKSRGPGGRLSTR
                     RTASAQFDHGAPYFMVQDPRFAAFIEARLADGSVAVWAPSVQELGALDRAPWYVGTPG
                     MSALGRMQAQGLDLRLEQRVASLARQGSRWHIKLEDESMIDGFDTVVIAVPNAQAVPL
                     LAEHAPQWASQLEQTPMNACWTVMLSTAEPLTEFDADQPANSAIGWWLRNSSKPGRPV
                     TPDRHDWVLHATEAWTTAHLDDDKAQVGQVLIKAFGDLLGKSATPIEAPMVHRWLYAR
                     RSGDAQPLAEPWWRADLSLGVCGDGLGHGGVERAYLSGLDMGQAILRSEGQNKEKQ"
BASE COUNT          810 a         1160 c          909 g          747 t
ORIGIN      
        1 cacccggttg attaagacgc tcgcgggtca tatccgtttc gatcatcgaa ggcgccacgg
       61 tgttgacacg aatacccaac gaccccactt cccaggccag tgacttggta tagccctcaa
      121 cggcatgttt ggcagcactg tatagcgtac gttccggtga gccaatgtgg ccatattggg
      181 aagacaggtt aatgatgctg cctgtctgat ctgcggccac tagtgccgca atcaccgcct
      241 gagacaccac catgctcgag gtcacattca ggcgcaatac cgcctcaata tcttgcgcag
      301 tcttgtcttt gagcaggcct gcgcggttac cacccgcatt gttaacgagc acctgacatg
      361 ggccaagcgc tgccactgcc tgcttaaccg cactggcatc ggtgacatcg agaaccacag
      421 tcgccaccga tgatgacatc aacccgtgct cgcacaacat cgttctggct tgcgccaaac
      481 cagccccatc acgtgcggcc aagaccactt cagcaccggc ctgtcctagc gcaaaagccg
      541 ctgtcagacc gataccccga ctgcctccag taatgagagc acgcttgcca tctagcctga
      601 aactcggtgc ttgtaaggtc ggtgctcgca ggttttgact catgatgtct gatgatcctg
      661 atggtcctga cgataccgag ctaaattctc ttcattgggc ggatacaggc ccggcaacgt
      721 ctctccggcc tcgatacgct tcattatcca gccttcgagt ttctcttgtt cgagcgcttg
      781 cgccaccacc tcatcaagca aatcggtggg tatcaacacc gcaccgtcat catcgaccac
      841 gatcacgtca cccggcatta ccgccacccc gccacaacca atcggttgct gccaagccac
      901 aaaggtcagg ctcgtcaccg aggccggtgc cgctgccccc tgacaccaaa ccggcaaacc
      961 cgtggccaag acgccactga tatcacgcac cacgccgtca gagaccagtg ccgcaacacc
     1021 gcgtttggcc atgcgcgcac acaagatatc cccaaaaatc cccgcatcgg tcacgcccat
     1081 ggcatcgacc acagcgacac acccagctgg catggcctca atcgcggccc gcgttgaaat
     1141 aggcgaagac caagatgccg gtgtggctaa atcctctctg gctggcacaa agcgcaaggt
     1201 aaatgcgcgc cccacaatgc gtggctggcc tgtgcgcagc ggtctggtgc cacgcaacca
     1261 aacgttgcgt aaacccttct ttagcaacac cgttgtcaaa gtagcggtag acacggtttc
     1321 taaggctgct tgcacgtttg ccggcaagct catgtcaata tccagtgtgc taggcgtcat
     1381 atgtcgtcct ttgctttgtt taaggccgaa ttaagaacta attaaaacct aaccgagttc
     1441 agtcaggcgt ttttcttggc gtttaatcaa gcgctcaata tcaattacat cctgtttaga
     1501 gagcaccggg ccaggctttc gcagtgtgtc cgatgcaatg gcaccgcgct tggccagcaa
     1561 atacttgcgc accgccaatc caatgcccgc ttgctgttcg tagcgcgaca gcggcaggta
     1621 ggcatcaaac acatcaaatg cgcggtccac atcaccagcc gcgtgggcgt tgcagacttg
     1681 caccatcatc tcgggataag caaacccagt catggcacca tcggcgccgc gctcaagctc
     1741 ctcgggtagg aacaagccgc cgccgttgcc cgagagaatg gacaccggtt ttaatgtctg
     1801 ctgcgcttgg gcggcccgaa ttgccgagag cttgttaagc cccggactgt cctcgtgttt
     1861 gagcatgaca cactgcggcg attggtcaat gatctgcatg actagcgcgc ctgacatttg
     1921 tacgccggtg gcattggggt ggtcttgcaa cacccatggc acgtccgcgc ccaatgtttc
     1981 gttgaccatg gcaaagtagg cgcgaatctg gtcatcggta cgcagcccag ccgcaggcgc
     2041 caccatgacg ccgttagcgc cgatgtccat gactcgcttg gtaagttcac ccatggcagc
     2101 aaatccagca gccgaggcac cgaccaccac gggcactgcg ccatttacac gcgccaacac
     2161 tcgtttgacg tactcggttg cctcgagcgc ggtcagtttc ggggcttcac ccagcacgcc
     2221 tagcagcgtc aaaccgttgg ccccagcatc cagatagaaa tcaactaacc ggtcgatgct
     2281 accgacgtcg agggcaccgt caggcataaa gggggtcact gtaataaggt agaccccctt
     2341 ggccgacgca tcaagctcac tggcgtctgc ccgcattgta tctgtactca tcactgtttc
     2401 tccttattct gcccttctga ccgcaaaatc gcctgtccca tatcaagacc agacaagtag
     2461 gctcgctcga cgccaccatg gcccaagcca tcaccacaca cacccagtga cagatcagca
     2521 cgccaccaag gttcggctaa cggctgagca tccccgctgc gacgtgcata aagccagcga
     2581 tgcaccatgg gagcctcaat tggcgtggcc gatttgccca acaagtcacc aaaagccttt
     2641 atcagcactt ggccgacttg cgctttgtca tcatcgaggt gagccgtcgt ccaagcctcg
     2701 gttgcatgca gcacccagtc gtgacgatct ggcgtcaccg ggcgccctgg tttgctgctg
     2761 ttacgcagcc accaaccaat ggcgctgtta gcgggctgat cagcatcgaa ctcggttaat
     2821 ggctctgccg ttgatagcat caccgtccag catgcattca tgggtgtttg ttcgagctgg
     2881 cttgcccact gaggtgcgtg ctcggccagc aaaggcacgg cttgcgcatt gggcactgcg
     2941 atcacgaccg tatcaaagcc gtcaatcatc gattcgtctt ctaacttgat atgccaacgt
     3001 gacccttgcc tagccaatga ggccacacgc tgctcgaggc gcaagtcaag gccctgtgcc
     3061 tgcatcctgc ctagcgcgct catgccaggg gtaccgacat accaaggtgc tcggtccaag
     3121 gcgccaagct cttgaacgct aggggcccaa actgccaccg acccatcagc aagacgggct
     3181 tcgataaagg cagcaaaccg cggatcttgc accatgaaat acggtgcgcc gtgatcgaat
     3241 tgcgccgacg ctgtacgacg cgtcgatagc cgcccaccag ggccgcgtga tttctcgaac
     3301 acgaccacct cacaaccggc tgccctcaag gtttgcgcac aagtcaatcc ggctagacca
     3361 gcccccacca cagcaactcg ttgcatcatc accccttgct aaacaaatgc attgccatcg
     3421 caacgccaaa ccctaaccat agcaaacttg cgtgccacct cgttggttga ggtttcgcag
     3481 gggaaaacac accaggttct gttctaattg gcgttgttgc aatgcacagt ggttcagcta
     3541 cccgcatgaa aaacttacgg tttcctttat tgtcaattgt gttcgcgctg gttgtcaccg
     3601 cctgcggcga aaccaatgag cccaac
//
LOCUS       DATBNL010000110         2157 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_130936, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000110 DATBNL010000000
VERSION     DATBNL010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130936"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..907)
                     /locus_tag="VIC30_01845"
     CDS             complement(101..907)
                     /locus_tag="VIC30_01845"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7803171.1"
                     /translation="MSNLSRFSHLGIRDVLMALSRFDLAGTLGWQDVKQRYRRSKLGP
                     FWLTISMGVLIGALGLVFGTIFKSPLAEFLPFLAIGIILWTFIATVINEGCTAFISSD
                     SVIKQLPLPLFLHVLRVVWRNLVILAHNVVIIPLLFIIFLYAPGWVALLAIPGLIVST
                     FTLTAVALFAGVLCTRYRDLTQIIGSVLQIAFYVTPIIWMPSMMSGRAEFVFLEINPF
                     YHLIEVVRAPLLGQLPSMTNWVVSIGMAVVAWLLTLWMYGKYKNRISYWL"
     gene            complement(1051..>2157)
                     /locus_tag="VIC30_01850"
     CDS             complement(1051..>2157)
                     /locus_tag="VIC30_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015012438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEY7803172.1"
                     /translation="TGLNPYQTGTVTCLVEILAQFNAQAELDHEFLIFCSPAVRHHFD
                     ALGLDNRFKLVMTPSRKLAQLVWQQTVLPYQLWRLKADVHWGPTFVLPMIRVCPMVVT
                     IHDMTFELFAHAHEPIKRIYFPFMIRRAVKRATHVLCISQSTADDLTRLVKTSQGKVV
                     ITPLAARQIRGPLEACAAADACALPTQPYLLYVGTLEPRKNLARLLQAWQSLDVTERA
                     DYQLVIVGVKGWMIESLLAQAHESAQHRAAVEVVGHVSNSSLDALLKHATAFVYPSLY
                     EGFGLPVIEAMAAGVPVLTSNVGATREIAHDAALLVDPHSVPAIKDGLSSLLQDQALR
                     QRLAAAGLARAAKYDWSRTGTLTLDALTAAKTGG"
BASE COUNT          585 a          605 c          523 g          444 t
ORIGIN      
        1 tatcaagcgt ttttttaacg atcggccggt tgagttgaag atcggaaaat caacgcagac
       61 tccctcaaat ttaatcaatg ccattgttat tctgacccgt ttacaaccag taactgattc
      121 gattcttgta cttgccgtac atccaaagtg tcagcaacca cgccaccacc gccatgccga
      181 tcgagacgac ccaattggtc atgctcggca actgcccaag aagcggcgca cgcacgacct
      241 caatgagatg gtagaacgga ttgatttcca gaaacacgaa ctccgcgcgc ccgctcatca
      301 tcgacggcat ccaaataatc ggcgtcacat agaatgcgat ctgcaatacg ctaccaataa
      361 tttgcgtcag atcccgatag cgcgtgcaca gaacgccggc aaacaaagcc accgctgtca
      421 acgtaaaggt gctgacaatc agcccaggga ttgccagtaa ggcaacccag cctggtgcgt
      481 atagaaaaat gatgaacagc agcgggataa tcaccacgtt gtgagccaga atcacgagat
      541 ttcgccatac cacccgcaga acatgcaaaa acagtggcag tggcaactgc ttgatcacgc
      601 tgtctgaact gatgaaagct gtgcagccct cattgatgac cgtggcaata aaagtccaca
      661 agataatacc aatcgcaagg aaagggagaa actcagccaa tggcgactta aaaatcgtgc
      721 caaacaccaa accgagcgca ccaatgagca cgcccatact gatcgtcaac caaaacggcc
      781 caagtttaga acggcgatag cgctgtttaa cgtcttgcca gcccagcgta cccgcaagat
      841 cgaaccgaga cagtgccatc aacacgtccc gaatacccaa atgggaaaaa cgacttaaat
      901 tagacaactt gctaccccat cgctcggact gcgccgatag acttggatta tttcacaacc
      961 catcgattcc tgttttttta gccaacatct cgtctgcctg atgccttcgt gaaaatatcg
     1021 tttgcaaggt ccgcccattt tgcctggccc ctaaccaccc gttttagcgg cggtcaatgc
     1081 gtcaagggtc aatgtgcccg tgcgtgacca gtcatattta gcagcccttg cgagtccggc
     1141 ggcggctaac cgctggcgta acgcttgatc ttgcaacagc gaacttaacc catctttaat
     1201 ggcaggcacc gaatgcgggt caacgagcag cgccgcatca tgggcaattt cacgggttgc
     1261 ccccacatta ctcgttaaaa ccggtacacc ggcggccatg gcttcaatga ctggcaagcc
     1321 aaatccctcg tacagggatg gatacacgaa tgcggtggcg tgctttagta gcgcatccag
     1381 cgatgaatta ctgacatgac cgacaacctc gacggctgcc cgatgctgcg ccgattcatg
     1441 cgcttgggcc agcaacgatt caatcatcca gcctttaaca ccgacaatca ccagctgata
     1501 gtcggcgcgc tcagttacat ccagactttg ccaagcctgc aacagtctgg cgaggttttt
     1561 acggggctcc agtgtgccga cgtacaaaag atagggctgg gttggtagcg cgcacgcatc
     1621 ggctgctgca cacgcctcga gtggtccacg tatctgacgt gcggccaatg gagtgatcac
     1681 cactttacct tggcttgtct tgaccaaccg ggtgaggtca tcagcggtgg actgagaaat
     1741 acaaagcacg tgggtggcgc gcttgaccgc ccgacggatc atgaaaggga aatagattct
     1801 cttaatcggt tcgtgcgcgt gcgcaaacaa ctcaaaggtc atgtcatgga tcgtcacaac
     1861 catcgggcag actcggatca tgggcaacac aaaagtaggc ccccaatgca catcggcctt
     1921 taagcgccac aattgatatg gcaacaccgt ttgttgccaa acaagctgtg ccagcttgcg
     1981 agacggtgtc atgaccagct tgaaacgatt atcaaggcct agagcatcga agtgatgacg
     2041 caccgctgga gagcaaaaga tcaaaaactc atggtcaagc tctgcttgcg cgttaaattg
     2101 cgccaggatc tccaccaaac aggtcacggt acctgtctgg tagggattca gaccagt
//
LOCUS       DATBNL010000111         1688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1413, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000111 DATBNL010000000
VERSION     DATBNL010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..752
                     /locus_tag="VIC30_01855"
     CDS             <1..752
                     /locus_tag="VIC30_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEY7803173.1"
                     /translation="MAEVLGGKVDFLRDIRKNDEFRVLYETRSFEGRPAGSGRVLAIQ
                     YINNGKLVEAMWFAPEGENGGYYDSEGKSLKAAFLRNAIPFTRVSSTFGKRKHPIHKR
                     WKMHNGIDFAAPTGTPIRATGDGVVDYIGSKGGFGKTIILRHPNNIKTLYAHQSRFAK
                     GLKRGDRVSQGETIGFVGSTGWSTGPHLHYEFRVNNKPVDPLGIKMPEAVVLDDNQRE
                     QFLAHATPWRDQLERIAQLQAPDGNVRVASR"
     gene            863..>1688
                     /locus_tag="VIC30_01860"
     CDS             863..>1688
                     /locus_tag="VIC30_01860"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEY7803174.1"
                     /translation="MSTGYYIGLMSGTSVDGVDGVLAHFDAAGKPTLKGTATITMPTG
                     LRAELLALNTPGENELHRSALAANALSDIYAMAVKQLLAQTNVSAAEVVAIGAHGQTV
                     RHRPDLGFTTQLLAPAQLAEQTGIAIIADMRSRDVAAGGQGAPLVPAFHRALFGSTTS
                     RVILNLGGIANVTVLRPEMPVIGFDTGPANLLLDLWCVRHTGCAYDENGQWAAQGQIN
                     HDLLAHLVESEPWFALPAPKSTGRDQFNAEWLEQRLTTFGGLVPVDVQATLAALTAR"
BASE COUNT          390 a          481 c          446 g          371 t
ORIGIN      
        1 aaatggctga agtgctcggt ggcaaagttg atttcctgcg cgatattcgt aaaaacgatg
       61 agtttcgcgt gctctatgaa acgcggagtt ttgaaggtcg tccggccggt tctggtcgcg
      121 ttttggccat ccaatacatc aacaatggca agctcgttga agcgatgtgg tttgcacccg
      181 aaggtgagaa cggtggctac tacgacagcg aaggcaaaag cctgaaagcg gcctttctgc
      241 gtaacgccat tccattcaca cgcgtgagtt ccactttcgg caagcgcaag caccccatcc
      301 acaagcgctg gaaaatgcac aacggcatcg actttgcagc accaactggc accccgattc
      361 gtgccacagg tgatggcgtt gtggactata tcggtagcaa aggcggattc ggtaagacca
      421 tcattttgcg ccaccccaac aacattaaga ccctatacgc tcatcaaagc cgttttgcca
      481 aaggcctaaa gcgcggcgac cgagtctcgc aaggtgaaac cattggtttt gtcggttcga
      541 ctggttggtc aaccggccca cacttgcact acgaattccg tgtcaacaac aaacccgtgg
      601 atccgcttgg catcaagatg cctgaagctg tggtgcttga cgacaatcag cgtgaacagt
      661 tcttggcgca tgcaacacca tggcgtgacc aattagaacg catcgcgcag cttcaagcgc
      721 ctgatggcaa cgtccgggtc gcttcgcgct aagctcgcgc tgagctcccc cttaggcacc
      781 ggcaggcaac gaatcacggc gctatcgact aatttttcac cgtcagttgc ccacatgagt
      841 ctgccaacat gattttgcca acatgagcac tggttactac atcgggctta tgtcaggcac
      901 aagcgttgat ggcgtggacg gtgtgcttgc acactttgat gctgcgggca aaccgacact
      961 aaaaggcaca gccaccatca ccatgccaac tgggctacgt gctgaactgc tggctttgaa
     1021 caccccgggt gagaacgaat tacatcgtag cgccttagct gccaacgctt tgtcagacat
     1081 atatgcaatg gctgttaaac agttgctggc ccagacaaac gtaagcgcag ctgaagtcgt
     1141 ggccatcggt gcccacgggc agaccgttcg gcatcgaccc gaccttggct ttaccaccca
     1201 gcttctggca ccggctcaat tagctgaaca aaccggcatt gccatcattg ctgacatgcg
     1261 cagccgcgat gttgcggcgg gcggccaagg tgcacctttg gtaccggcct ttcatcgggc
     1321 attgtttggc tcgacaacct cgcgtgtcat cctgaaccta ggtggcattg ccaacgtcac
     1381 ggtgctgcgc cccgagatgc ccgtgatcgg gttcgacacg ggtcccgcca acctgttgct
     1441 tgatctttgg tgcgtccgtc acaccggttg cgcctatgac gagaacggac aatgggcagc
     1501 acaaggccaa atcaatcatg atttgctggc acacttggtg gaatcagaac cttggtttgc
     1561 attgcctgca cctaaatcca ccggtcgcga tcaattcaat gcagagtggc ttgaacaacg
     1621 cttaacaacg tttggcggcc tggtacccgt tgacgtgcaa gccacgctgg cagcattgac
     1681 tgctcgca
//
LOCUS       DATBNL010000112         2082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_41270, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000112 DATBNL010000000
VERSION     DATBNL010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41270"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VIC30_01865"
     CDS             complement(<1..501)
                     /locus_tag="VIC30_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014426806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEY7803175.1"
                     /translation="MDALWSPFVEFAFMRRALVASLALGLISGPVGVLLVMRRMSLAG
                     DAIAHAVLPGAAVGYLIAGMSLPILGLGAFVSALAVALLASFVASNTAQKEDASLAAF
                     HLIALALGVTLVSLKGSSVDLMHLLFGSILAVDANALILVTAATTVALVLLALVWRVL
                     LASSFDP"
     gene            complement(501..1277)
                     /locus_tag="VIC30_01870"
     CDS             complement(501..1277)
                     /locus_tag="VIC30_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012747886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803176.1"
                     /translation="MTTAFALSDVTIAYHGHPAVHHISGEFEVGTLTAIVGPNGAGKS
                     TLLSAMAGLKRLSQGHVKRAPALTAPGAVAFLAQLSAINADFPLRVLEVVAMGVWPRA
                     GALGAIKGHEHHKIEHAIEQVGLVGFEDRLVDELSVGQLQRVLFARLIVQDAPAILLD
                     EPFNALDAATTRDLLAIVSGWHAQGRTVIAVLHDLDMVRAHFPRTLLMARELVGWGAT
                     ADVLTPNHLAQANQRSLAWVDSASWCEAPGIEHVHTERAS"
     gene            1276..1413
                     /locus_tag="VIC30_01875"
     CDS             1276..1413
                     /locus_tag="VIC30_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803177.1"
                     /translation="MTPIPSRKGDQPDGEPQWCDNGGYQSEPAANAPEHGMNVTVIGH
                     D"
     gene            1566..1946
                     /locus_tag="VIC30_01880"
     CDS             1566..1946
                     /locus_tag="VIC30_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005671481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEY7803178.1"
                     /translation="MERSTKQRLAIRDALQNADRPLLASEVLALAQQSVPSLGIATVY
                     RTIKALVEQESLQVVELPGENPRFEFEHGHHHHFCCKTCGKVFDVHACPGDFSNMVPP
                     GFKVSDHEVTLYGSCAGCDSNETT"
BASE COUNT          545 a          609 c          534 g          394 t
ORIGIN      
        1 gggatcgaaa ctgcttgcca acaaaacgcg ccacaccaac gctaacaaca caagcgcaac
       61 cgtggtggca gccgtcacga gtatcagcgc attggcgtcg accgccaaaa tgctgccaaa
      121 cagcaaatgc atcaaatcaa cactgctgcc tttaagcgaa accaaggtca cgccaagcgc
      181 caaggcaatc aggtgaaatg ccgctaagct cgcgtcttct ttctgggccg tgttactcgc
      241 cacaaaactg gccaaaagtg caacggctaa cgcactgaca aaggcaccaa gtcccaatat
      301 cggcaacgac attcccgcaa tcaggtagcc caccgccgca ccgggcagca cggcatgggc
      361 aatcgcatca ccggccaggc tcatgcggcg catgaccaac agcacaccga caggaccact
      421 aatcagtcca agcgccaagc tagccaccag cgcgcggcgc atgaatgcaa actcaacaaa
      481 gggagaccaa agtgcgtcca tcagctagct cgctcggtat ggacgtgctc gatgccgggc
      541 gcctcacacc aagaagcact atcgacccag gccaaggagc gctggttggc ttgagccaaa
      601 tggttgggcg tcagcacatc ggcggtcgcc ccccagccca caagctcgcg tgccatcaga
      661 agtgttcgtg gaaaatgggc tcgcaccatg tcaaggtcat gcaacaccgc aatcacggtt
      721 cggccttgcg cgtgccagcc cgatacgatc gcaagtagat cgcgggtggt cgcggcatca
      781 agcgcgttaa agggctcatc aagcaaaatc gccggtgcat cctgcacgat tagccgggca
      841 aacaaaacgc gttgcaattg ccctactgac aactcatcaa ccaaccgatc ctcaaaaccc
      901 acgagcccga cttgctcgat cgcgtgttct attttgtggt gctcatgacc tttgatggca
      961 cctagcgcgc cagcacgtgg ccaaacgccc attgccacga cttcgagcac acgcagcggg
     1021 aaatctgcat tgattgctga gagttgggct aaaaaggcca ccgcacccgg ggcggttagc
     1081 gctggcgccc gtttgacatg gccttgtgac agccgtttta gtccagccat ggccgacaac
     1141 aacgtcgatt tacccgcgcc attagggcca acaatcgcag tcaacgtccc gacctcaaac
     1201 tcaccactga tgtggtgcac agccggatgc ccatggtagg caatcgtgac atcgcttagt
     1261 gcaaaggccg ttgtcatgac acccattccc tcacgcaaag gtgaccagcc agacggcgaa
     1321 ccacaatggt gtgacaatgg cggctaccaa agcgagccgg cggccaatgc cccagagcat
     1381 gggatgaacg tgacggtaat tggacatgat tgaaccggtt cgtgttggtt gttggttgtg
     1441 cgtcaaatcc gattcggata acgcagccga ccgcagccga ccgagaaatt gaattataat
     1501 gataactcat tatcaataag aaaggtacat tggcgtttca cagcgctcgg ggttaaggtt
     1561 ggggcatgga aagaagcaca aaacaacgct tagctatccg cgatgccttg caaaacgccg
     1621 accggccgtt gctggcatca gaggtactgg cattggcgca acaaagcgtg ccatcacttg
     1681 gtattgcgac ggtgtatcgg acaatcaaag cactggttga gcaggaatct ctgcaagttg
     1741 ttgaattgcc tggagaaaac cctcgattcg agttcgaaca tgggcatcat catcacttct
     1801 gctgtaaaac ctgcggcaaa gtttttgatg tccatgcctg cccgggtgac ttttccaata
     1861 tggtgccgcc tggcttcaaa gtcagtgatc atgaggtcac gctgtatggc tcttgtgctg
     1921 gctgcgacag taatgaaacg acttgaaatt gacctacccg cccccatcta catcaagtta
     1981 gcggcacgtc aggcacaaat cggttaaaac ccatgttcaa ggtgccgcaa ccacccacga
     2041 tttagttaca actcaacctt ggtaaaagat gacacaaact cc
//
LOCUS       DATBNL010000113         5578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1440, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000113 DATBNL010000000
VERSION     DATBNL010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5578
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..616)
                     /locus_tag="VIC30_01885"
     CDS             complement(<1..616)
                     /locus_tag="VIC30_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 family protein"
                     /protein_id="HEY7803179.1"
                     /translation="MDNSVLESIKRWPNVPAVFGWLSLTARGQWRLHPDGKAHEGSSG
                     ESIRNPQILTFINRNYASDELGRWYFQNGPQRVYVRLDAAPWILFADDAQRQFNTHTG
                     SVAANVDCVWLDEQGQIYLQTELGPGMIVDRDLPRFLAGAKIQVAQTAQTAQTLEDWW
                     AQGNAATTLLTGLDQHWPACVNPLPVRRLDAATPIDTQLKFVANP"
     gene            complement(606..1910)
                     /locus_tag="VIC30_01890"
     CDS             complement(606..1910)
                     /locus_tag="VIC30_01890"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803180.1"
                     /translation="MNQSTTPGEQTDSTTATPIVQTITFRIFLSFVSGYFLSYALRSV
                     NATIAPLLDADLGLGPGSLGWLSSAYFLSFASVQWYLGTWLDRFGARRTESALLGTAA
                     LGSVIMAASDTLVGLSIGRILIGLGVAACLMAPYSYYRRVFAPQKQAQLAMWMLIGGT
                     TGALVSTQPALMLAEWLGWREIFVLTAGLLALSALAIFLLIPDHDLAVTRAARAATNT
                     TAGAKPPRLFELLRHPTMVRIIPTTIFFSGGFVALQSLWVGPWMTTVLGMSTNETGQA
                     LLYFNAALLVAYLIMSLISPQLEKAGVALARQTTAGFFWFIGCMVLILAWQTPSAWLA
                     WIALAPGIPAVILIQTQTALMFPKAIAGRVLTAFNLVMFSGAFAVQWGVGLLADLFVW
                     IGSSSYEALWQAFVVLLVLQILSLWWFLSRDKPISADTEHGQ"
     gene            complement(2024..2097)
                     /locus_tag="VIC30_01895"
     tRNA            complement(2024..2097)
                     /locus_tag="VIC30_01895"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2063..2065),aa:Cys,seq:gca)
     gene            complement(2136..2211)
                     /locus_tag="VIC30_01900"
     tRNA            complement(2136..2211)
                     /locus_tag="VIC30_01900"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2176..2178),aa:Gly,seq:gcc)
     gene            2339..3355
                     /gene="murB"
                     /locus_tag="VIC30_01905"
     CDS             2339..3355
                     /gene="murB"
                     /locus_tag="VIC30_01905"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF000755.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEY7803181.1"
                     /translation="MSNENTGATHIQQVPNTLALPCVATQAIEYWGQDQLADLQALYD
                     ADDSLAVLGGASNVVLPPKLDRALVLMRNKGIQWIGQTDDHWLIEVAAGESWHDWVCE
                     SLQRGWPGLENLALIPGTVGAAPVQNIGAYGVELKDRIDAVQIWDFKTRCQQWLSVDA
                     CQFGYRDSVFKHEPGKHWLVLAVRFALPRQWQAVLDYPDLQSLRDLPQNPDAQAVFDR
                     VVAVRQAKLPDPAVKPNVGSFFKNPVVSQGQAQTLSKLHPNLVSYPQADGRVKLAAGW
                     LIDQCGYKGRRMGPVAMHDKQALVMVNEGGALVQDVMALAEAIMRDVQARFGVSLQME
                     PSCW"
     gene            complement(3434..4228)
                     /gene="dapB"
                     /locus_tag="VIC30_01910"
     CDS             complement(3434..4228)
                     /gene="dapB"
                     /locus_tag="VIC30_01910"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEY7803182.1"
                     /translation="MKVAIAGASGKMGRMLIETVLNQPDLKLTVALEHAASTALGQDA
                     GASLGVDTQVIITSDLDALRHADCLIDFTRPEGTLTHLQACVKHGVKMVIGTTGFDAA
                     GKAAIAQAAESIGIVFAPNMSVGVNATLKLLEVAAKILNSGYDVEIFEAHHRHKVDAP
                     SGTALKMGEVIAQAWNEPLEDIATWARHGHTGAREDGKIGFSVVRGGDIVGDHTAFFC
                     GTGERIEITHRSSSRATYAQGSLRAARFLGNQDKGLFDMQAVLGLA"
     gene            complement(4267..4830)
                     /gene="bamE"
                     /locus_tag="VIC30_01915"
     CDS             complement(4267..4830)
                     /gene="bamE"
                     /locus_tag="VIC30_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEY7803183.1"
                     /translation="MRTSRLSSRTLLAGSVILVAVSLAGCSSNRWGFPYKVGVQQGNW
                     ITTEQVSLLSEGMTREQVRFALGSPTLTSVIHADRWEYPYFYRAPNGEVDERNFTVFF
                     RNGLLVKWEGDEQPEVQPFQIADDLVDVSKEQREQLELDAERAGAASGIEEIEPGIDF
                     STITNAPPSTDPGALPDEPDTMPQELM"
     gene            4955..5222
                     /locus_tag="VIC30_01920"
                     /pseudo
     CDS             4955..5222
                     /locus_tag="VIC30_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606975.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5260..5397
                     /locus_tag="VIC30_01925"
     CDS             5260..5397
                     /locus_tag="VIC30_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803184.1"
                     /translation="MTLRLGPRFDMAKSVSKSDADLTQAQMMLHALKGGMGSECVGVN
                     R"
BASE COUNT         1299 a         1493 c         1587 g         1199 t
ORIGIN      
        1 gcggattagc cacaaacttt agttgggtat cgattggggt ggcggcatct agccgtcgca
       61 ccggcagggg gttgacgcag gctggccaat gttggtccag gcctgttagc aaagtcgtgg
      121 ctgcattgcc ttgcgcccac cagtcttcaa gggtctgggc ggtctgggcg gtctgggcaa
      181 cctggatctt ggcaccagcc agaaagcgcg gtaaatcgcg atcaacgatc atgcctggtc
      241 ccagttccgt ttgtaaatag atttgaccct gttcatctag ccagacgcaa tcgacattgg
      301 ccgcgactga acctgtgtgc gtattgaatt ggcgttgcgc atcgtcggca aacaagatcc
      361 agggcgcggc atcaaggcgc acgtagacgc gctggggacc attctgaaaa taccaacgcc
      421 caagctcatc actggcgtaa ttgcgattga taaaggtgag gatctgcggg ttacggattg
      481 actcaccact actgccctca tgtgccttgc catctgggtg caggcgccat tgaccgcgcg
      541 ctgtcagcga cagccaaccg aaaaccgcgg gcacgttggg ccagcgtttg atggattcaa
      601 gcacgctatt gtccatgctc agtgtccgcc gaaatcggtt tgtcgcgtga caggaaccac
      661 cacaggctaa ggatctgtag caccagcagc accacaaatg cttgccacaa ggcttcatag
      721 ctactgctgc cgatccacac aaacaggtca gctagcaaac caacacccca ttgcaccgcg
      781 aacgccccgg agaacatcac caggttaaag gcggttaaca cccgcccggc aattgctttg
      841 ggaaacatta gtgcggtttg tgtctgtatc aagatgacag ctgggatgcc aggtgccaag
      901 gcaatccaag ccaaccaggc tgacggtgtt tgccatgcca gtatcagtac catacagccg
      961 atgaaccaga aaaatccagc cgtggtctgg cgtgccaagg ccacaccggc tttctcaagc
     1021 tgtgggctaa tcaagctcat gatgagataa gccaccagca atgcggcatt aaagtaaagc
     1081 aaggcttgac cagtctcgtt ggtgctcata cccaaaacgg tggtcatcca agggccaacc
     1141 cacaaagatt gcagtgcgac aaacccgccc gagaaaaaaa ttgtcgtcgg aatgatgcgc
     1201 accatggtgg ggtggcgcag caactcaaac agcctcggtg gtttggcgcc tgcagttgtg
     1261 ttggtggcag ccctggctgc ccgtgtgact gcaagatcgt ggtctgggat tagtaaaaag
     1321 atggccagtg cggacaaagc caacaaaccg gcggtcagca caaagatttc tcgccaaccc
     1381 aaccattcgg ccagcatgag cgcgggttgt gttgagacca gtgcacccgt ggtgccgcca
     1441 atgagcatcc acatggccaa ttgcgcctgc ttttgaggag caaagacgcg acggtaatac
     1501 gaataaggcg ccattaaaca ggccgccacg ccaagaccaa tcaggatgcg gccaatcgac
     1561 agcccgacca gcgtgtcgct tgcggccatg atgactgagc ccaaagcagc cgtaccgagc
     1621 agcgccgatt cggtgcggcg cgcaccaaac cggtcaagcc acgtgcccaa gtaccactgc
     1681 accgaggcga atgacaggaa ataggccgaa gataaccagc ccagtgagcc aggacctaaa
     1741 cctaagtcgg catctaacag gggggcgatg gtggcgttaa ccgagcgcag cgcatacgac
     1801 aggaaatagc ccgagacaaa actcagaaat atcctgaaag tgatggtttg tacgatgggt
     1861 gtggccgttg tcgagtcagt ttgctcgcca ggagtcgtgc tttgattcat gtcgacactc
     1921 taacgccaaa aacaagttgc catcgttgca tcattgccac taggcagtgt cagtgtgtgc
     1981 ttgattcacg cagggctcgg ataaagcact tggcacctca tgatggaggc gcaacccgga
     2041 atcgaaccga ggtacacgga tttgcaatcc gctgcataac cactctgcca ttgcgccaca
     2101 aactagaagg ggaagcttgc gcttcccctt gaatttggag cgggaaacga gtctcgaact
     2161 cgcgacctca accttggcaa ggttgcgctc taccaactga gctattcccg caagactgct
     2221 tcacaacgta catgtcctgc tacttatggt tttactgctt tcgttgctaa aaacaacgct
     2281 tcgaacagat caagtactat gcgaagagca gaatattagc acaaaaaatg aagctttgat
     2341 gtcaaacgag aataccgggg caacacacat ccagcaggtg cccaatacac tggccttacc
     2401 ctgtgtggcc acgcaggcca tcgagtattg gggacaagac cagctcgccg atttgcaggc
     2461 actctacgac gcggatgaca gccttgcggt gcttggcggt gccagtaacg tggtgttgcc
     2521 gcccaagctt gatcgcgcgc tggtgctcat gcgcaacaaa ggcattcaat ggatcgggca
     2581 aaccgatgat cattggctca ttgaagtcgc cgccggtgag tcttggcatg attgggtgtg
     2641 tgagtcattg cagcgtggct ggcccggcct cgagaacttg gccttgatac ccggcacggt
     2701 aggggccgcc cctgttcaga acattggcgc ctatggcgtt gagctcaaag atcgaattga
     2761 tgctgtgcag atctgggatt ttaagacccg atgccagcag tggttgtctg tcgatgcctg
     2821 ccaatttggc taccgcgaca gcgtgtttaa gcatgaacca ggcaagcact ggctggtctt
     2881 agccgtgcgc tttgcgctgc cgcgccagtg gcaagcggtg ttggactacc cggacttgca
     2941 aagtttgcgt gacttgccac aaaaccctga tgcccaagct gtgtttgacc gggtcgtggc
     3001 agtgcgccaa gccaagctgc cggatccggc ggttaaaccc aatgtcggca gtttttttaa
     3061 gaaccctgtg gtcagtcagg ggcaagccca aacgttgagc aaattgcatc ccaacctggt
     3121 gtcctacccc caagccgatg ggcgtgtgaa gcttgccgca ggctggctca ttgaccaatg
     3181 tggctataaa ggacggcgta tgggtccggt ggccatgcac gataagcaag cgctggtcat
     3241 ggtcaatgag ggtggtgcgt tggttcaaga cgtcatggcg ttggccgagg cgatcatgcg
     3301 cgatgtgcag gcgaggtttg gggtttcgct gcagatggag ccgtcgtgtt ggtgagggta
     3361 cacggatttg caatccgtgt accttgagaa gactttggtc gggctgtgtc aagccgagtt
     3421 atgtcaagcc aagttatgcc aacccaagca cggcttgcat gtcaaacagc cctttgtctt
     3481 gattgcctaa aaagcgtgcg gccctgaggc tgccttgggc ataggtggct cggctactgg
     3541 agcgatgggt gatctcgatg cgttcacccg tgccgcagaa aaaggctgtg tggtcaccaa
     3601 cgatgtcacc accgcgcacc acagagaacc cgatcttgcc gtcttcacgt gcgcccgtgt
     3661 gaccgtggcg cgcccaagtg gcgatgtctt caagtggctc gttccaggcc tgtgcaataa
     3721 cttcacccat tttgagggcg gtgccagatg gtgcatcgac cttgtggcgg tggtgtgctt
     3781 cgaagatttc gacgtcatag ccactgttta aaatcttggc agcaacttct agcagtttca
     3841 aagtggcatt aacacccacg ctcatgtttg gtgcaaacac aatgccgatc gattcagcgg
     3901 cttgggcgat cgcggccttg ccggcggcat cgaacccggt tgtaccgatg accatcttca
     3961 caccatgttt gacgcaagct tgcaggtgcg tcaaggtgcc ttctggtcgg gtgaagtcaa
     4021 tcaggcagtc ggcgtgacgc aaagcgtcaa gatcgctggt aatgatgact tgagtgtcaa
     4081 cgcctaagct cgcaccggcg tcttgcccga gcgcggtgct agctgcatgt tcaagggcga
     4141 ctgtgagctt gaggtcaggc tggtttaaga ccgtttcgat caacatgcga cccattttgc
     4201 cggaggcgcc agcaatcgct acctttattg ggctcgttgt tattggtgca ttcgttattg
     4261 gcgtactcac atcagctcct gcggcatggt gtctggctca tcgggcaggg caccgggatc
     4321 agttgagggg ggcgcattgg tgatggtcga gaaatcaata cccggctcta tctcctcaat
     4381 cccgcttgct gcgccagcac gctcggcatc gagctcaagc tgctcgcgct gttctttact
     4441 gacgtccacc aaatcatcag caatctggaa tggctggacc tcgggttgct cgtcgccttc
     4501 ccatttcacc aataacccgt tacggaaaaa caccgtgaag ttacgttcgt cgacttcacc
     4561 gttgggtgct cggtagaaat aaggatattc ccagcgatcg gcgtggatca cgcttgtgag
     4621 cgtcggggac ccgagtgcga agcgcacctg ctcacgcgtc atgccctctg agagcaacga
     4681 cacttgttct gtggtgatcc agttgccttg ctgcacgccg actttgtaag gaaagcccca
     4741 gcgattggaa gagcagcccg cgaggctgac agccacgaga atgaccgagc cggccagcag
     4801 ggtccgggaa gataaacggg aggtgcgcac atcaaacctc tttgcttgaa tcaagagtaa
     4861 aacgctatca taggacaaag gtcgatagac cgcactgaaa tggaggtttt aactgtttcg
     4921 taattattat tcatatctgt ttatagttat tcaaatgagt aatcattaca ccatcagcga
     4981 cttcgcccga cggataggtc gatcagcttc tacggttcgc cggtgggagc gagacgtcct
     5041 tcgtactagc aactgcctca cagtggtcta ttgccgggtg tcgagtcagg ggcaaaagga
     5101 tgactgacat tcgcaggtgg ctgcaattca acagtattgc cttggcgcta gatagctgtc
     5161 gtcgcaagaa gaaatgaccg aagacctgtg gtgtatctgt ccacgtcttc gcatgccgcc
     5221 gataatgcat gcgaaaatac caaccacaga acgactgaca tgaccttgcg acttggacca
     5281 cggttcgaca tggccaagtc tgtatcaaag tccgatgctg acctgacgca agcgcagatg
     5341 atgctgcatg cactgaaggg tggcatgggg tcagagtgtg taggagttaa ccggtagtac
     5401 tgagcggcag tgcctagaag tgcatcaggc agtgatcact gccagcagtc aaaccacaca
     5461 acgaaaggtt ccaacaagac gtgaaagtca cccgcaccat ttacgccgat gtcccacagg
     5521 gactcgctgc catctgcaag gcggcgggat tcttgcgtgc cgatatctgg cgtcgcta
//
LOCUS       DATBNL010000114         1556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_71155, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000114 DATBNL010000000
VERSION     DATBNL010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71155"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1497
                     /locus_tag="VIC30_01930"
     CDS             <1..1497
                     /locus_tag="VIC30_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803185.1"
                     /translation="IRTFGHRSFGVFAQSIGGGGGSAGSANGALIDLALSQTFSGIGF
                     SPSINVGGAGGAGGSGGAVTYAYTSADSAIVTRGYASYGIALQSIGGGGGIAHEGSTF
                     GLTETVGLSGDVSVTGGVDFGNGLSSANYVASANSASANGSIAFGSADMPSSKVSGIN
                     TDRKSNDYGTYSYEKTSHGNSGSGGAINLGTVSTPMLGSVETHGNDAMAIFGQSVGGG
                     GGLATLGCSNASPTAASHFASACWGNTQVSGAGGQPDDFVGLAGTNGVAITVNSGVQN
                     ANNAGSGAVNVYSNQTITTYGHRSIGLVAQSITGGGGFFSGPNRRIHSVQMPGYHRTD
                     ESPGAVNIVLSSSNVTTYGDGAWGIFSQMVQGGGGFFGDSSEPLAFSVKYSLNSASAE
                     NVFAGPATAPAQGSFESVVNSAYLPSQEIKTSQNNSPTSVTLTNSRIETSGEYAHGIV
                     LQNLGSVGGTWSSSGTNLNMGVTLDGNINGNTPGWQSDVEARQDGDYD"
BASE COUNT          340 a          347 c          468 g          401 t
ORIGIN      
        1 attcgtacat ttggtcatcg atccttcggt gtgtttgcgc aatcaatcgg tggcggcggt
       61 ggtagcgctg gatcagccaa tggggcgctt attgatttgg cgttatcgca gactttctca
      121 ggtattggct ttagcccttc gataaatgtt ggtggtgccg gtggtgccgg cggctctggt
      181 ggagccgtga cttatgccta cacctctgcc gattcagcta ttgtcactcg agggtatgct
      241 tcgtacggta ttgcgttgca atctattggt ggcggaggtg gtatagccca tgagggcagc
      301 acgttcggcc tgaccgaaac agtgggtttg agtggtgacg taagtgtcac tggtggcgtt
      361 gactttggca acggattgag cagtgcaaac tacgtggcgt ctgcgaatag tgcgtcggcc
      421 aatgggtcaa ttgcttttgg cagtgctgac atgcctagca gtaaagtgtc tggcatcaac
      481 acagatcgca agagtaatga ttacggcacg tactcgtatg aaaaaacgtc gcatggaaat
      541 agtggctcgg gcggggcgat caacttgggt accgtttcaa cgccaatgtt gggttcagtc
      601 gagacgcacg gcaatgatgc catggcaata tttggtcaaa gcgtcggagg cggaggtggt
      661 ttggcgactt tgggttgctc aaatgcaagc cccactgctg cgagccactt cgcaagtgct
      721 tgttggggca acacgcaggt ttccggtgct ggtgggcaac cggatgactt tgttgggctt
      781 gctggtacca atggtgtggc gatcactgtc aactcgggcg tgcagaatgc aaacaacgct
      841 gggtcaggtg ccgttaatgt ttacagcaat cagacaatca cgacctatgg ccatcgcagc
      901 ataggcttgg tggcgcaatc gattaccggc ggtggcggat ttttcagtgg acccaatcgt
      961 cgtattcatt ctgtccagat gcctggctat catcgaacag atgagtcgcc aggtgccgtg
     1021 aacattgttc tatcatcatc gaacgtgacg acttatggtg atggtgcctg gggaatattt
     1081 tcccaaatgg ttcaaggcgg tggcgggttt tttggtgact cgtctgagcc gttggcgttt
     1141 agtgtgaaat acagcttaaa ttcggcctca gccgagaacg tctttgctgg tcctgcgacg
     1201 gcaccagcac agggatcttt tgagtcagtt gtaaattctg cttacttgcc ttcacaagag
     1261 atcaagacat cccagaacaa cagccctacg tcagttacgc taacgaacag ccgtattgag
     1321 acttctggcg agtatgcaca cggcattgtg ttacaaaact tgggttcagt cggcggtacc
     1381 tggtcttcaa gcggcacaaa cttgaatatg ggtgtcacgc tggacgggaa catcaatggc
     1441 aatacccccg ggtggcaaag tgacgttgaa gctcgacaag acggtgatta tgactaaagg
     1501 tcaaaattcg ttgggtgttg ttatccagag tgatggagct ggtcccggcg gagcaa
//
LOCUS       DATBNL010000115         3319 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_101074, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000115 DATBNL010000000
VERSION     DATBNL010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101074"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VIC30_01935"
     CDS             <1..398
                     /locus_tag="VIC30_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011829074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FCSD flavin-binding domain-containing protein"
                     /protein_id="HEY7803186.1"
                     /translation="NMNNRWAEVDFLNFESTQAKDVHIVGDSIQVAPRMPKSGHMANQ
                     QAKVAAAAIVSELNDFPINPQPVVTNTCYSFVNDRDVVHVASVHQYDPTEKTFLPVKG
                     AGGLSAEPNRIEGIYAWGWAKNIWNDTVG"
     gene            complement(484..1059)
                     /locus_tag="VIC30_01940"
     CDS             complement(484..1059)
                     /locus_tag="VIC30_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803187.1"
                     /translation="MSSKHAHGPCPPSLLAQVLLVAGVWVLLYVLNDWLFDQVAISAY
                     ASWVFLPAALRMLAVLLCGWVGVVGLFVGSLITGVYTHGLLDPGMLMVLAGLSALSPM
                     VAFLICTRWFGWRSDLRGLSATQLVVLSLLVSLCGAGLHNIHLLAIGAIDSVGQTFVT
                     MFVGDMVGTFVVLYTAKFLIGLVPFNKQAAG"
     gene            complement(1071..1427)
                     /locus_tag="VIC30_01945"
     CDS             complement(1071..1427)
                     /locus_tag="VIC30_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY7803188.1"
                     /translation="MKEQTKYSTIYLRFLNLMQAIRELPSFPHVDPVEERLLNALAAI
                     WHGGGRITVLEAMALPVDVSATTLHRRLKTLRSKGLLALETDATDTRIKYVVPTERTD
                     EYFSALGRCLNEAQQA"
     gene            complement(1491..2993)
                     /locus_tag="VIC30_01950"
     CDS             complement(1491..2993)
                     /locus_tag="VIC30_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017875724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803189.1"
                     /translation="MARLRVQSLSKVYPSVVANDNVSLSVSAGEIHAVLGENGAGKST
                     LMKMIYGVTTPTSGEIFWEDEAVTIASPARARALGIGMVFQHFSLFETLTVAENTALF
                     LPPGQSMAALARQISEVSAHYGLPINPDRYVHDLSVGERQRVEIIRCLLRKPKLLILD
                     EPTSVLTPSAVERLFETLRQIRAEGCAILYISHKLDEILALCDRVTVLRDGQVSGECA
                     TADQTPASLARLMIGHDFEHPVKSAPTIGEVALSIKDVSINAADTSGIGLQRATLELR
                     AGEVLGVAGISGNGQRELCGVLSGELTPDTGEVHGFGRSLTHASVRDRRRLGLCYVPE
                     DRLGTGALGGMSLTDNAVLTAAERESLVSGGFLQFDRAKTFAKRCMTAFRVKAAGPEA
                     QARSLSGGNLQKFIVGREVLQSPAVLICAQPTWGVDVGAAAFIRQALINLAREGCAVL
                     VISEELDELFDVSDRITVMSAGRLSPTQRLTETNREQIGLWMSGLWPKAA"
     gene            3073..>3319
                     /locus_tag="VIC30_01955"
     CDS             3073..>3319
                     /locus_tag="VIC30_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803190.1"
                     /translation="MSLASPSGRLDESTHEQLIQALAHTLKLTHRARAQIYRTHISSI
                     VVCADVAYKLRRPVKLPFADFSTLARRTKDCWREWQLN"
BASE COUNT          839 a          981 c          824 g          675 t
ORIGIN      
        1 tgaatatgaa caaccgctgg gcagaagttg acttcttgaa tttcgagtcc acacaagcca
       61 aggatgtgca cattgttggt gactccattc aggttgcacc acgcatgccc aaatccggtc
      121 acatggccaa ccagcaagcg aaagtggcag ccgctgcgat tgtctcggaa ctcaatgatt
      181 tcccgatcaa tcctcaaccg gtggtgacca acacctgcta cagctttgtg aacgaccgcg
      241 acgtggttca tgtggccagt gtgcaccaat acgatccaac ggaaaaaacc ttcctgcctg
      301 tcaaaggtgc aggtggattg tccgctgagc caaaccgcat tgaaggcatt tatgcttggg
      361 gttgggctaa aaacatctgg aacgacacag tgggttaatc actgagttcc agtaaacaaa
      421 aacgccaccc atgagtggcg tttttgtttg gtactgagtg ctctaacccg ctgcctgttt
      481 acgctaacct gctgcctgtt tattaaacgg cacaagtccg ataagaaact tggcggtgta
      541 taacaccacg aatgtaccga ccatatcacc aacaaacatg gtcacaaatg tctgtccgac
      601 gctgtcaatc gcaccgatgg ccaataggtg tatgttgtgc aagcccgcgc cgcaaagtga
      661 caccaataga ctcaacacca cgagctgtgt cgcacttaag ccacgcaaat ccgagcgcca
      721 accaaaccac cgcgtacata ttaaaaaagc caccatggga gataacgctg acaaaccggc
      781 tagcaccatc agcatgccgg gatcgagcaa tccgtgtgta taaacaccgg ttattaaact
      841 gccaacgaac aaacccacga cccccaccca gccgcacagg agcacggcca acatgcgcaa
      901 agccgccggt aaaaagaccc atgatgcgta agcggatatg gcaacttggt caaacaacca
      961 atcattgagc acatacaaca gcacccaaac gccagccaca agcaaaactt gagccaacag
     1021 cgatggcggg catggcccgt gagcgtgttt tgacgacatg ggtcgagacc tcaggcttgc
     1081 tgggcctcgt ttaaacaccg cccaagcgca ctgaaatact catcggtgcg ctctgtcggg
     1141 accacatact tgatgcgcgt atcggtggcg tcggtttcaa gtgccaacag ccccttggat
     1201 cgcaaggttt taaggcgtct gtgtaacgtc gtcgctgaga cgtccactgg caaggccatg
     1261 gcctcaagta ccgtgatgcg gccaccgcca tgccaaatcg cagccagcgc attcaataag
     1321 cgctcttcga ccgggtcgac atgtggaaac gaaggcaact cgcgaatggc ctgcatgagg
     1381 tttaagaatc gcaagtaaat cgtggagtat ttggtttgct ctttcatgcg ctgatcataa
     1441 tccaaaaggt aaacatcgtt cttgttcagg tccttgcccc atttgacaac ctatgctgcc
     1501 tttggccaaa gcccactcat ccatagacca atttgctctc gattggtttc agtcagtcgc
     1561 tgagttggcg agagtctgcc cgctgacatg actgtaatcc gatcagagac atcaaacaac
     1621 tcatcaagct cctcagaaat caccaaaacc gcgcatccct cgcgcgcgag gttgatcaat
     1681 gcttgtcgaa taaaggccgc cgcccccacg tccacacccc aggtgggttg ggcgcaaatt
     1741 agcaccgccg gggactgcaa aacttcacgg ccaacaatga atttttgcag gttgccgcca
     1801 gacaaagacc gagcctgtgc ctcgggccct gccgccttga cccgaaatgc cgtcatgcat
     1861 cgcttggcga aagtctttgc ccgatcgaac tgtaaaaatc cgcctgaaac caaagactcg
     1921 cgctcggcag cggtcaacac ggcgttgtcc gtcaaactca tgccaccgag tgcacccgta
     1981 ccgagacgat cttcaggtac gtaacaaagc cctaagcggc ggcgatcacg cacactcgcg
     2041 tgcgtaagcg agcgtccaaa cccgtggact tctccggtat caggcgtgag ctccccgctt
     2101 aatacgccac acaattcacg ttgaccgttg ccggaaatcc ctgccacacc aagcacctcg
     2161 ccggcgcgca attcgagtgt ggcacgctgc aaacctatgc cactggtgtc agccgcgtta
     2221 atcgacacat ctttgatgct taacgccacc tcaccgatcg tgggtgcgga cttaaccgga
     2281 tgctcaaagt cgtggccaat catgagccgc gctagcgagg ccggtgtctg atcggccgtg
     2341 gcgcactcac cgctgacttg cccgtcacgc agcaccgtga cacgatcaca cagtgccaga
     2401 atctcgtcta atttgtggct gatatacaga atcgcacaac cttcagcgcg gatttgtcga
     2461 agcgtctcaa acagccgttc gacggccgac ggggtgagca ccgaggtcgg ctcatcaaga
     2521 attagcagtt ttggcttacg caacagacaa cgaatgattt ccacgcgttg gcgctcaccc
     2581 actgacaaat cgtgcacata ccgatcggga ttaattggca aaccgtaatg cgccgagact
     2641 tcgctgatct ggcgcgcgag tgcggccatt gactgcccgg gcggcaaaaa caacgccgtg
     2701 ttctctgcca cggttaaagt ttcaaacaaa gagaagtgct gaaacaccat accgatgccc
     2761 agagcccggg cgcgcgccgg gctcgcaatg gtgacagcct catcttccca gaaaatctca
     2821 ccgctcgtgg gtgtggtcac gccgtagatc attttcatga gtgtggattt gccggcacca
     2881 ttctcaccga gcaccgcatg gatttctccg gcacttacgc tcaggctcac gttgtcgttg
     2941 gcaaccaccg acgggtagac tttcgagagt gactgtacgc gcaagcgggc catggcagaa
     3001 gcacttcatg aataatgagg acagaaccga aattatcccc tactttttag tgccgcgagc
     3061 gcaaggactg acatgtcgct agcaagtcca tctggcagac tcgatgagtc aacgcacgag
     3121 caactgattc aggcgctcgc ccacaccctg aagcttacgc atcgcgcacg agcgcagata
     3181 tatcgcaccc atatctcgtc gattgtcgtg tgcgccgatg tcgcctacaa actcagacgg
     3241 cccgttaagt tgccctttgc tgatttctca acgctggcac gccgcaccaa ggactgttgg
     3301 cgtgaatggc aactgaaca
//
LOCUS       DATBNL010000116         2441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1467, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000116 DATBNL010000000
VERSION     DATBNL010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1467"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..747
                     /locus_tag="VIC30_01960"
     CDS             121..747
                     /locus_tag="VIC30_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEY7803191.1"
                     /translation="MSGCSCQPPAFDGTSSVYKRVLLVIIAINAGMFVVEILAGAFAG
                     SQALKADALDFLGDALTYGISLWAISKSLATRAYAALFKGASLAAMGLWVFGSTVYEV
                     FVLAVPKASVMGVVGFLALAANVISVLLLMKYRDGDANVRSVWLCSRNDAIGNVAVMA
                     AAGAVYFTASAWPDLIVAGAMAGLFLWSSVQIVKQAMAELREQSPKAA"
     gene            complement(762..1496)
                     /locus_tag="VIC30_01965"
     CDS             complement(762..1496)
                     /locus_tag="VIC30_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011493310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803192.1"
                     /translation="MIETAKPICLIVGAGTGLGAGLTTTFAQAGFKVVMARRDSQAVT
                     EQMAGFVKKGLDVHGLTVDACEAESVNGLFADVIDRFGVPDVVVFNAGRNQRASILET
                     SVEAFEGLWRANTLAGFLVGQAAARAMVPRGSGSVLFTGATASLRGGNGFAAFASAKS
                     GLRAMAQSMARELGPQGIHVAHVVIDGGIDSPRVRANQPQRVQDAGPDGLLQPAHIAE
                     QYLHLHRQSRDCWAFEVDLRPWSERW"
     gene            complement(1551..1907)
                     /locus_tag="VIC30_01970"
     CDS             complement(1551..1907)
                     /locus_tag="VIC30_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019428229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HEY7803193.1"
                     /translation="MRGRIKRKQALQMGAFPRQLANQHTLCVLCERPVPSSQVDAHHL
                     VPKSKGGTQTVIMHRMCHRQVHALLTETELERHYCTVEQLRAHEALARFVQWVKDKPD
                     DFMERTRKSRRLRPGR"
     gene            complement(1984..>2441)
                     /locus_tag="VIC30_01975"
     CDS             complement(1984..>2441)
                     /locus_tag="VIC30_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008651486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY7803194.1"
                     /translation="RAGPSRYFEDFELGEVFYIPSRTLTDALFAAFQLASGDNDPIHY
                     DVNYCRARGYPHMLAHGMQVMIQTAAGAGTFPQQVADSLLGMVELSGKILKPVYAGET
                     LYPRLTVSRLKPQNTTGLLTLAAEVWNQDSVQVFAGEHTYLIRKRPVQD"
BASE COUNT          532 a          701 c          647 g          561 t
ORIGIN      
        1 cttagcttca ctagcggtgc ttatcttgct gtcttattgt cttgttgtcc tatttgttaa
       61 atatacgcac cggcgatacc attgcaagag atccgacaaa aattgatgga tttgtgaaaa
      121 atgagcggtt gttcttgcca acctcctgcg tttgacggca cctcgtctgt ctataagcgc
      181 gtcttactcg tcatcattgc gatcaatgcg ggtatgttcg tggtggaaat cctcgcgggt
      241 gcgttcgcgg gatcacaagc cttgaaagcc gatgcgctcg atttcttggg agacgcactg
      301 acctacggga tcagtctgtg ggccatcagc aaaagccttg ccacgcgcgc ctatgcggca
      361 ttgttcaaag gcgcgagcct tgcggccatg gggctatggg tgtttggctc aacggtctat
      421 gaggtatttg tgctggctgt gcccaaagca tctgtgatgg gtgtggtggg ctttttagca
      481 cttgccgcca acgtcatcag cgtgttgctg ctcatgaaat atcgcgacgg tgatgccaac
      541 gtgcgctcgg tctggctatg tagccgcaac gatgccattg gcaatgtggc ggtaatggct
      601 gctgcgggcg cggtttattt cactgcaagc gcttggcctg acttgattgt cgccggtgcc
      661 atggctggtt tgtttctgtg gtcatcggta caaatcgtca agcaggccat ggcggagtta
      721 cgcgagcagt cacccaaggc cgcgtgacct gtctgattgg ctcaccagcg ctcggaccac
      781 ggtcgcaggt ctacctcaaa ggcccagcag tctcgagact gacgatgcag gtgcaagtat
      841 tgctcggcaa tatgcgctgg ctgcaaaagc ccatccgggc cggcatcttg cacacgctga
      901 ggctgattcg cgcgcacgcg cggtgagtcg atgccaccat caatgaccac atgcgccacg
      961 tgaatgcctt gtgggcctaa ctcgcgcgcc atgctttgcg ccatggcgcg caatccactt
     1021 ttagcgctgg cgaacgctgc aaatccattg cctccgcgca aactggccgt ggcacccgtg
     1081 aacaaaaccg aacccgagcc acgtgggacc atcgccctgg ctgctgcctg tcccactaaa
     1141 aatcccgcca gcgtgttggc gcgccataac ccctcaaacg cctcgacact ggtctcaaga
     1201 atactggcac gctggttgcg tcctgcatta aaaaccacca cgtcaggcac accaaaccga
     1261 tcgatcacat cggcaaacaa accgttaact gactcagctt cacaggcgtc gacagttaac
     1321 ccgtgcacat ccaacccttt tttgacaaat cccgccatct gctcagtgac tgcctgagaa
     1381 tcccggcgtg ccatgacaac cttaaaacca gcttgcgcaa aggtcgttgt cagaccggct
     1441 cccaaacctg tacccgcccc cacaatgaga caaatgggtt tcgctgtttc tatcattttc
     1501 gtcccctcgg tgatttatgt cggtgctagc tcattgaacg gtagcaccaa ctagcggcca
     1561 gggcgaaggc gccgactttt gcgtgtgcgt tccatgaagt catccggctt atctttaacc
     1621 cactgcacaa agcgggccag cgcctcatgc gcacgcaact gttcaacagt acagtagtgg
     1681 cgctcaagct ctgtctcggt caacaacgcg tggacctgac ggtggcacat gcgatgcatg
     1741 atcacggttt gggtgccacc tttagatttc ggcacgagat gatgggcatc gacttgcgaa
     1801 ctcggcaccg gccgctcgca aagcacgcac agcgtatgct gattggccaa ctgcctcggg
     1861 aaagcgccca tttgtagggc ttgtttgcgt ttaatacgac cgcgcatgtc ttgttctcag
     1921 gacaaatgac tcacagcacc caagcaaaag acaagcaaat gacgagtatt tagttacacg
     1981 ccgctagtct tgaaccggtc gtttgcgaat caaatacgta tgttcaccgg caaatacttg
     2041 cacactgtcc tgattccaga cctcggcagc cagcgttagc agccccgtgg tgttctgagg
     2101 tttcaggcgt gagaccgtca ggcgaggata caaggtctca ccggcataaa cgggtttgag
     2161 tattttgcca ctcaactcca ccatgcccaa caaagagtct gctacttgct ggggaaacgt
     2221 cccagctcct gcagccgttt gaatcatgac ctgcatgccg tgtgccagca tgtgtggata
     2281 gccacgcgcc cggcagtaat tcacgtcgta gtgaatcggg tcgttgtcac cagacgccag
     2341 ctgaaacgcg gcaaacagtg cgtcggtcaa ggtgcgagaa ggtatgtaga aaacctcccc
     2401 aagctcaaag tcttcaaagt accgacttgg ccctgctcgc a
//
LOCUS       DATBNL010000117         2399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161085, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000117 DATBNL010000000
VERSION     DATBNL010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161085"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..663)
                     /locus_tag="VIC30_01980"
     CDS             complement(145..663)
                     /locus_tag="VIC30_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014619294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY7803195.1"
                     /translation="MNREAALLVERLGLTPHPEGGYYRENYRAPARVHSGTLGSARSA
                     FTSIHFLLAGDHYSAWHRVKSDESWFFHTGGDLAIYSLVPDASNPSAGIKLQTQTIGA
                     SCGCFELTVPANRWFAAKPVEPDSHALVSCVVAPGFEFEDFELAKHEDLLEAGCEQLA
                     DWPLVQSLLLRD"
     gene            838..1542
                     /locus_tag="VIC30_01985"
     CDS             838..1542
                     /locus_tag="VIC30_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017450361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019172 - glyoxalase III activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEY7803196.1"
                     /translation="MKPQILMIITSNAEMGSSDRQTGFWAEEVAVPYYELVDAGAEVI
                     LASPKGGAVPVDPSSVKPAGENDAIVERYLADKELQAQLSATKKTADIVDMPFAFDAI
                     FFPGGHGTMWDLPTDAGVTTLVETAFANNKFVASVCHGAAGLVTAKRADGESVVKDLR
                     VSAFTDEEEKAVGLEAVVPFMLETRLRELGCQFEGAANWVPFAVRDGNLITGQNPQSS
                     DLVAQSLLDALGISKH"
     gene            complement(1635..2129)
                     /locus_tag="VIC30_01990"
     CDS             complement(1635..2129)
                     /locus_tag="VIC30_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010465910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HEY7803197.1"
                     /translation="MSDFLHPKLQAVEVLVPYRLRTTWSTGEALEVDLESVLRSIPAL
                     GNLLDPRVFRKAHLADWGHGIEWFDAELGADNVCAWGKEQAGEVSHPMFDVWMHRNGL
                     SLSTAADALGVSRRMVSYYRTAQKPIPRSIWLACLGWEATKPFSKALPRGLPTAREYA
                     LAHA"
BASE COUNT          619 a          667 c          616 g          497 t
ORIGIN      
        1 ctgaacggta aataaacagg tctgtggata agtgcacgcc agccatcccc catgagcaat
       61 gcgtgacatc aaaccacaag ttcggcaata cgtaggcagc tagccagttg cgcatactag
      121 agcaagttgg tggatactag accgtcaatc tcgcagaagc aaggattgaa ccagaggcca
      181 gtccgccagt tgctcgcagc ccgcctcgag caaatcctcg tgcttggcca gttcaaagtc
      241 ctcaaactca aaacccggtg caaccacgca actgaccagc gcgtgtgaat cgggttcaac
      301 gggcttggca gcaaaccagc gattggccgg cacagtcaac tcaaagcagc cacaagacgc
      361 accgatggtt tgggtctgaa gcttaatccc tgctgaagga ttacttgcat caggtaccaa
      421 cgaatagatc gccagatcgc cacccgtgtg aaaaaaccag ctctcatcgg atttcacccg
      481 gtgccaggct gagtaatggt cacccgccaa cagaaaatga atgctagtaa aagcactgcg
      541 cgcgctgccg agcgtgcccg aatgtacgcg ggcaggcgca cgatagttct cgcggtagta
      601 cccgccttca ggatggggag tgagcccaag gcgttctaca agcaaagcag cttctcggtt
      661 catggggaaa actccaaggt agcaccatag atggcaaaag aaacacaatg acactacgca
      721 acacagcaca acacaacaca accgcctgca ctttcgctgg cattgttaac agcggtcatt
      781 cacgttcgat tccgatgggt gaactaccat ggtgactcat ctatagacag gaatgttatg
      841 aaaccacaaa ttttaatgat catcacctcc aatgccgaaa tgggcagcag cgacaggcaa
      901 acgggctttt gggctgaaga ggtagccgta ccgtactacg aactcgtgga tgcaggtgca
      961 gaggtgatct tggcgtcgcc caaaggcggt gctgtcccgg tcgatccatc gagcgttaaa
     1021 ccggctggtg agaacgatgc gattgtggaa cgctatctag ccgacaaaga actgcaagca
     1081 cagcttagtg ccactaaaaa gacggccgac atcgttgata tgccgtttgc atttgatgca
     1141 attttctttc ctggcggtca tggcacgatg tgggacttgc caactgacgc tggtgtgacc
     1201 actttggttg aaaccgcatt tgccaacaac aagtttgtgg cgtctgtctg tcacggggct
     1261 gccggcttgg ttacggccaa acgcgcagac ggcgaatccg tggtcaagga tttgcgtgtg
     1321 agcgcgttta ccgacgaaga agaaaaagcc gtgggcctcg aagcggttgt gccttttatg
     1381 cttgagaccc gcctacgtga attgggttgt cagtttgaag gtgccgctaa ctgggtgcca
     1441 tttgccgttc gtgatggcaa tctcatcacc ggacaaaacc ctcagtcgtc cgatctggtg
     1501 gcgcaatcat tgctcgatgc actaggcatc tcgaagcatt aaagaccgct tatacccgtg
     1561 tccgcggcag caaattcaac aacacaaaag ttcgcacgct gacacgggca cccaactcaa
     1621 tggcagactt aagtttaagc atgcgccagc gcatattctc tggcggtagg tagaccgcgc
     1681 ggtagggcct tggagaatgg ctttgttgct tcccaaccca aacacgccag ccagattgag
     1741 cgcgggatgg gcttctgtgc ggtgcgatag taactcacca tgcgacgact gacccctagg
     1801 gcatcggccg ccgtgctcag tgacagcccg ttgcgatgca tccagacatc aaacatcgga
     1861 tggctgacct caccagcttg ctccttgccc caagcgcaaa cattgtctgc ccctagttcg
     1921 gcatcaaacc actcgatgcc atgcccccag tcagctaggt gcgccttgcg aaagacacgg
     1981 ggatccagca agttgcccaa tgcaggaata ctgcgcaaca ccgattcaag atcaacctct
     2041 aacgcttcgc ccgtgctcca ggtcgttcgc agtcgatacg gcactaaaac ctcaacagcc
     2101 tgcaacttag gatggagaaa atcactcatg ggttcagcct ccgccattgt tcgtgcagcc
     2161 acgcacggtt ggattcgatc cacaacaatt cttcgcgaat ttcgcgtgca gcgattctgc
     2221 caaccaaatc taagctatcg agctcaaccg taagttcacg accatcacgc aaaagaacat
     2281 gtatgtgggc aagcaaatcg tcaccggctt acatcactac gtcactacgc gcggtgccga
     2341 gaatctgttc aggatcagca tgatttgacg gtagtgcaac tactgcacta catcaatta
//
LOCUS       DATBNL010000118         4213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161087, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000118 DATBNL010000000
VERSION     DATBNL010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4213
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161087"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            89..1618
                     /locus_tag="VIC30_01995"
     CDS             89..1618
                     /locus_tag="VIC30_01995"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit D family
                     protein"
                     /protein_id="HEY7803198.1"
                     /translation="MTESTLILTALAIPLVGALVIALTGASRNVRDSLMVASALLVFL
                     TVLSILPLVLDGQQPSVRLFEILPGLPLAFAVEPLGMLFGLIASGLWVITSVYGIGYM
                     RGANEKNQTRFFACFSIAIFAALGVAFAENMFTLFIFYEVLSLSTYPLVAHKGNEEAK
                     RGARIYLGLLLGTSIGLMLPAMLVTWFMAGTLDFVPGGILQDNVSRGVGAVLLILYMY
                     GIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFTVLKVSIYLFGLEYLQSLW
                     STDLIMWVAAFTLLAASVVAIQKTNLKARLAYSTISQLSYIVLGAMLASELAFIGGSM
                     NIAMHAFGKITLFFCAGAIYVAAHKSEIPEMDGLGRKMPLTFFAFLLGALSVIGAPPL
                     GGFWSKWYLLLGAVQAHHAIMIAVLLVSTLLNMGYLLPPVIRAFLLKPPQTDSHDDHQ
                     DGHHNDHSTSLRRFGLAEAPLFCLIPLLITATGTVLLFFYASSVQGLIEMIFTQGVNH
                     G"
     gene            1611..1925
                     /locus_tag="VIC30_02000"
     CDS             1611..1925
                     /locus_tag="VIC30_02000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803199.1"
                     /translation="MVDQLSRLLQWMVGHGTLLKRIMLVIMALLVIANFIFPAGYDRF
                     FWESIPGAGAVYGLVSCVVLVAVAKFLGYKLLYRPEDYYDNETKPNKLIGDPKAREVS
                     DD"
     gene            1918..3636
                     /locus_tag="VIC30_02005"
     CDS             1918..3636
                     /locus_tag="VIC30_02005"
                     /inference="COORDINATES: protein motif:HMM:NF009310.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit D"
                     /protein_id="HEY7803200.1"
                     /translation="MTETSAVVSQSGFWLHPGIFLLLGALVIPFLKGTVQQGYRVALA
                     LAFIFVVFQTQPGIHGQFTIGDMTFVTGRADKLALVFAYVFSLITLIATIYSLHVKDN
                     VQHVTALIYASAAVGVTFAGDLLTLYVFWEMMMLASVWLIWRRQRATSYVSGYRYLMV
                     HAVSGVTLLAGVVLFYSATGTLAFDAMKADNLAVYLILIGFLINAAVPPLHAWLPDAY
                     PEATITGAIFLSALTTKTAVYTLLRGFPGTEFLIWMGVVMALWGVIYAALVNDIRRLL
                     AYHIISQVGYMVAGVGMGTAMAINGATAHAFTHILYKAVLFMGAGAVVYMTGRSKVTE
                     LGGLYKYMPVTFLLYMVGAASISSFPLFSGFVSKTMILEAAALDRMAIAWLLLTMASV
                     GTFISTGLKLPYFVFMGQDSGLKPKEAPWNMILAMGIAAFFCFFIGVYPTWLYNFLPE
                     QPVSYNAFSLGHLFWELQLLLFTGLGFFLMLKYLAGSRKTSVDTDWVYRKAAPVLVYK
                     VAELVRQGWRAFINASLSLLKGLWESLAQTYGSNGPMGQTWSIGLTTVWVVFFVALYG
                     LYILLF"
     gene            3647..4174
                     /locus_tag="VIC30_02010"
     CDS             3647..4174
                     /locus_tag="VIC30_02010"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: protein motif:HMM:NF016040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050385 - ureidoglycolate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HEY7803201.1"
                     /translation="MHIEPLSRSAFAKYGDVIGGHMPTEGVSINQGTTHKFATEALAL
                     TAQDSDEDGGVSQSGQGQAFLYRASAQPLPLTLHELECHQLGSQTFVPLAGVSFVVVV
                     ALSDAAGQSPNLQTLRAFWVDGNHAITLRAGTWPHGLIAMEDGDFVVIERVAKQVDCQ
                     TIKLEPAIELKAYEL"
BASE COUNT          809 a         1092 c         1163 g         1149 t
ORIGIN      
        1 tggctgccaa catctggttt ggcattgacc cgtcattgcc gctaaaggtc gcgggcatgg
       61 agatcggata tgtgttgggg gttagccaat gactgagagc actttgattc tcactgcctt
      121 ggccattcca ctggttggcg ctttggtgat tgctttaaca ggtgccagcc gcaacgtgcg
      181 cgacagccta atggtggcct cagcgttact ggtgtttcta acggttctca gtatcttgcc
      241 cttggtactt gatggccaac agccctcggt gcgcttattt gaaatcttgc caggtctgcc
      301 gctagctttt gccgttgaac cgcttggcat gctgtttggt ttaattgcgt cagggctgtg
      361 ggtcatcacg tcggtctacg gcattggtta catgcgaggt gccaacgaga agaaccagac
      421 aaggtttttt gcgtgtttct caatcgccat ttttgcggca ctcggcgtgg cgtttgccga
      481 gaacatgttt acgctcttta tcttctatga ggtcttgtcg ctatcgacct atcctctggt
      541 ggcacacaaa ggcaatgaag aggctaagcg tggtgctcgt atctatctgg gtttgttgtt
      601 gggcacctcg attggcctaa tgttgccagc gatgctagtg acctggttca tggccggtac
      661 actggacttc gtacctggtg gcatcttgca agacaatgtc agtcgtggtg tcggtgcggt
      721 gctgctgatt ctctacatgt atggcattgg caaggcggcg ctcatgccgt ttcaccgatg
      781 gttacccgcg gccatggttg cccccacccc ggtcagtgcc ttgctgcacg ctgtggccgt
      841 ggttaaggct ggtgtgttca cggtgcttaa ggtcagcatt tacctctttg gccttgagta
      901 cctgcaaagc ctgtggagca ctgacctcat catgtgggtg gccgccttca ccctgctggc
      961 cgcttccgtt gtcgccatac aaaagaccaa cctcaaggca cgcctggcct actccacgat
     1021 cagtcagttg tcctatatcg tgctcggtgc catgctagcc agtgaactgg cttttattgg
     1081 tggcagcatg aacattgcca tgcacgcctt tggcaagatc acgctgtttt tctgtgcggg
     1141 tgctatttac gtggctgccc acaaaagcga gatccccgag atggacggct tgggacgcaa
     1201 aatgccgctg accttctttg cattcctgct cggagcgttg tcagtcattg gtgcgccacc
     1261 gcttggcggc ttctggagca aatggtatct gttgctcggt gccgttcaag cacaccacgc
     1321 catcatgatc gcggtgttgc ttgtgagtac gctcttgaat atgggctatt tattgccgcc
     1381 agtgatccgt gcgtttttgt taaagccacc tcaaaccgac agtcatgatg atcatcaaga
     1441 cggccatcac aatgaccaca gcaccagttt gcgtcggttc ggtttggctg aggcaccact
     1501 gttttgtctg attccgctat tgatcacagc caccggtacg gttttgctgt tcttctacgc
     1561 atcatcggtg caggggttga ttgagatgat attcacgcaa ggggtcaatc atggttgatc
     1621 agttatctcg cctattgcag tggatggttg gccacggcac attgctcaaa cgcatcatgc
     1681 tcgtcatcat ggcattgctg gtgatcgcca actttatctt tccggctggc tacgaccgct
     1741 ttttctggga atcaataccg ggtgctggtg ccgtctacgg gctggtgtca tgcgtggttc
     1801 tggtcgctgt agccaagttc cttggttaca aactgctgta tcgcccagaa gactactacg
     1861 acaacgaaac caagcccaac aaactgatcg gtgaccccaa agcgcgcgag gtgtccgatg
     1921 actgagacat cagccgtggt cagccagagc gggttttggt tacatccagg cattttcttg
     1981 ttgcttggtg cattggttat cccgtttctg aaaggaacag tccagcaagg ctatcgggtt
     2041 gccttggcgc tggcgtttat ttttgtggtg tttcagaccc aaccgggcat tcacggtcag
     2101 ttcacgatcg gtgatatgac gtttgtcacc gggcgagcag acaaactggc gttggtgttt
     2161 gcctatgtgt ttagcctgat caccttgatt gccaccatct actcgttgca cgtcaaagac
     2221 aatgtgcaac acgtcacggc actcatctat gcatcagcgg ccgttggcgt gacctttgct
     2281 ggtgatttgc tcacgttgta tgtgttctgg gaaatgatga tgctggcctc ggtctggctc
     2341 atttggcgac gccaacgtgc aacgtcttat gtctcgggct accgctacct gatggtgcat
     2401 gccgtcagtg gcgtgacctt gttggctggt gtggtgttgt tctacagcgc cacaggcact
     2461 ttggcctttg acgccatgaa ggccgacaat ttggcagtct atttgatcct catcgggttt
     2521 ttgatcaacg ccgcggtgcc accgttacac gcttggctgc ccgatgctta tccagaagcc
     2581 accattacag gcgcgatttt cttaagcgca ctcaccacaa aaaccgcggt ctacacgctc
     2641 ttgcgtggct ttcccggcac cgagttctta atctggatgg gtgtggtgat ggccttatgg
     2701 ggcgtcattt atgccgcact ggttaatgac atccgcaggc ttttggccta tcacatcatc
     2761 agtcaggtgg gctacatggt ggccggtgtt ggcatgggca ctgccatggc catcaacggc
     2821 gccaccgccc acgcgtttac ccacattctg tacaaagccg tgctcttcat gggtgccggt
     2881 gcggtggtgt acatgacggg cagaagcaaa gtaactgaac tcggtgggct gtataaatac
     2941 atgcctgtga ccttcttact ctacatggtg ggtgctgctt ccatttcatc attcccactc
     3001 tttagtggtt ttgtgagcaa gaccatgatt ttggaagccg cagcgctcga ccgcatggcc
     3061 attgcatggt tgttgttaac catggcttcg gtgggtacgt ttattagtac gggcttaaaa
     3121 ctaccctact ttgtgttcat ggggcaagac tctgggctta aacctaaaga ggcaccctgg
     3181 aacatgattc tagccatggg tattgcggca tttttctgct tcttcatcgg cgtctatccg
     3241 acctggttgt acaacttctt gccagagcaa cccgtgagct ataacgcctt ctccttgggc
     3301 cacctgttct gggaactgca gttgctactc tttactggtc tgggcttttt cttgatgctc
     3361 aaatacttgg ctgggtcccg taaaaccagc gtggacaccg actgggttta ccgcaaggct
     3421 gcgccagttc tggtctacaa agttgctgaa ctggtgcgcc aaggctggcg ggcgttcatc
     3481 aatgcgagct tgtcgctgct caaaggcttg tgggagtcac tggcgcagac ctatggcagc
     3541 aatggtccga tgggtcagac atggagcatt ggtctgacca cggtctgggt ggtgttcttt
     3601 gtggcgctct acggcctgta tattctgctg ttctaaagga tgacgcttgc atattgagcc
     3661 attgtcgcga tcggcctttg ccaaatacgg cgatgtcatc ggtgggcaca tgcccaccga
     3721 aggcgtgtcg attaatcagg gtacaaccca caagttcgcg accgaggccc tggcattaac
     3781 tgcacaagat agtgatgaag atggcggtgt aagccaaagc ggtcagggac aggcgttttt
     3841 gtatcgcgcg agcgcacagc ccctgccatt aacgttgcac gaacttgagt gtcaccaact
     3901 gggcagccaa acctttgtgc cgctagcggg tgtgagtttc gttgtcgttg tggcgctgtc
     3961 tgacgctgcg ggccaatcac ccaacctaca aacgctacgg gcattttggg tcgatggcaa
     4021 tcacgccatc acattacgtg ccggcacgtg gccccacggc ctcattgcca tggaagatgg
     4081 tgactttgtg gtgattgagc gcgtggccaa acaggttgac tgccagacca taaaactcga
     4141 acctgcgatt gagcttaaag cttacgagct ctgacaataa gggcagaccg ccccattcat
     4201 aggatgcccg att
//
LOCUS       DATBNL010000119         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_41386, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000119 DATBNL010000000
VERSION     DATBNL010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41386"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1457
                     /locus_tag="VIC30_02015"
     CDS             <1..1457
                     /locus_tag="VIC30_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY7803202.1"
                     /translation="PWQLLADKSEIREKWQNQVRYLLIDEYQDTNACQYALVRHLTGV
                     RAMFTAVGDDDQAIYGWRGATMQNLARLQEDYPSLALIKLEQNYRSTQTILAAANHLI
                     TRNPKLFQKQLWSELGTGEAISVTRMDGELEQAQAVAMRVSAARTEKRAAWRDFAVLY
                     RSNQQARAMEQALRDLRIPYTVSGGQSFFDKAEVRDILAYLRLLANDQDDPAFIRAAT
                     TPRRGIGQASLQLLGEYAAKRHLGMLAAASEQGLQSLMQPKQLQALQAFVGFMQRFAM
                     RASRPAKQEPVDALLDELMAAISYENYLYDVSTDDRAARSRWQNVIELLDWLKTRATE
                     TGWGLSELVQHVALVTMLERQGEQSNDSVTLSTLHAAKGLEFAHVYLIGIEEGLLPHL
                     GRESDDASLVGSPERIEEERRLMYVGITRAQRSLHLTWCARRRRGGQEHACELSRFVA
                     EMGLEQQPELVDPGASLTPKGRLDMLKAMLTKPT"
     gene            complement(1576..1980)
                     /locus_tag="VIC30_02020"
                     /pseudo
     CDS             complement(1576..1980)
                     /locus_tag="VIC30_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937715.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ADP/ATP-dependent (S)-NAD(P)H-hydrate
                     dehydratase"
BASE COUNT          450 a          505 c          595 g          447 t
ORIGIN      
        1 ggccctggca gctgttggca gacaagtcag agatccggga gaaatggcaa aaccaggtgc
       61 gctacttgct cattgacgag tatcaggaca ccaatgcttg ccagtatgca ctagtcaggc
      121 atttgacggg tgtgcgtgcc atgtttactg ctgtgggcga cgacgaccaa gcaatctatg
      181 gttggcgtgg cgccaccatg cagaatttgg cgcgcttgca agaggactat ccaagcctag
      241 cccttattaa gcttgaacaa aactatcggt ctacacaaac gattttggcg gcagccaatc
      301 acttgatcac ccgcaacccc aagctttttc agaagcaact gtggtccgag cttggtacgg
      361 gtgaggctat ctctgtgact cgcatggatg gtgagctcga acaggcacaa gcggttgcca
      421 tgcgcgtgtc agcagcccga acagaaaaac gcgctgcctg gcgtgacttt gcggtgctgt
      481 atcgcagcaa tcagcaggcc agagccatgg agcaggcctt acgtgatctg cgcattccct
      541 atacggtctc gggtggccag agtttttttg ataaggccga ggtacgcgat attctggcgt
      601 atttgcgcct gctggccaat gatcaggatg acccagcatt cattcgtgct gcgaccacgc
      661 cacgccgtgg cattggtcaa gccagtctgc agttgcttgg tgagtacgcg gccaaacgtc
      721 atttgggtat gttggctgct gcaagcgagc aggggttgca gtcgttgatg cagcccaaac
      781 agttacaggc tttgcaagcg ttcgtgggtt ttatgcagcg ctttgccatg cgcgcgagcc
      841 gtccggctaa acaagagccg gtggacgcgt tacttgatga actaatggct gccattagtt
      901 atgagaacta cttgtatgac gtcagcaccg acgatcgagc agcaaggtca cgctggcaga
      961 atgtgatcga attgctcgac tggctaaaaa cccgtgccac cgagacaggg tggggcttgt
     1021 cggaattggt gcagcatgtg gcattggtca ccatgcttga acgccagggc gagcaaagca
     1081 acgactcagt cacgctttca acactgcacg cagccaaagg gttggagttc gcgcacgtgt
     1141 atttgattgg tattgaggaa gggttgctgc cgcacttggg gcgtgagtca gatgatgcgt
     1201 cgcttgtagg cagtccagag cgcatcgaag aagagcggcg gctcatgtat gtaggtatta
     1261 cgcgcgcgca acgtagcctg cacctgactt ggtgtgcgcg caggcgtcgc ggtggccaag
     1321 agcacgcttg tgagttgtca cgatttgtgg cggaaatggg gttagagcag cagcccgagt
     1381 tggttgaccc aggtgcgtcg ctgaccccca agggcaggct cgatatgctc aaggcgatgc
     1441 tgacaaagcc aacttaatta agtcgaaata gttgagccaa gtgagctggg ccaaatgaag
     1501 cgagcgctaa acactttgtt ctcgttaggt aaatttagct taatttaaag ataaatagcc
     1561 atcttttatt aatacttaag actggttgcg caatgatcga atttccccga tcagctcgct
     1621 ggccgtcagt ccaattgggc caccatgggc tctggctagg cgatcggccg cgctgccgtg
     1681 cagccagacg gctgctggaa cggcgacctc tggtgcaaac ccctgggcca ataagctcgt
     1741 gagtaaaccg gttaagacat ccccggtacc tgccgtggcc aaaccaacat tacccgtgag
     1801 attgacctga cagtaaccac ctggattgca gaccaacgta tgttgacctt tgagcacgac
     1861 ccaggcgtga taggttgtgg ccaaccgttc ggcggctttg acgcgatcgg cttgtacgct
     1921 cgcggtatca gtctgtaaca gacggctggc ctcggtgggg tggggtgtta acaccacggg
     1981 gccagccgtc tgttaca
//
LOCUS       DATBNL010000120         2695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21561, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000120 DATBNL010000000
VERSION     DATBNL010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21561"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..1556)
                     /locus_tag="VIC30_02025"
     CDS             complement(150..1556)
                     /locus_tag="VIC30_02025"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEY7803203.1"
                     /translation="MAMLWQFSGAAKANTVGLPDFTAIVEEAENAVVNIRTTATVSSG
                     GRSGQDPYEMFRWFFGPDFQPPGGGGEPPQQRRGNPEPEQERTVPRGVGSGFFISDDG
                     YILTNHHVIDDASEIFVTLTDGQEYSAKVIGSDARTDVALLKIDVTGMDTLPIGTAQD
                     LKKGQWVLAIGSPFGLESTVTAGIVSAIGRETGDYLPFIQTDVAVNPGNSGGPLLDLN
                     GEVVGINAQIVSRSGGFMGISLAIPIDEAMEVAAQLQENGKVTRGRIGVQIGEVSKDV
                     AQASGLDNEQGAMVSRVVPDGPAEKAGVQPGDIILDFDGKPIQKWSDLPRVVGSTAPG
                     TEAKMKVWRKGKPVTLDITVGEMPSSEPVAAAPEPAKPESEGQSALGITVVALTDDEK
                     KELRVNHGVKVTAVDGAGASAGLVDGDVILTVGNTDVSSAEQFVELANQAQAGKPLGM
                     MVQRNGQAQWILVRPPKK"
     gene            complement(1703..>2695)
                     /locus_tag="VIC30_02030"
     CDS             complement(1703..>2695)
                     /locus_tag="VIC30_02030"
                     /inference="COORDINATES: protein motif:HMM:NF015825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HEY7803204.1"
                     /translation="GMRTGVVAHAQSVKPSDVGDVSDASDTQTVQAMQMLERAQQAAK
                     TLNYEGTFAHQRDGQMSAFTVTHRFSDGQEQERLEVLNSSPREYLRINDRVQCVIAQQ
                     RLIVTERQQHERFPAVLMDDGQDLSGHYQMMLSDRLSRVAGRACQPLSIVPKDEHRVR
                     YELCIDEQTGLLLEAQIRDTNGAVLEHMAFHQVQIGHPITDAQLQPAWDVTGWQVVDL
                     QPSQADFQALGWFYREPPGYRPVAELERQFRDGRTVKQLILTDGLATISIFIEPYQSD
                     LSHHQMAGAKSSGAVNLFGKRYGGHWVMVAGEAPAATVENLARSIVKTGVLHNK"
BASE COUNT          620 a          798 c          648 g          629 t
ORIGIN      
        1 tgatcgagaa attacgaata tgctgcatgg aacctgcgaa ctttaggatt aacttgcatc
       61 ggggcaagtc accgagcaaa caaaaggaaa ggggcatacg cccctttcaa tgtgctgcgt
      121 cactagcacc gtagtttacc ctgatgtggt tacttcttcg gtggacgcac caaaatccac
      181 tgggcttgtc cgttgcgctg caccatcata ccaaggggtt taccggcttg ggcctgattg
      241 gctaactcaa caaattgctc agctgatgaa acatcggtgt ttccgaccgt caaaatcaca
      301 tcaccatcaa ccaacccagc acttgctccg gcgccatcaa ctgccgtgac cttaacgccg
      361 tggttgacac gcaactcttt cttctcatca tcggtcaggg cgactaccgt gatgccaagc
      421 gcagactgcc cttcgctctc gggcttggcc ggctcaggtg ccgctgccac aggctcgctt
      481 gaaggcatct caccgaccgt gatgtccagt gtgactggct tgcctttgcg ccaaaccttc
      541 atttttgctt cggtgccagg ggccgtggat ccaaccacgc gcggcaaatc agaccacttt
      601 tggatcggct tgccatcaaa atccaagata atgtcaccgg gctgcacgcc ggctttctca
      661 gccggaccgt caggcacaac acggctgacc atcgcacctt gctcgttgtc cagaccactg
      721 gcttgggcga cgtccttgct aacctcgcca atctgcacac cgatgcgtcc tcgggtgact
      781 ttgccgtttt cttgtaactg agccgctact tccatggcct cgtcaatcgg gatggccagc
      841 gagataccca tgaagccgcc gctgcgcgaa acaatttgcg cgttaatacc gaccacctcg
      901 ccattcaaat ccaggagggg gccgcccgag ttacctgggt tgactgccac atcggtctga
      961 atgaaaggca aataatcgcc ggtttcacgt ccaatcgcgc tcacaatgcc agccgtcact
     1021 gttgactcca agccaaacgg agacccaatg gccaacaccc actggccttt tttcaggtct
     1081 tgtgccgtgc ctatgggcaa ggtatccata cccgtgacat cgattttgag caaagccacg
     1141 tccgtacgtg cgtcactacc gatgactttg gcgctgtact cctggccgtc agttagcgtg
     1201 acaaaaatct ctgaggcatc atcaatgacg tgatgattgg tcagaatata gccatcatca
     1261 ctgatgaaaa accctgagcc aacgcctcgg ggcactgtgc gctcctgctc gggctctgga
     1321 ttgccgcgac gctgctgcgg gggctcaccg ccaccgcctg gtggctgaaa atctggtccg
     1381 aagaaccagc gaaacatttc atacgggtct tgacctgagc gcccaccact gctcaccgtt
     1441 gcggtggtac ggatgttaac gaccgcattt tcagcctctt cgacgattgc ggtgaaatca
     1501 ggtaagccga ccgtattggc ttttgctgcc ccggaaaact gccatagcat tgccatcaac
     1561 acacttaaaa acatcaagcg ccataggttg acaacctgtg ccccacgcgc gggcttggct
     1621 aaagttgatt gcatcgcact ttgattcgtc atgttcactc cgtgtattgc aatatcgtgg
     1681 ttgaaatcgt aattacttgt cattatttat tatgcaaaac gcccgtcttg acaatggatc
     1741 gcgccaagtt ctctacagtt gcggccggtg cctcaccggc aaccatgacc caatgcccac
     1801 cataacgctt accaaacagg ttgaccgcac ctgagctttt tgccccggcc atctgatgat
     1861 gagacaaatc tgactgataa ggttcaataa aaatggagat cgtggctaaa ccatcagtca
     1921 aaataagctg tttgaccgtt cgcccatcac ggaactggcg ttcgagctcg gcgacaggtc
     1981 tgtatcctgg tggctcacga taaaaccacc ccaatgcctg gaaatcggct tggcttggct
     2041 gcaaatccac cacctgccaa ccagtcacgt cccaagcagg ctgaagttgg gcatcggtga
     2101 tcgggtgtcc gatttgaacc tggtgaaagg ccatgtgctc taaaactgca ccgttggtgt
     2161 cacgtatttg tgcttcaagc aacaaacccg tctgttcatc tatgcataac tcgtaacgaa
     2221 cccgatgctc atctttgggc acgatactaa gcggctggca agcgcgtccg gctacccgcg
     2281 acagacggtc agacagcatc atctgatagt ggccagacaa atcctgccca tcatccatca
     2341 acaccgctgg aaaacgttca tgttgctggc gctcggtcac aatcaatctt tgttgcgcaa
     2401 tcacgcattg aacccggtca ttgatgcgca aatactcgcg tggactgctg ttgagcacct
     2461 cgaggcgctc ctgctcctgg ccatcactaa agcgatgagt gaccgtaaat gcactcatct
     2521 gaccatcacg ctgatgcgca aaggtgcctt cgtaattcaa tgttttagct gcttgctggg
     2581 ctcgctcaag catttgcatg gcttgaacag tctgagtatc actggcatca ctgacatcac
     2641 caacatcgct aggcttgacc gattgtgcgt gcgccacaac accagtcctc atccc
//
LOCUS       DATBNL010000121         3135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_91248, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000121 DATBNL010000000
VERSION     DATBNL010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91248"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VIC30_02035"
     CDS             <1..235
                     /locus_tag="VIC30_02035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803205.1"
                     /translation="RLLDMPAVFPNMMYAMNVIDDLRRQVMQHFSQAAQVGAQVIANQ
                     ARNQQGQQTAAGQAPAEATAEAPGEATSEATKA"
     gene            315..2036
                     /locus_tag="VIC30_02040"
     CDS             315..2036
                     /locus_tag="VIC30_02040"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEY7803206.1"
                     /translation="MKQLVKHLTMVYLAAQSTALAPSLAFSQALPPDAGSIMRETEQL
                     RAPDVPRLSPRVVPEAPVKPDPDALTFVVKQFDLTGVTLVPEADVQAALKPWLDRPIT
                     FEELEMALNAISELYQKDGWYVRPQLPAQDIVDGTVTINIIEGKLGEVDPGINEDMPL
                     SAERVQKFITARQSKGDPLNMDDLSRAITILNEQPGVSAQAALAPSLEPGASDVVVET
                     VRLPAVSGSVQADNWGAKSTGYYRATGNANWNNPFGIGDQLQAAVMASEGTVYGQLGY
                     TLPVGYDGWRLGGSFSALYYKLLGEFATLNNTGTANTFSLSATYPLIREATSNATLSI
                     SGSDSHYDNNYRLEDQSLTISKRVSLAAVSITGDEADDYFGGGFSVYGLTLTSGYAKL
                     GDKTEDRVGANTYGSFATLGGNGGRLQRLTDSTSLWLSFSGQWASQNLDSSQKFSLGG
                     PQGVRAYPVYEATGDQGWLGTVEARWDFFEGAQASVFYDMGWIQQFKSTGHFQDVATD
                     LLGPNTYNLKGWGVGVSYNYNNRVSMKFTVASRIGSNPGANPVTGADGDGTNDKTRFW
                     FNVVVPL"
     gene            2033..>3135
                     /locus_tag="VIC30_02045"
     CDS             2033..>3135
                     /locus_tag="VIC30_02045"
                     /inference="COORDINATES: protein motif:HMM:NF017658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEY7803207.1"
                     /translation="MNHVYRVVFNRVQGVWQAVTENAKSQGKIGGTVRRHARRTSTRT
                     ATRTVGSLSLTAKTAAAVLAASGMSGAIETFSGFNTVSAQPAANQLPQGASIAGGTVT
                     IDQSGAQMQINQSTQKGIINWQQFDVGSKASVHFNQPNADASTLNRVNSATASQIHGQ
                     ISAVGKVFLLNSNGVVFGPSARVNVGALVAGAMKITDEDFLSGNYKFTDGKGVITNMG
                     ELTAEEGGLIALLAPQVINEGVIRAKKGTIVLAAGEAITLTNLASNVTVVVDKPALDA
                     LIKNKHLVSAPDGRVFMSTRAAHQLARAVISNTGTIEATGARRVGDVIRLEGNTVINE
                     GVITASNTASNTASNTTSSTQSTETTATANNQG"
BASE COUNT          728 a          842 c          897 g          668 t
ORIGIN      
        1 ccgtctcttg gacatgccag cggtatttcc caacatgatg tatgccatga acgtgattga
       61 cgatttgcgt cgccaggtca tgcagcactt ctcacaggcc gctcaggtcg gtgcgcaagt
      121 gattgccaac caggctcgca atcagcaggg tcagcagact gcagctggtc aagcaccggc
      181 tgaagcaact gctgaagctc ctggcgaagc aactagcgaa gcaactaagg cataagtaaa
      241 agaggcacat ttaaaggcga cacagattgc gcggtgtgct cacaaggtgg actgcgcagt
      301 gacatgggtc atagatgaag caactggtaa aacatttgac aatggtctat ctcgcagcac
      361 agtcgaccgc attggcaccg agcctggcat ttagccaggc tttaccgcct gatgcgggct
      421 cgatcatgcg cgagacagaa cagctgcgcg cgcctgatgt gccgcgcttg tcgccccgtg
      481 ttgtgccaga agcaccggtt aaacccgacc cggatgcctt gacctttgtg gttaagcaat
      541 ttgacttaac gggtgtcacg ctggtgccag aagctgacgt gcaagccgca ctcaaaccgt
      601 ggcttgaccg cccgattacg tttgaagagc tggaaatggc gttaaacgcc atttccgagc
      661 tttatcagaa agatggctgg tatgtccggc cgcagttacc tgcgcaagac attgtcgatg
      721 gcacagtcac catcaacatc attgagggca agctcggtga agttgatccc ggcatcaatg
      781 aagacatgcc gttgtctgcc gagcgcgtgc agaaattcat caccgcgcgt cagtccaagg
      841 gtgacccctt aaacatggac gatttgtcac gcgcgatcac gattttgaat gaacagcccg
      901 gtgtgtcggc gcaagccgca ttggcaccga gcttggagcc tggtgcttca gacgttgtgg
      961 tggaaactgt tcggcttcca gcagtctctg gcagcgtgca ggctgacaac tggggggcaa
     1021 agtccaccgg ttactaccgt gcaacaggca atgccaattg gaacaaccca ttcggtattg
     1081 gtgatcagtt gcaagcggct gtgatggcca gcgaaggcac ggtctatggc cagttgggct
     1141 acacactgcc tgttggttat gacggctggc gtttgggagg ctcgttttct gcgctttact
     1201 acaagctgct tggcgaattc gcgacactga acaacaccgg cacggccaac actttctcgc
     1261 tctcggcgac ctatccgctg attcgcgagg ccacaagtaa cgccacgctg tcgatctcgg
     1321 gttcagattc gcactacgac aataactacc gattagaaga tcagagctta acgattagca
     1381 agcgcgtctc gctagcggcg gtttcgatca cgggcgacga agccgatgac tattttggtg
     1441 gtggcttcag tgtttatggt ctgacgttga cctcgggtta cgccaagctt ggcgacaaaa
     1501 ccgaggaccg cgttggtgcc aacacctacg gttcgtttgc cacacttggt ggcaatggtg
     1561 gtcgcctgca gcgactcaca gacagcacca gcttgtggct gtcattctct ggccaatggg
     1621 cctcgcagaa cctcgattct tcacagaaat ttagcctcgg cggcccgcag ggcgttcgtg
     1681 cttatcccgt atacgaagcc accggtgatc aaggctggtt gggcacggtt gaagcgcgct
     1741 gggatttctt tgagggcgcg caggccagtg tcttttacga catgggttgg attcagcaat
     1801 tcaagagcac gggtcatttc caagacgtcg ccacagatct tctggggcct aacacctaca
     1861 acttgaaagg ctggggtgtg ggtgtctcgt acaactacaa caaccgtgtg tcgatgaagt
     1921 tcacggtggc ttcgcgcatt ggctcaaacc caggcgctaa ccccgtgacc ggtgccgatg
     1981 gtgatggcac gaatgacaaa acccggttct ggtttaacgt ggtggtgccg ctatgaacca
     2041 cgtctaccgc gtcgtcttta atcgggtgca aggggtctgg caggccgtga ccgagaacgc
     2101 caagagccag ggcaagattg gtggtacggt cagaagacat gcgcggcgca cttcaacacg
     2161 tactgcaacc cgcacagtcg gcagcctgag cctcaccgca aaaacagcgg ccgcggtgct
     2221 tgcggcctcc ggcatgtcgg gggcgatcga gaccttctcg ggtttcaata ccgtctcagc
     2281 acagccagcg gccaatcagt tgccacaagg tgcatcgatt gccggtggca cagtgaccat
     2341 tgatcagtct ggcgctcaga tgcagatcaa tcagtccaca caaaagggca tcatcaactg
     2401 gcagcagttt gatgtgggca gcaaggcgag cgttcacttt aatcagccca atgccgatgc
     2461 atcgacactg aaccgggtga attcagccac ggcttcacaa atccatggcc agatcagtgc
     2521 tgtgggtaag gtgttcctct tgaacagcaa cggcgtcgtg tttgggccaa gcgccagagt
     2581 caatgttggt gctttggtcg ctggcgccat gaaaatcacc gatgaagact tcttgtccgg
     2641 taactacaag ttcaccgatg gcaagggtgt gatcaccaac atgggtgagc tcaccgctga
     2701 agaaggtggt ttgattgcgc ttttagcacc acaggtcatt aacgaaggtg tgattcgtgc
     2761 caagaagggc acgattgtgc tggccgccgg tgaagcgatt acgctcacga acttggcctc
     2821 aaacgtcacg gtagtcgttg acaagcccgc actcgatgcg ctcatcaaaa acaagcattt
     2881 ggtctcagca cctgacggtc gggtgtttat gagcacgaga gctgcgcatc aactcgcgcg
     2941 tgcggtgatt tctaacaccg gtaccattga agcgaccggt gcccgtcgtg tcggtgatgt
     3001 gattcgcttg gaaggcaaca ccgtcatcaa cgagggtgtg attacggcga gtaatacggc
     3061 aagtaatacg gcaagtaata ccaccagcag cacacaaagc acagaaacca cagccacagc
     3121 caacaaccaa ggcag
//
LOCUS       DATBNL010000122         2884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21562, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000122 DATBNL010000000
VERSION     DATBNL010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21562"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1589
                     /locus_tag="VIC30_02050"
     CDS             <1..1589
                     /locus_tag="VIC30_02050"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEY7803208.1"
                     /translation="FEDVIAVLALYRPGPLESGMVDDFVNRKHGRASVDYFHPDLEHT
                     LKSTYGVIVYQEQVMLISQIIGGYSLGSADLLRRAMGKKKPEEMAKQRVMFQEGAAQK
                     GHDPQLAVKLFDLMEKFAGYGFNKSHSAAYALIAYHTAWLKAHHPAEFLAATLSSDMD
                     DTDKVQIFWRDCLANGVTVLPPDVNASNYRFEPVKDKHSDAGGPPRTIRYGLGALKGV
                     GQSAIEEVIRARAEGGPYQSLADFCARVNRQIVNRRSIESMIRAGAFDSVQANRAALL
                     ASLPMAVEAAEQAARSASQASLFGDDTNDVVAIELAKVEPWDLRRTLIEEKAALGFFV
                     SGHMFDAWRDEVRRVVTKSLNQITPSRDTQWLAGTIASVRTQMTRRGKMLFATLDDGT
                     AQIEVALFNELFEANRTRLREDHLLVVSGRVALDEYSGGMRVSVDEIFDLQAMRQARA
                     RALKIQLNGNADAQKLQEVLAPYRAAEPQQGMTVEVAYETQGAQCVLRLGEQWRVHVP
                     DELIQTLTQWVDTGNVEIRY"
     gene            1570..2658
                     /locus_tag="VIC30_02055"
     CDS             1570..2658
                     /locus_tag="VIC30_02055"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEY7803209.1"
                     /translation="MSRFVTEAAKRNWDRLRRRVAMWRWDRPQVSSAAFEDRIVFVRW
                     DAKLGDTIVLSWVFRELQRQRPDLQITVITAESFKELFVQGYGIDSVFVAGKRHDWGK
                     LSEIARQIRHPKYLVHLSLKWRPRDIRFVRELAPEHVVGLDDELKIVDIKLGERTRGL
                     HFSQKLVPWLDQIGVDTARQQYWIPRSPEAARDVDVWWPKEAPKGTPKGRVIGLCPYG
                     ASRKKYLDNEWIERIVRTCLAQSWQVVMLVLPSQLSGVQTLIQANHWQDCVWVNSGHA
                     SQNVLFEQIARCDAIVSVDTAVVHLAVGLGKPLLAIYNSRGQEFENWHPNDPNAIVVR
                     TVDSQDTTVNALEEAVLLESLARLIRTS"
BASE COUNT          678 a          689 c          838 g          679 t
ORIGIN      
        1 actttgaaga cgtaattgct gtacttgcac tgtaccgacc tgggccgttg gagtcgggga
       61 tggttgacga ctttgtgaac cgcaagcacg gcagagcctc ggttgattat ttccatccgg
      121 atctagagca cacccttaag agtacttacg gggtcatcgt ctaccaggaa caggtgatgt
      181 tgatctcgca gatcatcggc ggctattcac tcggaagcgc ggacttgtta cgccgtgcca
      241 tgggtaagaa aaagcccgag gaaatggcca agcagcgcgt gatgttccaa gaaggtgctg
      301 cacaaaaagg ccatgatcca caactcgccg tcaagctgtt tgacttgatg gagaagtttg
      361 ccggctatgg ctttaacaag tcacactcgg cggcgtacgc gttaattgcg tatcacacgg
      421 cttggctcaa ggcgcaccac ccagccgagt tcttagcggc gacgttgtct tccgacatgg
      481 atgacacaga taaagtccag attttttggc gcgactgttt ggcaaacggc gtgaccgtgc
      541 tgccacccga tgtcaacgcc tcgaactacc gctttgaacc cgtcaaagac aagcatagtg
      601 acgctggtgg gccaccgaga accattcgct atggtttggg tgccttaaaa ggggtggggc
      661 agtcagccat cgaagaagtg atccgtgcgc gcgcagaggg cgggccttat cagtctttgg
      721 cagacttctg cgcgcgcgtt aaccgccaga ttgtgaatcg acgctcgatt gagtccatga
      781 tcagagctgg agcgtttgat agcgtgcaag ccaaccgagc agccttattg gcaagcctgc
      841 ccatggcggt ggaggcagcc gagcaagcag cccgcagcgc cagccaggcg tcgttgtttg
      901 gtgatgacac caacgacgtc gtggccattg aattggccaa agtcgagccc tgggatttaa
      961 gacgcacgct catcgaagag aaagccgcac tcggtttctt tgtcagcggt catatgtttg
     1021 atgcttggcg tgacgaagta cgtcgagtgg taaccaagtc actgaatcaa atcacgccat
     1081 cgcgtgatac gcaatggtta gctggcacga ttgcatcagt acgcactcaa atgacaaggc
     1141 gtggcaagat gctgtttgcc acgcttgatg atggcacggc ccagattgag gtggcgctgt
     1201 ttaatgaact gtttgaagcc aatcgcactc ggttgcgaga ggaccacttg cttgtggtca
     1261 gtgggcgcgt ggcgcttgat gaatactcag gcggaatgcg ggtgtctgtg gacgagatat
     1321 ttgacctaca agccatgcgc caggccagag ctcgtgccct gaaaatccaa ctcaacggca
     1381 atgccgatgc acaaaagctg caagaagtgc tcgcgcctta tcgtgctgca gagccccagc
     1441 agggtatgac ggtcgaggtg gcttatgaaa cgcagggtgc ccagtgtgtg ctgcgcttag
     1501 gcgagcagtg gcgagtccat gtgcccgatg agctgattca aacgctaacc caatgggttg
     1561 acactggcaa tgtcgagatt cgttactgag gctgcaaagc gcaactggga taggcttcgc
     1621 cgtcgtgtgg cgatgtggcg ctgggacaga ccccaggtca gttcagctgc ttttgaagac
     1681 cgtatcgtgt tcgtgcgttg ggatgccaaa ctgggtgaca caatcgttct gtcttgggta
     1741 tttcgagaac tgcaacggca gcgccctgat ttacagatca cggtcattac ggcggaaagt
     1801 tttaaagaat tatttgtcca gggttacggc attgattcgg tctttgttgc gggcaaacgg
     1861 catgattggg gaaagctaag cgagattgcc aggcagattc gacacccaaa gtacctcgtg
     1921 catttaagtc ttaagtggcg cccacgtgac attcggttcg tgcgcgagtt ggctcccgag
     1981 catgtggttg gtctagatga tgagctaaag atcgttgaca tcaagctagg tgaacgaaca
     2041 cgcggactgc atttctcgca aaaattagtg ccttggcttg atcagatcgg tgttgacacc
     2101 gcccgtcaac aatattggat accaaggtca cccgaggcag ctcgggatgt tgatgtctgg
     2161 tggccaaaag aggcaccaaa aggaacacca aaagggcgag tgattgggtt gtgtccctat
     2221 ggggcgagcc gtaaaaagta tttagacaat gagtggattg aacgtattgt tcggacgtgc
     2281 ctggcacaaa gttggcaggt cgtcatgctc gttctcccta gtcagctctc tggcgttcaa
     2341 acgctgatcc aagccaatca ctggcaggat tgtgtttggg ttaactcagg ccatgccagc
     2401 caaaacgtgc tgttcgagca gattgctcgt tgcgatgcca ttgtttcggt ggacacagcg
     2461 gtggtgcatt tagcagttgg tttaggcaaa ccactgctag ccatttacaa ctcgcgtggg
     2521 caagagtttg aaaactggca tcccaatgac ccaaacgcaa tcgttgtgcg aacagtggat
     2581 agccaagaca cgacggtaaa tgcattagag gaagctgtgt tgcttgaatc gctggcgagg
     2641 ctaattcgca cttcttagca tcactttaat tcgtgcctag aaagtgtaag cgtcacgcta
     2701 ttttgccggc gcgtttatgg tgtcgtgcgg tgtcatgtgg cgtcatctgg tggtactcgt
     2761 ttccagcatc caattaaaga gcgactcaat aataattcgc gctgatttag gtagcggtac
     2821 gattcaacgc atggatacct tgctttgcga cgccaaataa tggcagcgtt gatcagtgct
     2881 aata
//
LOCUS       DATBNL010000123         3473 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1513, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000123 DATBNL010000000
VERSION     DATBNL010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3473
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /gene="glnL"
                     /locus_tag="VIC30_02060"
     CDS             complement(<1..920)
                     /gene="glnL"
                     /locus_tag="VIC30_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003811167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HEY7803210.1"
                     /translation="MTATEPFDLLATTVLLLDRDGVVVAANSAAEDLFGRSKRQIEGQ
                     MAIALFEEDTALAQSVLHACEGLLESCRQVATIGRGAAQREVSVSTLSLMGQIWAALI
                     EVADLESRSVVDRTQRLADEIQVQHELLRNLAHEVKNPLGGLRGAAQLLEAELPDQRL
                     TEYTQVIISEADRLQGLVDRLAGPQSSPMQLGSVNIHEVCERVCALVQAEFSGVDFVR
                     DYDASMPELEADSARLVQALLNVVRNAAQILTQSETPDARVTIRTRIARQIMLHRRQH
                     RMVVEVAVLDNGPGVPTQIQDKVFHPLVTAR"
     gene            complement(964..2376)
                     /gene="glnA"
                     /locus_tag="VIC30_02065"
     CDS             complement(964..2376)
                     /gene="glnA"
                     /locus_tag="VIC30_02065"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEY7803211.1"
                     /translation="MSTTQEVLKMISDNDVKFVDLRFTDTIGKEQHVSVPARLVDADK
                     LESGQAFDGSSIAGWKGIEASDMLLMPDLDTAHMDPFREESTLILTCDVLEPSDMKGY
                     DRDPRSLAKRAEAYLKSTGLGDTAYFGPEPEFFVFDGVTWSDDMSGSFVKIKSEEGSW
                     STGTDMEGGNLAHRPRVKGGYFPVPPVDSFQDMRSEMCLLLEEQGVPVEVHHHEVAGA
                     GQSEIGTLFNTLVRRADWNQVLKYTVHNVAHAYGKTATFMPKPVVGDNGSGMHVHQSI
                     WKDGQNLFSGNGYAGLSEFALFYIGGIIKHARALNAITNPGTNSYKRLVPGFEAPVKL
                     AYSARNRSASIRIPYVGNPKGRRIEARFPDPLANPYLAFSALMMAGLDGVQNKIHPGD
                     AADKNLYDLAPEEDAKIPTVCHSLDQALEALDADREFLTRGGVFSNEMIDAYIELKMA
                     EVTRMRMTTHPIEFDMYYSL"
     gene            complement(2595..>3473)
                     /gene="hemW"
                     /locus_tag="VIC30_02070"
     CDS             complement(2595..>3473)
                     /gene="hemW"
                     /locus_tag="VIC30_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017522504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEY7803212.1"
                     /translation="LWPDAEITLEANPGTAEASRFQSYAQSGVNRLSLGIQSFNDEQL
                     KRLGRVHDAKQARDAIEMACAAVSRVNLDLMYGLPEQSTAECKDDFQQAIAFGTEHLS
                     LYQLTLEPQTVFAKYPPTLPDESVIEQMEEAIDELVVSAGWQRYEVSAYAKPDAQCRH
                     NLNYWTFGDYLGIGPGAHSKISFPDRIVRQARTRNPEQWIQAAQRQDESHITEQRTLT
                     DDDLPFEFFLNVLRLRNGVPLSVLTDHTGMSVAQVQPMIDKARRKGLLSVDQGTIAPT
                     ALGWRHLNELQTLFLN"
BASE COUNT          805 a          942 c          908 g          818 t
ORIGIN      
        1 cgtgctgtaa ccaaggggtg aaataccttg tcctgaattt gagtcggcac ccctgggccg
       61 ttatcaagta cagccacttc taccaccata cgatgctgac gccgatgcag catgatttgt
      121 ctggcaatgc gggttcgtat ggttaccctt gcatctggcg tttcagactg cgtcaggatt
      181 tgcgccgcat tgcgaacgac attcagtagc gcttgcacca gtcgtgcact gtcagcctca
      241 agttctggca ttgatgcgtc ataatcgcgc acaaaatcaa cgccgctgaa ctcagcctgt
      301 accaacgcac agacgcgctc gcagacttcg tgaatgttga cagacccaag ttgcattggg
      361 cttgactgcg gccctgccaa tcgatcgaca agtccttgca ggcgatctgc ctcggaaata
      421 atgacttgcg tgtattcggt cagacgctga tctggtagtt ctgcctcaag caattgagct
      481 gcaccacgca gtccgcccaa ggggttcttg acctcatgtg ccaaattacg cagtaactcg
      541 tgctgcactt gaatctcatc ggctaaccgc tgcgtgcgat caaccaccga tcggctctca
      601 aggtctgcaa cttcgatcaa cgctgcccag atctgcccca ttaggctgag cgtggaaacc
      661 gacacttcac gttgcgctgc cccacgcccg atggtggcga cttgacgaca actctcgagt
      721 aagccttcgc aggcatgcag cactgactgc gccaaggccg tgtcctcttc aaacaaggcg
      781 atggccattt gcccctcgat ctggcgcttg gacctgccaa acaggtcttc agcggccgag
      841 ttggcagcca ccaccacgcc gtcacgatca agtaacaata cggtggtggc cagcaggtca
      901 aagggttcag tggctgtcat ggttgtcggg ccgggtcagg cccgaccacc tactcacaca
      961 tcgttacagg ctgtagtaca tatcgaactc aatcggatgc gtggtcatgc gcatgcgcgt
     1021 gacttctgcc atcttcagtt cgatgtaggc gtcaatcatc tcgttgctaa acacaccgcc
     1081 gcgcgtcaag aattcgcggt ctgcatcaag cgcctcaagt gcctggtcaa gtgaatgaca
     1141 tactgttggg atcttggcat cctcttccgg tgccaggtca tacagattct tgtcagccgc
     1201 atcacctgga tgaatcttgt tctgcacgcc atctagacct gccatcatca gagccgagaa
     1261 agccaaatac gggttcgcca ggggatcggg gaaacgtgcc tcgatacgac ggcccttagg
     1321 gttaccgacg taagggatac ggatcgacgc cgagcggttg cgtgctgagt aagcgagctt
     1381 gaccggtgct tcaaatccag gcaccaaacg cttataggag ttggtaccgg ggttggtaat
     1441 ggcgttcaaa gcacgtgcgt gcttgatgat gccaccgata taaaagagcg caaactctga
     1501 taggcctgca tagccgttac ctgaaaacag gttttgtcca tctttccaaa tcgattggtg
     1561 cacgtgcata cccgagccgt tgtcaccaac cacaggctta ggcatgaaag tcgcggtctt
     1621 gccataggcg tgtgcgacgt tgtgcacggt gtacttgagc acctggttcc agtcagcacg
     1681 acgaaccaac gtgttaaaga gcgtaccgat ttctgattga ccggcgcccg caacttcgtg
     1741 gtgatgcact tcgacaggca cgccctgctc ttctaagagc aagcacattt ccgagcgcat
     1801 atcttggaat gagtcaacgg gtggtacggg gaagtagccg cccttgacgc gaggacggtg
     1861 agccaggttg ccaccttcca tgtctgtacc ggtcgaccat gaaccctctt cggatttaat
     1921 tttgacgaag ctgccagaca tgtcatcaga ccaggtcacg ccatcgaata caaagaattc
     1981 aggctctgga ccgaaatatg ctgtgtcacc aagaccggtg gactttaagt aggcttcggc
     2041 acgcttggcc aatgaacgtg ggtcacggtc atagcccttc atgtctgatg gctcaagcac
     2101 atcacacgtc aggatcaacg tggactcttc acggaaagga tccatgtgtg ctgtatccaa
     2161 atcaggcatg agcaacatgt cagacgcttc gatgcctttc caaccagcaa tcgaagaacc
     2221 atcaaacgcc tgacccgact caagtttgtc agcgtcaacc aggcgcgcag gcacagagac
     2281 gtgctgctct ttgccgatcg tatcggtaaa acgaaggtca acgaatttga catcgttgtc
     2341 tgagatcatc ttcaggactt cttgggtcgt gctcataatg gctccgattg tttgagtgtt
     2401 tagctaaaaa ttccaaactc agttgggctt acgcactagt aagcaacatt catgccaagt
     2461 ttgacgcacc agaaaacgca tggaaatggg caatgggcat aaaacaaagc actaacatgg
     2521 tgcattatgc accatgttag gcgcttattt ggtgcttatg tttggtgctt atgtttggtg
     2581 cttatattca gtgcttagtt tagaaacaag gtctggagct cgtttaagtg gcgccagccc
     2641 aaggcggtcg gtgcaatggt gccttgatcg acactgagca ggccttttcg tcgtgctttg
     2701 tcgatcatgg gttgaacttg ggcaacagac atccccgtgt gatccgtcaa aacgctcaac
     2761 ggcacgccgt tgcgcaaacg aagcacgttg agaaagaact caaacggcag atcatcatct
     2821 gttagcgttc gttgctcggt aatgtgggac tcatcttgac gctgcgcggc ttgtatccac
     2881 tgctcagggt tgcgtgtgcg cgcttgtcga acaatccgat caggaaatga aatcttgcta
     2941 tgggcgccag gaccaatgcc caggtaatcg ccaaaggtcc agtaattcaa gttgtgccga
     3001 cattgagcat ctggctttgc ataggccgag acctcataac gttgccaacc ggcgctaacc
     3061 acgagctcat caatcgcctc ttccatttgt tcgatgacag actcgtctgg cagcgtcggc
     3121 ggatacttgg caaacaccgt ttgtggttca agggtcagct gatacaggct caggtgctca
     3181 gtcccaaatg cgatagcctg ctgaaaatca tctttgcact cggccgtgct ctgctcaggc
     3241 aatccataca taagatcgag attgacccgg ctaacagcag cgcacgccat ttcaatggcg
     3301 tcacgggctt gtttggcgtc atgcacgcgc ccaaggcgtt taagctgctc atcattgaag
     3361 gactgaatgc ctagcgacaa ccgattaaca ccgctttgtg cataagactg aaagcggctg
     3421 gcttctgccg tgcctgggtt ggcttctagc gtgatttccg catctggcca gag
//
LOCUS       DATBNL010000124         4561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161117, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000124 DATBNL010000000
VERSION     DATBNL010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4561
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161117"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1579
                     /locus_tag="VIC30_02075"
     CDS             <1..1579
                     /locus_tag="VIC30_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003805520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7803213.1"
                     /translation="ALTNGYCRSLKLALNHRLLVLVIGLLVASSSVFFFTNLKSELAP
                     VEDRGVIFGVISGPEGATLGYTMQSALKVDDIYAQIPEAAARQLIVGFPTVADGFAIL
                     RLKPWDERERKQQDITRSLFPQFMALPGVRAFPTNAPSFGLRASSRPIEFVIMSQAPY
                     AELYDMVEGYMDKLGDYPGIGNLQMDLRMNTPELRVEVDRDKLADLGIDVANVGRTLE
                     TMLGGRQVTRFEQDGEQYEVVVQVSPGERNEPTDISNMYVRGGDGNMVQLSNVATVEE
                     SVAPQSLNHFNRLRAVKVSGNVMPGYTLGESLDHMFDVAEQTFPSTVQFDLDGQSREY
                     KESSAGIYAVFGMALIFIYLVLAAQFESWRNPLIIMLTVPLAMTGALAALYLTGGTLS
                     IYSQIGLVTLVGLITKHGILIVEFATQLREQGEQMLEAVTEASVLRLRPILMTTGAMV
                     LGAVPLALATGAGAESRVQIGWVLVGGLVLGTLLTLYVVPVAYTLIATRKIRGVIEGE
                     APGHPDHPEHPHTNPSN"
     gene            1593..2285
                     /gene="dnaQ"
                     /locus_tag="VIC30_02080"
     CDS             1593..2285
                     /gene="dnaQ"
                     /locus_tag="VIC30_02080"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEY7803214.1"
                     /translation="MRWVILDTETTGLDPEDGHRIIEIGAVEVMNRGITGRDFHYYLN
                     PDRDSDAGALEVHGLTSEFLQDKPRFKDIVDEFLAFIKDAELIIHNAPFDVKFLNAEL
                     AKAGHHKVTTYSGAVTDSLAHAKTLYPGKRNSLDALCERHGVSNAHRTLHGALLDSRL
                     LAEVWLAMTRGQDSLAIEDDVHPSQNMAAEKRQFYDLPLIEVSTAELEAHEQYLKVLD
                     EASAGQTVWRGL"
     gene            2354..2779
                     /locus_tag="VIC30_02085"
     CDS             2354..2779
                     /locus_tag="VIC30_02085"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY7803215.1"
                     /translation="MMGTNLVLLVARILMAPIMIVYGAQKLTDIGNFLNNPATVRMME
                     AIAGGAAAPIWFAYANALFQLLTGVFVLVGFKTRLTALLVVIWLVPVTYFGHPFWAGI
                     DPAFNEAQFYKNLAIIAAYGLIACMGAGKFSVDHAPWKK"
     gene            2871..3296
                     /locus_tag="VIC30_02090"
     CDS             2871..3296
                     /locus_tag="VIC30_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803216.1"
                     /translation="MKRLIQGALFALTVSMAPLTFAQPNMVGVWVQEGVSSGARAGLS
                     NSGHASNDQTKPKYTHQSPTQWRMEVTEQEGRALHAKWCSENKCESVVGAFRGNGDLL
                     LVDEDGIFIGSVDDGKLELCYLETGEGYQIASCMDFTKQ"
     gene            3475..3549
                     /locus_tag="VIC30_02095"
     tRNA            3475..3549
                     /locus_tag="VIC30_02095"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3507..3509,aa:Val,seq:cac)
     gene            4472..4555
                     /locus_tag="VIC30_02100"
                     /pseudo
     CDS             4472..4555
                     /locus_tag="VIC30_02100"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1077 a         1079 c         1263 g         1142 t
ORIGIN      
        1 tgcactaacc aatggttact gtcggtcatt gaaactggcg ttgaatcatc gtttgttggt
       61 tttggtgatt ggattgcttg tggctagcag cagtgtgttt ttctttacca atctcaaaag
      121 tgagctggcg cccgttgaag accgcggcgt gatttttggt gtgatctccg ggcctgaggg
      181 cgcaacgctt ggttacacca tgcaaagtgc actgaaagtc gatgacattt atgcacagat
      241 ccccgaggct gctgcacggc agttgattgt tggtttccca acggtggccg acgggtttgc
      301 gattttgcgt ttgaagcctt gggatgagcg cgaacgaaag caacaagata ttacgcgctc
      361 gctatttccg caatttatgg ccttacccgg cgtcagagct ttccccacga acgcaccgtc
      421 attcggtttg cgtgcaagct cacgcccgat tgagtttgtg atcatgagtc aggcgcccta
      481 cgctgagctt tatgacatgg tcgaaggtta catggacaag ctaggtgact atccgggcat
      541 tggtaacttg cagatggact tgcgcatgaa cacgccagaa ttgcgtgtcg aagttgatcg
      601 tgacaagctt gcggacttgg gcattgatgt cgccaatgtc ggtcgtacgc ttgagaccat
      661 gttgggtggt cggcaagtca cgcgctttga acaagatggt gagcagtacg aagtcgtggt
      721 gcaggtgagc cctggtgagc gcaacgagcc aactgacatc tcgaacatgt acgtgcgtgg
      781 tggcgatggc aacatggtgc aattgtccaa tgtggcaaca gtagaggagt ccgtggcacc
      841 gcaatctttg aatcacttta atcggttgcg cgctgtcaag gtgtcaggca acgtgatgcc
      901 aggttacacc ttgggtgagt cgctagatca catgtttgac gtggccgaac aaacattccc
      961 gtcgacggtc cagtttgact tggacggaca atctcgcgaa tacaaggagt cttcagccgg
     1021 tatttatgct gtctttggca tggcgttgat ttttatctac ttggtgctcg ccgctcagtt
     1081 cgagagctgg cgcaatccgc taatcatcat gctgacggtg ccgttggcaa tgaccggggc
     1141 gttggcggct ttgtatctaa cgggtggcac gttgtccatc tacagccaga tcgggttggt
     1201 cacgctcgtg ggactcatca ccaaacacgg aatcttgatt gtggagtttg caacgcagtt
     1261 gcgtgagcaa ggcgaacaaa tgttagaggc ggtcactgag gccagtgtgt tgcgcctgcg
     1321 gcctatcctc atgaccacgg gtgccatggt gttgggcgcc gtgccgctgg ccttggccac
     1381 aggtgccggg gcggagtcgc gcgtgcaaat cggctgggta cttgtgggtg gtctggtact
     1441 cggtacactg ttgacgttgt atgtggtgcc ggttgcatac actctaattg ccacccgcaa
     1501 gattcgtggt gtgattgagg gtgaagcgcc tggtcacccc gatcaccctg aacaccccca
     1561 tacaaaccca tccaactagc aaggacaccg agatgcgctg ggtcattctt gacactgaaa
     1621 ccacggggct agaccccgaa gatgggcacc gtattattga aatcggtgca gttgaagtta
     1681 tgaaccgcgg tatcacggga cgggattttc attattactt gaatcctgat cgtgacagtg
     1741 acgcaggcgc gcttgaagtg cacgggctca cctcagagtt cttgcaagac aagccacgtt
     1801 ttaaagatat cgtcgatgag tttctggcgt tcatcaaaga tgcagagctc attattcaca
     1861 atgcaccgtt tgacgtgaag tttcttaacg cggagcttgc taaggcaggt caccataaag
     1921 tgaccacgta tagcggtgct gtgactgatt cattggcgca cgcaaaaacg ctctacccag
     1981 gcaagcgcaa ctcgcttgat gcgctgtgtg agcgtcacgg tgtgagtaac gcccaccgaa
     2041 cactgcacgg tgctttgctg gactctcggc ttctggcgga ggtctggctg gcgatgaccc
     2101 gtggccaaga tagcctggcc atcgaagatg atgtgcaccc aagtcagaac atggctgccg
     2161 agaaacgaca gttttatgat ttaccgctga ttgaagtcag tactgctgag ctagaagccc
     2221 acgagcaata tctgaaggtg ctcgatgagg ccagtgccgg tcagaccgtc tggcgtgggt
     2281 tataacttaa ccaaggctag atactctagt tgcagttcac tcaaaacaat aatgtctaaa
     2341 aataggtgtt tgcatgatgg gtaccaacct ggtgttgcta gtggcgcgta tcctgatggc
     2401 gccaatcatg atcgtatatg gcgcacagaa attaaccgac atcggtaatt ttttgaataa
     2461 cccagccacc gtccgaatga tggaggcgat tgctgggggt gcggccgcgc caatctggtt
     2521 tgcgtatgcc aacgcgttgt ttcaattgct gactggcgta tttgtgttgg tgggctttaa
     2581 aacgcgattg accgctcttt tggtggtgat ttggttagtg ccagtcacgt atttcggcca
     2641 cccgttttgg gcaggcattg atcctgcgtt taatgaggca cagttctaca aaaacctcgc
     2701 gatcatcgcc gcctatggat tgatcgcttg tatgggtgcg ggtaagtttt ctgttgatca
     2761 tgcgccatgg aaaaagtagc gctagatcgt agttgtacat acgcaagaaa gcgggcttgt
     2821 tgtggtggtc ataccaaata cccgtgtcct caaaatcaag gaaagttgaa atgaaaagac
     2881 tgattcaagg tgctctattt gcgctgacgg tgtcgatggc accattgacc tttgcgcagc
     2941 ccaatatggt tggtgtgtgg gtgcaggagg gtgtttcttc tggcgcacgc gctggcctta
     3001 gcaactcggg ccacgcatca aatgaccaaa ccaaaccaaa atacacgcat cagtcaccga
     3061 cacaatggcg catggaggtt accgaacaag agggccgcgc tttgcacgcc aagtggtgta
     3121 gtgagaacaa atgtgagtca gtcgtgggtg cttttagagg caacggcgac ctactgctag
     3181 tcgatgagga tggtatcttc attggttccg ttgacgatgg aaaactagag ctctgctact
     3241 tggaaaccgg tgaaggctat caaattgctt cttgtatgga cttcaccaag caatgaacgt
     3301 aaacaataac ccgagcagta aaccaaacag taaccacaag taacaacgac cagagtgaca
     3361 acgagccggc gcctagcttg agtgttgggt gtcggctcgt tttttagcac tctgtgtata
     3421 atctcggtct ctgcaaaacg cattgcagtt cctgacggtc tctcagaccc atcagggcgg
     3481 ttagctcagt ggtagagcac tgccttcaca cggcaggggt cacaagttcg aaccttgtac
     3541 cgcccaccaa attaatttgt ccagcgacag attggctcta ccccattaag gggggatgag
     3601 cattcatcac actcgattga tcacaccact ccatccgcat agagccaaga ctctcagacg
     3661 gtaattctca aagtttctaa atccaaatgc acggtgcgag attagaccca actttgtgtg
     3721 gaaagtattt cgtgggcgaa ggcgctagca gatttcttat cttgcagcta caagaaatga
     3781 caaagggcac cgaggtgccc ttggttgcag ggtggcaaac ttgtcatcgt tagggccact
     3841 ctggctgctt caacgccgaa acggaaccag actcaaagtc ctttacagga acgatcgaat
     3901 tatctcccag attgagtgcg tttgcaaccg caagtcttat ggcggtgaag tctcgatcag
     3961 gtagctttag ccttatcgtt tgacgaccac cgcggcgagt gcggatgtaa tgtgactcga
     4021 gccgtcccaa actaactgtg taaaccatgt cacatttggc ccatacagaa cacatagcgg
     4081 ttgcacctgg tctaggatct tgactgagtt catggtggta tggctggggg actgtcggtg
     4141 cggtcgtaga aagcgggatt attgtcacca gtcgacggtt gcgtttattg ggggtcagta
     4201 caacaacatc gcgttttttg atcatttccg gctctatcat tccgtggaaa tcacatcgca
     4261 cgatttcgcc cgaacgtggt tgatagagaa gtggcatcta gtaactttat gtgtcacggc
     4321 aacgaaaaag caccacaggg ggcaccacaa gaaatatacc aaaatgataa cctttggctt
     4381 tctgcatggc aaatgattgg gcatctatcc atgaccacgt caccatgtca gcaaagacaa
     4441 ccgcacctca cagtcaagat ttaaatgtgt tgcatgcggt tatacggaaa acgctgactt
     4501 ggtgggtgct ttaaatatta gcccgagggc atcgggtgct cgcctgtgga gttgaaacct
     4561 t
//
LOCUS       DATBNL010000125         2161 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_111206, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000125 DATBNL010000000
VERSION     DATBNL010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111206"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VIC30_02105"
     CDS             <1..651
                     /locus_tag="VIC30_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803217.1"
                     /translation="IAIETGKEAGVDAVLLNGDFMDFYSVSRYVSDPTQRDLAGEMQM
                     GRAMLEYLRSEFTGCQIWWKLGNHEERWASWIWQKAPEVYGVEDFTIEMLMRLKDYNV
                     KLIADMEPISIGGLTVLHGHEYRFAISNPVNPARGLYMRSKVSSMMGHLHQSSEHTES
                     DLKGKLVTTWSVGCLCQLRPRYAPLNKWNHGFAVVDTTGEDDYRVSNYRIHKGKLL"
     gene            759..995
                     /locus_tag="VIC30_02110"
     CDS             759..995
                     /locus_tag="VIC30_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803218.1"
                     /translation="MNIKVQLTKLEIGDCQVVGNWQLTAENGTVINADYVDIEALILN
                     TLENDYEGIDNVEVHVQGDNVRHCGWFIAQGPFN"
     gene            1416..>2161
                     /locus_tag="VIC30_02115"
     CDS             1416..>2161
                     /locus_tag="VIC30_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803219.1"
                     /translation="MKHHEIWREREPNLENLKAIIDQRNQVMNLNNKIQNQIRAFERR
                     TDDDPSGTTMAYLQEAAQRFKADMADMDNELTRFMKRMAKVDPLVKAAMGVKSCGPVT
                     VAYMRSYIDVTKARHASSLWSYCGLHKASHERYTKGEAGGGNKTLRTKLYTFADSQMK
                     GRGPYRFVYDSVKERLQASEKVVATRNTQGKLVESAWKDAKKSHIHGAALRAVMKHFL
                     ADYWYVARDLEGLDNGPCYAEAQLGGNHKTV"
BASE COUNT          615 a          503 c          580 g          463 t
ORIGIN      
        1 attgcaattg agacaggcaa ggaggctgga gttgatgccg ttctactcaa cggcgacttt
       61 atggactttt acagcgtttc aagatacgta agcgatccga cccagcgcga ccttgcagga
      121 gagatgcaga tggggcgggc aatgcttgaa tacttgcgca gcgaatttac aggctgtcaa
      181 atctggtgga agctcggcaa ccacgaggag cgctgggcaa gctggatatg gcagaaggcg
      241 ccagaggttt acggagttga agactttacg attgaaatgc tgatgcggct gaaggattac
      301 aacgttaagc tgattgccga tatggaaccg atcagcatcg gcgggctgac ggtgctgcat
      361 gggcatgagt atcggttcgc aattagcaac cctgtcaacc ctgcccgagg cctctatatg
      421 cgctccaagg tcagttcaat gatgggacac ctgcaccagt cctcagaaca cactgagagc
      481 gatttgaagg gcaagctggt cacgacttgg agcgtcggat gcttgtgcca gttgcggcca
      541 cggtatgcac cgctcaacaa atggaatcat ggatttgccg ttgtcgacac gacgggcgag
      601 gatgattaca gggtcagcaa ttatcgtatt cacaagggca aattgctcta ggtccaaaaa
      661 gtttttaagt tttttcaagt ttgcgcttga cccgttcgca ggtctggccg tataggtatg
      721 ccgtacacta aatactaatc actaacggag ataataaaat gaacataaag gtacaactaa
      781 caaaattaga aatcggcgat tgccaagttg ttggaaactg gcaactgact gccgaaaacg
      841 gaacggttat taatgccgat tacgtagaca ttgaggcgtt aatattaaac actctggaga
      901 acgattacga agggatcgac aacgtcgagg ttcacgttca aggcgacaat gtccgtcact
      961 gcggttggtt tatagcacag ggacctttta attaagagcc atggattacc aaattcagaa
     1021 caaaacctac cgcagaccaa gtttgcttcg tcgcatctac ttgcgcctgt ttgttaaatc
     1081 aactggccgc aagcttaaca tgaaggtcga gctatgagcc acctatcgca ccgtgaagca
     1141 gctttttggg ccgcaggcta ccagccacgg acgccaaaaa aagagttttt ggactgggtg
     1201 catgcccagt tgcggaaaag atacgaagaa aacctaaaac aaaacactaa gagaaagtaa
     1261 taacaatgcc taagaacaac ctaaaagcac aagtaattgg acccgagttt gagtttgaca
     1321 cgggatacct tatcgacatt caccgcccga caccaaagca cgaaggtggc gaatacgtag
     1381 acggcaacat ggaggtgctt acacctgagg accacatgaa gcatcacgag atttggcgcg
     1441 aacgtgagcc aaaccttgaa aaccttaagg ccatcatcga ccaaagaaat caggtcatga
     1501 atctgaacaa caagattcag aaccagattc gtgcgtttga acgtcgcact gacgacgatc
     1561 cgagcggcac gacgatggcg tacttgcagg aagcggctca gcggtttaag gccgacatgg
     1621 ccgacatgga caacgagctt acccgattta tgaagcggat ggccaaggtt gatccactgg
     1681 tcaaggcagc catgggagta aagtcctgcg ggcctgtcac ggttgcatat atgagatcat
     1741 acattgacgt cactaaggcc cgtcatgcat cgtcgctctg gtcctattgc ggactgcata
     1801 aagcatcgca tgagcgctat accaagggcg aagctggcgg cggcaataag actttacgca
     1861 cgaagctgta cacgttcgca gattcacaga tgaagggacg cggaccgtac cgtttcgttt
     1921 atgattcggt caaggaacgg ctgcaggcca gcgagaaggt cgttgcaacc cgtaacacac
     1981 agggcaagct ggtcgaatcg gcatggaagg atgcaaagaa gtctcacatt catggcgctg
     2041 cattgcgcgc ggtcatgaag catttcctcg ccgattactg gtatgttgcc cgtgacttgg
     2101 aaggacttga taacggtcca tgctatgctg aggcgcagct tggcggaaac cacaaaacag
     2161 t
//
LOCUS       DATBNL010000126         2883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_180831, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000126 DATBNL010000000
VERSION     DATBNL010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180831"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..2235)
                     /gene="acnB"
                     /locus_tag="VIC30_02120"
                     /pseudo
     CDS             complement(1..2235)
                     /gene="acnB"
                     /locus_tag="VIC30_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004633909.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
     gene            complement(2324..2599)
                     /locus_tag="VIC30_02125"
     CDS             complement(2324..2599)
                     /locus_tag="VIC30_02125"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009457716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7803220.1"
                     /translation="MTHDITHETELNRFSVTVDDQLCVLEYELADNLMTITHTRVPPA
                     VGGKGIAADLTRTALETARQHQWRVVPQCSYAAVYITRHPQYADLTS"
     gene            complement(2624..>2883)
                     /locus_tag="VIC30_02130"
     CDS             complement(2624..>2883)
                     /locus_tag="VIC30_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016453507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PrpF domain-containing protein"
                     /protein_id="HEY7803221.1"
                     /translation="HHAMMGTAAVAIGTAAAIPGTLVNLAAGGGDLQAVRFGHPSGTL
                     RVGAQAENINGQWTVKKAIMSRSARVLMEGSVLVPGDTLDV"
BASE COUNT          631 a          752 c          844 g          656 t
ORIGIN      
        1 gcatccatct tggtgggtgg agccacccag agtttgacgg gaatgtcacg cttgccttca
       61 agcaacttgg aggcggcacg gaagtgtcca atgttggtca tgcagcttcc gataaacact
      121 tcgtcaatgg tggcgccagc gacgtctgag agggttttga catcatccgg gtcgttgggg
      181 caagccacga tcggttcaac gatttcattt aagtcgatct cgatgactgc cgcgtagtcc
      241 gcatcaggat cgggatgcat gagttgtgga tctgccagcc aagcttccat ggccttaatg
      301 cgacgtccca tgctgcgctc gtcctcgtag ccattggcaa tcatccactt gagcatgacg
      361 atattgcttt gcaggtactc gatgatgggc tctttgttca agtgcaccgt gcagccggca
      421 gctgaacgct cggcagacgc gtcagaaagt tcaaaggctt gctcgacttt caagtccggc
      481 agaccttcaa tttccaggat gcgacccgag aagatgttct tcttaccttg cttggcaacg
      541 gtcagcaagt ctttcttgat ggcgtaaagc ggaatggcat tgaccaagtc acgcaaggtc
      601 acaccaggtt gcatcttgcc tttaaaacgc accaacactg actcaggcat atcgagcggc
      661 atgacaccgg tggccgcggc aaacgccact aggccagagc ctgccgggaa gctaatgcca
      721 atcgggaagc gggtgtgcga gtcgccgccg gtaccaaccg tgtcaggcag cagcatgcga
      781 ttgagccaag agtgaatcac accatcgcct gggcgcagcg agataccgcc acgggtgcta
      841 atgaattgcg gcaaggtgtg atgcgttttg acatcgacag gctttggata ggcggcagtg
      901 tgacagaaag actgcatcac caggtcagcc gagaagccta ggcaagcgag atctttgagc
      961 tcatcgcggg tcatgggacc ggtggtgtct tgactgccca ccgaggtcat gcgtggctca
     1021 cagtaggtgc ccggacgcac gccagtgcct tcgggcaaac cgcaagcgcg tccaaccatt
     1081 ttttgtgcca aggtgtagcc cttgccggtg tcggttgggt tatggggcaa gcggaaggct
     1141 tctgaaggac ccagacccaa ggcttcacgc gccttggccg tcagcccacg gccgatgatc
     1201 aaggggatgc ggcccgccgg cacgcacttc atcaagcagg acgtcggact ttaagctgaa
     1261 ctcggcaatc acttcaccgt ttttcagggc tttgccgtca taggggcgta attcgatttc
     1321 atcgcccatt tccatttgcg agacatcgag ttcgatgggc atggcgcccg catcttccat
     1381 ggtgttgtag aagattggtg caatcttgcc acccaagcac acgccaccaa aacgcttatt
     1441 cggtacgtgt ggaatgtctt ggccagtgaa ccacagcacc gagttggtgg cggacttgcg
     1501 tgaagaacct gtgccgacaa catcgccgac gtacgctacg agattacctt tggctttgag
     1561 ttcattgatc agtttgattg gaccaatctt gccgggctca tcaggctcga taccgtcgcg
     1621 cgtatttttg agcatggcca aggcgtgcag tggaatgtca ggacgggtcc acgcatccgg
     1681 tgcaggtgac agatcatcgg tattggtttc accggagact ttaaataccg taatttttaa
     1741 gctttctggc acttcggggc ggctcgtgaa ccattcggcg tcagcccagc tttgcataac
     1801 cgctttggcg ttggcactgc ctttgtcagc tttttctttg acgtcatgga aagcgtcaaa
     1861 catcagcagg gtttttttca gggcgtcagc ggcgacttga ccgacttcag ggtcgtccaa
     1921 gacttcaacg agcgcgctga tgttgtagcc gcccagcatg gtgccaagaa tttcagtggc
     1981 acgcacgcgt gagatcaatg ggcagacttc tttacccaaa gacacggcgg cgaggtatga
     2041 ggctttgact ttagccgcgt catcaacacc ggcaggtacg cgctcggtaa aaagctcaag
     2101 caaaaagtct tcttcgcctt tgggcgggtt tttaagcagt tcgaccagat cagcggtttg
     2161 ttgcggcgtc agtggcaggg cagggatgcc aagcgcagcg cgttcggcaa catgttcacg
     2221 ataggcttct agcatggggt gggcctttat agagagggaa agaaacaaaa aacagtgaaa
     2281 tcaaaacaaa atcaaaaaat acaagtgcgt gtcgctcaac cggtcaggaa gtcaagtcgg
     2341 cgtattgagg gtgacgcgtg atgtaaacag cggcatagga gcattgagga accacgcgcc
     2401 actgatgttg gcgtgcggtt tcaagggctg tgcgggtgag gtctgctgcg atgcctttac
     2461 cgccaacagc cgggggaacc cgggtgtgtg tgatggtcat gaggttgtca gccaactcat
     2521 actcgagcac acagagttgg tcgtcaacgg tgacagagaa acgattcaat tcggtttcgt
     2581 gggtaatgtc gtgtgtcatg tcttctacct gttaaacatt tgctcagaca tcaagcgtgt
     2641 cgcctggcac aagcaccgag ccttccatta atacgcgcgc gctgcggctc atgatggctt
     2701 ttttgacggt ccattgaccg ttgatgtttt ctgcctgggc accaacgcgc agtgtgcctg
     2761 aggggtgtcc gaagcgcact gcttgcaggt caccaccgcc ggcggccaag ttcaccagcg
     2821 tgcctggaat ggccgcggca gtgccaatgg caacggctgc tgtgcccatc atcgcgtggt
     2881 gca
//
LOCUS       DATBNL010000127         2063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_190615, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000127 DATBNL010000000
VERSION     DATBNL010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190615"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..177)
                     /locus_tag="VIC30_02135"
     CDS             complement(<1..177)
                     /locus_tag="VIC30_02135"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY7803222.1"
                     /translation="MHTGRAPRQSRAQDTRASLLQAAVTVFAESGLSGGSVSRIAKKA
                     NSHDRMIYYYFGNKE"
     gene            complement(180..953)
                     /locus_tag="VIC30_02140"
     CDS             complement(180..953)
                     /locus_tag="VIC30_02140"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013517177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEY7803223.1"
                     /translation="MSAFCEERVLSVHHWTDRLFSFTTTRDMSLRFSNGHFTMIGLKV
                     DGKPLLRAYSIASANYEEHLEFFSIKVPDGPLTSRLQHIEPGDTVIVGRKPTGTLLID
                     YLLPGKRLYLLGTGTGLAPYLSIVRDPETYEKFDEVIVVHGVREVAELAYRDLFTREL
                     PEHELLGDLIAGKLRYYPTVTREPFEHQGRITDLIESGKLFDDLGVPALDPAIDRAMI
                     CGSPAMLRDLKAIFEARQFNEGNTTKPGDFVIERAFAEQ"
     gene            1193..>2063
                     /locus_tag="VIC30_02145"
     CDS             1193..>2063
                     /locus_tag="VIC30_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011803623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803224.1"
                     /translation="MILGGALALSAVIGSGVADANEPIRIGEINSYKALPAFLGPYKK
                     GMELAVDQINAGGGVIGRPLELITRDDSATPGDAVRVAQALVTRDRVDVLAGTFLSHI
                     GLAVSDFARQRKVFFLASEPLTDKLVWEQGNDYTFRLRPSTYMQVAMLVPQAVAMNKQ
                     RWALVYPNYEYGQSGVETFKELMREAQPNIEFVAEQATPLGKIDAGSVTQALSDAKPD
                     AIFNMLFAADLAKFVREGNTRGLFDNVEVVSLLTGEPEYLDPLKDETPDGWLVTGYPW
                     YGIQTPEHEAFLAA"
BASE COUNT          483 a          544 c          585 g          451 t
ORIGIN      
        1 ctctttgtta ccgaagtagt aatagatcat gcggtcatgc gaattggctt ttttagcgat
       61 gcgcgagacg ctgccgccgc ttagacctga ctcggcaaac accgtgacag cagcctgcag
      121 caggctagcc cgggtgtctt gggccctcga ttgacgcggg gcgcggccag tgtgcatgtt
      181 cactgctcgg caaatgcccg ttcaatgaca aagtcaccgg gtttggtggt gttgccttcg
      241 ttgaactgac gtgcctcgaa gatggcttta aggtcgcgca acatggctgg gctgccacaa
      301 atcatggcac gatcaatggc cggatcgagt gccggcacac ccaagtcgtc aaacagcttg
      361 cctgactcaa tcaagtcggt gatgcgcccc tgatgctcaa agggctcgcg ggtcacagtc
      421 gggtagtacc gaagtttgcc ggcaatcaga tcgccgagca gttcatgttc aggtagttcc
      481 cgggtaaaga ggtcgcgata ggccaattcg gcaacttcgc gtacaccgtg cacaacgatg
      541 acttcgtcaa atttctcata ggtctctggg tcgcgcacaa tgcttaggta gggtgccaga
      601 ccagtgccgg tgcccaacag ataaagacgc ttgcctggta gcaaatagtc gataagcaac
      661 gtgccggtgg gtttgcgacc gacgataacc gtgtcaccgg gctcaatgtg ttgcaagcgc
      721 gaggtcagtg ggccatcagg tactttgatg ctgaagaact cgaggtgttc ctcgtaattg
      781 gcgctagcaa tgctgtaggc gcgcaagagc ggtttgccgt cgactttcag accgatcatg
      841 gtgaagtgac cgttactgaa tctaagcgac atgtcacgcg tggtcgtaaa agaaaacagt
      901 cgatcggtcc agtgatgaac actcaataca cgttcttcgc aaaatgcact cattcagaca
      961 tccagaaaaa tgacagataa caaccagcct gcaaaccaca ggcgctacag caacaacttg
     1021 ctatttagcg ccttgcgcaa gcctgtccaa tggactacag tagaaatgta gcagttgcta
     1081 cattttttag ctttaatcta acgcaatcaa tccacaccgt tactttaacc gcttcggtca
     1141 ggcagcaaaa aaacaaacca agccatttca ggagatagat caagtgttac gcatgattct
     1201 tgggggtgcg ctcgccctat cagctgtgat tggctcgggt gtcgccgatg ccaacgagcc
     1261 gattcgtatc ggcgagatca acagctacaa agcattgcct gcgtttttag ggccctataa
     1321 aaaaggcatg gaactcgctg tcgatcagat caatgccggg ggtggtgtga ttggccgacc
     1381 actcgagctc atcacgcgcg acgatagtgc cacgccgggt gatgcggtgc gggtggccca
     1441 ggcactggtg acacgcgatc gggtcgacgt cttggcaggc acgttcttgt cgcacatcgg
     1501 cttggcggtg agcgactttg caagacaaag aaaagtcttt tttctggcaa gcgagccgct
     1561 gactgacaag ctcgtctggg agcagggcaa cgactacacc ttccgtttgc ggccgtcgac
     1621 ctacatgcaa gtggccatgt tggtgcctca agccgtggcg atgaataaac agcgctgggc
     1681 tctggtctac cccaactatg agtacggtca gtcaggggtg gagactttca aagaactgat
     1741 gcgcgaggcg caacccaaca tcgagtttgt ggccgagcaa gccaccccgc tcggcaaaat
     1801 cgatgccggt agcgtgacgc aggcgctctc ggacgccaaa ccagatgcga tctttaacat
     1861 gctgtttgcc gctgaccttg ccaagtttgt gcgcgaaggc aacacccgcg gcttgtttga
     1921 caacgttgaa gtggtgagct tgctcaccgg cgaacctgag tacctggacc ccttaaagga
     1981 cgaaacgccc gacggctggt tggtcacagg ttacccgtgg tatggcattc agacgcctga
     2041 gcacgaggcg tttttagcgg cgt
//
LOCUS       DATBNL010000128         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161132, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000128 DATBNL010000000
VERSION     DATBNL010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161132"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /gene="mutL"
                     /locus_tag="VIC30_02150"
     CDS             <1..815
                     /gene="mutL"
                     /locus_tag="VIC30_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018573227.1"
                     /note="This protein is involved in the repair of
                     mismatches in DNA. It is required for dam-dependent
                     methyl-directed DNA mismatch repair. Promotes the
                     formation of a stable complex between two or more
                     DNA-binding proteins in an ATP-dependent manner without
                     itself being part of a final effector complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HEY7803225.1"
                     /translation="QSRLSLNEPRPSVGPTSNPGWGAGWQSAHAPTSTATTTGTATAA
                     GIPTNQTGAGQATQGDGRENNTEYTTEANNETVWPLGRALAQLHGIYILSQTQDGLIL
                     VDMHAAHERVVYEQLKTALDARSVATQGLLVPLVVNVSETEVALTQEHGQALAQMGFE
                     VHAAGPQSIMVRSVPALLVRGDIESLVRGILHDMAEVGVSALLTEQRNQLLSTMACHG
                     AVRANRQLTIAEMNALLRQMEQTERADQCNHGRPTWLSWRLADLDRLFMRGQ"
     gene            812..1750
                     /gene="miaA"
                     /locus_tag="VIC30_02155"
     CDS             812..1750
                     /gene="miaA"
                     /locus_tag="VIC30_02155"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEY7803226.1"
                     /translation="MNADDLPLLCLAGPTAAGKSAVCQVLAEHLPIEIINVDSATIYR
                     AMDIGTAKPSATEQATVTHHLLDILDPAQSYSAAQFRHDAMRCVAQIRARGHIPLLAG
                     GTMLYFKVLRDGIDDLPDADPQCRADISARAQALGWPALHQTLAKVDPVTAARLAPND
                     SQRIGRALEIYETSGQPMSALIGLQANTRMPVKLISLEPSDRQVLHNRIERRFDQMLE
                     NGLVQEVRQLFERGDLNPELPSMRCAGYRQIWQHLAGQSSLIEAREQGIAATRQLAKR
                     QLTWLRSMPDRHVVDSLSNNAGEQVLAQVQAALNRG"
     gene            complement(1786..>2217)
                     /locus_tag="VIC30_02160"
     CDS             complement(1786..>2217)
                     /locus_tag="VIC30_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HEY7803227.1"
                     /translation="NAKPEDRFENGTLGDAVMAPTRIYVKQVLAALVQFGLAIKGLAH
                     ITGGGLLDNVPRILQPGMQAQLHASAWPMPALFEWLQQAGGIDSQEMYRVFNCGIGMV
                     LVVDAEQASAITTFLADQGEQVYMLGQIQACDSEAVQTVVA"
BASE COUNT          519 a          669 c          601 g          428 t
ORIGIN      
        1 tgcagtcccg tttatcgctc aatgaaccgc gcccaagcgt tggccccacg agcaaccccg
       61 gctggggagc cgggtggcaa tccgcccatg cgcctacatc aaccgccaca acaaccggca
      121 cagcaaccgc tgcaggcata ccaacaaatc agaccggcgc gggtcaagct acacaagggg
      181 atgggcgtga aaacaacact gaatacacca ctgaagccaa caacgagacg gtctggccat
      241 tgggtcgggc actggcgcag ttgcatggca tctacattct gtcgcaaacc caagatgggc
      301 tcattctggt ggacatgcac gccgcacacg agcgggtagt gtacgaacag ctcaagacgg
      361 ctttggacgc gcgtagcgtg gccacacagg gcctactcgt gcccctagtg gtcaatgtct
      421 ctgaaaccga ggtggcgtta acccaagaac acggtcaagc cttggcgcaa atgggctttg
      481 aagtgcatgc cgccgggccc caatcgatca tggtgcgctc ggtgccagct ttgctggtac
      541 gaggggatat cgagtcattg gtgcgcggga tcttgcatga catggctgaa gtgggcgtga
      601 gcgcattgct gaccgaacaa cgcaaccaac tgttatcgac catggcctgc cacggtgcgg
      661 tgcgtgccaa tcgccagctc accatcgcag agatgaatgc cctattgcgc caaatggagc
      721 aaacagaacg tgccgatcag tgcaatcatg gtcgcccaac ctggttgtcc tggcgactcg
      781 ctgaccttga ccgtctgttc atgcgcggcc aatgaacgcg gatgacctac cactgctgtg
      841 cctagccgga cccacagcgg ccggcaaaag cgctgtatgt caggtactgg cagaacattt
      901 acccattgaa atcatcaatg ttgattcggc caccatctac cgcgccatgg atataggcac
      961 agccaaaccg agcgccacag aacaagccac ggtgacccat cacttgctcg atattctcga
     1021 cccagcacaa agctattcag cggcgcagtt tcgccacgat gcgatgcgat gcgtggcgca
     1081 aatccgtgcg cgtggccaca tcccattgct cgccggtggc accatgctgt atttcaaagt
     1141 gttgcgcgat ggcattgatg atttgcccga tgctgacccg caatgccggg cagacatctc
     1201 agcgcgcgcg caggcacttg gctggcctgc tctgcatcag acgctcgcga aggtagatcc
     1261 tgtcacggcg gcaagacttg cgcccaatga cagccaacgc atcggccgag ccctagagat
     1321 ttatgaaacc agcgggcaac ccatgtctgc cctgatcggg cttcaggcca atacacgcat
     1381 gccggtcaag ttaattagcc tagagcccag tgaccgccag gtcctgcaca accggataga
     1441 gaggcgattt gatcaaatgc tagagaacgg gttggttcaa gaagtgcgac aactctttga
     1501 acgcggtgac ctaaaccctg agttgccttc gatgcggtgt gctggctatc ggcaaatctg
     1561 gcaacacctg gctggtcaat cctccttgat cgaggcgcgc gaacaaggca ttgctgccac
     1621 gcgtcagttg gctaaacgac aactgacttg gctcagaagc atgcccgatc gccacgtggt
     1681 tgatagcctt agtaacaacg ccggtgaaca agtgctcgct caagtccaag cggcactgaa
     1741 cagaggttaa atcgataagc acaccactgc gacaaaccgc cttcgttaag ccacgacagt
     1801 ttgcaccgcc tctgaatcgc aggcctggat ctgacccaac atgtagacct gttcaccttg
     1861 atcagccaag aatgtcgtaa ttgcactagc ttgttcggca tcgaccacaa gcaccatgcc
     1921 gatgccgcaa ttaaagaccc gatacatttc ttggctgtcg atgccaccgg cttgctgcaa
     1981 ccactcaaag agtgccggca ttggccaagc gctcgcgtgc aactgcgcct gcatccctgg
     2041 ctggaggatc cgtggcacgt tgtccagcaa gccaccgcct gtgatgtgcg ctaggccttt
     2101 gatcgccagg ccaaactgca ctaacgcggc caatacctgc ttgacataaa tgcgcgtggg
     2161 cgccatcaca gcatcgccaa gcgtgccgtt ctcaaatcga tcttcaggct tggcgtt
//
LOCUS       DATBNL010000129         2313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_111225, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000129 DATBNL010000000
VERSION     DATBNL010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111225"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VIC30_02165"
     CDS             complement(<1..642)
                     /locus_tag="VIC30_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017453013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY7803228.1"
                     /translation="MLERFQSNRHALGIAFMIPAGVLLIGLLAYPLGLGTWLGFTDAR
                     IGRPGVWIGFENFKYLITDSVTQLVIFNTLFYTIVASILKFVLGLWLALLLNKHLPFQ
                     SFFRAVVLLPWIVPTALSAIAFWWIYDSQFSVISWTLMRMGLIDEYINFLGDPWAARW
                     SVVAANVWRGIPFVAISLLAGLQTISPSYYEAASIDGASPWQQFRFITLPLLTP"
     gene            complement(765..2084)
                     /locus_tag="VIC30_02170"
     CDS             complement(765..2084)
                     /locus_tag="VIC30_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008111846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY7803229.1"
                     /translation="MSQFTRRKFIGTGAAVAGAAAFGGYSPFLAAQTPSLSYTPEPGA
                     KLRVLRWKRFIQGDEEQFLANIAAFTKKYGVEVRVDNEGWEDVRPKAAVSANVGSGPD
                     IIMGWFDDPFQYPDKLLDMTELCTYLGNKYGGWYDVSEQYGTLDGRWISVPWAIIGNA
                     LVYRDSHIKAAGFDTMPTDTDGFLKLCQAMTAKGTPAGFALGKAVGDGNNWVHWLLWS
                     HGGRLVDENSNVVVDSPEVIAALEYGAELYKTFVPGTLSWQDPNNNKAFLDGQISLTA
                     NGISVYVAAKNSEDPRLQAMAPDIEHAHFPIGPVGRPMELMQITQMMLFAYTKYPNAS
                     RELARWLMEGEQYNPWLEKSIGYGAQTLKAYAANPIWKDPKATIYGEAPAFMTYHGYS
                     GPLGAASAGALADYIVLDMVAEASSGNRTPKEAAKRAAERAKRYYRT"
BASE COUNT          587 a          661 c          563 g          502 t
ORIGIN      
        1 gggcgtcaaa agcggcaaag tgataaaccg aaactgctgc caaggcgatg caccgtcaat
       61 cgaggcggcc tcgtaatagg aaggagagat cgtctgtaag cccgccaaca gtgagatagc
      121 cacaaacggt atgccacgcc agacattggc agcaaccacc gaccagcgcg ctgcccacgg
      181 gtcacccaga aaattaatgt attcgtcaat caagcccatg cgcatgagcg tccaactgat
      241 caccgaaaac tgggaatcgt atatccacca aaacgcaatc gcgctcagtg ccgttggcac
      301 aatccagggc aaaagcacca ctgctctaaa aaacgattgg aacggcaggt gtttgtttaa
      361 cagtagcgcc aaccataggc caagcacaaa cttcaggatg ctagccacaa tggtgtagaa
      421 aagcgtgttg aagatcacca actgcgtcac gctatcggta attaaatact tgaagttctc
      481 aaatccgatc cacaccccgg gacgcccaat gcgagcgtcg gtaaacccca accaagtgcc
      541 caaccctagc gggtatgcca ataacccgat caataagaca ccggccggga tcataaacgc
      601 gatacctaag gcatggcgat tggactgaaa acgttctagc aaggacagcg atttcattgg
      661 acgctcaact cagtggggcg gctctgaacc cgggactgaa gtccagagcc gcgatcgggc
      721 atacaccaac gttggcagtt acgccacact actcatcaaa cgcatcaagt gcggtaatac
      781 cgtttggccc gttcagcggc acgcttggcg gcctctttgg gggtgcggtt accacttgat
      841 gcctcggcca ccatgtcaag cacaatatag tcagccaaag ccccggctga ggcggcaccc
      901 aaaggaccgg aatagccgtg ataggtcatg aaggccgggg cttcaccgta aatggttgcc
      961 ttggggtctt tccagatcgg attggccgca taggctttaa gggtctgcgc cccatagcca
     1021 atcgatttct caagccacgg gttgtactgc tcaccctcca ttaaccacct cgccagctca
     1081 cgcgatgcgt tggggtactt ggtgtaggca aatagcatca tctgcgttat ttgcatcaac
     1141 tccatcggtc gacccaccgg cccaatcggg aaatgcgcgt gctcaatgtc tggtgccatg
     1201 gcctgtaagc gtggatcttc cgagttttta gcggcgacat agaccgaaat accgttagct
     1261 gtcagactga tttgaccgtc caggaacgct ttgttgttgt ttggatcctg ccaagaaagc
     1321 gtgccgggca caaaggtttt atagagctca gcaccgtact caagcgcggc aatcacttct
     1381 ggtgaatcga ccactacatt gctgttctca tcaacaaggc ggccaccgtg agaccacaaa
     1441 agccaatgca cccagttatt accatcgccc acggctttgc ccagcgcgaa cccggctggt
     1501 gtgcccttgg ccgtcatggc ttggcacaac tttaggaatc catcggtgtc ggtgggcatg
     1561 gtgtcaaacc cggccgcttt gatgtggctg tcacgataga ccaaggcatt accaataatg
     1621 gcccacggta cagaaatcca cctgccatcc aacgtgccgt attgctcaga cacgtcatac
     1681 cagccaccgt acttgttgcc aagataggtg cacagttccg tcatgtccaa aagcttgtcc
     1741 ggatactgaa acggatcatc gaaccagccc atgattatgt ccggaccgct accgacgttg
     1801 gcgctgactg ccgccttggg acgaacatcc tcccagcctt cgttgtcgac acgcacttcg
     1861 acgccatact ttttagtaaa ggcagcaata ttggccagaa actgctcttc atcgccctga
     1921 ataaaacgct tccaccgtaa tacccgcaac ttcgcaccgg gctctggtgt ataggacaag
     1981 cttggggttt gggctgctag aaaagggctg tagccaccga aagcggcagc accggccacg
     2041 gcagcacccg taccaataaa cttacgtcga gtaaattgac tcattgtttg tctcctctgg
     2101 tttgtcacga cttacttttt atttttgcta cagcagttac taaggtttat gaccgtttgt
     2161 tgcgacggtt tttgcttcag tttcatgcca cggtttcaca catgattccc atgcctaggt
     2221 gtcacgcatt gccaccacga ccaaaagaac gaaaaaactt accaccttgc tgcgtcgtta
     2281 ctatccgctg aacagcctac ctatcaatct aaa
//
LOCUS       DATBNL010000130         1748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_180867, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000130 DATBNL010000000
VERSION     DATBNL010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180867"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1479
                     /locus_tag="VIC30_02175"
     CDS             <1..1479
                     /locus_tag="VIC30_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007834614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY7803230.1"
                     /translation="HESFAAPTSMFLRNLMSMDTEEMLKAQPMDAVVLIGGCDKTVPA
                     QLMGAASAGLPAIQLVTGAMLTGSHRGERVGACTDCRRYWAKFRAQDIDEAEVSDVNN
                     QLVPSVGTCSVMGTASTMACVAEALGMTVPGCASPPAVTADRIRVAEETGRQAVEMAR
                     TGLTIDKILTPAAFENALRVLLAIGGSTNAIVHLTAIAGRMGLEMDLPALDRMGRETP
                     VLVDLKPSGEHYMEDFHAAGGMATLLRELKPLLNLEALTVTGRTLGEEIDSAGPAFAQ
                     DVVRAMDKPIYPQGGLAVLFGNLAPGGAIIKQSAASPELMEHEGRAVVFENVEDLANR
                     IDSDELDVTAKDILVLKQIGPKGAPGMPEAGYMPIPKKLARAGVKDMVRISDGRMSGT
                     AFGTIVLHVTPESAVGGPLAYVKTGDRIRLSVTDRTLSLLVSDQELAQRAKDMPVHDP
                     LSEPTAKRGYRQLFLQQVLQADEGADFAFLKAVESTGKVPRS"
     gene            complement(1500..>1748)
                     /locus_tag="VIC30_02180"
     CDS             complement(1500..>1748)
                     /locus_tag="VIC30_02180"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY7803231.1"
                     /translation="ALAIYIRTRPVATAMGGLLSAVGYATVLWAMTQAPMALVSATRE
                     TSVLFAALLGVWFLKERLTARQWMGAVVIVIGLIGLRL"
BASE COUNT          370 a          454 c          544 g          380 t
ORIGIN      
        1 catgagagtt ttgcggcgcc caccagcatg ttcttgcgca acctgatgtc catggatacc
       61 gaggagatgt taaaggccca gcccatggat gccgtggtgc tgatcggtgg ctgcgacaaa
      121 accgtgccgg cgcagttgat gggcgcagcc tccgcgggtc tgcccgctat acaactggtc
      181 accggtgcca tgctcaccgg tagtcatcgt ggtgagcgag taggggcctg caccgattgt
      241 cgtcgctatt gggccaagtt cagggcacaa gacatcgatg aggcggaagt ttctgatgtg
      301 aacaaccagc tcgtgccaag cgtgggcact tgttcggtga tgggcacagc gagcaccatg
      361 gcttgtgtgg ccgaagcgct aggcatgacc gtgccaggtt gtgcttcgcc accggcggta
      421 actgccgatc gaattcgggt tgccgaagag actggacgcc aagcggtcga gatggcacgc
      481 acaggtttga ccattgacaa gatattgacg ccagccgcgt ttgagaatgc cctgcgggtg
      541 ttgttagcca taggtggttc gaccaatgcg atcgtgcact tgactgccat tgctggtcgt
      601 atgggcttag agatggatct tccagcactc gatcgcatgg gtcgcgaaac ccccgtgttg
      661 gtggatctaa aaccgtccgg tgagcattac atggaagatt tccatgccgc cggcggcatg
      721 gcgactttgt tgcgtgaact caaaccgctt ttgaatctcg aggcattaac agtaaccggt
      781 cgcacactgg gcgaagagat tgacagtgcg ggcccggcgt ttgcccaaga tgttgtgcgt
      841 gcgatggaca agccgattta cccccaaggg ggtctagccg tgctctttgg caatttggcg
      901 cctggcggcg ccatcatcaa gcaatcggcg gctagccctg agttgatgga gcatgagggc
      961 cgcgccgttg tgtttgagaa cgttgaagac ttggccaatc gcatcgacag tgatgagctc
     1021 gatgtcactg ccaaagacat actggtgtta aagcaaattg gcccgaaagg tgcgccaggc
     1081 atgccagagg ccggttacat gccgattccc aagaaacttg cgcgtgctgg tgttaaagac
     1141 atggtgcgta tctctgacgg gcgtatgagt ggaaccgcat ttggcacgat tgtcttgcat
     1201 gtcacccctg agtcggcggt tggcggccca ttggcatacg ttaaaaccgg cgaccgaatt
     1261 cggttgagtg tgaccgatcg cacgctgtct ttgttggtgt cagaccagga gcttgctcag
     1321 cgggctaaag acatgccggt gcacgacccg ttgtcagaac ccactgccaa gcgtggctat
     1381 cgacagttgt tcttgcagca ggtgttgcaa gccgatgagg gggctgactt tgcgtttttg
     1441 aaagctgttg agtcaacggg gaaggtgccg cgcagttagt attgctgctg ctacgacgct
     1501 taaagccgaa gtccaatgag cccaatgacg atgacaaccg cacccatcca ttggcgtgca
     1561 gtcagacgct ctttgagaaa ccaaacgcct aagagtgccg caaataaaac cgatgtttca
     1621 cgggtggctg acaccagtgc catgggcgct tgggtcatgg cccagagtac cgtggcgtag
     1681 cccacggcag acaataaccc gcccatggcc gtggcaaccg ggcgggttcg tatgtagatt
     1741 gccagcgc
//
LOCUS       DATBNL010000131         5362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_121168, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000131 DATBNL010000000
VERSION     DATBNL010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5362
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121168"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1513
                     /locus_tag="VIC30_02185"
     CDS             <1..1513
                     /locus_tag="VIC30_02185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803232.1"
                     /translation="LSGLLIGAHAQEPVTEDFLSPTQVTLRSTLESWKLPNDDRVGML
                     GLNALVNVHPRFKLGIGAYSAVTGDYAGLMTFGFTGEFEQPISDKWRLRAGVFAGGGG
                     GAAGEDLTGIGFMLRTDAGVTYSLGSYGNVGLGWSWVTFPSGEIRTGQPYLMYEYPFY
                     SAAHSGWSTQSAGVGSNLPAQRQELSLGWNYYIVPDSVTDGAGGEQGNMEVAGVRWTS
                     YLNDRWFASIQADGSYTSSTSGYTQLLGGIGYRLPLGASTGIKLYAQAGAGGAGNNVI
                     DTGGGFIWGAGIALQQMLSENWAIEIGAGGLKAGSGDFKAWTLGANLTYVFGTPKVSS
                     AAPLKQPLVGYQSAPLQLRVVNQTFFRGDDQWRNNDNIASVNNFGLAVDYYLNQNAFL
                     TAQGLVAYTGNSRSADVTAASELTGLLGAGWHQPLSKHWFAEVQGLLGASVGGTMDTG
                     NGAVWQANASIGYQFTRNLSLSVSGGRMQAFDGQFKTNILGVSLGYRFGVPAR"
     gene            complement(1545..1970)
                     /locus_tag="VIC30_02190"
     CDS             complement(1545..1970)
                     /locus_tag="VIC30_02190"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY7803233.1"
                     /translation="MTDTLSRITDWFEALTPQTLASIDAVYAADAHFKDPFNDVVGID
                     DIRKIYAHMFENLTNPRFVITRTIEQTAPEHEAFVAWQFRFDWRGRAFDIPGGTRFVL
                     NDQGLVVDHVDYWDVAELYERLPLLGSLLKPLRKRMAAM"
     gene            complement(2005..2805)
                     /locus_tag="VIC30_02195"
     CDS             complement(2005..2805)
                     /locus_tag="VIC30_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008443354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803234.1"
                     /translation="MFSSLFKPLNPRIENWTDRRVWIVGASSGIGAALATALLDAGAK
                     VAISARSQDKLTALADGHPKGANALVVPFDVTNTDAWPQAAERVFTSLGDLDVVVLGA
                     ARYDPQHSWNLDMDQVRASYELNVISMYEAVKQVTPRLLAQRSGAIAVMGSISGYTGL
                     PRAIVYGATKSALQNFTETLYFELAPKGIGVYLISPGFVQTPMTANNDFEMPGLMTPP
                     AAAKAILDGMARGQFEIRFPRGFANGLRWVSRLPYRWRFPLLHRATKQ"
     gene            complement(2893..3468)
                     /locus_tag="VIC30_02200"
     CDS             complement(2893..3468)
                     /locus_tag="VIC30_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016832826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3833 domain-containing protein"
                     /protein_id="HEY7803235.1"
                     /translation="MKLKVMFASMSAALLTACGSVDVSTYADQKPALDLPTFFSGEMD
                     AWGIFQKRGGELVRRFHVEITGTWESPEKGVLDERFTYADGEKQRRVWTLTKQADGTW
                     RGTADDVVGEAIGKVAGNALHWKYTLELPVDGKVYEVKFDDWMWQMDENTMMNRSTMS
                     KFGFDLGEVTLFFKKREADAVVDAVASENPK"
     gene            complement(3465..4727)
                     /locus_tag="VIC30_02205"
     CDS             complement(3465..4727)
                     /locus_tag="VIC30_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019560657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803236.1"
                     /translation="MTRQWPLAAYSALALPLAMAMLPIYMMAPKYYSDSLGVSLTALG
                     ITLFAVRLIDTAQDPLLGRLVDWLAKFKRGWAVLMTAAAVVLAAGFALLFLPTVTGQT
                     PLLIWLAVSLVLVYTAHSCMNVCYLAWGARLTDDEAGRARVTGWREASGMIGVVLASV
                     LPVVWIAQLGETTGYQVFAVVFAVLLALGLFVTLLGSPKPILATPAERPAWRVALKSP
                     RIRRLYWFYLFNATSAAIPATLILFFVDDVLQATGQAGLFLGVYFLAGLATLPLWVRY
                     SDKVGKVRAWGVGAVMASVALMGAALLGVGDIWAYVLVCAISGAALGADLALPPAMLA
                     DAITPTQRANTGLYFGVWALVAKFSLALAAGAALPLLGTLGYVPGEPSTAGVLSVLYA
                     VLPVAFKLVAAWIIWPTTAQTQPMESLS"
     gene            complement(4724..>5362)
                     /locus_tag="VIC30_02210"
     CDS             complement(4724..>5362)
                     /locus_tag="VIC30_02210"
                     /inference="COORDINATES: protein motif:HMM:NF027363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016872 - intramolecular lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chalcone isomerase family protein"
                     /protein_id="HEY7803237.1"
                     /translation="LSPHPGQHRNQHTSGCNSTHKAAQQRLIAVMVSLVLAAGASIYT
                     ATSSASNNASTAAANGTVQPAWASFLPKAGEVGSGEFRWWGFLVYEATLYSPRGEYQP
                     GDAFALSLRYARDVSRDDIVEASIDQMRDLGLPVSRHPEWKAKLDQVMASVKSGDTLT
                     GVYTPDQGAVFFHNDKLTGQVSESLAKAFFAIWLDPKTSEPKLRQALLGQTQ"
BASE COUNT         1274 a         1580 c         1395 g         1113 t
ORIGIN      
        1 gctgtctggc ctgctaattg gcgcacacgc acaagagccc gtcacagaag attttttgtc
       61 accaacacaa gtgacgctgc gaagcacgct ggaatcttgg aaactaccca acgatgaccg
      121 cgtcgggatg cttgggctga acgctttagt gaacgttcac cctagattca aactcggcat
      181 cggcgcctac tcagccgtga ccggagatta tgccggacta atgacctttg gttttaccgg
      241 tgagtttgag caaccaattt cagacaaatg gcggctgcga gccggcgtct tcgccggtgg
      301 gggcggaggt gccgccggcg aagacctgac gggcatcggt tttatgcttc gcaccgatgc
      361 cggtgtgacc tatagccttg ggtcgtacgg caatgtcgga ctaggatggt catgggtgac
      421 gtttccgagc ggagaaattc gcactggcca gccctacttg atgtacgagt acccgtttta
      481 cagtgcggca cacagcggtt ggtctacaca aagtgctggc gttggtagca acctgcccgc
      541 gcaacgccaa gaactgtctc taggctggaa ttactacatc gtgcctgact ctgttaccga
      601 tggtgctggt ggtgaacaag gcaacatgga agtcgcaggt gtgcgttgga cgagttatct
      661 caatgatcgc tggtttgcca gtattcaggc cgatggctcc tatacctcga gcacgtctgg
      721 ctacactcag ttattaggtg gtatcggtta tcgccttcct ttgggagcaa gcaccggcat
      781 caaactctat gcgcaagctg gcgccggtgg cgcgggtaac aacgtcatcg atacaggcgg
      841 cggctttatc tggggtgcag gcatcgcgtt gcaacaaatg ctcagcgaaa attgggccat
      901 cgaaatcggg gcaggcgggc tcaaagccgg cagtggcgat ttcaaagcgt ggacccttgg
      961 tgcgaacctg acttatgtgt ttggaacccc aaaagttagt agtgctgcgc cgcttaagca
     1021 gcctttggtt ggctaccaga gcgcaccgct gcagctgcgt gttgtgaacc agactttttt
     1081 caggggcgac gatcagtggc gcaataatga caatatcgcc tcggttaata actttggact
     1141 agcggttgat tattacctca atcaaaacgc cttcttaact gcgcagggct tagtagccta
     1201 cacaggcaac agccgatctg ctgacgtgac cgctgcttct gaattgaccg gcctgttagg
     1261 cgcgggatgg catcaaccgc tatcaaagca ctggtttgct gaagttcagg gcctgttggg
     1321 tgcatctgtt ggcgggacca tggacacagg taacggcgca gtttggcaag ccaacgcctc
     1381 aatcggttat caattcaccc ggaacctctc actaagcgtc tcaggcggcc gtatgcaggc
     1441 gtttgacgga caatttaaaa ccaatattct cggtgtctct ttaggctatc gattcggtgt
     1501 gccggctcgg taggtcaagt gattagtaga ttttcactgt caacctacat cgcggccatg
     1561 cgtttgcgta gcggcttgag caagctgccc aacagcggca gccgctcata gagttcggcc
     1621 acgtcccagt agtccacatg gtcaaccacc aagccctggt cattgagcac aaagcgcgtt
     1681 ccacccggga tgtcaaaggc gcgaccacgc caatcaaacc tgaactgcca ggccacaaat
     1741 gcttcgtgtt ccggcgcggt ctgctcgatc gtgcgcgtaa taacaaacct tgggttggtc
     1801 aggttctcaa acatgtgggc gtatatcttg cggatatcat caatacccac cacatcgtta
     1861 aacggatcct tgaaatgcgc atcagcggca tacaccgcgt caatcgaggc aagcgtctgc
     1921 ggggttaagg cctcaaacca atctgtgatt ctggacaacg tgtctgtcat gcgagaccct
     1981 ttttaaaaac cccaaccggt gaagctactg cttcgtggca cgatgcaaca gcggaaagcg
     2041 ccagcgatag ggcaggcggc tgacccagcg caagccattg gcaaaccctc tggggaaacg
     2101 aatctcaaac tgcccacgtg ccatgccatc aaggatggcc ttggccgccg ccggtggtgt
     2161 catcaacccg ggcatctcaa agtcgttatt ggccgtcatc ggtgtttgca caaaccccgg
     2221 gctaatcaaa taaaccccaa tgcctttggg ggccaactca aagtacaagg tttcagtgaa
     2281 gttctgtaac gctgatttgg tcgcaccgta cacaatggca cgtggcagcc cggtgtaacc
     2341 cgagatgcta cccatgaccg caatcgcacc gctgcgctga gccaatagtc tgggcgtgac
     2401 ttgcttgacc gcttcataca tgctgatgac gtttagctcg tagctggccc tgacctgatc
     2461 catgtccaga ttccaggaat gttgcgggtc gtaacgtgcc gcaccgagca ctaccacgtc
     2521 cagatcgcct aggcttgtga acacccgctc tgcagcctgt ggccaggcat ccgtgttggt
     2581 cacatcaaac ggcactacca aggcgttagc acccttggga tgcccatctg ccaaggcggt
     2641 cagtttgtcc tggctgcgcg ctgagatcgc cactttggca ccggcatcca gcaaagccgt
     2701 tgccaaggct gcaccgatac cgcttgaagc cccaacgatc cagacacgac gatcggtcca
     2761 gttctcaatg cgagggttca agggtttaaa aagcgagctg aacatgactg tcctttgttt
     2821 gcactatcgt ttttggtgtt gttaatactg ttgaccgtac tgctaaccgc aatgctggtt
     2881 gcaatgtcgg tttcactttg ggttttcact ggccaccgca tcgaccactg catcggcctc
     2941 gcgcttttta aagaacaacg tgacctcacc aagatcaaac ccgaacttgg acatggttga
     3001 acgattcatc atggtgttct cgtccatctg ccacatccaa tcatcaaact tgacctcata
     3061 gaccttgccg tcaactggca actctagggt gtacttccaa tgcagggcgt tgccggcaac
     3121 tttaccgatg gcctcaccca ccacatcgtc ggccgtgcca cgccacgtgc catcggcctg
     3181 cttggtcagg gtccagaccc ggcgctgttt ctcaccatcg gcatacgtaa agcgctcatc
     3241 aagcacacct ttctcaggac tttcccaagt accagtgatc tccacatgaa agcgccgtac
     3301 cagctcacca ccccgttttt gaaagatgcc ccaggcatcc atttcaccgc taaagaaggt
     3361 cggcaaatcc aacgcaggtt tctgatcggc gtaggtcgac acatcaacac tgccgcaagc
     3421 ggtcaacagc gcagcactca ttgaggcaaa catgactttg agtttcatga caacgactcc
     3481 atcggttggg tttgggcagt ggtgggccaa atgatccacg ctgccacgag tttgaacgcc
     3541 acaggtagca cggcatacaa caccgacagc acacccgcag ttgatggttc gccgggcaca
     3601 tagcccagcg tcccaagtaa gggcaaggcg gcacccgcgg ccaatgccaa tgagaatttg
     3661 gccaccagcg cccagacgcc gaaatacaag ccggtattgg cgcgttgggt tggcgtgatg
     3721 gcatcagcca acatggctgg cggcagcgcc aagtccgccc ccaaggccgc accactgatg
     3781 gcgcaaacca acacgtaggc ccagatgtca cccacaccta acaaagcagc acccatgagc
     3841 gccacactgg ccatcaccgc ccctacaccc caggcacgca ctttgccaac cttgtccgag
     3901 taacgcaccc acagtggcaa ggtcgctaaa ccagccaaaa agtacacccc taaaaacaaa
     3961 ccagcttggc ctgtggcctg caaaacgtca tccacaaaaa acagaatcaa tgtcgccgga
     4021 atcgccgctg acgtggcgtt aaacaaataa aaccagtaca gcctgcgaat gcgtgggctc
     4081 tttagtgcca cgcgccaagc cgggcgctca gcaggggttg ccagaatggg cttgggtgaa
     4141 cccagcaacg tcacaaacaa cccgagtgcc agcaacaccg caaacaccac cgcaaagacc
     4201 tgatagcccg tggtttcacc aagctgcgcg atccaaacga ccgggagcac tgacgccaat
     4261 accaccccaa tcattccact ggcttcacgc caaccagtca ccctcgctcg ccccgcctca
     4321 tcatcggtca gacgcgcgcc ccaggccaga taacaaacat tcatgcagct gtgtgcggtg
     4381 taaaccagca ctaggctgac agccaaccag atcaacaacg gcgtttgacc cgtgacggtc
     4441 ggtaaaaaca gcagtgcaaa gccagctgcc agcaccacgg cagcagcggt catcagaacc
     4501 gcccagccac gtttaaactt cgcgagccaa tcgaccagac gacccagcaa tgggtcttgc
     4561 gcggtatcga ttagccgaac cgcaaaaagt gtgatgccca atgcggtgag actcacgccc
     4621 aaactgtcgc tgtagtactt gggcgccatc atgtaaatgg gcaacatcgc catggccaaa
     4681 ggcaacgcca aggcgctata agccgccaat ggccattggc gtgtcactgt gtctgcccca
     4741 aaagcgcctg acgcagtttc ggttcagagg tcttagggtc taaccaaatc gcaaaaaatg
     4801 ccttggccaa ggattcactg acctgacccg ttaacttgtc gttatggaaa aaaaccgccc
     4861 cttgatctgg cgtatacacc ccagtcaatg tgtcaccgga tttgaccgag gccatgacct
     4921 ggtcaagctt ggctttccat tccggatgac ggctaaccgg caacccgaga tcacgcatct
     4981 ggtcgatcga ggcctcgaca atgtcgtcac gcgatacatc acgcgcgtat ctcagactca
     5041 atgcaaacgc gtcgccaggc tggtactcac cgcgcggtga gtacagcgtg gcctcataga
     5101 ccaggaaccc ccaccagcga aactcaccac tgccaacttc accagccttg ggtaaaaaag
     5161 acgcccaagc gggttgcacg gtgccatttg ctgcagcagt tgatgcatta ttggatgcac
     5221 tactcgttgc tgtataaatc gaggcaccag cagccaaaac cagactgacc atcaccgcga
     5281 tcagcctctg ttgggcggct ttgtgcgttg aattacatcc actcgtgtgc tggttccgat
     5341 gttgaccagg gtgtgggctg ag
//
LOCUS       DATBNL010000132         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_131175, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000132 DATBNL010000000
VERSION     DATBNL010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131175"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VIC30_02215"
     CDS             <1..441
                     /locus_tag="VIC30_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003808444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY7803238.1"
                     /translation="TVQWGGPDGMLFIGKTGTGHIAAMDGAPDGGGHNLAPRPMEMVL
                     LGTGGCTAYDVVLILKRGRHSVTGCDVALTAERADTDPKVFTKIHFAFTVTGQGLSRP
                     VVERAVKLSHEKYCSASAMLASSAEMTWSVDIVDQAAADNGDNA"
     gene            438..1232
                     /locus_tag="VIC30_02220"
     CDS             438..1232
                     /locus_tag="VIC30_02220"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015555506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEY7803239.1"
                     /translation="MNQYENFMRHVFENGVDKSDRTGTGTRSVFGHQMRFDLSEGFPL
                     VTTKKLHTRSIFVELLWFLRGDSNVNWLRDRKVTIWDEWAPDNGDLGPIYGVQWRSWP
                     APDGQKIDQISQVIEQIKTNPDSRRLIVSAWNVGQIPDMALPPCHAFFQFYVAQGKLS
                     CQLYQRSADIFLGVPFNIASYALLTHMVAQQTGLEVGDFIWTGGDCHLYNNHFDQVQE
                     QLARDPYPYPTLKIARKPDSIFEYELEDFVIENYQFHPHIKAPVAV"
     gene            1229..1738
                     /locus_tag="VIC30_02225"
     CDS             1229..1738
                     /locus_tag="VIC30_02225"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEY7803240.1"
                     /translation="MTTVSLIVAYSRNRVIGKDNQLPWKLPGALAHFKRQTVGKPIIM
                     GRKTWQSLGRPLPGRTNIVVSRSAAGLGADTLESQFAGAVVVTTIDEAFAAAGDVPEI
                     CLIGGAQLYADALDKVDRIVATEIDIEIDGDAFFPELDPAVWVETDREPQPPENNLRY
                     DFVIYQRKR"
BASE COUNT          451 a          558 c          529 g          422 t
ORIGIN      
        1 acagtgcaat ggggtggccc cgatggcatg ctgtttatcg gcaagactgg caccggccac
       61 attgccgcca tggatggcgc accagacggt ggcggacata acctggcacc acgccccatg
      121 gaaatggttt tactgggcac cgggggctgc accgcctatg acgtggtgct tattctcaag
      181 cggggacgac attcagtcac tggttgtgac gtggcattga ctgccgaacg ggcagacacg
      241 gaccccaaag tcttcaccaa aatccacttc gccttcaccg tcaccggaca agggctgtct
      301 agaccagtcg ttgagcgtgc tgtgaagctg tctcatgaga aatactgttc agcctcggcg
      361 atgctcgcaa gcagcgctga gatgacatgg tcagttgata ttgtcgatca ggcggctgca
      421 gacaacggag acaacgcgtg aaccaatatg aaaacttcat gcgccatgtg tttgagaacg
      481 gcgtggataa gtctgaccgc acaggcaccg gcacccgctc ggtgtttggg catcagatgc
      541 ggtttgactt gtctgaaggc tttccgctag tcaccaccaa gaaactgcac acccgcagca
      601 tttttgttga gctgctgtgg tttttgcgcg gcgactccaa tgtcaattgg ctgcgtgatc
      661 gcaaggtcac catctgggat gagtgggccc ctgacaacgg cgacctcggt cccatctatg
      721 gcgtgcagtg gcgctcgtgg ccagcccccg atggacaaaa gatcgatcag atcagccaag
      781 tcattgagca aatcaaaacc aacccggact cgcgccgcct gatcgtttca gcttggaacg
      841 tcggtcagat accggacatg gcactgcccc cctgccatgc gtttttccag ttttatgtgg
      901 cccaaggcaa gctgtcttgc cagctctatc agcgcagtgc cgacatcttt ctaggcgtgc
      961 cgtttaacat cgcgagctat gcactactaa cccacatggt ggcgcaacaa accgggctcg
     1021 aggtcggtga tttcatctgg acaggtggtg attgccacct ctacaacaac cacttcgatc
     1081 aggtgcaaga gcagctcgcg cgtgatccct acccctaccc cacattaaag atcgccagaa
     1141 aacctgacag tatttttgag tatgagctag aggatttcgt catcgagaac tatcagtttc
     1201 atcctcacat caaagcgccg gtggccgtat gacaaccgtt tcccttatcg tggcctacag
     1261 ccgcaatcgt gtcattggca aagacaacca attgccatgg aagctgccgg gtgctctcgc
     1321 gcactttaag cgtcagaccg tgggcaaacc cattatcatg ggcagaaaaa cctggcaatc
     1381 tttgggccgc ccactacctg gtcgcaccaa catcgtggtc agtcggtctg cggcgggttt
     1441 gggtgctgat acgctcgaaa gccaatttgc tggcgcagtg gtagtgacca ccatcgatga
     1501 ggcatttgcc gctgcaggcg atgtgccaga gatctgctta atcggtggtg cgcaactcta
     1561 cgctgacgcg ctagacaaag tcgaccgaat cgtggccacg gaaatcgaca tcgagatcga
     1621 cggcgatgcg tttttccctg agcttgaccc agctgtttgg gttgagactg atcgcgagcc
     1681 ccaaccccca gaaaacaacc tcagatacga ctttgtcatt tatcagcgca agcgctgagg
     1741 tgatctaagc aacgcaggta caagcaacac aggtctaggt caggcctaga cctgtgcgta
     1801 ctcactaacc ggcggacacg cacacacgag gttgcggtca ccaaacgcat tgtccacacg
     1861 tgccactggc ggccagtact tgttttgcaa cagtgatggc acagggaagc ccgcttcatg
     1921 ccgactgtag tcatgatgcc aatcggctgc catcaacatg
//
LOCUS       DATBNL010000133         1797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1556, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000133 DATBNL010000000
VERSION     DATBNL010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VIC30_02230"
     CDS             <1..323
                     /locus_tag="VIC30_02230"
                     /inference="COORDINATES: protein motif:HMM:NF040249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803241.1"
                     /translation="DKALADPRTFELGKRVHTQVDDNPDPNAFTPVTVTVQLTNGESH
                     QTRLDHMLASPQRPLTRQQCQNKFDQCCALAINPPVQPSDLFERIMNLASVTDVSTLV
                     HTTH"
     gene            337..990
                     /locus_tag="VIC30_02235"
     CDS             337..990
                     /locus_tag="VIC30_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803242.1"
                     /translation="MPIAGKGILITAMNVDPDHEVEFNLWYDREHIAERVAIDGFVEA
                     RRYQAVDANPKYFATYTTSAFEDLSSPAYKTALANQTAWSKTNLARAQDMIRVVGRIT
                     ASKGQGRGGALAVIRLRPDLAQATQWRQKVEALIDPGTVNGVISMHLIESDPDLSVSL
                     TEPDKPNPGASDWFVLVEGTHLSAVTELAEARFVDIGLQVISTGSYQLLWDLAKAEL"
     gene            1029..1763
                     /locus_tag="VIC30_02240"
     CDS             1029..1763
                     /locus_tag="VIC30_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006048231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7803243.1"
                     /translation="MLITGGSRGIGAATARLAATHGYQVAVNYASNEAAAQAVVKEIE
                     ALGSKAKAFKADVTKDQEVVGLFQGVDEAFGGVDVLVNNAGILETFGILDADEARLRR
                     TFEANLFSLYYCSREAVKRMSTDQGGAGGVIVNLSSAAAKLCSMPGGNAYSTSKAAVD
                     GFNLSLANEVGAQGIRVNAIRPGLIATDIQNGRGGIEVAAELAKTAVPMRRIGQPEEI
                     AQAIIWLASPAASYVHGAVLDVGGGR"
BASE COUNT          434 a          523 c          475 g          365 t
ORIGIN      
        1 gggacaaagc gcttgccgac ccgcgaacgt ttgagctcgg caaacgcgtg cacacgcaag
       61 tcgatgacaa tcctgacccg aatgcattta cacccgttac agtcaccgtc caactcacta
      121 acggtgagtc acaccaaaca cggcttgatc acatgctggc cagcccgcaa cggccactaa
      181 ctcgccagca gtgccagaac aagttcgacc aatgttgtgc cttagccatc aacccacctg
      241 ttcaaccatc agacttattt gagcgcatca tgaacttggc atcggtgacg gatgtcagta
      301 cgctcgtgca tacaacccat taaaggacca aacatcatgc ccatcgccgg caaaggtatt
      361 ctcatcaccg ccatgaacgt ggaccccgac catgaagtgg aatttaatct ttggtatgac
      421 cgcgaacaca tcgcagagcg cgtcgccatt gacggttttg ttgaggctcg ccgttatcag
      481 gccgttgatg ccaaccccaa atattttgcg acctacacca cgtctgcatt cgaagaccta
      541 agcagtccag cctacaaaac cgcattggcc aaccaaaccg cgtggtctaa aaccaacctg
      601 gcacgtgcac aagacatgat ccgcgtggtg gggcgcatca ccgcctcaaa aggtcaaggt
      661 cgtggtggcg cgctcgctgt gattcggctg cgccccgatc ttgcgcaagc gacgcaatgg
      721 cgtcagaagg tcgaggcgct aatcgatcct ggcaccgtca atggcgtgat ttccatgcac
      781 ttaatcgaaa gcgatccaga tctgtcggtg tctctgaccg aaccggacaa acctaacccg
      841 ggtgccagtg actggtttgt cctggtcgaa ggcacgcacc tgtccgctgt aaccgaactg
      901 gccgaggcta gattcgttga catcggactt caagtgatct caactggcag ctaccagttg
      961 ctctgggatc tggccaaagc cgaactctaa cgtacacaca aactggaaaa tccgtgaaac
     1021 aaaaaaccat gctcattaca ggaggcagtc gcggcatcgg cgctgccacg gccagactcg
     1081 ccgctaccca cggctatcag gtggcagtta actacgccag caatgaagct gccgcacagg
     1141 ctgtggttaa ggagatcgag gcgcttggct caaaagcgaa ggcttttaaa gctgatgtca
     1201 ccaaagatca agaggtcgtg ggtctgttcc aaggagttga tgaagcattt ggtggtgttg
     1261 atgtgctggt caacaacgcg gggatcttag agacgtttgg cattctagat gccgatgaag
     1321 ctcgcctgcg tcgcacattc gaagccaatc tatttagcct ttattactgc agccgtgagg
     1381 ccgttaaacg gatgtcgacg gaccagggtg gcgcaggcgg cgttatcgtt aacctgtcgt
     1441 cggctgcggc caaactttgt tccatgccag gcggcaatgc ctactccaca tccaaagcag
     1501 cggtcgatgg ctttaacctc tcacttgcca acgaagttgg tgctcagggc attcgcgtga
     1561 acgccatccg tccaggacta atcgccactg acatacaaaa cgggcgcggt ggcattgagg
     1621 tagcagcaga gctcgccaag accgccgtac caatgcgacg catcggccaa cccgaggaga
     1681 ttgcccaggc cattatttgg cttgcctcac cagcagcctc ttacgttcac ggtgcggtgc
     1741 tcgatgtcgg cggcggacgc taaccgcaaa gcggtcactg accgcatgcg cgggctg
//
LOCUS       DATBNL010000134         3593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_71305, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000134 DATBNL010000000
VERSION     DATBNL010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3593
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71305"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1316)
                     /locus_tag="VIC30_02245"
     CDS             complement(153..1316)
                     /locus_tag="VIC30_02245"
                     /inference="COORDINATES: protein motif:HMM:NF024996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY7803244.1"
                     /translation="MKKTLLAAALLTGFAGAASAQNSVTLYGVVSVGMKYQSITSPDG
                     TQFDGGKTSLSRFEMESGQQSGSRWGLKGVEDLGNGLKASFVYESGVNVTNGSSTGFT
                     RQATLALDSNSWGGFQFGRAMSPGTVAFSGIDPFGASFGTSSLTSSQGNTFVRYSNMI
                     QYSTPNMSGFKGLFGYSFNPAVSSNSAGNGFETNNKNRVASAGLRYANGPILVAGIFD
                     YMYSNDLNPAESVTDTNIKSWTVGGTFDFKVAKVHGSYGQNIDGILGSSDLDANILSD
                     DGPTNAASGALFYKGARTQSWMLGLSAPVGAAGKVFAGVQQRIAGGDFDENIVLEDGT
                     TIETATMTTASIGYTYGFSKRTNLYAYYSYQQNVSNLKGADSNMVGVGLRHLF"
     gene            complement(1580..2587)
                     /locus_tag="VIC30_02250"
     CDS             complement(1580..2587)
                     /locus_tag="VIC30_02250"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004067 - asparaginase activity [Evidence
                     IEA];
                     GO_process: GO:0006528 - asparagine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HEY7803245.1"
                     /translation="MATTSPKPRIAIVATGGTIASTAGDSAQLADYQVSTGVENLITA
                     VPGLTDVADLTFDQVCNIESHQIDDSVLFRLARSVQAFCDRDDIDGVVITHGTDTLEE
                     TAYFLHLTIDTRKPVVMVGAMRPASALSADGTLNLFHAVIVAAKQRSEGKGVLVVMND
                     RIASARHVVKGHANSVDAFVPTEFGYLGLVYGRWVQYLGDVVLPHTSASDFKRAFENA
                     GRALPAVDIIMDHQGASVHQYEAAIEAGVKGIVLAATGQGSLSPQATQGSRVAKKAGV
                     LVVRSTRVWQGVVRPSEKDVVHGTLAAFTLGPSKARVLLRLALTQSTTHRAIQDWFAA
                     Y"
     gene            complement(2787..2871)
                     /locus_tag="VIC30_02255"
     tRNA            complement(2787..2871)
                     /locus_tag="VIC30_02255"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2835..2837),aa:Leu,seq:gag)
     gene            complement(2905..3357)
                     /gene="secG"
                     /locus_tag="VIC30_02260"
     CDS             complement(2905..3357)
                     /gene="secG"
                     /locus_tag="VIC30_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEY7803246.1"
                     /translation="MPIEFTILLVVQIIAAFSIIVLVLLQQGKGADMGSAFGSGSAGS
                     LFGATGAANFLSRMTKWAAVVFFLTTIGLAYMANSGGQEEDTGIMESFQPVPTIPAAP
                     GALPAGSGSEGTTVPAVPSVPSVPSAPDTSSNAVPASEDAANGTNSNN"
     gene            complement(3515..>3593)
                     /locus_tag="VIC30_02265"
     CDS             complement(3515..>3593)
                     /locus_tag="VIC30_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013212055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEY7803247.1"
                     /translation="MDDIDGGLIGGASLVASDFLTIARA"
BASE COUNT          946 a          984 c          865 g          798 t
ORIGIN      
        1 gttcaaacgt gactaaatac aaaaaggctt gaacacaagg cacgtcgcta ctgagagacc
       61 tcggcatctc tctattacaa aactactgcc cacaaaaaag cccccgaggg ggcttttttg
      121 ctgtctaaga caatcggcta agccgaccga aattagaaca agtgacgcag accaacacca
      181 accatgttag aatcagcacc cttcaagttt gacacgtttt gctggtacga gtagtacgcg
      241 tacaagttcg tgcgcttcga gaaaccatag gtgtaaccga ttgaagcggt tgtcattgtg
      301 gctgtttcaa tcgtcgtgcc atcttcgaga acgatgtttt cgtcaaagtc accaccagcg
      361 atacgctgtt gaacaccagc aaagacctta ccggcagcgc cgacaggtgc tgacaaacca
      421 agcatccatg actgggtacg tgcacctttg tagaacagag caccagaggc tgcgttcgtg
      481 ggaccatcat cgctcaggat gttggcatca agatcgcttg aaccaaggat accgtcgatg
      541 ttttgaccgt aagaaccgtg aaccttggca actttgaagt caaaggtacc accaacagtc
      601 catgacttga tgttcgtgtc agtgaccgac tcagctgggt tcagatcgtt tgagtacatg
      661 taatcaaaaa taccagcgac caagatagga ccgttggcgt aacgcaaacc ggcagaagcc
      721 acacggttct tgttgttggt ctcaaagccg ttaccagcag agttagagct cactgctggg
      781 ttaaacgaat aaccgaacaa gcctttgaag cctgacatgt taggcgttga gtactggatc
      841 atgtttgagt aacgcacaaa ggtattgcct tgtgagcttg tcaatgatga tgtgccgaac
      901 gacgcgccga aaggatcgat acctgagaag gcaaccgtac ccggtgacat tgcgcgaccg
      961 aactggaaac caccccatga gttgctatcc aatgccaaag tggcctgacg ggtgaagccc
     1021 gtgcttgaac cgttggtgac gttaacgccg ctttcataaa cgaagctagc tttcaaaccg
     1081 ttgccgagat cctcaacacc tttcaaaccc caacgtgaac cgctttgctg gcctgattcc
     1141 atttcgaagc gtgacagtga agtcttacca ccatcgaatt gcgtgccgtc tggtgacgtg
     1201 atcgactgat acttcatacc aacagacacc acaccgtaca gtgtgactga attttgtgcc
     1261 gaagcggcgc cggcaaagcc ggtcagcagg gcggcagcga gcagagtctt tttcatttaa
     1321 gaatctccaa tgattttgag tgacaagagc aacacacaac gggcttgttg tttgcgcccc
     1381 cctaactccg ctaagggaag ttggtgttat tgcatcaaat ttcgggccgt ctggctatga
     1441 aagcatggcg taaacgctag ttttccggga tttgtgttgg aatcgcgcaa catttgtggt
     1501 tttttacaca cacttttcac tctaagctaa gtaattcggt cagctggatc ggtggcatcg
     1561 aaagcacttc ttttgtagat caataagcag caaaccagtc ctgaattgct ctatgagttg
     1621 tagattgtgt gagcgccaaa cgcaagagaa cccgcgcctt ggacggtccc aaagtaaacg
     1681 cagctagggt accgtggacc acatctttct cagagggacg caccacgccc tgccaaaccc
     1741 gggtcgagcg caccaccaag acaccggcct ttttggctac gcgcgagccc tgagttgcct
     1801 gaggcgacaa actgccctgc ccagtggccg ccaatacaat gcccttgacc ccagcttcaa
     1861 tggctgcctc atattggtgc acactggcac cttgatgatc catgatgatg tcgacggctg
     1921 gcagcgctct acctgcgttt tcaaaagctc tcttgaaatc actggccgag gtatggggca
     1981 aaaccacatc gccgagatat tgcacccagc gaccgtagac caaccccaaa taaccaaact
     2041 ctgtcggtac aaacgcatcc acgctgttgg catgaccctt cacgacatgg cgagccgacg
     2101 caattcggtc attcatgacc accaacacgc ctttaccttc ggatcgttgt ttagcagcca
     2161 cgatcaccgc atgaaacagg ttcaacgtgc catccgcact tagagcggac gctggacgca
     2221 tggcacctac catgacaacc ggcttacggg tatcaatcgt taaatgtagg aagtaggccg
     2281 tttcctcaag cgtatcggtg ccgtgggtga tcaccacacc atcgatgtcg tcgcggtcac
     2341 agaaagcttg cacagagcgg gcaagacgaa acaataccga gtcatcaatt tggtggcttt
     2401 cgatgttgca tacctgatcg aatgtgaggt ctgcaacatc ggtaagcccc ggtaccgccg
     2461 ttatcaaatt ctcgacacct gtcgagacct gataatcagc caattgcgcg ctatcacccg
     2521 cagtcgaagc gattgtgccg cctgtggcca caatagcaat gcgtggtttg ggggaggtgg
     2581 tagccaaagt taaatctcct gaacgatccg cacggttagt caaatgaaac caagtttacg
     2641 cctgcgcgat cgtggcaacc caacaataca aagagaaaca aaagagagga aacaaacaaa
     2701 caaacaacaa aaaaccgcgc cagatttctc tgaaacgcgg tttcatcgct ttttcgatca
     2761 aactgctctg atcaaccttc aaacattggt gccgacggcg agactcgaac tcgcacagct
     2821 ttcgccacta ccccctcaag atagcgtgtc taccaattcc accacgtcgg caaattcgta
     2881 agaacaggat tctaacacta gagttcagtt gttcgaattg gttccgttag ccgcatcctc
     2941 agaagcgggc acagcattgc ttgaggtgtc tggcgctgac ggcaccgaag gcaccgaggg
     3001 cactgcaggt accgtagtcc cttcactgcc cgaaccggca ggcagcgcac caggcgcagc
     3061 cggaatggtt ggcacaggct ggaatgactc catgatgccc gtgtcttctt cctgaccacc
     3121 ggagttagcc atgtaagcca aaccaatggt cgtcagaaaa aacaccacag ccgcccactt
     3181 ggtcatgcgc gacaggaagt tggccgcgcc agtagcacca aacagactgc cagccgagcc
     3241 actgccaaac gctgacccca tgtcagcacc tttgccttgc tgcaaaagca ccaacacgat
     3301 gatagaaaag gcggcaatga tttgcaccac caacaaaatc gtgaactcta tgggcatttc
     3361 tgtcttactc caaaaatctg tctgttctgt ctttgtaatc tggctgtcta actaaccgga
     3421 ttgtgttctt cactcgattg atgctgcgtc agtgtctagg ctgagtctcg tccgtatctc
     3481 gcgtagatcg cgtatctcgt ggtacctatt actatcacgc acgcgcaatc gttaaaaagt
     3541 cgctggccac gagtgacgca ccaccaatca acccgccatc gatatcatcc atg
//
LOCUS       DATBNL010000135         4358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_81486, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000135 DATBNL010000000
VERSION     DATBNL010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4358
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81486"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="VIC30_02270"
     CDS             <1..801
                     /locus_tag="VIC30_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY7803248.1"
                     /translation="SQVRPKLVLRVNPRQASVQQVVDAFDAAGIDCTAIGGQAVSLAQ
                     SVAVQTLPGYAMGWWSVQDWSAQQAASLLELKDDQRVLDACCAPGGKTAHILELAHVD
                     LTALDQDAERLDRVKENLNRLKLMNDRVKLKVADAIDWQSWWDGTPYDAILADVPCTA
                     SGVVRRHPDIAWLRREADLAQTVALQIQILDALWHTLTPGAILLLVTCSVFPDEGEDQ
                     AQAFLMRHADAVRLEAPGQCLPMASGEHRQIGHDGFFYAKFQRRPKHT"
     gene            868..1434
                     /locus_tag="VIC30_02275"
     CDS             868..1434
                     /locus_tag="VIC30_02275"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEY7803249.1"
                     /translation="MTTSGIAHASEQARASVQRIEPLVVSGQLLLDVNLELKLNDRMR
                     QALSRGVPLTFSLELEINAPRWWWFDKSIVDTTLVRRLSYNTLTRIWRVTTGDFSVPA
                     ASYEEAIKLLSTVRNWPVVLTDRFEPDETYIGAVRISLDNDQLARPLQMDSARDSWTL
                     GSAWKTFDFSIRRNPSDTSDPGDTEVKQ"
     gene            1431..3728
                     /locus_tag="VIC30_02280"
     CDS             1431..3728
                     /locus_tag="VIC30_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803250.1"
                     /translation="MSRRTRLLLVLGAITGVGLFVLLAWSTGSASRLAQFHELLVYLN
                     VALALGLFGWVLGLSIKLIRQLRRNKFGARLTARFALAFALIGVLPGALIYTVSIQFM
                     SRSIESWFNVRVDSALDAGLALGREALDAQLNELDTRARALLPGFANASDPELPALLD
                     RVLEITGVREAAVITSSGRPVAFVTEKLSTLLPQGPPAGVLQRLRLSGSYASAETVSN
                     QAIEGDPSGLILRVILPLGSSAQTPGALVRSEVRWLQLIKAVPEELVMNAEEVREGYR
                     DYQELALSREGLRQLFAVTLTLALLLAVFAAMAVALFLSKRLVQPLLVLASGTRAVSI
                     GDFRPLDEPPQNDEVGQLTRSFNAMTRQLEEARRLVDMNRRQLEQSKLYTEGILANLS
                     AGVLVFDEQFRITLFNQGAQSILGVDLRSAKGRPLETVPGALPLATTIKRAFSQLAAT
                     DSERLHWQEQFDITLASDDAPDKPHTTTLLARGTHLSMDGRGNGYVVVFDDITAVISA
                     NRTVAWGEVARRMAHEIKNPLTPIQLSAERLAMKLGDRLEPNDAQLLTRATNTIVNQV
                     TSLKHMVDEFREYARKPVVVFKAVDLNHVIEEVLILYGWDPNTEASAADASGVLFESR
                     LAEGLPLVRGDQTQLRQVIHNLLSNSRDALSEQGQGGTIRVTTEQISATDNAQPAIRL
                     VVSDDGPGFSAQLLQQAFEPYVTTKSHGTGLGLAIVKKIVDEHGGYIDLSNRRDGGAR
                     ITIVLVPMESEVDDIADEDDNHGSN"
     gene            3740..>4358
                     /locus_tag="VIC30_02285"
     CDS             3740..>4358
                     /locus_tag="VIC30_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY7803251.1"
                     /translation="MARILVVDDEIGIRELLFEILYDEGHSVELAENAAQARAARQRM
                     RPDLVLLDIWMPDTDGVTLLREWGSQGLLDMPVIMMSGHATIDTAVEATRIGAVDFLE
                     KPITLQRLLKTISNGLSRDKPVVASGLADKATETSDVTQVAGSPEDAGTTAAASSTDN
                     DSPSGLSGNISLDQPLREARDEFERVYFEYHLARENNSMTRVSERT"
BASE COUNT          971 a         1167 c         1198 g         1022 t
ORIGIN      
        1 agccaggtgc gtccaaaatt ggtcctgcgg gtcaacccga gacaagcctc tgtgcaacag
       61 gtcgttgatg cctttgacgc agctggtatt gactgtaccg ccatcggtgg gcaagccgtg
      121 tcattggcgc aatcggttgc cgtgcaaacc ttgccgggat atgccatggg gtggtggtca
      181 gttcaagact ggtcagcgca acaggccgcc tccttgctag aacttaaaga cgatcagcgt
      241 gtactggatg cctgctgtgc acctggcggt aaaaccgctc acatccttga attagcccat
      301 gttgatctga ccgcattgga ccaagatgcc gagcgtcttg atcgtgtcaa agagaacttg
      361 aaccgactca agctcatgaa cgatcgcgtc aaactgaaag tggctgatgc cattgactgg
      421 caaagctggt gggatggcac accctacgat gcgatcttgg ccgatgtgcc ctgcaccgcc
      481 agtggtgtgg tcaggcgaca tccagacatc gcctggctca ggcgcgaggc agacctggcg
      541 caaaccgttg ccctgcaaat acagattctc gatgcgctat ggcacacctt gacacccggt
      601 gccatcctgt tgctagtaac atgttcggtg tttccagacg agggtgaaga tcaagcgcaa
      661 gccttcttga tgcgtcatgc cgatgccgtg cgacttgagg cacccggtca gtgtttgcca
      721 atggcatcgg gcgaacacag acaaatcgga cacgacggat ttttttatgc gaagtttcaa
      781 cgccggccta aacataccta gtctactcat atggtccttg cgcgccaact tttaacgatc
      841 tgcttgactt gggtgtgtgt cacttttatg accacatcgg gtattgctca tgccagcgaa
      901 caagctcgtg catcggtcca acgcatcgag ccgcttgtgg tgagtggcca gctcttgctc
      961 gacgtcaacc tcgagctcaa actcaacgat cggatgcgcc aagccctatc gcgtggtgtg
     1021 ccactgactt tttcactaga gctcgagatc aatgcgccac gctggtggtg gtttgacaaa
     1081 tctattgttg atacaacgtt ggtgcgcagg ctctcctaca acacgttaac gcgcatttgg
     1141 cgcgtaacaa ccggcgactt ctctgtacca gctgcatcct atgaagaggc gatcaagttg
     1201 ttgtcaaccg tacgcaactg gcccgttgta ctgacggatc gatttgagcc agacgaaact
     1261 tatatcggtg ccgtacgaat cagtttggac aatgaccagt tggctcgtcc tctgcaaatg
     1321 gatagtgcgc gagacagctg gacccttggc agcgcctgga aaacgtttga cttttctata
     1381 cgccgtaacc caagtgacac tagtgacccc ggtgacaccg aggttaagca atgagtcggc
     1441 gcacgcgatt attgctcgta ctcggtgcca tcaccggtgt gggcctattt gtgttgctag
     1501 cctggtccac cggcagtgcc tcgcggctgg ctcagtttca cgaactgctt gtttatttga
     1561 acgtggcgct agcacttggt ttgtttggct gggtgttggg gctcagtatc aaactgatac
     1621 ggcaactgcg tcgcaacaag tttggtgcac gtctgacggc ccgattcgcg ctggcgtttg
     1681 cattaattgg ggttttgccc ggcgcactga tttatacggt ctcaatacag ttcatgtcgc
     1741 gatcgatcga atcatggttt aacgtgcgcg ttgattccgc gctagacgcc ggtctggcgc
     1801 ttggtcgcga agcccttgat gcccagctca atgaactcga tacccgcgca cgtgctttgc
     1861 tgccgggctt tgccaatgcc tctgacccgg aattaccagc cctgcttgat cgagttctag
     1921 aaattactgg cgtgcgcgaa gccgctgtca tcacaagctc gggacgcccc gtggcatttg
     1981 tcactgaaaa actcagtacg ctgctgccac aagggccacc agcaggggtg ttgcaacgtc
     2041 tgcgtctgtc aggcagctac gccagtgccg agaccgtatc taaccaagcc attgaaggtg
     2101 atccgtcagg cttaatcctt cgtgttattt tgccgctggg ttcatcggca cagacacctg
     2161 gcgctctggt gcgcagcgaa gtgcgttggc tgcaattgat caaggccgtt cccgaagagt
     2221 tggtcatgaa tgctgaagag gttcgagagg ggtatcgcga ctatcaagaa ctcgcgctgt
     2281 cgcgtgaagg gctcagacag ttgtttgctg tcaccctgac cctggcacta ttgctcgctg
     2341 tgtttgctgc gatggccgtc gcgttgttcc tgtcaaagcg cctggtgcag ccgttattgg
     2401 tgctcgcatc gggtacgcgc gcggtcagca tcggtgactt ccggccactt gacgagcccc
     2461 ctcagaacga cgaggtgggt cagttgaccc gatcatttaa cgccatgacg cgccaactcg
     2521 aagaagcacg tcgactcgtt gatatgaatc gacgccaact cgagcagtca aagctctaca
     2581 cagaaggcat tctggcgaac ctgtctgctg gcgttttagt ctttgatgag caatttcgca
     2641 tcacgctctt taaccagggc gcgcagtcca ttctcggcgt tgatctcagg tcagccaagg
     2701 gacgaccttt ggagactgtg cctggtgcgt tgccgcttgc cactaccatt aaacgcgcgt
     2761 tctctcagct agcggcgacc gactctgagc gtttgcactg gcaagagcaa ttcgacatca
     2821 ccttagctag tgacgatgca cccgacaaac cacacaccac aacactgctg gcacgtggca
     2881 cgcacctaag catggatggt cgcggcaatg gctatgtggt cgtgttcgac gacataacag
     2941 cggtgatttc agccaaccgt accgttgcct ggggtgaggt cgcacgtcgc atggcccatg
     3001 aaataaaaaa cccactcacc cctattcagc tatcagctga acgactggcc atgaaacttg
     3061 gcgatcgact cgaacccaat gatgctcaat tactgactag agccaccaac acgattgtca
     3121 atcaagtcac ttcgctaaaa cacatggttg atgagtttcg cgaatacgcg cgcaaacctg
     3181 tggtagtttt taaggcggtg gatctgaatc acgtcatcga ggaagtgtta atcctatatg
     3241 gatgggatcc aaacaccgag gcatcggccg ctgatgccag cggtgttctg tttgagtcac
     3301 gtctggccga gggtctgccg ttggtgcgtg gcgatcaaac gcaactgcgt caagttattc
     3361 acaatctatt gagtaattca cgtgatgcac tcagtgagca aggtcaaggc ggtactattc
     3421 gtgtaacaac tgaacagatc agtgcaactg acaatgcaca acctgctatt agactggtag
     3481 tctctgacga tgggcctggt ttctcggcac agcttttaca acaagctttt gagccgtatg
     3541 tcaccaccaa atcccacggc acggggctag gtttagcgat cgttaaaaag atcgttgacg
     3601 aacatggtgg gtacatcgac ttgtcaaatc ggcgtgatgg cggtgcacgt atcaccattg
     3661 tgttggtacc catggaatca gaggtggacg acatcgctga tgaagacgat aatcacggca
     3721 gtaactaggt aagggaatca tggctcgaat tctggtggtc gacgacgaaa tcggtattcg
     3781 tgagttgctt ttcgaaattc tgtatgacga agggcactcc gttgaactcg ccgagaacgc
     3841 ggcgcaagca cgcgcagcac gccaacgcat gcggccggac ttggtgctgc tcgatatttg
     3901 gatgccagac accgatgggg taaccctgct gcgtgaatgg ggctcgcaag gactgctcga
     3961 catgcctgtg attatgatga gtggtcacgc caccatcgac acggctgttg aggctacacg
     4021 catcggcgcc gtggatttcc tagaaaaacc cattacattg caacgcctct taaaaaccat
     4081 cagcaatggt ttgtcgcgcg acaaacccgt ggtggcatct ggcttagcgg ataaagcgac
     4141 tgagacgagt gatgtaactc aggtggcagg ctcgcccgaa gatgcaggca caacggctgc
     4201 cgctagttca actgacaacg actcgccttc cgggctgtct ggcaacatct cgctcgatca
     4261 gccgctgcgc gaggcccgcg atgagttcga acgtgtgtat tttgagtatc acttggcccg
     4321 tgaaaacaac agcatgacac gtgtatctga acgcacgg
//
LOCUS       DATBNL010000136         2693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_180958, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000136 DATBNL010000000
VERSION     DATBNL010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180958"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VIC30_02290"
     CDS             complement(<1..210)
                     /locus_tag="VIC30_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803252.1"
                     /translation="MRQHIDLAWLRTPEHQNWVGLALSELKPALQRIEMHELAWLDGQ
                     RSDAMDSGSAPFASDDSRVLARSVVQ"
     gene            complement(299..727)
                     /locus_tag="VIC30_02295"
     CDS             complement(299..727)
                     /locus_tag="VIC30_02295"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEY7803253.1"
                     /translation="MSLIKVDVVSAERSLFEGEAKFVALPGESGELGVLPGHTPLITR
                     IRPGTLKIVLSDDTEESIFVAGGLLEIQPDHVTVLSDTAIRAADLDEAKAEEARRQAE
                     ESLRNAKDKTDIAVVQAELEMLAAQAMAARKLRGTTRGMN"
     gene            complement(737..2137)
                     /gene="atpD"
                     /locus_tag="VIC30_02300"
     CDS             complement(737..2137)
                     /gene="atpD"
                     /locus_tag="VIC30_02300"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY7803254.1"
                     /translation="MSNGTIVQCIGAVVDIQFPRDHMPHIYEALTLSDDTSAFAEKGL
                     TFEVQQQLGDGVVRTIALGGTDGLRRGMAVAKTGAPISVPVGTGTLGRIMDVLGRPID
                     EAGEIQCDERRAIHQAAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVG
                     KTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEP
                     PGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPT
                     LAEEMGVLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASL
                     GIYPAVDPLDSTSRQLDPHVVGEEHYNVARGVQQTLQRYKELRDIIAILGMDELSPED
                     KQAVARARKIQRFLSQPFHVAEVFTGSPGKYVPLSETIRGFKMIIDGECDALPEQAFY
                     MVGSIDEAFEKAKTIQ"
     gene            complement(2199..>2693)
                     /locus_tag="VIC30_02305"
     CDS             complement(2199..>2693)
                     /locus_tag="VIC30_02305"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011299474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEY7803255.1"
                     /translation="GDAPELDRLIGAIKVQMDDFIDGKVDKVYLATNRFVNTMRQEPV
                     FFRLLPLPGKLADPAAVFENPVEGVETAEEFGGQYGWDYIYEPDAKVVIDELLQRYVE
                     GVVFQAVAENMASEQSARMVAMKAASDNAKKVIGDLQLVYNKTRQAAITKEISEIVGG
                     AAAV"
BASE COUNT          650 a          794 c          646 g          603 t
ORIGIN      
        1 ctgaacaaca gaacgagcta gcacccggct gtcatcgctg gcaaatgggg cgctccccga
       61 gtccattgcg tctgaccgtt ggccatctaa ccacgcgagc tcatgcattt caatgcgctg
      121 cagagctggc ttgagctcag acaaggccaa tcccacccag ttttggtgtt ctggcgtacg
      181 taaccaagcc aaatcaatat gttgtctcat gcgattctcc taaaacgaaa gccctgtagc
      241 gtaccgacta cagggctttg tttctattcg gagttatcac attgtggaga ttactcggct
      301 agttcatccc gcgggtcgta ccgcgcaact tacgcgcagc cattgcctgg gcagccaaca
      361 tctcaagctc agcctgaacc acagcaatat ctgtcttgtc tttggcatta cgcaacgact
      421 cttcagcctg acgacgagct tcttcggcct tcgcctcatc aagatcagca gcacgaatag
      481 cggtgtcaga caacacagtc acatggtctg gctggatttc gagcaaacca cccgctacaa
      541 atatcgactc ttccgtatca tcggacaaca caatctttag cgtgccagga cgaatccgag
      601 tgatcagcgg cgtatgaccc ggcaacacgc cgagttcgcc cgactcacct ggcagagcca
      661 caaacttggc ctcgccttca aagagggacc tctcagcgct gacaacgtca actttgatca
      721 agctcatgtc gcttccttat tgaatcgtct tggctttttc gaaggcctcg tcgatagaac
      781 ccaccatgta gaaagcctgt tcgggcaatg catcgcactc accatcgatg atcatcttaa
      841 agccgcgaat ggtctccgac agaggcacgt acttacctgg cgaaccggta aagacctcag
      901 caacgtggaa cggctgtgac aggaaacgct gaatcttacg tgcacgtgcc acggcttgct
      961 tgtcttcagg tgacagctca tccatcccca gaatcgcgat aatgtcacgc aactctttgt
     1021 agcgctgcag cgtttgctga acgccacgag ccacgttgta gtgctcttca cccaccacgt
     1081 gcggatcgag ctgacggcta gttgagtcaa gcggatcaac agcaggataa ataccgagcg
     1141 atgcaatatc acgcgaaagc acaacggttg agtccaagtg ctggaaggtc gttgcaggcg
     1201 atgggtcggt caaatcgtca gcaggcacgt agacggcctg gatggaagtg atagagccgg
     1261 tttgcgtcga tgtaatgcgc tcctggagca cacccatttc ttcagccaac gttggctggt
     1321 agcccacggc tgagggcata cgaccgagca gtgctgaaac ctcagtaccg gcgagcgtat
     1381 aacggtagat gttgtcgaca aagaacagaa tgtcacggcc ttcgtcacgg aatttttctg
     1441 ccatggtcaa accggtcaaa gccacacgca aacggttacc cggtggctcg ttcatctgac
     1501 cgaacaccat ggccactttg tcgagaacgt tggactcttc catttcgtga tagaagtcgt
     1561 taccttcacg agtacgctca cccacgccgg caaacacaga caaaccactg tgctgcttag
     1621 cgatgttgtt gatcagctcc atcatgttca cggtcttgcc cacaccggca ccaccgaaaa
     1681 gaccgacttt accgcctttg gcaaacgggc aaaccaagtc aatcaccttg ataccggttt
     1741 caagcaattc aaccgatggt gacaactcat caaacttcgg tgcggcctgg tgaatggcgc
     1801 gtctctcatc acactggatc tcgccagcct catcgatggg acgaccaagc acatccatga
     1861 tgcgacccaa cgtccctgta ccaaccggca cagaaatcgg tgcaccggtt ttagccacgg
     1921 ccataccacg acgcaagcca tcagtgccgc ctagcgcaat ggtacgcacc acaccgtcgc
     1981 caagctgctg ctgtacctcg aacgtcaagc ctttttctgc gaaggcgctc gtgtcatcgg
     2041 acaaagtcag tgcttcataa atgtgcggca tatggtcacg ggggaattga atatcaacca
     2101 ctgcgccgat acattgaacg atggttccgt tgctcatttg atttccttac tcgatcactt
     2161 atagcgttgt acggacaggc ttgctgccag acgtgttttt acacggcggc ggcgcccccc
     2221 acgatttccg aaatttcttt ggtgatggca gcttgacggg tcttgttata gaccagttgc
     2281 aaatcaccta taaccttctt ggcattgtct gaggcagctt tcatggctac catgcgagca
     2341 gactgttccg aagccatgtt ctcagcaact gcctgaaaaa caacgccctc aacatagcgt
     2401 tgcaatagct cgtcgatgac aaccttggcg tctggctcgt atatatagtc ccagccatac
     2461 tgccccccga actcttcagc cgtctccacg ccctcgacgg ggttttcaaa gaccgccgct
     2521 ggatcagcga gctttccagg caacggcagc aaccggaaaa aaaccggctc ctgacgcatc
     2581 gtgttgacaa accgattggt ggccagataa accttgtcaa ccttgccgtc aataaagtca
     2641 tccatttgca ctttgattgc accaatcagc cggtcaagct caggcgcatc ccc
//
LOCUS       DATBNL010000137         1928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21687, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000137 DATBNL010000000
VERSION     DATBNL010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21687"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(224..1870)
                     /locus_tag="VIC30_02310"
     CDS             complement(224..1870)
                     /locus_tag="VIC30_02310"
                     /inference="COORDINATES: protein motif:HMM:NF006052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY7803256.1"
                     /translation="MSQHYTSSHALIESLHVAGVDRAFLVPGESYLGVLDAMVDFPGL
                     DVVTCRHEAGAGFMALADGRLTNRPGVALVSRGPGASNAAIAVHTAQQDAIPFILLIG
                     QVAEQDLRREAFQEIDYHKMFGDIAKWVFECRHPDQLGATAAKAVRVATSGTPGPVVI
                     VLPEDIQQQPAQKLTTPLTRQIAGIPASETLNEIRDAITKAKRPLILAGGVFEQPGGR
                     EALQAFAESFDIPVVVTFRRQDLFDNYHPLYGGNMGLANPPEQMALLEQTDLLLALGT
                     RLGDITTQNYAFPTYARTAQTFLHAHPDSRVIGWDTAADFPLICDPIELVRALTAQAT
                     ANRNVDPQWLNAWQTFREQYMAWPAFEQRSDGIEFAAVIKAISDTADERLTFCLDAGT
                     FAAPVYRHVPFTPGRRLMSPLSGAMGYGTPAAMACALRDPTREVVCLVGDGGMLMTGQ
                     EMILAVERKLPVLMVISSNSTYGSIRKHQEQHYPDRVCGTSLFNPDFVAMAQSFGMPG
                     WRIHSEDQIQETLQAARDHIRNKGGPALIDVQTNLKAVKG"
BASE COUNT          413 a          504 c          570 g          441 t
ORIGIN      
        1 attttgttag catcgctacg ggctttggga ttcctgctgt acgggtggag aatgccgtcg
       61 atatcaaagc agcggtagct gctgccattg ccagcggtaa accaagcctt gtcgaggtcg
      121 tgatcgacaa cggctattag aaggagaaag gtgcaggagt taagacaggg gctttagccc
      181 ctgtctcgca tccttaacct ttcatctttt aagctcggat cacctaacct ttaactgctt
      241 tgaggttggt ttgcacgtca atgagggcag ggccgccttt gttgcgaatg tggtctcggg
      301 ctgcctgcaa ggtttcttga atctggtctt cgctgtggat gcgccagcca ggcataccaa
      361 agctttgtgc catggccaca aagtccgggt taaagagact ggtgccgcac acgcggtcag
      421 gatagtgttg ctcctgatgt ttgcgtatgg acccgtaggt gctgttggac gagatcacca
      481 tcagaacggg tagtttgcgc tcaaccgcca agatcatctc ttggccagtc atgagcatgc
      541 caccatcacc gaccaagcac acaacttcgc gtgtggggtc acgtagcgca caggccatgg
      601 cggcaggcgt cccatagccc atggcaccag acaaaggtga cattagacgc ctgccgggtg
      661 taaacggcac gtggcggtac accggtgccg caaaggtacc cgcatcaaga caaaacgtca
      721 gtcgctcatc agcggtgtcg ctgatggctt tgatgactgc ggcgaactcg atgccgtcgc
      781 tgcgttgctc gaacgccggc catgccatgt attgttcacg aaacgtttgc caagcgttta
      841 accattgggg atcaacgttt cggttggcgg tggcttgtgc tgtcagtgcc cttacgagtt
      901 cgattgggtc acaaattagc gggaagtcag ctgctgtatc ccacccgatc acccggctat
      961 cggggtgggc gtgtaaaaaa gtttgtgcgg tgcgcgcata cgtgggaaac gcgtagttct
     1021 gtgtggtgat atcacccaag cgcgtgccca aggccaataa aagatcggtt tgctcaagca
     1081 aggccatctg ctcgggcggg ttggccaaac ccatgttgcc gccgtaaagc gggtggtaat
     1141 tgtcaaatag gtcttggcgg cgaaacgtca ccaccaccgg gatgtcgaaa gactcggcaa
     1201 aggcttgcaa tgcctcacga ccgcctggct gttcgaacac gccaccggct agtatcaatg
     1261 gtcgcttggc tttagtaatc gcatcgcgaa tctcgttgag cgtctcagaa gcaggaatac
     1321 ctgcgatttg acgcgtcaat ggcgtggtca acttttgtgc cggttgctgt tgaatatctt
     1381 ctggcagcac aatgaccacc ggccctggcg tgccggaggt ggccacacga accgccttgg
     1441 ctgcggtggc accgagttgg tcagggtggc ggcattcaaa cacccatttg gcgatgtcgc
     1501 caaacatttt gtggtaatcg atttcctgaa atgcctcgcg gcgcaggtct tgttcggcga
     1561 cctgaccgat caacaaaata aaggggattg catcttgttg tgcggtgtgt acggcaatgg
     1621 cggcgtttga ggcacctggg ccgcgactca ctaacgccac gcctgggcgg ttggttagac
     1681 gcccatcggc tagtgccata aaccccgcac cagcctcgtg tcgacacgtc acgacatcga
     1741 ggccggggaa gtccaccatg gcatccagta caccgagata actttcgcct ggcacgagaa
     1801 aggcacgatc gacgccggca acatgtaatg attcgatcaa tgcgtgactt gaggtgtagt
     1861 gctgcgacat ggtcagtaag gttccgttga aggttgctta ggctcaagtt gttcagggcg
     1921 tgcgacta
//
LOCUS       DATBNL010000138         3499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_51643, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000138 DATBNL010000000
VERSION     DATBNL010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51643"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VIC30_02315"
     CDS             <1..370
                     /locus_tag="VIC30_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY7803257.1"
                     /translation="VVTDGGFRDSNEIALLGIGAYHQRPSAPTNLTLHEAIDINVPIG
                     CGDAPVFPGDVIVGDADGVIVIPSEIADEVAIEAADMTVFEDFVMISVKHGKSILGLY
                     PPTDPKTLEEFDAWKKEHGF"
     gene            complement(412..487)
                     /locus_tag="VIC30_02320"
     tRNA            complement(412..487)
                     /locus_tag="VIC30_02320"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(452..454),aa:His,seq:gtg)
     gene            511..1968
                     /gene="cls"
                     /locus_tag="VIC30_02325"
     CDS             511..1968
                     /gene="cls"
                     /locus_tag="VIC30_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008808 - cardiolipin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0032049 - cardiolipin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEY7803258.1"
                     /translation="MDEIHRILAEYWPHIVLTLSLVASVSTAIHAAMTKQDVRAAIGW
                     VAVVIFSPLLGATFYLFAGINRVRRQRVSEQRKLAEQERDRLQRMQVENLPAGFDDHI
                     KPLCRLGDSINGHVLLKGNQIKLLAGGDQTYTAMIDAIESAKHAVALQSYIFDHDGIG
                     LRVAQALIDAKARGVNVRVLIDAVGAKYSHPPITGMLTEAGVSVGLFLPTAIGLRLVY
                     ANMRSHRKLLVVDGSRALTGGMNIRQAFMREFAGDAVAVDTHFSVTGPICDHLMDSFA
                     HDWEFTTGERLEGGTWFAKFDAAQATQGIPIRAVLSGPDREVGRNQSMLLGALSVARH
                     RVRIQSPYFLPEPVLLGALVAAARLGVRVDVVIPANNNLKLVSAAMEAQLEQLLQGGV
                     NVWRAQGAFDHSKLMTVDDQWCYVGSSNVDPRSQRLNFELDLEVYDRGLAEQIAQTID
                     HKIEHGQRATLAELANRPFWLRLRNRFVWLASPLL"
     gene            complement(1985..2731)
                     /locus_tag="VIC30_02330"
     CDS             complement(1985..2731)
                     /locus_tag="VIC30_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007856187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803259.1"
                     /translation="MSSDVAAAFAPTGTLRASINIGNAVLARAEGESAAGVSVDLAHE
                     LAKCLGLPIELQVFKTAAESVSAVESGQADVGFFAVDPKRGEHIAFTSPYVLIEGAYM
                     VRDGSPITQNEQVDAAGNRVMVGQGSAYDLYLSRHLTEAQIVRAASSQAVVQTFLDSD
                     VEVAAGVKQQLQADSQIHPGLRLLPGRFMVIRQAMGMAKTRDPKAIAFLRQFVEDMKV
                     AGYIGLALARHGIEGAGVAPASDPKADPLA"
     gene            2967..>3499
                     /locus_tag="VIC30_02335"
     CDS             2967..>3499
                     /locus_tag="VIC30_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803260.1"
                     /translation="MSTTTANPPFSYKVILVGTLFVLLAMGTRATFGLFMQPMGLHHG
                     WSRDVFSMAFAFQNITWGLGAIAAGMMADKFGSARTVALAAGLYAIGLIGTRLASTEL
                     ELYLTAGVLVGLGQAGTTFAVILPVIARSVPVSYRSTAMGIAGAGGSLGQFLVVPTGQ
                     VLIDTLNWTGAYWVLSL"
BASE COUNT          715 a          890 c         1036 g          858 t
ORIGIN      
        1 ggttgtgacc gatggtgggt ttcgtgattc caatgagatt gcattgctag gtattggtgc
       61 ttaccatcaa cgcccaagcg caccgacgaa cctaacgctg cacgaggcga ttgatatcaa
      121 tgtgcccatt ggttgtggcg atgcgccggt gtttccgggc gatgtgattg tgggtgacgc
      181 tgacggggtc attgtgatcc cgtctgagat agccgatgaa gtggccatcg aagcagcaga
      241 tatgacggtg tttgaggatt tcgtgatgat tagcgtcaaa cacggcaaat cgattcttgg
      301 cttgtatccg ccaaccgacc caaaaacatt agaagagttc gacgcttgga aaaaagagca
      361 cggtttttaa gaacacggct tttaaataca cggcttttga tcaagcagtg ttggggtggc
      421 tgacgggact cgaacccgcg acaaccggaa tcacaatccg ggactctacc aactgagcta
      481 cagccaccaa aggacgtaga tattaacatg atcgatgaga tccaccgaat tttagcggag
      541 tattggccgc acattgtgct cacgttgtcg cttgtagcca gcgtctcgac ggccatccat
      601 gccgccatga ccaagcagga cgtgcgtgcg gccattggct gggtggcggt ggtgattttt
      661 tcgccactgt taggcgctac attctattta ttcgccggca tcaatcgggt acgtcgtcaa
      721 cgcgtgagcg aacagcgcaa actcgctgaa caagagcgcg atcgcctgca gcgcatgcaa
      781 gtcgagaatc tgccagcggg gtttgatgac cacatcaagc ctttgtgtcg gttgggtgac
      841 agcatcaatg gacatgtgct tctgaaaggc aaccaaatca aactgcttgc cggtggtgac
      901 cagacctata cggccatgat tgatgcgatc gaatcggcca aacatgccgt ggctttgcaa
      961 agctatattt ttgatcatga tggcattggg ctcagagtgg cgcaggcttt aatcgacgcc
     1021 aaagccagag gcgtgaacgt ccgggttctg attgatgctg tcggtgccaa atactcccac
     1081 ccgccgatca ccggtatgct gactgaggcg ggggtgtcgg tggggctgtt tttacccacc
     1141 gccattggtc tgaggctggt ttacgccaac atgcgcagtc accgcaagtt attggtggtc
     1201 gacgggtctc gggcgctgac tggtggcatg aacattcgtc aagcattcat gcgtgagttt
     1261 gccggcgacg cggttgctgt ggatacgcat ttcagtgtca ctggcccgat ttgtgatcac
     1321 ctcatggaca gctttgccca tgactgggag ttcaccacag gcgagcgtct tgagggtggc
     1381 acgtggtttg ccaagtttga tgctgcccaa gccacccaag gtataccaat acgggcggtt
     1441 ctatcgggac cagataggga agtcggtcgc aatcagtcca tgttacttgg cgccttgtca
     1501 gtggcgcgtc atcgagtgcg tattcaatcg ccgtactttt tacctgagcc ggtcttatta
     1561 ggggcgttgg tagcggcagc gcgcctaggc gtgcgcgtag acgttgttat tccggctaat
     1621 aacaatctca agctagtgag cgcggccatg gaggcacagc ttgaacagct actgcaaggt
     1681 ggtgtcaatg tctggcgcgc ccaaggtgcg tttgatcact ccaagttgat gaccgttgac
     1741 gaccaatggt gctatgttgg ctcatcgaac gttgacccac gtagccagcg attaaatttt
     1801 gagcttgacc ttgaggtcta tgaccggggt ctggccgagc agatagcgca aaccatcgac
     1861 cacaagattg aacatggtca gcgcgccacc ttagccgaac tggcaaaccg cccgttttgg
     1921 ttgcggctgc gtaaccggtt cgtttggttg gcctcgccgc tgctttaagc ggcaagggtg
     1981 gtgatcaagc cagcgggtca gccttaggat cggacgctgg tgctacgcca gcgccttcga
     2041 taccgtggcg tgcgagcgct aagccgatgt atccagcgac tttcatgtct tcaacgaatt
     2101 gccttagaaa ggcgatggct ttggggtcac gggttttagc catgcccatg gcttggcgga
     2161 tcaccatgaa ccggcctggc aacaagcgca aacccgggtg aatctggctg tcagcctgca
     2221 gttgttgttt aacgcccgcg gcgacttcga catcgctgtc cagaaaggtc tggaccacgg
     2281 cttgcgaaga ggctgcacgc acaatctgag cctcagtcag gtgacgtgag aggtagaggt
     2341 cataagcact gccttgtccg accatgactc ggttgccagc ggcatcaact tgttcgtttt
     2401 gtgtgatggg actgccgtct ctgaccatat aagcgccttc gatcagtacg tacggcgagg
     2461 tgaaagcaat gtgttcaccg cgtttgggat ccaccgcaaa gaaacccaca tccgcttggc
     2521 ctgattcgac cgcgctcacg gactctgcag cggttttaaa aacctgtaac tcaatcggca
     2581 gccccagaca tttggctaac tcgtgcgcca aatcgacgga gacgccagcg gcagactcgc
     2641 cttcggctcg cgccaagacg gcgttaccga tgttgatgct tgcgcgcaag gtgccggtgg
     2701 gggcgaaggc ggcggcgacg tcagacgaca tggatagctc cttaaaaaac atgactgtga
     2761 acacgaaata ttctaggaca gagccggcgg gcttgtcctg agctcgccta gacctacaat
     2821 gcgacgatca ttcctaaaaa cctgaagtaa tttgaatcat tgcctgccgg cacgttggat
     2881 gcctgtttcg tgtccgttgc gcttgcgttg cttctccgtt gtgttttcgt ttcatttccg
     2941 ttccattcct gtttcatttc cagaatatgt cgaccaccac agccaaccca ccttttagtt
     3001 acaaagtcat tctggtgggg acgttgtttg tcttgcttgc catgggcacg cgggcgacct
     3061 ttgggttgtt catgcagccc atgggtttgc atcacggttg gtcgcgcgat gtgttctcca
     3121 tggcgttcgc gtttcagaac atcacctggg ggctcggtgc gattgccgca ggcatgatgg
     3181 cagacaagtt tggttcggcg cgcacggtgg cgcttgcggc gggcttgtat gccatcgggt
     3241 tgattggcac gcggttggcg agtaccgaat tagagctgta tttaaccgcc ggtgtgttag
     3301 tgggcctggg gcaggctggc accacgtttg ctgtgatttt gcccgtgatt gcccggtcgg
     3361 ttcctgtgag ttatcggtca accgccatgg gcattgccgg tgcgggcggg tcgttgggcc
     3421 agtttcttgt ggtgcctacc ggtcaggtgt taatcgatac cttgaactgg accggggcgt
     3481 attgggtttt gtcattgtt
//
LOCUS       DATBNL010000139         1996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_111313, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000139 DATBNL010000000
VERSION     DATBNL010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111313"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VIC30_02340"
     CDS             <1..226
                     /locus_tag="VIC30_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007585467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEY7803261.1"
                     /translation="ESDLRGEKINYKIREHSVQKVPYILVVGEKERDAGSVAMRARGG
                     VDHGVMAFETFTTLLSEDVDQHRQVSAPKD"
     gene            246..797
                     /gene="infC"
                     /locus_tag="VIC30_02345"
     CDS             246..797
                     /gene="infC"
                     /locus_tag="VIC30_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018715891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEY7803262.1"
                     /translation="MATDKPHRINGEIRVPEVRLIGLDGEQLGIVNTAEAQQMAERND
                     VDLVEIAPTAAPPVCRLMDYGKFKYQEQKRQAEARAKQKIIQVKEVKFRPGTDEGDYQ
                     VKLRNLKRFLDEGDKAKVTLRFRGREMAHQEIGMRVLERVRDDLLDLAVVEAMPKLEG
                     RQMVMVLSPKKKVAPTKADAKTS"
     gene            797..1756
                     /gene="gshB"
                     /locus_tag="VIC30_02350"
     CDS             797..1756
                     /gene="gshB"
                     /locus_tag="VIC30_02350"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006226964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEY7803263.1"
                     /translation="MHVLFIIDPLEGLKAYKDTSVAMMRALVARGHSISVAMQGDLFI
                     DCGVVKSGTRSIALHPSADLHGHGWWEYTSDRTDQPLTTFAAVVMRKDPPFDMEYVYS
                     THLLEYAQSQGARVFNHGAAIRNHPEKLSITEFASFTAPTLVTRDMARIKAFHDAQGD
                     IVVKPLDGMGGSGVFRLMNADPNRGAILEMLTQEGQRTIMAQRYLPQIVEGDKRILLI
                     GGEPVPYALARIPLAGETRGNLAAGGRGVAKPLTDRDWEIANTMAPVLYERGLLVVGL
                     DVIGDFVTEINVTSPTCFVEITEQTDFDVGKRFAIALEQAVHV"
     gene            1749..>1996
                     /locus_tag="VIC30_02355"
     CDS             1749..>1996
                     /locus_tag="VIC30_02355"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIA"
                     /protein_id="HEY7803264.1"
                     /translation="MSNAPIVVVVVVHAPLGAALKSVAEHIYGEHAQLTVIDVLPGAC
                     ADDSTGSLLARLQKLDQGSGVLMLTDLPGASPANICMRA"
BASE COUNT          481 a          467 c          573 g          475 t
ORIGIN      
        1 tgaatcggat ttgcggggtg agaaaatcaa ctataaaatc cgagaacata gtgtgcagaa
       61 ggttccatac atcctcgttg tcggggaaaa agaacgtgat gcaggttctg tcgcgatgcg
      121 agcgcgaggc ggcgttgatc acggcgtaat ggctttcgag acctttacga cgctgttatc
      181 agaagatgtt gatcaacacc gtcaagtatc agcaccaaaa gattgatttt taaggagttt
      241 tagacatcgc aactgataag ccacatcgca tcaatggtga aatccgcgtg ccagaagtgc
      301 gacttatagg attggacggt gagcagcttg gcatcgtcaa cacagcagaa gctcagcaaa
      361 tggcagagcg taatgacgtg gatctcgttg aaattgcacc gaccgctgcg ccgcccgtat
      421 gtcgattaat ggactacggc aagttcaagt atcaagaaca aaagcgacag gccgaggccc
      481 gtgcaaagca aaagatcatt caggtcaaag aggtcaagtt ccgccctggg actgacgagg
      541 gtgactacca agtcaagctt cgtaatctca agcgttttct tgatgaaggc gataaagcca
      601 aggtaacgct tcgattccga ggccgagaaa tggcacacca ggaaatcggc atgcgagtgt
      661 tagaacgtgt gcgtgatgac ctactggacc ttgccgtggt tgaagccatg cccaaactag
      721 aagggcgtca aatggtgatg gtgctttccc ctaaaaagaa ggtcgcgcca accaaggctg
      781 acgctaaaac atcatgatgc atgtgttgtt catcatcgac ccgcttgagg ggttgaaagc
      841 ctataaagac acctcagttg cgatgatgcg tgcgcttgtg gctcgtggtc attcgattag
      901 cgtggcaatg cagggtgatt tgtttatcga ttgcggtgtc gtcaagagcg gcactcgttc
      961 gattgccttg catccgtcag ctgatttaca tggtcacggc tggtgggagt acaccagtga
     1021 tcgtacggat cagccgctga cgacctttgc tgccgtggtg atgcgcaaag atccaccgtt
     1081 tgacatggaa tatgtctact cgacacacct gttagagtac gcacagtcgc aaggcgcacg
     1141 ggtgtttaat catggtgctg ccatccgcaa tcaccccgaa aaactctcga ttactgaatt
     1201 tgccagtttc actgcgccga cattagtcac acgtgacatg gcgcgcatta aggcatttca
     1261 cgacgcgcag ggcgatatcg tggtcaaacc gctcgatggc atgggtggtt ctggtgtgtt
     1321 ccgtttgatg aatgcggacc caaatcgtgg cgccatcctc gagatgctga cccaagaagg
     1381 tcagcgaacg atcatggcgc aacgctattt gccgcaaatc gttgagggcg acaaaaggat
     1441 cttgctcatc ggtggtgagc cagtgccata tgcactggcc cgtattccgc tagccggaga
     1501 gacgcgaggc aaccttgctg ctggtggccg tggcgtggct aagccgctaa cggatcgcga
     1561 ctgggaaatt gccaacacaa tggctcccgt gctttatgaa cgtgggctct tggttgtcgg
     1621 gctagatgtg attggtgact ttgtgactga gatcaacgtc acgagcccaa cctgttttgt
     1681 ggaaataaca gagcagaccg attttgatgt tggtaaacgg tttgccattg cgttggaaca
     1741 ggctgttcat gtctaatgca ccgatcgtag tcgtggttgt ggtgcatgcg ccacttggcg
     1801 ccgcgcttaa gtcagtggcc gaacatattt atggcgagca tgcgcagtta accgtgattg
     1861 atgtgttgcc aggcgcgtgt gctgatgact cgacgggtag tttgcttgcg cgactgcaaa
     1921 agcttgatca aggttcgggc gtattgatgt tgaccgattt gccgggcgct tcgcccgcca
     1981 acatttgtat gcgtgc
//
LOCUS       DATBNL010000140         2138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_31565, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000140 DATBNL010000000
VERSION     DATBNL010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31565"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            723..1400
                     /locus_tag="VIC30_02360"
     CDS             723..1400
                     /locus_tag="VIC30_02360"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7803265.1"
                     /translation="MNNQTNTSLGAFKALVVEDDRFFQEVIREGMTQAVPGSRIDLCR
                     TIQEAHLALQEHGTTFQMAIIDLGLPDGDGLSVIRELAKISPRTPIMVVSVAADERRV
                     IEAVRAGATGYVVKGDTMLSITRAIEQLLNGINPISAKLAGYFLRLAGRESPRDHAET
                     PIKRLTARELDLLREFALGKSYQEAAEAMQISLTTVQTHTRNLYRKLGVKSSLRALSK
                     AKDHGLI"
     gene            1415..>2138
                     /locus_tag="VIC30_02365"
     CDS             1415..>2138
                     /locus_tag="VIC30_02365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803266.1"
                     /translation="MQTPHCANSLQDTLAQVVMGLPFPAIVTENGPLPRPVKWLNDAF
                     VETFGYTIEDVPTVDQWFRRAYPDDAYRLELLKVWSQDVAQAFETQGVVPLRESEVHT
                     RTGEVLRVLISARALGQYLITSFIDVSQQRRAEAELRDVRHQIERTAYELTENLPVGT
                     YTMVQPPDGGLAQFRFMSTRFLALTGLTREEAYGDPLKGFACVHPDDHDRWLELNAKA
                     FSNRESFWGETRVVVNGQTRWIT"
BASE COUNT          516 a          577 c          559 g          486 t
ORIGIN      
        1 gcagctgctt gacaccctgc aggcgcatca ggcccgctag gtgcagtgcg gtgggggtta
       61 aaccatgtcg gtgagggttt agccatgtcg gtggtgtcga tggaggggcg ggtgtacatg
      121 gaaagccgcg aggttagcac caccgtttaa ccattaatca gtgttatggc gcacatggcg
      181 cactggcgca ctggcacttc ttgaaactgg gctagacgtt gatcaagact catactctga
      241 ttctacactc ttaatcggtt tttttccgat taagtatgca agatatgtgc aacaagattg
      301 gcaggcagtt ggtactcggt tggtactcag ttgctaccca ctgcttaccg ccccttcgaa
      361 cccaccaagc ccaccaagcc tgacctttag taaacggcta acttcgcttt tgtttgataa
      421 ctatcaaaca tttatgtagt actagtatgt atatgcgata gtcagaaagt tcggttacaa
      481 ctctaatact acggtttgca ccaaacaagc gcattgatga ctgagggcac gtctgaggtg
      541 acggtcggag ctacggataa gggtacaacc cgagctaaaa ccaagcatca caaaccaacg
      601 tttcccaaca ttcattgctt tgcttgctta actaactaac actgtcgtca cggttaaccc
      661 gtcatacgtc agcaaaataa tgctaaatag ggttaagtta atgtatcttt ccgagctttg
      721 tcatgaataa tcagaccaac acctcacttg gcgcattcaa ggcacttgtt gtcgaagacg
      781 accggttttt ccaggaagtc atccgcgagg gtatgaccca agccgtgccg ggcagccgga
      841 ttgatctgtg tcgcaccata caagaagctc atcttgcact gcaagagcat gggacaacgt
      901 ttcagatggc catcattgat ttgggcctgc ctgacggcga tggtctatcg gtgatccgcg
      961 aattggccaa gatctcacca cgcaccccga tcatggtggt gtctgtggcg gccgatgagc
     1021 gccgtgtgat tgaagcggtc agggccggtg ccaccggcta cgtggtcaag ggtgacacca
     1081 tgctgtcgat cacccgcgca atcgaacagc tactcaatgg cattaacccg attagcgcca
     1141 agctagccgg ttattttctg cgcttggctg gccgtgaaag cccgcgtgat cacgctgaaa
     1201 cacccatcaa gcgtctgacc gcccgagagt tagatttgtt acgcgagttt gcattgggca
     1261 agtcctacca agaagcggcc gaggccatgc agatatcgct gaccaccgtg cagacccaca
     1321 cgcgcaatct gtaccgaaag ctcggtgtaa agtcgagtct aagggctttg tccaaggcca
     1381 aagatcacgg tctaatctag ggaattgaac cagcatgcaa accccacact gcgccaacag
     1441 cctgcaagac acgctagcgc aagtggtgat gggtttgccg tttccggcca tcgtcaccga
     1501 gaatgggccg ctgccgcggc ccgtgaagtg gcttaacgac gcgtttgttg aaaccttcgg
     1561 ttacaccatc gaagacgtcc ctaccgttga ccagtggttt cgacgtgctt atcctgacga
     1621 tgcctatcgg ctcgaactgc tcaaggtctg gagtcaagac gtcgcgcaag ccttcgaaac
     1681 ccaaggcgtt gtgccactca gagagtcaga agttcacacc agaaccggcg aagtcttgcg
     1741 ggtactcatt agtgcccgcg cacttggaca atacctgatc acctctttca ttgacgtcag
     1801 ccagcaacgt cgagccgaag cagagttgcg cgatgtgcgc catcaaatcg aacgcaccgc
     1861 ctatgaatta acagaaaacc tgccggtggg cacttacacc atggtgcaac cacctgacgg
     1921 tggcttggcc cagttccgtt tcatgagtac ccggtttctg gccttaacgg gcttaacccg
     1981 cgaagaagcc tatggtgacc cattaaaagg ctttgcctgt gtgcaccccg atgaccacga
     2041 ccgctggctt gaactcaatg ccaaggcttt cagtaaccgg gaatcgtttt ggggggagac
     2101 acgggtggtg gtcaacggcc aaacacgctg gatcacca
//
LOCUS       DATBNL010000141         3295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_180990, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000141 DATBNL010000000
VERSION     DATBNL010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3295
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180990"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VIC30_02370"
     CDS             complement(<1..1052)
                     /locus_tag="VIC30_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019429895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY7803267.1"
                     /translation="MNAPLQDREAALMGMGDSRLRKEDARFIQGKGNYVDDIKLPNMV
                     FMDIVRAPLAHARIKAIHKEEALKIPGVLAVLTAEDLKPLKLHWMPTLAGDVAAVLAD
                     EKVHFQMQEVAVVVAEDRYAAADGKEAVFVEYEELEAVIDPFEALKPEAPVLREDLAG
                     KTEGAHGAREHHNEIFTWTAGDKAAADAAFDRAEVVVKQDMLYPRVHPCPLETCGCVA
                     SFDPVRGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIISPDIGGGFGNKVGIYPGYV
                     CAIVASIVLGRPVKWIEDRIENLSSTAFARDYHMTGELAATADGKIEGLRVEVIGDHG
                     AFDACADPSKFPAGLF"
     gene            complement(1089..1574)
                     /locus_tag="VIC30_02375"
     CDS             complement(1089..1574)
                     /locus_tag="VIC30_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019429896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY7803268.1"
                     /translation="MGKKLVSMNINGRKVEEAVEPRTLLIHFLREQMNLTGAHIGCET
                     SHCGACTVDIDGKSVKSCTHLAIQCDGSDVLTVEGLAQDGVLHAVQEGFYQEHGLQCG
                     FCTPGMLVRSYRLLQENPNPTEEEIRTGISGNLCRCTGYQNIVKAVQYAAKKLQETAT
                     A"
     gene            complement(1602..2468)
                     /locus_tag="VIC30_02380"
     CDS             complement(1602..2468)
                     /locus_tag="VIC30_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011488438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY7803269.1"
                     /translation="MIPPEFEYHAPTTLSDAVALLNELGDEAKVLAGGHSLLPMMKMR
                     FAEPAHLIDLNKIDQLRGIREEDGLIKIGAMTVENDILDSALLQQKASLLPKAVKLIA
                     DPQVRNRGTIGGDIAHGDPANDHPAIMKAMDATFVIAGPDGERSVKAVDFFHGTYMTD
                     MAENEILAEIHIAPLPANTGTAYVKLKRKTGDWATAAAAVVLQMDGDKVAMVRIGLTN
                     VADMALRATDAEALLVGNTLSDEVLSKVVQAVTAICDPAEDLRGDAEYKTAMAGEMTK
                     RAILQAAGKLGE"
     gene            2856..>3295
                     /locus_tag="VIC30_02385"
     CDS             2856..>3295
                     /locus_tag="VIC30_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803270.1"
                     /translation="MQPTFFDKHTNILVSAALVGLVALTMAYVNLGPASDWWSISYLS
                     ILGVGGGCFVLSRLRPQRYGFSPPHVMLSLGFGGMLIGLFADFQRTPIAIIASICSST
                     QSLSILESLKLHVELMPYMHVGMLVGGLAAIPSLRLLRPECRKL"
BASE COUNT          741 a          905 c          820 g          829 t
ORIGIN      
        1 tgaaacagac cggctgggaa tttgcttgga tcagcacagg cgtcaaatgc accatgatca
       61 ccaataacct caacgcgcag gccttcgatc ttgccatcgg ccgtagcagc gagctcaccg
      121 gtcatgtgat agtcacgcgc aaaggcggtt gaagagaggt tttcgattcg gtcttcgatc
      181 cacttcaccg gacgtccgag cacaattgag gcaacgatcg cgcacacgta acccggatag
      241 ataccgacct tgttaccaaa gccgccacca atatcaggcg agataatgcg aaccttcgac
      301 tcaggaatgc ctgagagcat tgacaccacg gtgcgcacaa catgaggtgc ctgactcgtg
      361 atataggtgg tcaagtcacc acgcaccgga tcaaacgagg ccacacagcc gcaggtctct
      421 aagggacaag ggtgaaccct ggggtacagc atgtcttgtt tgacaacaac ctctgcacga
      481 tcaaatgccg cgtcagctgc tgccttgtct cctgccgtcc aagtgaagat ttcattatgg
      541 tgctcacgcg caccgtgcgc accttcggtc ttaccggcca agtcttcgcg caggacgggc
      601 gcctctggct ttaacgcttc aaacggatca atgaccgcct caagctcttc atattcgaca
      661 aacacagctt ctttaccgtc cgctgctgca taccgatctt cagccacaac gacggcaact
      721 tcttgcattt ggaagtgaac tttttcgtca gcaagcacag cagctacgtc accggccaag
      781 gtcggcatcc aatgcaattt cagcggcttg agatcttcgg cagttaatac cgccaatacg
      841 ccagggatct taagcgcttc ttctttgtga atggctttaa tgcgggcgtg tgccagtggc
      901 gcgcgcacga tgtccataaa aaccatgttg ggcagtttga tgtcatcgac gtagttgccc
      961 ttgccttgaa taaaccgagc atcttccttg cgcaggcgtg agtcgcccat gcccattagg
     1021 gcagcttcgc ggtcctgtag aggtgcgttc atattcgtgt ctcctcgtga tagctttatc
     1081 tggtcagctt acgcagttgc agtttcttgt agtttcttag ctgcatactg cacagccttg
     1141 acgatgttct ggtagcccgt gcagcggcac aagttacccg agatgccagt gcgtatctct
     1201 tcttcggtcg gattggggtt ctcttgcagc aaacggtagc tgcgcacgag catgcctggg
     1261 gtgcagaacc cgcactgtag accgtgctcc tggtaaaagc cctcttgcac tgcgtgcagc
     1321 acgccatctt gcgccagacc ttccacggtc aacacatcac tgccatcgca ctgaatagcc
     1381 aagtgcgtac aggacttgac cgacttgcca tcgatatcaa cggtacacgc gccacaatgg
     1441 ctggtttcac aaccaatgtg agcgccggtt agattcattt gttcacgcaa aaagtgaatc
     1501 aacagggtgc gtggctcaac ggcctcttcc accttgcgcc cgttgatgtt catgctcacc
     1561 agtttcttac ccatgatgtt gtctcctgag atcttgtgtc gttattcgcc gagcttgcct
     1621 gcagcttgca ggatggcgcg tttggtcatt tcaccggcca tggccgtctt gtactcagcg
     1681 tcgccgcgca agtcttcggc cgggtcgcaa attgcggtga cggcttgaac cacttttgac
     1741 aacacctcat cagacagcgt gttgcccaca agcaaagcct cggcatcggt ggcgcgcagc
     1801 gccatatcag ccacgttggt caatccaata cgtaccatgg caaccttgtc accatccatt
     1861 tgcagtacca cggcagcggc agccgtggcc cagtcaccgg ttttacgctt taacttgaca
     1921 taagcggtac cggtgttagc tggcagcggt gcgatatgaa tctcagcgag gatttcattc
     1981 tccgccatgt cggtcatgta ggtaccgtga aagaaatcaa ccgccttgac cgaacgctca
     2041 ccatcggggc cagcgatcac aaaggtggcg tccatggctt tcataatcgc cggatgatcg
     2101 ttggccgggt caccgtgagc aatatcgcca ccaatcgtgc cgcggtttct cacctggggg
     2161 tcagcaataa gcttgactgc cttgggcaac agtgaagcct tttgctgcag caaggctgag
     2221 tcaaggatgt cattctctac cgtcatggcg ccaattttga ttagcccgtc ctcttcgcgg
     2281 attccgcgca actggtcaat cttgttcaag tcaattaagt gcgcaggttc cgcaaaacgc
     2341 atcttcatca tcggcagcaa actatggcca ccggctagca ccttggcttc atcgccaagc
     2401 tcgtttaata aagccacggc gtcactcagt gtggtgggcg cgtgatattc aaactctggc
     2461 gggatcatgc aagtctcctg ttcaacaaat gttgttgcaa tcggtgattt agtttttttc
     2521 tattatgtac taatcagtca aaataaaact gactggtaac ttctgggata acgatagacg
     2581 ctgcgcactt gtgttgtttg gtatttatcg atgtaattta gccctagtga cttgaattgt
     2641 cactacatca tagggttaac gattacaact ggcttacata ccttgattca ataggtaatc
     2701 tgccttaatc tgacgagaca ttacggatca caataaaata acagctcaat gacgggccca
     2761 agcaattcca tagttttttt taatatgcac cggcagatga cgagcatcaa gttgatgtaa
     2821 aaaacgtcgt tgattgccag cgtgaggaga cctgattgca acccacgttt ttcgataaac
     2881 acaccaacat actggtaagc gccgcactcg tgggtttggt ggcgttgacc atggcgtatg
     2941 tcaacttagg gcctgcaagc gactggtggt caatatccta cttgtccatc cttggcgtcg
     3001 gtggcgggtg ttttgtgctg tcgcgtctgc gcccacagcg ctatggattc tctcccccgc
     3061 acgtcatgct aagcctgggc tttggcggta tgttgattgg cctatttgct gacttccaac
     3121 gcacaccaat tgcaatcatc gcctcgatat gtagcagcac gcagtcgctc tcaattctag
     3181 aatcgctaaa gctccatgta gagcttatgc cgtacatgca cgtcggtatg ttggtgggcg
     3241 gtcttgccgc aattcctagc ctgcgattgc tgcgtcccga atgccgaaag cttta
//
LOCUS       DATBNL010000142         4395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21722, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000142 DATBNL010000000
VERSION     DATBNL010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4395
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21722"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1342)
                     /locus_tag="VIC30_02390"
     CDS             complement(<1..1342)
                     /locus_tag="VIC30_02390"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEY7803271.1"
                     /translation="MQSSSWSSTSQQIAVRLCHQITHLGGAAYGATLKLAAISVLGLT
                     FNSAASAQTVVAPPESFRTPEFNANWGLGAIGAEYAYSLGFTGAGIKLGIADGAFQFT
                     HPEFAGRIYYPNGFPPFPLPGLEVPEHGTHVMGTAAAARNNQGMMGVAFDASLAGVIA
                     VDDEQGYPPPGDWAGQLIAAGVSVMNGSFGPDAVPVPYFEDGTPNPDYVEIGFQALTV
                     DFVTEDLSAIKRLSEADVVMVFAAGNDHQNQPISTQFPLGAGMIPLINPERTDALQPG
                     CDLDSDALYCFLADGDPEPDENNPQTWLYEPVSAVNSIDGSPYAGALIAVVAVDQALE
                     IADFSNRCGEAADWCMAAPGVDIYATVPMSTYAGGDVWSGTSMAAPHVAGAAAVLRQA
                     FPYMTARQIIEVILTTATDLGDTSIYGHGLLNLERAVKGPIEFGHPSLIPGNESI"
     gene            complement(1583..2611)
                     /locus_tag="VIC30_02395"
     CDS             complement(1583..2611)
                     /locus_tag="VIC30_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HEY7803272.1"
                     /translation="MVGVQELTPALGNAGACRAMGVWRGAPARRAERAHRLAFVGPPC
                     SPKPARPASPLALSEAERTLVLETLCGERFADMAPAAVHATLLDEGTYLASVRTMYRV
                     LTANASSIERRNQRKHPVYAKPELLALGPNQVWSWDITKLKGPFKWTCFHLYVILDIF
                     SRHVVGWMIAPRESAELAQQLIAETVARHDVLPGMLTLHADRGTSMRSKPVASLLVDL
                     DVAKSHSRPYTSDDNPFSESQFKTMKYRPDFPERFGSLEDARAHCQAFFDWYNNQHRH
                     SGIGYMTPHSVHYGQAQALLATRQATLDAAFSATPNRFKGIRPCQQPLPTAVWINPPI
                     ERKEQAWQ"
     gene            complement(2611..3114)
                     /locus_tag="VIC30_02400"
     CDS             complement(2611..3114)
                     /locus_tag="VIC30_02400"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7803273.1"
                     /translation="MNSKPKVQMHPATDSANSGASQGARRATEDAPELARQVSPSTDS
                     EVVPVAKYRRLTNAQKRSIVIAANACTKPGEIGALMRRHGVYSSSLSTWRRQYEAGEL
                     DGATAKKRGPKANEARAELKQLAQVTRERDKLRQQLTNAKLVIEVQKKVAGLLEQIEV
                     SSKSEKL"
     gene            3913..>4395
                     /locus_tag="VIC30_02405"
     CDS             3913..>4395
                     /locus_tag="VIC30_02405"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY7803274.1"
                     /translation="MSTPLTAQITTNQNRPLQTKTGVWIDVREIHFSVLVRFGVLLGL
                     LAPLVLYQPAFAQWIPGIEYDNQPALSIIRVHNPDPLNPSAYDQGFSGQGIRIGVIDS
                     GINPDHVEFTNKILAGMNAGSSPVWSGESNFSGNLYDSDDAYGEGHGTHVASIAAARL
                     D"
BASE COUNT         1015 a         1155 c         1175 g         1050 t
ORIGIN      
        1 agatcgactc attgccaggg atcaacgaag gatggccaaa ctcgatcggg cctttaacgg
       61 cacgctccag atttagcagc ccgtgaccgt agattgatgt gtcacccaag tcagtcgcag
      121 ttgtaagaat cacttcaatg atctggcgtg ccgtcatgta tgggaaggct tggcgcaaca
      181 cggcagcggc accagccacg tgtggtgccg ccatcgaagt gccactccac acatcgccgc
      241 cagcataagt actcatgggt acagtggcgt agatatcaac accaggtgct gccatacacc
      301 aatcggctgc ctcgccacaa cggttactaa agtcggctat ctcaagagcc tgatcaaccg
      361 cgacgacagc aatcaacgcc ccagcgtaag ggctaccgtc gatagaattg acagcagaga
      421 ctggctcgta cagccacgtt tgcggattat tttcatcagg ctctgggtca ccgtcagcca
      481 gaaaacagta cagcgcatct gaatctaggt cacaaccagg ctgcagtgca tcggtcctct
      541 ctggattaat caaaggaatc atgccagcgc ccaatgggaa ctgagtggaa ataggctgat
      601 tctgatggtc attacctgca gcaaacacca tcaccacatc agcttcactc aggcgtttga
      661 tggcactcaa gtcctccgtc acaaaatcaa cggttagcgc ttggaatccg atttcgacgt
      721 agtccgggtt gggagttcca tcctcgaaat agggcactgg cacagcatcg ggcccaaaac
      781 tgccattcat cactgacact ccggcagcga tcaattgacc agcccagtca cctggcggtg
      841 gatagccttg ctcgtcatca actgcaatca cgccagccaa actcgcgtca aatgccacgc
      901 ccatcatgcc ttgattgttg cgagcagcgg ccgctgtccc catcacatgc gttccatgtt
      961 caggcacctc aagcccgggc aaaggaaagg gcggaaatcc gttggggtag taaattcggc
     1021 cggcaaactc gggatgggtg aactgaaacg cgccatctgc aataccgagc ttgatccctg
     1081 cgcccgtgaa tccgagcgaa tacgcatact ccgcgccgat tgcgcccagc ccccaattgg
     1141 cattgaactc gggcgtacga aaagactctg gtggcgccac tacggtctgc gctgaagcgg
     1201 ctgagttaaa cgtcagacct aaaacgctaa ttgcggctag tttaagggtc gccccgtaag
     1261 cggcaccacc caagtgtgtg atttgatggc aaagcctaac ggcaatttgt tggcttgtcg
     1321 atgaccagga tgagctttgc atgggagcgg cctaagacta atcacattgg catagtacct
     1381 tcgataaatg aaaaatgcga tagcgttcgc cgataatcgc ccagttagtg cggattcacg
     1441 ccgaacttac ggcccattgc aactcaggaa tatcgaagac gagatttcag tgcagatcgc
     1501 tgaggccgcc atgatgtggg catcgtcgga acgtgtcaat gactttgcta cacctggctt
     1561 tataaactca gtgtgtattt gattattgcc aggcttgttc ctttctctcg atgggtgggt
     1621 tgatccatac cgcagtcggc aggggttgct ggcaaggtcg gatacctttg aatcggtttg
     1681 gtgttgcact aaaagcggcg tccagagtcg cttgcctagt ggcaagcagt gcttgcgcct
     1741 ggccgtagtg gacactgtga ggcgtcatgt aaccgatacc tgaatgacgg tgttgattgt
     1801 tgtaccaatc aaagaaggct tggcaatggg ctctagcatc ttcaaggctg ccaaagcgtt
     1861 ccggaaagtc aggccggtat ttcatggtct tgaattgcga ctccgagaaa gggttgtcgt
     1921 cagaggtgta aggacgactg tggcttttgg ccacgtcaag atcgaccaac aaacttgcga
     1981 ctggtttgga tcgcatggat gtgccgcggt cagcgtgcaa ggtgagcatg cccggcaaca
     2041 catcatgcct agccacagtt tcagcaatga gttgctgcgc tagttcagcg ctctcgcgag
     2101 gcgcaatcat ccagcctacg acatgccgac taaagatatc caggatgacg tagaggtgaa
     2161 agcaagtcca tttgaatgga cctttgagct tggtgatgtc ccaagaccag acctggttag
     2221 ggccaagtgc cagtagttca ggtttggcat agaccgggtg tttacgttga ttgcgacgct
     2281 cgatgctgct ggcgttggct gtaagtacac ggtacatggt gcgtaccgaa gcaaggtacg
     2341 taccctcatc gagcaaggtg gcatgcacgg ctgccggtgc catatcagca aagcgctcac
     2401 cgcatagggt ttccaatacc agcgttctct cggcttcact taatgccagt ggggatgctg
     2461 gacgcgctgg ttttggtgaa cacggcggcc caacgaaggc cagacgatgc gcgcgttcag
     2521 cgcggcgagc gggagcgccg cgccaaaccc ccatggcacg acaagcacca gcattgccta
     2581 gcgccggggt gagttcctga acgccaacca ttaaagcttc tcggacttcg aggacacttc
     2641 gatttgctcc agcaatcccg caactttttt ttggacctcg atcaccaact tggcgttggt
     2701 gagctgctgg cgcagtttgt ctcgttcacg ggtcacttgc gccaactgct taagttctgc
     2761 gcgagcctcg ttggctttgg ggccacgttt tttcgcagtg gctccatcta gctctcccgc
     2821 ctcatattgg cgtcgccacg tggacaagga cgatgaatac acgccatgtc gacgcatcaa
     2881 cgcgccgatt tcgccaggct tagtgcacgc attggctgca ataacgatgc tgcgtttttg
     2941 cgcgttggta aggcgtcggt atttggccac gggtaccacc tcagagtcgg tgctcggtga
     3001 tacttgccgc gccaattcag gcgcatcttc agtcgcccta cgggctcctt gcgatgcgcc
     3061 tgaattggca gaatcagtgg ctggatgcat ttgcaccttg ggtttactat tcatttttat
     3121 acctacctag ttgctcacta aactaacacg ggtaggtgca gcaattcatt ctggcacagg
     3181 gggcgtgcag atcgtgcgca aggtgcacaa cgtgtgcgcg agcaggtagg ccttcacgga
     3241 tggatcacat ctctaggcac cgccttgccg catcactcag gtggtgccag tagaaccagg
     3301 atttttattg gactacgcgg gaagtaacct tgccaccgca ggaagtgtag caactccggt
     3361 atccactatc gcactggctg gtgtattgga acgagcacat cgatggccta atgcagttct
     3421 tagcgcccga attcacacag gcctgatact tcgaattcat caagttgtaa ttcgaccggc
     3481 actgagcttc tgagttttgt atctgttgta cacaaaaatt cttttggtta tcacattgcg
     3541 caatacaaac gcgaccttca gcactctctg gcgctgtgta gtcgtagaca atcattggcc
     3601 cgcatgcgct taacaacagg ggggacagcc aaaacaggaa ttttgatagt ttcgacatga
     3661 tttactgttt ttatgttatt tgtttcgaaa gttgatcgta gattctcgac ttgctttgtc
     3721 aatgcgctta tctgcattta tttacactta tctacatttc atctcgcagt ggggcgtaca
     3781 ttcgtctggt gatggctgat tttacctttg cggtgatgcg actgcatttg ttggattgca
     3841 aaggactttg tagcttaatt cgaacatggc aaacctatga gcctacaaag atagccttaa
     3901 gtggcccaca tcatgagcac accattgact gcgcaaatca ctaccaacca gaaccggccc
     3961 ttgcagacga aaacgggtgt atggatagac gtaagggaaa ttcatttttc agttttggtt
     4021 cgttttgggg tgcttttagg gttgttagcc ccattggtgc tttaccagcc tgcgtttgca
     4081 cagtggatcc caggtatcga gtatgacaac caaccggcac tttcaattat ccgggtgcat
     4141 aacccggatc ctctaaaccc gtctgcctat gaccagggct tctcgggcca gggcatccgg
     4201 attggcgtca tcgactcggg tatcaatccg gatcatgtgg agttcaccaa caaaatccta
     4261 gccggcatga acgccggatc tagtccggta tggtctggag agtcgaattt cagtggcaac
     4321 ctttacgaca gtgacgatgc gtatggcgag gggcatggga cccacgtggc cagcattgca
     4381 gcggcacgcc tcgat
//
LOCUS       DATBNL010000143         6426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_170832, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000143 DATBNL010000000
VERSION     DATBNL010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6426
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170832"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..889
                     /locus_tag="VIC30_02410"
     CDS             <1..889
                     /locus_tag="VIC30_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006222731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY7803275.1"
                     /translation="VIVTNGASGALLLASLALINPGQNVLMPDPSYPANANFIMAAGG
                     TTRLMRTEAAQNFQPTAGDINAYWNEQTAGVLIASPGNPTGTSIEPEQLKDIIAAVHR
                     HSGFVMMDEIYLGLSYRDRRQSALALDDNLIILNSFSKYFHMTGWRLGWMIVPPELVA
                     PIEKLAASLMICPPTLAQHGALACFESQTLDLFEHRREAFRTRRDYLVQALASIGFEV
                     PAVPDGAFYVYADISRFSNDSAAFVDTVLNEAGVALVPGIDFGPGHASTKVRLAYTVG
                     LDRLEQAVQRMDQLLKAGS"
     gene            complement(960..1835)
                     /locus_tag="VIC30_02415"
     CDS             complement(960..1835)
                     /locus_tag="VIC30_02415"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY7803276.1"
                     /translation="MTEATTDALSPNKRSWLVQAQYHVALFVKTAGAYLGVAAFVVVF
                     LVLTVPALRNQVSVLHEAMLLALAPEGTRDAISRLGFVPSRNAVAPEVQPVDLDKVPE
                     REIDRLPEPPTEIERSDRVGLLGDIPLAQIDAAREKFGVTEKQMKALEHYIARKYRVA
                     KAVTDRIVESAMVVGAELDINPVLILAVMSVESRFNPYAESGAGAQGLMQIMTRVHTD
                     KFEKFGEGPEDAFHPEVNIRIGAQILYDCIRRRGSVTNGLKCYVGATTPDDGGYSKKV
                     LSEMRRMALAAKIKV"
     gene            1891..3435
                     /locus_tag="VIC30_02420"
     CDS             1891..3435
                     /locus_tag="VIC30_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY7803277.1"
                     /translation="MRYRDLRDFLDQLEKAGKLKRIGTKVDTRLEMTEIADRVLHQGG
                     PALLFENPMHAGQPASMPVLANLFGTPERVALGMGADDVASLRDIGQLLASLREPEAP
                     KGLRDALGKVAMLKSALWDMSPKNVRSAPCQEVVWEGDDVDLDKLPIQTCWPGDVAPL
                     LTWGLVITRGPNAKRQNLGIYRQQVIGRNKLIMRWLSHRGGALDFRDHAIANPGQPFP
                     IAVALGADPATTLGAVTPVPDSLSEYQFAGLLRGARTEVTAALGSTLTVPATAEIVLE
                     GHLLPKTDPRAVQAQTGPGIPEQPPSEYELALEGPYGDHTGYYNEQDWFPVFTVDRIT
                     MRRQPLYHTTYTGKPPDEPAVLGVALNEVFVPLLQRQLPEIKDFYLPPEGCSYRLAVI
                     SIRKQYPGHAKRVMFGIWSILRQFMYTKFLIVVDDDIDTRDWKEVVWAMTTRMDPVRD
                     TITAENTPIDYLDFASPVSGLGGKLGMDATNKWPGETDREWGRPIKMDQDTKKRVDDL
                     WGSLGL"
     gene            complement(3438..4406)
                     /locus_tag="VIC30_02425"
     CDS             complement(3438..4406)
                     /locus_tag="VIC30_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY7803278.1"
                     /translation="MIPRTSAWLLSLLAVLVVTSMLTGPARVGLAELGDWFVGQANEQ
                     TNLVLGELRWPRTLMSLLTGATLAAGGAVMQSLFRNPLAEPGLVGVSAGAALGAVLAM
                     ALGATGFFVIGAAGFVGAVTATAIAWQFARGWPSSAGLLLAGVAINALVASLISLLIA
                     FAPDAQLRSMTFWTLGSMSRTPWPVVVALAIWLPLGFWWLYRRWPALNALLLGESQAA
                     HVGVNVSALRASLIVAMALLIGPLVAFTGAISFVGLLVPQLVRRLYGSDHRQLLPIAA
                     VMGAAAVLAADILSRVLIAPAELPVGVVISLIGAPAFLWVLRRTVT"
     gene            complement(4431..5072)
                     /gene="upp"
                     /locus_tag="VIC30_02430"
     CDS             complement(4431..5072)
                     /gene="upp"
                     /locus_tag="VIC30_02430"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003819789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEY7803279.1"
                     /translation="MALHEIKHPLVKHKLGLMRGAALSTKSFRELAQEVTTLLMYEAS
                     KNFAMEPHQEQGWAGEVSVERVAGKKVTVVPILRAGIGMLDGVLNLIPGARVSTVGLA
                     RNEDTLQAHTYYERLVGQLEQRIAIIVDPMLATGGSMVAAIELLKNAGAKDIRALVLV
                     AAPEGIKRVTELHPDVEIYTAAVDQGLNEQGYIVPGLGDAGDRVFGTKQKHPD"
     gene            complement(5142..>6426)
                     /gene="dacB"
                     /locus_tag="VIC30_02435"
     CDS             complement(5142..>6426)
                     /gene="dacB"
                     /locus_tag="VIC30_02435"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEY7803280.1"
                     /translation="VIEEVGGSRLAGVNAAEFKNPASVMKLLTTWAAVSELGPDFVWR
                     TALLIDENAKISDAGVLSGPVYLRATGDPLILLEDLWRLLRELRFRGITQINDIVVDR
                     SAFAEVAINPGDFDGKPDRPYNASPDAFMIGFGALRLVFTPDLQAKRWRAFVDPPIDG
                     VDIDSNIKYLDGSCRRGPNVGIRMVENGNDVRFRVDGQAYGACGEFDFYRLAFDQQSF
                     AARALRSMWTELGGTMTGDVKAGTTPNNAMPVAAHQSPPLAEVIRLVNKRSNNVMTRV
                     LMLTLGAQFGPRPATVASSAEVVKQIISRQGIELGQTVVDNGSGLSRDARISADVMSD
                     ILQHAWRSPTMPEFVSSMAILGIDGTLRRRLSNNDARGYANMKTGALKNARAIAGYVL
                     AKSGKRYVFVSLVNHPQAYKARNFENSVMDWLNER"
BASE COUNT         1519 a         1912 c         1641 g         1354 t
ORIGIN      
        1 cgtgattgtg accaacggcg caagtggcgc actgttattg gcgagtctgg cactgattaa
       61 cccgggacaa aatgtactca tgccagaccc atcctacccg gccaatgcga atttcatcat
      121 ggcagccggt ggcaccacgc ggctgatgcg aaccgaagcc gcacaaaact tccaacccac
      181 cgccggcgat attaacgcgt actggaatga acagaccgct ggcgtactga ttgcctcgcc
      241 tggcaatccg acgggcacct ccattgaacc tgaacagctc aaagacatca tcgctgcggt
      301 gcatcggcat tcgggatttg tgatgatgga cgagatttat ctgggtttgt cttaccgtga
      361 caggcgccaa tcagcactgg cgctcgatga caatctgatc attctgaata gcttctctaa
      421 gtactttcac atgacgggct ggcggcttgg ctggatgatt gtgccgcctg agttggtggc
      481 acccatcgaa aaactcgccg ctagcctcat gatttgccca cccacgctcg cgcaacacgg
      541 cgccttagct tgtttcgagt cacagacact agatttattt gaacatcgtc gcgaggcatt
      601 tcgcacccgc cgcgactatt tggtccaagc gttagcgtcc atcggctttg aggtgcctgc
      661 tgtaccagat ggcgcttttt acgtctatgc cgatatcagc cgtttttcaa atgacagcgc
      721 cgcgtttgtc gacactgtcc taaatgaggc cggcgtggca ttggtgcctg gtatcgattt
      781 tgggccaggc catgccagca ccaaggtgcg cttggcttac acagttgggc ttgatcgcct
      841 ggagcaggct gttcaacgca tggaccaatt gcttaaagcg ggttcttaaa gcgggttctt
      901 aatgcaggca cttaatacaa gcacttgata caaaacctga tgtctagact tttaaacctt
      961 tagactttta ttttggccgc tagcgccatg cggcgcatct cagaaagcac ttttttgctg
     1021 tagccaccat cgtcaggtgt cgtggcaccg acatagcact tcaaaccatt ggtcactgaa
     1081 ccgcgtcggc gtatgcagtc atacaaaatc tgcgcgccga tgcgaatgtt gacctctgga
     1141 tgaaacgcgt cttctgggcc ttcaccgaac ttctcgaatt tatccgtgtg cacgcgtgtc
     1201 atgatctgca tcaggccttg tgcgcccgca ccactctcag catagggatt aaagcgtgac
     1261 tcgaccgaca tcaccgccag aatcaaaacg gggttgatat caagttcggc acccaccacc
     1321 attgctgact caacgatgcg atccgtcacc gccttggcca cacgatattt gcgcgcgatg
     1381 tagtgctcga gcgccttcat ttgtttttcc gttacgccga acttctctcg cgcagcatcg
     1441 atttgcgcca gcggaatatc accaagcagg ccgactcgat ccgaacgctc tatttcggta
     1501 gggggttcag gcaagcgatc gatttcgcgc tcaggcactt tgtctagatc aacgggctgc
     1561 acttcaggtg caaccgcatt ccgacttggc acgaaaccga gtcgggaaat ggcatctcgg
     1621 gtgccttcag gcgcaagcgc caagagcatt gcctcgtgca acaccgacac ttggttgcgc
     1681 aacgcaggca cagtcagcac tagaaacacc accacaaagg cagccacacc taagtaggca
     1741 cctgcggttt taacgaatag tgccacgtga tactgggctt gtaccagcca agatcgcttg
     1801 ttgggcgata atgcgtcggt cgttgcttcg gtcatgagcc gcagtttaac ggctaatgaa
     1861 acgaccacca aacctagacg gaaacaaaac gtgcgatatc gtgacctgag agattttctg
     1921 gatcagctag aaaaagctgg caagctcaaa cgcattggca ccaaagtcga cacccgactg
     1981 gaaatgaccg agattgccga ccgtgtgctg caccagggcg ggccagccct cctctttgaa
     2041 aatcccatgc acgccggtca acccgcgagc atgcccgtac tagcgaacct atttggtaca
     2101 cccgagcgtg ttgcattggg catgggcgct gatgatgtcg cctcgttgcg cgatatcggt
     2161 caactgctgg catcgctgcg cgaaccagag gccccaaaag gcctgcgcga tgcgcttggc
     2221 aaggtggcca tgcttaagtc agcgctttgg gacatgagcc ccaagaatgt gcgcagtgcg
     2281 ccgtgccagg aagtggtttg ggaaggtgac gatgtcgatt tggacaaact gccgattcag
     2341 acctgctggc ctggcgatgt tgcgccgctc ttaacctggg gactggtcat cacccgtggg
     2401 cccaatgcca aacgccagaa tctgggtatc tatcgccagc aggtgattgg gcgcaataag
     2461 ttgattatgc gctggctatc gcacaggggc ggagcactcg atttccgtga ccacgccatc
     2521 gccaaccccg gccagccgtt tccgattgcc gtggcactcg gtgccgaccc cgccaccacc
     2581 ttgggtgctg tcacacccgt gcctgatagt ttgtctgagt accagtttgc tgggttgctg
     2641 cgcggtgcgc gcaccgaagt aaccgccgca cttggcagca cactgaccgt gcctgccact
     2701 gctgaaatcg tgctcgaagg tcacttacta ccaaaaactg acccacgcgc tgtacaagcg
     2761 caaaccggtc ccggcatacc cgaacaaccc ccttctgaat atgagctcgc gcttgaaggt
     2821 ccgtatggcg accataccgg ctactacaac gaacaagact ggttccctgt gtttacggtc
     2881 gaccgcatca cgatgcgtcg ccagccgctc taccacacca cctacactgg caaaccgcca
     2941 gacgagccag ctgtacttgg ggtggcgcta aatgaggtct ttgtgccatt gctgcaacgc
     3001 cagttacctg agatcaaaga cttttatttg ccgcccgagg gctgcagcta tcgcttggcc
     3061 gtgatttcca tacgcaaaca atatcccggt cacgccaaac gtgtgatgtt cggcatctgg
     3121 agtattttgc gccaattcat gtacaccaag ttcctgatcg tggttgacga tgacatcgac
     3181 acgcgcgact ggaaagaagt ggtctgggcc atgaccaccc gcatggatcc agtacgtgac
     3241 acgatcaccg cagaaaacac acccattgat tacctagact ttgcgtcacc ggtctcaggt
     3301 ctcggtggca agcttggcat ggacgccacc aacaagtggc ctggtgagac tgatcgggaa
     3361 tggggtcgtc cgataaaaat ggatcaagat actaaaaagc gggtggatga tttgtggggt
     3421 tcactgggtc tttaacatca cgtgactgtt cggcgcaaca cccacaaaaa ggcgggtgca
     3481 ccgattaagc taatgaccac accgaccggt aactccgctg gtgcaatcaa tacgcgcgac
     3541 aaaatgtcgg ccgccaatac ggcggccgcc cccatcactg cagcaatcgg cagcagttga
     3601 cggtgatcac tgccataaag acggcgcacg agttgtggca ctaatagccc cacaaagctg
     3661 atcgcaccgg taaatgccac caaaggtcca atcaatagag ccatggctac gatcaggctg
     3721 gcgcgtagcg ccgatacatt gacaccaacg tgcgctgctt gtgactcacc cagcaatagc
     3781 gcattgagag ccggccagcg tcgatacaac caccaaaacc ccaacggcaa ccagattgcg
     3841 agcgcaacga caacaggcca cggcgtgcga ctcatactgc caagtgtcca gaacgtcatc
     3901 gaacgcagtt gtgcatcggg cgcaaacgca atcaagagac taatcaagct tgccaccaga
     3961 gcgttaatgg ccacaccggc taacaacaaa cccgcggaac ttggccaacc acgcgcgaac
     4021 tgccaagcaa tggccgtggc ggttaccgcg cccacgaaac cagctgctcc aatcacaaaa
     4081 aaaccagttg cgcccaatgc catggcaagc acggccccga gtgccgcccc agcagacacg
     4141 cccaccaaac caggctcagc caatggattg cgaaataaac tttgcatcac cgcgccaccg
     4201 gcggctaagg tcgctcccgt gagcagcgac atcaaggttc ggggccaacg caactcacca
     4261 agtactaagt tcgtttgctc atttgcctgt ccgacaaacc aatcacctag ctcggccagc
     4321 ccaaccctag ctgggccggt cagcatacta gtgaccacca aaacggccag caaagacagc
     4381 aaccaagcgc tggttcgagg gatcattgtc tgtgagtgaa ccacagcacc ctagtcaggg
     4441 tgcttttgtt tggtaccaaa cacccgatca ccggcgtcac ccagacccgg cacgatgtag
     4501 ccctgttcat tcaaaccttg gtcgactgct gcggtgtaga tttccacatc aggatggagc
     4561 tcggttaccc gcttgatacc ctctggcgca gcgactaaca ccagcgcccg gatatccttg
     4621 gcaccggcat ttttaagtaa ctcgatcgcg gcaaccattg agccacctgt tgccaacatc
     4681 ggatccacga taatcgcgat gcgttgctca agttgaccga ccagacgctc atagtaggta
     4741 tgggcttgca acgtatcttc attgcgcgcc aaaccgaccg tactgacgcg tgcacccgga
     4801 atcaaattca gcaccccatc aagcataccg atgccagcac gcaagatcgg tacaaccgtc
     4861 actttcttgc cggccacccg ctcaacgctg acttcgccag cccaaccctg ctcctgatga
     4921 ggctccatgg caaagttttt actggcttca tacatcaata gcgtggtgac ttcttgcgcc
     4981 aactcacgga aactcttggt actcagcgca gcaccgcgca tcaacccgag cttgtgcttg
     5041 accaaagggt gcttgatttc atgcaatgcc acgcgacgtt ctcctgctag ctacagttgt
     5101 ggttataccg gtgtcaccgg gggttctcgt tctagtcagc atcaacgctc atttagccaa
     5161 tccattaccg agttctcaaa attgcgcgct ttgtaggctt gtggatgatt gactaggctc
     5221 acgaacacgt aacgcttgcc agacttggct aagacatagc cggcaatggc tcgggcgttt
     5281 ttaagtgcac ctgttttcat gttggcgtag cctcgagcat cattgttgct tagacgacgt
     5341 ctgagggtgc catcaatgcc cagaatcgcc atcgatgaaa caaactcagg catcgtgggc
     5401 gagcgccagg cgtgttgcaa gatgtctgac atgacgtcag cgctgatcct agcgtcgcgt
     5461 gacaacccag acccattgtc taccacggtc tgaccaagct caatgccctg acgggaaatg
     5521 atttgtttca ccacctctgc gctgctggcc accgtggctg gtcgcggacc aaactgtgcg
     5581 ccaagcgtga gcatcaacac ccgcgtcata acgttgttgc tgcgcttatt gaccaaacgt
     5641 atgacttcag ccagaggcgg tgactgatgt gcagcgactg gcatggcatt gttcggggtc
     5701 gtaccggctt tgacgtcacc tgtcatcgtg ccgcccaact ccgtccacat gctacgaagt
     5761 gcccgtgcag cgaaggattg ctgatcgaag gccaggcggt agaaatcaaa ttcaccacaa
     5821 gcaccgtagg cttggccatc gacacgaaac cgcacatcat tgccgttttc gaccatgcga
     5881 atgcccacat tcggaccacg tcggcaactg ccgtcgaggt acttgatgtt gctgtcaata
     5941 tccacgccat caatgggtgg atctacaaac gcacgccaac gcttggcctg caagtccggg
     6001 gtaaacacca gacgcagagc accaaaaccg atcataaatg catcaggact cgcgttatag
     6061 ggtcgatcgg gtttgccatc gaaatcaccg gggttaatcg ccacctcagc aaacgccgat
     6121 cggtccacca caatatcgtt aatttgcgta atgcctctaa agcgcagttc acgcagcaag
     6181 cgccaaagat cctctaacaa gatcaagggg tcacctgtgg cgcgcaagta aacggggccc
     6241 gacaaaacac ccgcgtcact gatcttggca ttctcgtcga ttaacaatgc cgtgcgccac
     6301 acaaagtctg ggccgagttc actgactgcc gcccacgtgg tcagcagctt catcaccgac
     6361 gcgggatttt taaactcggc ggcgttcacc ccagccaagc gactaccgcc gacttcttca
     6421 atgacc
//
LOCUS       DATBNL010000144         4928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_151088, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000144 DATBNL010000000
VERSION     DATBNL010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151088"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VIC30_02440"
     CDS             <1..422
                     /locus_tag="VIC30_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803281.1"
                     /translation="RRYQDTQPNGIKEVEQQLALFTEDTVFISFPIAQVVGSSEPRLL
                     MGKAALREAFLSYNAFAAQAQSLAITYHHAYAYEDPETNKGVCGFTLLIQMREDEKLS
                     VAMNQLQLYVNQDNLIDRSVNWQAQATPEIVNQALFA"
     gene            complement(431..1522)
                     /gene="ychF"
                     /locus_tag="VIC30_02445"
     CDS             complement(431..1522)
                     /gene="ychF"
                     /locus_tag="VIC30_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEY7803282.1"
                     /translation="MALQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIV
                     EVPDPRLDQLAGLVKPERVVPATVEFVDIAGLVAGASQGEGLGNQFLSHVRETDAIIN
                     VVRCFEDDNVVHVAGRVDPIADIEVIETELCLADMQTAEKALHRHQKTARSGDKEAQK
                     VVAILEQVIAHLNNTQPIRTLDLSKDDRVLIAPLCFITAKPAMYVGNVSDDGFENNAL
                     LERLQAYAQERHAPVVAICASIEAEIADLSEEDKTVFLADMGMQEPGLNRLIRAAFKL
                     LGLQTYFTAGVKEVRAWTVPIGATAPQAAGVIHTDFERGFIRAQTVAFDDYVACGSEQ
                     AAKEGGKLRAEGKEYVVQDGDVLNFLFNV"
     gene            complement(1590..2387)
                     /locus_tag="VIC30_02450"
     CDS             complement(1590..2387)
                     /locus_tag="VIC30_02450"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HEY7803283.1"
                     /translation="MSPRPDPDEPRLPQPQRPMTWLDEWHDLWAFVRRPRLAPRCRQI
                     KPGSAWLLDWRLQISPLRLLGWAAVLWGINLFLFGPIVMSVAKQAGATHAVDPTNLPW
                     LLALVWAPLVEEMLFRYGLRRPLIALWLVPLMILALLLGPGIGQTIVFALTAFAIYRA
                     TCANPMPSVRSRIWLRAYRRWFWLVFHLSVLLFAMLHLFNFSFAAAQWWMLPLLILPQ
                     WFTGLVLGWIRVMRGIGAAIVLHALFNFGPLFSAWLAMRWLQSAGLV"
     gene            complement(2365..2976)
                     /gene="pth"
                     /locus_tag="VIC30_02455"
     CDS             complement(2365..2976)
                     /gene="pth"
                     /locus_tag="VIC30_02455"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEY7803284.1"
                     /translation="MAHEPITLVVGLGNPGNQYVRTRHNAGFWLVERWASKLNATFST
                     EKSFFGEVAKARWQGRQVWLLKPNTFMNRSGQSVGALARFYKVPLESILVAHDELDLL
                     PGQVRIKQGGGHAGHNGLRDIQTVMGGPGFWRVRLGIGHPRSLGLMQGVADFVLHPPS
                     ETDQQKIDRCLDRCDQAMGLLLEASMSKAMGELHRDDEPAPRP"
     gene            complement(3061..3690)
                     /locus_tag="VIC30_02460"
     CDS             complement(3061..3690)
                     /locus_tag="VIC30_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEY7803285.1"
                     /translation="MEFIATSRSVQGSSASRRLRRAGRVPAIVYGGQEPPLNIEVDHN
                     DIYHALRKEQFHASVLDMKLENKTHSVLLRAVQWHPYKQQVLHIDFQRVDASKLLHTK
                     VPLHFINAETSPAVKLSAAVISQVITELEVECLPANLPQYIEVNLGNIVAGQSVHVKD
                     ITLPRGVKYVPHGGDENPIVASAAVPAAKRGDDGEDGDAAAGDEQTTQE"
     gene            complement(3830..4780)
                     /locus_tag="VIC30_02465"
     CDS             complement(3830..4780)
                     /locus_tag="VIC30_02465"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEY7803286.1"
                     /translation="MTPESFMIFTGTANTRLAVDVVNHLDMSLGKMTVGRFSDGEVMV
                     EVNENVRGKDVFVLQPTCAPTNDNLMEVMVMVDALRRASARRITAAIPYFGYARQDRR
                     PRSARVAISAKIVANMLQVVGVDRVLTMDLHADQIQGFFDIPVDNIYAGPILLGDIWR
                     RNLSNLVVVSPDIGGVVRARALAKQLEADLAIIDKRRPRANVSEVMNIIGDVDGRTCV
                     IMDDMVDTAGTLCKAAQALKERGAGAVYAYCTHAVLSGGAIDRISTSELDELVVTDSI
                     PLSEAAAACGKIRQLSCAGLIGETLLRISHAESVSSLFVD"
BASE COUNT         1266 a         1427 c         1221 g         1014 t
ORIGIN      
        1 caaggcgcta ccaagacacg cagcctaatg ggatcaaaga ggtagagcag cagctagcgt
       61 tgtttacaga agacacagtg tttatcagtt tcccaattgc acaggtcgtt ggtagcagcg
      121 agccgcgcct attgatgggt aaagctgcgt tgcgcgaggc attcctgtca tacaacgcct
      181 tcgcagcgca ggcgcagtca ctagccataa cctaccatca tgcgtatgcg tatgaggatc
      241 ccgagacaaa caagggcgtc tgcggtttca cgctgttaat tcagatgcgc gaagacgaga
      301 aactcagcgt ggcaatgaat cagttgcagc tttatgtgaa tcaagacaac ttgattgacc
      361 gttctgttaa ttggcaagca caggccacac cggaaattgt caatcaggca ctgtttgcct
      421 gactgacacc tcagacgtta aacaagaagt tcaagacatc gccatcttgc accacgtact
      481 ctttgccttc agcacgcaac ttgccacctt ctttagcggc ttgctcactg ccgcaagcca
      541 catagtcatc aaaggccacg gtctgtgcgc gaataaagcc ccgctcaaaa tccgtgtgaa
      601 taacgcctgc agcctggggt gcggtcgcac cgatcggcac ggtccaggca cgtacttctt
      661 taacgccagc ggtgaagtag gtttgcagac cgagcaactt aaatgcggca cgaatcagac
      721 gattcaggcc aggttcttgc atacccatgt cagccagaaa gactgtttta tcctcttccg
      781 acaaatctgc gatctcagcc tcgatggatg cgcaaatggc caccaccggt gcatgacgct
      841 cttgggcgta agcttgcagt cgctccaaca gcgcattgtt ctcaaatccg tcgtcactga
      901 cattacccac gtacatcgct ggcttggcgg tgataaagca caagggcgcg atcagcacac
      961 gatcgtcttt ggatagatcg agtgtgcgaa tcggttgggt gttgttcagg tgcgcgatga
     1021 cttgctcaag gatggccacc accttttgtg cttctttgtc gcctgaacgc gcggtttttt
     1081 gatgacgatg caatgctttt tcagcggtct gcatatcagc caaacacagt tcggtctcaa
     1141 tgacttcaat atctgcgatt ggatcgacgc ggccagccac atgcaccacg ttgtcatcct
     1201 caaaacagcg cacaacattg atgatggcgt cagtttcacg aacatgtgac agaaactggt
     1261 taccgagtcc ctcgccttga ctggctccag ccaccaaacc ggcaatatcg acaaactcta
     1321 ctgttgccgg caccacgcgt tcgggcttaa ccaaaccggc cagctgatcg agtctggggt
     1381 caggtacctc aacgatgccc acattcggtt caatggtgca gaagggatag ttctctgcag
     1441 cgatacctgc tttggttaac gcattaaata gggttgactt gccgacgttg ggcaggccca
     1501 cgatgccaca ctgcagtgcc atagaaattc cagttcagtt caaacaaacc gcaagtgtaa
     1561 ccgggtcgca aggcactcat gtggcgacat cacaccaacc cggcactttg caaccaacgc
     1621 atggccagcc atgctgagaa caaaggccca aaattaaaca acgcatgcaa gacgatggct
     1681 gcaccgatgc cacgcatcac ccgaatccaa ccaagcacca gacccgtaaa ccattgcggc
     1741 aggatcagca atggcaacat ccaccactgt gctgccgcaa aactgaaatt aaacaggtgc
     1801 agcatggcaa ataacaggac cgacagatga aacaccagcc agaaccaacg gcgataggct
     1861 cgcaaccaaa tacgcgagcg cacgctcggc attgggttcg cgcacgtggc gcgataaatg
     1921 gcaaacgccg tcagtgcgaa aacaatcgtc tgcccaatgc caggccccaa caacagggcc
     1981 agaatcatta agggcaccaa ccacagcgca attaagggtc gtcgcagccc ataccgaaac
     2041 aacatctcct cgactagcgg cgcccaaacc agcgccaaca gccaaggcag gttagtggga
     2101 tcaacggcat gtgtggcacc cgcttgttta gccacactca tgacaatggg cccaaacaga
     2161 aacaggttaa tgccccacaa cacagcggcc caacccaaca agcgcaacgg gcttatctgc
     2221 aggcgccaat ccagtagcca agctgagccg ggtttgattt gccgacaccg gggtgcaagc
     2281 ctgggacgac gcacaaacgc ccaaaggtca tgccattcat caagccatgt catagggcgt
     2341 tgcggctgtg gcaaccgcgg ctcatcaggg tctgggcgcg ggctcatcgt cacgatgcag
     2401 ctcccccatg gctttgctca tcgaagcctc tagcaacaat cccatggctt gatcgcaacg
     2461 gtccagacag cgatcaattt tttgttggtc ggtttctgat ggcggatgaa gcacaaaatc
     2521 ggccacccct tgcatcaggc ccaagctgcg aggatgacca atgccaagac gcacccgcca
     2581 gaaccccggc ccacccatca cagtttgtat gtcgcgcaag ccattgtggc cggcgtgacc
     2641 accaccttgc ttgattcgaa cctgaccggg taataagtcg agctcatcat gagccaccag
     2701 aatcgattcg agcgggactt tatagaaacg cgccagcgcc ccaactgact gcccagaccg
     2761 attcatgaag gtattgggtt ttaacaacca aacctgacgc ccttgccagc gggctttggc
     2821 cacttcaccg aaaaaggatt tctccgtact gaacgtggcg ttcagtttgg atgcccaacg
     2881 ctcaaccaac cagaacccgg cattgtggcg ggttcgtaca tactggttac ccggattacc
     2941 gagtccaacc actaaagtaa tcggttcatg cgccatggtg aatgatcttt aaaaaaaccc
     3001 tgccgacttt aacatcggca gggtttagag agctcaatga ctcagtaaga acaacgccaa
     3061 ttattcttgg gttgtctgtt catcaccagc agctgcatca ccgtcttcac catcatcacc
     3121 gcgcttggca gccggcacgg ccgcggatgc cacgatgggg ttctcatcac caccgtgtgg
     3181 cacgtacttc acgccacgtg gcaatgtgat gtctttaaca tgcacagact gaccagcaac
     3241 gatgttgccg aggttgactt cgatgtactg cggcaagttg gcaggcagac actcaacttc
     3301 gagctcggta atcacctgtg aaatcacagc agcacttaac ttcaccgccg gagacgtctc
     3361 tgcattaata aagtgcagcg gcactttggt gtgaagcagc ttagaagcat caacgcgctg
     3421 gaaatcgatg tgcaacactt gctgcttgta ggggtgccac tgtacagcac gcaacaagac
     3481 agaatgcgtc ttgttctcga gcttcatgtc gagcacggat gcgtgaaact gttctttgcg
     3541 cagggcgtgg tagatgtcgt tgtgatcgac ttcgatgttc agaggcggtt cctggccgcc
     3601 ataaacgatg gctggcacac gtcccgcacg gcgcaggcgg cggctcgcac tcgatccctg
     3661 aacgctacgt gaggttgcaa taaattccat ttcttactcc aaaacagggc ttacgcccct
     3721 tgataaacac gaaccgacca tcggctcatg tatcggtgaa cggtcgcgac caacagtcca
     3781 cccgatctca tcgaccttgc ccaataccgc gacaaggcct taataatctt taatcaacaa
     3841 ataacgaact gaccgactca gcgtgagaaa tgcgcagcaa cgtctcgcca atcaatcccg
     3901 cacaggacag ctgacgaatc ttgccgcagg cagcagcagc ttctgacagc ggtattgagt
     3961 ctgttactac gagctcatca agctcggagg tcgaaatacg gtctatcgcc ccgcctgata
     4021 gcaccgcatg tgtacagtac gcataaaccg cgccggcacc gcgctcttta agcgcttgtg
     4081 ccgctttaca caacgtgccc gcggtatcga ccatgtcatc catgatgacg caggttctac
     4141 cgtccacgtc accaatgatg ttcatgactt cagacacatt ggctcgggga cgacgcttat
     4201 cgatgatcgc caaatcggcc tcaagctgct tggccagtgc tcgcgcacgc accacaccgc
     4261 cgatgtcggg ggaaaccacc accaaattcg acaggttacg gcgccagata tcaccaagca
     4321 ggataggacc ggcatagata ttgtcgaccg gaatatcaaa aaacccttga atctgatcgg
     4381 cgtgtaaatc catggtcaac acacgatcaa cacccaccac ttgcagcatg tttgccacga
     4441 tcttggcgga aatcgccaca cgcgccgaac gcggccgacg gtcctgcctg gcatagccaa
     4501 agtaagggat cgctgccgtg atgcgccttg ccgatgcacg ccttaacgcg tcaaccatca
     4561 ccatgacttc catgaggttg tcattggtgg gtgcacaggt aggctgcaat acaaaaacat
     4621 ccttaccgcg gacgttttca ttgacctcaa ccatgacttc gccatcagag aagcgaccga
     4681 cggtcatttt tccgagcgac atatcaaggt gattaacaac atccacagcc aaccgtgtgt
     4741 tggccgtgcc ggtgaaaatc atgaaacttt caggtgtcat ggtagaaaca tcgctgaaaa
     4801 gaaaaagctg ctgaaccgcg ccgcaaggac ggtggcaagt tcaacagctt tgttgttggc
     4861 tggggaggaa ggactcgaac cctcgcatgc cggaatcaaa atccggtgcc ttaaccaact
     4921 tggccact
//
LOCUS       DATBNL010000145         3954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_81541, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000145 DATBNL010000000
VERSION     DATBNL010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3954
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81541"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1274)
                     /gene="tig"
                     /locus_tag="VIC30_02470"
     CDS             complement(<1..1274)
                     /gene="tig"
                     /locus_tag="VIC30_02470"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEY7803287.1"
                     /translation="MQPEVQTLDGLERRVEVSVAMADIEKQVKEELKKVARTAKAPGF
                     RPGKVPMSMLERSHGPGIRYDVINREVGKAIDTTLAATGLRVAGAPTLEPKTEGVGDD
                     TLAFNATFEVYPEIEVPDLSGVDVAKAVCEVSDAEVDRTVNILREQRAQYVAEEGRAA
                     ADDDQVKIDFVGKIDDVAFEGGTAEDFAFVVGKGRMLTEFEEAVRGMKAGESKTFPLT
                     FPEDYPGKEVAGKTAEFSVTVKEVGRPELPEVNEAFARELGQTEGSVEKLLADIRSNI
                     EREVKSRLMARTKNSVMKALLEKAEFDVPKALVNNEIENRTAAAREELKQRGIPNPES
                     VPIPPETFAEEAQRRVKLGLMIGELVKKAELQAKPEQVRAKIEMFAQNYEQPAEVVSY
                     YLSDRQRRAEIEAVVLEDNVVDHVLASAKVSE"
     gene            complement(1336..1423)
                     /locus_tag="VIC30_02475"
     tRNA            complement(1336..1423)
                     /locus_tag="VIC30_02475"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1387..1389),aa:Leu,seq:tag)
     gene            1487..2683
                     /gene="dapC"
                     /locus_tag="VIC30_02480"
     CDS             1487..2683
                     /gene="dapC"
                     /locus_tag="VIC30_02480"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0019877 - diaminopimelate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEY7803288.1"
                     /translation="MNPRLDHLQPYPFEKLRQLLADANPDKTGLPLVDLSIGEPKHDA
                     PELAKQAIVDSLAGLSGYPPTKGAPMLRRTIADWIGRRYSIAAPDPETQVLPVLGSRE
                     ALFAFAQTVINPENKGLVVCPNPFYQIYEGAALLAGATPHYINATAENNFLCDWASVD
                     IDVWRQTELLYVCNPGNPAGSVMPLSDWELLFELADEHDFVIASDECYSEIYLDEGSP
                     PLGGLQAAVALGRNDFRRLVSFSSLSKRSNLPGLRSGFVAGDANLISRFLLYRTYHGS
                     AMSGVVTAASLAAWQDEAHVKHNRQAYRDKFDAVLEILSPVLNVARPQASFYLWAPTP
                     YDDAQFTRDLLDQQAVKVLPGSYVSRTADGQNPGANRIRIALVAPLEACVEGAHRIAS
                     FARQLD"
     gene            2853..3674
                     /gene="dapD"
                     /locus_tag="VIC30_02485"
     CDS             2853..3674
                     /gene="dapD"
                     /locus_tag="VIC30_02485"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEY7803289.1"
                     /translation="MTLDLQTTIEAGWQGRDGLSPEDAEPALREAIEHAIDGLDQGTL
                     RVAEKIDSQWVVHQWLKKAVLLSFRLNNNEVIAHGPLEFYDKVPLKFTGYGEHAFKAG
                     GFRVVPPAVARRGSHIGRNVVLMPSYVNIGAFVDDGTMVDTWATVGSCAQIGKNVHLS
                     GGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVVVEENSVLAMGVFLSQSTRIYDR
                     ETKQISYGRVPAGSVVIPGSLPSKDGSHSLACAVIVKKVDAQTRAKTSINDLLRA"
     gene            3689..>3954
                     /locus_tag="VIC30_02490"
     CDS             3689..>3954
                     /locus_tag="VIC30_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013665.1"
                     /note="dapE-encoded N-succinyl-L,L-diaminopimelic acid
                     desuccinylase (DapE), catalyzes the hydrolysis of
                     N-succinyl-L,Ldiaminopimelate L,L-SDAP to
                     L,L-diaminopimelate and succinate. It is a metalloprotease
                     containing dinuclear active sites. Its structure is
                     similar to the carboxypeptidase G2 from Pseudomonas sp.
                     strain RS-16 and the aminopeptidase from Aeromonas
                     proteolytica; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEY7803290.1"
                     /translation="MDTPVLELTKNLIERPSVTPDDQGCQQLIIDRLTPLGFEAHAIE
                     QGGVTNLWIRRGQVAPLVVFAGHTDVVPTGPLDRWYSDPFVPTL"
BASE COUNT          879 a         1159 c          999 g          917 t
ORIGIN      
        1 tcttcgctaa ccttggcgct agcaagcaca tgatcaacca cgttgtcttc aagcaccact
       61 gcctcgattt ccgcacgacg ctggcgatct gacaagtagt agctcacgac ttcagcgggc
      121 tgctcatagt tttgcgcaaa catttcaatc ttggctctaa cctgctctgg tttggcttgc
      181 agctcagctt tcttgacaag ctcgccaatc atcaggccaa gcttgacgcg acgctgtgct
      241 tcctcagcaa aggtctctgg cggaatagga accgactcag gattgggaat gccacgctgc
      301 ttgagctctt cacgagccgc agcggtacga ttttcaattt cgttattcac caaggccttg
      361 ggcacatcaa actcggcctt ctcgagcaag gctttcatca cactgttctt ggtacgcgcc
      421 attaaacgcg acttcacttc acgctcgata ttcgaacgaa tgtcagccag cagtttctca
      481 acgctgccct cggtctgacc gagttcacgc gcaaacgcct cattgacttc tggcagttcc
      541 ggacgaccca cttccttaac tgtcactgag aactcagcgg ttttgccagc gacttctttg
      601 ccaggatagt cttcaggaaa tgtcagcggg aatgttttgc tttcgccggc cttcatgccg
      661 cgaaccgcct cttcgaattc ggtcaacata cgacctttgc caaccacaaa cgcaaaatct
      721 tcggcagtgc caccctcaaa agcgacatca tcgatcttac caacaaagtc gattttgacc
      781 tgatcatcat ccgcggcagc gcgaccttcc tcggccacgt actgagcacg ctgctcgcgc
      841 aagatattga cggtacggtc gacttcagcg tccgacactt cgcaaaccgc tttggcgacg
      901 tcgacaccag acaggtccgg cacttcgatt tctggataca cctcaaaggt ggcattaaac
      961 gccaacgtgt cgtcacccac gccttccgtt ttgggttcga gcgttggcgc acccgccacg
     1021 cgcaggcccg ttgctgcgag cgttgtgtcg atggctttgc cgacttcgcg gttaatcaca
     1081 tcgtaacgga tgccgggacc gtgggaacgc tcaagcatcg acatcggcac tttgcctggg
     1141 cgaaaccctg gcgcttttgc tgtgcgcgcg acttttttga gttcttcctt gacctgtttt
     1201 tcaatatcgg ccatggccac ggagacttct acgcggcgct ctaggccgtc aagggtttga
     1261 acctcaggtt gcataaatcg ttcaccacat tcttgtcagt cgacagactg caaacagtct
     1321 gtcgggttta tcaaatggtg cgaagggcgg gactcgaacc cgcacaccct aagcgggcgt
     1381 caggacctaa acctggtgcg tctaccaatt tcgccacctt cgcggatcag cggattgtag
     1441 cgcaacatca gaccgctatt cagtgacctc gcgctaaaat ccggatatga acccacgcct
     1501 agaccacctg cagccctatc cttttgaaaa actgcgccag ctactggccg atgccaaccc
     1561 cgacaaaacc ggtctgccac tggtcgattt gtccattggt gagcccaagc acgacgcacc
     1621 ggaactggcc aaacaagcca tcgtagactc acttgccggc ttatctggct atccacccac
     1681 caagggtgca ccgatgttgc gccggacaat cgccgactgg attggtcgac gctattcaat
     1741 cgctgcgcca gacccagaga cgcaggtcct ccccgtgctc ggatcacgcg aggcgctatt
     1801 tgcgtttgcc caaacggtca ttaatcccga gaacaaaggt ttggtggtct gccctaaccc
     1861 cttctaccag atctatgagg gcgcagcatt gttagcaggc gcaacccctc attacatcaa
     1921 tgccaccgct gagaacaact ttttgtgtga ctgggcaagc gttgacatag acgtctggcg
     1981 ccaaaccgag ttgctctacg tctgcaaccc cggcaaccct gccggtagcg tcatgccatt
     2041 gtccgattgg gagttgctgt ttgaactggc cgatgaacat gactttgtca tcgcatctga
     2101 cgagtgctat agcgaaatct acctcgatga gggcagcccg ccacttggcg ggctgcaagc
     2161 ggctgtcgca cttgggcgca acgacttcag gcgtctggtg agtttttcca gtttgtctaa
     2221 gcggtctaac ttgccgggat tgcgctctgg atttgtggct ggtgatgcaa atctcataag
     2281 ccgctttttg ttgtatcgca cctatcacgg cagtgccatg tcaggcgtag tgaccgccgc
     2341 aagcctagct gcttggcagg atgaggcgca cgtcaaacac aaccgccagg cctatcgcga
     2401 caaattcgat gcggtgctag agattctctc acccgtgctc aatgtcgcac gtccacaagc
     2461 ctccttttac ttatgggcac cgacaccgta tgacgacgca cagttcaccc gtgacttgct
     2521 tgaccaacaa gcggtcaagg tattgccagg cagctatgtc agccgcaccg ccgacggaca
     2581 aaacccgggt gctaaccgaa ttcgaatcgc tttggtcgct ccccttgaag cttgtgtcga
     2641 aggtgcccat cgcattgcat cgttcgcacg acagttggac tgatcgcacc tcacgccact
     2701 aagccatacc ccgggaaggc atctgcacaa ccgaacaaac gtcgtcacaa ttggctacac
     2761 tttgacactt tgtgacggta cgctcaccac cacggatatc gctttaaacc ttgtaaccat
     2821 tcaatattga ttgtttaagg aacaacaaca ccatgacact tgaccttcaa accaccatcg
     2881 aagctggctg gcaaggccgt gacggcctat cgcccgaaga cgctgaaccc gcactgcgcg
     2941 aagccattga acacgccatc gacggccttg atcaaggcac cttgcgtgtc gcagaaaaaa
     3001 ttgacagcca gtgggttgtg caccagtggc ttaagaaagc agtgctcctg tcgtttcgtc
     3061 tcaataacaa cgaagtcatt gcgcacggcc cactggagtt ttatgacaaa gtgcctttga
     3121 agttcacagg ctacggcgaa cacgcgttca aagcgggtgg ttttcgtgtg gtgccgcccg
     3181 ctgtggcgag acgcggctcg cacatcggtc gtaacgtggt gttgatgcct tcgtacgtga
     3241 atatcggtgc ttttgttgat gatggcacga tggtcgatac ctgggccacc gtgggcagtt
     3301 gtgctcagat cggcaaaaac gtgcacttat ccggtggtgt gggtatcggt ggcgtgcttg
     3361 agccgctgca agccaacccc accatcattg aagataactg cttcattggc gcacgctcgg
     3421 aagttgtcga aggcgttgtg gtcgaagaaa actcagtgct agctatgggc gtctttctgt
     3481 cacaaagcac gcgcatctac gatcgcgaaa ccaagcaaat ttcttatggg cgggtgcctg
     3541 ccggatccgt ggttataccc ggttcactgc cctcgaaaga tggcagccac agcttggcgt
     3601 gtgcggtaat tgttaaaaaa gtcgatgccc agacccgagc taaaaccagc atcaacgatc
     3661 tgttaagggc ttaaaagggc ttaatcgcat ggacaccccc gtacttgaac tgaccaaaaa
     3721 cctcatcgag cgcccttctg taacgcccga tgaccaaggc tgccagcaat tgatcattga
     3781 tcgactgaca cccttggggt ttgaagctca cgccattgaa caagggggtg tcaccaattt
     3841 gtggatacgc cgcggccagg tcgcaccatt ggtggtcttt gccgggcaca ccgatgtggt
     3901 gcctacaggg ccgcttgatc gttggtattc ggatccattt gtgcccacac taaa
//
LOCUS       DATBNL010000146         1788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_91479, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000146 DATBNL010000000
VERSION     DATBNL010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91479"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(179..1114)
                     /locus_tag="VIC30_02495"
     CDS             complement(179..1114)
                     /locus_tag="VIC30_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HEY7803291.1"
                     /translation="MSHAVLICGSVAFDTIAVFDGRFREHILPDRIHALSVSFLVPQM
                     RREFGGCAGNIAYNLKLLGGQPLPVATIGGDAEDYLKRFEQHGIDTRHIEVLPDMFTA
                     QCFITTDLDDNQISAFHPGAMERSADNVVGDHQAAWAIVAPDSKAGMLAHVERFAAAG
                     TPFIFDLGQAMPLFDGAELKGVFDKASALAFNDYEASVVEQRTGMSVQDIAQQMQAVI
                     VTRGAEGATVYTPGQRTDIAPVKADAVVDPTGCGDAHRAGLLHGLTQGWSWEKSCMLG
                     NVMGAIKIAHRGPQNHAPNRDQITQLMMQSFGIGF"
     gene            complement(1199..>1788)
                     /locus_tag="VIC30_02500"
     CDS             complement(1199..>1788)
                     /locus_tag="VIC30_02500"
                     /inference="COORDINATES: protein motif:HMM:NF023334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3426 domain-containing protein"
                     /protein_id="HEY7803292.1"
                     /translation="VKVMGESRLRGDDPSAAGRTVPEFLEDVDEEPLATRLYWVLGSI
                     VLAVALVVQSLVTFRNDIVSALPSLRPLLVTVCAPLSCDVSYVRQIERIFIVGSALQQ
                     DPDATVPPNQRAYNLRLTLQNQGAYPQPWPALMVTLTDASGTPVIKKALMPSQFLPPE
                     LLEGPFQAKQEVGLDIPLRVRGLSISGFELDRFFP"
BASE COUNT          465 a          526 c          425 g          372 t
ORIGIN      
        1 gcgacaacta gcaccccagc cagcagcgcc aagcgttgaa cgattttaat tgacccaaaa
       61 aattgagtgg cttgcatgtc ttttttctcc cactatccaa acgacacaat gatgctcacg
      121 ccctgactca acaggtagac gcttgcagcg gtcatcgtct caaatcccac ccctcatatt
      181 aaaacccaat cccaaagctt tgcatcatta actgtgtaat ttggtcacga ttgggagcat
      241 ggttttgtgg tccgcgatga gcgattttaa tggcacccat gacattgccg agcatgcagg
      301 atttctccca cgaccaccct tgcgtcaaac catgaaggag cccggcgcgg tgggcgtcac
      361 cgcagccggt ggggtcgaca actgcatctg ctttgactgg tgcaatatca gttcgctggc
      421 ctggtgtgta caccgttgcg ccttcagcac cgcgcgtgac aatcactgcc tgcatctgct
      481 gggcaatgtc ttgcacactc atcccggtgc gttgttcaac gacactggcc tcatagtcgt
      541 taaatgccaa ggcacttgcc ttgtcaaaca caccctttag ctcggcacca tcaaataacg
      601 gcatggcctg cccgaggtcg aagataaacg gtgtaccggc ggccgcaaag cgctcgacat
      661 gcgcgagcat cccagccttg gagtcgggtg ccacgatcgc ccaagcggct tgatggtcac
      721 cgacaacatt gtccgcactg cgctccatgg cgcccgggtg aaaagcactg atttgattgt
      781 catcaaggtc cgtggtgatg aagcactgtg ccgtgaacat gtcaggcaat acctcaatgt
      841 gccgggtatc aataccgtgc tgttcaaatc gctttagata atcttcagcg tcaccaccaa
      901 tagtggccac aggcaagggt tggccgccaa gcaacttcag gttataggca atattgcctg
      961 cacaaccacc aaattcacgc cgcatctgtg gtactagaaa cgacacactc aacgcatgaa
     1021 tacgatcggg caagatgtgc tcacgaaagc gcccatcaaa taccgcaatc gtgtcaaacg
     1081 cgacagaacc acaaatcaaa acagcatggg acataatcaa ttacccgaga atcgcgggcc
     1141 cttttgtgaa gttcaaaaca tgttgtggcg cagcccatat ttgctgcgca agatccgctc
     1201 agggaaaaaa ccggtccaac tcaaatccgc taatcgacag cccccgaacg cgcaaaggaa
     1261 tgtctagccc aacctcctgc ttagcctgaa acggaccctc tagtaattca ggtggcaaga
     1321 actgcgatgg catcaatgcc ttttttatca caggcgtacc cgatgcgtcc gtcaaggtaa
     1381 ccatcaacgc tggccaaggt tgcgggtacg ccccctggtt ttgcaaggtc aggcgcaagt
     1441 tatacgcacg ctgattaggt ggcaccgttg catccgggtc ttgttgcaaa gctgaaccca
     1501 caataaaaat ccgctcaatc tgtcgcacgt aactaacgtc acacgaaagc ggtgcgcaca
     1561 cagtcacaag caaaggccgc agactcggca atgccgagac aatgtcattt ctaaacgtta
     1621 cgagcgactg cacgactagc gctacggcca agacaataga ccctagcacc caataaagac
     1681 gagtagccag tggctcctcg tctacatctt cgagaaactc aggcacggtc cgacctgcag
     1741 ccgatgggtc atcaccacgc aggcgcgact cccccatgac tttaacag
//
LOCUS       DATBNL010000147         2888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_170881, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000147 DATBNL010000000
VERSION     DATBNL010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2888
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170881"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /gene="thpD"
                     /locus_tag="VIC30_02505"
     CDS             complement(<1..825)
                     /gene="thpD"
                     /locus_tag="VIC30_02505"
                     /EC_number="1.14.11.55"
                     /inference="COORDINATES: protein motif:HMM:TIGR02408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine hydroxylase"
                     /protein_id="HEY7803293.1"
                     /translation="MNKTLEHSAVNQDRYPSRISDTPAVIARQDPVVYGKASDGPLDQ
                     ATLDLYEDNGLLHFESLFSETDLQSWLDELHRLRSSQAIKSSPEAIVEPQSQELRSVF
                     AVHQLSDVMRCLAAHPKIVSIAQQLLGGPVYVHQSRINYKGGFRGKEFYWHSDFETWH
                     VEDGLPAMRTVSCSISLTPNTPYNGPLMLIPGSHHRFIGCVGQTPEDHYKASLSRQEL
                     GVPDDESLTKLVQDFGIVAPTGAAGSVTFFECNTMHGSSSNITPMPRSNIFIVYNSL"
     gene            complement(882..1271)
                     /locus_tag="VIC30_02510"
     CDS             complement(882..1271)
                     /locus_tag="VIC30_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine synthase"
                     /protein_id="HEY7803294.1"
                     /translation="MIVKRLEDILGTEADVDTEGWTSRRLIYKDAGMGYSVNDTIIKP
                     GAELEMEYRNHLETVYCIEGAGEILDLATGQTHDIAPGTIYALNNHDRHILKANKGTH
                     MRMVCVFNPPLTGREVHDETGAYAVSD"
     gene            complement(1291..2553)
                     /gene="ectB"
                     /locus_tag="VIC30_02515"
     CDS             complement(1291..2553)
                     /gene="ectB"
                     /locus_tag="VIC30_02515"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005020055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045303 - diaminobutyrate-2-oxoglutarate
                     transaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HEY7803295.1"
                     /translation="MNIFEQYESEVRGYCRAFPAVFSSAKGAWMTDTSGQRYLDFFSG
                     AGVLNYGHNNDRIKQPLVRYLLGDGITHTLDMYSEAKQRFIQRFNDVILKPRGLSYKF
                     QFPGPTGTNAVEAALKLARKVTGRQTVVNFTNAFHGMTLGSLAVTGNSFKRAGAGVPL
                     HHTASVPFEGYLGQDIDTLEYLEAMLLDNGSGMEVPAAVIVETVQAEGGVNVASMQWL
                     KRLREITKAHDIVLIIDDIQVGCGRTGAFFSFEDAGIEPDIITLSKSLSGYGLPLALV
                     LIKPELDVWSPGEHNGTFRGHCPAFVTATAALDFWVDNTFEMSVRKKSKLVERRLNAM
                     VQDENLQADVRGRGLIWGVEFTDRELAGHISQACFERGLIIETAGIDDQVLKLLPSLT
                     ISEDDLNHGLDIIEQSLQAVLQEATAQA"
     gene            complement(2629..>2888)
                     /locus_tag="VIC30_02520"
     CDS             complement(2629..>2888)
                     /locus_tag="VIC30_02520"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7803296.1"
                     /translation="VPAWQGKGLGKRMLSAWLALPANQGVQWLTATVADDNLASDRLF
                     QGFARELNVTCSIQPHFTQALLQPGHRPEPLYRIGPIHTAR"
BASE COUNT          718 a          815 c          694 g          661 t
ORIGIN      
        1 caggctgttg tagacaataa agatattgct gcgtggcatc ggcgtgatgt tcgaacttga
       61 gccatgcatg gtgttgcact caaaaaacgt cacagagcct gctgcaccag tcggtgcgac
      121 aatgccgaaa tcctgaacca acttggtcaa gctttcatcg tctggcacgc caagctcctg
      181 gcgacttaac gacgctttgt agtgatcctc aggggtctgc cccacgcaac cgatgaaccg
      241 atggtgtgag cctgggatca acatcaacgg cccgttatag ggcgtattcg gtgtcagact
      301 gatcgagcag ctcacggttc tcatggctgg caggccatcc tcaacatgcc aggtctcaaa
      361 gtccgagtgc caataaaact ccttaccccg aaagccgccc ttgtaattga tccgcgactg
      421 atgcacgtag accgggccgc cgagcagttg ctgggcaata ctcacaatct tggggtgtgc
      481 ggctaggcaa cgcatcacat cacttaattg atgcacagca aatacggatc gcaactcctg
      541 actctgcggc tcaacaatcg cctccggtga ggacttaatg gcttgactgc tacgcagacg
      601 gtgcaactca tcaagccaac tctgcagatc cgtttcacta aacagtgact cgaaatgtaa
      661 caagccattg tcctcgtaca gatcaagcgt ggcctgatct aaaggcccat cgcttgcttt
      721 accgtacaca acgggatctt ggcgagcgat caccgcaggt gtgtcagaga ttcgagaggg
      781 atagcggtct tggttgaccg ctgagtgttc cagtgtttta ttcatctggt ttttctccta
      841 tcgcagtcga tttcgaacaa acgcaaagca ctagttacta actagtcact gacggcataa
      901 gccccagttt catcatgcac ctcacgaccg gtcaatggcg ggttgaacac gcacaccatg
      961 cgcatgtgcg tgcccttatt cgcctttaag atgtgtcgat catgattgtt cagtgcatag
     1021 atcgtgccag gcgcaatatc atgagtttgg ccagtggcca aatccaaaat ctcaccagcc
     1081 ccctcaatgc agtagaccgt ctcgagatgg ttgcgatact ccatctcaag ttcggcaccg
     1141 ggcttaatga tcgtgtcatt aaccgagtac cccatgcctg cgtccttgta gatcaaacga
     1201 cggctggtcc aaccctcggt atccacatca gcctcggtgc ctaaaatatc ttccagtctt
     1261 ttaacaatca tgctcgtttc tcccgatcta ttaagcttgt gctgtggctt cttggagcac
     1321 ggcctgcaga ctttgctcaa tgatgtccaa accgtgattc aagtcgtctt cgctaatggt
     1381 caagcttggc aatagcttca gcacctgatc gtcgatacca gcggtttcaa ttatcaagcc
     1441 ccgctcaaaa caagcctgtg aaatatgacc ggctaattcg cggtcggtaa attccacgcc
     1501 ccagatcaga ccgcgaccac gcacgtcggc ttgaaggttc tcgtcttgca ccatcgcgtt
     1561 taggcgacgt tcaacgagct ttgacttctt gcgcactgac atctcaaacg tgttgtcgac
     1621 ccagaaatcc agcgctgcag tggcagtcac aaaagctggg cagtgaccac gaaacgtgcc
     1681 gttatgctca cccggagacc acacatcaag ctctggctta attaacacca acgccagtgg
     1741 caaaccgtaa ccagacagtg atttcgacag cgtgataatg tcgggttcaa tgccggcatc
     1801 ttcaaagcta aagaaggcac cagtacgtcc acaacccact tgaatatcat cgatgatcaa
     1861 cacaatatcg tgggctttgg taatttcgcg taaacgcttt aaccattgca tgcttgcgac
     1921 attgacacca ccttcggctt gcaccgtctc aacgatcaca gccgccggca cttccatgcc
     1981 actgccgtta tcgagcagca ttgcctcaag atactcgagc gtatcgatat cctgacccag
     2041 atagccttca aatggcaccg aagccgtatg gtgcaaaggc acacccgcgc cggcacgctt
     2101 aaaactatta cccgtcacgg ccagcgagcc caaggtcata ccgtgaaacg cgttggtgaa
     2161 gttcaccaca gtctggcgcc cagtcacttt gcgcgcgagc tttaaggctg cttcaacggc
     2221 gttggtgcct gtgggtccag gaaactggaa cttgtatgac aaaccgcgcg gcttgagaat
     2281 gacatcatta aaacgctgaa tgaaacgctg cttggcttca ctgtacatat caagcgtgtg
     2341 ggtaataccg tcgccaagca aatagcgcac cagcggctgc ttgatacggt cattgttgtg
     2401 accatagttc agcacacctg cgccactgaa gaaatctaaa tagcgctgtc cgctggtgtc
     2461 agtcatccag gcccctttgg ccgatgagaa caccgccgga aaggcgcggc agtaaccacg
     2521 aacctcggac tcgtattgtt caaagatatt catgctattt acctccattt gtgacctggg
     2581 gacaatcaaa aagatcaacc gcccacacca ggtcggttta agcacgttct agcgtgcagt
     2641 gtgaatcggg ccaatgcgat aaagcggctc aggacggtgg cctggctgca aaagcgcctg
     2701 cgtaaaatgc ggttgtatgg aacaagtaac gttcaattct ctggcgaagc cttgaaacag
     2761 gcgatcagac gccaggttgt catcagcaac agttgcagtt agccactgca ccccttggtt
     2821 ggcaggcaat gccaaccaag cagacaacat acgtttgccc aaccccttgc cctgccaggc
     2881 cggcacaa
//
LOCUS       DATBNL010000148         3610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21804, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000148 DATBNL010000000
VERSION     DATBNL010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3610
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21804"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VIC30_02525"
     CDS             <1..259
                     /locus_tag="VIC30_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803297.1"
                     /translation="IHEPFLQTLVDQAQAGFDQIDAQIAAGQFAGVSNPSIADITAAV
                     GYTFASTMLPEVCDAQRHSALATFAEGFEQTEAFKVCQFQV"
     gene            268..1515
                     /locus_tag="VIC30_02530"
     CDS             268..1515
                     /locus_tag="VIC30_02530"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803298.1"
                     /translation="MTSGVSKAQPAFYGWRVVKGTLAVAFVAWGFALYGPSVYIDALS
                     RIHGWSTSSVSLALSMAFLVNALSIGFVGTLIGRHGPQAVMSVGAIVMASGIAALGLV
                     SEPWQMVAAFIAMGLGWSCLSTIAVSATIAPWFEKYQGRAISTALLGASLGGMLGVPI
                     TLMLVQGFGFTTAMTAIGVIIVVTVLPISLFVLKRRPQDLGLWPDGMPPEVRETPIDD
                     QQWTRTSALKTFALRSTIITFGLALMVQLGFLSQQVKLLQTEISPTLTGLTVLASGSL
                     AFAGRVVLARLADQVNIRVAAALVLVLAAAGLLVAAWAQTGMWLIVGVLLFGLNVGNL
                     TTLPALIVRREFGAASFGKVFGITGTFMQLLNACGPALFGLLHDSTGGYQTPILIAAT
                     VMLAGSLLITYGQWPWQRVKAIN"
     gene            complement(1542..2417)
                     /locus_tag="VIC30_02535"
     CDS             complement(1542..2417)
                     /locus_tag="VIC30_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013393803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY7803299.1"
                     /translation="MSNPRVAYRFSDAGPTLTAHRDGPIMVHLVVNVENWSFDAAMPR
                     TIITPPHGKETIPDVPNFAWVDYGMRAGLPRMIEAIRARGLPASTSINASVIDAYPGA
                     AEAMLQAGWEFIGHGLQQKSVQQAGREEDVVEQALAKLRGFSGQAVAGWLSPGLRQTE
                     RSLEVFKQAGVRYTFDWCMDDVPNWMRTDNGPIMSMPYNLELNDSVIYAVEKHATGQF
                     LDRTRRTLSVFEREAEHRPRVLALGLHPHLMGVPHRFGEFEDMLDALLASQNTVFLKP
                     AQIADWFEQQVPAQC"
     gene            complement(2485..3264)
                     /locus_tag="VIC30_02540"
     CDS             complement(2485..3264)
                     /locus_tag="VIC30_02540"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY7803300.1"
                     /translation="MPEIRSETDADGITVVTLSNPDRRNAMTLAMWQSLAQTMDRLSE
                     DASVRVVVLRGHGEAAFASGADISEFDQVRSNTQNIAVYDACVEQAETAVGACRKPVI
                     AAIRGACYGGGVGIAASCDLRYVDTTARFSVPAGKLGLGYPLSDIKRLHRLMGASGTT
                     ELLLTARVYEGEQAVKAGLAHACVDDVFAHTMAQAQTMSALAPLTLASVKMTLQHLDE
                     VPGAPSRADVDAAVATCFASDDYIEGRQAFAQKRTPQFKGR"
     gene            complement(3266..>3610)
                     /locus_tag="VIC30_02545"
     CDS             complement(3266..>3610)
                     /locus_tag="VIC30_02545"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7803301.1"
                     /translation="NRPRLTELLEAEFAKNTVHYWVTELNRAGVPAGPVYDVPEVFED
                     EQVKHLGVVASLPEVYGKAMHYITQPMTLSRTPPEVKTPAPGWGEHTDEVLTEIGYGE
                     SEIKQLHDDGVV"
BASE COUNT          783 a         1049 c          947 g          831 t
ORIGIN      
        1 aattcacgag ccgtttctgc agacgttagt cgaccaagcc caagccgggt ttgatcaaat
       61 cgacgcacaa atcgcagcag gtcagtttgc cggtgtctcc aatccatcga ttgcagacat
      121 cactgctgcc gtcggctaca cctttgccag caccatgctg ccagaagtct gtgatgcgca
      181 acgccatagc gcgcttgcaa cattcgccga gggatttgaa caaactgagg ccttcaaagt
      241 ctgccagttt caggtgtgac gtcagatgtg acttcaggtg taagcaaggc gcaacccgcg
      301 ttctatggct ggcgtgtcgt taaaggcacg ctggcagtgg catttgtagc ttggggtttt
      361 gctctttacg ggcctagcgt ctacatcgat gctttaagcc gtatccatgg ctggtccacc
      421 tcaagcgtgt cattggcgct gagcatggca tttttagtca atgccctatc gattggcttt
      481 gtggggacac tcattggtcg tcacggaccg caggctgtca tgagtgtggg tgccattgtc
      541 atggcaagtg gtattgcggc ccttggcttg gtctctgagc cttggcagat ggtggcagcc
      601 ttcatcgcca tgggactggg ctggtcatgt ttgtcgacca ttgccgtgtc agccacgatc
      661 gcgccttggt ttgaaaaata ccaaggacga gcgatctcaa cggcactgct cggcgcaagc
      721 ctgggcggga tgctgggtgt gccgatcacg ctgatgctgg tgcaaggctt tggtttcacc
      781 actgcgatga ccgccattgg tgtcatcatt gtggtcactg tgttgcccat cagtctcttt
      841 gtgctcaagc gtcgccctca ggacctcggt ctgtggcccg atggcatgcc acccgaagtc
      901 cgcgagaccc ccattgatga ccagcaatgg acacgaacat cagcgcttaa aacctttgcg
      961 ctgcgatcaa ccatcattac ctttgggttg gcactgatgg tgcaactcgg gtttctgagc
     1021 caacaagtca aactgctgca aaccgagatc tcccccacac taaccggctt aacggtactg
     1081 gcctccggct cactggcgtt tgccggacgc gtggtgttgg cacgcctggc cgatcaggtc
     1141 aacatccggg tggccgctgc gctcgtactg gtgcttgcag cagcgggttt gctggtagct
     1201 gcttgggcac aaacaggcat gtggcttatc gtaggggttc tgttgttcgg tttgaacgtg
     1261 ggtaatctca ccactttgcc agccctgatt gtgcgacgcg aattcggcgc ggcttcgttt
     1321 ggcaaagtgt ttggtattac cggtactttt atgcagttgc taaacgcctg cggaccagcc
     1381 ttgttcgggt tgttacatga cagcacaggg ggctatcaga caccgatact gatcgcagcc
     1441 actgtgatgc tcgcaggcag tctactcatc acctacggcc agtggccttg gcaacgggtc
     1501 aaagccatca attagcaaac caaccactaa aacaccaatc actaacactg agccggcacc
     1561 tgttgctcaa accagtctgc tatctgcgcc ggctttaaaa acaccgtatt ctgactcgct
     1621 agcaacgcat ccagcatatc ttcaaactcg ccaaaccggt gcggcacgcc catgagatgt
     1681 gggtgtagcc ccagggccag gacacgaggc cgatgctcag cctcgcgctc aaacacgctc
     1741 agcgtgcggc gcgtgcgatc cagaaactgc cctgtggcgt gcttctccac ggcataaatc
     1801 accgaatcat tgagctcgag gttatagggc atactcataa taggaccgtt atcagtacgc
     1861 atccaattcg gtacatcgtc catgcaccag tcaaatgtgt aacgcacccc agcctgctta
     1921 aacacctcta ggctacgctc tgtctgacgc aagccaggac ttaaccatcc cgccaccgcc
     1981 tgtccactaa agccgcgcag tttagccagt gcttgttcaa cgacatcttc ttcacgaccg
     2041 gcttgttgta ctgacttctg ttgcaaacca tgaccgataa actcccagcc agcttgcaac
     2101 atcgcttcgg cagcaccagg gtaggcatca atgacgctgg cattgatgct tgtcgatgcc
     2161 ggcagccccc gcgcacgaat ggcttcaatc atgcgcggca gaccagcacg catgccatag
     2221 tccacccagg cgaagttcgg tacatccggg atggtttcct taccgtgcgg tggcgtgatg
     2281 atggtgcgcg gcatggccgc atcaaaactc cagttctcca cattgaccac caaatgaacc
     2341 atgatgggac catctcggtg ggcagtcaac gtgggccctg catcagaaaa ccggtacgca
     2401 acgcgtggat tactcatcga tcatcctatg tgtatgacta tggattaaac aattttgggc
     2461 gaaggcgccg aaagcggcgc caatctagcg tcctttgaac tgcggtgtgc gtttttgtgc
     2521 aaacgcttgg cgaccttcga tgtaatcatc actggcaaag caagtggcaa cagcagcatc
     2581 gacatcagcc cgacttggtg caccgggcac ctcatccaag tgttgcaagg tcattttgac
     2641 ggaagcaagc gtcaaggggg ctaatgcaga catggtttga gcttgcgcca tggtgtgggc
     2701 aaatacatcg tcaacacagg cgtgcgctag acctgcttta accgcttgtt cgccttcata
     2761 tacgcgcgct gttaacaaca gctctgtggt acccgacgcc cccatcaaac gatgcaagcg
     2821 tttgatgtcc gacaatggat agcccaaccc aagtttgccg gctggcacac taaagcgcgc
     2881 ggttgtatcg acatagcgca agtcgcaaga tgcggcaatg cctacaccac ccccgtagca
     2941 ggcaccgcgg atcgccgcga tgacgggctt gcggcatgcg ccgacagccg tctcagcctg
     3001 ttcaacacaa gcatcgtaaa ccgcaatgtt ctgcgtgtta ctgcgcactt gatcaaactc
     3061 agaaatatca gcacctgagg caaaggccgc ctcaccgtga ccgcgcaaca ccaccactcg
     3121 aaccgacgca tcttcactta gccgatccat ggtctgtgcc aatgactgcc acatagccaa
     3181 agtcatcgcg ttgcgtcgat cgggattgga tagggtcaca acggtaatgc catctgcatc
     3241 cgtttcagat ctgatctctg gcatgtcaaa ccaccccgtc atcgtgcagc tgcttgatct
     3301 cgctttcacc gtagccaatt tcagtcaaca cctcatcggt gtgctcaccc caccccggtg
     3361 ctggggtttt aacttcaggt ggcgtgcgcg acaacgtcat gggctgggtg atgtaatgca
     3421 tggccttgcc ataaacctcg ggcaacgacg ccacgacacc gaggtgcttg acttgttcat
     3481 cttcaaatac ttccggcacg tcatataccg ggcctgcggg cacacctgca cggttcagtt
     3541 cggtcaccca ataatgcacc gtgttcttag cgaactcagc ttcgaggagt tccgttaatc
     3601 tcggtcggtt
//
LOCUS       DATBNL010000149         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_141155, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000149 DATBNL010000000
VERSION     DATBNL010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141155"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /gene="rseP"
                     /locus_tag="VIC30_02550"
     CDS             complement(<1..780)
                     /gene="rseP"
                     /locus_tag="VIC30_02550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEY7803302.1"
                     /translation="MFTTIIAFIVALGIIITFHEYGHYWAAKRCGVKVLRFSVGFGKP
                     LLKRIDRSGTEWVLAGIPLGGYVKMQDEPEPGDTPEQAKQAFANQPVKNRFFIVSAGP
                     IANFILAAVIYAALSMMGSQEPEAVLGQPPANTAAAQAGLQSGDRVLAVNGSPVASWN
                     QMRWEMLDDMVQGGTVNLTVDRLGSTLTTPVQLPGAGSDPEADTLALAGVRLQPGKTV
                     ITSVVPDSAAQAAGLATGDVIVSIDGQPVTDTRALIETVQAR"
     gene            complement(783..>1843)
                     /gene="dxr"
                     /locus_tag="VIC30_02555"
     CDS             complement(783..>1843)
                     /gene="dxr"
                     /locus_tag="VIC30_02555"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEY7803303.1"
                     /translation="AVVVPDDASAQKFRQAWSFEPPLPDIRVGAQALVDTAKEEGVDT
                     IMAAIVGIAGLPAVLAAAQAGKRVLLANKESLVAAGGLLMAAVQDNGATLLPIDSEHN
                     AIFQCMPVCRQTGLAVHKTGVSRLVLTASGGPLRQWPLTDLPSVTPQQACAHPNWDMG
                     QKISVDSATMLNKGLEVIEAHWLFAMSPDQIDVLIHPQSIVHSMVQYTDGSVLAQLGN
                     PDMRTPIAHALGFPERLAAGVDMLDLAAHGKLEFEPVEAQRYPCLELAYEAMRQGQSA
                     CITLNAANEVAVDAFLQGKIKYLDIARSVHATLNWHTQSAQVVINNLDDILAVDEAAR
                     AFARGCLQTSGSSIHRSA"
BASE COUNT          435 a          539 c          475 g          394 t
ORIGIN      
        1 tctggcctga accgtttcaa tcaatgctcg tgtgtctgtg acaggctgac catcgattga
       61 cacaataacg tcaccagttg caagacctgc cgcttgtgcc gcactgtcag gcaccacact
      121 cgtgatgacg gttttaccag gctgcaaccg tacgcccgca agcgctagcg tgtcagcctc
      181 cgggtcagaa cccgcaccgg gcaactgtac tggtgtagtt aaagtgctac ctaagcggtc
      241 gaccgtcaga ttaaccgtac caccttgaac catgtcatcg agcatctccc aacgcatctg
      301 gttccacgag gcaaccggac tgccgttaac ggcaagcaca cgatctccac tttgcagacc
      361 tgcttgagct gcggcagtgt tagccggcgg ctggccaaga acggcttctg gttcctggct
      421 acccatcata ctgagggcag cataaatcac agcagccaga atgaagttgg caataggacc
      481 ggcgctcaca atgaagaaac ggttcttaac aggctgattc gcaaacgctt gttttgcttg
      541 ctctggtgtg tcgccaggct caggctcatc ttgcattttg acgtatccac ctaacgggat
      601 gcccgcgagc acccactcgg taccgctacg gtcgattcgt ttgagcaacg gcttgccaaa
      661 cccgacagag aagcgcaata ccttgacgcc acagcgcttt gctgcccaat agtgaccgta
      721 ctcatggaag gtgatgatga tgccaagcgc aacgataaag gcgatgatag tagtgaacat
      781 ggctaggcag accggtgaat ggatgaacca ctagtttgaa ggcaaccgcg cgcaaaggct
      841 cgcgcagcct catcaaccgc aaggatatca tcgaggttgt tgatgacaac ttgcgcggac
      901 tgcgtatgcc aattgagcgt agcatgcacc gaacgcgcaa tatccagata cttgatctta
      961 ccctgtaaaa acgcatcgac tgccacctca ttggctgcgt ttagcgttat acaagcactt
     1021 tgaccttgac gcatggcttc ataggccagt tctaggcatg gataacgctg tgcctctact
     1081 ggctcaaact caagcttgcc gtgcgcagcc aaatccaaca tgtccacacc cgccgctagc
     1141 cgttctggaa aaccaagcgc atgcgcgatc ggtgttcgca tgtcggggtt accaagctga
     1201 gctagaacgg agccgtcggt gtattgcacc atcgagtgca caatactttg cgggtgtatc
     1261 aacacgtcaa tctggtcagg gctcatggca aatagccaat gcgcctcaat aacctctaaa
     1321 cctttgttga gcatggtggc cgaatcaacc gagatttttt gccccatatc ccagttggga
     1381 tgcgcacaag cctgttgggg ggttaccgat ggtaagtctg tcaatggcca ttgacgcaaa
     1441 ggcccgccag aagccgtcag aaccagacga cttacgcccg ttttatggac cgcgagcccg
     1501 gtctgtcgac ataccggcat gcactgaaat atggcattgt gttcgctgtc aatcggcaac
     1561 aacgtagcac cgttgtcttg aaccgctgcc atcaagaggc cgccggcggc aaccaatgac
     1621 tccttgttcg ccaacaacac ccgcttgccc gcttgggcag ccgccaaaac cgctggcagc
     1681 ccggcaatgc caacaatggc tgccatgatc gtgtcaacgc cctcttcttt tgccgtgtca
     1741 accagtgctt gggcaccaac gcgaatgtcg ggcagcggcg gttcaaagga ccacgcctgc
     1801 cggaatttct gagcgcttgc atcatccggt acgaccacgg cca
//
LOCUS       DATBNL010000150        10715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_151184, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000150 DATBNL010000000
VERSION     DATBNL010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 10715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10715
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151184"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..144
                     /locus_tag="VIC30_02560"
     CDS             <1..144
                     /locus_tag="VIC30_02560"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393980.1"
                     /note="catalyzes the formation of L-histidinol phosphate
                     from imidazole-acetol phosphate and glutamate in histidine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEY7803304.1"
                     /translation="LAGWLRERAILVRHFKRPRVDQFIRITVGTSEQCASLISALRAC
                     VCP"
     gene            278..514
                     /gene="hfq"
                     /locus_tag="VIC30_02565"
     CDS             278..514
                     /gene="hfq"
                     /locus_tag="VIC30_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003799329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEY7803305.1"
                     /translation="MSNKGQTLQDPFLNVLRKEHIPVSIYLVNGIKLQGQVESFDQYV
                     ILLRNTVTQMVYKHAISTVVPAKAVSLSAEESAE"
     gene            548..1654
                     /gene="hflX"
                     /locus_tag="VIC30_02570"
     CDS             548..1654
                     /gene="hflX"
                     /locus_tag="VIC30_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEY7803306.1"
                     /translation="MKAMVIGVDLGSPDYVANRQEFDMLATSAGAELVGEITAKRDRP
                     DAATFIGSGKVQEAVDLCQACEADVVLFDQPLSPAQQRNLERKLNCRVVDRVALILDI
                     FALRAKSHEGKLQVELAQLQHLATRLTRLWTHLERQRGGIGMRGPGESQLEMDRRMIG
                     SKVKVLRERLQKVQRQRVTQRRARARGAALSVSLVGYTNAGKSTLFNALTRADAYAAD
                     QLFATLDTTTRRLWIDEAGSVTLSDTVGFIRELPHTLIAAFRATLEEAIHADLLLHVV
                     DASSEQRDDQIHEVQKVLAEIGAADVPQLLIYNKIDNLGISPRIERETHGTIHKVFIS
                     AQRREGLSLVRQAIAEFATCAGNHATNDQTSEFE"
     gene            1620..2999
                     /gene="hflK"
                     /locus_tag="VIC30_02575"
     CDS             1620..2999
                     /gene="hflK"
                     /locus_tag="VIC30_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018574549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEY7803307.1"
                     /translation="MRRMTKLLNLNDPGWGRGNANDPQKPEPTRQEPPRRPNNQDGPP
                     DLDQVWRDFNRKLKGLFGNKGGGPRRPWPPQPPESGGSGSGGPTPRQTKFGFGIVGAV
                     VVLLWLGSGFFIVQEGQVGVITQFGAYKSTAAPGFQWRMPYPIQQTEMVDVSQLRTFE
                     IGYRGNARNKVPPEALMLTSDENIVDVQFVVQYRVKPDGAPDYLFETRDPDQSVNQVA
                     QSSMREVVGRSLMDFVLYEGRTQVASDVQRSMQEVLDRYKTGILVSAVAIQNVQPPEQ
                     VQAAFDDAVKAGQDRERQINEGEAYRNQVVPLAQGTASRMLEQAEGYKAKVIGDARGN
                     TARFLSILEQYLVSPNVQRERMYLDTMQDMFARSSKVFIDTEASNSMLYLPLDRIMQQ
                     SARGAAGSSSIGMSDGMSGQSGSSSGSGSNSSSTNSSSNTSNTNSNQRPSLRETFSGS
                     FSRDRNASR"
     gene            3010..3915
                     /gene="hflC"
                     /locus_tag="VIC30_02580"
     CDS             3010..3915
                     /gene="hflC"
                     /locus_tag="VIC30_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015063928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEY7803308.1"
                     /translation="MSNKVVALLVALAVVVGILSTSVFIVRERDFALVFALGEVRRVI
                     KEPGLYFKLPPPFQNIVMLDKRLLTIESQEAERIQTSEKKNLLIDSFVKWRITDPRVY
                     YITFAGNERAAELRLQAQIRDALNASVNIRTVRDVVALERDVIMEEVRDNVRRRAAPL
                     GVDIVDVRLKRIEFAPEIAESVYRRMESERLRVANELRSIGAAEGEKIRAGADREREV
                     IVAEAFAKAQATMGEGDAEAAKLYGQAYGQDEDFYSFYKSLEAYRAAFGKSSDVLVVD
                     PSSDFFRFMKSPSGNPPSGNPAPSN"
     gene            4028..5209
                     /locus_tag="VIC30_02585"
     CDS             4028..5209
                     /locus_tag="VIC30_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEY7803309.1"
                     /translation="MNGNWLLPDYLADILPAQARQIEDLRRKLLDLFRSFGFETVSPP
                     MLEYIESLLTGSGKDLSLKTFKLVDQLSGRTLGLRADMTPQITRIDAHLLNRPGVTRL
                     CYCGPVLHARPAGLVSSREQLQIGAEIYGYAGIEADMEIIRLAMQSLKLTGVSDGRLV
                     LSHDGLVQAIIDQDPHAQARADEIVALLRDKDLPGLGELRHGTQPISESVVQALELLP
                     RLYGGAEVLDRASSLAAFDGVASALESLRTLVSKLADENVSLDLADVGAYGYHSGVTF
                     SMYSPGWHDALVRGGRYDNVSQAFGRARAATGFSMDLIRLARSVAQAQPTQAILAPAE
                     GANDKALKQTVADLRANGEIVVQLLPGEAARHDEFVFNRQLVNLDDQWVVQSLPANSI
                     S"
     gene            5215..6510
                     /locus_tag="VIC30_02590"
     CDS             5215..6510
                     /locus_tag="VIC30_02590"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEY7803310.1"
                     /translation="MNKNVVVIGTQWGDEGKGKIVDWLAESAQGVVRFQGGHNAGHTL
                     WIKGQKTILRLIPSGIMHPDITCYIGNGVVLSPEALFKEIEELEAAGIEVRQRLRIAP
                     ACPLILPYHIALDQAREAKRGDAKIGTTGRGIGPTYEDKVARRALRVQDLYDSAAFRT
                     KLEEVLDLHNFTLTQYLGAPAVSVDEVFDQAMGYAPALQPMVADVSELLNKAQKAGHH
                     LLFEGAQGALLDIDHGTYPFVTSSNCLSGAAAAGAGVGPQSLHHVLGITKAYTTRVGS
                     GPFPTELDNETGAHLAAVGKEFGSVTGRARRCGWFDGAALKRSVQINGISGLCITKLD
                     VLDGLPTIQLGVGYRIDGQFTELLPFGAADVARAEPVFEELPGWEGSTVGVTEFDKLP
                     ANARQYLMRISEVCEVPIDMVSTGPDRDETILLRHPFKS"
     gene            6566..7102
                     /locus_tag="VIC30_02595"
     CDS             6566..7102
                     /locus_tag="VIC30_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEY7803311.1"
                     /translation="MANPPNTARDVWYSWDEYNRLIEDLAVQIHDSGWAYDQIICLAR
                     GGMRVGDVLSRLNRIPLAILSASSYRENAGREQGQLDIAPYISMAYGSPSGRVLLVDD
                     MVDTGLTFGKVRGHLLSSYPAIKELRTAVVWWKAHSVVSPDYHSVYLEDNPWIHQPFE
                     AYDTLTLEELKKTHRGDK"
     gene            7239..7451
                     /gene="rpsU"
                     /locus_tag="VIC30_02600"
     CDS             7239..7451
                     /gene="rpsU"
                     /locus_tag="VIC30_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEY7803312.1"
                     /translation="MPTVRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAE
                     RKRKAAAAVKRHYKRIRSQQLPPRMY"
     gene            7527..9428
                     /gene="dnaG"
                     /locus_tag="VIC30_02605"
     CDS             7527..9428
                     /gene="dnaG"
                     /locus_tag="VIC30_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEY7803313.1"
                     /translation="MIPDTFVQELLSRVDVVDVVGRYVQLRKGGANLLGLCPFHQEKS
                     PSFTVSPTKQFYHCFGCGQHGSAITFLMQHTGASFPEAVRSLAATVGMQVPETQTSPA
                     TRARAAERRQEQSAHASVLDKAQTFYKAQLRDHAPAVEYLKARGLTGQIAAQYGLGWA
                     PETRQGLASVYARYEDPLLVESGLVIESDDGRRYDRFRGRVMFPIRNLKGELIGFGGR
                     IIGKGEPKYLNSPETPVFNKGQELYGAWEARQAIRREDQVIVVEGYMDVVGLAQLGVD
                     NAVATLGTATTADHLRKLIRLTHRIVFSFDGDGAGRKAAWRALQNTLPLLRDDLSVRF
                     LFLPSGHDPDTYIREFGQAAFKACIKDAVALSTFLLDELAERHRLDEPEGRSACVHEA
                     IPILAEMPEGALRAQVLNEFAQRVRLTREELDGLMLNHPSMAKRQPVSGASEGPGAGS
                     SLGLGSGANSGRSGMTTSRSARGRDAFDEPQDAWQPAPSRRRAVAPLAKRLLALLLAH
                     PTLAEQMGEQQLEVLEGDDNLVLVKEFVLLVQATGARHVGALIEVADPDSDLAGVLTG
                     LSGELMAQMDLPEPQAEWEDAMGRIELDRFKREQAALVAQGLIDEHAVKRYQELSARI
                     AGLTRRKEM"
     gene            complement(9987..10292)
                     /locus_tag="VIC30_02610"
     CDS             complement(9987..10292)
                     /locus_tag="VIC30_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803314.1"
                     /translation="MSFSALADLAALVAAGLFADLVAGALAAGLAATLVTALVALVAA
                     AFLAGVFAAVLLAGLVVFVFEGDTDFMLSFLVDAVALVAADLETAFLATGLLVLTLA"
     gene            10186..>10715
                     /locus_tag="VIC30_02615"
     CDS             10186..>10715
                     /locus_tag="VIC30_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor region1.1
                     domain-containing protein"
                     /protein_id="HEY7803315.1"
                     /translation="MTKVAANPAAKAPATKSANKPAATKAAKSAKAEKDTAVVRKTRA
                     KAAAAETASDDVEAAVAAKPKSKAKSKIPSGRRPGRPSKNPTQSDAFDDDNDGANAEV
                     IPEIKPVKRGKRGKGDARDLIAKGPMTPEEYEARRNRLKQLIKLGKDRGYLTYGEIND
                     HLPDDLVDAEAIDGII"
BASE COUNT         2418 a         2782 c         3096 g         2419 t
ORIGIN      
        1 ttagctggct ggttacgtga gcgcgccatt ttggtgcgtc acttcaaacg acccagagtc
       61 gatcaattta tccgcatcac ggtgggaact tctgagcaat gtgccagtct gattagtgca
      121 ttgagggcct gcgtttgccc ctaggggctt cgctagtcaa ttgtcagaaa agtctgtaga
      181 gtagcggcat ctgacagtcg atgttaagtt ggtcgcaggt ggtattccat tgatggccgc
      241 cccaattcaa aaacgattaa aaatttggag ttaatcaatg agcaacaagg ggcaaaccct
      301 tcaagaccca tttttaaatg tcttgagaaa agagcatatt cccgtttcga tttacttggt
      361 caacggcatc aagctgcagg gccaagtcga atcattcgat caatatgtca ttttgctcag
      421 aaatacggtc acgcagatgg tctataagca cgccatttct acggtggtgc ctgccaaggc
      481 cgtttcctta tcagccgagg aaagcgctga gtaagatcgc cacacttttc tgggcagttc
      541 atcactgatg aaggcaatgg tcataggcgt tgaccttggc tcgcctgatt acgttgcaaa
      601 ccgtcaagag tttgacatgc tcgccactag cgcgggcgct gagctcgtgg gcgagataac
      661 agctaagcgt gatcggccgg atgcggcaac gtttatcggt tctggcaaag tccaggaagc
      721 ggtcgacttg tgtcaggcct gcgaagctga cgtggtgttg tttgaccagc cgctgtcgcc
      781 ggcgcagcag cgaaaccttg agcgcaagct caattgccgg gtggttgacc gggttgccct
      841 gattcttgat atctttgcac tgcgtgctaa gagccacgaa ggtaagctgc aagtcgaact
      901 tgctcaatta cagcatttgg ccacgcgcct gacacggctt tggacgcact tggagcgcca
      961 gcgtggtggt atcggcatgc gcgggcctgg cgagtcccag ctcgaaatgg accggcgcat
     1021 gattggctcg aaggtcaagg ttctgcgcga gcgtctacaa aaggtgcagc gccagcgcgt
     1081 cacacagcgt cgcgcgcgtg cgcgcggagc ggcgctgtcc gtatctctgg tgggctacac
     1141 caacgccggt aagtcaacct tatttaacgc attgactcgg gccgatgctt atgcggcgga
     1201 tcagctattt gccactcttg acaccaccac caggcgctta tggatcgatg aggcagggtc
     1261 agtcaccttg tctgataccg tcggttttat ccgtgaattg ccgcacaccc tgatcgctgc
     1321 atttcgcgct accttggaag aagcgattca tgccgatttg ctgttgcacg tagtggatgc
     1381 gtcaagcgag cagcgcgacg atcaaatcca tgaggtacaa aaggttttag cggaaatcgg
     1441 cgcagctgac gttccgcaac tcttaatcta taacaagata gataaccttg gaatctctcc
     1501 aagaattgag cgagagaccc atggtaccat tcacaaagtt tttatcagtg cacaacgccg
     1561 cgagggttta tccctagtgc gtcaagcgat cgctgaattt gcaacgtgtg caggaaacca
     1621 tgcgacgaat gaccaaactt ctgaatttga atgacccagg ctggggccgt ggcaatgcca
     1681 acgaccctca aaagcccgag cccacgcgcc aagagccgcc gcgtcgacct aacaatcaag
     1741 acggcccacc cgatcttgat caggtttggc gggactttaa ccgcaagctc aaaggcttgt
     1801 tcggcaacaa aggtggtggc ccacgtcgcc cgtggccacc gcaaccacca gagtctggcg
     1861 gttccggctc aggcggtccc acgccgcgtc aaaccaagtt tggctttggt atcgtgggtg
     1921 ccgtggtggt gttgctttgg cttggcagtg gtttctttat cgttcaggaa ggtcaggttg
     1981 gtgtgatcac ccagttcggt gcttacaaaa gcacagctgc gccaggtttc cagtggcgca
     2041 tgccttaccc cattcagcaa actgagatgg tcgatgtctc ccaattgcgg acatttgaga
     2101 tcggttaccg aggcaacgca cgcaacaagg tgccgcctga ggcgttgatg ctgacgtccg
     2161 atgagaacat tgtggacgtg cagttcgtgg tgcaatatcg agttaaacct gatggtgcac
     2221 cggattatct gtttgaaacc cgcgatccgg atcagtctgt taatcaagtc gcgcaaagtt
     2281 cgatgcgcga agtggtgggt agaagcctga tggattttgt gttgtacgaa ggtcgtacgc
     2341 aggtcgcatc cgatgtgcaa cgcagcatgc aggaagtgct tgatcgctac aaaaccggca
     2401 ttctagttag cgcagtggcc attcagaacg tgcagccgcc cgagcaggtg caggctgcct
     2461 ttgatgatgc tgttaaagcc ggtcaagacc gcgagcgtca gattaacgag ggcgaagcct
     2521 accgtaacca ggtcgtgcca ctggctcaag gaacagcctc acgtatgctc gaacaagccg
     2581 aaggttacaa ggctaaggtc atcggtgatg cgcgaggtaa cacggcgcgt ttcctgagca
     2641 tcttggaaca gtacctggtt tcaccgaatg tgcagcgaga gcgtatgtat ttagacacca
     2701 tgcaagatat gtttgcgcgt tctagcaagg tgtttatcga tactgaagcc agcaacagca
     2761 tgctctattt gccgcttgac cgaatcatgc agcaaagtgc gcgtggtgca gccgggtcta
     2821 gctcgattgg catgtccgac ggcatgtcag gccaatccgg cagctcgtcg ggttctggct
     2881 caaacagcag cagcacaaac agcagctcga atacaagtaa cacaaacagt aaccagcgcc
     2941 cgtccttgcg tgaaacgttc tccggatcgt tctcgcggga ccggaacgct tcgcgctaag
     3001 gggtagaaca tgagtaacaa agttgtcgcg ctactcgttg ccctggctgt cgtggtcggg
     3061 attctttcaa cgtctgtttt tattgtgcgt gaacgtgatt tcgcgttggt gtttgcgctt
     3121 ggtgaagtgc gcagggtgat caaagagcct ggcctgtact tcaagttgcc accgccattt
     3181 caaaacatcg tcatgctcga taaacgtttg ttgacgattg agagtcaaga agccgaacgc
     3241 atccaaacgt ccgagaaaaa gaacctgctg atcgactcgt tcgtgaagtg gcgcattact
     3301 gatccacgcg tctactacat cacgtttgct ggtaacgagc gtgcggctga attgcgcttg
     3361 caagcccaaa ttcgtgatgc actaaacgcc tcggtcaaca tcagaactgt gcgcgatgtg
     3421 gttgcgcttg aacgtgatgt cattatggaa gaggtgcgtg acaacgttcg ccggcgcgcg
     3481 gcaccgttgg gtgtggacat tgttgatgta cgtctcaagc gcattgagtt tgcgcctgag
     3541 attgccgagt cagtgtaccg acgtatggaa tccgagcgtc ttcgagtcgc caacgaattg
     3601 cgatcaattg gtgcggctga aggtgagaag attcgcgctg gcgccgatcg tgaacgcgaa
     3661 gtgattgtgg ctgaagcgtt tgccaaggcg caggccacca tgggtgaagg cgatgccgaa
     3721 gcggctaaac tctatggtca ggcctacggt caggatgaag acttctacag tttttacaag
     3781 agccttgaag cctatcgtgc agcctttggt aagtctagcg atgtgcttgt ggtcgatccg
     3841 tcttcggact tcttccgttt catgaaatcg ccatcgggta acccgccatc gggtaatcca
     3901 gccccgagta actaagggcc atcgacgcac ggtataatgc cgtgcaagcc tagtgataga
     3961 acagtgaagt ggcggcttgt tgggttcgcg ccccaagccg cttttctttt ggggttggac
     4021 ttagatgatg aatggcaatt ggctgttgcc tgattacctc gcggatattt tgccggcgca
     4081 agctcggcag atagaggact tgcgtcgcaa gttgcttgac ctgtttcgca gctttggctt
     4141 tgaaaccgtc tcgccaccga tgctggaata catcgagtcg ttactgacgg gctcgggcaa
     4201 agatctgagc cttaagacat tcaagcttgt cgatcagctc tctggccgta ccttgggttt
     4261 gcgtgctgat atgacgccac agatcacacg cattgatgcg cacttgttaa accgcccagg
     4321 cgtgacacga ttgtgttact gcgggccggt gttgcatgcg cgtcctgcag gcttggtctc
     4381 cagccgcgag cagctgcaaa ttggtgctga aatctatggc tatgccggca ttgaagccga
     4441 catggaaatc attcgtctgg ctatgcagag tttgaagctc actggcgtga gcgatgggcg
     4501 tctggtgctc tcgcatgacg gactggtgca agccatcatt gatcaagacc cgcatgccca
     4561 ggctcgcgcc gatgagattg tggctttgct cagagataaa gacttaccgg gtttgggcga
     4621 actacgccat ggcacacagc ccatcagcga gtcggtggtt caggccctcg agctgctgcc
     4681 ccgtttgtat ggcggcgctg aagtgcttga tcgcgccagc agcctggcgg cattcgatgg
     4741 ggttgccagt gcgcttgagt cattgcgcac cttggtttcc aagctggccg atgaaaacgt
     4801 gagcctggat ctggccgatg ttggtgccta cggttatcac tccggtgtta cgttttccat
     4861 gtactcgcca ggctggcatg atgcgctggt gcgcggtggt cgctatgaca atgtcagtca
     4921 ggcatttggt cgagcgcgcg cggccacggg gtttagcatg gacctcatac gcttggcccg
     4981 ctcggttgcg caggcgcaac cgacacaggc gattctggca ccagcagaag gtgccaacga
     5041 taaggcgctc aagcagacag tggctgattt gcgcgcaaat ggtgaaatcg tggtgcaatt
     5101 gctgcctggt gaggcggcgc gtcacgatga gtttgtcttt aatcggcaac ttgtgaatct
     5161 cgacgatcaa tgggtggtgc aatcgctacc cgctaattcc atttcttaaa catcatgaac
     5221 aaaaacgttg tagtcattgg cacccagtgg ggtgatgaag gcaagggcaa gattgttgac
     5281 tggctagctg agtccgcgca aggtgtggtt cggttccaag gtggtcacaa tgccgggcac
     5341 acactgtgga tcaaaggcca aaaaaccatt ttacggttga ttccctcggg catcatgcac
     5401 ccggacatta cttgttacat tggcaacggc gtggtgctct cgcctgaggc gttgttcaaa
     5461 gagatcgaag agcttgaggc tgcaggcatt gaagtcaggc agcgattgcg cattgcaccg
     5521 gcctgtcccc taatcttgcc gtatcacatt gctttggacc aggcgcgcga agccaagcgc
     5581 ggtgatgcaa aaatcgggac caccggccgt ggcattggac ctacttatga ggacaaggtc
     5641 gcccgccgtg cgttgcgtgt gcaggacttg tatgacagtg ctgcgtttcg caccaagctc
     5701 gaagaggtgc ttgatttgca caacttcacg cttacccagt acttgggtgc gcctgcggtg
     5761 tcggttgatg aggtgtttga ccaagccatg ggctacgcgc cggctttgca gccaatggtc
     5821 gctgatgtca gtgagttgtt aaacaaggca caaaaagccg gtcatcacct gttgtttgaa
     5881 ggtgcccagg gtgctttgct cgatattgac cacggcactt acccgtttgt gacgagcagc
     5941 aattgcctct ctggtgctgc ggcagcaggt gctggtgttg gcccacaaag cttgcatcac
     6001 gtgcttggta tcaccaaggc ctacaccaca cgcgtcggat cgggtccgtt tcccaccgaa
     6061 ctagataatg aaaccggggc gcatttggcc gcggttggca aggagttcgg ttcggtgact
     6121 gggcgtgccc gtcgctgtgg ctggtttgat ggtgcggcgc ttaaacgctc ggtgcaaatc
     6181 aatggcatat ccgggctgtg catcaccaag cttgatgtgc tggatggttt gcccaccata
     6241 cagttgggcg tgggctatcg aattgacgga cagttcactg agctgttgcc atttggtgcg
     6301 gctgacgtgg cacgtgcaga gcccgtgttt gaggaactgc caggctggga aggctctacc
     6361 gtgggtgtga ccgagtttga taaactgcca gctaatgcac gtcaatactt gatgcgaatc
     6421 tctgaagttt gcgaagtgcc gattgacatg gtgtcgactg gccctgatcg tgatgagacc
     6481 atcttgctgc gccacccctt taaatcctga tattgaatcc tggcattcaa tcccgacatt
     6541 cagtcctgaa atcgagctgt tgacgatggc aaatcctcca aacaccgccc gcgacgtctg
     6601 gtatagctgg gacgaataca accgtttgat cgaagatctg gcggtgcaga ttcacgactc
     6661 cggctgggcg tatgatcaaa tcatctgtct ggcgcgcggt ggtatgcgcg tgggcgatgt
     6721 gctgtcacga ctgaaccgga ttccactggc gatcctatcg gcgagcagtt accgcgagaa
     6781 tgccggtcgc gaacaaggcc agctcgatat cgcaccctac atatcaatgg cctatggcag
     6841 cccatcgggt cgcgtgttgc tcgtggacga catggtcgac actggcctga cctttggtaa
     6901 ggttcgtggc catttgctgt cgtcttatcc cgcaatcaaa gaattacgca cggccgtggt
     6961 gtggtggaaa gcccattcgg ttgtgagccc tgactatcac agcgtttatc tcgaagataa
     7021 cccctggatt caccagccgt tcgaggctta tgacactttg acgcttgaag agctcaaaaa
     7081 gacacaccgg ggcgacaagt aagataagct tagtatttgg ctagtgtcac acaacaagcg
     7141 cttttgtttg cccaacattt gcgacgacgc actcaagctt gccttcgctg tgctatattt
     7201 acgggcttag tgcaatcttc tgaatacgaa aaactcttat gccaactgtc cgcctgaaag
     7261 aaaacgagcc gttcgaagtc gcgatgcgtc gctttaagcg caccatcgag aagactggtc
     7321 tcttgaccga gctgcgtgct cgtgagttct atgaaaagcc tactgctgag cgcaagcgca
     7381 aggctgctgc cgctgttaaa cgtcactaca agcgtatccg tagccagcaa ctgcccccac
     7441 gcatgtattg atcgcgggtg caagcggtcg cgcttggctt tacgtctgat ttgatttacg
     7501 tttagcgtca ttagttcgcg tctgccttga tccctgatac cttcgtccaa gagttgttgt
     7561 cccgcgtcga cgtggtcgac gtggttggac gctacgtaca gcttcgaaag ggcggcgcca
     7621 acttgcttgg gctttgccct ttccatcaag aaaagtctcc gtcctttact gtcagtccca
     7681 ccaaacagtt ctatcactgt tttggttgtg gccagcacgg cagcgccatc acgtttttaa
     7741 tgcagcacac cggtgccagc ttcccggaag cggtgcgctc tttggcggcg accgtgggca
     7801 tgcaagtccc tgagacgcaa accagtcctg ccacccgtgc gcgagccgcc gagcgccgtc
     7861 aggagcagtc agcgcacgcc agtgtgctgg acaaagcaca aaccttctac aaagcccagt
     7921 tgcgtgacca tgcgcctgcc gttgagtatt tgaaagcccg ggggctgacc ggtcagatcg
     7981 cagcacagta tggcttgggc tgggcgcctg agacgcgtca ggggttggcc agtgtctatg
     8041 cccgctatga ggacccgcta ctcgtagagt cggggctggt gatcgagtca gatgatggcc
     8101 gccgttacga tcgattccgt ggtcgggtga tgttcccgat tcgcaatctc aagggcgagt
     8161 tgattggatt tggcgggcgc atcatcggta aaggtgaacc caagtatctc aattcaccag
     8221 agacaccggt ttttaacaaa ggccaagaac tctatggtgc atgggaagca cgccaagcca
     8281 tccggcgcga agaccaggtc attgtggtcg agggttacat ggacgtggtg ggcttggccc
     8341 agcttggcgt ggacaatgcc gtggccacgc ttggtacggc cacaacggct gatcatttgc
     8401 gcaagctgat acgcctgacg caccggattg tgtttagttt tgatggggac ggggcgggtc
     8461 gaaaggctgc ctggcgtgcc ttgcaaaaca ccttgccctt gttgcgtgat gatctgtcgg
     8521 tgcggttttt gtttttaccg tcaggtcatg acccggatac gtatattcgc gagtttggtc
     8581 aggcggcgtt taaggcttgc attaaagacg cggtggcctt gtcaacgttt ttgcttgatg
     8641 agctcgctga gcgccaccgc ttagatgagc ctgaggggcg ttcggcttgt gtgcatgaag
     8701 ccatcccgat cttagctgag atgcccgaag gggctttgcg tgcgcaagtc ctaaatgagt
     8761 ttgcccaacg cgtgcggcta actcgagaag agctcgacgg cctcatgctg aatcacccat
     8821 cgatggccaa gcgccagccc gtgtcgggcg cctcagaagg cccgggtgcc gggtcgagct
     8881 tgggattagg gtcaggcgca aactctgggc gatcgggcat gacaacgtct cggtcggcac
     8941 gcgggcgtga cgcatttgat gaaccacaag acgcttggca acccgcaccg agccggcgcc
     9001 gggctgtggc acccttggct aagcggttac tggcgctttt attagctcac cccactttgg
     9061 ctgagcagat gggcgagcag cagcttgagg tcttagaagg tgatgacaac ctagtgctgg
     9121 tcaaggagtt tgtgctgctg gtgcaggcaa ctggggcacg ccacgtcggc gccctgatcg
     9181 aggtggctga tccagacagc gacttggcag gggtcttaac agggctttca ggcgaattga
     9241 tggcgcaaat ggatttgcct gagccgcagg ccgagtggga agatgccatg ggtcggattg
     9301 aattagaccg cttcaagcgc gagcaggccg cgctcgtggc acaaggactc atcgatgagc
     9361 acgcggttaa acgctatcag gaactcagtg ctcgtattgc tggtctaacg agaagaaaag
     9421 aaatgtaagc aagcccgaca tgcttggaag ctaagttttg tttgcgtatt gtaggatcga
     9481 ttaaagggtc ggccgttagt ctgcctccgg gttggcttta gcggcgcgag cctacagtta
     9541 caggtacaat atccaattgc ttcacgattg cacacacaac tgccttggca tcagccgcta
     9601 aattgacggc ttcaaaccgc caggcactat tggacgaatg tcccgtgaat cgtttcaagc
     9661 aagcaaactt ggcaatacct aagtgacggc aaacaaaaac gacagtcaag cgactgacgt
     9721 gggtgttgtt gtcgctgcga aaacagtgtt gggcaaagcc cgactcgagt gccgccggcg
     9781 gtatggtggc aacagatacg tatcacctga ttcaaacacg ggaacatgat gacgacacgc
     9841 cgccagacaa aaacaaccgc caaagcaact gctaaaacaa ccgctaagac agccgttaaa
     9901 gtgacaggca aacagcccgc tcaggctacc aagactacta aggttactaa gaccaccaag
     9961 gctagcgcgg ctactagcgc caagtctcag gctagcgtca agacgagtaa gcctgtagct
    10021 aaaaaagccg tttccaaatc agccgccacc aaggcgacag cgtcaaccaa gaaggacagc
    10081 atgaagtcgg tatcaccctc aaaaacgaac accaccaagc cagcgagcaa gacggccgca
    10141 aaaacgcccg ccaagaaagc cgctgcaacc aaagctacta aggctgtgac caaggtcgcg
    10201 gccaaccctg cagctaaagc gccggcgact aagtcagcaa acaagccggc tgcaaccaaa
    10261 gccgctaaat cagccaaagc agaaaaagac accgcagtgg tgcgtaagac gcgcgccaaa
    10321 gcagcagcag ccgagacagc gagcgacgat gtcgaagccg cagttgctgc caagcccaaa
    10381 tccaaagcca agagcaagat accaagtggg cgccgcccgg gccgtccgtc caagaacccg
    10441 acccaaagtg atgcgtttga tgatgacaac gacggtgcca acgccgaagt tattcctgaa
    10501 atcaaaccag tcaaacgtgg taaacgcggt aagggcgacg cgcgcgacct gatcgccaaa
    10561 gggccgatga caccggaaga atatgaggct cgtcgtaatc gtctgaagca gctcatcaaa
    10621 ctaggtaaag accgtggtta cttgacctat ggtgagatca acgatcattt gcctgacgat
    10681 ctggttgatg ccgaagccat cgatggcatc atcaa
//
LOCUS       DATBNL010000151         1981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_21847, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000151 DATBNL010000000
VERSION     DATBNL010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21847"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /gene="minC"
                     /locus_tag="VIC30_02620"
     CDS             <1..415
                     /gene="minC"
                     /locus_tag="VIC30_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEY7803316.1"
                     /translation="PVVQAATQTPIEPVAETAATPPAASGSPTLVIEGPLRSGQRVYA
                     RDADLIVMGVVSQGAEVIADGNIHVYGPLRGKAMAGARGDAQARIFTTRLDAELVAVA
                     GVYRVIDATLPANLHRKPAMVFLKDQALRLEPLGD"
     gene            576..1391
                     /gene="minD"
                     /locus_tag="VIC30_02625"
     CDS             576..1391
                     /gene="minD"
                     /locus_tag="VIC30_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEY7803317.1"
                     /translation="MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGFKTAVIDFDVGLR
                     NLDLIMGCERRVVYDFVNVIQGEASLNQALIKDKNLENLFILPASQTRDKDALSQEGV
                     EKVINDLKDMGFDYIVCDSPAGIETGALLAAYFADDAIVVTNPEVSSVRDSDRILGIL
                     ASKSKRAVEGLEPVQEFLLLTRYNPKRVNDGEMLSLKDIEDILRIKLIGVVPESETVL
                     QASNQGLPAIHIKGADAAEAYTDIVARYLGEEKPLRFVEYTKPGLIKRLLGGK"
     gene            1391..1654
                     /gene="minE"
                     /locus_tag="VIC30_02630"
     CDS             1391..1654
                     /gene="minE"
                     /locus_tag="VIC30_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006226437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEY7803318.1"
                     /translation="MSFLSFLLGQKKTSASVAKERLQIILAHERTGGGADTPDYLPQL
                     QQELVAVISKYVKVDPNDIKVNLERQDSLEVLEVKIEIQQDQP"
BASE COUNT          488 a          519 c          518 g          456 t
ORIGIN      
        1 acccgtggtt caagcagcaa cccaaacacc aattgaacca gtggctgaaa cagcggcaac
       61 accaccagct gccagcggct cacccacgct ggttattgaa ggacccttac gctcgggtca
      121 gcgcgtctac gcacgcgatg ccgatctcat tgtgatgggc gtggttagcc aaggcgctga
      181 ggtgattgcc gatggcaaca tccacgtcta tggtccgttg cgtggcaagg ccatggccgg
      241 tgcccgcggt gatgcacaag cccgcatttt taccaccaga ctcgacgctg agctcgtggc
      301 cgtggccggt gtctaccggg tgattgacgc cacactgcca gcaaatctgc atcgaaagcc
      361 agccatggtg tttttaaagg atcaggcact gcgccttgag ccacttggcg attgaacggc
      421 tgcgatttcg ttcataatag agggtagtgc accgaatcag tcacaatgcg agacttaggc
      481 aatcgttcag gccaagcata cggatacggt agatcggtag aacagtaaag ctacaaacca
      541 ttatttttaa tttgacacgg aaggatttgc tcgccatgac acgaatcgta gtggtgactt
      601 caggcaaagg tggcgttggc aagaccacca ccagcgccag tttctcagca ggactggcca
      661 tgcgtggctt taagaccgca gtgattgact tcgacgttgg cctgcgtaac cttgatctga
      721 tcatgggttg cgagcgccgt gtggtctatg actttgtgaa tgtcattcag ggcgaagcct
      781 cgctgaatca ggcactgatc aaggataaga accttgagaa cctgtttatc ctgccagcct
      841 cccaaacccg tgacaaagat gccttgtcgc aagaaggtgt agaaaaagtc atcaatgacc
      901 taaaagacat gggctttgac tatatcgtct gcgactcgcc tgccggtatt gaaaccggtg
      961 cgttgcttgc ggcctacttt gccgatgacg ccatcgtggt gaccaatccg gaagtctcat
     1021 cggtgcgtga ctcagatcgc attctcggca ttctggcttc taagtcaaag cgtgcagttg
     1081 aagggcttga gcccgtgcaa gagtttttat tgctcacgcg ctacaacccg aaacgcgtca
     1141 acgacggcga gatgctctct ttgaaagaca tcgaagacat cctacgcatc aagctcattg
     1201 gcgtcgtgcc agagtccgag acggtgttgc aagcatctaa ccaaggttta cctgcgatcc
     1261 acatcaaagg tgctgacgcc gctgaagcct ataccgacat cgtcgctcgt tacctcggcg
     1321 aagaaaaacc gttgcggttt gtggagtaca ccaaacccgg tttgatcaaa cgtttgctcg
     1381 gaggtaagtg atgtcgtttc tgtccttttt acttggccag aagaagacct cggcctcggt
     1441 agccaaagag cggctacaaa tcatcctggc acacgaacgc accggcggcg gtgcagacac
     1501 ccctgactac ctgccacagt tgcagcaaga actggtggcg gtgatttcca agtacgtcaa
     1561 agtcgatccc aacgacatca aggttaatct tgagcgtcag gactcacttg aggtgcttga
     1621 agtcaaaata gagatccagc aggatcagcc ttaagccagt ctcaaagcca atctcactaa
     1681 aaagccccgc gaggggcttt ttatttgtct gcgtgtttct ggtttggcaa cgctttgctg
     1741 cggggcttga attcgcccga gagaaccaaa ctcacattaa cgggaatttt aaacatggtg
     1801 ctttaaagtt ccgtttaaac attttataga accttgaacg cattgcccgc gcattcccct
     1861 tgctgaaccc gcagggttac tgtgaaagaa ccgattgtta gagcgagcac agccctagcc
     1921 atcgaaggct aataggatac ttcaactcgt tggaatcacg ccatgttggg cgagatgatt
     1981 c
//
LOCUS       DATBNL010000152         1623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_190852, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000152 DATBNL010000000
VERSION     DATBNL010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190852"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VIC30_02635"
     CDS             complement(<1..483)
                     /locus_tag="VIC30_02635"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEY7803319.1"
                     /translation="MTVIHGLIPAGGVGARALSAQSVNASTLSRAPTKPLPKQYRLVN
                     GVPMLVHAVNALLADSRVHDVVVGVQANDPFAHEYLVSLALVQVLPSAGATRAQTVLQ
                     TLQQSGFPDQDWVLVHDAARPGLPNDCLTALIDVCLQSNQGGLLAMPAADTVKLAREQ
                     S"
     gene            793..>1623
                     /locus_tag="VIC30_02640"
     CDS             793..>1623
                     /locus_tag="VIC30_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009456667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEY7803320.1"
                     /translation="MTLLAQSDTQTLLASLKPGQRLAHPLPPGSGDAWLLSQLAQQAN
                     EPMVILTAAPQQAQRLASEISLIAPNLRVRMLPDWETLPYDAFSPHEDLVSERLRTLH
                     ALTQGEVDVLTVPITTAQYRVCPPSFLAAYTFAFKQKDRLKEAALREQLVLANYNHVT
                     QVSAPGEFCIRGGLIDLFPMGSVLPYRIDLFDDEIESIKTFDVDTQRSLYPVPQVQLL
                     PGREFPMDEAARNHFRAAFREVFEGDPSRALPYRDIGNGIPFAGVEYYLPLFFEETAT
                     L"
BASE COUNT          363 a          468 c          408 g          384 t
ORIGIN      
        1 gctctgttca cgggccaact tcaccgtgtc agctgctggc attgccaaca acccaccttg
       61 attagattgc aaacacacat cgatcaacgc agtcagacag tcgtttggca acccaggcct
      121 agccgcatca tgcacaagca cccagtcctg atcgggaaac cctgactgtt gcaatgtttg
      181 caataccgtc tgcgcgcgcg tagcaccagc actaggcaac acctgcacga gcgctaaaga
      241 aaccaaatac tcatgggcaa acggatcatt agcctgtacc ccgaccacca catcgtgcac
      301 ccgtgaatcc gccagtaatg cattaaccgc atgcaccagc atcggtacac cgttgaccaa
      361 gcgatattgc ttcggtagcg gtttggttgg cgccctcgac agtgttgatg cattgacaga
      421 ttgcgcacta agcgctcgtg caccgacacc accggctggg atgaggccat ggatcactgt
      481 cattgtgtga cccaacccat ggctacggtc gtcgccaacg taggtgcttg cacgtctaca
      541 aaagttgtct tcaaagtggt tggtcgcttg tttggtttgc ttgtttggtt tgcttgttta
      601 gttcgcgctc tattgcggcc gcactgaggt cgagcagtac ttaacgcagg cagcacttct
      661 cttaggaaac acccaattga ttctgatttt aaacgcctga tagcacttat tgccgagcaa
      721 cggctcgatt tgggcggcat tgcaccctag cctgctcaaa attttataat gtcggcttac
      781 acgagacgct taatgacact tctagcccaa tccgacactc aaaccttact tgccagccta
      841 aaacccgggc aacgcttagc acatccacta ccgcctggat caggtgacgc ctggctgttg
      901 tcacaactgg cccaacaggc caacgagccc atggtcattt tgacggcggc cccgcagcag
      961 gcgcagcgat tagccagtga aatcagcttg attgccccaa acttgcgggt tcgcatgctg
     1021 cccgattggg aaaccttgcc gtatgacgct ttctcgccac acgaggatct ggtctcggag
     1081 cgtttgcgca cgctacatgc gctgactcaa ggtgaagtgg atgtgttgac agtacccatc
     1141 accaccgcgc agtaccgggt gtgtccacca agttttttgg cggcctatac gtttgccttc
     1201 aaacagaaag accggctgaa agaggcggct ttgcgcgaac agctcgtgct tgcaaactac
     1261 aaccatgtca cgcaagttag cgcaccgggt gagttctgta ttcgcggtgg gttgattgac
     1321 ctctttccca tggggtcggt gttgccctac cggattgact tattcgacga tgagatcgag
     1381 tccatcaaga catttgatgt cgacacacaa cgcagtctct accccgtccc gcaagtgcaa
     1441 ctgctacctg ggcgtgagtt cccgatggat gaagctgcac gcaatcactt cagggccgcg
     1501 ttccgcgaag tatttgaggg tgatccgtca cgcgcgctgc cctatcgcga tatcggcaat
     1561 ggcattccgt ttgctggcgt tgaatactat ctgcctttgt tctttgaaga aacggccacg
     1621 ctg
//
LOCUS       DATBNL010000153         2208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_51822, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000153 DATBNL010000000
VERSION     DATBNL010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51822"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /locus_tag="VIC30_02645"
     CDS             <1..1103
                     /locus_tag="VIC30_02645"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEY7803321.1"
                     /translation="IAWMLRNFLRRFDQLRRQQTPGVSAWLYGLMGRDAVLLNERLPA
                     DQVKRILVVRNNKRIGNMYFLLPFLNRLREAYPDASIDLMVLSGSHARIFQAMSLNRI
                     WVSHFAFATALTCFKTLRQCRQEPYDLLFMPHPSSTDLLIGRYIRARNKISFASPRVN
                     AVYPQSIDAPHASAHAAKTPLALIDSANLQDKPVNHLMTLTEQERETAEQQVKELRSD
                     ATSAASTVYTVAYFRGARGKKVIANTDWLRIREQFDQASTAPIVWIEILSPDVTEPLV
                     PATATWQSKDFRALGAFLNACDLFICGDTGPLHLADAAGARCVGLFTATTPEHYGCMG
                     EHCINVTDLSALNPSHILQGLDATRASLPQQP"
     gene            1128..>2208
                     /locus_tag="VIC30_02650"
     CDS             1128..>2208
                     /locus_tag="VIC30_02650"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803322.1"
                     /translation="MKVFYGWKMAFAAGGLQIIQAMMLHQAFGAYVAVLTIEMGWSKT
                     ALSGASAMLSMEAALLGPLIGWFLDRFGAKGVIKIGVLMFGLGFIAMSQIDSLPGFYV
                     SVAVIAVGASMAGYFPLNVAVIQWFEKKRARALSIVGLGFALGGVFVPIVAAAIEWFG
                     WRSTAMGSGIAAIVLGYPLASMFRRRPEDFGEVVDGIDSQTKAQANNANSNRPTEPEP
                     DFTAKQAFKTRAFWLLAAGHGIALIVVMAVNTHAINHMRISLGYSISQASVYIMLMTG
                     FQVLGVLLGGYLGDKFEKRLVAAGCMLLHASGLFVLTYATEVYELVYFAVAHGLAWGL
                     RGPFMQAIRADYFGRRAIGMILGVSA"
BASE COUNT          458 a          605 c          604 g          541 t
ORIGIN      
        1 cgatagcctg gatgctcaga aactttctgc gtcgatttga tcaactccgt cgtcaacaga
       61 cgccgggcgt gagcgcgtgg ctgtatggct tgatgggtcg cgacgcggtt ttgttaaacg
      121 aacgtctacc tgcggatcag gtcaagcgta ttttggtggt gcgcaacaac aaacgcatcg
      181 gcaacatgta tttcttattg ccttttttga atcggcttag agaagcctac ccagatgcca
      241 gcatcgattt gatggtgctc tctggctcac acgctcgcat atttcaagcg atgtcactga
      301 accgtatctg ggtgtcacac tttgcgtttg ccacggcact gacttgcttt aaaacgctac
      361 gccaatgtcg gcaagaaccc tacgatctgc tgttcatgcc acatccgtca tcaacggatc
      421 tgctaattgg tcgctacatt cgagcgcgca acaagattag ctttgcgagt ccacgggtta
      481 atgccgtcta ccctcaatcc atcgatgccc cgcatgccag cgcacatgcc gccaaaacac
      541 cactggcgtt aattgattcg gcaaacttgc aagacaaacc cgtcaatcac ctgatgacgc
      601 ttaccgagca ggagcgcgag acggccgaac aacaagtcaa ggagttacgt agcgatgcaa
      661 catcagccgc atcaaccgtc tacaccgtgg cgtattttcg gggagcacgc ggtaaaaaag
      721 tcatcgccaa caccgactgg ttgcgaattc gcgagcagtt tgatcaggct agtactgcgc
      781 ccatcgtctg gattgaaatc ctcagtcccg acgtcaccga accgttagtg cctgctacag
      841 caacctggca gtcgaaagac tttcgtgcac tgggcgcctt tctcaatgcc tgtgacctgt
      901 ttatctgcgg tgacaccggt ccattgcatc tggctgatgc cgccggcgct cgctgcgtgg
      961 ggttgtttac cgccacgaca ccggaacact atgggtgcat gggcgaacat tgcatcaacg
     1021 tcacagacct atctgcccta aacccgagcc acatcctgca gggactcgac gccacgcgtg
     1081 cgagcctgcc gcagcagcca tgaaggtgcg gccatgaagg ttcggtcatg aaagtgtttt
     1141 acggctggaa gatggccttt gctgccggcg ggctgcagat cattcaggcg atgatgctgc
     1201 accaggcctt tggcgcttac gtggcagtgc tcaccatcga aatgggctgg agtaagactg
     1261 cgctgtcagg cgcctcggcc atgctgtcaa tggaagccgc cctgctcggt ccactgattg
     1321 gttggtttct tgatcgtttt ggtgccaagg gtgtgatcaa gattggtgta ctcatgtttg
     1381 gtctcggttt catcgccatg agtcagatcg actcattacc gggcttttac gtgagcgtcg
     1441 ctgtcatcgc cgtgggtgct tcgatggcgg gctacttccc gcttaacgtg gcggtgattc
     1501 aatggttcga gaaaaaacgc gcacgtgccc tatcaatcgt tggtctgggc ttcgcacttg
     1561 gtggcgtgtt tgtacccatt gtggcagcag ccatcgaatg gtttggctgg cgcagcaccg
     1621 ccatgggcag tggcattgcc gcgattgtgc ttgggtatcc attggcaagc atgttccgtc
     1681 gtcggcctga agattttggc gaagtggttg atggcatcga cagtcaaacc aaagcacaag
     1741 ccaacaatgc aaacagcaac aggcctactg agcctgaacc tgatttcacc gccaaacaag
     1801 cctttaaaac ccgggcgttc tggttattgg ctgccggcca cggcattgca ctgattgtgg
     1861 tcatggctgt taacacccat gccatcaatc acatgcgcat ttcgctaggc tattcgatct
     1921 cgcaagcttc tgtgtacatc atgcttatga cgggctttca ggtgctcggc gttttactgg
     1981 gcggttatct tggcgataag tttgaaaaac gcttagttgc agccggctgc atgttgctgc
     2041 atgccagcgg attatttgtc ctgacctacg ccaccgaggt ctacgagctc gtgtattttg
     2101 cagttgcaca tgggctggcc tgggggttgc gcggaccgtt catgcaagcc atacgcgccg
     2161 actacttcgg gcgccgtgcc atcggcatga ttctgggcgt ctcggcca
//
LOCUS       DATBNL010000154         2627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_31795, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000154 DATBNL010000000
VERSION     DATBNL010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31795"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1525)
                     /locus_tag="VIC30_02655"
     CDS             complement(<1..1525)
                     /locus_tag="VIC30_02655"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY7803323.1"
                     /translation="MKLPLFPWLKDTRVTGDTLTGDLSAAVVVTLMLIPQSLAYALLA
                     GMPAHVGLYASVLPLIGYALLGRSPALAVGPVAIASVMTFDALLPFFTPGSPEWVAGG
                     MFLALASGLILLVFGFLRFGFIAALLSHPVMSGFVSGAAILIILGQFKTMTGIEVSGG
                     TAMQQLHQLAINLDRVNMITLIVGLSTFILLLLARRFAGKLFKSAGVRGLLLDILTKS
                     SPLVMIAVVTLVLVFSGFDGDTATVGAVPTGLPLIALPPMSSAYTGLVISALLIGVVG
                     FIESVSMARAIGRIRDVPTDADAELRGLGAANMLSGLSGAFPVTGGLSRSVVNLDAGA
                     RTPLAGVFSAILMVGVLLGAGQYLAALPLASLAALIIVAIWALFDWQTLRDCIRYDRA
                     DAGGWLVTFFGVLSLGVEHGIMLGIALSVGTVLWRQSRPHIAVMGRLPGTEHFRNVNR
                     HEVQTLPNALFLRVDANLFFANWDRVRDFIDQQTQPLQTDGHVVLSMTSVSDIDTTAV
                     "
     gene            complement(1964..2380)
                     /gene="tnpA"
                     /locus_tag="VIC30_02660"
     CDS             complement(1964..2380)
                     /gene="tnpA"
                     /locus_tag="VIC30_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011056255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEY7803324.1"
                     /translation="MFKAHKGRHSVYSLTAHLVFVCKRRGQVFNDERLVFLRDVFDKV
                     LDDFESELLEFNGQDDHVHLLISYPPKHSISAMVNSLKGVSSRRLKEQFPEIESFWSV
                     AKSKNSLWSPSYFASSTGGAPIEALKRYIQEQNQPD"
BASE COUNT          710 a          706 c          675 g          536 t
ORIGIN      
        1 caacggcggt ggtgtcaatg tcagagacgc tggtcatgct cagaaccaca tgaccgtcgg
       61 tttgcagagg ctgggtttgc tgatcaatga agtcgcgcac tcgatcccag ttcgcaaaaa
      121 acaaattcgc atcaacacgc agaaatagtg cgttgggtaa ggtttgcacc tcgtggcggt
      181 tgacgttacg gaaatgctcg gtgccgggca agcgtcccat gacggcaatg tggggtcgcg
      241 actgacgcca caacacggtg cccactgata gggcaatgcc cagcataatg ccgtgttcaa
      301 cgcctaaaga cagcacccca aaaaatgtca cgagccagcc accggcgtca gcccggtcat
      361 agcggatgca gtcgcgcagt gtttgccagt caaacaaagc ccagatggct acgataatca
      421 gtgcagccag actagccaga ggcaaggcag ccaggtattg accggcgccc agcaacacgc
      481 ccaccatcaa gatcgctgag aacacgccag ctagcggcgt acgtgcgccg gcatctagat
      541 tgaccactga acgagacaat ccgccggtga cgggaaacgc accagacagg ccagagagca
      601 tgttggcggc acccaagccg cgcagttcgg catcggcgtc agtgggtaca tcacggattc
      661 ggccaatggc gcgcgccatg gagacacttt caatgaaacc gaccacgcca atgagcaaag
      721 ccgaaatgac cagccccgtg taagcggaac tcatgggggg tagtgcaatg agtggcagtc
      781 ccgtgggcac agcaccgacg gtggcggtat caccatcaaa tccactgaac actaaaacca
      841 atgtgaccac cgcgatcata acgagcgggc tcgacttggt caggatgtcg agcaacaggc
      901 cacgcacacc cgcggactta aatagcttgc ccgcaaaccg gcgggccagt aacaagagga
      961 tgaaagtcga taaacctacg atgagcgtga tcatgttcac acgatcgagg ttgatggcca
     1021 gctgatgtaa ctgctgcatt gccgtgccgc ccgagacttc aatacccgtc atggttttaa
     1081 attgacccag aatgatcagg atggcagcac cagagacaaa cccgctcatg acagggtgac
     1141 tcagtagcgc agcgataaaa ccaaaccgca agaagccaaa gaccaacaga atcagaccgg
     1201 atgccaatgc cagaaacatg ccaccagcga cccattcggg cgagcccggc gtaaaaaatg
     1261 gcaacaaggc atcaaatgtc atgaccgaag caatggccac aggtcccaca gcaagcgctg
     1321 ggctgcgacc cagcagggca tagccaatta gcggcaagac actggcgtat aaccccacgt
     1381 gcgcaggcat accagccaac aacgcatagg ccaggctttg cgggattagc atgagcgtca
     1441 cgaccacggc cgccgacaga tcgccggtca aggtgtcacc ggtcacgcgc gtgtctttga
     1501 gccagggaaa gaggggaagc ttcatgaacg tttagtcttc aatctcgtga tctcgtgcat
     1561 attgcgatca gcataacccg caatcactat atgaaatgct taattataaa gtggtagggg
     1621 tgggcgtatt tttatctaga tcaagcatta atcaaccacg agaactgatt tgttagcgct
     1681 tcgggtcgat gccggggctc gcggttatca agtcgtgttc aaaacctcgt tctttgaatc
     1741 gggatatgag acaacgggtc atgcctgtta gcgattttat taacgtcagg tcgatatgcc
     1801 cttagtcccg ataaagcccg atagcttcgc ctgtgactta tgcacctgtg gcttattctg
     1861 tgtcggatcc tgtgcttgat ccactgacag gcatcatggt cgcacactat aatgaaacat
     1921 taaccaacac gctaagcccc gccgttcggg gcgaggacaa tcatcaatcc ggttggttct
     1981 gttcttgaat gtagcgcttg agtgcttcaa ttggagcccc gcctgtgctg ctagcgaagt
     2041 agcttgggct ccatagcgag ttttttgatt tggccacaga ccagaacgat tcaatttcag
     2101 ggaactgttc tttcaggcgc ctgctagata cccctttcaa actgttcacc atcgctgaaa
     2161 tgctgtgctt cggtgggtat gagatgagca ggtgaacatg atcgtcttga ccattgaact
     2221 cgagcaactc ggactcaaag tcatcaagca ctttgtcaaa cacgtctcgt aaaaagacca
     2281 gccgctcgtc attaaaaacc tggccacgac gtttgcacac aaacaccaag tgcgcggtta
     2341 gagaataaac cgagtgccgt cctttgtgtg ctttgaacat tgcagaccaa acccatagtg
     2401 tgaaataata tcaattatac cgtctacata gctacacaga ccaatctata taaaccagtt
     2461 tttagttaca ccgacttact gacttgactt gctgatttga cctattgact tgacctactg
     2521 acttcactga cgtgaccacc cacaccaaaa ccctcaggct acgaataaaa gacaagcatc
     2581 gggcttttct tgacgggttg gcacgtgaag tgaacatggt ctggaac
//
LOCUS       DATBNL010000155         1949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_141273, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000155 DATBNL010000000
VERSION     DATBNL010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141273"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1949)
                     /locus_tag="VIC30_02665"
     CDS             complement(<1..>1949)
                     /locus_tag="VIC30_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEY7803325.1"
                     /translation="RIELPQVFFMRVAMGLALREIDRETRAIEFYEILSSFDFMSSTP
                     TLFNSGTLHSQLSSCYLTTVADDLDGIYEAIKENALLAKYAGGLGNDWTPVRAMRSHI
                     KGTNGESQGVVPFLKVVNDTAVAVNQGGKRKGAVCCYLETWHLDIEEFLELRKNTGDE
                     RRRTHDMNSANWIPDLFMKRVMEAGDWTLFSPSDCPDLHDKFGADFEKAYVAYEEKAA
                     RGELTLFKKMPALNLWRRILSMLFETGHPWITFKDPCNVRSPQQHAGVVHSSNLCTEI
                     TLNTNDSEIAVCNLGSINLVAHLKDNGQGGHELDHDKLQKTIKTAMRMLDNVIDINYY
                     AVDKARNSNLRHRPVGMGIMGFQDCLHVMRVPYASQEAVEFSDRSMEAVCYYAYGASS
                     DLAAERGRYESYDGSLWSRGILPQDTLDLLREQRGGYVEVDQSSTMNWDSLRARIKQQ
                     GMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNNNLVRDLKKLG
                     LWDEVMVADLKYFDGSLSRIDRIPNELRTLYATAFEVDSSWVVECAARRQKWIDQAQS
                     LNIYIAGASGKKLDDTYKLAWLRGLKTTYYLRTLGATSAEKSTGHGGELNAVSNGSSS
                     NAPVSASTSAMPEPEVVGAACTMRP"
BASE COUNT          448 a          515 c          515 g          471 t
ORIGIN      
        1 tctggcctca tggtgcaagc agcccccacc acttcgggtt cgggcatggc gcttgtgctg
       61 gctgatacag gggcattgct gctgctgccg ttactaacgg cattgagctc gccaccgtgg
      121 ccagttgact tctcggcact ggtggcacca agcgtgcgca ggtagtaggt ggttttaaga
      181 ccacgcaacc aagctagctt gtaggtgtca tcgagtttct taccagaggc gccggcgatg
      241 tagatattta aagactgtgc ctgatcaatc cacttttggc ggcgtgccgc acactcaacg
      301 acccacgaag aatcaacttc gaaagcggtt gcgtaaagcg tacgcagctc attggggatg
      361 cgatcaatac gggacaggct gccgtcgaag tatttcaggt cagcgaccat gacttcgtcc
      421 cagaggccca gcttcttgag gtcacgcacg aggttgttgt taacaacggt gaactcgccg
      481 gagaggttcg atttgacgta caagttttga taagttggtt cgatgcacgc tgatacaccg
      541 atgatattgg aaattgtcgc ggttggggcg attgcaacgc aatttgagtt acgcataccc
      601 tgttgtttga tgcgtgcacg caacgaatcc caattcatcg tgcttgattg atccacttca
      661 acgtatccac cacgttgctc acgcaacaga tcaagtgtgt cttgcggcaa gatgccacgt
      721 gaccaaagtg aaccatcgta gctttcgtag cggccacgtt ctgcagccaa atcacttgat
      781 gcgccgtagg cgtaataaca aacggcttcc atcgaacgat cagaaaactc aaccgcttct
      841 tgtgatgcgt atggcacgcg catgacgtgc aggcaatcct gaaagcccat gatgcccatg
      901 ccgactggac gatgacgcag gtttgaattg cgtgccttgt caaccgcgta atagttaatg
      961 tcgataacgt tatcgagcat acgcatcgcc gtcttgatgg tcttttgcag tttgtcgtga
     1021 tcaagctcat gaccaccttg gccgttgtct tttaagtgcg ccaccaagtt gattgatcca
     1081 aggttgcaca cagcgatctc agagtcgttg gtgtttagcg tgatttcggt gcacagattc
     1141 gagctgtgta cgacaccagc gtgttgctga ggtgaacgca cgttgcaagg gtctttgaag
     1201 gtgatccatg gatggcctgt ttcaaacagc atcgacaaga tgcggcgcca cagattcaaa
     1261 gcaggcatct tcttgaacag ggtcagctca ccacgtgcgg ctttctcttc gtaggccaca
     1321 taggctttct caaagtcagc gccaaacttg tcgtgcaagt cagggcagtc ggacggcgag
     1381 aacagtgtcc agtcacccgc ttccatgacg cgcttcatga acaggtctgg aatccagttg
     1441 gcgctattca tgtcgtgggt gcgacgacgc tcatcaccgg tgttcttgcg cagttccaga
     1501 aactcttcga tgtcgaggtg ccacgtctca agatagcaac ataccgcccc tttgcgtttg
     1561 ccgccctggt tcacggccac ggccgtgtcg ttgaccactt tcagaaaagg caccacgccc
     1621 tggctttcgc cattggtacc tttgatgtgg ctgcgcatgg cacgtaccgg cgtccagtcg
     1681 ttacccaaac caccggcata cttggccaac agcgcatttt ctttgatcgc ttcgtaaatg
     1741 ccatcgagat catcagcgac tgtcgtcaga tagcaagaag aaagctgtga gtgcagggtg
     1801 cctgagttaa acaaggtcgg tgttgagctc atgaaatcaa agctcgacaa gatttcatag
     1861 aactcgatgg cacgtgtctc gcggtcaatc tcgcgcaaag ccagccccat ggctacacgc
     1921 ataaaaaaca cctgcggcaa ttcaatacg
//
LOCUS       DATBNL010000156         2191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_71568, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000156 DATBNL010000000
VERSION     DATBNL010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71568"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..1205
                     /locus_tag="VIC30_02670"
     CDS             96..1205
                     /locus_tag="VIC30_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEY7803326.1"
                     /translation="MKSRAAVAFAPGKPLEIVEIDVEPPRKGEVLIKITHTGVCHTDA
                     FTLSGEDPEGLFPVVLGHEGAGTVMEVGEGVTSVKPGDHVIPLYTAECGECLFCKSGK
                     TNLCVAVRATQGKGVMPDGTTRFSYNGQPLYHYMGCSTFSEYSVVAEVSLAKIAPDAN
                     PEHVCLLGCGVTTGLGAVKNTAKVQEGDSVAVFGLGGIGLAVVQGAARAKAGRIIAID
                     TNPDKFGLAKVFGATDCVNPKDHDKPIQEVIVQMTGWGVDHSFECIGNVNVMRAALES
                     AHRGWGQSVIIGVAGAGQEISTRPFQLVTGRRWLGTAFGGVKGRSELPGMVQEAMKGD
                     IDLAPFVTHTMGLDKINEAFDLMHEGKSIRSVVHY"
     gene            complement(1247..1540)
                     /locus_tag="VIC30_02675"
     CDS             complement(1247..1540)
                     /locus_tag="VIC30_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019577524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7803327.1"
                     /translation="MTFELAFVEEALSEWERLDGSVKQQFKKKIAQRLQSPRVAASQL
                     SGHKDRYKIKLRSVGYRLVYEVRDTELLVLVLVLVVAVGRRDRNAVYRVSDTR"
     gene            complement(1530..1778)
                     /locus_tag="VIC30_02680"
     CDS             complement(1530..1778)
                     /locus_tag="VIC30_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011659781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0097351 - toxin sequestering activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045927 - positive regulation of growth
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEY7803328.1"
                     /translation="MAHQILSEMAASISELKRDPMGTVAVGDGFPVAILNRNEPSFYC
                     VPAAWFEAMMTKIEDAELNAIANARDGQKVIRVTLDDL"
     gene            2077..>2191
                     /locus_tag="VIC30_02685"
     CDS             2077..>2191
                     /locus_tag="VIC30_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018914914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEY7803329.1"
                     /translation="MQRIEQHACFEGSQAVWQHTSETLGCDMKFGVFLPSAA"
BASE COUNT          531 a          595 c          573 g          492 t
ORIGIN      
        1 atcgtatttg cgctagatga tgtgtgaaac aaccaaccat ccataacccc tgcccgatat
       61 ccaacaatcc atttaatcca ataacgaggt ctttcatgaa atcacgtgca gctgtcgcct
      121 ttgccccagg caaacccttg gaaatcgtgg agattgatgt cgagccgcct cgcaaaggcg
      181 aagtgctcat caaaattaca cacaccggtg tgtgccatac cgatgccttc acactatcag
      241 gtgaagaccc ggagggcttg tttcccgtgg tgctcggcca cgagggtgcc ggcactgtta
      301 tggaagtcgg cgaaggggtc acaagcgtca aaccgggcga ccatgtcatt ccgctctaca
      361 ccgccgagtg tggcgagtgt ctgttttgta agagcggcaa gaccaacctc tgtgtagccg
      421 tgcgagccac tcagggtaag ggtgtgatgc ccgatggcac cacacgtttc agttacaacg
      481 gccagccgct ttatcactac atgggctgct cgacctttag cgaatacagt gtggtcgcgg
      541 aagtctcgct cgctaagatc gcccctgacg ccaaccccga acacgtttgc ctgctcggct
      601 gcggcgtcac caccggtctg ggtgcggtta agaacaccgc caaggtccaa gaaggtgaca
      661 gtgtcgcggt gtttggtttg ggtggtattg gactggctgt ggtccaaggt gcggcgcgag
      721 ccaaagccgg tcgcatcatt gccattgaca ccaatccaga taaattcggg ttggccaagg
      781 tctttggcgc caccgactgc gtgaacccca aagatcacga caaacccata caagaggtga
      841 ttgttcagat gaccggctgg ggtgtggatc acagctttga gtgcattggc aatgtcaacg
      901 tcatgcgagc cgcactagag tcagcacatc gtggctgggg tcagtcggtg atcattggtg
      961 tggccggtgc tggccaagaa atctcaaccc gtccgtttca gcttgtgact ggcaggcgtt
     1021 ggttgggcac tgcatttggt ggcgtaaaag gccgctcgga actaccaggc atggtgcaag
     1081 aggctatgaa aggtgacatt gatctcgcgc cgtttgttac ccacaccatg ggcttagaca
     1141 aaatcaatga ggcctttgat ctgatgcacg agggcaaatc gattcgcagt gtggttcact
     1201 actgatctca cgcgagggga caagccacca tcaaaatcaa cgcggtttac cgagtgtctg
     1261 acactcggta aaccgcgttg cggtctcgcc tgcccactgc cacaaccaac accaatacca
     1321 ataccaataa ctcagtatct ctgacctcat aaaccaagcg gtagccgacg cttcgcagct
     1381 tgattttgta gcgatctttg tgaccgctaa gttgtgaggc tgccaccctt ggggactgca
     1441 acctttgcgc tatcttcttc ttgaactgtt gcttaaccga gccatcgagg cgttcccact
     1501 cggacaacgc ttcttctaca aacgccagct caaaggtcat ctaacgtcac ccgaatgacc
     1561 ttctgaccgt cacgagcatt cgcgatcgca ttgagttcag catcctcgat tttagtcatc
     1621 atggcttcga accatgcggc cggaacacag tagaaagagg gctcgtttcg gttcaggata
     1681 gcaaccggga acccatcgcc cacagcaacc gtgcccatgg gatcacgctt gagttccgaa
     1741 atgctggcag ccatttcaga caatatttgg tgtgccatac cttagtcctg ttgttaattg
     1801 gtgccaacgt tagcaccttt aaagacacat acaaaagtgt ctttaagaac attaacattt
     1861 gaacaaaagc cctcctagaa cacagccgtg ctgatacgtc atgacgcctt tggtacgatg
     1921 tacaagggac ccatgagggg actcatgagg gaacgcaaga tggatgtgcg agagatgctc
     1981 tggggcaagt cgatgcgcat tgtggttcac tactgatctc acgcgacgag ccaaacacaa
     2041 ccaaacaaac cacaccaacc aaaaggaatc atcctgatgc aacgcattga acagcacgcc
     2101 tgctttgagg gtagccaagc ggtctggcaa cacacctctg agaccctggg ttgcgacatg
     2161 aagttcggtg tttttttgcc gagcgcggca t
//
LOCUS       DATBNL010000157         3052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161420, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000157 DATBNL010000000
VERSION     DATBNL010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161420"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..405)
                     /locus_tag="VIC30_02690"
     CDS             complement(<1..405)
                     /locus_tag="VIC30_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803330.1"
                     /translation="MRKKVEYAKSKNRSDYQRLQIDYSYAVALAKQYTEAVRCLEEVP
                     SDLVATIKSITGCNGKCGDCKDCGDAPKKVLGLGTAGVGGDGYIDDVELDGNDLIFTG
                     VGNGYDGIIDFTPLNNYVDDVTLSGSSLVFTGV"
     gene            complement(597..1184)
                     /gene="scpB"
                     /locus_tag="VIC30_02695"
                     /pseudo
     CDS             complement(597..1184)
                     /gene="scpB"
                     /locus_tag="VIC30_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388326.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
     gene            1278..1354
                     /locus_tag="VIC30_02700"
     tRNA            1278..1354
                     /locus_tag="VIC30_02700"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1312..1314,aa:Met,seq:cat)
     gene            complement(1815..2327)
                     /locus_tag="VIC30_02705"
     CDS             complement(1815..2327)
                     /locus_tag="VIC30_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803331.1"
                     /translation="MKTETTLTQEISAALAVSSYQGRKETRIPVLVLLQCSLAGAYGA
                     LSESLASLASITFDDLILISSEAPDAPGLEPPRFKQVQSDELVQAQGCLCCSMRSELA
                     QVLSQMFLQILRREIPAVRLVVIVTDATDAEPLEQTLRHAPFLGQRYRLAASHRLPPE
                     FAQGAKLQIR"
     gene            2416..>3052
                     /locus_tag="VIC30_02710"
     CDS             2416..>3052
                     /locus_tag="VIC30_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005665751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEY7803332.1"
                     /translation="MTITSQTQRVVDQTITTRHSIRAYLSKPVTREDIEEILAVAARA
                     PSGTNTQPWKAYVLTGQPLLEMTQEIVAAFLNPVLNETLHEEYRYYPTEWHSPYKERR
                     RKVGLDLYGLLGLTKDDRVGMQKQHARNFKFFDAPVGMIFSIDRAMGVGSWLDFGCFL
                     QNVMIAARARDLDTCPQAAFNKYHSIIRRRTGMPDQDIMMCGLALGYADPAA"
BASE COUNT          757 a          829 c          675 g          791 t
ORIGIN      
        1 tactcccgta aaaactaaac tacttccgct taatgtgaca tcatccacat agttattcaa
       61 aggagtaaaa tcaattattc catcataacc atttcctacc cctgtaaaaa tcaagtcatt
      121 accgtctaac tctacatcgt caatatatcc gtctccgcct actcccgcag tacctaatcc
      181 caacactttc tttggagcat caccgcaatc tttacaatcg ccacacttgc cattacagcc
      241 cgtaatactc tttattgtag ctactaggtc acttggcact tcttcgagac atctaacagc
      301 ttctgtgtat tgttttgcta aagctacagc gtaagaataa tctatttgaa gtctttgata
      361 atcgcttcta ttttttgatt ttgcgtattc tactttttta cgcattgctt caaaacagct
      421 tcctgtgtgt gttgatctga aacggactca acctgcacta tttcctcagt ctgaatgtca
      481 ggcgtcatca ggtttgcttg ttcaagcgag gcagactctt cttcgttgag attcaggctt
      541 tcatcaaggt cttgctcaat accctctgct tgactagcaa cagcttgcac cgttggttcg
      601 gcttgatcgc tttgggcttg ctctaagtcg ctttgaagtt caagtccggg gtcttgctga
      661 gcctgttcgg ctaggggttg tagtgctggc aactcatcaa gcgccctcaa gccaaggtca
      721 tctaaaaact gttttgtagt gcctaacaaa gccggacgcc cgggcccatc tctgtggcca
      781 atgacttcta cccagcctcg ttcctcaagc gtttttacaa tctgggtgga aaccgtgacc
      841 cctcgtatgg attcaatatc cccgcgagtc accggttgct tccatgcaat gatagcaagg
      901 gtttcgagta cagcgcgaga atacttcggt actcgttccg gattaagttg ctccaaaaag
      961 cgttgcatgc ttgcccgact ctgaaaccgc caacctgttg ccacctcggc aagctccaga
     1021 cccttatcct gccaagcaat ttgcagcgtt tccagccaag cattcagttg ctcggctgtc
     1081 accggctcag gctcaaacac cttttgcagc gatgacacgc tcatgggcgc atcggcacat
     1141 agcagcgccg tttccaaaac attgatagct tgttgatctt ccatgttttc ctaaagtcgt
     1201 tctaccctgc tacgggtaca tctactaaac cttgatttga gttaaacaac acaatttgct
     1261 atacttcttt catcagacgc ggggtggagc agtctggcag ctcgtcgggc tcataacccg
     1321 aaggtcgtag gttcaaatcc tgcccccgca accaaacttt agaaaccggc gtcagccggt
     1381 tttttttttc gctgatccac tatcgctgat tgagtcagat cctgacccac ccacctaact
     1441 aaggctcact gcgcatcaaa ttgtcgttgc gacatacaca cttaccaatc acaactcgaa
     1501 gcagattgtt tgttgtgaac atccgccgca tcggttttac gaaggaggta gttacattcg
     1561 actttgtgag tgtttaagcc tatgtgcagc gatcatccac gtcactgaac ggctccacgt
     1621 aaatcttata agacttgacc agaacaaggc tctagatccg cgcattgcaa atcaggcgtt
     1681 taatcaaccg caaaagcgcc aaaggataac cggtgggttt ttggttaaca gtcttgcctc
     1741 atcatactgc gaatccgctt ttcgccgccg atcttttcat cgtgagacac gcagcgttgg
     1801 gcaatgccaa cacatcaccg aatttgaagt ttagcaccct gtgcaaactc tggaggcaaa
     1861 cgatggctag ccgctagccg gtaacgctga ccaagaaatg gtgcatggcg caacgtttgt
     1921 tcaagcggtt cggcgtcagt cgcgtcggtc acaatcacaa ccaagcgcac cgcaggtatc
     1981 tcgcggcgca atatttgcaa aaacatttgg cttaacacct gggccaactc ggaacgcatt
     2041 gaacagcaaa ggcatccttg cgcctgcacc agttcatccg attgaacctg tttgaatctg
     2101 gggggctcta gcccaggggc atctggtgct tcgctggaga tgaggatcag atcatcaaac
     2161 gtgatcgatg ccagacttgc taacgattca gataacgcac cataggcacc tgccaacgag
     2221 cactgcaaca aaaccagcac aggaatgcgc gtctccttgc gtccctgata gcttgacaca
     2281 gccaacgcag cagagatttc ttgggttaac gtggtttcgg ttttcaacga ttgctcgaat
     2341 aatttaataa atgagctcac agtgtatggc agccaaacgt gccagtgcag cacgtgcaca
     2401 gcttaaggat aaaacatgac catcacgtct caaacgcaac gtgtcgtaga tcaaacgatc
     2461 acaactcggc actcaattcg cgcttacttg tccaaacccg tgacccgtga ggacatcgaa
     2521 gaaattttag cggtcgccgc gcgagcccct tctggcacga atacgcaacc ttggaaagca
     2581 tatgtattga ccgggcagcc gctgctagag atgacgcagg agatcgtggc cgccttttta
     2641 aatcccgtac taaacgagac gcttcacgaa gagtatcgct actacccaac tgagtggcac
     2701 tcaccttaca aagagcggcg tcgcaaggtc gggctcgatc tctacggcct actggggctg
     2761 accaaagatg atcgtgttgg catgcaaaag caacacgcac gcaactttaa gttttttgat
     2821 gcaccggttg gcatgatctt ttccatcgat cgagccatgg gggtaggttc ttggctggac
     2881 tttggttgtt tcttacaaaa cgtcatgatt gccgcacgag cacgagatct cgatacttgc
     2941 ccgcaagcag catttaacaa gtatcacagc atcatccggc gtcgcactgg catgccagat
     3001 caagacatca tgatgtgcgg cctggcgctt ggctacgctg accccgcggc ta
//
LOCUS       DATBNL010000158         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_151311, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000158 DATBNL010000000
VERSION     DATBNL010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151311"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VIC30_02715"
     CDS             <1..584
                     /locus_tag="VIC30_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY7803333.1"
                     /translation="GIYARHAPETVSVGIGLEDFDREGRLVSASWPGLTVISAYLPSG
                     SSGEERQAVKMRFLAAFEPWLQGLMQKHRETGHDFIICGDWNIAHKEIDLKNWRGNRK
                     NSGFLPEERQWLTNVFDDIGFVDVFRQLEPGEDHYTWWSNRGQAWAKNVGWRIDYQIA
                     TPGIAARAKQTDIYKAQRFSDHAPLTIDYDVSL"
     gene            636..1490
                     /locus_tag="VIC30_02720"
     CDS             636..1490
                     /locus_tag="VIC30_02720"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7803334.1"
                     /translation="MTITGPIMLITDLSARCDRAMDRAIGLAKDNDVGLVVLHVMDTP
                     WLTRLAKPDWQRQQQDHMEQARARLQHDLADQAVDVDLQIEKGNPVEVIEQVATAKQC
                     SLIVCGTARDETLGRVVLGNTVERLARRVHTPLLIVRHRPHNPYTDVIVATDFSKGSA
                     QALTTAKQLFGDAAVTLYHAFNEVAGIYELDQPTVVEQVKALEQQAQTFVQTTLSTQP
                     ADLSVVIEHGLVTQTLPARVAATSIKVVALGTHGATGIVRMAMGSVAETLLEKLNCDV
                     LIVPQAAA"
     gene            complement(1475..2149)
                     /locus_tag="VIC30_02725"
                     /pseudo
     CDS             complement(1475..2149)
                     /locus_tag="VIC30_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006227213.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT          567 a          587 c          578 g          426 t
ORIGIN      
        1 tgggcatcta tgcccgccac gccccagaaa cggtatcagt gggtattggg ttagaagact
       61 ttgatcgtga aggccggtta gtcagcgcaa gctggcctgg gctgacggta atcagtgcct
      121 atttaccatc aggctcaagc ggcgaagaac gccaggccgt caaaatgcga tttctggctg
      181 ccttcgaacc ttggctgcaa ggcttgatgc agaaacaccg cgagaccggc catgacttca
      241 ttatctgcgg cgactggaac attgcccaca aggaaattga cttaaagaac tggcgcggta
      301 atcgtaagaa ctctgggttc ttgccagaag agcgccaatg gttaaccaac gtgtttgatg
      361 acatcgggtt cgtagatgta tttcgccaac tcgaacccgg tgaggatcat tacacctggt
      421 ggagtaaccg gggccaagct tgggccaaga atgtgggctg gcgcattgat taccagatcg
      481 ccacaccagg tattgccgcc cgcgcaaagc aaacggatat ttataaggca cagcgattct
      541 ccgatcatgc gccactgacc atcgactacg atgtgtcatt gtgattgacc ggctgaccag
      601 gatgtcagcg agccttttta accaataggt gccacatgac cataactgga ccgattatgc
      661 tgatcacgga cttaagcgcg agatgcgatc gtgccatgga tcgtgcgatt ggcttagcca
      721 aagacaatga cgtgggtcta gtggtattgc atgtcatgga tacgccgtgg ttgacccggt
      781 tggcgaaacc ggactggcag cgtcagcaac aggaccacat ggagcaggcc cgggcgcgct
      841 tgcaacacga cttggctgat caagccgttg atgttgatct acagattgaa aaaggcaacc
      901 ctgttgaagt aattgaacaa gtggccacag ccaaacagtg cagcctgatt gtctgcggca
      961 ctgcgcgcga tgaaacactc gggcgcgtgg tgttgggcaa taccgttgaa cgactggcca
     1021 gacgtgtaca cacaccatta ctgattgtgc ggcaccggcc gcacaatcct tataccgatg
     1081 tcatcgtggc cactgacttc tcaaaagggt cggcccaagc actaaccacg gccaaacagt
     1141 tatttggtga tgccgcggtg acgctctacc acgcctttaa tgaagtcgcc ggaatctacg
     1201 aacttgatca accaaccgta gtcgagcagg ttaaggcact ggagcaacaa gcacagacct
     1261 ttgtacaaac gacattaagc acacaacccg ctgatttatc cgttgtcatt gaacatggct
     1321 tggtaacgca gacgttgccg gcacgagtgg cggcaacgtc catcaaggtt gtcgcgttag
     1381 gcacgcatgg cgccacaggc atcgttcgga tggccatggg cagtgtggcc gagacgcttc
     1441 tagaaaaact gaattgcgat gtgctgatcg tgcctcaagc ggctgcttga ggttgcgctt
     1501 gatcttgcgc ctggcggtca agcaaatcaa tgtcagaccg ccggcgccat agcaaccaca
     1561 atcccggcaa agcaatcaac acagtcatcg caaaaaacgt gggccagcca aatgactcca
     1621 cgagcggtgg cgttaaaggc ccagccaggt aggttcgtcc aactgcagct aacgccgata
     1681 gcaatgcgaa ttgcgtcgca gaaaactgat ggttacataa acccatgagc agcgccacaa
     1741 aagccgccgt acccatgccg ccgcacaagt tctccagccc cacaccaaag gccatgagcc
     1801 agatactttg aggtcccacg gcaattagcc agaatccgaa gttcgagact gcttgcaata
     1861 ccccaaaggc catgagcgag cggtaaaggc caagcttggc catgagagac ccgccagcca
     1921 acgccccaac aatagtggcc gtcagaccga gcaatttatt aaccgttccc acttcagttg
     1981 gcgaataacc cgctccgcga attagaaacg tggttgacaa cgccccggca aacgcatcac
     2041 cgagcttata gagcacaatc aatagcagca aggtccagac ttgcggtcgg gaaaaaaact
     2101 ctctgaaggg ctcaacaact gcaagcctaa gcgacacggg tgcttgcgcc ggatacta
//
LOCUS       DATBNL010000159         2755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_151313, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000159 DATBNL010000000
VERSION     DATBNL010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151313"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2657)
                     /locus_tag="VIC30_02730"
     CDS             complement(<1..2657)
                     /locus_tag="VIC30_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HEY7803335.1"
                     /translation="MNSPAASHLLATTPAPSDSRLREIPYNYTSFSDREVVSRLLGEP
                     AWLLLSELRSERRTGRSARMLYEVLGDIWVVKRNPYLQDDLLDNPKRRRSLVDALRHR
                     LGEIDQRRQSDNLQRDEKVAALLAHARRAVDAFERTFDETAELRKQVAKVLGKLTAKD
                     NIKFDGLSRVSHVTDATDWRVEYPFVVLTPDTEDEMAGLVRGCIELGLTIVPRGGGTG
                     YTGGALPLTWRSVVINTEKLETLGAVEMSALPGLSEPVPTVRAGAGVVTRRVAETAEQ
                     AGYVFAVDPTSADASCVGGNVAMNAGGKKAVLWGTALDNLAWWRMVDPQGNWLDVTRV
                     GHNMGKIHDVDVARFELSWSDGRYAPGHRVIKTQTLEIAGQQFRKVGLGKDVTDKFLA
                     GLPGVQKEGCDGLIVAAQWVVHRMPAHTRTVCLEFFGQARDAIPSIVEIKNYLDATGQ
                     QQGAILAGLEHLDERYLRAVGYVTKSKRGGMPKMVLIGDIVGDDDATVAAACSEVVRM
                     ANGRHGEGFVAVSSEARKKFWLDRARTAAIARHTNAFKINEDVVIPLPRMGEYTDAIE
                     RINIELSTRNKLRLLDALATRLNEPLPVAKQDAEDVATDDWLNERTSTTLALISQVRS
                     RWQWVLTDLDQPLHVLQDKFAEHGLQALLPQVQSRISTQQQATLFDIVQDRTLRISWK
                     TEVLTHLEATFAGSHLAPVLAELKAVHARVLKSRVFVALHMHAGDGNVHTNIPVNSDD
                     YLMLQEANETVARIMQIARDLDGVISGEHGIGLTKYEFLTEQELAPFQAYKREVDPEG
                     RFNAGKLMPGADLRNAWTPSFGLMGHESLIMQQSDIGQISESVKDCLRCGKCKPVCAT
                     HVPRANLLYSPRNKILATSLLVEAFLYEE"
BASE COUNT          603 a          829 c          740 g          583 t
ORIGIN      
        1 tgctcttcgt acaggaatgc ttcgacgagc aacgaggtcg ccagaatctt attgcgcggt
       61 gaatacagca agttggcacg cggcacatgt gtggcgcaaa ccggtttgca tttgccgcag
      121 cgcagacagt ctttaaccga ctcactgatt tggccaatgt cgctttgctg cataatgagt
      181 gattcgtgcc ccatcaaccc gaaactcggt gtccatgcat tacgtaaatc agctccgggc
      241 atgagtttgc ctgcattgaa ccgcccttcg ggatcaactt cgcgcttata ggcttggaac
      301 ggcgccaact cttgttcggt taagaactcg tacttggtta aaccaatgcc gtgttcgcct
      361 gaaatgacac catcaaggtc acgcgcgatc tgcatgatgc gggccacagt ttcattggct
      421 tcttgcagca tcaaatagtc atctgaattg accgggatgt tggtgtgcac attgccatca
      481 cccgcatgca tgtgcaacgc cacaaatacc cgacttttaa gcacgcgcgc gtgcacggcc
      541 ttcaattccg cgagcacggg cgcgagatgc gagccggcaa aggtcgcctc gagatgtgtg
      601 agcacctcgg ttttccagga gatgcgcagc gtgcgatcct gcacgatgtc aaacaacgtg
      661 gcttgctgct gcgtgctaat gcgcgactgc acctgcggca aaagagcctg caaaccatgc
      721 tcagcaaact tgtcctgcaa cacgtgcaac ggctgatcga gatcggtaag aacccactgc
      781 cagcggctgc gcacttggct gattaaggcc aacgtcgtgc tcgtgcgctc gtttaaccaa
      841 tcgtctgtcg cgacatcttc agcatcttgc ttggcaaccg gcaatggttc gtttaaccgc
      901 gttgcgagag cgtctagcaa gcgcagcttg ttgcgcgttg acagttcgat gttgatgcgc
      961 tcaatggcgt cggtatattc acccatgcgc ggcaacggga tcaccacgtc ttcattgatt
     1021 ttgaaggcgt tggtgtggcg tgcgatggca gctgtgcgtg cacggtccag ccagaacttc
     1081 ttgcgcgcct cagaactgac agccacaaaa ccttcgccat ggcgaccatt ggccatgcgc
     1141 acgacttcgc tacaggccgc tgccaccgtg gcatcatcgt caccgacgat gtcaccgatg
     1201 aggaccatct tgggcatacc accgcgcttg cttttagtga cgtaacccac cgcacgcaga
     1261 tagcgctcat cgaggtgctc gagaccagcc aagatagcgc cttgctgctg tcccgtggca
     1321 tccagatagt tctttatctc cacaattgac gggatggcat cacgcgcctg cccaaaaaac
     1381 tccaaacaca cggtacgcgt gtgtgccggc atgcggtgca ccacccattg cgcggccacg
     1441 atcaacccat cgcaaccctc tttttgcaca ccaggcaagc cagcgagaaa cttgtcagtc
     1501 acatccttac ctaggcctac tttgcgaaac tgctgaccag caatctcaag tgtttgggtc
     1561 ttgataaccc ggtggcccgg cgcataacga ccgtctgacc aagacaactc aaaccgggca
     1621 acatcgacat cgtgaatctt gcccatgttg tgacccacgc gggtgacgtc aagccagtta
     1681 ccttgcgggt ccaccatgcg ccaccaggct aggttatcta gggctgtgcc ccaaagaacc
     1741 gcttttttac cgccggcatt catggccaca ttgccgccca cacaggacgc gtcggctgat
     1801 gtggggtcta ctgcaaacac gtaaccggcc tgctcggccg tctcggccac gcggcgcgtg
     1861 accacgcctg cgcctgcgcg caccgtgggt accggttctg aaagaccggg caaggccgac
     1921 atttccactg cgcctagggt ctcaagcttt tctgtattga tcaccaccga gcgccacgtc
     1981 aatggcaaag cgccaccggt gtatccggta ccaccgcctc taggcacaat ggtcaaaccc
     2041 agctcaatac agccgcgcac caatcctgcc atctcgtctt cggtatcggg cgtgagcacc
     2101 acaaacggat actcaacgcg ccagtcggtc gcatcagtga catgcgagac tctcgacaag
     2161 ccatcaaact taatgttgtc tttggctgtg agcttgccga gcaccttagc gacttgcttg
     2221 cgcaactcgg cggtttcatc aaatgttcgc tcaaacgcat ccaccgcacg gcgcgcatgc
     2281 gccaagagcg ctgcgacttt ctcatcgcgc tgcagattgt cagactgacg acgctgatcg
     2341 atttcaccga gccggtgacg caaggcatcg accaatgaac ggcggcgctt gggattgtcc
     2401 agcagatcgt cttgcagata agggttacgc ttgaccaccc aaatatcgcc taacacctcg
     2461 taaagcatcc gagccgaacg gcccgtgcgg cgttcgctgc gcaactcgct taacaacagc
     2521 caggcaggct caccgagcag gcgtgacacc acctcgcggt ccgagaatga ggtgtagttg
     2581 tacgggattt ctcgcaaacg actatcggat ggcgcgggtg tcgtggcgag taggtgacta
     2641 gcggcagggg agttcatagg gaatcacacg agtggagatc gaggcaacta ggcatcactg
     2701 gcgtgcggcc agcccctcga tggcttcaaa ggggtatttt aggcgcaaag tcggg
//
LOCUS       DATBNL010000160         1908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_181227, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000160 DATBNL010000000
VERSION     DATBNL010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181227"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /locus_tag="VIC30_02735"
     CDS             complement(<1..802)
                     /locus_tag="VIC30_02735"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEY7803336.1"
                     /translation="MSDTIENLIDQATKAFEAAPDAASLENAKAQFLGKSGVLTDLMK
                     GLTKLEVAQKKEQGARINAAKQAIEAALTARRQALADAAMARELATQTVDVTLPGRGF
                     GRGAIHPVIRTWQRVEAIFGSIGFDVADGPEIENDWTNFTALNNPLNHPARSMQDTFY
                     VDMADSDGLPLLLRTHTSPMQVRYARMHKPPIKVIAPGRTYRVDSDATHSPMFHQVEG
                     LWIAENISFADLKGVYTDFMRQFFETDDLKIRFRPSFFPFTEPSAEIDM"
     gene            complement(933..1292)
                     /gene="rplT"
                     /locus_tag="VIC30_02740"
     CDS             complement(933..1292)
                     /gene="rplT"
                     /locus_tag="VIC30_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEY7803337.1"
                     /translation="MPRVKRGVTARARHKKVIAAAKGYRGRRGNVFRVAKQAVMRAGQ
                     YAYRDRRNKKRTFRALWIARINAATREHGVTYSTFIAGLKKAAIELDRKVLADMAVRD
                     KAGFAAIVNQAKSALSA"
     gene            complement(1305..1502)
                     /gene="rpmI"
                     /locus_tag="VIC30_02745"
     CDS             complement(1305..1502)
                     /gene="rpmI"
                     /locus_tag="VIC30_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012433738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEY7803338.1"
                     /translation="MPKMKTKKGAAKRFSVRGSGSIKRGQAFKRHILTKKTTKNKRHL
                     RGSAAVHASDVASVRSMMPFA"
     gene            complement(1711..>1908)
                     /locus_tag="VIC30_02750"
     CDS             complement(1711..>1908)
                     /locus_tag="VIC30_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEY7803339.1"
                     /translation="SPAADVERNVRAFMTQSFTKLDLVTREEFDIQSDLLRQTIAKAE
                     GLERQIQALEQRVAALENNKG"
BASE COUNT          445 a          507 c          480 g          476 t
ORIGIN      
        1 tcatgtcaat ctcagccgat ggctcagtga agggaaagaa cgagggcctg aatcggattt
       61 tgaggtcatc ggtctcaaaa aattgacgca taaagtccgt gtacacgccc ttcaagtcgg
      121 caaatgagat gttctcagca atccacaaac cttcgacttg atgaaacatg ggcgagtgcg
      181 tcgcatcact gtcaacacga taagtgcgac caggtgcgat tactttgatc ggtggtttgt
      241 gcatccgcgc ataacgaacc tgcatgggac tggtgtgcgt gcgaagcaac aatggcaaac
      301 catcactatc ggccatatca acgtaaaacg tatcttgcat ggaacgtgcc gggtggttca
      361 gtgggttgtt cagtgccgtg aagttggtcc aatcattctc aatttcagga ccatctgcta
      421 catcaaagcc gatagaccca aaaatggctt cgactcgctg ccaggttcga atcaccgggt
      481 gaatcgcacc acgcccaaaa ccacggccag gcagcgtcac atcgaccgtc tgagttgcca
      541 gctcacgcgc catggctgcg tcagcaagtg cctgtcgtct agcggtaagc gctgcctcaa
      601 tagcttgctt ggcggcgttg atgcgagcgc cctgctcttt cttttgggcc acttcgagtt
      661 tggtcaaccc tttcatcagg tcagtgagca caccactctt gcccaaaaac tgtgccttgg
      721 cgttttctag gcttgcggca tcaggcgcgg cttcaaacgc tttggtggct tgatcaatga
      781 gattttcgat tgtgtcagac atggcattta ttacgatgca actgcattag gaaaaggtca
      841 ctgcagcaaa aacgaacgga gccacttggg ctccgtctgc aaggtgcgca ctcaacatga
      901 aaactgaatc atgcgcctag cgagtaaagc tattacgctg acaaagcaga tttcgcttga
      961 ttgacgattg cggcaaagcc agctttgtca cgcacagcca tatcagcaag caccttgcgg
     1021 tctagctcga tggctgcttt cttcagacca gcgataaatg tgctgtaggt cacgccatgc
     1081 tcacgcgtgg cggcgttgat acgcgcgatc cacaatgcgc ggaatgtacg ctttttgttg
     1141 cggcgatcac gataggcgta ctgaccagca cgcatgaccg cttgcttggc aacgcgaaac
     1201 acattaccac gacgaccgcg gtagcctttg gctgcagcaa tgactttttt gtgacgtgca
     1261 cgggcggtta caccgcgttt tactcgaggc atatcagtct cctatcaggc gaacggcatc
     1321 atgctacgta cggatgcaac atccgaagca tgaacggcag ctgagccacg caagtggcgc
     1381 ttgttcttgg tcgttttttt ggtcaggatg tggcgcttaa atgcctgacc acgcttgatg
     1441 gagccactgc cccgcacgga aaagcgcttt gcggcgcctt tcttggtttt catctttggc
     1501 atgatgattc ctgttatgac atgtcgtcta ggtggtttgt cgccattgac aaactctttc
     1561 taacccgacc acacttggta tattccgcat tcgcaaatgc aggaaagcca ttgattgtat
     1621 aacattttcc gctttcgtga ccagcccagc aaaccgacat gcttagccag agcatccggt
     1681 gtgactcacc acgatcactg ggcaaaacgc ttagccttta ttgttctcca aagcggccac
     1741 gcgttgttca agtgcttgta tctgacgctc aagcccttca gctttcgcaa tcgtctgtct
     1801 gagcaagtct gattgaatgt caaactcttc gcgtgtcaca agatctagct ttgtgaatga
     1861 ttgggtcata aaagcccgca cattacgctc gacatctgcc gccggact
//
LOCUS       DATBNL010000161         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_81788, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000161 DATBNL010000000
VERSION     DATBNL010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81788"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VIC30_02755"
     CDS             <1..399
                     /locus_tag="VIC30_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEY7803340.1"
                     /translation="FCTTDKAYQRFRRVVRNPWVQALYLSLGINQRMSIATRARRQSQ
                     QAQTRSHAVWHDVCLDTIDGALQRAQTRTLIHGHTHRPGHYVDQVGGQPIDRWVLPDW
                     ESDHLSQGESVRGGWLVVDDRGVRAINLTT"
     gene            complement(396..1211)
                     /locus_tag="VIC30_02760"
     CDS             complement(396..1211)
                     /locus_tag="VIC30_02760"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_039051714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEY7803341.1"
                     /translation="MTETTLHLLKAFLLGIVEGATEFLPVSSTGHLILVGAWIDFQST
                     ESKVFEVVIQLGAILAVVWIFRQRVWQLITGAWQRDVVELSLMRNLLIAFLPAAIIGG
                     IFISAIKALFFHPGVVVVMLVLGGIIMIWVERTSTKRKSPTALSLETISWKQALAVGC
                     AQCIAMIPGTSRSGATIIGGMIAGIERKTATEFSFFLAMPTMFAAAIYDSYKHAAELS
                     QTDVMAIAVGFVMAFISALFVVRGLLAFLARHTYQAFGWYRIGLGLVVAFFIF"
     gene            complement(1208..>2110)
                     /locus_tag="VIC30_02765"
     CDS             complement(1208..>2110)
                     /locus_tag="VIC30_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY7803342.1"
                     /translation="YQQAVPEVSDSLRERTAQTVLRLLGHPVSSEESEDTSRKDRRDR
                     KENREPTESFGVEERNMVSGVLTLADRTVRSIMTPRIDVSWINAEDEPDAIRQQIEQA
                     PHSFFPVCRGDFDNIIGIGRAKRMITDLLTHGHIREKRLQEPVVVHDTISIIRLIDTL
                     KHAKGQLVLVANEFGNIEGLVTPLDVFEAIAGEFPDENEVPDIVPDGENRWRIDGAAD
                     LHLLEQVLQTDGLVNDDEDYTTLAGYLLNYFGQLPNVGDRCELDAADALFTFRVVRLE
                     RRRIAMVHVEKHPKTEQVLSGEHE"
BASE COUNT          547 a          609 c          525 g          429 t
ORIGIN      
        1 ttttgcacca cagacaaggc ctaccagcgc tttagacggg tggtgcgaaa cccttgggtg
       61 caagcgctgt atctgagcct tggcatcaac caacgcatga gtatcgccac acgcgcacgt
      121 cgccagagtc aacaggcgca gactcgaagc catgccgtct ggcacgacgt ttgtttagat
      181 accattgatg gtgcattgca gcgcgcccag acccgaacgc tgattcacgg gcacacgcac
      241 cggccgggcc actacgttga tcaagtaggc ggacagccaa ttgaccgttg ggtgctgccc
      301 gactgggagt cagatcacct tagccaaggg gagtccgttc ggggtggctg gcttgttgtc
      361 gatgatcgcg gtgttcgcgc catcaacctc acgacttaaa aaatgaagaa agccaccacc
      421 aggccgagtc cgatgcggta ccaaccaaat gcctggtatg tgtgacgtgc cagaaaggcc
      481 agcaaaccgc gcaccacgaa caaagcactg ataaatgcca tcacaaaacc cacagcgatg
      541 gccatcacgt cagtttgtga cagctccgct gcgtgtttat aggagtcgta aatggccgca
      601 gcaaacatcg tgggcatggc caaaaagaaa gaaaactcgg tggccgtctt acgctcaatg
      661 ccggcaatca tgccgccgat aatcgtcgca cccgaccggg atgtcccagg aatcatggca
      721 atacattgcg cgcagcccac cgctaacgcc tgtttccacg agattgtctc aagcgacaac
      781 gccgtggggg attttcgctt ggtgctcgtg cgctcaaccc aaatcatgat gatgccgcca
      841 agcactagca tgacaaccac cacacccgga tgaaaaaaca atgccttgat cgcggagata
      901 aaaataccgc cgatgatggc cgctggcaaa aaagcaatca acaagttgcg catgagcgat
      961 aactccacca catcgcgctg ccaagcaccc gtgatcaatt gccaaacgcg ttgccgaaaa
     1021 atccatacca ccgccaaaat ggccccaagc tgaattacaa cctcaaagac cttgctctca
     1081 gttgactgaa agtcgatcca ggcacccacc aaaatcaggt ggcccgtgct tgagaccggt
     1141 aaaaactcgg ttgcaccttc cacaatgccc agcagaaatg cctttaacag gtgtaatgtg
     1201 gtttcagtca ctcatgttct ccggatagaa cctgttctgt tttggggtgt ttttcaacat
     1261 gaaccatggc aatacgtcga cgctcgagtc gaaccacccg aaacgtaaac aaggcatcgg
     1321 cagcgtcaag ctcgcagcgg tcaccgacat taggcagctg accgaagtaa ttaagcaaat
     1381 agcctgctaa ggtggtgtag tcctcatcat cattaacgag cccgtcagtc tgaagcactt
     1441 gttcaagcaa atgcaggtca gcggcaccat cgatgcgcca gcgattctcg ccatcaggca
     1501 cgatgtcagg cacttcgttc tcatcgggaa actcgccggc gatggcctca aacacatcta
     1561 gcggcgtcac gagcccttcg atattaccga actcattggc cactaaaacc aactggccct
     1621 tggcgtgctt taaggtgtca atcaagcgaa tgatactgat ggtgtcatgc accacgacag
     1681 gttcttgcag gcgtttctca cggatgtgcc catgggtgag caaatccgtg atcatgcgct
     1741 tggcacgccc aatgccaatg atgttgtcaa agtcacctcg gcaaaccgga aaaaaactgt
     1801 gcggtgcttg ctcaatttgc tggcgaatcg catcaggttc atcctcagca ttgatccaag
     1861 agacatcgat gcgcggggtc ataatagacc gcacggtacg atcagccaag gtcaagacgc
     1921 ccgaaaccat gttgcgctct tcaacaccaa aggactccgt tggctcccga ttctccttgc
     1981 gatctcgacg atctttacgg cttgtgtctt cagactcctc agaactgacc gggtgaccga
     2041 gcagacgcaa taccgtctgc gcggtacgtt cacgcaatga atcgcttacc tcaggtactg
     2101 cttgctgata
//
LOCUS       DATBNL010000162         3182 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_91659, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000162 DATBNL010000000
VERSION     DATBNL010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91659"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VIC30_02770"
     CDS             complement(<1..226)
                     /locus_tag="VIC30_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803343.1"
                     /translation="MPGNTATGNTASLPRTRFHPKIVGLALIGTIDGGPYVQQMRHNV
                     RETSFWLRFLAWVVSDVVSLLCRCFNQLNYF"
     gene            348..1088
                     /locus_tag="VIC30_02775"
     CDS             348..1088
                     /locus_tag="VIC30_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine synthase"
                     /protein_id="HEY7803344.1"
                     /translation="MTDFDDQPLVSEQSGTRYLHFDSPWIQGAMELRRPDALVLSYTE
                     QMMAWLLFLQPESDRILGQLGLGAASMTRFCYRHLSNPLVVVERNSAVIRVCEQYFRL
                     PRHPRLTVCEADAGKWVLAPENAQTLAVLMVDLYDTDALGPVCDSLAFYQGCFNCLSE
                     PGVLSVNLFGKHESFETNLQHLNAVFEGRLVLLPPVDEGNQIVLAFKGPPLSADMDQL
                     MQRAQWLEQAYRLPAKRWARTIGPVKHL"
     gene            1165..2706
                     /locus_tag="VIC30_02780"
     CDS             1165..2706
                     /locus_tag="VIC30_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008644087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA synthase"
                     /protein_id="HEY7803345.1"
                     /translation="MSNLYTVLSEQFLSSPSKVALQTPDAQWTYAQLHEAVGQMANWL
                     DALALPAGSRVAAQVEKSPQALFLYLATVRAGLTYLPLNTAYRESEMAYFLDNAKPAV
                     VVCDPGNLDWIQGLALASDVAHVVTLDAQGRGTLAAQTESRPTGFKDAITADDDLAAI
                     LYTSGTTGRSKGAMLTQRNLISNAQTLHQYWGWSRDDTLLHMLPIFHIHGLFVACHGA
                     LMAGARMIWLPKLDVDLALHYLPESNLMMGVPTYYVRLLADARFDREVARNMRLFVSG
                     SAPLLLETFDAFEARIGQPILERYGMSETGMLTSNPYLSAEGPRMGSTVGKPLPGVDV
                     RVVNDQGDPCGVGEIGHVQVKGPNVFAGYWQMPEKTREEFTADGWFKTGDLGRWGGQT
                     PQGLDIADDYLSIVGRSKDLIISGGYNVYPKEIESVIDDMPEVLESAVIGVAHADFGE
                     AVVAVVVPAAGAHIDVDAMVAMLKTQLANYKVPKQIHVVSELPRNTMGKVQKNVLREQ
                     YGSMA"
     gene            2740..>3182
                     /locus_tag="VIC30_02785"
     CDS             2740..>3182
                     /locus_tag="VIC30_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HEY7803346.1"
                     /translation="MRSLIRWFWLLPLTLFISACASGPQVKSDYDRSADFAAYRTFAF
                     MEPLGTDRAGYTTLLTQRLKTLSRLQMEQRGYVYDAESPDLLLNFLAQSQQKTEYVPP
                     PPMPWGPNYYGYRMGWYDPWVGYGFGPDVIQYTQGVLSIDLIDAR"
BASE COUNT          663 a          790 c          940 g          789 t
ORIGIN      
        1 gaaagtaatt cagttgatta aaacagcgac acagcaacga cacgacatct gaaaccaccc
       61 aggccaaaaa gcgcagccaa aatgatgtct ctcgtacgtt gtgcctcatc tgttgtacat
      121 aagggccacc atcaatggtg ccgattaatg ccaagcccac tattttaggg tgaaagcggg
      181 ttcttggcaa actagcggtg ttacctgtag cggtgttacc tggcatgtga cgttgccgcg
      241 aggcgctgat gttgtatttc ctcgaggtcc ctgtaccgtc gactgcacag gccgtggcgc
      301 taaactgtgt gtttgaagca tatcgacttc ttagacaagc gccacgcatg acagactttg
      361 acgatcagcc tctagtgtcc gagcagtctg ggactcggta cctgcacttt gattcgcctt
      421 ggattcaggg cgccatggaa ctgcgtcgcc ccgacgcgct ggtgttgtct tacaccgagc
      481 aaatgatggc ctggctctta tttttgcagc ccgagtcaga tcgtattctc gggcaactcg
      541 ggttaggcgc tgcgtccatg acgcgctttt gttatcgcca tttgagcaac ccgctggtgg
      601 tggtcgagcg caatagtgct gtgattcggg tctgcgagca gtatttccgg ctgccgcgac
      661 acccacgttt gacggtttgc gaggcagacg ctggcaaatg ggtgctggca cctgagaatg
      721 cgcaaaccct ggcggttttg atggttgatc tatatgacac cgatgcgctt ggcccggtgt
      781 gtgattcctt ggcgttttat cagggttgct ttaactgctt gtctgagccc ggtgtattga
      841 gcgtgaatct gtttggcaag cacgagagtt tcgagacgaa tctgcagcat ctgaatgcgg
      901 tgttcgaggg tcggctcgtt ttgttgccgc cagttgatga aggcaatcag atcgtgttgg
      961 cgtttaaagg gccgccattg tcggccgaca tggaccagtt gatgcaacgc gcgcagtggc
     1021 tagaacaagc ttatcgctta ccggccaagc gttgggctcg cactatcggg cccgtcaagc
     1081 acttatgatg cggtcaaggc ggtattcaaa gagacagttc gtgccttggc ctgtgaatca
     1141 acctgatttg ttaaggaagc agttgtgagt aacttgtaca cggttttgag tgaacagttt
     1201 ttaagctcgc catcgaaggt agcgttgcaa acacccgatg cgcagtggac ctatgcgcaa
     1261 ctgcatgagg cggttggtca aatggcgaac tggcttgacg cgttggcgct gcctgctggg
     1321 tcacgcgtgg ccgcgcaagt agaaaagtca ccccaggcct tgttccttta cttggccacg
     1381 gtgcgggccg gtttgaccta cctgccactg aacacggcct atcgcgaaag tgagatggcg
     1441 tatttcttag ataacgccaa gccggccgtg gtggtctgtg acccaggcaa tcttgattgg
     1501 atacaaggtt tggctctggc gtctgacgtg gcgcacgttg tcacgcttga tgcccagggt
     1561 cgcggtacgc ttgccgcgca gaccgaatca cgaccaacgg gattcaagga tgcgatcacc
     1621 gccgacgatg atttggcggc gattctttac acatcgggta ctactggacg aagcaaaggc
     1681 gccatgctca cgcaacgcaa tctgatctcc aatgcgcaga cattgcatca gtattggggt
     1741 tggtcacgtg acgacacgtt gttgcacatg ctgccaattt ttcatattca tggtctgttt
     1801 gttgcttgcc atggcgcgct catggccggt gcgcgcatga tctggttacc caagcttgat
     1861 gtggacttgg cgctgcacta cttgccagag agcaacctca tgatgggtgt gcccacgtat
     1921 tacgtgcgcc tgttagccga tgcgcggttt gatcgggagg ttgcacgcaa catgcgtttg
     1981 tttgtttcgg gttcagcacc gctgctgctt gaaacgttcg atgcgtttga agcccggatc
     2041 ggacagccga ttctcgaacg ctacggcatg agcgaaaccg gcatgctgac ctcaaacccg
     2101 tacttgtcag ccgaaggccc gcgtatgggg tcgacagtgg gtaagccatt gcctggcgtg
     2161 gatgtgcgag tggtcaatga ccaaggtgac ccttgtggtg taggtgaaat cggtcatgtt
     2221 caggtcaaag gtccgaatgt gtttgccggg tattggcaaa tgccagagaa gacccgcgag
     2281 gagttcactg ctgatggctg gtttaaaacc ggtgacttgg gacgctgggg tggacagacg
     2341 ccacaagggc ttgacattgc ggatgactac ctctcgatcg tcgggcgtag caaagacttg
     2401 attatctcgg gcggctacaa cgtctacccc aaagagattg agtcggtgat tgacgatatg
     2461 cctgaggtgc tggaatccgc cgtcatcggt gtggcgcacg ccgattttgg ggaggcggtg
     2521 gtggcggttg tggtgccagc cgctggcgcg cacattgatg tggatgccat ggtcgcgatg
     2581 cttaaaaccc agttggccaa ttacaaggtg cctaagcaga ttcatgtcgt gagcgagttg
     2641 ccacgcaaca ccatgggcaa ggtgcagaag aatgtgttgc gcgagcaata cggttcaatg
     2701 gcatgataca ttagggaaat tactagtgct ggtgccgcga tgcgatcact gatccgttgg
     2761 ttttggttgt taccactgac cttgtttatc tcggcttgcg cctctgggcc gcaggttaaa
     2821 agcgattacg accgcagtgc tgacttcgcg gcctaccgaa cgtttgcctt tatggagccg
     2881 ttaggcaccg atcgcgcagg ctataccacc ctgttgacgc aacggctcaa gaccttgagc
     2941 cgtctgcaaa tggagcaacg tggctacgtc tacgatgctg aatcacctga tctgttgctg
     3001 aatttcttgg cgcagtcgca gcaaaaaact gaatatgtcc caccaccacc catgccttgg
     3061 ggcccgaatt attatggcta ccgcatgggc tggtatgacc cttgggttgg ttacgggttt
     3121 ggtccagatg tgattcaata tacccaaggt gtgcttagca ttgatttaat cgatgcgcgc
     3181 aa
//
LOCUS       DATBNL010000163         2717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_61738, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000163 DATBNL010000000
VERSION     DATBNL010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61738"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="VIC30_02790"
     CDS             <1..1247
                     /locus_tag="VIC30_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY7803347.1"
                     /translation="EQGVPVVTIGGNTGLCGGATPDNSGNAVMLSTARLNKVRSIDTD
                     NDTMTVEAGCILQNVQEAAREAGRLFPLSLAAEGSCTIGGNLATNAGGTQVLCYGNAR
                     DLTLGLEVVTAEGEVWDGLRGLRKDNTGYDLRDLFVGSEGTLGIITAATLKLYPLPVA
                     QRTAMLAFASLEDSVTFLSRARQGFGAALTGFEVMAGPVLHAVVRLFTDQRIPFEGES
                     ANSPWFALLELSDSESAEHAESRFEEVLGQAIEDGLLLDAAIAQSVAQSKAFWHLRES
                     IPLAEAELGKSVKHDVSIPISRIAEFVAVTNEALQTKFPGINNVVFGHLGDGNLHYNV
                     APGEGQAEGEILSLQPQIYELVHDSVATFNGSISAEHGIGQLKVNELTRYKSGLELKL
                     MRQIKQALDPKGVLNPGKVVNV"
     gene            complement(1219..2094)
                     /gene="mutM"
                     /locus_tag="VIC30_02795"
     CDS             complement(1219..2094)
                     /gene="mutM"
                     /locus_tag="VIC30_02795"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEY7803348.1"
                     /translation="MPELPEVETTRCGIEQAAVGYPLVAMPVRERRLRWPIETALPEC
                     VLGLTLSACGRRGKYLLMQFETAGTIIVHLGMSGSIRACDPETLWQTHDHLQWEFEGG
                     RCLRYHDPRRFGSVLWHPASDGPVAAHPRLAGLGVEPLGEDFTVEHLLNGVKGKSLSI
                     KQALLAGHIVVGVGNIYASESLYRAKIHPEMPAGDLTRTQAKRLVPAVVQTLNDALAS
                     GGSTLRDYVNATGEPGSYFTLHASVYDKQGEPCKRCSTRIKRIVQGQRATYYCPRCQR
                     LKPPTRLKRSPPSQG"
     gene            2239..>2717
                     /locus_tag="VIC30_02800"
     CDS             2239..>2717
                     /locus_tag="VIC30_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803349.1"
                     /translation="MGDLLRLKRCAMAVMIGLSGSACAQDVPTVEPAPPIKVDDQAPE
                     TIERVQQITLQAGQLPHVRLSADIMYKVLAAEIAVQRGSILPAANTTLELARDTADPR
                     LAQRAVELYAAIGDVQGALNAAEVWQANAPESEEAISTRLALTAAAGQTAGLAEALA"
BASE COUNT          562 a          717 c          842 g          596 t
ORIGIN      
        1 tggagcaggg tgtgcccgtg gtgaccattg gtggcaatac cggtctgtgc ggcggtgcca
       61 cccctgacaa cagcggtaat gcggtgatgt tgtctacggc acggcttaat aaagtgcgtt
      121 cgattgatac cgacaacgac accatgacag tggaagccgg ttgtatcttg caaaacgttc
      181 aagaagctgc acgcgaggct ggccgtttgt ttcctttgag tctggccgcg gaaggcagtt
      241 gcaccatcgg tggcaaccta gcgaccaacg ccggcggcac acaggtgctt tgctacggca
      301 acgcccgtga tctgacactt ggccttgaag tggtgacagc agagggcgag gtctgggatg
      361 gactgcgggg gttacgcaaa gacaacacag gttacgacct acgagacctg tttgtgggca
      421 gtgagggcac acttggcatc atcacggccg cgacgctaaa gctctatccg ttgcccgtgg
      481 cccagcgtac ggcgatgctc gcctttgcca gccttgaaga ctcggtgacc tttctgtcgc
      541 gagcacgcca ggggtttggt gcagcgctca ccgggttcga agtcatggct ggacctgtct
      601 tgcatgcggt ggtcaggctc tttaccgatc agcgcattcc gttcgagggt gagtcagcga
      661 actctccttg gtttgcgctg cttgagctgt ctgacagcga aagtgctgag catgccgagt
      721 cgcggtttga ggaggtcttg gggcaggcca ttgaggatgg gttgttgctt gatgctgcca
      781 ttgcccagtc agtggcacaa agcaaggcgt tttggcattt acgcgaaagc attccgttgg
      841 ccgaagccga gcttggcaag agcgttaaac atgatgtgtc gatcccgatt tcccggattg
      901 ctgagtttgt tgcagtcacc aacgaggcgt tgcagaccaa gtttccaggc atcaacaatg
      961 tggtgtttgg tcatttgggt gatggcaatc tgcattacaa cgttgcgccc ggcgaaggtc
     1021 aggcagaagg tgaaatcctg tcgctacagc cccagatcta tgaactcgtg cacgacagtg
     1081 tggcaacgtt taacgggtct atcagtgctg agcatgggat cggtcagctc aaagtcaacg
     1141 agctgacacg ctataagtcc gggcttgagc taaaactcat gcgacaaatc aagcaagcgc
     1201 tcgaccccaa aggtgtgctc aaccctggga aggtggtgaa cgtttaaggc gcgttggcgg
     1261 tttcaagcgc tggcagcgcg ggcaatagta cgtggcgcgc tggccttgga cgatgcgctt
     1321 gatgcgtgtg ctgcaacgtt tgcacggttc accttgtttg tcatagaccg aggcgtgcaa
     1381 ggtgaagtat gaccctggct cacccgtggc attgacatag tctcttaggg tgctgccgcc
     1441 gcttgccagg gcatcattta aggtttgcac caccgctggc actaggcgct tggcttgcgt
     1501 gcgtgtaagg tcgcctgcgg gcatctctgg gtggattttg gcgcggtaca ggctctcgga
     1561 ggcgtaaata ttgcccaccc ccacgacaat atggccggca agcaacgctt gtttgatgct
     1621 caatgacttg cctttgacgc cgttaagcag atgctcaacg gtgaaatcct cgcccagtgg
     1681 ctcaacaccg aggccagcca gtctcggatg cgccgcaaca ggcccgtcac tagccgggtg
     1741 ccacaacaca gagccaaatc gtcgtgggtc gtgatagcgc aggcagcgcc cgccctcgaa
     1801 ctcccattgg agatggtcgt gggtttgcca cagggtctcg gggtcacaag cacgaataga
     1861 gccggacatg cctagatgga caatgatggt gccagctgtc tcgaattgca tcagcaggta
     1921 cttacctcga cgcccgcaag ctgataaggt aagtccaagc acgcactcag gtagtgcggt
     1981 ctcgatgggc cagcgcagac gtcgttcacg cacaggcatc gctaccagtg gatatcccac
     2041 ggctgcttgt tcaatgccac atcgggtggt ttcaacttct ggcagttccg gcatggtcgg
     2101 gtgctaagat gcaaaggaat gatcaatggc tgacgaattg tgccacggtt gctcagggtt
     2161 cgataacaag cgcttagcgt ttaaatcgga tgaggttatt agggtcgttg ggttcgttgt
     2221 gctggttggg agttaagagt gggcgatttg ctgcgactaa aacgctgtgc gatggcggtg
     2281 atgatagggc tgtctggtag cgcttgcgca caagacgtac ccactgtcga gccagcccca
     2341 ccaatcaagg tcgatgacca agcgcccgag acgattgagc gcgtccaaca aattaccttg
     2401 caggcgggcc agttgccgca tgtcaggttg tcagccgaca ttatgtataa ggtgctggcc
     2461 gctgaaatcg ccgtgcagcg cggttctatc ttgcccgcgg ccaacaccac gctagagctt
     2521 gcccgcgaca cggccgaccc ccgtttggcg caacgcgcag tcgagctcta cgcggccatt
     2581 ggcgatgtgc agggtgcatt gaatgccgct gaagtttggc aggcgaacgc gcccgagagc
     2641 gaagaggcca tttccacccg attagcacta acggctgcag ccggccaaac cgctggtttg
     2701 gctgaggctc ttgcaga
//
LOCUS       DATBNL010000164         2112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_11965, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000164 DATBNL010000000
VERSION     DATBNL010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11965"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VIC30_02805"
     CDS             complement(<1..192)
                     /locus_tag="VIC30_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007833089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY7803350.1"
                     /translation="MSDFVFAPPAVVAIPVVGSEQSFAVRRVFCVGRNYAEHAKEMGF
                     TGREDPFFFCKPADALVVVP"
     gene            505..585
                     /locus_tag="VIC30_02810"
     CDS             505..585
                     /locus_tag="VIC30_02810"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803351.1"
                     /translation="MLAKDILHADETPVTTLKPGEVGTTA"
     gene            complement(691..1803)
                     /locus_tag="VIC30_02815"
     CDS             complement(691..1803)
                     /locus_tag="VIC30_02815"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803352.1"
                     /translation="MAITGPRQSGKTTIARALFPQKPYVSLENLDERQFALSDPKRFL
                     SRFPDGAVIDEAQRCPDLFSWLQGVVDERRVMGQFVLTGSAQFDLMVGITQSLAGRVG
                     RLELLPLSLQEISQVQAVPDRLSQMLWRGGYPALYDRLVQPNDWFANYMATYIERDVR
                     QIIKVQDLTQFQLFVKMCAARTGQLLNLSSLAADCGISHVTARQWLSVLQTSYLVTLL
                     HGHHRNFGKRLVKAPKLYFLDVGLAAWLLGIRDADSLETHASRGALFETWVVSEHCKN
                     RFNHGEPLDLFFWRDSNGTEVDLILETPSGLKPVEIKSGCTFASDWGKAIHQWVKQAQ
                     QDKAAIVLKPCVVYGGQTSQDRESLDLLSWRDIKDL"
BASE COUNT          560 a          585 c          489 g          478 t
ORIGIN      
        1 tggcaccact accaacgcat cggctggctt gcaaaagaaa aacggatctt cacgtccagt
       61 gaaacccatt tctttagcat gctcggcata gttacgcccc acacaaaaca cacgacgcac
      121 ggcaaatgat tgttcactgc ctaccactgg aatggccacc accgcgggag gcgcaaatac
      181 aaaatcagac atgacgctgt ccttgttcaa tcaaaattaa cctactccga ttctagcgga
      241 gagaatctgt tgaggtgttg ttggggtgtt gtcggggttt tgggttacac gaccgttaaa
      301 cacatctcgt tggtgacatt gccttgcccg atagtgacgg gcatcaatac agatacaccc
      361 ccaaaccagc ggttaccgcc gaacgtgctt cgcagaccaa gcgccactac atgcccggca
      421 cctttgcgtt gaacgtcatg tgcgtgacaa gtgagcgtgt gtggcgagcg actcaagcca
      481 ctggtagagc gcttgagcga gatcgtgctg gccaaggaca ttttgcacgc cgatgaaacg
      541 ccagtgacca cgcttaaacc cggtgaggta ggcacgacag cttaaatgtt gtcacttatg
      601 acttcaccat gggccgctgt ggcaaacatg ccagtgagtt cctcttggat caaacttcgg
      661 catattcaac catgccatcg ttgctagaac tcagagatct ttaatatcac gccaacttaa
      721 aaggtccaat gattcacgat cttgggatgt ttgaccaccg taaactacac agggctttag
      781 cacaatcgcc gctttatctt gctgcgcttg tttaacccat tggtgaatcg cctttcccca
      841 gtcactggca aatgtacagc ccgacttaat ttccacgggc ttcaaaccac tgggtgtctc
      901 cagaatcaaa tcaacttccg tgccattgct gtcgcgccaa aagaaaaggt cgagtggctc
      961 gccatgatta aaacgattct tgcaatgttc gctgacaacc cacgtctcaa ataatgcgcc
     1021 acgcgaggca tgggtctcca agctgtcagc atcccgaatg cctaacagcc aggctgccaa
     1081 gcccacgtct aaaaagtaaa gcttgggcgc tttcaccaac cgcttaccaa agtttcgatg
     1141 atgaccgtgc aatagtgtca cgaggtaact ggtttgcaac acactgagcc actgccgcgc
     1201 agtaacgtgg ctgattccgc agtcagctgc caatgacgac agattcagca actggcctgt
     1261 gcgtgccgcg cacattttta caaacaactg aaactgcgtt agatcctgaa ccttgataat
     1321 ctgccgcaca tcacgctcaa tatatgtagc catatagttg gcgaaccaat cattaggctg
     1381 cactagccta tcgtacagag ctggatagcc gcctctccag agcatctggc tcaatcgatc
     1441 aggcacagct tgtacctgac taatctcttg caaactgagc ggcaaaagct ctagccggcc
     1501 aacccggcca gccaatgact gtgtgatgcc aaccataagg tcaaactgcg ctgaaccggt
     1561 caatacaaac tgacccatca cccgacgctc atcgaccacg ccttgcaacc atgagaacaa
     1621 atccggacag cgctgtgcct catcgatcac cgcaccatcg ggaaaacgac ttaaaaaccg
     1681 cttggggtca ctaagcgcaa actgcctttc atcgaggttt tccaaggaaa catagggctt
     1741 ttgcgggaag agtgctcgcg caatcgtggt cttgccggat tgccttggtc ctgtaatggc
     1801 caagaccgga aatccttttg ctaatcgttg aagtgtgctg gcagcttgac gtggaatcat
     1861 gtaaattgaa gtttagaatt tcaatttaca tatattaacc caatatgact gattttgagc
     1921 ctgacatcgg aactttaggc aagccagcct tgcgatgcgc tgccaaagca ccgatcgagc
     1981 cgaagggccg tgtctgccga aataccccgc ttgtcaccac atttgcaacc acatttgcca
     2041 ccgacgattt cgcgccgacg cgaatacgtt ttgggcgcaa caagggctag gaaatagcgc
     2101 aaagaaacac at
//
LOCUS       DATBNL010000165         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_111601, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000165 DATBNL010000000
VERSION     DATBNL010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111601"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VIC30_02820"
     CDS             complement(<1..379)
                     /locus_tag="VIC30_02820"
                     /inference="COORDINATES: protein motif:HMM:NF019977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase N-terminal domain-containing
                     protein"
                     /protein_id="HEY7803353.1"
                     /translation="MTAHLSIEHTTQYAYDHDVILAQHLAYLRLQSTPWQKVLQHALI
                     VTPEPSHLDEQVDAFGNHRSYFSLTQPHRALTVHSTSAVEKTPRYAQFDPSATQPWEL
                     VRNAMVYSLEQPFVPASEFVWPSP"
     gene            complement(376..>2170)
                     /locus_tag="VIC30_02825"
     CDS             complement(376..>2170)
                     /locus_tag="VIC30_02825"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEY7803354.1"
                     /translation="AQARHIAQGAPKFVFLTPGPYSETYFEHAYLARYLGIPLVEGPD
                     LTVRDNQLFLKTVHGLQRIHGLMRRLDDDFCDPLELRADSAIGIAGLLQVVRAGNVVM
                     ANALGTGFLESPAIQGFLPAICENMLGEPLIMPSLHTWWCGETAAWKDISPELHTQVI
                     KPTFANRQATNFEPAIASLLSEHEQQQWRERIARQPDIYTTQTYLPFSQVPTFNGQNI
                     EPKTAMMRFYAMVGADGQWRIMPGGMTRVAALDPHIVSIRSGGSTLDTWVLSDGEVDT
                     FSMLPKRSSVARWETEDELVSSRSAENLFWLGRYTERAEGMVRLAREALSLLSADQST
                     SMSTVNDTITELARRQNLVPYDSPDISSSSLAFARSLINRMREPGNGALPDVVQSMQF
                     AMQAVRDRLPPEHVEIPGKIRALLQREQSEHDLLNVLDKIELPLAALVGFQLDRMTKD
                     LGWRLLAAGRLLERLINQSQIMTQFFDSTAVYTGQGFDSLLTLFDSAITYRTRYQRQQ
                     DIPALMNLIVLDRTNPRAIETTVAGLRDHLSYLPGSKSIVSSLTELKWSTDHNTDLLT
                     EVRTLTQKGFQLSNDISHQFFLHITERRFTS"
BASE COUNT          508 a          534 c          623 g          505 t
ORIGIN      
        1 aaggacttgg ccagacaaac tccgaggccg gcacaaaagg ttgctcaagg gaatagacca
       61 tggcgttacg aaccaactcc cacggttgtg tggcactcgg gtcgaactgt gcgtagcgag
      121 gcgtcttctc gacagcgctg gtgctgtgca cggtgagtgc gcggtgtggt tgagttagcg
      181 agaagtaact gcgatgattt ccaaatgcgt cgacctgctc gtcgagatgg ctcggttcgg
      241 gtgtcacgat tagtgcatgt tgtaaaacct tctgccaagg tgtcgattgc aagcgcaaat
      301 aggccaagtg ctgcgccaga atgacatcat ggtcgtatgc atattgcgtg gtgtgttcga
      361 tgctcaggtg cgcagtcatg aggtgaaccg tcgttccgtg atatgcagaa agaactggtg
      421 actgatatcg tttgataatt gaaatccctt ttgggttagc gttctaactt cggtcaagag
      481 atcggtgttg tgatcagtgg accatttcag ctcagtcaaa gagctgacga tcgatttgct
      541 accaggcaag tacgacaaat ggtcgcgcaa gcccgcaacg gttgtttcga tggcgcgcgg
      601 gtttgtgcgg tccagtacga tcaggttcat gagcgcaggt atgtcttgct gacgttggta
      661 ccgcgtgcga tacgtaatgg cactatcgaa caaagtcaat aatgaatcaa acccttgccc
      721 ggtatagacc gcagttgagt caaagaactg tgtcatgatt tgtgattgat tgatcagacg
      781 ctctagtaaa cgaccggctg ccagcaggcg ccaccccaag tctttggtca tgcgatcaag
      841 ctgaaagcca acgagtgcgg ccaacggaag ctctattttg tccaagacat ttagcaggtc
      901 atgttcggat tgctcgcgtt gcagcagtgc acggattttg ccaggtatct ccacatgctc
      961 cggcggtagg cgatcacgaa ccgcttgcat agcgaattgc atgctttgca ccacatcggg
     1021 cagcgccccg ttaccaggct cacgcatccg attgatcaga gaacgagcga atgcaagcga
     1081 cgaactcgag atatcgggac tgtcatacgg cacgaggttc tgtcgtcgtg ccaactcggt
     1141 gatggtgtcg ttgaccgttg acatgctcgt tgattgatca gctgataaga gcgagagcgc
     1201 ttcgcgcgca agccgaacca tgccctcagc gcgctcggtg tatcgtccca accagaagag
     1261 gttctcagcc gaacgacttg aaaccagttc gtcttcggtc tcccaacgcg ctactgaaga
     1321 acgcttgggc agcatggaaa atgtatcgac ttcaccatcg gataaaaccc aggtatcgag
     1381 cgtgctgcca ccgctgcgaa tagaaacaat atgcggatcg agcgcagcaa cccgtgtcat
     1441 gccgccaggc atgatgcgcc attggccgtc ggcgccgacc atggcataaa aacgcatcat
     1501 ggcagtttta ggttcaatgt tttgaccatt gaaggtgggt acctgagaaa aaggcaggta
     1561 ggtctgcgtt gtgtagatgt caggttgtcg cgcaatgcgt tcacgccact gctgttgttc
     1621 gtgttcggat aacaggctcg cgatagcagg ctcgaaattg gtcgcttgcc gattggcaaa
     1681 ggtgggtttg attacctgcg tgtgcagttc gggactgatg tctttccagg cagcggtttc
     1741 cccacaccac cacgtgtgta atgagggcat gatgagtggt tcaccaagca tgttctcgca
     1801 tatggctggc agaaaaccct gaatggcagg cgactccaaa aagccggttc ccaaagcgtt
     1861 ggccatcacc acgttgccag cgcgcacgac ttgtagcagg ccggcaattc caatggctga
     1921 gtcagcgcgc agttccagcg ggtcacaaaa gtcatcgtca agccgacgca tcaatccgtg
     1981 gatgcgttgc aggccatgaa ccgtttttag aaagagttga ttgtcgcgca ccgttaaatc
     2041 cgggccttca accaacggta tgcccaagta gcgtgctagg taagcatgtt cgaagtatgt
     2101 ttcgctataa gggcctgggg tcaaaaaaac aaacttaggt gcgccttggg caatgtgtct
     2161 ggcttgggct
//
LOCUS       DATBNL010000166         1837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_61766, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000166 DATBNL010000000
VERSION     DATBNL010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61766"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..1054)
                     /locus_tag="VIC30_02830"
     CDS             complement(128..1054)
                     /locus_tag="VIC30_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015914312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEY7803355.1"
                     /translation="MTTTDIPDFVQIVDVAARDGLQNEKQVVPTAVKCSLIERLSNAG
                     VKELETTSYVSPKWVPQMADNHEVMQRLVRHSGVKYAVLVPNMKGFEAAIQDAPDEMV
                     VFAAASEAFSQKNINCSIAQSIERFAPVVQAAKAQGISVRGAMSCTVGCPYEGDVAPE
                     RVAYLAGLLKDIGVDRVDVADTIGVGTPRKVQKAIEATLQHFDIDHISGHFHDTYGQA
                     LANVLASLELGVWNFQASVAGLGGCPYAKGATGNVATEDVVFMLGGMGIETGIDLNAL
                     VQVGQYISQELGRQTGSRVGRALLAKAEVLPT"
     gene            complement(1253..>1837)
                     /locus_tag="VIC30_02835"
     CDS             complement(1253..>1837)
                     /locus_tag="VIC30_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010460976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803356.1"
                     /translation="TPKENFMRNLFAASAAALTVMAAPVLADNHGPNVFNGNITEDEV
                     FNAQKGWCGALVEISAANMKGGQAAAKKVAENVLDSAYAYDNGGVLFKPTLTVAPQTF
                     RSTREGALAYFVGGDPKFPNDSGFALGDWTKCEVLTDGVLLMGNNAISMGQVTVTNKQ
                     GQATTVDKTWGWMKDSQGNLRIVLHHSSLEHTGS"
BASE COUNT          415 a          541 c          451 g          430 t
ORIGIN      
        1 gatcaccgtg agatgaaggt cgagctcggt gactatcgcg gtatcgcctc acccatcaaa
       61 ctcagtcgca cgccagcaag ttatcgctta ccgccgccgg attaatcaac taggtagtca
      121 gtactgccta ggtcggcaac acttctgcct tggccaaaag tgccctaccg acacgcgaac
      181 ccgtctggcg accgagttcc tggctaatgt actgaccgac ttggaccaag gcgttcaaat
      241 cgatgccggt ttcaatgccc atgccgccaa gcataaacac cacatcttct gtggccacgt
      301 tacccgtggc acctttggca taaggacaac caccgaggcc agccaccgac gcctggaaat
      361 tccatacgcc aagctctagt gacgccaata cattggccag cgcttggccg taggtgtcgt
      421 gaaagtgacc cgagatgtgg tcgatatcga agtgctgcaa agtggcttcg atggcttttt
      481 gtactttgcg aggcgtccca acaccgatgg tgtctgccac atcaacccga tcgaccccga
      541 tgtctttaag tagcccagca agataagcca cgcgttctgg cgcgacatca ccctcatagg
      601 ggcaacccac cgtgcaactc atggcaccgc gaacagatat gccttgggct ttcgcggctt
      661 gcaccacggg tgcgaagcgc tcaatgcttt gcgcgatgct gcaattgatg tttttttggc
      721 tgaaggcttc actggccgcg gcaaacacca ccatctcgtc tggggcatct tggatggctg
      781 cctcaaagcc tttcatgttc ggcaccagta ccgcatattt cacgccactg tgtcggacta
      841 agcgctgcat cacctcatgg ttgtcagcca tttgcggcac ccacttgggc gaaacatagc
      901 ttgttgtttc gagttcctta acgcccgcat tgcttaagcg ctcgatcagc gagcacttaa
      961 cggctgttgg aacaacttgc ttttcgtttt gcaggccgtc gcgcgcggcc acgtccacaa
     1021 tctgcacaaa gtctggaata tctgtcgttg tcatgccttg gatacctgtc atgccttcgg
     1081 gtctagccac cagccgtgtt aatcgttact ttgatcatac cggctgcgac aactaatgat
     1141 gtggccacac caaaagcaaa acatccaaag cggcaaccct aaacaaacag atcccgagaa
     1201 ccgccgtttt ctgcagctct cgggatcttg aaacaactat tactacgata gcttagctgc
     1261 cagtgtgctc aagcgatgag tgatgcagca cgatgcgcag attgccttgg ctgtctttca
     1321 tccagcccca ggtcttgtcg accgtggttg cctgaccttg tttgttggtc accgtgacct
     1381 gccccatcga aatggcgttg ttacccatca gcaacacacc atcggtcaac acttcgcact
     1441 tggtccaatc gcccagcgca aatccactat cgttggggaa cttaggatca ccaccgacga
     1501 agtaggccaa agcgccttcg cgggtgctgc gaaatgtctg gggtgcgacg gttaacgttg
     1561 gcttaaacaa cacgccacca ttgtcataag cataggctga atcaagcacg ttctcagcca
     1621 ctttcttggc tgccgcttgg ccgcccttca tgtttgccgc actgatctca actaacgcac
     1681 cgcaccagcc cttttgagcg ttaaagactt cgtcttcagt aatgttgcca ttaaagacat
     1741 tgggaccgtg attgtcggct aacactgggg cagccatcac agttagagcc gcggcagaag
     1801 cggcaaatag gttacgcata aagttctcct tgggggt
//
LOCUS       DATBNL010000167         2402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_41890, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000167 DATBNL010000000
VERSION     DATBNL010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41890"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..1239)
                     /gene="carA"
                     /locus_tag="VIC30_02840"
     CDS             complement(55..1239)
                     /gene="carA"
                     /locus_tag="VIC30_02840"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEY7803357.1"
                     /translation="MLPSLFPGEDHHRYPPAILALADGTVFHGQSIGADGHVIAEIVF
                     NTAMTGYQEILTDPSYSGQLVTLTYPHIGNTGVNVEDAESTQIHAAGLVIRDLSLRVS
                     NFRSTQSLPEYLKAQGVVGITGIDTRKLTRILRDKGAQGACLLVGDDIDKALSLAKSF
                     AGMSGQDLAKTVSIDKQQEWSESVWQLGEGFGKGSDSGKDSGSHAGPHVVAYDFGVKH
                     NILRLMVERGCKVTVVPAQTPADQVLAMNPDGVFLSNGPGDPDPCDYAIEAAKVFMDR
                     KMPLFGICLGHQIMGLAVGAKTIKMKTGHHGSNHPVQDLDTGRVFITAQNHGFAVDAQ
                     SLPAHARVTHVSLFDGTLQGFELTDRPAFCFQGHPEASPGPHDIVVLFDKFMGLMANA
                     TH"
     gene            1304..2263
                     /gene="tal"
                     /locus_tag="VIC30_02845"
     CDS             1304..2263
                     /gene="tal"
                     /locus_tag="VIC30_02845"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEY7803358.1"
                     /translation="MPTLLDALKQTTTVVADTGDFESMKRFAPTDATTNPSLILKAVQ
                     LPAYAGLLEQCASAHQDAPLDEVVDHLLVAFGKEILNIVPGRVSTEVDARLSFDTDAT
                     IERARRIIALYASHGIDKSRVLIKIASTWEGIEAARQLQQEGIACNLTLLFSLVQAVA
                     CADAKVHLISPFVGRIYDWHKQQAASNWDEAANAGEHDPGVQSVSRIYAYYKTHGINT
                     EIMGASFRNTGQILALAGCDLLTISPELLGELSQSEGELTPRLNAEYARAHAPEPISL
                     NQATFRYLLNEDAMASDKLSQGIRAFVADAKKLDTLLSARRGS"
BASE COUNT          576 a          699 c          616 g          511 t
ORIGIN      
        1 ccagcgccaa taatcagaat actttggatg tcggtacgtt tgggcatgag ctactcagtg
       61 cgtcgcattg gccatcaggc ccatgaattt gtcaaacagc acaacgatgt cgtgcgggcc
      121 aggactggct tccgggtgtc cctggaaaca aaaagcaggt cggtcagtca actcaaaccc
      181 ctgcaatgtg ccgtcaaaca acgacacgtg cgtgacacgc gcatgagccg gcaagctctg
      241 tgcatcaacg gcaaacccgt ggttttgtgc ggtgataaac acacgcccag tatccaggtc
      301 ttgcaccggg tggtttgagc catggtggcc ggttttcatt ttgatggttt tggcgccaac
      361 ggccagaccc atgatctggt gaccgaggca aataccgaac agcggcatct tacggtccat
      421 aaataccttg gccgcctcaa tggcgtaatc acacggatca gggtcgcctg ggccgttaga
      481 taaaaacacg ccgtcagggt tcatcgccag aacttggtcc gccggtgtct gtgctggtac
      541 cacggtgacc ttgcagcctc gctcgaccat caaacgcaga atgttgtgct taaccccaaa
      601 gtcataggca accacatgcg gacctgcatg tgagcctgaa tccttgcctg aatctgaacc
      661 cttgccaaag ccctcgccta gctgccagac cgattcgctc cactcctgtt gcttgtcgat
      721 ggagacggtc ttagccaagt cctgacctga catgccagca aacgatttgg ccaacgacaa
      781 tgctttgtcg atgtcatcac ctaccaacaa gcaggcacct tgagcaccct tgtcacgcaa
      841 gatacgcgtc agcttacggg tatcgatgcc ggtaatgccc accacgcctt gcgctttcag
      901 gtactctggc aatgattgtg ttgacctaaa attcgagaca cgcaatgaca agtcgcgtat
      961 gacgagacct gctgcatgga tttgggttga ttcagcatcc tcaacgttca cgccagtgtt
     1021 gccgatgtgc ggataggtca gtgtcacgag ttgaccgcta taactgggat ctgtcaggat
     1081 ttcctgatag ccggtcatgg cggtattaaa gactatttcg gcaattacat gaccgtcggc
     1141 gccgatggac tgcccgtgaa acacggttcc gtctgccaag gctagaattg cagggggata
     1201 ccgatgatgg tcttccccag gaaagagaga tggcagcacg acagtcgaca acacacgtat
     1261 ccccggatta aaaatcaaca ttcaaacctt caaattataa cctatgccta ctttgctcga
     1321 tgccctcaaa caaaccacga ccgtcgtggc cgacaccggc gactttgagt ccatgaagcg
     1381 ctttgcgcca acggacgcca ccaccaatcc ttcgctgatt cttaaagccg ttcagttgcc
     1441 cgcctacgcc ggtctgctcg aacaatgcgc cagtgcccac caagacgccc ctttggatga
     1501 ggtggtcgac catttgctcg tggcgtttgg caaagaaatc ctaaacatcg tcccggggcg
     1561 cgtgtccacc gaggtcgacg cccggctgtc gtttgacaca gacgccacga ttgagcgggc
     1621 tcgacgcatc attgcccttt acgccagtca cggcatcgac aagtcccgtg tgctcatcaa
     1681 gatcgcatcg acctgggaag gcattgaagc ggcccgtcaa ttgcagcaag aaggcattgc
     1741 ctgcaacctg acgctgctgt ttagcttggt gcaagccgtg gcttgcgccg atgccaaggt
     1801 gcatctgata tctccctttg tcgggcgcat ttatgactgg cacaagcaac aagccgctag
     1861 caactgggac gaagccgcca acgccggcga acacgacccg ggtgtgcaat cggtctcgcg
     1921 tatctacgcc tactacaaaa cccacggcat caacaccgag atcatgggtg cgagttttag
     1981 gaacacggga caaattctgg cgctagccgg ttgtgactta ttgacgatca gccctgaatt
     2041 gcttggcgaa ctgagccaat cagaaggtga actgacacca aggctaaacg ctgaatacgc
     2101 ccgtgcgcat gcaccagagc cgatctctct gaaccaagca acgtttcgat acctgctcaa
     2161 cgaagatgcc atggcaagcg acaaactatc gcagggcatt cgcgcctttg tcgcagacgc
     2221 taaaaaactc gacacgctcc tgtctgcgcg tcgtgggtca tgatcgagac aatgaccgca
     2281 gacaataacc acagtgatgg cacccaaagc ccccctcggc taatcattga aggccaggtc
     2341 gcgattattg aattttcacg cccggcgctg gcaaaccgct taagtccagc tgacctcgac
     2401 gt
//
LOCUS       DATBNL010000168         2979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_81828, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000168 DATBNL010000000
VERSION     DATBNL010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81828"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..1230)
                     /locus_tag="VIC30_02850"
     CDS             complement(52..1230)
                     /locus_tag="VIC30_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY7803359.1"
                     /translation="MTSALSPIYGRLPVAFERGEGVWLWDTEGKRYLDGLAGIGVSCL
                     GHGHPALVKAIADQAAKVIHTSNIYNIPLQAELAERITAISGMSEVFFVNSGAEANEG
                     AIKLARLYGHIKGVKLPTIITMDSAWHGRTLGTLAATGSEKARQGFGPLPDGFLQVTY
                     NSLEAVEQAGKSCPDVVAILVEVLQGEGGIRPSDLAYLKALRQLCDDNNWLLMIDEVQ
                     SGIGRTGKWLAHQWAEVLPDVVTLAKGLGGGVPIGAVAARGPAAGLLKPGHHGTTFGG
                     SPLVCAAALAVLNTLEQDDLLAHASNVGQAMFDRLHAALDGVDGVSDVRGRGLMIGIE
                     LNRPCPDLVRQAMEAGLLINVTRDKAVRLLPPLVITQDEAFELVDGIVALIKQFLQSK
                     "
     gene            1374..1709
                     /locus_tag="VIC30_02855"
     CDS             1374..1709
                     /locus_tag="VIC30_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3579 domain-containing protein"
                     /protein_id="HEY7803360.1"
                     /translation="MSDSPIYFVILGQTLQGQRFRPSDWAERLAGVMAPYRPPGAGAG
                     PLTYSPYVVPRVIDGVKCVVVDERLRDIEPLAWKFVHDFATDNDLQTLKDIQDVATGV
                     TNALPSKKA"
     gene            complement(1658..2617)
                     /locus_tag="VIC30_02860"
     CDS             complement(1658..2617)
                     /locus_tag="VIC30_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEY7803361.1"
                     /translation="MVSKPKILQVGSLGGSPGADQYLNEHYDVIALWQSDDVAQTLRD
                     AADVEVVVTSAMHGCKAEVIEALPKLKLICNWGVGYDTIDIDAAAKRSIAVTNTPEVL
                     NDCVADEAWGLMIACARHIPLGDRFVRENRWENHDGVMPLGTRVSGKKLGIIGLGRIG
                     MAIAKRGHGFDMQVAYHNRSARTDVPYTYMDTLTGLAQWADFLVVATVGGASTKKLVD
                     REVLAALGPNGYIINIARGPVIDEAAMVQLLQSGELGGAGLDVFENEPAVPNELKQMD
                     NVVLMPHLGSATRETRQAMFEVVTANLQAFFDGKALVTPVATS"
BASE COUNT          688 a          822 c          803 g          666 t
ORIGIN      
        1 tggtgtcggt tgcatcagtc atggggtgta tcctgtttgc gtatgtaagg tctacttgct
       61 ttgcaagaac tgcttgatta gggcaacgat gccatcaacc agttcgaaag cttcgtcttg
      121 tgtaatcacc agcggtggca agaggcgcac cgccttgtca cgtgtcacgt taatcagtag
      181 ccctgcttcc atggcctggc gcaccaggtc aggacagggg cggttgagtt cgatgccgat
      241 catcaggcct cggccgcgaa catctgatac accatcaacg ccgtccagtg cagcatgtag
      301 ccgatcgaac attgcttgcc cgacattact ggcgtgtgcc agcagatcgt cttgctctaa
      361 ggtgttgagc accgcaagtg cagctgcaca caccaagggc gaaccaccaa aggtggtgcc
      421 gtgatgacca ggttttaata gacctgcggc tgggccgcgg gcggcgactg cgccaatcgg
      481 tacaccgcca cccaagcctt tggccaatgt cacaacgtct ggcaacacct cggcccactg
      541 atgggcaagc catttgccag tgcgaccgat gcccgattgc acttcatcaa tcatgagtag
      601 ccaattgttg tcatcgcaca attgacgtaa cgcttttagg taagcgaggt cagaaggccg
      661 gataccgcct tcaccttgca ggacttccac caaaatagcg accacgtccg ggcatgactt
      721 gccggcttgt tcaacagcct caaggctgtt gtaggttacc tgcagaaaac cgtctggtaa
      781 cggcccaaac ccttgccgcg ctttttcgct gccggtggca gccagtgtgc ctagcgtgcg
      841 gccatgccag gccgagtcca tggtgatgat ggtcggcagc ttcacgcctt tgatgtgccc
      901 gtaaagtcgc gccagtttga tggcgccttc gttggcttca gcaccactgt tcacaaaaaa
      961 tacctctgac atgcccgaga tggccgtgat gcgctcggcg agctcggctt gcaaagggat
     1021 gttgtagata ttggaagtgt ggatgacttt ggcagcttga tcggcaatgg ctttaacaag
     1081 cgccggatgc ccgtgaccaa gacatgacac gccgatgccc gccaatccgt ctagatagcg
     1141 tttgccctct gtgtcccaca accacacacc ttcaccacgt tcaaacgcaa cgggcagtcg
     1201 accataaata ggggataggg cagaagtcat gacggatgtc tctatgtgtg ggcagtgggt
     1261 aagccaaagc aactagcatg atgcaatggg taaaccctaa tcatatacaa tcgcaaccat
     1321 gcctgtgcga atcggcactg tactgggtgt cgattctccg ttgagacgtc tgaatgagtg
     1381 attccccgat atatttcgtc atcctaggac aaaccctgca gggtcagcgg tttcgtccaa
     1441 gcgattgggc cgagcgccta gccggcgtga tggcgccgta ccgtccgccg ggcgcaggcg
     1501 ctgggccact gacgtattca ccgtacgttg tgccccgcgt tatcgatggg gtgaaatgcg
     1561 tggttgtcga tgagcgtttg cgtgatattg agccactggc gtggaaattc gttcatgact
     1621 ttgccactga caatgatttg caaacgctaa aagacattca ggatgtggcc actggggtta
     1681 ccaacgcctt accatcaaag aaagcctgaa gattagcggt caccacctca aacatcgctt
     1741 ggcgtgtttc tcgggtggcg ctacccaaat gaggcatgag aaccacgttg tccatttgct
     1801 ttaactcgtt gggcaccgct ggctcattct caaatacatc gaggcctgca ccaccgagtt
     1861 caccgctttg cagcaactgc accatcgctg cttcgtcaat gacagggccg cgagcgatgt
     1921 tgatgatgta gccattgggg ccaagcgcgg ctaacacctc gcggtcaacg agctttttag
     1981 tgctcgcgcc gccgaccgtc gccaccacta aaaaatcagc ccattgggcc agcccagtca
     2041 gtgtgtccat ataggtatat ggcacatcgg tgcgtgctga gcggttgtga tacgccactt
     2101 gcatgtcaaa cccatgcccg cgcttggcaa tcgccatacc aatgcgaccc aagccaataa
     2161 tgccgagctt cttgccgctt acgcgagtgc ccaagggcat cacgccgtcg tggttttccc
     2221 atcggttttc gcgcacaaac cggtcgccaa gtggaatgtg gcgtgcgcac gcaatcatca
     2281 gcccccaagc ttcgtctgcc acgcaatcgt tgagaacctc tggcgtattg gtcacagcga
     2341 tagagcgctt ggccgcagca tcaatgtcga tggtgtcgta acccacaccc cagttacaaa
     2401 tgagctttag tttgggcagc gcctcgatga cctcggcttt acaaccgtgc atggcagatg
     2461 taaccacaac ctcaacgtca gcggcatcac gcagtgtttg tgccacatcg tcagactgcc
     2521 atagggcgat gacgtcatag tgttcattga ggtactgatc agcaccaggc gacccaccaa
     2581 gggatccaac ttgcaggatt ttaggcttgc tcacgatagg aagctccaac ggcattcaga
     2641 agtcaatcca cgatgctagg ctcacgcgca ggtttaagca agtggggcaa actcgtgtgg
     2701 cggatacgtc tggcgggtgc gtctaaggtg aacagcgagc agatgccatg tatggatagc
     2761 gatgcaagcc gttgtagtgg cggttttact tagctgttgt gcttcggcct atcgcctagt
     2821 catcaatgcg aaaaaacaca aaaagagcac aaaaaaagag cgcaaaaaaa cagacctaaa
     2881 taggtctgtt tttaaggtag ccggaaatca gctgtagcca ctactcgcca cgagagacag
     2941 cgttaatgac agaattaacg ttcgctattt ctgctgagc
//
LOCUS       DATBNL010000169         2765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161530, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000169 DATBNL010000000
VERSION     DATBNL010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161530"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /gene="ybeY"
                     /locus_tag="VIC30_02865"
     CDS             <1..443
                     /gene="ybeY"
                     /locus_tag="VIC30_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEY7803362.1"
                     /translation="QYGIDDEHLARWRIRRWVLGALQAADTAGIDQLTLTIRLVGQRE
                     GKMLNQTYRHKDYATNVLTFEYDRTPGQGRCIMADIVICTPVLKAEAKAQHKTYLHHA
                     AHLVVHGTLHALGYDHLEAEQATAMESIETRVLARWAIADPYAS"
     gene            550..1434
                     /locus_tag="VIC30_02870"
     CDS             550..1434
                     /locus_tag="VIC30_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEY7803363.1"
                     /translation="MPEPYPSEPGQAPGDKSKSKKSLVDRILSLVRGEPEDREGIFTV
                     LEAARERELIDSNAYTMLKGALAVSDQTAADIMVPRARMDLLDVNEPLASLLPKIVEM
                     AHSRFPVYEDSPDNLIGIFMTKDLLRHMLNPTLTLRDLVRPAVFIPETKRVNVLLQEF
                     RSHRNHIAIVIDEHGGITGLVTLEDVLEQIVGAIEDEYDDSEQTIFPDGHNTWRILAT
                     TELEHISELLHCEIPEGDYDTLGGWLAHELGRIPRRGDRHALEDLQFEVLRADSRRAI
                     WVRARRLPHLKADPTALA"
     gene            1443..2765
                     /gene="lnt"
                     /locus_tag="VIC30_02875"
                     /pseudo
     CDS             1443..2765
                     /gene="lnt"
                     /locus_tag="VIC30_02875"
                     /inference="COORDINATES: protein motif:HMM:NF039484.3"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
BASE COUNT          596 a          805 c          766 g          598 t
ORIGIN      
        1 tgcagtacgg catcgacgac gaacacttag cgcgctggcg cattcggcgc tgggtcctag
       61 gtgccttgca ggcagctgac accgcaggca ttgatcagct cacgctaacc atccgcttgg
      121 tcgggcagcg cgaaggcaaa atgctcaacc agacctaccg ccacaaagac tatgccacca
      181 acgtactgac ctttgagtac gaccgcaccc caggtcaagg gcggtgcatc atggctgata
      241 ttgtgatttg tacgccggtt ttaaaggcag aggcaaaagc acaacacaag acctacctgc
      301 accacgccgc ccacctggtc gtccacggca cgctgcatgc cctaggctat gaccacctcg
      361 aggccgagca agccaccgcc atggagtcca tagaaacccg tgtgctggcg cgctgggcca
      421 tagcggaccc ctatgccagc tagatcaacg tccgactggc aaaaaatgtc ggtatgatca
      481 agcccaaggc gctcgattgt catgcgcttt aggttatcct aagcctatcg aaacttgatt
      541 gcatccaaga tgccagaacc ataccctagc gagcctggtc aagcgccagg cgacaaatcc
      601 aaatcaaaaa aatcccttgt tgaccggatc ctttcgttgg ttcgcggtga acccgaagac
      661 cgtgagggca tcttcacggt gctcgaagcg gcgcgagaac gcgagttaat cgatagcaac
      721 gcatacacca tgctcaaagg ggccttggcg gtttcagacc agacagccgc tgacatcatg
      781 gtgccgcgag cgcgcatgga tctgctcgat gtcaatgagc ctttagcaag cctgttgccc
      841 aagatcgttg aaatggcgca ctcacgcttt cctgtctatg aagattcccc agacaatctg
      901 atcggaattt ttatgactaa ggacctattg cgtcacatgc tcaaccccac cttgacactg
      961 cgtgacttgg tgcgcccagc agtttttatc ccggaaacca agcgggtgaa cgtgttgctg
     1021 caagagtttc gcagccaccg caaccatatt gcaatcgtta ttgacgagca cggcggcatc
     1081 acgggactcg tcacacttga agacgtgctc gagcaaatcg tgggtgccat tgaggatgag
     1141 tacgacgaca gcgagcaaac catctttcct gacggtcaca acacgtggcg cattctggcc
     1201 accacggagc tcgagcacat cagtgaactg cttcattgcg agattcctga aggtgactac
     1261 gacacgctcg gggggtggct ggcgcacgag cttggccgca tcccgcgtcg tggcgaccgc
     1321 catgcgcttg aagacctgca attcgaggtt ctaagagcgg attcgcgccg cgcgatctgg
     1381 gtacgtgcgc ggcgcttgcc gcatctgaaa gctgacccca ccgcgctggc ttaacccgaa
     1441 tcatgcgcgt gcgcttgatc ctttggccag cgttctatgg tgcattgttc gcactgacct
     1501 ttgcaccact gccgctgcct acttggtcac tggcctgggt gcaactggtg gtgctggcta
     1561 ttgccgcaca cggggctttt agtcgaacac ccaaagatgc cgcaatcacg ggtctcatgt
     1621 ttggactcgg cacctttgtc gtcgggcttt attggctcac catcagcatg cacgtctatg
     1681 gtcagatggc cttgccactg gcgtggctgg cgttactgct gtttagcatg tacttagcac
     1741 tttagccggc gctggcgttt gggctcactg cttggttgct aagtggtacc aaccggatac
     1801 acccctttaa cctgctgtgg atggccacgg tctgggcgag tgcctggaca ctgactgaga
     1861 tgctacgcgg cgtggttttt accggctttc catggttggg cacggcctat gggcagactg
     1921 acagctggat ctcaggttgg tcggtgctcg caggagcagc gggtacgaca tggatcacag
     1981 catggatagc cggtgctgtg gccgccacgc tggctgctga aaccagacaa cgtgacagca
     2041 ccgtcacgcc caagcgtgcc tttgccgtgg cgtgcgccat cgtcttggcc tttattggcg
     2101 ccttgctgca gcaaacgagc ttcactgagg ccacgggtgc gccgctgaca gctcgactcg
     2161 tgcaaggcag tgtcgatcaa ggcatgaagt tcgatgcgcg acgctttgaa caggctcatg
     2221 cacaccacac ggacttggcc acccatcaaa gccccaaagc cggcgacacg ccccaccctg
     2281 atctgatctt gctgcctgag accatcatcg cgcgcttatc caatcaggtg cctgctggcc
     2341 actggcaaga ctggatcgat atagcgaccg aacaaggcaa tacgattctg cttggcgcac
     2401 cgttgtatgg tcctcagccg gggcgttata ccaacagtgt cattgccatc gatgccgaac
     2461 aatcgcccgc gcaactcgcg caaggcatgg ccaaccaacg ctacgacaag caacacctag
     2521 tgccatttgg tgagttcgtg cccaccggat ttcgttggtt tattgacctg atgcaaatcc
     2581 cgctcggtga ctttaatgcc gggagcgccg atcaaccacc gtttgaaatt ggtgtgcaaa
     2641 aggtagcgcc caatatttgc tacgaagaca tttttggtgc tgaactgctg ccagcggtca
     2701 gacaaggtgc cacgattttg gcgaatttca gtaacttggg gtggtttggc gacagttggg
     2761 ctttg
//
LOCUS       DATBNL010000170         1822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_141437, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000170 DATBNL010000000
VERSION     DATBNL010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141437"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VIC30_02880"
     CDS             complement(<1..785)
                     /locus_tag="VIC30_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012348606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY7803364.1"
                     /translation="MWIEWTVGAGLTAWLTPKAVRRAQLSRAKHRSLAGHSRMAKRLA
                     KLLPEYHYSEAEFFAADGAPDEVQTQRRQGLTALSQSFMQSPQTIALSRQAREQISDM
                     QLTGRNRVPFQFSPVIQQYLPIGSFWQSSSGIRLKDLDDREFIDLTGSFGVNVMGLDF
                     YKETTRKGLEQSEQLGPLLGGYLPCVATNASRLLQISGMDEVSFHMSGTEAVMQAVRL
                     ARYHTGRRKIVRFAGAYHGWWDDVQPGPGNPMPPGHVYTLADL"
     gene            845..1783
                     /gene="asd"
                     /locus_tag="VIC30_02885"
     CDS             845..1783
                     /gene="asd"
                     /locus_tag="VIC30_02885"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012348605.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HEY7803365.1"
                     /translation="MNPNQNLRKRLLDQEQLNFWLTNRIPRAWLTRSMGRISKIRHPW
                     VAKLGIGIWKRLSDLDLSEAQQTDFPSIHDCFVRELKPGLRPFEADPQTLCSPCDAIV
                     GARGIVEKGQLLQAKGMVYSLVDFLQSRDDANACEGYHYLTLRLMSSMYHHFHAPHDV
                     TVKHLRYIHGDVFNVNPPTLKRINGLFAKNERAVIQATLDQTGETCWLVPVAAVLVAS
                     MRFTFSDIHLHLDYRGPTETVMNTTLTKGTRMGWFEHGSTIIVLMPPTWDWVGPETGQ
                     RTGHSTGERIKTGQALFKLNPTRMQTIDPTTDPTTD"
BASE COUNT          446 a          547 c          450 g          379 t
ORIGIN      
        1 ctcaagtcgg ccaacgtata cacatgtcca gggggcatgg ggttaccggg gcctggctgc
       61 acatcatccc accagccatg ataagcacca gcaaaacgca cgatcttacg tctgccggtg
      121 tggtagcgcg ctagacgtac ggcctgcatc acggcttcgg tacccgacat gtgaaacgac
      181 acttcatcca tgccactgat ttgcagtaaa cggctggcgt tggtggccac gcacggtaga
      241 taaccgccga gcaaaggtcc gagttgttca ctttgttcaa gacccttgcg tgtggtctct
      301 ttgtagaaat caagccccat gacattgacg ccgaacgaac ccgtcagatc aataaactcc
      361 cggtcgtcta gatcttttaa acggatgccg ctcgatgatt gccagaatga cccgatcggc
      421 aaatactgct gaatcaccgg tgagaactga aacggcaccc ggttgcggcc tgtgagctgc
      481 atgtccgaga tctgctcgcg tgcctgacga ctcaaggcaa tcgtctgtgg actttgcata
      541 aacgactggc tcagcgccgt gaggccctga cgcctttgcg tttgcacttc atcgggcgca
      601 ccatcggccg caaagaactc tgcctcgctg tagtggtatt ccggcaacaa cttcgcgagc
      661 cgtttggcca tgcgcgaatg accagcaagc gagcgatgct tggcccgtga aagttgcgca
      721 cgcctaactg ccttgggcgt gagccacgcc gttaaaccgg cacctaccgt ccattcaatc
      781 cacatgtgtc acacaccgtt caaattagtg tgtcagtctt gtaactgaat agtttgacaa
      841 tcacatgaat ccaaaccaga acctgcgcaa gcgcctgctc gaccaagagc aactcaactt
      901 ttggttgacc aaccgcattc ctcgcgcctg gctcacccgc agcatgggtc gtatcagcaa
      961 aatccgccac ccctgggttg ccaaactcgg catcggcatc tggaagcgac tcagtgacct
     1021 ggacttaagc gaagcgcaac aaactgactt tcccagcatt cacgactgct ttgtacgcga
     1081 actcaaaccg ggattaagac cctttgaggc tgacccccag acgctgtgca gcccgtgtga
     1141 tgccatcgtc ggcgccagag gtatcgtcga aaaaggccag ttactacaag ccaagggcat
     1201 ggtgtattca ctggtggact ttctgcaaag ccgcgacgat gccaacgcct gtgaaggcta
     1261 ccactaccta accctgcgtt tgatgtcatc gatgtatcac catttccacg caccacatga
     1321 tgtcaccgtc aaacacctgc gttacatcca tggtgacgtc tttaacgtca acccgccaac
     1381 actcaagcgc atcaacggac tgttcgccaa aaacgaacgc gcggtgattc aagccaccct
     1441 agaccagacc ggtgaaacct gctggctcgt gcccgtggca gctgtgctag ttgcaagcat
     1501 gcgattcacc ttttctgaca tacacctgca tctggactat cgtggcccga ccgagacggt
     1561 catgaacaca acgctcacca aaggcacccg catggggtgg tttgagcatg gctcgacgat
     1621 tattgtgttg atgccaccga cttgggactg ggttggccca gaaactggcc agcgcacagg
     1681 ccacagcaca ggcgagcgca tcaaaaccgg tcaagcattg tttaagctca acccaacacg
     1741 catgcaaaca atcgatccaa ccacagatcc aacaacagat tgacagtttg actctacccc
     1801 catagagtgg ggtcatgtta aa
//
LOCUS       DATBNL010000171         1896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_61836, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000171 DATBNL010000000
VERSION     DATBNL010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61836"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(308..856)
                     /locus_tag="VIC30_02890"
     CDS             complement(308..856)
                     /locus_tag="VIC30_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HEY7803366.1"
                     /translation="MALGATIYKVELNIADSDRHYYGSHVLTVARHPSETTERMLVRL
                     VAFALNAHDDLAFTKGLSSADEPDIWLKDLTGAVDLWIEVGQPTESRLLKGCSRANQV
                     IVYCHNGHASKLWWDSAHKKLARAKNLKVVYLPIEPIRELENDINRNMTLHVNIQEQE
                     VFISNDSRQVSLTPDVWHDSSG"
     gene            complement(931..>1896)
                     /locus_tag="VIC30_02895"
     CDS             complement(931..>1896)
                     /locus_tag="VIC30_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEY7803367.1"
                     /translation="LTDAGVKEPLTQVVALTANPQAAQAFGIEPERIFEFWDWVGGRY
                     SIWSTIGLPIALGLGWKAFEDLLAGARVMDEHFQQAPIEDNAPVQLALNMVANTSVLG
                     YTSEVICPYDARLTDFVPWLQQLQMESLGKTVDQQGNPIDVSISPAVWGMPGTDSQHT
                     FFQWLHQSQRGAPVDFIFCLEPEHQLIEHHHQLLANCLAQRAALWRGKSEQASFDELS
                     QSHDETHAQWLAQHCVHPGARPSTLIVLPKLDAHRLGTLLALYEHKVFVAGLLWGLNP
                     FDQWGVEFGKRLAHQLLQNDPEQAKAFDVSTQHWLSAIWRASDQP"
BASE COUNT          399 a          477 c          524 g          496 t
ORIGIN      
        1 ttatggggac attggaaaaa tcgccttgca tcgcacaaac tttctgttat tcttttgttg
       61 tgcgtcgctg aaacgttggt gtaagtaata tccctagatg attttgggct gttagtgaac
      121 ccagcgcttg cgcaaggccg aaagcgactc ggcaagattg tctcctccac cctcctcctt
      181 tggtggattt ggcccgatac cgctaggtat cgggcctttt ttttggggtg gtggggggcg
      241 ctgcttttct gtgtcgcttt tctatgcggc tttatgcttt ttctcgtttt ttgcgctgag
      301 cccttaatca gccactcgag tcatgccaaa catcgggcgt caaactgact tgtcggctgt
      361 cattcgatat gaagacctct tgttcctgaa tattgacatg caaggtcatg ttgcgattga
      421 tgtcgttttc caactcacgg attggctcaa tgggtaggta gacgactttg aggtttttag
      481 cgcgtgccaa cttcttgtgg gcactatccc accagagttt gctggcatgc ccgttgtggc
      541 agtacacgat gacttggttg gctcgcgagc accccttgag caggcggctt tcagtcggtt
      601 gacccacttc gatccaaaga tcaacggcgc cggttaagtc tttgagccaa atgtcaggtt
      661 catcggctga actaagcccc ttggtaaaag ccaagtcgtc atgtgcattt aatgcaaatg
      721 ccactagacg aaccaacatg cgttcggtgg tctcagaagg gtggcgggcg acggttagta
      781 catgactgcc gtagtagtgc cgatcactgt ctgcaatgtt tagttctact ttgtagattg
      841 ttgcgcctag ggccatcgtt tgtctttggg tttcgtcagt attggttcga gcatttagga
      901 tacgcgcaag cttattggca ctttacggat ctaaggctga tcgctcgccc gccagatcgc
      961 agacagccaa tgctgggttg agacatcgaa agccttggct tgttcggggt cgttttgtag
     1021 gagttggtgc gccaagcgct taccgaactc tacgccccac tgatcgaacg gatttagacc
     1081 ccacaaaaga cctgccacga atactttgtg ttcgtagagg gccagtaacg tgcctagacg
     1141 gtgcgcatcg agcttgggca atacgataag cgtcgatggg cgggcaccgg gatgcacgca
     1201 gtgctgcgcg agccattgtg catgcgtctc atcgtggctt tggctgagtt cgtcgaacga
     1261 cgcttgctcg gatttgccgc gccacaaggc cgcgcgctgc gccagacagt tagcgagtag
     1321 ttggtggtgg tgttcaatta actgatgttc tggttccagg caaaatataa agtcaaccgg
     1381 cgcgccgcgc tggctttgat gcagccactg gaaaaacgtg tgctgactgt cggtgccagg
     1441 catgccccag acggctgggc taatagacac gtcaataggg ttgccttgct ggtcaacggt
     1501 cttgcccagc gactccatct gcaattgttg caaccatggc acaaaatctg tgagccgtgc
     1561 gtcataaggg cagatgactt cggaggtgta acccaacacg ctggtgttgg ccaccatgtt
     1621 cagtgccagt tgaacagggg cattgtcttc aatgggtgct tgctggaaat gctcatccat
     1681 gacgcgagcg cctgcgagca aatcttcaaa cgctttccaa ccgagcccga gcgcaatggg
     1741 taaaccaatg gttgaccaaa ttgagtagcg accacccacc caatcccaaa actcaaagat
     1801 gcgttcaggc tcaataccaa atgcttgcgc ggcctgcggg ttggcagtca aagcaaccac
     1861 ttgggttagc ggttccttaa cgccggcatc tgtcag
//
LOCUS       DATBNL010000172         2180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_61837, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000172 DATBNL010000000
VERSION     DATBNL010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61837"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VIC30_02900"
     CDS             <1..180
                     /locus_tag="VIC30_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803368.1"
                     /translation="RSTQIIKDREAALVQEFKDKGINIVEVDRQSFVDGVLQNVTPES
                     LGYNREDYDRITALK"
     gene            482..1084
                     /locus_tag="VIC30_02905"
     CDS             482..1084
                     /locus_tag="VIC30_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009552281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY7803369.1"
                     /translation="MVSDNSVFEQEEKTTTTTAHVNSTANQSASSLVAIDQGVDLSDY
                     RWEDWISVVFFWVLGFVVFYQFFTRYALDNSAAWTEEIARYLLIIVTFVGGAMATRKN
                     THIHLEFLYRFLPAKVGRVLSTLVDIVRVGFLVYATYLSALLVPRMQFMNMTVVDFPM
                     SYVYGMVTFGFAMMSYRAIMLAIEHWRQGYSTLERPEEAY"
     gene            1196..>2180
                     /locus_tag="VIC30_02910"
     CDS             1196..>2180
                     /locus_tag="VIC30_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013539270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY7803370.1"
                     /translation="MNSLLFGTFLGGMLTGVPIAIAMAMASLVYISVTGTIPGFAVIH
                     RMVGGVDSFPLLAVPFFIYAGNLMNSAGITNRIFDFAMSLVGWMKGGLGHVNVVGSVV
                     FSGMSGTAVADAGGLGTIEIKAMKDNGYPAEFAVGVTAASSTIGPIIPPSLPIVIYGV
                     QANASIGKLFAAGFVPGFLMAVFMMAMVAYFAHKHKYGSDAVFAWSRFGKGMFELVVT
                     GIFAITLYHVWQSEELGGFAKFGAPLIAALVIDKVFKLEAFMALLTPVILIGGMLAGM
                     FTPTEAAVAGVAWALFLGFVWYRTLNIKMFTKISFETVETTASVLFIVASAS"
BASE COUNT          470 a          507 c          616 g          587 t
ORIGIN      
        1 cgcagcaccc agatcatcaa agatcgcgag gctgccttgg tgcaagagtt caaggataaa
       61 ggcatcaaca tcgttgaagt cgatcgtcaa tcttttgtcg atggtgtgtt gcagaacgtg
      121 accccagagt cactgggcta caaccgtgaa gactatgacc gcatcacggc actgaagtga
      181 tcgccttgga gtaagcgtca tagacgttag ttgtacacct gaaccggtgc accgtttagt
      241 gtgagcagtg caccagttca ggggataaat gcgggggaca agcgcgcagg ataagtgaaa
      301 gacggtttgg ttgggcaacc aacagtcacc ctcgggttgt tctgtctaac tcatgggtta
      361 ctaactgatg cacgcaccga aacagcacag acagaaaacc ttatcttcgt ccatgcagat
      421 atcgcagaca catctacggc acacccaagc caaatgaatc aactggcaag gcagcacaac
      481 catggtttcg gataattcag tgtttgaaca agaagaaaaa acgacaacga ccacagcgca
      541 cgtaaactcg acagcgaacc agagcgcgag ttcgcttgtg gcgatcgacc aaggggtcga
      601 tctcagtgac taccgctggg aggactggat ctcagtggtg tttttttggg tgctggggtt
      661 tgtagtgttc tatcagttct ttacccgcta tgcactagac aactcagcgg cctggaccga
      721 agagattgca aggtatttgt tgatcatcgt gacatttgtt ggcggcgcaa tggccacgcg
      781 taaaaacacg catattcatc ttgagtttct ctaccggttt ttacccgcca aagtggggag
      841 ggtgctttca accctagtcg atattgtgag ggtgggattc ttggtttacg ccacttactt
      901 gtcagcgctc ttggtgccac ggatgcagtt tatgaacatg acggtggtgg atttcccgat
      961 gagttacgtc tacggcatgg ttacgtttgg gtttgcgatg atgtcgtatc gggccattat
     1021 gttggctatt gagcactggc gccagggcta cagcacgctt gagcgacccg aagaggcgta
     1081 ttgatggagt aacgccctga tgcagtgacg atagttgcac taagtagcgc accacgcact
     1141 gcacaggcaa cttcatgtcg gccgccatta aatttcacac tgagttgttg gttttatgaa
     1201 cagtctttta ttcggtacgt ttctaggggg gatgctcacg ggcgttccaa tagcgattgc
     1261 catggccatg gcatcgcttg tctatatctc ggtgactggc acgattcccg gttttgcggt
     1321 gattcaccgc atggtcggtg gtgtcgattc tttccccttg ttagcagtgc ctttttttat
     1381 ctatgccggc aacctgatga attcagccgg cattaccaac cggatcttcg attttgcgat
     1441 gtcgcttgtc ggttggatga aaggtggctt gggtcatgtc aatgtggttg gctctgtggt
     1501 gttttctggg atgtcaggca cggctgtggc tgatgccggt ggcttgggca ccatcgaaat
     1561 caaagccatg aaagacaatg gctacccggc cgagtttgcg gtgggcgtga ctgcggcttc
     1621 atcgaccatc ggtcccatca tcccgccgtc actaccgatt gtgatctatg gcgttcaagc
     1681 caacgcctcg attggcaaac tatttgctgc gggctttgtg cccgggtttc tgatggctgt
     1741 gttcatgatg gccatggtgg cttattttgc gcataaacat aagtacggtt cagatgcggt
     1801 gtttgcctgg tcgcgttttg gcaagggcat gtttgagctc gtggtcactg gcatctttgc
     1861 cattacgctc tatcacgttt ggcaaagcga agaacttgga ggctttgcga agtttggcgc
     1921 accgctgatt gccgcgttgg tgattgacaa ggtctttaag cttgaagcct tcatggcgtt
     1981 attgacgcct gtgattttga ttggtgggat gttggcaggt atgtttacgc ccaccgaggc
     2041 tgcggtggca ggcgttgcct gggcgctttt tttagggttc gtgtggtatc gcacactgaa
     2101 catcaaaatg ttcaccaaaa tcagctttga gaccgttgag acaaccgcct cggtgctctt
     2161 tatcgtggca tcggcctcga
//
LOCUS       DATBNL010000173         1600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_81915, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000173 DATBNL010000000
VERSION     DATBNL010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81915"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1380)
                     /locus_tag="VIC30_02915"
     CDS             complement(<1..1380)
                     /locus_tag="VIC30_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007749167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEY7803371.1"
                     /translation="MKTYNHFINGEYVAPVSNQWIDSMDPYQGQAWAKIPKGCEKDAD
                     RAVQAAKYALEEGPWATMKGGERARLMLRLADLVEQNAQELAQVEVKDNGKLFAEMKG
                     QLMYHPNWWRYFAGLADKIEGRVVPIDKPEHFAFTRREPIGVVAAITAWNSPLLFVAW
                     KCAAALAAGCTVVVKPSEYASASTLEFAKLTREAGFPDGVFNVATGLGHEVGSALVDH
                     PDVAKITFTGSDSTGARIYSQAAKSMKRVSLELGGKSPNIVFDDCDLAAAASGAVSGI
                     FSATGQTCIAGSRLLVQNSIKEAFTQRVVELGASAKKGDPMSPDTNIGPVTTTPQYHK
                     ILDYISIAKSEGARCLLGGGPATDPSLPGGQFVEPTIFTDVTPQMRIAREEVFGPVLS
                     IIGFDDEKEAIKIANDTIYGLAAGLWTQNMGRAIRVSSAIKAGTVWVNTYRAVSYMMP
                     FGGMKHSGIG"
BASE COUNT          354 a          450 c          429 g          367 t
ORIGIN      
        1 tccgatacca gagtgcttca tgccaccgaa gggcatcatg tagctgaccg cgcggtaagt
       61 gttcacccag acggtgccag ctttgattgc cgaggacact cgaatggcac ggcccatgtt
      121 ctgcgtccag aggccggctg caagtccata gatggtgtca ttggcgatct tgatggcttc
      181 tttctcatca tcaaatccga tgatcgataa cactggcccg aacacctctt cgcgtgcaat
      241 gcgcatttgc ggcgtgacat cggtaaagat cgtgggctcc acgaactgcc cgcctggcaa
      301 ggatggatca gtggccggtc cgccgccaag tagacaccga gcaccttcag atttggcaat
      361 cgagatgtag tcgagaattt tgtgatattg aggggtggtg gtgacaggtc caatattggt
      421 gtcgggtgac atggggtcgc cttttttggc ggaggcacca agctcgacca cgcgctgcgt
      481 aaacgcctcc ttaatggagt tctgcaccag caaacgagat ccagcgatgc aggtttgtcc
      541 ggtcgcagaa aaaatgccag ataccgcacc ggaggcagca gcggccaagt cgcaatcatc
      601 gaacacgata ttgggtgatt tgccgccaag ctctagcgaa actcgcttca tgctcttggc
      661 tgcttgcgag tagattcgcg cgcccgtgga atcggatccg gtgaaggtga tctttgcgac
      721 atcgggatga tcaactaaag ccgaacccac ttcgtggccc aagccggttg ccacgttaaa
      781 gacgccatcc ggaaaccccg cctcacgcgt caacttcgcg aactccagcg ttgaggccga
      841 cgcgtattcc gagggcttga ccacaaccgt gcagccggct gccaaggcgg cggcgcattt
      901 ccatgccaca aacaacaagg gtgaattcca agccgtaatg gccgcgacta cgccgatcgg
      961 ctcgcgtcgc gtgaacgcaa aatgctcggg cttatcaatg ggtacaacac ggccctcgat
     1021 tttgtcagcc aaaccagcaa agtaacgcca ccagttcggg tggtacatca gctggccttt
     1081 catctccgca aagagcttgc cgttgtcctt gacttcgact tgtgccagct cttgggcgtt
     1141 ttgctctacc aggtcagcca agcgaagcat caaacgggcg cgctcgccgc ctttcatggt
     1201 ggcccaaggg ccttcttcta atgcgtactt ggccgcttga acagcccggt cggcgtcttt
     1261 ctcacaccct ttggggatct ttgcccaggc ttgaccttga tagggatcca tgctgtcgat
     1321 ccactggttg ctgacgggcg cgacatactc gccattgata aagtgattgt aagttttcat
     1381 aaaaattccc ctttggtgtg tgttgttacg gcaaacttaa ccgtcttgtc tttatctccc
     1441 ggccaaaagg tagcagtccg caagccaaac agcaatggtt tgcatcgaca tggtttgcct
     1501 tgacatactc gttgtacgag cacctatcct gaccaagcgc tccggttgtc taaaagaaca
     1561 cacgtttaat ccggatcggc taccttgaga gtcaaatgta
//
LOCUS       DATBNL010000174         2352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_171189, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000174 DATBNL010000000
VERSION     DATBNL010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171189"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2352)
                     /locus_tag="VIC30_02920"
     CDS             complement(<1..>2352)
                     /locus_tag="VIC30_02920"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015600251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HEY7803372.1"
                     /translation="IHDPKINPSSLVQDPVRVARAIVPLGSPHPRIPAPIDLYRTHAN
                     GGGVSDGETGEGTQASNAQRRGRQASRGIDLSNEARLASLAVSLMSSVQEDWQAAPMI
                     HAPTLRESLAEPQTSPRTVRNPADQRDFVGEVSDATPEDVAAAIDAAQAACDVWQATP
                     VDERAAALERAADLFEANEERLIGLVVREAGKTLPTAIGEVREAVDFLRYYAIEARSL
                     VSELNGSEMTSKAVTDTPAQALQPLGVVTCISPWNFPLAIFTGQVSAALVMGNVVLAK
                     PAEQTSLIACEAVRLMHEAGVPTDALQCLPGLGQTVGQPLVASPVVDAVMFTGSTETA
                     LAIQASTSQRLNRHSQPVTLIAETGGLNALVVDSSALPEQVVADVIMSAFDSAGQRCS
                     ALRVLLLQEDSADTVVAMLKGAMDELALGNPARLSTDIGPVIDSDAMRIITDYIAEQK
                     SQGRALYQAKSPGNAALGNVVVPTLVEVDSLDAVNREVFGPVLHVVRYQRKDLDAVLA
                     QLNAKGFGLTFGVHTRIDEMSLHCVGDIHVGNVYVNRNIIGASVGVQPFGGQGLSGTG
                     PKAGGPLYLRSLVHTHGHTLPGWAQNATARTELNNTWPVERELVGPTGESNVYQLLPR
                     GPVLCMPQTQAGLSAMCEALAQTGNTPQVLPQTIAQFGDVIKQLETTSGVAFQVVQDR
                     VSDPSKTTNLTNPTNTTNPTSVTDALAMVDTEAVLFEGDADHLLAAQQALAKRGGAIV
                     PVFGLRTAQIQAGQTWPMHRLVHEKSVCINTAAAGGNASLMTLG"
BASE COUNT          504 a          720 c          617 g          511 t
ORIGIN      
        1 ccaagcgtca tcagactcgc gttgccacca gctgctgcgg tattgatgca gactgacttc
       61 tcatgcacca agcggtgcat cggccacgtc tgcccggctt gaatttgcgc cgtgcgcaat
      121 ccgaacaccg gcacaatcgc gccgcctcgc ttggccaacg cttgttgtgc cgccagcaga
      181 tgatccgcat caccttcgaa cagcaccgcc tcggtatcca ccatcgccaa cgcatctgtc
      241 acagatgtcg ggtttgtagt gtttgttggg tttgtaagat tcgtcgtttt tgaaggatct
      301 gagaccctat cttgcaccac ctgaaacgcc acgcccgatg ttgtctctag ttgcttaatc
      361 acatcaccga actgggcaat ggtttgcggc agtacctgtg gcgtattgcc ggtttgcgcc
      421 aaggcttcac acatggcaga caggcccgct tgcgtttgcg gcatacacag gacaggtccg
      481 cgcggcaaca gttggtagac attgctttca ccggtggggc ctaccaactc acgttcaaca
      541 ggccaagtgt tgttcaactc agtgcgtgct gtagcgttct gcgcccagcc cggcaaggtg
      601 tggccatggg tgtgtaccaa gcttctcaag tacagcggac cgccggcctt gggcccagtt
      661 cctgacaagc cctgaccacc aaacggttgc accccgactg aggcaccaat gatatttcgg
      721 ttcacgtaaa cgttgcccac atgaatgtca cccacgcagt gcagagacat ttcatcgatg
      781 cgggtatgaa ccccaaaggt caacccgaag cctttggcgt tcagttgtgc tagaacggcg
      841 tcgaggtctt tacgctggta gcgcaccaca tgcaacaccg gaccaaacac ctcgcggtta
      901 accgcgtcca gactgtctac ttccaccaac gtgggcacca cgacgttacc caacgcagca
      961 ttgccaggtg acttagcctg atacagcgca cgaccctgtg acttttgttc tgcgatgtag
     1021 tccgtgatga tgcgcatggc gtcactgtca attactggcc caatgtcggt cgataatcgc
     1081 gccggattgc ccaaggccag ttcatccatg gcacctttga gcatggcaac aaccgtatca
     1141 gcactgtctt cttgcagtaa caacacacgc agtgccgagc agcgttgtcc tgcagagtca
     1201 aacgccgaca tgatgacatc agccacgact tgctcgggta aagccgatga atccacgacc
     1261 aacgcattta agcctcccgt ttcagcaatc agtgtcaccg gttggctgtg acggtttagt
     1321 cgctggctcg tcgatgcctg gatcgccaat gccgtctctg ttgatcccgt aaacatcact
     1381 gcatcgacca caggactggc caccaagggc tggccaacgg tttgacccaa gccgggcaaa
     1441 cactgcagcg catccgtagg cacaccggcc tcgtgcatca gccgcaccgc ttcgcatgcg
     1501 atcagactgg tttgttcggc tggtttagcc agcaccacgt tacccatcac caaggccgca
     1561 gagacttgac ccgtaaaaat cgccagcggg aaattccaag gactgatgca ggtcaccacg
     1621 ccaagcggtt gcagggcctg tgccggtgta tcggtcacgg cttttgatgt catttcgctg
     1681 ccgtttagct cagacaccag agacctagct tcgatggcgt aatagcgcaa gaaatccacc
     1741 gcctcgcgaa cctcgccgat ggccgtgggc agtgtcttac ccgcctctcg caccaccaaa
     1801 ccaatgagcc gctcttcatt ggcttcaaac aaatccgcag cacgctcaag tgcggctgcc
     1861 cgctcatcaa cgggcgtggc ttgccagaca tcgcaggcgg cttgtgctgc atcaatggcc
     1921 gctgctacat cttctggcgt ggcatcgctg acttcaccca caaagtcacg ctgatcggct
     1981 gggttacgta ccgtgcgtgg tgaggtctgt ggttcggcta acgattctcg caaagtcggt
     2041 gcatgaatca tcggtgcagc ctgccagtcc tcttggacag aagacatcaa agaaacggcc
     2101 aatgaagcca gacgggcttc attggacaaa tcaataccgc gtgatgcttg cctgccacgc
     2161 cgttgtgcat tcgatgcctg tgtaccctcc cccgtttcac catcactgac cccaccacca
     2221 tttgcgtggg tgcgatacaa atcaatcggc gcaggaatcc tcgggtgcgg ggagccaagg
     2281 ggcacaatcg cgcgtgctac acgcaccggg tcttgtacca atgacgaggg attgatcttg
     2341 gggtcatgga tt
//
LOCUS       DATBNL010000175         2355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_111750, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000175 DATBNL010000000
VERSION     DATBNL010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111750"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VIC30_02925"
     CDS             <1..595
                     /locus_tag="VIC30_02925"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7803373.1"
                     /translation="AWAGPIGTGLESMTNNVINGKGAMPARGGNPNLTDAELQNAVIY
                     MANAAGGDFSAPADGASAEAPAVPAEPAKQVASALEAEAKEAGTDAGAPNLEEATTNT
                     PEQLAAAEAEPANVDLALGQKIYNQACMACHVAGVAGAPKFGDKAQWAPVIATGMDAM
                     IASVINGKGAMPARGGLAGASDKDLAAAVHYMVNAVQ"
     gene            complement(701..2227)
                     /locus_tag="VIC30_02930"
     CDS             complement(701..2227)
                     /locus_tag="VIC30_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEY7803374.1"
                     /translation="MQDFKTIGVVGAGAMGKGIVQIAAQAGFKVILFDQQLQATHAAR
                     DALNQTWDKLVGRGKLTQLAADSALANVHVAQTLGELADCDLVIEAIVERLDIKQALF
                     RELEGVVGPDCALVSNTSSLSVTAIASACSRPERVAGYHFFNPVPLMKVVEVIDGLRS
                     DPAVGDALMTLSHSMGHTPVRAKDMPGFIVNHAGRGFGTEGFRVVQEGVTDYVTVDDI
                     MRDQCGFRMGPFELMDLTGLDVSHAVMESVYRQFYDETRFRPSPLGSVRVAAGLYGRK
                     SGGGFYEYIEGRKKESALPVVPDVTDWPSVWVSPAHEHGHQMAMGLFNALGATIQTGS
                     RPNPDDLIVVTPFGEDVSTLVAAQRLDASRTVGVDTFGSVQPARRRTLMVSPATLPIW
                     RDKAHALLARDQVAVSVIQDSPGFVAQRVLATIVNIACDIAQQQIASPADIDRAVTLG
                     LNYPAGPLSLGDSLGSARVLEILTNLQAVTGDMRYRPSLWLKRRVQLGMSLLQTSATE
                     "
BASE COUNT          566 a          716 c          602 g          471 t
ORIGIN      
        1 ggcttgggca ggccccatcg gcactggact tgagtccatg accaacaacg tcatcaacgg
       61 caaaggtgcc atgcctgcac gcggtggcaa ccccaacctg accgacgctg agcttcaaaa
      121 cgccgtgatt tacatggcca atgcggccgg tggtgatttc tcggcgcctg cagatggtgc
      181 gagtgccgaa gcacctgccg tgcccgctga acctgccaaa caagtggcta gtgcattgga
      241 agccgaagcc aaagaggccg gcaccgacgc cggtgcgccc aacttagaag aggccaccac
      301 caacacgcct gaacagctcg ctgccgctga agccgaaccc gctaacgttg acttggctct
      361 cggtcaaaaa atctataacc aggcgtgcat ggcttgccac gttgccggtg tggcaggtgc
      421 gccaaaattt ggtgataaag cgcaatgggc accggtgatt gccaccggca tggatgccat
      481 gattgccagc gtcattaatg gcaaaggtgc catgcctgcc cgaggtggtc tagcaggtgc
      541 tagcgacaaa gacctggctg cggctgtgca ttacatggtc aacgccgtgc aataacaacc
      601 gaacacgcat agcgacaaca accaacggtt gttgttcaaa ataaagccgc acatcagtgc
      661 ggctttattg ttttatgtga ccttttgatt cccaacacac tcactcagta gcagatgtct
      721 gaagcaacga catacccaat tgcacacggc gtttaagcca caaactcggt cgatagcgca
      781 tatcgccggt gaccgcctga aggttggtca ggatttcaag gacccttgca ctacctaggc
      841 tgtcgcctag tgacaatggc ccagccgggt aattcagtcc cagtgtgacc gcacgatcga
      901 tatcagccgg gcttgcgatt tgctgctgag caatgtcgca ggcgatattc acaatcgtgg
      961 ctaacacgcg ttgcgcgaca aacccggggg agtcctgaat cacgctgacg gccacctgat
     1021 cacgcgcgag cagcgcatgc gccttgtcac gccatatcgg caatgtggca gggctcacca
     1081 tgagcgtgcg tcgacgagcg ggctgaacac taccaaaagt gtcaacaccc acagtacggc
     1141 tcgcgtctag acgctgcgca gcaaccaagg ttgaaacatc ttcaccaaac ggcgtgacca
     1201 cgatcaggtc atctgggtta ggacggctgc ccgtttgaat cgtggcacca agcgcattaa
     1261 acaagcccat ggccatctga tgaccgtgct cgtgagccgg gctcacccaa actgaaggcc
     1321 aatcagtaac gtcaggcacg acaggcaatg ctgactcttt tttgcggcct tcgatgtact
     1381 cgtaaaaccc accaccactt ttacggccgt agagaccggc cgctacccgc accgaaccga
     1441 gcggcgacgg cctgaaccgt gtttcatcgt aaaactggcg gtaaaccgat tccatgaccg
     1501 cgtgggaaac atctagccca gtgaggtcca tgagctcaaa tggccccata cgaaacccgc
     1561 actgatcccg catgatgtca tcgaccgtca catagtcggt cacaccctct tgcaccaccc
     1621 gaaacccctc tgtcccgaaa ccacggccag catgattaac aataaatccg ggcatgtcct
     1681 tggcacgcac cggcgtatgg cccatgctat ggctcaacgt catcaatgca tcgcccacag
     1741 ccgggtctga acgcaagcca tcgataacct cgacgacttt cattagtggc actggattaa
     1801 agaagtgata gccggcaact cgctcgggac ggctgcaagc cgaagcaatc gccgtcacgg
     1861 acagcgacga ggtgtttgac accaacgcgc aatcaggacc gaccacgccc tctagctcac
     1921 gaaacagggc ctgcttgata tcaagccgct caacaatcgc ctcaatcacc agatcacagt
     1981 cggccaactc acccaaggtc tgagccacat gcacattggc tagcgcactg tcagcggcta
     2041 gctgcgttaa tttgccacga cccacgagtt tgtcccaggt ctggttcagt gcatcacgtg
     2101 cggcatgggt ggcttgtagc tgctggtcaa acaaaatgac cttaaaccct gcctgagccg
     2161 cgatctgtac aatgccctta cccatggcgc ctgcaccgac gacgccgatt gtcttgaagt
     2221 cttgcattta cgtttcttcc tctattttta tcggtttgtt tttattgtgc ctgacaaaca
     2281 tgaccacgcc attgcctcag aacatcgatc cgattcatat tacccagttc gcgggggtct
     2341 ttgccaagcg tgacc
//
LOCUS       DATBNL010000176         1987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52086, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000176 DATBNL010000000
VERSION     DATBNL010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52086"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1675)
                     /locus_tag="VIC30_02935"
     CDS             complement(<1..1675)
                     /locus_tag="VIC30_02935"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEY7803375.1"
                     /translation="MTNYLKERSATNTDPTRTNNDAQVFAGLSLAALLLVGFAAQAQT
                     PPIPTPPVNAGSLLEEVERQRPAPAAPRQGPALNVPPLLEPSAAPTAEFTVKRFEFTG
                     NTKVRSSTLEAALADYLNRPIQFKDLQEATNVVADVYAKAGWLARAFIPRQDITEGTV
                     QIQVIEAVYGGSKVDGEFSHASHAQVQGTVDAQNEQGEVLSLTDVERGLLLADDLPGV
                     SVVGSLAAGENTRETDVLINVEDTPWITGRVQVDNQGNKSTGENEVSVNTAINGLAGY
                     ADQLNVYGLYTEGLSFISASYSVPIGYRGFRLGASYSTLGYRIVDDDLAAVDGSGFAN
                     TWGVEATQPLIRSRNTNVFARLGYTNKLFDNRAGNVSTSEYTVDVVALALTATHLDGW
                     AGGGYTTLTLTPSVGNVDYGRQPEYQRIIAATTESEGQYTKLRYGLTRQQNLPNNFSL
                     FGNLRGQVASKNLDSSERFYLGGPYGVRAYPNNEGGGSQGTLASVELRYNLMPELQLA
                     AFYDVGNIQVNKFNDHVAAADPNSGTLQGAGLSASWSGPYNVILNATWAI"
     gene            complement(1675..>1987)
                     /locus_tag="VIC30_02940"
     CDS             complement(1675..>1987)
                     /locus_tag="VIC30_02940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803376.1"
                     /translation="TFDAGDGSIDLSHPDNYFPSGVDANGSSIVITGDSNAASSQNSA
                     GTFYQEVVAEFEGVRLADSTARSIVTGDVLLITETDEQQITMALCTSSQSSASLACAS
                     Q"
BASE COUNT          452 a          572 c          517 g          446 t
ORIGIN      
        1 tgatagccca agtggcattc agaatcacgt tgtatggacc actccacgac gcacttaagc
       61 ctgcaccttg caaggtaccg ctgttcgggt cggcggccgc cacatgatca ttgaacttat
      121 taacctggat gttgcccacg tcgtagaaag ccgccagttg caactctggc atcaagttat
      181 agcgcagctc aactgacgcc agcgtgcctt gtgagccacc accctcgttg ttggggtagg
      241 ctcgaacacc gtaggggcca ccgaggtaga agcgctcaga cgaatcgagg ttcttgctcg
      301 ccacctgacc acgcagatta ccaaagagcg agaagttatt gggtaggttc tgttgtctag
      361 tgagcccata acgaagcttg gtgtactgac cctcagactc ggtcgtggcc gcaatgatgc
      421 gctggtactc cggctgtcga ccatagtcca cgtttcccac gcttggggtc agtgtcagtg
      481 tggtgtagcc accaccggcc caaccgtcta ggtgggtggc tgtcagcgct agcgccacca
      541 catcaaccgt gtactcactg gtgctgacat tgccggcacg gttgtcaaac aacttgttgg
      601 tgtagcccag acgggcaaac acattggtgt tgcgtgaacg gatcaggggt tgcgtggcct
      661 caacacccca agtgttggca aagccactgc catcgactgc ggccagatca tcatccacaa
      721 tccggtagcc caaagtgctg taactcgccc ctagcctaaa cccccggtaa ccaatcggta
      781 cgctgtagct ggcactgata aaagacaagc cttcggtgta cagaccatag acattcagtt
      841 ggtcggcata acccgccaga ccattaatcg cggtatttac actgacttcg ttctcaccag
      901 tcgatttgtt gccctggttg tccacttgca cacgaccagt gatccagggc gtgtcctcga
      961 cgttgatcaa cacatcggtc tcgcgcgtgt tctcaccggc tgccaacgag cccactactg
     1021 agaccccagg tagatcgtct gccaagagca agccgcgctc aacatcggtc aacgacagca
     1081 cctcgccttg ctcattttgc gcatctaccg tgccttgcac ctgcgcatgc gaagcgtggc
     1141 tgaactcacc atcaaccttg cttcccccat agacggcctc aatgacctga atctgaaccg
     1201 tgccctcggt aatgtcctga cgcggaatga acgcacgtgc caaccagcca gccttggcat
     1261 acacatctgc caccacgtta gtggcctctt gcaagtcctt gaactggatc ggacggttca
     1321 ggtagtctgc caaggcagct tcaagcgtgg aactacgaac tttggtgtta ccggtaaatt
     1381 caaaccgctt gactgtgaac tccgccgtgg gtgcagccga aggctcgagc aacggtggca
     1441 cgttcaaggc cggcccttga cgcggggcag ccggcgccgg acgctggcgc tcgacttctt
     1501 caagcaaaga acctgcgttg actggtggtg tggggatggg tggtgtttgg gcctgagcag
     1561 caaaccctac cagcagcagt gctgcaagcg acaggcctgc aaacacttgg gcatcattgt
     1621 ttgtgcgggt tgggtcggta ttggtcgctg atcgttcttt taaatagttt gtcattattg
     1681 tgaagcacaa gcaaggctag ccgaggattg agaagatgta cacaacgcca ttgtaatctg
     1741 ttgctcatcg gtttcagtaa ttagcagcac atcgcccgtc acgatacttc tcgctgtaga
     1801 gtcagctagc ctgacaccct caaactccgc aacgacttct tggtaaaaag tgccagccga
     1861 gttttgactg ctagccgcat ttgaatcacc agtaatcaca atcgacgaac cattggcatc
     1921 gacacctgac ggaaaataat tatctgggtg agacaagtca atacttccat caccagcatc
     1981 gaatgtc
//
LOCUS       DATBNL010000177         1973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_1998, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000177 DATBNL010000000
VERSION     DATBNL010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..952
                     /gene="mmsB"
                     /locus_tag="VIC30_02945"
     CDS             74..952
                     /gene="mmsB"
                     /locus_tag="VIC30_02945"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HEY7803377.1"
                     /translation="MAKISFIGVGNMGAPMANNLIEAGHQLCVYDVVQASMKAVPKAE
                     AASSALATLDGAEFVISMLPESRHVESLYLEQQLLDHIEKSALVIDCSTISPASSRKV
                     AQAANERGIAMIDAPVSGGTNGAHNATLTFMVGGRAADFERARALLESMGKNIFHAGD
                     AGAGQVAKIANNMMLGIQMAGVCEALSLGAANGMDPEVLSDIMRVSSGGNWVLEKYNP
                     WPDLMPNVPASNRYAGGFGVDLMLKDLGLAAGAAVDSKSMITLGETARNLFALHSKNG
                     YGQLDFSSLIEMIKAD"
     gene            1105..>1973
                     /gene="dctP"
                     /locus_tag="VIC30_02950"
     CDS             1105..>1973
                     /gene="dctP"
                     /locus_tag="VIC30_02950"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY7803378.1"
                     /translation="MTKRFGIKFGQLAAKFSAMAVVAAAVTIAPPKALAEDFKLISGW
                     PQNFPFTEEVIPRFIEIVKQESGGDVSVTVSGPDTVPSFEQLQPVQAGVFDMLYTHGA
                     YHSGTTGIGVAIDAVINDPVRRRTEGIFEFMDKHYQQQGMKLIALPSIGTKGFGFYLR
                     EPITGTPGLKGRKLRGTVTYHPLIKALGGVPVNLPPGDIYTGLQRGTVDGAAWALVGA
                     EAYKWDEVIDYIAKPTFGQLSLMILMNLDRWNELSPKMQAAITEAGRLIEIESIAVFD
                     KMQVDEELSLQKKG"
BASE COUNT          490 a          510 c          531 g          442 t
ORIGIN      
        1 tataaacaaa aaattcgccg aaacaagatg gtcatcaaaa gacccagcgg cgaaatagag
       61 acaaggagac atcgtggcga agatcagttt tatcggcgtg gggaatatgg gagcaccgat
      121 ggccaacaac ctcatcgagg cgggtcatca gttgtgtgta tatgacgtgg ttcaggcttc
      181 aatgaaagca gttcccaagg ccgaggcggc gtcctcggcc ttggccacgc tcgacggcgc
      241 tgagtttgtg atctcaatgc tgcctgagag ccgacatgtg gaatcgcttt accttgagca
      301 gcagttgctt gatcacatcg agaaatctgc cctcgtaatc gactgcagca ccatttcacc
      361 ggctagcagc cgcaaagtgg ctcaggcggc aaatgaacga ggcatcgcca tgatagatgc
      421 acccgtatcc ggtggcacca acggcgcaca caacgccaca ctgaccttta tggtgggtgg
      481 acgtgcggcc gacttcgaac gcgcacgtgc gctgcttgag tctatgggca agaacatttt
      541 tcatgccggc gatgcgggtg ctggtcaagt cgccaaaatt gccaacaaca tgatgctcgg
      601 cattcaaatg gctggcgtgt gtgaagcact ctcgcttgga gcagccaacg gcatggaccc
      661 agaagtactt agcgacatca tgcgtgttag tagtggaggc aattgggtgc tcgagaaata
      721 caacccttgg ccagatctga tgccaaatgt gcccgcttca aaccgctatg ccggtggatt
      781 tggcgttgat ctcatgctca aagacctcgg tctagctgct ggtgcagccg ttgacagcaa
      841 atcaatgatc accttaggtg agacggcgcg caacctgttt gctctacata gcaagaacgg
      901 atatggtcag ctcgacttct ccagccttat cgagatgatc aaagctgact gacacagctt
      961 gcctgtgcac gctgcctacc gtcgcgtgca gcacacaaac gtattaatca aggaggaagc
     1021 acaacacccg tgacgcaaga tatataaaga atcgttcccg ttttagccaa agacctgtca
     1081 attaacgata ttcaggagac aaacatgaca aagcgttttg gtattaagtt tggccaattg
     1141 gcggccaagt tctcagccat ggcggtggtc gccgcagcag tgaccatcgc tccacccaag
     1201 gctttagctg aagacttcaa actgatctct ggctggccac aaaacttccc gttcactgaa
     1261 gaagtgattc cacggttcat tgaaatcgtc aaacaagagt ccggtggcga tgtcagcgtg
     1321 actgtcagtg gtcctgacac cgtcccttca ttcgaacagt tacaacccgt gcaggccggc
     1381 gtgttcgaca tgctctacac ccacggtgcg tatcactctg gcaccaccgg tattggtgtg
     1441 gccattgatg cggtcatcaa cgatcctgta cgtcggcgca ccgaagggat ttttgagttc
     1501 atggacaagc attaccagca acaaggcatg aaactcattg ctttgccgtc cattggcacc
     1561 aagggctttg gtttttactt gcgtgaaccg atcaccggca caccagggct caagggtcgt
     1621 aagctgcgtg gcacggtgac ttatcacccg ctcatcaagg cgttaggtgg cgtaccggtc
     1681 aacctgccac cgggcgatat ctatacgggt ttgcagcgcg gcactgttga tggcgcagcc
     1741 tgggcgcttg ttggggcaga agcctacaag tgggatgaag tcattgacta catcgctaaa
     1801 cccacgtttg gtcagctcag tctcatgatc ctgatgaacc ttgatcgctg gaatgagctt
     1861 tcaccaaaaa tgcaggctgc catcaccgag gctggtcgtt tgattgaaat tgaatcaatc
     1921 gcggtgtttg acaagatgca ggtcgatgag gagctcagtc ttcagaaaaa agg
//
LOCUS       DATBNL010000178         3078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52120, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000178 DATBNL010000000
VERSION     DATBNL010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52120"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VIC30_02955"
     CDS             <1..186
                     /locus_tag="VIC30_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803379.1"
                     /translation="SFATGPDFTVSSAAMARDSAVIEVGIGASLGPSSRLNVVYATTL
                     SGQSSSQMLQAQLQWWF"
     gene            542..1954
                     /locus_tag="VIC30_02960"
     CDS             542..1954
                     /locus_tag="VIC30_02960"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY7803380.1"
                     /translation="MLKQLLHRKALPTQDSTRSGGLLRNITLFQLTLMGVGSTLGTGI
                     FFALAETVPIAGPAVVLSFVLAAVTAALTALCYAEVSSSLPVSGSSYTFTYMTLGQGA
                     AMLVAACLLLEWGIAGAAVAVGWSSYLNDFIFIVTGQQIPLSIQTSPFLDGPDGWVLS
                     GESYFNLPAVALVWMCTILLLRGSRESAIVNAVLTLSKLGVLTLFVILALVAFEQQNF
                     IPFMPFGIEGVGAAAAIVFFSFIGLDAVVNASEEAINPQRNIPLAIIIALIVVTAVYV
                     LVAVSSLGVQPASDFQGHDGSLTTILQRATQTPWLGGVLAAGAVMSIFSVTLVCLYGQ
                     SRIFFAMARDKMIPEVLCKIDPHSRSPRAGILLSAIIVTPLAAVVPSHMLWSMVSLGT
                     LITFIAVAIALMVLRSYYKREPQGYRTPWYPLVPILSISSCLYLLFSLHATVYQLFAV
                     WLFFVIVFYFLYSRKRALVH"
     gene            2155..2397
                     /locus_tag="VIC30_02965"
     CDS             2155..2397
                     /locus_tag="VIC30_02965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803381.1"
                     /translation="MLSKLHLNTLALSMMLIGSPTWAQMSPSDFETPEYFRNWGLKYT
                     FAAEAYSLGYSGAGIKIGIADTQAQLSHPEFVGRTY"
     gene            2437..3078
                     /locus_tag="VIC30_02970"
                     /pseudo
     CDS             2437..3078
                     /locus_tag="VIC30_02970"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
BASE COUNT          600 a          738 c          857 g          883 t
ORIGIN      
        1 tcgtttgcca cagggccaga cttcacggtc tcgtcagcgg cgatggcccg ggactcggca
       61 gtcattgaag tgggcattgg tgccagtctt gggccatcga gccgtctgaa tgtggtgtat
      121 gccaccacgc tgtcaggtca gtcgagcagc cagatgctgc aggctcagtt gcagtggtgg
      181 ttctgagggc gtttctgatg tcggtcgctc ttgggagtaa ctcaagcacg cagtgctaag
      241 tcggtaatga gaccagatgg atgtgacatg catcgagctt gagtgaagct cgctggtcag
      301 tatcgggcgc gtcagtcaag gcgattcgga tacatgagcg gcgccaccgc cgatggcagt
      361 tctgcgtggt gccgatcgac gtgtttgatg ggtttatccg gtaaactcct gcatctttga
      421 cagttaacat ttcagtcaca atgcatttcc taaaagtgtc tgcacgtcct ggcattgaag
      481 gccagcagga tggtgttcgt tcgtgtagcc gatggtctgc ggtgtagacg aggatcacct
      541 catgctcaaa cagcttttgc atcgcaaggc gttgccaaca caagatagca ccagatcagg
      601 cggtttgttg cgcaacatca ccctgtttca attgaccctc atgggtgtgg gtagcacgtt
      661 gggtactggg attttttttg cgttggcaga aacggtccct attgctgggc cggccgtggt
      721 tttatcattt gtgctcgcgg cagtgaccgc tgcattgact gccctttgtt acgctgaggt
      781 ctcttcgtca ctgccggttt ctggctcatc ctataccttt acctacatga ccctgggtca
      841 aggcgctgcc atgctcgtgg ctgcctgttt attgctcgag tggggcattg ccggtgctgc
      901 tgtggctgtg ggatggagca gttatctcaa tgacttcatc tttattgtca cgggtcagca
      961 aatcccgttg agtatccaaa cttcaccgtt tctcgatggg cccgacggct gggtgttgag
     1021 tggcgagagt tatttcaatt tgcctgcggt tgccttggta tggatgtgca cgatcttgct
     1081 gctcagggga tcacgtgaat cggcaatcgt caatgcggtg ctgacgttat ctaagttagg
     1141 tgtgctgacg ctttttgtga tcttggcgct cgtggctttt gagcaacaga attttatacc
     1201 gttcatgcca tttggcattg aaggcgtagg tgcagcggcg gccattgtgt tttttagttt
     1261 cattggactt gacgccgtgg tcaacgctag tgaagaggcg atcaacccac agcgcaacat
     1321 ccctttggca attatcattg ctctgattgt agtgactgcg gtgtatgtgc tggttgcagt
     1381 aagtagtttg ggtgtgcaac cggcgagcga tttccaggga catgacggca gtcttaccac
     1441 cattttgcag cgagccaccc agacaccatg gttgggcggg gtgctggctg ccggtgctgt
     1501 gatgtctatt tttagtgtga ccttggtttg cttgtatggg caatcgcgta ttttctttgc
     1561 catggctcgc gacaaaatga ttcctgaggt tctttgcaag atcgatccgc acagccgcag
     1621 ccctcgggcg gggattcttc tgtcggcgat cattgtgaca ccgctggcag cggtggtgcc
     1681 tagccatatg ctctggagca tggtaagcct aggtacgtta attactttta ttgccgtggc
     1741 cattgccctg atggtgctgc gcagctacta caaacgagag ccgcaaggtt atcgaacacc
     1801 ttggtaccca ctggtgccca tattaagcat tagcagttgt ctgtatttgt tgttcagctt
     1861 gcacgctacg gtgtatcagt tattcgccgt ctggttattt ttcgtgatcg tgttttattt
     1921 tctgtacagt cgcaagcgtg ccttggttca ttaagtccga tgccctaaga ttcttcatct
     1981 tcgaagtgtc gagttgagcg ctgtttgtca acggaaccaa aaccacaccg agcaatcaaa
     2041 tttgttggtt ttttgttgtg ccacaactag aaggtttatc tggtggcgtt tgcgttatgt
     2101 ttgccttgta ctgaaatgct cgaacaccaa ccacttgacc ttgctgtaaa gacaatgctc
     2161 tcaaaacttc atttaaatac gcttgccttg tcaatgatgt tgattggctc acccacttgg
     2221 gcgcaaatgt caccctcgga ttttgagacg ccggaatatt tccgtaactg gggacttaag
     2281 tacacctttg ccgctgaggc ttactccctt ggttattcgg gcgctggcat caaaataggt
     2341 atcgctgaca cgcaggcgca actcagccac cctgagtttg ttggcagaac ctattagcct
     2401 gcgcctgaac caccgtttcc aacgccgggc tatcccgatt ttccagacca tggtacgcac
     2461 gtgatgggcg ttgctgcggc ggcacgcaat ggcgtaggca tgatgggtgt ggcgtttgat
     2521 gcttcactcg caagcattgt ttctgttggc cggccgggct atcccatgtc gagcaattgg
     2581 gcgcaagagt tggtagatgc tggtgtttca gtcatgaatg gcagttttgg gcctcgcgct
     2641 gcaccgggtt ttgattcacc gtattacgac gatttttcgg atgttggttt tcaattttat
     2701 acgggtgctg acctgcttgg cgatgtcgag agtcttcaaa cgttgtctga tgctgatgtc
     2761 gtcatggttt tttcggcggg caacaatcgg cgtgctcaac ccacagcgtc tcgcaacgtg
     2821 gcaggctacg gcctagcacc attgatcaca gaggccaata cagcgcttgg gtataccgat
     2881 aacccagcag atgccattta tcgcatttac tccgacgatg ccgatgatca aaaccccaac
     2941 acgtgggtgg gtaatcaatt gccatttgat gaaatcaagg gttttgattt ttccagcctc
     3001 gccggcagcc tcattgtggt gactgcggtc gacattaacg aacgcacgaa tgttgtgact
     3061 cttgcgggtt ttagtaac
//
LOCUS       DATBNL010000179         1814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_82053, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000179 DATBNL010000000
VERSION     DATBNL010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82053"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VIC30_02975"
     CDS             <1..484
                     /locus_tag="VIC30_02975"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HEY7803382.1"
                     /translation="YRCPHGLCAHRSHGRKAAYTCSMDKAKHSETTEVAEASQPSIAV
                     YYDGGCPMCAKEIAHYRKIDTAGNVQWVDIAGPNPSCPIGYNQPTLLARFHVKELATD
                     RMLDGAAGFVRLWQAMPTPWRQLGAIASLAPVTWVLELGYRVTLKVRPLMTRYLFKRS
                     "
     gene            591..1700
                     /locus_tag="VIC30_02980"
     CDS             591..1700
                     /locus_tag="VIC30_02980"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEY7803383.1"
                     /translation="MNPILLFANKRHLRLLRSLSDTTLRQQLLRLVAVLVLLVLAHTV
                     AMRVFEGFSWADSLWLTLTTVTTVGYGDVSATTLWGRAATVILLYAAGIAVLAQVAAM
                     YFEFRQDRRNRILNGQWSWDMQDHIVLINSPKEGAERYFEQLVSQLRRSSLPTGRKPL
                     LIVTSYMSQGIPDSLRAMDVAHVNASGIDAQAIEQSSLAKASIVVVLCHDPINPIWDS
                     VNFDLVTRCREANPNAMIVAETVSDDNRQRLINAGANQVVRPIRSYPELLVRTMLAPG
                     TEQVIEDLFDSQGEECVRYAVTYQGKWADLVTKLITADIGLALAYANEQGKVISNPPP
                     HNTINASALFVMVREGNTQAVQDVQALVAEPQSPS"
BASE COUNT          434 a          499 c          470 g          411 t
ORIGIN      
        1 gtatcgttgc ccccatggcc tgtgtgctca tcgtagccac gggcgtaaag cggcctacac
       61 ttgcagcatg gacaaagcca aacactccga gacaaccgag gtagcagagg cgagccaacc
      121 gagcatcgcc gtctactacg atggcggctg ccccatgtgc gccaaagaaa ttgcgcacta
      181 ccgcaaaatc gatacggccg gtaacgtgca atgggttgat attgcgggtc ccaaccctag
      241 ctgcccgatt ggttacaacc agccaacgct gctggcgcgt ttccacgtca aagaactcgc
      301 tacagaccgc atgctcgatg gcgcggctgg atttgttcga ctgtggcaag ccatgcccac
      361 accctggcga caactaggtg ccatcgcatc gttggcaccg gtgacctggg ttttagagct
      421 cggctatcgc gtcacactca aagtccgtcc cctgatgacg cgttatctgt ttaaacgcag
      481 ctgaccgaac caagcctaaa ccaatgtacc gatagacctt tggggcttcg ctaagtgaac
      541 gcgaattaac tcgcttacac tcagaccaac aaggatttat tcagtcaatc atgaatccca
      601 ttctgttgtt cgcaaacaaa cgccatctcc gcttgttgcg cagtctgtct gacacgactt
      661 tgcggcaaca actgttgcgg ctggtcgctg ttttggtgtt gctggtattg gcacacacag
      721 tggccatgcg tgtgtttgaa ggctttagct gggctgactc actgtggttg acactaacga
      781 ccgtgaccac tgttggttac ggcgatgtct ctgcaaccac tttgtggggt agagcggcca
      841 cggtcatact gctttacgct gcgggtattg cggtgctggc gcaagttgcc gccatgtatt
      901 tcgaatttcg tcaggatcgg cgcaatcgca ttctgaacgg tcaatggagt tgggacatgc
      961 aagatcacat cgttttgatc aatagcccca aagagggtgc tgaacgctat ttcgaacaat
     1021 tggtttcgca gcttcggcgc agtagcctgc ccaccggacg aaagccattg cttattgtca
     1081 cctcatatat gagtcagggt atacctgaca gcttgcgtgc catggatgtg gcgcacgtca
     1141 atgcctctgg cattgatgca caagccatcg aacaatcgag tctggccaag gcatccatcg
     1201 ttgtggtgct ctgccatgac ccgatcaacc cgatttggga cagtgtgaac tttgacttag
     1261 tgactcgctg ccgtgaggca aaccccaatg ccatgatcgt ggctgaaacc gtgtctgatg
     1321 acaatcgcca gcgtcttatt aacgcaggtg ctaatcaagt ggtcagaccg attcgcagtt
     1381 atccggagct attggtcaga accatgctag cgccgggtac cgagcaagtg attgaggatt
     1441 tgtttgacag ccaaggcgaa gagtgtgtgc gctatgcagt gacataccaa ggcaaatggg
     1501 cagatcttgt cactaaactc atcaccgctg acattggtct tgccctagcc tatgctaacg
     1561 agcaaggcaa agttatctct aatccaccac cgcacaacac catcaatgcc agcgccttat
     1621 ttgtcatggt gcgcgaaggc aacacccaag ctgtgcaaga cgtacaggcg ttagtcgcag
     1681 aaccgcagag cccatcgtaa tcgcgagata acaaacagcc aaacactaaa cagccaagaa
     1741 cacctcgatc cggcgcgcgg tcggcagcgg caattgactg gcaaattggt ctacagcagc
     1801 tttcagcccc tgaa
//
LOCUS       DATBNL010000180         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_131801, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000180 DATBNL010000000
VERSION     DATBNL010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131801"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /gene="thiD"
                     /locus_tag="VIC30_02985"
     CDS             <1..693
                     /gene="thiD"
                     /locus_tag="VIC30_02985"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEY7803384.1"
                     /translation="AVTHIHPVPVEFVGAQIDTLFDDVEIAAAKIGMLGQAPVIRMVA
                     DKLSGRCPQHLVLDPVMVAKSGDMLLEPNAVGQLREALLPLATMITPNLPEAGVLLER
                     TGAESVKAMRQHAERLREQMSHDGQRWVFLKGGHLPGAETTDLLHDGDVMIELPGQRV
                     NTRNTHGTGCTLSAALATLLARGLPAREAAEQAKAYLVQAIASADQLSVGQGHGPVNH
                     FHALWKTTSTIY"
     gene            717..1397
                     /locus_tag="VIC30_02990"
                     /pseudo
     CDS             717..1397
                     /locus_tag="VIC30_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003817656.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
     gene            1407..>2031
                     /locus_tag="VIC30_02995"
     CDS             1407..>2031
                     /locus_tag="VIC30_02995"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY7803385.1"
                     /translation="MAGMRRLTTLLMTLVVSALCAPTMAMDLTQAWQLALTNDPSYQA
                     ARANYRAAAQKTPQARAALLPEIEGSLTGAYLDNRATGTLGQVFQGSRSAWTLSLTQP
                     LFNWSAIQTFEQSKLVVANAEIQLQVAYQDLMLRVSEAYFSILALQDELEALRAEQRS
                     IAEQLSAAKRRFELGDATVTDALETQARFDLTAADIIGLENELNNAED"
BASE COUNT          453 a          601 c          566 g          411 t
ORIGIN      
        1 gcggtgacac acattcatcc cgtaccagtt gagtttgtcg gcgcgcaaat cgacaccttg
       61 ttcgatgacg tcgagattgc ggccgccaaa atcggtatgc taggtcaagc gcctgtcatc
      121 cggatggtgg ccgacaagct cagtggacgt tgcccacagc acttggtgct tgaccctgtc
      181 atggtcgcta agagcggtga catgctactg gagcccaacg ccgttggtca gttacgtgaa
      241 gctttgctgc cgttggccac catgatcaca cccaacctgc ccgaagctgg cgtgctgctc
      301 gagcgcactg gcgccgagag cgtcaaagcc atgcgccaac atgccgagcg cctgcgcgag
      361 cagatgagcc atgatggtca acgctgggtg tttctgaagg gtggccacct gcccggcgct
      421 gagacaaccg acttgttgca tgacggtgac gtcatgatcg agttgccagg ccagcgcgtc
      481 aatacgcgca acacccatgg cacgggctgc accttgtcgg ctgcgctggc caccttgttg
      541 gcgcgcggct tgccggcccg agaagctgcc gaacaggcca aagcctatct ggttcaagct
      601 atcgcgagcg ccgatcagtt aagtgttggc cagggtcatg gtcccgtgaa tcatttccat
      661 gcattatgga aaaccactag tacaatctat tagttatctt ctttcgacct ctgcacatga
      721 aaacgccaag cctgtccgac atcgaaatcg cccgattcaa catgattgag cagcagatcc
      781 gcccgtggga tgtcggcgat gatgcgctac tgaaagccat cgccgaagtc ccacgcgagc
      841 attttgtacc tgccgaacac caaagcctag cctttagcga cctagaaatc ccgctggtgg
      901 ttcacggcat cgacacgcat caggtcatgc tcgcccccaa aatccaagcc cgcttggcgc
      961 aagcgctggc actcgagcca gccgactgtg tgctggaaat tggcacgggc acaggctagc
     1021 aagcagcact tttgggggct ctgtcgcgtc aggtcacctc gattgaaatc gacactcggc
     1081 tagcgagctt tgcgcaagac aacctcgcag cgctgggcat cggtaatgtc actgtggaaa
     1141 acggtgacgg cagtgaaggc tggggcaata cggaatatga cgccattttg gtgtcaggct
     1201 cagtgccaag cgtgcccgat gcgctgaagt atcaactgcg aattggcggg cgcttggttg
     1261 tcgtcgtggg tcaagcgccg gtgatgaccg cgatgcggat cacgcgcatg actgcagcga
     1321 gtttcgagac ggaatcgttg tttgagaccg tgatcaaacc cttgattggc ccgcgcgtct
     1381 cacgattcaa gttctaaagg aaaaccatgg cagggatgcg tcgattaaca acattgctaa
     1441 tgacgctcgt ggtctcggct ctatgcgccc cgaccatggc catggatctg acccaagcct
     1501 ggcagctcgc actgaccaac gacccaagct accaggcggc ccgcgctaac taccgcgccg
     1561 cggcacaaaa aaccccacaa gcacgcgcag cgctcctgcc agagatcgaa gggtcactga
     1621 ctggcgccta ccttgacaac cgtgccaccg gtacacttgg tcaggtgttt caaggtagcc
     1681 gctcggcctg gacattgagt ctgacccaac ctctgtttaa ctggtcggcg atccagacat
     1741 ttgagcagtc gaagctggta gttgcaaacg ccgagataca actgcaagtc gcttatcagg
     1801 acctgatgct gcgtgtcagc gaagcctact tctccattct cgccttgcaa gatgaacttg
     1861 aggccctacg cgctgagcaa cgttcgattg ctgagcaact ctcggcagcc aaacgtcgat
     1921 ttgagctcgg tgatgccacc gtcaccgatg cccttgaaac acaggcacgc tttgatttga
     1981 ccgcagccga catcattggc ctggaaaacg aactcaacaa cgccgaagac a
//
LOCUS       DATBNL010000181         1704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_71915, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000181 DATBNL010000000
VERSION     DATBNL010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71915"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..468)
                     /locus_tag="VIC30_03000"
     CDS             complement(73..468)
                     /locus_tag="VIC30_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803386.1"
                     /translation="MAGLLAFYGGWFGAHWFYLGRPYPWVLGVLAAVLLFLASLADVW
                     WDNPAIFVLFLPAFVGFIEAVVLCLTSDAKFDARYNPGYVRDKPTGWGPVLVASFSLL
                     IGTVLTMFAIAHVVLHIWQRLGWLDGLNF"
     gene            783..>1704
                     /locus_tag="VIC30_03005"
     CDS             783..>1704
                     /locus_tag="VIC30_03005"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY7803387.1"
                     /translation="MKQTSPDTDYDLAIVGGGPTGSTLALLLARLAPDPGRIVLFQSE
                     AVSRWDVAAHADKRVIAINEGTRVLFEDLDAWPNDATPIETIHVSQRGRLGRTLITRD
                     ELNVAALGYVVRYSSLHANLLEAAEQSGITVITDKVASVMQNGDAVAIETDTRHITVG
                     LAVRADGLNHGGAPDHYRQVALLGQARVTQPKPGWAYERFTRGGPFAVLPHPDGDGSQ
                     SIVWCCEPERAKEIETLSLDALASAMGETFGDRLGKFVVTEKLTAYPLYRSLDPQPVN
                     GRVVNVGNAAQTLHPVAGQGMNLGLRDVATL"
BASE COUNT          401 a          514 c          451 g          338 t
ORIGIN      
        1 gaaccggctt tcgagggtgt ttgttagttt ttgaccgtag ctgcgacaaa catccgcttt
       61 agaaaacccg cttcagaaat tgagcccgtc aagccaaccg agtcgctgcc atatatgcag
      121 cacgacgtgt gcaatggcga acatggtcaa cacagtacca atcaggagac tgaaactggc
      181 caccaagacc gggccccagc ccgtgggttt gtctctgacg tatccggggt tgtaacgcgc
      241 atcaaacttg gcatcactgg ttaaacacag cacaacggcc tcgataaagc ccacaaatgc
      301 cggcaaaaac aacacaaaaa tcgctggatt gtcccaccaa acatcagcca ggctcgccag
      361 aaacaacaac accgccgcca agacgccgag cacccatgga taaggacgcc ccaggtaaaa
      421 ccagtgtgcg ccgaaccaac caccgtaaaa ggccaacagg cctgccatga ccttgctacg
      481 cagcatcctc ggtgggtgac tggtctcaga agcgggcggc gccccattgt gttcggttga
      541 gttttgcatg cacagcattc tatacgcagt cgacagacct acggatggtt ggtccgcatt
      601 ctggtgttga tattcctgtt ctgtcgtatg ggtcagttca ggtgacccaa ctgagaccag
      661 gctacggcaa cggcaatgac caatgacact accgcgggtc tgcattactc cctgccaaac
      721 caacgattgg ctacactagg ctcatgtccg acacaaagcc taccgcggta gttgatcctg
      781 ccatgaaaca gacctctcct gacactgact acgacttggc gattgtcggc ggtgggccaa
      841 ccggcagcac cttggcgcta ttgcttgcac gtttggcacc agaccctgga cgtatcgtct
      901 tatttcagtc agaggcagtt tcacgctggg atgtggctgc ccatgctgac aagcgagtca
      961 tcgccattaa cgaaggcacc cgggttttgt ttgaagacct agacgcctgg ccaaacgatg
     1021 ccacccctat tgaaaccatt catgtctcgc agcgtggccg acttggacgc acactcatta
     1081 cccgcgacga gttaaacgtg gcagcacttg ggtatgtcgt gcgctacagc agcctgcacg
     1141 ccaacttact agaggcggcc gagcaatctg gcatcacggt catcaccgac aaagtcgcta
     1201 gcgtcatgca aaacggcgat gcggttgcca tcgaaaccga cacgcgtcac atcacagtcg
     1261 gtttggccgt gcgcgccgat ggcctaaacc atggcggtgc accggaccat tacaggcaag
     1321 tcgccctgct cggccaagcc cgcgtgacgc aacccaagcc cggctgggct tatgagcggt
     1381 ttacccgcgg cgggccgttt gccgtgctgc cccacccaga cggcgatggc tctcaatcga
     1441 ttgtctggtg ttgtgagccc gaacgcgcca aagagatcga aaccctgagt ctggatgcac
     1501 tggcatcggc catgggcgaa acctttggtg accgattggg caaatttgtc gtcacagaaa
     1561 aactcaccgc ctatccgcta tatcgcagcc ttgacccaca gcctgtgaat ggtcgtgtcg
     1621 tgaacgtggg caatgccgcc cagaccttgc accccgtggc cggtcaaggc atgaatctgg
     1681 gtctacgtga tgtggccaca ctcg
//
LOCUS       DATBNL010000182         2459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_131802, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000182 DATBNL010000000
VERSION     DATBNL010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131802"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VIC30_03010"
     CDS             complement(<1..272)
                     /locus_tag="VIC30_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY7803388.1"
                     /translation="MQPIQRVNVEKRLSDMAIHNGVAYLAGQIPEDASLDITGQTEQV
                     LSIIDGLLQQAGTNKSRILMAQIFIANMAEFDGMNKAWDAWVADGNA"
     gene            complement(334..1512)
                     /gene="pncB"
                     /locus_tag="VIC30_03015"
     CDS             complement(334..1512)
                     /gene="pncB"
                     /locus_tag="VIC30_03015"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0019358 - nicotinate nucleotide salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEY7803389.1"
                     /translation="MIIQSLLDTDLYKFSMMQVVLHHFPAAHVEYRFQCRTPDIDLSD
                     HLPEIELEIDALCQLKFTDEELEYLGGLRFIKSDFVEFLGLFHLPRKSIELTKADAPG
                     GIAITVKGPWLHTILFEIPVLAIVNEVYFRHADPAPEPEEGRRRLRDKMKLVTQEPDM
                     VTFRVAEYGTRRRFSRRWHDEVVSMLKSAMGEHFAGTSNVDMARRHGITPIGTMGHEY
                     LQACQALGPRLRDSQIFALETWAKEYRGDLGIALSDVYGLDAFLRDFDMYFCKLFDGA
                     RHDSGDPFIWGERILAHYDLNRVDARTKTLVFSDALTFPLAIEIARQFQGRARVSFGI
                     GTNLTNDLGLQPLQIVMKMVRCNGQPVAKVSDAPEKTMCDDPAYLAYLRQVFDLPPEP
                     "
     gene            1690..2016
                     /gene="fdxA"
                     /locus_tag="VIC30_03020"
     CDS             1690..2016
                     /gene="fdxA"
                     /locus_tag="VIC30_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HEY7803390.1"
                     /translation="MTHVVTENCIKCKFTDCVDVCPVDCFKEGPNFLIIDPDECIDCA
                     VCIPECPANAIFAEEDVPEDQVGFIALNAELTPVFKTITRTKEPLPDADQWNGVPDKL
                     KHLEKP"
     gene            2067..>2459
                     /locus_tag="VIC30_03025"
     CDS             2067..>2459
                     /locus_tag="VIC30_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015065078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY7803391.1"
                     /translation="MSETQSQPQSQPQQKYNRQRVLEVKQWDSPNLVSVSVTRDPAFQ
                     FIPGQFARIGLPSDSTSTEPDLWRAYSMVSHPDDDYLEFLSVTVPDGQFSPKLASLSE
                     GSDLWVEKAPLGFLTLERFLPARALWLVS"
BASE COUNT          618 a          685 c          590 g          566 t
ORIGIN      
        1 gcattgccat cggcaaccca cgcgtcccaa gccttgttca tgccatcaaa ctcagccatg
       61 ttggcaataa aaatctgtgc catcaaaatg cgagacttgt tggtgccggc ctgttgcaac
      121 aagccatcga taatcgatag cacttgttcg gtctgccccg tgatgtcaag cgaggcatcc
      181 tcaggaattt gacccgccag ataggccacg ccattgtgga tcgccatgtc cgagaggcgt
      241 ttttcgacat tcactcgttg aatgggttgc ataaaattcc tcttgtgctg tgcagttaat
      301 gaaatggggg cttagccatg ggcctcaccc gactcaaggt tcaggcggca gatcaaagac
      361 ttgccgcaaa taggccaaat acgcagggtc gtcacacatg gttttttctg gcgcgtccga
      421 caccttggcc actggctgac cgttacaacg taccattttc atgacgattt gcagcggctg
      481 caagcctaag tcgttagtca agtttgtacc aatgccaaat gacacccgtg ccctgccttg
      541 aaactgccgg gcaatttcaa tggccaacgg aaacgtcagc gcatcagaaa acaccagtgt
      601 tttggtgcgc gcatcaacac ggttaaggtc atagtgcgcc agaatacgct caccccaaat
      661 aaaggggtcg cccgaatcat gccgcgcgcc gtcaaacagc ttgcaaaagt acatatcaaa
      721 gtcacgtaag aacgcatcaa gcccatagac gtcagacaat gcgattccta gatcgccccg
      781 atattccttc gcccaggtct caagcgcaaa aatctgcgag tcccgcagcc ttggtccaag
      841 cgcctgacac gcttgcaagt actcatgacc catggtgcct atcggggtga tgccatgacg
      901 tcgagccatg tcaacgttac tcgtaccagc aaagtgctca cccatggcgg atttcagcat
      961 cgagacgact tcgtcatgcc agcgccgcga aaaccgtcgt ctcgtgccgt actccgcgac
     1021 gcgaaacgtc accatgtctg gctcttgcgt cacaagcttc atcttgtcgc gcaagcgacg
     1081 cctaccctct tctggttcgg gcgcgggatc tgcatgacgg aaatacactt cattgacaat
     1141 ggcaagcacc gggatttcaa acaaaatggt gtgtaaccac ggccccttga ccgtaatcgc
     1201 aataccgcct ggcgcatcgg ccttggtaag ctcaattgac tttcggggca agtgaaatag
     1261 ccctaggaac tcaacaaagt cacttttgat aaagcgtagc ccgccgagat actcgagctc
     1321 ctcgtcagtg aatttcaact gacaaagcgc atcaatttca agctcaatct ctggcaagtg
     1381 atcactcaaa tcaatgtctg gcgtgcgaca ttgaaagcgg tactctacgt gggctgccgg
     1441 gaagtggtgc aacaccactt gcatcatgga aaacttatag aggtctgtat caagcaggga
     1501 ctggataatc atgaatggat gatccgcatc aatatcgggt gaggcgtcaa gttagcacac
     1561 agcagcacaa ccatcatggt catgtcacta ttcgctttgg cattggctaa aatgccactt
     1621 taagatgaat acacggtgtt tgtctttatt tcgttgcctg tgcagcatct ttgagaacca
     1681 ttgacaccca tgacccacgt cgttactgaa aactgtatca agtgcaaatt cacggactgt
     1741 gttgacgtct gtccggttga ttgctttaaa gaaggaccga attttctgat cattgaccca
     1801 gacgaatgca tcgattgtgc cgtttgcatc ccggaatgtc cggccaatgc catttttgct
     1861 gaagaagacg tccctgaaga tcaagtgggt tttatcgcgc ttaatgccga attgacgccc
     1921 gtgttcaaga caatcacccg caccaaagag ccgctacccg atgctgacca atggaacggc
     1981 gtgcctgata agctcaaaca cctagaaaag ccctgagcct aaacccgcac catttgtacc
     2041 cacgacaagc tccatttcga ggcaacatgt cagaaacgca atcgcaaccc caatcgcaac
     2101 cgcagcagaa atacaaccgt caacgcgtgc tagaggtcaa gcagtgggat tcgcccaact
     2161 tggtttctgt gagtgtgact cgcgatccag cgtttcagtt catacccggt caatttgcac
     2221 gcattggcct gccaagtgac agcacaagca ccgagcctga tctctggcgg gcctattcca
     2281 tggtctccca cccggacgat gattaccttg agtttctcag cgtaaccgtc cctgacgggc
     2341 agttcagccc caaacttgcc agtctgtctg aaggcagtga cctttgggtg gaaaaagcac
     2401 ccttagggtt tctaacgctc gagcgatttt taccggcgcg cgcgctgtgg ctggtctcg
//
LOCUS       DATBNL010000183         3081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_82066, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000183 DATBNL010000000
VERSION     DATBNL010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82066"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VIC30_03030"
     CDS             complement(<1..268)
                     /locus_tag="VIC30_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEY7803392.1"
                     /translation="MDKFTVHKGLVAPLDRENVDTDLIIPKQFLKSIKRTGFGPNLFD
                     ELRYLDHGEPGMDNSKRPLNPDFVLNQSRYKGASILLARKNFGCG"
     gene            complement(280..1680)
                     /gene="leuC"
                     /locus_tag="VIC30_03035"
     CDS             complement(280..1680)
                     /gene="leuC"
                     /locus_tag="VIC30_03035"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEY7803393.1"
                     /translation="MNRTLYDKLWDAHVVHQEADGTAILYIDRHLLHEVTSPQAFEGL
                     EIAKRKPWRISANLAVADHNVPTENRAGGIADPISKLQVDTLDKNCEKFGVIEFKMND
                     LRQGIVHVIGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLLA
                     KKSKNMLVKVQGALPAGCTAKDVALHVIGQIGTAGGTGYAIEFGGSTIRDLSIEGRMT
                     LCNMAIEAGARSGMVAVDDKTVEYFKGRPFAPTGALWDAAVQYWRTLHSDEGAHFDRV
                     VEIDAAEIVPQVTWGTSPEMVLPVTARVPDPDKEKDATRRSGMERALAYMGLEPNTAI
                     TDIKIDKVFIGSCTNSRIEDLRAAAAVVRGKRVASSVKQAMVVPGSGLVKEQAEREGL
                     DKIFIESGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGQGGRTHLVSPAM
                     AAAAAVAGHFADVRTL"
     gene            complement(1805..2863)
                     /gene="aroC"
                     /locus_tag="VIC30_03040"
     CDS             complement(1805..2863)
                     /gene="aroC"
                     /locus_tag="VIC30_03040"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEY7803394.1"
                     /translation="MSGNSLGKLFCVTNFGESHGPAIGCVIDGCPPGMALDVADIQHE
                     LDRRRPGTSRHVTQRQEPDTVEILSGVFEGHTTGTPVALLIRNQDARSKDYSNIMDTF
                     RPGHADFAYWKKFDVRDPRGGGRSSARLTAPTVAAGAVAKKWLASTYGLQVRGVMSQL
                     GPIEIPFEGWEHVHNNPFFAGNISTIESLETYMDELRKAGDSIGARIEVVASGIPAGW
                     GEPIYDRLDADIAHAMMGLNAVKGVEIGAGFQSVTQRGSEHGDEITPDGFQSNNAGGV
                     LGGISTGQDITVSLAIKPTSSIRIERRSINRAGEPVSVKTLGRHDPCVGIRATPIAEA
                     LLAVVLMDHALRHRAQCG"
BASE COUNT          688 a          897 c          757 g          739 t
ORIGIN      
        1 tgccgcaacc aaagttttta cgcgccaaca ggatcgaagc acccttgtat cgtgattgat
       61 tcaacacaaa atccgggttt aagggcctct tgctgttgtc catgccaggt tcgccatggt
      121 caagatagcg cagctcgtca aacaagttcg gaccaaatcc agtgcgcttg attgacttta
      181 gaaactgttt agggatgatc aggtctgtgt cgacgttctc gcgatcgagt ggtgcgacca
      241 gccctttatg aacagtgaat ttatccatga gagttcctat caaagggtac gaacgtcagc
      301 gaaatgaccg gccacggctg ctgctgccgc catagcagga ctcacgaggt gggtacgacc
      361 accctgccct tgtcgtcctt caaagtttcg atttgacgtc gatgcacaac gctcaccagg
      421 ctcaagccga tcagcgttca tggccagaca cattgagcaa ccaggctcgc gccattcgaa
      481 accggactcg ataaagatct tatcaagacc ctcacgctcg gcttgctctt tgaccaagcc
      541 tgagccaggc accaccatgg cctgcttaac cgacgatgcc acccgcttgc cacgcaccac
      601 ggcagcagcg gctcgcaagt cttcgatgcg cgagttggtg catgagccga tgaatacctt
      661 gtcaatcttg atatctgtga ttgccgtgtt cggttcaaga cccatgtacg ccagcgcgcg
      721 ctccatacca ctgcgacgtg tggcatcttt ctctttgtct gggtcgggca cacgggccgt
      781 caccggcaac accatttcag gtgatgtgcc ccaagtgact tgcggcacga tctcggcggc
      841 atcaatttca accactcgat caaaatgcgc accctcatct gaatgcagtg tgcgccaata
      901 ttggacggcc gcatcccaaa gcgcacctgt cggcgcaaag ggtctaccct tgaaatactc
      961 aacagtcttg tcgtccacag cgaccatacc agaacgcgca ccagcttcga tggccatgtt
     1021 gcacagggtc atgcgccctt cgatcgacaa gtctcggatt gtgctgccac caaactcaat
     1081 ggcataaccc gtaccaccgg cagtgccaat ttgaccaatc acgtgcaagg ccacgtcctt
     1141 ggcggtacag ccagctggca atgcgccttg gaccttgact agcatgttct tgctcttttt
     1201 tgccagcaac gtctgcgtgg ccaacacatg ctcaacttct gaggtaccaa taccatgcgc
     1261 caatgccccg aacgcaccgt gggtgctggt gtgcgagtcg ccacaaacca ctgtcatgcc
     1321 cggcagtgtg gcgccttgct ctggtccgat aacgtgcacg atgccttggc gcaagtcgtt
     1381 cattttgaac tcaatgacgc caaacttttc acagttttta tctagcgtat cgacttgtag
     1441 ttttgaaata ggatccgcga ttcctccagc acggttttct gtgggcacgt tgtggtcggc
     1501 tacagcaagg ttagcgctaa tgcgccatgg tttgcgctta gcgatctcaa gcccctcaaa
     1561 agcttgcgga ctggtgacct cgtgcaacag gtgccggtca atgtataaga tcgccgttcc
     1621 gtcggcctct tggtgcacca cgtgtgcatc ccataacttg tcgtatagcg ttcggttcat
     1681 gattcaggtt tccacttgtg ttgacacaac atgcgtaaga gccagcgcct gaacggccta
     1741 gccaccactg cagctgcgta actggtcact aaaagtctaa cttcgcccga ttatgccacg
     1801 cgtgctaacc acactgtgca cgatgcctta gtgcatggtc cattagcacc acagccaata
     1861 gagcctcggc aattggggtg gcacgaatgc ccacgcaggg atcatgtcga cccagtgttt
     1921 tgaccgaaac aggctcaccg gcacgattga tcgagcgacg ctcgatccgg atactcgatg
     1981 tgggtttgat cgccaagctc accgtaatat cttgccctgt ggaaatcccg ccaagcacgc
     2041 caccggcatt gttactctga aatccatctg gcgtgatttc atcaccgtgc tcagagccac
     2101 gctgcgtcac actttgaaac ccagcgccga tttctacacc tttgactgcg tttaagccca
     2161 tcatggcgtg cgcaatgtcc gcatcaagtc gatcataaat aggctcaccc cagccggctg
     2221 gaataccgga ggcaaccact tcgatacgtg caccaataga atcaccggct ttgcgcaact
     2281 cgtccatgta tgtctcaaga gactcgatag tggagatgtt gcccgcaaaa aacgggttgt
     2341 tgtgcacgtg ctcccagcct tcaaaaggta tttcaatcgg cccaagctgg ctcatgacac
     2401 cccgcacctg aagaccatag gtactggcca accatttttt ggcgactgcc ccggcggcca
     2461 cggtcggtgc cgttagtcgc gccgatgatc tgcccccacc acgcggatcc cggacgtcga
     2521 attttttcca ataggcaaag tcggcgtgac cgggcctaaa tgtgtccatg atgttgctgt
     2581 agtctttgct gcgtgcatcc tgatttcgaa tcagcaatgc caccggtgtg ccggtggtat
     2641 gcccctcaaa tacaccagag agaatttcga cagtatcggg ttcctggcgc tgagttacat
     2701 gacgcgacgt cccgggacgc cgacggtcaa gctcatgctg aatatcagca acatcaagcg
     2761 ccattccagg cggacagccg tctatcacgc aaccgatggc tgggccatgc gattccccaa
     2821 aatttgtgac acaaaataac tttccgagcg aatttccaga catggcgatg atttaagatc
     2881 gaaacgaatc gataacaaac ggtgaaaata aaaggtttag tgctcattat ggcaccaagt
     2941 cttaggtggc actcgctgcg aaagcttttt atcaaccctt tagcggcttt ttgcctcggt
     3001 ttttgcctcg gttttactga gcttttgggg tttctttggc ctctttggcc tctttggcct
     3061 cttttgcctc ttttgcctct t
//
LOCUS       DATBNL010000184         1521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_62008, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000184 DATBNL010000000
VERSION     DATBNL010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62008"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /locus_tag="VIC30_03045"
     CDS             complement(<1..894)
                     /locus_tag="VIC30_03045"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY7803395.1"
                     /translation="MVVKAHKKRVVWSLLLVVLLAAVIRALVVALPSDQITIYSGPVG
                     GTFYNMALTYREALQAAGYSVTIKPSESTAQLLERVNGSDAPNSIGFLMGSYDHSSYP
                     RVQSLGFVDQQPLFLFYSAAFGEMVSLATLKGRRIVLPPKDSITAQTALNLLSQYNIN
                     QQNTEIQFMPFQQAVSDLQAGQAYAMFLMLGAEHRAVNRLMNDPNLRAFSYRNTSGLL
                     KKLKDLGEVTIAPASYDVLRQIPAKTLNLLAARVEIIANDRLDSAAAYALLNVFENLH
                     HRATLTNSVDAFPSFSGLLAPP"
     gene            complement(894..>1521)
                     /locus_tag="VIC30_03050"
     CDS             complement(894..>1521)
                     /locus_tag="VIC30_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803396.1"
                     /translation="AVRLTPALVSAIYRGQIRYWRHPEIVRINADLLLPDLAITPVSR
                     LGSSGSTYSLTRYLTMSDVAWAKELGMSDRPDWDYGLLAKGALELRDIVMSTPGAIGY
                     WLLDPASRDLTVSVHLGYPELGFSTPPLDSGTLGQWPLTTTVYVVVNPQNSSNGGTKP
                     SVIRFFERGLTQWQQTTRRAGYVPLDSDRLAGVMAIWQRHGLSSGATW"
BASE COUNT          402 a          412 c          382 g          325 t
ORIGIN      
        1 tggcggtgcg agcaacccag aaaagctcgg aaaagcatca accgagttgg tcagtgtcgc
       61 acggtgatga aggttctcaa acacgttcaa caacgcataa gctgctgctg aatcgagacg
      121 atcattggcg atgatttcta cccgagcggc cagcaaattc agtgtcttag ccggtatctg
      181 ccgaagcaca tcgtagctcg caggagcaat tgtcacctcg ccgaggtctt taagcttctt
      241 tagtaaaccg ctggtatttc gatatgagaa tgcccgcaga ttcggatcat tcattagacg
      301 gttgacagcc ctatgttctg cgcccaacat caaaaacatg gcataggctt gaccagcctg
      361 caaatccgac actgcctgct gaaatggcat gaactgaatt tcagtgtttt gctgattgat
      421 gttgtattgg ctcaacaaat tcaaggctgt ttgcgcagtg atgctgtctt tgggtggcaa
      481 aacgatacga cggcccttaa gtgtcgctag gctcaccatc tcaccaaagg cagcgctgta
      541 aaacagaaac aatggttgct ggtctacaaa acccaacgac tgtactcggg ggtagcttga
      601 gtggtcatat gaccccatca gaaagccaat gctattgggc gcatcgctgc cattgactct
      661 ctctaatagt tgagcggtgc tctcggaggg cttgattgtg acgctataac cagcggcctg
      721 tagcgcttcg cggtaagtca acgccatgtt gtagaacgtg ccgccgaccg ggccgctgta
      781 tatggtgatc tgatctgaag gcaatgcaac caccaatgca cgaatgaccg cagctaacaa
      841 caccactagc aataaagacc aaaccacgcg ttttttgtgc gccttaacga ccatcaccaa
      901 gttgctccac ttgatagacc atgccgctgc cagatggcca tcacaccagc caagcgatca
      961 ctgtccaacg gtacataacc ggcacgtcta gtcgtttgct gccactgagt caacccgcgc
     1021 tcaaaaaaac ggatcacaga tggcttggtc ccaccgtttg atgagttttg tggattcaca
     1081 accacataga ccgtggtagt cagtggccac tgacccaacg tacctgagtc tagaggcggg
     1141 gtggagaacc caagctctgg gtagccaagg tggacactaa cggtcaaatc gcgcgacgca
     1201 gggtcaagta accagtaccc gatcgcaccg ggcgtagaca tcacaatatc ccgtaactcc
     1261 aaggcaccct ttgccaataa accataatcc caatcggggc gatcactcat gccgagttct
     1321 ttagcccaag ccacatcact catggtcaag taccgcgtca aagagtacgt cgaacctgaa
     1381 ctacccaagc gagacaccgg cgtaatcgct aggtcaggga gcaagaggtc ggcattgatc
     1441 cgaacaatct cgggatgacg ccaataacgg atctgaccac ggtagatggc tgagactagc
     1501 gccggcgtga gccgaacggc t
//
LOCUS       DATBNL010000185         3460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_32138, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000185 DATBNL010000000
VERSION     DATBNL010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32138"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..170
                     /locus_tag="VIC30_03055"
                     /pseudo
     CDS             27..170
                     /locus_tag="VIC30_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011488437.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
     gene            163..2217
                     /locus_tag="VIC30_03060"
     CDS             163..2217
                     /locus_tag="VIC30_03060"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY7803397.1"
                     /translation="MLKKTDAAKIPAELIGSSPVRPDGVPKVTGMAQYGADYALPGML
                     WGKVLRSPHAHARIVSIDTSRAQALPGVKAVMTAADMPDQDFTYQGPERVQVNFWHMT
                     RNVMAREKVLFAGHPVAAVAATTEAIAREALGLIAVKYEVLPHVIDVDQAMQDDAPLL
                     FEDMITRGNEQAKPSNVSRVKTFQAGDLEAGFAKADEIVELSFKTEPVHQGYIEPHAA
                     LARWGADGQSEVWSSSQGHFVVRAFTAQLLGLNVSDVVVHPAEIGGGFGGKTLVYLEP
                     LALTLSKLTGHPVKMVMTREEVFEATGPTSGSSMTVKMGVTRDGTIVAADGTFKLQAG
                     AFPGSPVLNAAMCAFSVYEIENARAVAYDVVSNRPKAVAYRAPGSPIAAFAVESVVDE
                     LARRIGMDPIDLRLKNAVEPGSSTIWGPKHAHGGYRETLEALKNHPAYQQPLGPNQGR
                     GVASGFWFNGGGESAATVHVAEDGSIALATGSMDVGGSRASMALMAAETLGVPYTSVR
                     STVSDTASIGYNHVTGGSRVTYATGMAVVQACRKVIHDLRSRAAMIWDVDVDHVVWDN
                     GAAKPASAEVGDFAPLTLKEIAAKRSVTGGPIVAEVAINAGGQAPGFSSQFCDVEVDP
                     ETGAVKVLRYVAAQDVGRAIHKRYVEGQIEGGVVQGIGWALNETYIYNDKGHLENAGF
                     LD"
     gene            2227..2469
                     /locus_tag="VIC30_03065"
     CDS             2227..2469
                     /locus_tag="VIC30_03065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803398.1"
                     /translation="MASDLPMIEALIVEVANPNHPFGVKGVGEVNIVPVMAAMANAIR
                     DATDVRLTALPMSPPAVLAALEDSGANVRMNEAVSA"
     gene            2462..2740
                     /locus_tag="VIC30_03070"
     CDS             2462..2740
                     /locus_tag="VIC30_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803399.1"
                     /translation="MPESVFEPGQGVVKVTLAGAFEPLTTEPQTFDLTVSNVRGVLRE
                     LDARFPGLAALLEEESAVAIDGVIHEIIYTQPLAPGTEIYFIPRLESG"
     gene            complement(2800..>3460)
                     /locus_tag="VIC30_03075"
     CDS             complement(2800..>3460)
                     /locus_tag="VIC30_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020423786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803400.1"
                     /translation="TVEAGTTTAVVGRSGAGKSTLSRLLFRFYDVDEGRIMLDGQDLR
                     EVTQASLRAAIGIVPQDTVLFNDTIGYNIQYGRPDATEAEVHAAARAAQLESFIERLP
                     QGYDTPVGERGLKLSGGEKQRMAIARTLLKQPAMLMFDEATSALDSRTERALQGELWK
                     LARNRTTLIIAHRLSTIVHADQILVVDHGEIIEQGTHESLLAKQGTYAQMWQMQQSQA
                     Q"
BASE COUNT          713 a          911 c         1056 g          780 t
ORIGIN      
        1 gagcagccac taagaggcct ggctagttgc taaagcatca tcccgatccg tcagaagagc
       61 aggtgcgcta ttggttggct ggtaatttgt gccgttgcac cggttacaac aagatcatcg
      121 aagccgtgct tgcggcagca cgagaaatgc gggagacaca acatgcttaa aaaaaccgac
      181 gcagccaaga tccccgctga gttaattggt tcgagcccgg tgcgcccgga cggcgtgccc
      241 aaggtcaccg gcatggccca gtacggggcg gattacgcct tgcctggcat gttgtggggc
      301 aaggtcttac gctcgccgca tgcgcatgcc cgcatcgtgt cgattgatac tagtcgtgcg
      361 caagcattgc ctggcgtgaa agccgtgatg accgcagccg acatgccgga tcaggacttt
      421 acctatcagg ggcctgagcg cgtgcaggtc aatttctggc acatgacgcg caacgtgatg
      481 gcgcgcgaga aagtgttgtt tgccggtcat cccgtggcag ctgtggctgc aacgacggag
      541 gccattgcgc gcgaggcgtt ggggcttatc gcggtgaagt acgaggtctt gccacacgtc
      601 atcgatgtcg atcaagccat gcaagacgat gcgccgttgc tgtttgaaga catgatcacg
      661 cgcggcaacg aacaggccaa gccgtccaat gtctcaaggg taaaaacttt tcaagcaggg
      721 gacctcgagg ctggctttgc caaggcagac gagatcgttg agttaagctt taagactgag
      781 cccgtgcatc aaggctatat cgagccgcat gcggcattgg cacgctgggg cgcggacggt
      841 cagtccgaag tctggtcttc tagtcaaggc cactttgtgg ttcgggcatt taccgcccaa
      901 ttattgggct tgaacgtcag tgacgtggtg gtgcatccgg ctgaaattgg tggtggtttt
      961 ggtggcaaga ccttggtgta tttagagcca ctggcgctga cgctttctaa actcacgggt
     1021 catcccgtga agatggtcat gacccgtgag gaagtgtttg aggccacagg cccaacctct
     1081 ggctcatcga tgaccgtcaa aatgggtgtc acacgcgatg gcacgattgt ggccgccgat
     1141 ggcacattta agttgcaagc cggtgccttt cctggttcgc cggtgttaaa tgccgccatg
     1201 tgtgccttct cggtctacga aatagaaaac gcccgcgccg tggcgtatga cgtggtcagt
     1261 aaccggccca aggcagtggc gtatcgtgcg cctggctcac cgattgccgc ttttgctgtg
     1321 gaaagtgtgg tcgatgagtt ggcgcgccgt atcggcatgg acccgatcga tttgcgtcta
     1381 aagaacgcag tcgaacctgg ctcatcgacc atttggggac ccaagcacgc tcacggtggg
     1441 tatcgcgaga ccctggaagc acttaagaat catccagcct atcaacagcc gcttgggccc
     1501 aatcagggca ggggcgtggc atcagggttt tggtttaacg gcggtggtga gtcggctgcc
     1561 actgttcacg tggctgaaga tggctcaatt gccttggcca ccggcagcat ggacgtgggt
     1621 ggttcgcgcg cctcgatggc cttgatggct gccgaaacac ttggcgtgcc ctacacgtcg
     1681 gtgcgttcaa ccgtctcaga caccgcctcg attggctaca accatgtcac cggtggttcg
     1741 cgcgtgacgt acgccactgg catggccgtt gtgcaagctt gtcggaaggt catccatgat
     1801 ctgcgttcgc gtgcagccat gatttgggat gtcgatgtcg atcatgtcgt gtgggacaac
     1861 ggtgcagcca agcctgcaag cgctgaggtg ggtgacttcg caccactgac cctaaaagag
     1921 attgccgcca agcgatcagt cacgggtggc ccgattgtgg ctgaagtggc catcaacgcc
     1981 ggtggtcagg cgccaggatt ttctagccag ttttgtgatg tggaagtcga tcccgagacc
     2041 ggtgcggtca aggtactgcg ctatgtggct gcgcaagacg tcgggcgtgc cattcacaag
     2101 cgttatgtcg aagggcagat cgaaggcggt gtggttcagg gcattggctg ggccttgaat
     2161 gagacctaca tttacaacga caaagggcac ttagagaacg ccggattttt agattaacga
     2221 gtgccggtgg cgtctgacct gccgatgatc gaggcgctca ttgttgaggt cgccaacccc
     2281 aatcatccat ttggtgtcaa aggagtgggt gaggtcaata ttgtgccggt catggcggcc
     2341 atggccaatg ccattcgtga tgccacggat gtgcgcctga ccgcattacc catgtcacca
     2401 ccggcggtgc ttgcggcttt ggaagactcg ggtgccaatg tgcgtatgaa tgaggcagtc
     2461 agtgcctgag tcagtgtttg agccgggcca aggcgtggtc aaagtcaccc tagcgggtgc
     2521 ctttgaacca ctgaccacag aaccccagac atttgatctg acagtctcta acgtgcgagg
     2581 cgtgttgcgc gaacttgatg ccaggtttcc tggcttagcc gccttgctcg aagaagagag
     2641 tgcggtggcc atcgatggtg tgatccatga aatcatctac acccaaccat tggcccctgg
     2701 caccgagatt tacttcattc cgcggcttga aagcggttaa gcgatagctg ttaagtgcta
     2761 gtttttaagt gctggtggct aagcaccgac gggtaaccac tactgggctt gagattgttg
     2821 catctgccac atctgagcgt acgtgccttg tttggcgagc agtgattcgt gggtgccttg
     2881 ctcgatgatt tcgccatgat cgaccaccag aatctgatcg gcatgcacaa tggtcgagag
     2941 acgatgcgca atgatcaggg tggttcggtt acgggcaagc ttccagagtt cgccttgtaa
     3001 ggcccgctcg gtacgtgagt caagcgccga agtggcttcg tcaaacatca gcattgccgg
     3061 ttgtttgagc aaggtgcgtg caatggccat gcgctgtttt tctccgccag ataatttcag
     3121 acctcgttcg ccaaccggcg tgtcgtagcc ttgtggcaag cgctcaatga agctctcgag
     3181 ctgcgcggct ctcgccgcgg cgtgcacctc agcctcagtg gcatcgggtc ggccatattg
     3241 aatgttgtaa ccaatcgtgt cgttaaataa aacggtgtct tgtggcacga tgccaatggc
     3301 cgctctcaag ctcgcttgtg tcacttcacg caggtcttga ccgtcgagca tgatgcgacc
     3361 ctcatcaaca tcgtagaaac gaaacaacaa gcgcgacagc gtacttttac ccgcgccaga
     3421 gcggccaacc acagcggtgg tggtgcccgc ctcaaccgta
//
LOCUS       DATBNL010000186         3330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52159, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000186 DATBNL010000000
VERSION     DATBNL010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52159"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..805)
                     /gene="fabG"
                     /locus_tag="VIC30_03080"
     CDS             complement(71..805)
                     /gene="fabG"
                     /locus_tag="VIC30_03080"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEY7803401.1"
                     /translation="MKLTDKTALVTGASRGIGKAIAIELAAKGANVIGTATSESGAQA
                     ITEMLQAQGGQGIVLNVNDAQRITEVIDDLAKQGGPHILVNNAGITRDMLAMRMKDED
                     WDAVLQTNLSSVFKLCRAVMKPMMKARVGRIINVTSVVGSSGNAGQANYAAAKAGVAG
                     MTRALARELGSRNITVNCVAPGFIETDMTRALSTDQTASLLAQIPLGRLGAPADIAYA
                     VAFLASDEAEYITGTTLHVNGGMYMS"
     gene            complement(892..1821)
                     /gene="fabD"
                     /locus_tag="VIC30_03085"
     CDS             complement(892..1821)
                     /gene="fabD"
                     /locus_tag="VIC30_03085"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEY7803402.1"
                     /translation="MKFAFVFPGQGSQSVGMLDAWAGNAAVAEVISVANESLGEDLGA
                     LMADGPADALNLTTNTQPAMLTASFAMWRAWQAAAGPTPSIMAGHSLGEYTALAAAGT
                     LELSDAVRLVRIRADAMQAAVPVGTGAMAAILGLEDDAVLAACERAQQGDVVEAVNFN
                     APAQVVIAGDKAAVERAMDNAKAAGAKRALLLPVSAPFHSSLLKPAAAVLSEALSKIE
                     LKTPRIPVIHNVDVQMHEDSLAIRQALVDQAWHPVRWVQTIEAMAAEGVTHVIECGPG
                     KVLGGLVKRISPAMTGMSITDPASMQAALDALQ"
     gene            complement(1910..2896)
                     /locus_tag="VIC30_03090"
     CDS             complement(1910..2896)
                     /locus_tag="VIC30_03090"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEY7803403.1"
                     /translation="MTGSAVFSKITGTGSYLPESVVTNDELAARLAKQGVETSDDWIV
                     SRTGIRQRHIADDSMHTSDLAARAAQAALDAAGKTAADVDLIIVATSTPDYVFPSTAC
                     LVQAKIGNHGAAAFDVQAVCSGFVYALTTADSFIRASRAKCALVIGAEIFSRILDWQD
                     RGTCVLFGDGAGAVVLEGSSEPGIRAAQLHADGSLTGILCVPGNVAHGQVTGDPFLRM
                     DGQAVFKQAVSVLEKSARDTVAEAGLEMSDVNWLIPHQANLRILTFLAKKLGGSMDKV
                     VVTLDQHANTSAASVPLALDQACRDGRVKPGHEVLMQGVGGGFTWGSVLARM"
     gene            complement(2932..>3330)
                     /locus_tag="VIC30_03095"
     CDS             complement(2932..>3330)
                     /locus_tag="VIC30_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEY7803404.1"
                     /translation="GNVEGNDIFKGTVDVVVCDGFVGNVVLKSVEGLAHMLGSMIREE
                     FYRSTLTRLAGLVVRPVLNRFRRRVDNRRYNGAALLGLRGIVFKSHGSADDYAFRHAL
                     QRAHDAAAIDLLDRISSSVLALTSHQDRSA"
BASE COUNT          807 a         1034 c          780 g          709 t
ORIGIN      
        1 atgctttcca ttcatatctc cagtggggaa aaaacttgtt gaattatagc caagcgcagc
       61 ccaaaacggg ctacgacatg tacatgcctc cgttgacatg caacgtagtg cctgtaatgt
      121 actctgcttc gtcgctcgcc agaaatgcga cggcgtatgc aatatcggcc ggcgcaccta
      181 gccgacccaa cggtatctgc gcgagcaagc tcgccgtttg atcggtcgac agcgcacggg
      241 tcatgtccgt ttcaataaaa ccaggtgcaa cacaattgac cgtaatattg cggcttccca
      301 gctctctggc cagtgctcgc gtcatgccag ccacaccagc cttggccgcc gcgtagttgg
      361 cttgaccagc gttaccgctt gaaccaacga cagaggtgac gttgatgatt cgaccgactc
      421 gcgccttcat cataggcttc atgacagcac ggcaaagctt aaacacgctg cttagattgg
      481 tttgcaaaac cgcatcccag tcttcatctt tcatgcgcat ggcgagcata tcacgcgtaa
      541 taccggcgtt attcaccaaa atatgaggcc caccttgctt ggccaagtca tcaatgacct
      601 cggtgatgcg ttgagcatcg ttgacattga gcacaatgcc ctgcccgcct tgagcctgta
      661 gcatctcggt aatggcttgg gcaccagact cgcttgtcgc agtgccaatg acgtttgcac
      721 ccttagccgc aagctcgatt gcaatcgcct taccaatacc tcgacttgca ccagtcacta
      781 aagcggtttt gtcggttaat ttcatctgtt ctcaactacc catcttaaaa agttgccccg
      841 cgtttcagaa cctgtcgcca cgataacgct taaattgtat ccagagcgac attattgcaa
      901 tgcatcaagc gctgcctgca tggatgccgg atcagttata gacatgcctg tcatcgctgg
      961 ggaaatccgt tttaccaaac cgcccagtac tttaccggga ccacattcga tcacgtgcgt
     1021 cacaccttca gcagccatcg cctcgatggt ctggacccag cgcactgggt gccaggcctg
     1081 atccacaagc gcttgcctaa ttgcgagcga atcctcgtgc atctgcacat caacgttatg
     1141 aataacggga atacgcggcg tcttgagttc aatcttgctt agtgcctcag acaacactgc
     1201 tgcagcaggt ttaagcaggc ttgagtgaaa cggcgccgat accggcaaca acaacgcacg
     1261 cttggcgcct gcggccttgg cattgtccat ggcacgctca acagcagctt tgtcacccgc
     1321 gatgacaacc tgtgcgggtg cattgaagtt cacagcctcg accacatcac cttgctgcgc
     1381 tctctcgcac gcagctaaca cagcgtcgtc ttcaaggcca aggatagcag ccatcgcacc
     1441 ggtacccacc ggcaccgcgg cctgcatggc atcggcacga atccgaacca agcgaaccgc
     1501 gtcggacaat tcgagcgtac cagcggcggc cagtgcagtg tactcaccca gactatgccc
     1561 agccatgatg ctcggtgttg ggcctgcggc agcctgccag gcacgccaca tggcaaacga
     1621 cgccgttaac atggctggct gtgtattggt cgtcaggttc aaagcatcag cagggccatc
     1681 ggccatgagc gcaccgagat cctcgcccag agattcattg gccacagaaa tcacctcagc
     1741 gactgcggca ttgccagccc aagcatccaa catacccact gactgcgagc cctgaccggg
     1801 aaacacaaaa gcaaacttca ttcgttcgtc ctctaccctt tacttacgta ttcgtccttc
     1861 tacttgtacc aacatgacac ggaccttttg aactggtctc gtcctttgcc tacatccttg
     1921 ccagtactga accccaagtg aacccgccac cgacgccttg catcagcact tcatggcccg
     1981 gtttaacccg tccatcgcgg cacgcctgat ccagtgccag tggcacactg gcggccgacg
     2041 tgttggcatg ttgatcaagg gtgaccacga ccttgtccat cgacccaccg agttttttgg
     2101 ccagaaaggt caatatgcga aggttggctt gatgcggaat caaccagtta acatccgaca
     2161 tctccagacc cgcttctgct actgtatcgc gcgcagactt ctctagcacc gagacggcct
     2221 gtttaaagac cgcctgacca tccatacgca aaaacggatc cccggtgacc tgaccgtgtg
     2281 ccacattgcc aggcacacac aaaattccgg tcaaacttcc gtcggcgtgc aattgagcag
     2341 cccggatgcc aggctcgctc gaaccctcca gcacaacagc gccagcacca tcaccaaaca
     2401 acacacaagt gcctcggtct tgccagtcca ggattcgcga aaaaatttca gcgccaatga
     2461 ctaaagcaca tttagctcga gacgcgcgaa taaaactatc tgccgtggtt aacgcataaa
     2521 caaacccgct acaaaccgct tgcacatcaa aagccgccgc accatgattg ccaatcttgg
     2581 cttgcaccaa acaggcggtg ctcggaaaca cataatcggg tgtggaagta gccacgatta
     2641 tcaagtctac gtcagcggcc gtcttgcccg cagcatcaag agctgcctgc gctgcgcgag
     2701 ccgccaaatc actggtgtgc atgctgtcgt cagcaatgtg acgctgtcgg atacccgtac
     2761 gcgacacgat ccagtcatcc gaggtttcta cgccttgctt agccagccgg gcggccaatt
     2821 catcattggt taccactgac tcgggcagat agctgcctgt gccagtaatc ttagaaaaca
     2881 ccgctgaacc tgtcatgaat tcctcttttc cgtgggaccg aaacacgtct gtcaggcaga
     2941 ccggtcctga tgactggtca acgccaaaac cgaactagag attcgatcga gcaaatcaat
     3001 tgctgctgca tcatgggctc gctgcaaggc gtggcgaaac gcgtaatcat cggccgaacc
     3061 gtggctctta aacacaatac cgcgtaatcc cagtaaagca gcgccgttgt agcggcgatt
     3121 atcgacccga cgcctgaaac ggttcaacac gggccgcaca accagtcctg ccaaacgtgt
     3181 aagcgtactg cgataaaact cttcacgaat catactgcca agcatgtgtg caaggccttc
     3241 aactgacttc agcaccacgt tgcccacaaa accatcacag accacgacat caaccgttcc
     3301 cttaaaaatg tcattgcctt cgacattgcc
//
LOCUS       DATBNL010000187         3090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_32142, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000187 DATBNL010000000
VERSION     DATBNL010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32142"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VIC30_03100"
     CDS             <1..199
                     /locus_tag="VIC30_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803405.1"
                     /translation="CDWYDEARYRLRAGLAPEIKRIGDIARETVQEMQTLMASGRGKR
                     IYALRAQLPGLTRRGDAKLTR"
     gene            279..425
                     /locus_tag="VIC30_03105"
     CDS             279..425
                     /locus_tag="VIC30_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803406.1"
                     /translation="MKPADLLAHIDSGQPWPWPTGAIADGDLDRAYQIALEVRSPRAA
                     CGVR"
     gene            385..987
                     /locus_tag="VIC30_03110"
     CDS             385..987
                     /locus_tag="VIC30_03110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HEY7803407.1"
                     /translation="MKLDPRVRRAACGEKPAGIKIGFTNRTIWPVYNVHVLIWGTVWD
                     STVHHFEGEGVASITGLCQSRIEPEVVFGLRQSPGANPSMQDLFDAIEWVAPGFELVQ
                     SHLPDWRFVISGTAADSGLHGQLWIGQKIAVRELAQNATDLARRLASAKVELFCNDAK
                     LHDGQGANVLDSPLHALFHACQVLTKCPGAPELVAGDVIT"
     gene            1086..1327
                     /locus_tag="VIC30_03115"
                     /pseudo
     CDS             1086..1327
                     /locus_tag="VIC30_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013517044.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
     gene            complement(1510..>3090)
                     /locus_tag="VIC30_03120"
     CDS             complement(1510..>3090)
                     /locus_tag="VIC30_03120"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEY7803408.1"
                     /translation="PAAPREGPALNVPPLPEPSTAPTAEFTVKQFTFTGNTKVRSATL
                     EAALAEFLNRPIQFKDLQEATNVVADTYAKQGWLARAFIPRQDITEGTVRIHIIEAVY
                     GGSKIQGEFNHASSERIQATVDDQNIEGQVLSLADVERGLLLADDLPGVSVVGSLTAG
                     ENTQETDVLISVEDTPWITGRIQVDNQGNKSTGENEVSINTAINGLTGHADQLTAYGL
                     YTEGLTFVSVGYSVPLSYRGLRLGASYSTLGYRIVDDQLFTSGQDRGTGFANTWGLEA
                     TQPLIRSRNTNVLARLGYTNKLFDNRIGQVTTSEYNVDVVSLNLTGTHLDSLGGGGYT
                     TLSLNPSIGSVDYGLSPQYQRIIDATTQSEGQYAKLRYGISRQQNLPANLSIYANFRG
                     QIASKNLDSSERFYLGGPYGVRAYPNNEGGGSQGNLFSFEVRYNLMPELQFAAFYDIG
                     EVQVNKFNDHVAAADPNTGTLQGAGLSVSWNAPYNIILNATWAMRIGGNPFTNDPSQN
                     QDGSSSSSRFWLNASIGF"
BASE COUNT          649 a          815 c          911 g          715 t
ORIGIN      
        1 gtgcgactgg tatgacgagg cacgctacag attgcgtgca ggacttgcac ctgaaattaa
       61 acgcattggc gacattgcac gagaaactgt gcaggaaatg cagacactga tggcgagtgg
      121 gcgtggcaag cgtatatacg ccctgcgtgc ccagctaccc ggcttgactc ggagagggga
      181 cgccaaactt actcgttagt attacgtgta cagtttccgg cgtgctaaac aaatggcgtt
      241 cgtttaaaaa ttggacgtga ttaacaaggg cttcccctat gaaaccagca gacttgcttg
      301 cacatattga cagtggccag ccttggcctt ggccaaccgg cgcgattgcc gatggcgatc
      361 ttgatcgtgc ctaccaaata gcgcttgaag ttagatcccc gcgtgcggcg tgcggcgtgc
      421 ggtgagaaac ccgctggcat aaaaatcggt tttactaacc gcacgatctg gccggtctat
      481 aacgtgcacg tactcatctg gggtacggtc tgggatagca ccgtgcatca ttttgagggt
      541 gagggtgttg cttcgattac cggattgtgt cagtcacgta tcgaacctga agtggtgttt
      601 ggcctgcgac agtctccagg cgctaaccca agcatgcaag acctctttga tgctatcgag
      661 tgggtggcgc ctggttttga gttggtgcaa agtcatctgc ctgactggag gttcgtcatt
      721 tcaggcaccg cagccgatag tggcttgcat ggccagttgt ggattggcca gaaaattgcg
      781 gtgcgcgagc tggcacaaaa tgcaaccgac ctagctcgcc gcttggcatc ggcgaaagtt
      841 gagctctttt gcaatgacgc taagttgcat gatggccagg gcgccaatgt gcttgatagt
      901 cccttgcatg ccttgtttca tgcctgccag gtattaacca aatgccctgg tgcgccagag
      961 ctggttgcgg gcgatgtgat tacataaggg gtaggtcggc actgtgcact agcctcgctg
     1021 tcaagtaagg tcaggattcg atacagcttg cgataagcaa cccagatgta gtttgacgtc
     1081 accccctgca agaacagatc caggaagccg tgactaaggg ctgtgcgcca tttgacgccg
     1141 attattggtt aaataagacc gtgcgggtgg gttccctgat tatgtccata aggcactcgc
     1201 tgacgctgga tggctcggca ttgccatgcc gaaagctcat ggtggggcag ggcttggcat
     1261 caccgaagcc gccatcatga tgcacaccat ctcagccact ggtgctggct tatcaggtgc
     1321 ttcagcgggt atcgggtctg tgagcgtgcc atcttcaccc aaggcggcat gggccacgct
     1381 cgtgagtaac acgtcgagcg ctacatacgc gaggcttggc ttcctcgcct ggcaccggta
     1441 agtccgcaac tgattctttg ttttatcgta gaaaaaagtg ctgggcctgt cgcgttctta
     1501 ctgaaatttc tagaacccaa tgctggcatt taaccagaag cggcttgatg acgagctgcc
     1561 atcctggttc tgtgacgggt cgttggtaaa cggattgccg ccaatgcgca tggcccaggt
     1621 ggcgttcaga atgatgttgt aaggcgcatt ccacgacacg cttaagcccg cgccttgcaa
     1681 ggtaccggtg ttggggtcag cggcagcaac gtggtcgtta aacttgttaa cctgcacttc
     1741 cccaatgtcg tagaaggcgg caaactgcag ctctggcatc aggttgtagc gcacctcaaa
     1801 cgagaacaaa tttccctgtg agccaccgcc ctcgttgttg gggtatgctc tgacgccata
     1861 agggccaccg agatagaagc gctcagacga atcgaggttc ttgctggcaa tctggcctct
     1921 gaagttggcg tagatcgaga ggtttgccgg caggttctgc tggcgcgaga tgccatagcg
     1981 cagcttggcg tactgacctt cagactgcgt ggtggcatca ataatgcgct gatactgcgg
     2041 cgagagccca tagtccacac tgccaatgct ggggtttagg ctcagcgtgg tgtagccgcc
     2101 gccaccgaga ctatcgaggt gggtgccggt caagttcagg ctcaccacat cgacgttgta
     2161 ctcgctggtg gtgacttgcc caatgcggtt gtcaaacagc ttgttggtgt aaccaagtcg
     2221 tgctagaacg ttggtattgc gcgagcggat cagcggctgg gtggcttcca agccccaggt
     2281 gttggcaaat ccagtgcccc ggtcttggcc ggaggtaaag agctggtcat ccacaattcg
     2341 atagcccagg gtgctgtagc ttgcaccgag ccgcaagccc cggtagctta gaggcacgct
     2401 atagcccaca ctcacaaagg tcaggccctc tgtgtaaagg ccataggccg ttaactgatc
     2461 ggcatggccg gtcaggccat taatcgccgt gttgatgctg acctcgttct cgccagtcga
     2521 cttgttgccc tgattgtcca cctggatacg accagtgatc cagggcgtgt cctcgacgct
     2581 aatcaacaca tcggtttctt gggtgttctc gccagcggtt aatgagccga ccactgaaac
     2641 gccaggtagg tcgtcggcca gcaacaggcc acgctcaaca tcagccaatg acagcacttg
     2701 gccctcgata ttctggtcat cgactgtggc ctggatgcgc tcgctagagg catgattgaa
     2761 ctcgccctga atcttgctgc caccatagac cgcttcaatg atatgaatcc tgaccgtgcc
     2821 ttccgtaata tcctggcgcg gaataaaagc cctggccagc cagccttgct tggcgtaggt
     2881 atcggccacg acgttggtgg cctcttgcag gtctttaaac tggatcgggc ggttgaggaa
     2941 ctctgccaaa gccgcttcca aggtggcact gcgaaccttg gtgttgccag tgaaggtgaa
     3001 ctgcttgacc gtgaactcgg ccgtgggggc cgtagatggc tcaggcaacg gcggcacgtt
     3061 taacgctggg ccctcgcgcg gtgcagctgg
//
LOCUS       DATBNL010000188         2608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52169, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000188 DATBNL010000000
VERSION     DATBNL010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52169"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VIC30_03125"
     CDS             complement(<1..647)
                     /locus_tag="VIC30_03125"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY7803409.1"
                     /translation="MLLIVSGLTATAPDTLAQMSPSDFETPEFYANWGLDPIRAQYAW
                     SQGFTGTGVRMAIVDSPIQLSHPEFAGRVWGEIPSNQFPVPGVPIPFHGTHVMGLAGA
                     ARNGVGMMGSAFDAELVGVVNGELNTAGYYGITNWGPAVVVSGASVMNGSFVSQAQPQ
                     RVVNNALNPNWVIVDYLAVRLELVDAYFDNIDFMAKSDVVMVFSAGNDRALRNTSG"
     gene            1384..2355
                     /locus_tag="VIC30_03130"
     CDS             1384..2355
                     /locus_tag="VIC30_03130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803410.1"
                     /translation="MIQVKRIPYWFINAMGCLALLLGWQMAGAATKEPTAQTIEVGAF
                     VNDISNLDVTKGTVTLDLYLWIVSPTPFDAKTGFEIINGTGTVRLVETRHRDDGKSYQ
                     LLRIVADSKQRYDLRDYPFDQQTLALEFDFDPSSEATSLDVTADVSNSALASNITLPG
                     WRVSDLTVNADRQTYPTSWGSVIHEQSDLSYPQFTVSVQAERETLVYLVRYFSVIIFA
                     GLLAMLGLFLKPSETTRISLGIGAYISLSASSLVIANKLPVTDALNFSDHIILVTGAV
                     ILATVLYSLTTYHLYSKTPAKAGTIDRIARIIFPIAWLSALAIIFNL"
     gene            complement(2423..>2608)
                     /locus_tag="VIC30_03135"
     CDS             complement(2423..>2608)
                     /locus_tag="VIC30_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803411.1"
                     /translation="SFATGPDFTVSSAAMARDSAVIEVGIGASLGPSSRLNVVYATTL
                     SGQTSSQMLQAQLQWWF"
BASE COUNT          680 a          718 c          589 g          621 t
ORIGIN      
        1 cctgatgtat ttcgaagcgc tcgatcattg ccagcagaaa acaccatcac gacatccgac
       61 ttggccatga agtcgatgtt atcgaagtac gcgtcaacca gttctagcct gacagccaga
      121 tagtccacga tgacccaatt cggattgagt gcattgttca ccactcgctg cggctgggcc
      181 tgagacacaa aactgccatt catcaccgag gcgccagaca ccaccacggc tggcccccaa
      241 ttggtaatac cgtaatagcc cgccgtgttc aactccccgt tgaccacacc gaccaactca
      301 gcatcaaacg ctgagcccat catgccgaca ccatttcttg cagcacccgc cagccccatg
      361 acatgcgtcc catggaacgg tattggaacc cccggcacgg gaaactgatt gctaggaatc
      421 tccccccaaa ctcgaccagc aaactcggga tgtgatagtt ggatcgggct atccacaatc
      481 gccatgcgca cacccgtacc cgtaaatccc tgtgaccacg catactgagc gcgtatcgga
      541 tcaagacccc aattcgcgta gaactccggt gtctcgaaat cgctcggtga catctgtgca
      601 agcgtatcgg gtgcagttgc tgtcaaacca gaaacgatca gcaacaaagc cactccccgc
      661 ttaatagcta tttcagaata acctcgcgcg caacgcagca tatttcacct tttacccaca
      721 aacctcaacc aacaaaccta cggattaact accgaaatcc tgagaacata ttccaatcta
      781 ttgagtcact ccttgaatca gtaactgctt ggctcaacag tctcacaaac taactgactg
      841 ttctcatcat aaatagttgc aaccaaatca ttcgatagca aataacaaga taattgatcg
      901 cctcggattt tacccgttta gcgcgtaaag cccggttctt caggacgggg atgtaagcgc
      961 gggcgcagcc gatatgtcag tttttttggt ttttatgtca tcttggtcta tcgtagcctc
     1021 agtgtctttg atacactcgt tgccattatg gcagtgaacc gcaaagcctt taagttaagg
     1081 ttcaatccca caacagagtc aagatttaaa tatgttgaat gcggttaaac ggaaaacgcc
     1141 gactaggttg gcgctttaaa tgtatgagcc cgagggcatc gggtgatagc ctgtggagtt
     1201 gaaacagtgg ttttaatgat gaagcaggaa ccattgggaa gtagcgatac acgcccaatc
     1261 ttggcggctt tatgaagccg ctgggaatcc tcgtcgttca ggacggggag gacgtcaaga
     1321 gaacccttgt cttgctgtac gctttggcct tactttaata gccagagaaa ttctgccgcc
     1381 atcatgattc aagtcaagcg tataccttat tggtttataa atgccatggg gtgcctagca
     1441 ctgttgctag gctggcaaat ggctggtgcg gcaaccaaag agccgaccgc gcaaaccata
     1501 gaggtaggtg cttttgtaaa cgacatatcc aacctagatg taaccaaggg tacggtcaca
     1561 ctggatcttt acctttggat cgtgtcacca acaccgtttg atgcaaagac cggatttgaa
     1621 attatcaatg gcacaggcac agtcagactc gttgagacac ggcatcgcga tgatggcaag
     1681 tcctaccaat tgctgcgcat cgtggcagac agcaaacagc gttatgactt gcgtgactat
     1741 ccgtttgacc agcagacctt agcccttgaa tttgatttcg atccatctag cgaggcgacg
     1801 agtctcgatg tcacggctga tgtttctaac tcggcattgg cctctaacat caccctgcca
     1861 ggctggaggg tgagtgattt gaccgtcaat gccgatagac aaacctatcc cacttcatgg
     1921 ggatcggtta tccatgagca gagcgatttg agttatccac aattcacggt ctccgttcaa
     1981 gcggaacgtg aaacattggt atacctagta cgctacttct ctgtgatcat tttcgccggc
     2041 cttctggcca tgctcggctt gtttttaaaa cctagcgaga ccacaaggat ctcattgggc
     2101 attggtgcct acatttcttt gtcagctagc agtctggtca ttgcaaataa attacccgta
     2161 accgatgcgc tcaatttcag tgatcacatc atactggtga caggcgctgt cattctggct
     2221 accgttctct attcgttaac cacttaccac ctatacagca agacaccagc caaagcaggc
     2281 accatcgacc gaatagcacg catcatattc cccattgcgt ggctgtctgc gctggcgatt
     2341 atttttaatc tatagccatt gagcgatgcc ggaaatgatg accacgccca tcacttaacg
     2401 cactgcaata ccccgaaaac cactaaaacc accactgcaa ctgagcctgc agcatctggc
     2461 tgctcgtctg acctgacagc gtggtggcat acaccacatt cagacggctc gatggcccaa
     2521 gactggcacc aatgcccact tcaatgactg ccgagtcccg ggccatcgcc gctgacgaga
     2581 ccgtgaagtc tggccctgtg gcaaacga
//
LOCUS       DATBNL010000189         2743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161747, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000189 DATBNL010000000
VERSION     DATBNL010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161747"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VIC30_03140"
     CDS             complement(<1..190)
                     /locus_tag="VIC30_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803412.1"
                     /translation="MFYGRVVKINNIDGFFVQELKSLPMTVVSTIVAFKRVHQPKSLE
                     DLHQLDDLTRGLWERLWDE"
     gene            complement(200..736)
                     /locus_tag="VIC30_03145"
     CDS             complement(200..736)
                     /locus_tag="VIC30_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803413.1"
                     /translation="MASRSNKDQISPFSLNELCPCGSSMTHRWCCFAELAVKAAGQAY
                     DVRQRFESAIMTQVVNDSLEHTPFEQCEAAWQDFTFGSYRKLEHKDLTVDSHFREFLA
                     WFLFRRLARGINPALACVQRAQGDMPVYEMIINAVIEQPYSFWLAGDFEPGRCMPVKD
                     LLHDREFVLTEPLISALS"
     gene            complement(749..2140)
                     /locus_tag="VIC30_03150"
     CDS             complement(749..2140)
                     /locus_tag="VIC30_03150"
                     /inference="COORDINATES: protein motif:HMM:NF014825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEY7803414.1"
                     /translation="MANPNPNRKIQRNDPCPCGSGKKYKHCCLALANAPDPDSAKHKL
                     YETYALLFGRVSDYLHDDLPLEFTVLAWEQFHLGDPPEMDPESSEMIEFFLPWAMFYW
                     RPEVPYPDQTFGEEPANDKPANDELEEADADLKMLQLSPLAHMFLDAVDGRADQSGKY
                     RHHKVTPLERSLISELSQSPYSFFQVKEIVDNKYVTVTDLLVERHETVFMPEFAEELS
                     IGLIIYGQVITVDGITILPSVAPMIFFEDIAPALGQMQQKVTDLMPELGENWRLEMDD
                     EIRGLYYVLAEPMGGGEVTEGEIFDAEVMDGQSDTFADSMDSDMDLDLFEDPSKPVLT
                     TLTYELSGELQDHVSALAHLSGNTAEELLCSAEIEMTDDGSEHETVSFEWWDDELYDD
                     GAGAHLGEIMIAPHQVRANLIGQGPDERFKQEIEQHFGARAKLIDRKVVTVSDMMGEL
                     IKQRVSDRINRRK"
     gene            complement(2264..>2743)
                     /locus_tag="VIC30_03155"
     CDS             complement(2264..>2743)
                     /locus_tag="VIC30_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018433663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY7803415.1"
                     /translation="QMFQAVEIDGKAYWDGGFSGNPTISPLVRECSANDTILVQINPV
                     KRRRTPTTASAIASRVNEISFNAPLLKELQMIALLQQVADLGHCEGQLWARMRMHRIE
                     SDYLNELDYASKMNAEWAALTALRDEGIKAADTFLAEKGHHLGKRASLDLSALLEGM"
BASE COUNT          669 a          763 c          661 g          650 t
ORIGIN      
        1 actcatccca cagccgctcc cagagtcctc gggtcagatc atcaagttga tgtaggtctt
       61 ctagagactt tggctggtgc actcgtttga acgcaacgat ggtagacacc acagtcatgg
      121 gcagtgactt aagttcctgc acaaaaaatc catcgatgtt gttgattttg accactcgcc
      181 cgtaaaacac atcgccaggc tatgataggg cactaatcaa aggttctgtc aaaacaaact
      241 cacgatcatg cagcaggtcc ttgactggca tgcatcggcc aggttcgaag tcgcctgcca
      301 gccaaaatga atacggttgc tcaatcaccg cgttgatgat catctcgtag acgggcatgt
      361 cgccctgggc acgttgcacg caggccaagg caggattgat acctcgcgcc aaccgacgaa
      421 acaaaaacca cgccagaaac tcccgaaaat gactatccac ggtcaaatct ttgtgttcca
      481 gctttcggta tgaaccaaat gtgaaatcct gccaggccgc ttcgcactgc tcaaacgggg
      541 tgtgctcaag tgaatcgttg accacctggg tcataatggc cgactcaaac cgctgccgaa
      601 cgtcgtaggc ttggccagcg gctttgacag ctagctctgc aaaacaacac catcgatggg
      661 tcatcgaact gccgcacggg cataactcat ttagactgaa aggcgagatc tgatccttgt
      721 tgctacgtga tgccatcaat tcattccgct atttgcgccg gttgatacga tcggagacac
      781 gctgcttgat gagctcgccc atcatgtcac tgacagttac cactttgcgg tcgatgagtt
      841 tggcccgagc accaaaatgc tgctcgatct cttgcttgaa ccgctcatca ggtccttgcc
      901 caataaggtt tgcacgcact tgatgggggg caatcatgat ttcacccaag tgcgccccgg
      961 ccccgtcgtc gtacagctca tcatcccacc actcaaaact caccgtctcg tgttcgctgc
     1021 cgtcatctgt catctcgatt tcggcactgc acagcaactc ttcggcggta ttgcccgaca
     1081 ggtgcgcaag cgcgctcaca tggtcttgga gttcgccaga cagctcatag gtcagtgtgg
     1141 tcagcacggg cttagaggga tcctcgaaca agtctagatc catatctgag tccatggaat
     1201 ctgcgaacgt atcactttga ccatccatca cttctgcgtc aaatatttct ccttcagtta
     1261 cttccccacc acccatcggc tcggctaaca cgtaatacaa accacggatt tcatcgtcca
     1321 tctcaaggcg ccagttctca ccaagttcag gcatcaggtc ggtaaccttt tgttgcatct
     1381 gccccaacgc aggcgcgatg tcctcaaaaa agatcatcgg tgccaccgaa ggcagaatgg
     1441 tgatgccatc gaccgtgatc acttgcccat agataatcaa cccaatcgag agttcttcgg
     1501 caaactccgg catgaacacc gtttcgtggc gctcaacaag caagtcagtg accgtgacgt
     1561 atttgttgtc aacgatttcc ttgacctgaa aaaaactata gggtgactga ctcaactcgc
     1621 taatcagtga acgctcaagg ggtgtgactt tgtgatgcct gtatttgccg ctttgatcag
     1681 cccgaccgtc aaccgcgtct aaaaacatgt gggcgagcgg cgagagttgc aacatcttca
     1741 ggtcggcatc cgcctcttca agctcatcat tggctggttt atcattggct ggctcctcac
     1801 cgaaggtttg gtctggatac ggcacctccg ggcgccagta aaacatcgcc cacggcaaaa
     1861 agaactcaat catttctgat gactcgggat ccatctcggg tggatcccca aggtgaaact
     1921 gctcccaggc caaaacagta aactcaagtg gcagatcgtc atgaaggtag tcactgaccc
     1981 gaccaaacaa aagcgcgtaa gtttcgtaga gtttgtgttt cgccgagtca ggatcaggcg
     2041 cgttcgctaa cgccagacaa caatgtttgt acttcttacc gctgccacat gggcaagggt
     2101 cattgcgttg gattttgcgg ttggggttgg ggttggccat ggcttgtata tccgaagggt
     2161 ctggtcgagt acgtcaatac cggaaaaaat gtcattgtcg cagaaggaca caaaactaca
     2221 aattctctca cccacgaaca acgacggcgc gttgactctt tgactacatg ccttcaagca
     2281 acgcactcag gtccagcgat gcccgtttac cgagatgatg acctttttct gctaagaaag
     2341 tatcggcagc tttgataccc tcatcgcgca aggcggtaag cgccgcccat tccgcgttca
     2401 tctttgaggc gtagtcaagt tcgtttagat aatcagattc gatgcgatgc atgcgcatgc
     2461 gcgcccacaa ctgaccctca caatgcccaa gatcagcgac ttgctgtagc aaggcaatca
     2521 tttgcagctc tttgagcaga ggcgcattaa aagaaatctc attgactcga ctggcaatgg
     2581 cgctagccgt cgtgggggtg cgtctacgct tgacggggtt gatttgcacc aaaatcgtgt
     2641 cgttggcact gcactctctc actaaaggcg agatggtcgg gttcccagag aagccaccgt
     2701 cccaataggc cttgccatcg atttccacgg cttgaaacat ttg
//
LOCUS       DATBNL010000190         1887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_32168, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000190 DATBNL010000000
VERSION     DATBNL010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32168"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /locus_tag="VIC30_03160"
     CDS             complement(<1..1010)
                     /locus_tag="VIC30_03160"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7803416.1"
                     /translation="MHSTLSERLQALATNQADDLALIEPARTITFAKRERDVHALAAY
                     FSERGIKAGDRVALWLPNTIEWVSAFLALSRLGAITLSVNTRFRSRELEDLIDRAQAT
                     SLIYWPGFKGIDFDGILDDVSSEVRAKLLTRITMAELQQAVEQTWPEVGAHAAHAAHS
                     DHPTLTFSTSGTTSLPKFVLHSQSVIVRHADAVAQAFEYDHQTRVLASAPFCGAFGFA
                     TLIGGLLTGHAVVCEPVSTPDSLLTLVREHRVTHTYANNALILQMLEASNDQSDFASC
                     KLFGFAAFAPAQDELFDLAQRNGLALTGLYGSSELLALTAAQPTTPGNGDLSVRYEPG
                     GC"
     gene            complement(1021..>1887)
                     /locus_tag="VIC30_03165"
     CDS             complement(1021..>1887)
                     /locus_tag="VIC30_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY7803417.1"
                     /translation="LNPRRHPPVLSPTFRDDGKAFMNVAMSAIQNQAIDVLSDDQVTL
                     CMQYSTQWDGLCHVGAEFDTQGDGQLRKVYYNGYEAGTDVLGGENPPADHADCCGDGA
                     SFARKLSIDRYAQKGMQGRGVLVDLTRHLGFERSVVDAQTFINIISQDNIKIERGDML
                     VLRTGFAETILDMAGKPDHARLEQTGAVLDGSDAALLNWITESGIAAICADNYAVEAY
                     PARTSGPGHSILPLHHHCLFKLGVPLAELWYLRDLADWLHANGRHHFMLTAPPLRLPG
                     AVGSPVTPIATV"
BASE COUNT          438 a          517 c          535 g          397 t
ORIGIN      
        1 aagcagccac cgggttcata acgaacactg agatcaccat tgcccggcgt ggtgggttgc
       61 gccgcagtca gtgccagcaa ttcgctcgaa ccataaagac cagttaaggc taagccgttg
      121 cgttgtgcca gatcaaacag ctcatcttgc gctggtgcaa acgctgcaaa cccaaagagt
      181 ttgcagctag caaaatcgct ttggtcgttt gacgcttcta gcatctgcaa gatcaaggcg
      241 ttgttagcgt aagtgtgggt gactcgatgc tcacgcacca atgttaagag gctgtcaggc
      301 gttgagacgg gttcgcaaac gacggcatgg cctgttaaca ggccaccaat gagggtcgca
      361 aaaccaaatg ccccacaaaa gggtgcactg gccagcacac gagtttgatg gtcgtactca
      421 aaggcttggg cgacggcgtc agcgtggcgc acgatcacgc tttgtgagtg cagcacaaac
      481 ttgggcaatg atgtggtgcc tgacgtgcta aatgtcagag tagggtggtc gctatgagca
      541 gcatgagcag catgagcacc gacttcaggc caggtttgct ccacggcttg ttgcaactcg
      601 gccatcgtga tgcgcgtcaa aagcttggca cgaacctcgc ttgagacgtc atccaatatc
      661 ccatcaaaat caatgccctt aaaaccaggc caataaatca agcttgtggc ctgtgcccgg
      721 tcgatcaaat cctcgagctc gcgactacga aaccgggtgt tgactgacag cgtaatggca
      781 ccaagacggc tgagcgctaa aaacgcactt acccattcaa tggtgttggg caaccacagg
      841 gcgacgcgat cgccggcttt gatgcctcgc tccgagaagt aagcggcaag tgcatgtaca
      901 tcgcgctcgc gcttggcgaa ggtgatcgtg cgtgccggct caatcaatgc aaggtcatct
      961 gcctggtttg ttgctaacgc ctgtagccgt tcgcttaatg tgctgtgcat gacccgagcc
     1021 tcagacggtt gcaatggggg tcaccggtga tcccaccgca cctggcagac gcagcggcgg
     1081 tgctgtcaac atgaagtgat gacgaccatt ggcatgcaac cagtcggcaa ggtcacgcag
     1141 gtaccacaac tcggctaaag gcacgcctag cttgaacagg cagtggtggt gcagtggcaa
     1201 gatcgaatga ccggggccgc ttgttcgtgc gggataggcc tcaacggcat agttgtccgc
     1261 acagatagca gcaatgcccg attcggtgat ccagttcagt agcgctgcat cactgccatc
     1321 cagcaccgca ccggtctgtt caagccttgc atggtcaggc ttacctgcca tgtccaggat
     1381 ggtttcagca aagccggtac gcagcaccag catgtcaccg cgctcgatct taatgttgtc
     1441 ttggctgatg atgtttataa aggtttgagc atcaacgacg gagcgctcaa acccgaggtg
     1501 acgggtcagg tcaacgagta caccgcgccc ttgcatgcct ttttgtgcgt agcgatcaat
     1561 gctgagcttg cgcgcaaacg atgcaccatc gccacagcag tctgcgtggt cggctggcgg
     1621 gttctcgccg ccaagcacat cagtgccggc ctcatagccg ttgtaataga cctttcgcaa
     1681 ctgaccatcg ccttgcgtgt caaactcagc accaacatga cacaggccat cccactgggt
     1741 tgagtactgc atgcataacg tgacctgatc atctgacagc acgtcaatgg cctggttctg
     1801 gatggcggac atggcgacat tcataaaggc tttgccgtca tcccgaaagg ttggcgagag
     1861 caccggcgga tggcgtctgg gattcag
//
LOCUS       DATBNL010000191         3625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_62062, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000191 DATBNL010000000
VERSION     DATBNL010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3625
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62062"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1311
                     /locus_tag="VIC30_03170"
     CDS             <1..1311
                     /locus_tag="VIC30_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY7803418.1"
                     /translation="VVGQMQHDLFHVYTVDQHTLQVIRNLRRFTMPEHAQEYPLASRL
                     MAGLERHWLLYVAALFHDIAKGRGGDHSTLGAIDVRRFAREHGLSREDTELVVFLVDR
                     HLAMSQVAQKQDLSNPEVIQAFAKTVGDSRHLTALYLLTVADIRGTSPKVWNAWKGKL
                     LEDLFHLTQNALGGHAESANTVLQQRLEEAKRLTRLVGLRDDSRKAFWKQLDVAYFLR
                     HDAPDIAWHTRHLYYQISPEVPVVKARPVVGGTGLQIMVYTHDQNDLFARICDYFGQK
                     NLDVQDARIHTTKHNYALDSFVVLPAHAPSDLRSLADIVEHELGQALQRQDHDPQKAS
                     TQNKRLSRAFPFTPIVELQPDEGSQHWRLALVATDRPGLLAELAHTFKDFDVSLQMAK
                     VMTLGERVEDVFVISSPNLSQPRQQRQFQRAIYDMLTTEVANAA"
     gene            1301..1810
                     /locus_tag="VIC30_03175"
     CDS             1301..1810
                     /locus_tag="VIC30_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEY7803419.1"
                     /translation="MPLNLKSDRATLFGKNVLTAIAFVSFAAVGAALISQHLLDMLPC
                     AWCILQRMIFIVIGVVAMLGAIVPARAIRRLSMLGTLVLSVIGIAAAWHQWTVAAAEF
                     SCDQTLADRIVSGSGLDASMPWLFGIYATCMDAAVSILGLDFAVWSLLLYAVFALAAL
                     VALRATKAR"
     gene            complement(1864..3375)
                     /gene="purF"
                     /locus_tag="VIC30_03180"
     CDS             complement(1864..3375)
                     /gene="purF"
                     /locus_tag="VIC30_03180"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEY7803420.1"
                     /translation="MCGIVGVVGRGPVNQLIYDSLLLLQHRGQDAAGIATSDGNHFHM
                     YKGHGMVRDVFRTRSMRSLPGFSGIGQVRYPTAGSSHSADEAQPFYVNAPFGITFAHN
                     GNLTNWNELRESLFRIDQRHINTNSDSEVLLNVLAHELQRSANGVSLDEAAIFRAVAG
                     LHARVKGAYAVVAQIAGYGLLAFRDPHGIRPLCLGRSDSKRGTEWMVASESVALEGSG
                     FEFVRDLEPGEAVFVSLEGQVSQQVCSPPTSRAPCIFEFVYFARPDSVIEGVSVYNAR
                     LKMGEYLADKLARTLPLSDIDVVMPVPDSSRPAAMQLASRLNLEYREGLIKNRYVGRT
                     FIMPGQAVRKKSVRQKLNTIGMEFKGKNVLLVDDSIVRGTTSREIVEMARAAGAKKVY
                     MASAAPPVRFQNVYGIDMPTQSELIANGREDDEIAQMIGADALVYQDIADMQQAITDL
                     NPNLTSFDCSCFTGEYVTGDITPDYLTWLAQPRQEEDEGGGLQFNLGFAANDN"
BASE COUNT          869 a         1008 c          914 g          834 t
ORIGIN      
        1 gtcgtggggc agatgcagca cgacttattc cacgtctata cagtcgatca gcacacactg
       61 caagtaatac gaaatctgcg ccgcttcacc atgcctgagc acgcgcaaga ataccctttg
      121 gcatcgcggc tgatggcagg ccttgagcga cattggttgt tatatgtcgc agcgctgttt
      181 cacgatattg ccaaaggccg tggcggtgat cattccacac tgggtgccat tgatgtgcgc
      241 cggtttgctc gtgagcacgg tctgtctcgc gaggacacag aattggtggt gtttttagtt
      301 gaccggcatt tggccatgtc gcaagtcgca caaaagcaag atctctccaa tccagaggtc
      361 atacaggcat ttgccaagac cgtcggtgac tcgcgtcact taactgcact gtacttgcta
      421 acagtggccg acatacgagg cacgagcccc aaggtctgga acgcttggaa gggtaaactg
      481 ctagaggatt tatttcacct tacacaaaac gcgctaggcg gccatgccga atctgcaaat
      541 accgtcttgc agcagcgctt agaggaagcc aaacgtttga cgcggcttgt gggcttgcgc
      601 gatgacagcc gcaaagcttt ctggaaacaa ctcgatgtcg cctacttctt gcgccatgat
      661 gcgcccgata ttgcgtggca cactcgccat ctttattacc agatcagtcc cgaagtaccg
      721 gtggtcaagg cacgcccagt agttggtgga acaggcttac agatcatggt gtacacgcat
      781 gatcaaaacg atttgtttgc ccggatatgt gattatttcg gtcagaaaaa tctagacgtg
      841 caggatgcgc gcatccacac caccaaacac aattacgcat tggatagttt tgtggtgcta
      901 cctgcgcacg cgccaagcga cctgagatca ctggccgaca tcgtcgaaca cgagctcggt
      961 caagcgttgc aaagacagga tcatgaccca caaaaagcca gcactcaaaa caaacgtctg
     1021 tcgcgtgctt ttccatttac accgattgtt gagttgcaac ctgacgaagg cagtcaacac
     1081 tggcgcttgg cattggtcgc gactgaccgt cctggtttgc tagccgaact cgcccacacg
     1141 tttaaagact ttgatgtctc tttgcaaatg gccaaagtga tgacccttgg cgaacgcgtc
     1201 gaagacgtat ttgtgattag cagccctaac ttgtcccaac cgcgccaaca acggcaattc
     1261 cagcgtgcca tatacgacat gctaaccact gaggttgcca atgccgctta atctcaaatc
     1321 agaccgagca accctgttcg gtaaaaacgt gttaacggct attgcgtttg tctcgtttgc
     1381 ggccgtcggc gcggccttaa tcagtcagca tctgctggac atgcttccct gcgcatggtg
     1441 cattttgcaa cgcatgatct ttatcgtgat tggcgtggta gccatgctag gtgcgattgt
     1501 gccggcgcgt gcgatccgtc gactgtctat gctaggcacg cttgtcttgt ctgttattgg
     1561 catcgcagcg gcttggcacc agtggaccgt agcggccgct gaattcagct gcgaccaaac
     1621 actggctgac agaattgtgt ctggcagtgg tttagacgcc tccatgcctt ggttattcgg
     1681 catctatgcc acctgcatgg atgcggcggt cagcattttg gggcttgatt tcgccgtctg
     1741 gagcttgctg ctatacgcgg tctttgcgtt agcggcactc gtggctttaa gagctactaa
     1801 ggcgcgctag ccttacttgg gactaccctg caaagcaatt gtgctgatcg tccctagtca
     1861 ccgctaattg tcgttggctg cgaagccgag attaaactgc agccccccac cctcatcttc
     1921 ctcttggcgc ggttgagcta accaggtcag ataatccggt gtgatgtcac ccgtcacgta
     1981 ctcacccgtg aagcatgagc aatcaaatga cgtcagattc gggttcaggt ccgtgatggc
     2041 ctgttgcatg tcggcgatgt cttgatacac caaagcgtcg gcgccaatca tctgggcaat
     2101 ttcatcatcc tcacggccat tggcgatcag ctcgctctgt gtgggcatgt cgatcccgta
     2161 tacgttttga aaccgaaccg gtggtgccgc agaggccatg tagacctttt tggcgcccgc
     2221 cgcacgggcc atttccacaa tctcccgact cgtcgtgcca cgcacgatag agtcatcaac
     2281 caataagaca ttcttgccct tgaactccat gccaatggta ttgagctttt gccgtacgga
     2341 ttttttacgt actgcctgac ctggcatgat gaatgtgcgg ccaacataac ggttcttaat
     2401 caacccttcg cggtactcta ggttcagacg cgaggctaac tgcatggccg ccggacgaga
     2461 agagtctggc accggcatca cgacatcaat atcactaagc ggcaatgtgc gcgctagctt
     2521 gtcggcaaga tactcaccca tttttaggcg agcgttataa acggacacac cttcgatgac
     2581 cgagtctggg cgcgcaaagt aaacaaactc aaaaatacag ggtgcacgcg acgtgggcgg
     2641 gctgcagact tgttgactaa cttgtccttc aagcgacaca aataccgcct cgccaggttc
     2701 tagatcacgt acaaactcaa atcccgaacc ctcgagtgcc acggattctg atgccaccat
     2761 ccattccgtg ccgcgctttg agtcggagcg acccaaacac aagggtcgaa tgccatgagg
     2821 atcacgaaac gccaacaacc cgtaccccgc gatttgtgcg accacggcat aggcgccttt
     2881 aacacgagca tgtaagcccg caacggctct aaagatggcc gcctcatcta agctcacccc
     2941 attggctgag cgctgaagct cgtgcgccag aacgttcagt aaaacctcgg aatcagagtt
     3001 cgtgttgatg tgtcgttgat caatgcggaa caaggactcg cgcagttcat tccagttggt
     3061 taggttgcca ttatgtgcaa acgtgattcc gaaaggtgca ttgacataaa acggctgcgc
     3121 ctcgtcagca ctgtggcttg agccagccgt ggggtaacgc acttggccaa taccactaaa
     3181 acccggcaag gaccgcatac tgcgcgtacg gaacacgtca cgcaccatgc cgtggccctt
     3241 gtacatatga aaatgattac catcggatgt agcaatccca gcggcatctt gcccgcgatg
     3301 ctgcagcaat aacaagctgt cgtagatcag ctgattaacg gggccacggc ccacgacccc
     3361 tacgattccg cacatgatga ttttccggta aacaaatgat cttgttaaac aaacttaaaa
     3421 cagagaacgt gcaatctcaa ataaccagat acctaataag gcaaccactg atcaactggt
     3481 gatggcacac gcgccttaat ctgctgcacc acgccaacca cttgggtcga gaacatcgct
     3541 tgtcgccacc aagactcgct aggcagtggt gtgtaacccg ccaggataac gagcactaaa
     3601 acgagcaata ccccacgaat caatc
//
LOCUS       DATBNL010000192         2838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_111908, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000192 DATBNL010000000
VERSION     DATBNL010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111908"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..625
                     /locus_tag="VIC30_03185"
     CDS             239..625
                     /locus_tag="VIC30_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008351617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HEY7803421.1"
                     /translation="MPIYAYRCSNCGHEEDALQKMSDAPLSQCPACGQATYVKQVTAA
                     GFQLKGSGWYVTDFRDGGKKPAAKGGDKGGDKGGDNGSDKAAPATEANPGAGAATSTA
                     ATPAPATPAPATPAASTSTSTPTSTT"
     gene            683..1288
                     /locus_tag="VIC30_03190"
     CDS             683..1288
                     /locus_tag="VIC30_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEY7803422.1"
                     /translation="MRAFKRYLIAGLLIWVPLVITIWVITLLVTTLESVVPEALSAKA
                     LFGVDVPGFRVLIVLFVLILTGLFAANLLGRSIVERWERLIGRIPLVRSIYKSVKQVG
                     DTVLAPNGQAFRQAVLVQFPHKGTWTIALVTGKPGAEIAPLLSGEHISVYVPTTPNPT
                     SGYFLMVPANELIELDMTVDTALKYIVSMGVVAPPKTLEGA"
     gene            1293..>2838
                     /gene="aspS"
                     /locus_tag="VIC30_03195"
     CDS             1293..>2838
                     /gene="aspS"
                     /locus_tag="VIC30_03195"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEY7803423.1"
                     /translation="MRTCYTGEVCLDHLDQTVTLFGWVHRRRDHGGVIFIDLRDRAGL
                     AQIVFDPDNPTAFEIAERLRNEFCIRITGLVRHRPEGTVNGDLASGAIEILCREVEIL
                     NPSVTPPFQLDDENLSETTRLTHRVLDLRRSQMQQNLMLRYRVSMAVRRYLDDQGFID
                     IETPMLTKSTPEGARDYLVPSRVHGGEFFALPQSPQLFKQMLMVSGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDCETSFLGEEEIREIFEGMVRQVFQSVQGVALVDPFPMMSYEE
                     AMRRFGSDKPDLRVNLELTDLGDVMKDVDFKVFAQAASAAGSRVVALRVPGGADISRS
                     EIDAYTKYVGIYGAKGLAWIKVNEIAKGRDGLQSPIVKNIHDAAINEMLARTGAQDGD
                     ILFFGADRTKVVNDAMGALRLKIGHSEFGQAKGLFESGWKPLWVVDFPMFEYDEDSNR
                     YVALHHPFTSPKDGHEDYLETDPSQALSKAYDMVLNGSEIGGGSVRIHREEVQSKVFR
                     ALNIDET"
BASE COUNT          619 a          718 c          821 g          680 t
ORIGIN      
        1 tcaagcaacg gattaccttt aagcgggcag ctcattggta agccgtttgc ggaggcggaa
       61 ctactacgca tcggagtcag tgttcagtca gtgaccgatt ggcatcgact gcgccctgac
      121 ttaagcgcgt tggggctcta actgacaggt cgcttgcctg caaggttgtt gccttaaaaa
      181 gcgctaaaat cgagggcttt ccagaagata cgcacgactt ttaccaaagg agtgagaggt
      241 gcctatatac gcctatcgat gttcgaattg cgggcatgaa gaagatgcgc tacaaaaaat
      301 gtcggatgct cccctgtcgc aatgcccggc ctgtggacag gcgacctatg tcaagcaagt
      361 gaccgcagct gggtttcagc tcaaagggtc aggttggtat gtgaccgatt tccgcgatgg
      421 cggcaagaag cctgctgcta agggtggtga caaaggtggc gataaaggcg gtgacaacgg
      481 cagcgataag gcagcgcctg cgaccgaagc aaatccaggc gcaggtgctg ctacaagtac
      541 tgctgcaaca ccggcacctg caacaccggc acctgcaaca ccagcggctt caacctcgac
      601 atccacccct acttcaacca cgtagcgccc gttttgatca agggttgcct tgatcagcgc
      661 gagcgcgaca ccttggacaa ccatgcgggc atttaagcgc tacctgatcg ccggattgct
      721 gatttgggtc cctttggtca ttaccatctg ggtcatcacc ttgttggtca cgacactgga
      781 aagtgtggtg ccagaggcgc tgtcggctaa agctttgttc ggggtggatg taccgggctt
      841 tagggtgctg attgtcttgt ttgtgttgat cctaaccggg ttgtttgcag cgaacctgtt
      901 gggccgcagc attgttgagc ggtgggagcg actgattggt cgtatcccgc tggtgcgttc
      961 gatttataaa tcggtcaagc aagtgggtga cacggtcttg gcacccaatg gacaagcatt
     1021 ccgacaggcc gtcttggtgc agttcccgca caagggcact tggaccattg cgctggtaac
     1081 cggcaagccc ggggcagaga ttgccccgct tctgtccggc gagcacatca gcgtatatgt
     1141 tcccacgacg cccaacccga cctcgggtta ttttttaatg gtgccggcca acgagctcat
     1201 tgagttggat atgaccgttg atacagcact gaaatacatt gtttccatgg gggttgtcgc
     1261 acccccgaag acgcttgaag gagcatgact gaatgcgtac ttgctacacc ggcgaagttt
     1321 gcctagacca ccttgaccag acggtgacac tttttgggtg ggtgcatcgg cgccgtgacc
     1381 atggtggcgt catttttatc gatctgcgtg accgtgccgg tttggcgcaa atcgtgttcg
     1441 acccagacaa ccccacggcg ttcgagattg ccgagcgttt gcgcaacgag ttctgcattc
     1501 gcatcactgg tttggttcgc caccgcccag aaggcacggt caatggtgat ctggcctctg
     1561 gtgccattga gattctctgc cgtgaggtgg aaatcttgaa cccttccgtg actccaccgt
     1621 ttcagcttga tgatgagaac ctgtccgaga ccacacgctt gacgcatcgc gtgctcgatc
     1681 tgcgtcgcag ccaaatgcaa cagaatctga tgttgcgcta ccgtgtgtcg atggctgtac
     1741 gtcggtacct cgacgatcag ggttttatcg acattgaaac ccccatgctc actaaaagca
     1801 cccccgaagg cgcacgtgac tatttggtgc cctcgcgtgt gcacggtggt gagttttttg
     1861 ccctgccaca gtcgccacag ctctttaagc agatgttgat ggtctcgggt tttgatcggt
     1921 attaccagat caccaagtgc tttcgtgacg aagacttgcg cgccgatcgg cagcctgaat
     1981 ttacccagat cgattgcgag acctccttcc ttggtgaaga agaaattcgt gagatcttcg
     2041 aaggcatggt gcgccaagta tttcaatcgg tgcagggcgt tgctttggta gaccctttcc
     2101 cgatgatgag ctatgaggag gcgatgcgtc gctttggatc ggacaagccg gacttgcgag
     2161 tcaatcttga gctcaccgat ctcggtgacg tgatgaaaga cgtggacttc aaggtgtttg
     2221 cgcaagcggc atcagcagcg ggtagtcgtg tggtggcatt gcgtgtgcca ggtggtgccg
     2281 atatctctcg cagtgaaatt gatgcctaca ccaagtacgt tggcatctat ggtgccaaag
     2341 gtctggcctg gatcaaggtc aacgagatcg ccaaaggccg tgatggtttg cagtcaccaa
     2401 tcgttaaaaa cattcacgac gccgcgatta acgagatgct tgcgcgcacc ggtgcccaag
     2461 atggtgacat tttgttcttt ggggccgacc gcaccaaggt agtcaacgat gccatggggg
     2521 cgttaagact taagattggt cacagtgagt tcgggcaagc taaaggtttg tttgagtcgg
     2581 gttggaagcc gctgtgggtg gttgacttcc ccatgtttga atacgacgaa gattccaacc
     2641 gctatgtggc gttgcaccac ccgtttacca gccccaaaga tggtcatgag gattacctag
     2701 agaccgatcc gagtcaggca ttgtccaagg cctatgacat ggtgttaaac ggctcggaaa
     2761 tcggtggtgg ctcggttcgt attcatcgtg aagaagtaca aagcaaagtc ttcagggcgt
     2821 tgaatattga tgagacca
//
LOCUS       DATBNL010000193         2181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_2112, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000193 DATBNL010000000
VERSION     DATBNL010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2112"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2181
                     /locus_tag="VIC30_03200"
     CDS             <1..>2181
                     /locus_tag="VIC30_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HEY7803424.1"
                     /translation="GEIVAAGTPAAVMAVDGSFTGQALRDYEAQISGAQANAGRPLQT
                     VLREPVHLAKHIEILHAREHNLQNISVQIPHGKFTVITGVSGSGKSTLAFDILFNEGQ
                     RRYLESLNAYARAIVQPAGKPDVDAIYGIAPTVAIEQRTSRGGRKSTVATMTEIHHFL
                     RLLYMKLGTQHCPDCGVSVEPQTAEQIAARVVRDHAGKHIGILSTLVSARKGYYTDLA
                     KWASGKGYTHLRVDGVFTPTDNWPRLDRYKEHTIELPVADFVVDKAKEAQLREAIETA
                     LHHGQGSLSVIWPVDLLKTDMQASLSSQHFSTKRACPGCGMSFPEPDPRLFSYNSKHG
                     WCNSCYGTGVRLQGFDGEQTGEESTWNASYDGETPTCDGCHGTRLNPIARAVMWRDQS
                     IAELAALPIAEAHTFFTGLITRGREAEIARDILQEVRSRLDFLREVGLSYLTLDRAAP
                     TLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLNALTKLEGNGNTLVV
                     VEHDDDTIRRAQHIIDIGPGAGVRGGQVVGHGDLQAIMDNPASVTGRYLREPLKHPLQ
                     ARRDVGDSVQRIKVTGARLHNLRSVDANIPIGRLTVVTGVSGSGKSTFAREVLLDNLA
                     NAVGIGEPEKWFGCQSIEDWQYIDRVLEVDQTPIGKTPRSCPATYIGFWDDIRKQFAD
                     TQEARMRGWKTNRFSFNTGDGRCPVCEGQGMRTVEMSFLPDVKVP"
BASE COUNT          495 a          655 c          592 g          439 t
ORIGIN      
        1 ggcgagatcg tggccgcagg cacgccggct gccgtgatgg cggtagacgg ctcattcacc
       61 ggtcaggcgc tgcgcgacta cgaagcgcaa atatcgggcg cacaagccaa cgctgggcgt
      121 ccactgcaaa ccgtgttgcg cgaacccgtg catctggcca aacacattga aatcctgcac
      181 gcccgcgagc acaacctaca aaacatctcc gttcagattc cccacggcaa gttcaccgtc
      241 atcacggggg tttctggctc aggcaaatcg accttggcct ttgatatcct gtttaacgaa
      301 ggacaacggc gctatctcga atcgctgaac gcctatgcgc gtgccattgt gcagccagcc
      361 ggcaaacccg atgtcgatgc catctacggc atcgcaccca cggtggccat cgaacaacgc
      421 accagtcgcg gtggtcgcaa atcgacggtt gccaccatga ccgagattca ccacttcttg
      481 cgcctgctct acatgaagct cggcacgcag cattgccccg attgcggggt cagtgttgag
      541 ccgcaaacgg ccgaacaaat tgccgcacgc gtggtgcgcg accatgccgg caagcacatc
      601 ggtatcttgt ctaccttggt cagcgcacgc aaaggttatt acaccgatct ggccaagtgg
      661 gccagcggca agggctatac ccatttacgc gttgatggtg tgtttacacc caccgacaac
      721 tggccacgcc ttgaccgata caaagaacac accatcgaat tgccggtggc ggattttgtg
      781 gtggacaaag ccaaagaggc acagttacgc gaagccatcg aaaccgcgct acaccatggg
      841 caaggttcac taagtgttat ctggccagtc gatttgctta agaccgatat gcaagcatcg
      901 ttgtctagcc aacacttctc gaccaaacgc gcctgccctg gttgcggcat gagtttccct
      961 gagccggacc ctaggctgtt ctcctacaac tccaagcacg gctggtgcaa cagctgctat
     1021 ggcacgggtg tgcgattaca aggctttgat ggcgagcaga ctggcgagga gtcgacttgg
     1081 aacgcctcct atgatggcga gacgccgact tgcgatggct gtcatggcac acgtctaaac
     1141 cccatcgcgc gtgcggtgat gtggcgcgat caatccattg ccgagctggc cgcactaccc
     1201 attgccgagg cacatacctt ttttaccggc ttgatcaccc gcggtcgcga agccgagatc
     1261 gcacgggata tcttgcaaga agtgcgctcg cgactcgatt tcttgcgcga ggttggtctc
     1321 agttatctga cgcttgaccg cgccgccccc accctatcag gcggtgaagc acaacgcatc
     1381 cgactggccg cacaactagg ctcaaacctg caaggggttt gttacgtact tgatgagccc
     1441 accattggat tgcacccacg cgacaaccag atcttgctca atgccctgac caaactcgag
     1501 ggcaatggca acacattggt ggtggttgaa cacgacgatg acaccatcag gcgtgcacag
     1561 cacatcattg acatcggccc cggggctggc gtcagaggcg gccaggtagt gggtcacggt
     1621 gacctgcaag ccatcatgga caacccagct tcagttactg gccgctactt gcgtgaacca
     1681 ctcaaacacc cattgcaagc ccgtcgtgat gtgggtgact cggttcagcg catcaaggtc
     1741 accggtgccc gactgcacaa cctgcgctcg gttgacgcca acatacccat tggccgtcta
     1801 accgtggtca cgggtgtatc tggctctggc aagtcaacgt ttgcccgcga ggtgttgctg
     1861 gacaatctag ccaatgccgt tggcatcgga gaaccagaaa aatggtttgg ctgtcagtct
     1921 atagaggact ggcaatacat cgatcgtgtg ctcgaagtcg accagacccc aatcggtaaa
     1981 acaccccgtt catgcccggc aacctacatc ggtttctggg acgacattcg caaacaattt
     2041 gccgacacac aagaagctcg tatgcgtggc tggaaaacca atcgcttttc ctttaacacc
     2101 ggcgacggcc gttgtccggt ctgcgaaggg caaggcatgc gtacggtgga aatgagtttc
     2161 ttgcctgacg tcaaagtacc a
//
LOCUS       DATBNL010000194         3758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_22120, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000194 DATBNL010000000
VERSION     DATBNL010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3758
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22120"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VIC30_03205"
     CDS             <1..481
                     /locus_tag="VIC30_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011800032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7803425.1"
                     /translation="HDFLHKASSLISKNHAMVVVEDLKVRNMSKSAKGDLVNPGRHVK
                     AKSGLNRSILDQGWGMFVQMLQYKQTWLGGEVIKVNPQHTSQTCPDCQHVSKDNRTTQ
                     SRFKCVACGYTENADLVGAFNVLARGHRVLACGVETLVLTMKHEPLGSSDTRPILAA"
     gene            complement(490..762)
                     /locus_tag="VIC30_03210"
     CDS             complement(490..762)
                     /locus_tag="VIC30_03210"
                     /inference="COORDINATES: protein motif:HMM:TIGR03071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA N-terminal domain-containing protein"
                     /protein_id="HEY7803426.1"
                     /translation="MLDVYVSNQLVGVLDQPDPYTFVFINYLPDAPSALPVSLLMPTR
                     TESWVSRELHPVFQISLPEGALRELITKKFAKRFIDCLPVLNDEDS"
     gene            complement(755..1078)
                     /locus_tag="VIC30_03215"
     CDS             complement(755..1078)
                     /locus_tag="VIC30_03215"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7803427.1"
                     /translation="MKTNKCLNRLAKYQHLDPLVLDLVLARKNQKLTQQKLADMAGVS
                     PRTVVLIEAGGDCTLTTLRRLVTALGLEMQVYKPRLPTLEDMTRENERLFAEQRMNQT
                     GDSRA"
     gene            1481..1717
                     /locus_tag="VIC30_03220"
     CDS             1481..1717
                     /locus_tag="VIC30_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012345467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HEY7803428.1"
                     /translation="MEPTIAQKAPYPVEVEAGKTYCWCACGKSQKQPFCDGSHKGSEF
                     APLAFTAEKSETKYFCGCKMTANKPFCDGTHSKL"
     gene            1862..3379
                     /locus_tag="VIC30_03225"
     CDS             1862..3379
                     /locus_tag="VIC30_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008252511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEY7803429.1"
                     /translation="MDNAISVGGGGASQVEPQWLGLKLANRHGLVAGATGTGKTITMQ
                     VLAESFSNAGVPVFLTDIKGDVSGMALEGQDKGWQKKRAERIELESFQFQASPVIFWD
                     FFGEFGHPVRATVSEVGPFLLSRMLDLTEAQEGVINIAFKLSDEEGLPLLDLKDLRAM
                     LSFLGEHRAEISRLYGNVSTASIGAIQRKLLVLENQGATPFFAEPALEFADLMRTAPD
                     GRGYVSILHAERLMRTPQLYATFMLWFLSELFEELPEVGNPEKPVLVFFFDEAHLLFK
                     GAPASLLEKIEQVARLIRSKGVGVYFVTQNPDDVPDSVLSQLGNRVQHALRAFTARDQ
                     QALKKAAQTYRPNPRFDIAESIRDVGVGEAITSFLQGKGEPGVAERTLIRPPGSGVGP
                     LEATARTTIMARSPVAGKYDQMVDRDSAHEMLARRAEAAASQAQAKQEPKQEGSEATQ
                     TQDASAKPSRGGSGGSSRRGDSVIEAFFKSFARQLGTRSGRALIRGILGSLMKGR"
     gene            complement(3537..>3758)
                     /locus_tag="VIC30_03230"
     CDS             complement(3537..>3758)
                     /locus_tag="VIC30_03230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803430.1"
                     /translation="TGWSGVGELDAIDNVDGFEESDINTRPLNTVVVRISLLPRQFPS
                     AMSSPFALLVAIVDMIDIVDIINFVDVLF"
BASE COUNT          895 a          905 c         1031 g          927 t
ORIGIN      
        1 acatgatttc ttgcacaaag cctcatcact gatcagcaaa aaccacgcca tggttgttgt
       61 tgaggacttg aaggttagaa acatgtcgaa atccgccaaa ggcgatctgg tcaatccggg
      121 tagacacgtg aaagccaagt caggcttaaa ccgatcgatt ctggatcaag gctggggcat
      181 gtttgtacaa atgcttcaat acaagcaaac ttggctaggt ggcgaggtga ttaaggtaaa
      241 tcctcaacac acctcgcaga cctgcccaga ttgccagcat gtcagtaaag acaatcgcac
      301 cacacaatca agatttaaat gtgttgcatg cggttatacg gaaaacgctg acttggttgg
      361 cgcgttcaat gtattagccc gagggcatcg ggtgctcgcc tgtggagttg aaacgttggt
      421 tttaacgatg aagcatgaac cattgggaag tagcgataca cgcccaatct tggcggcttg
      481 ataaagccgc taggaatcct cgtcgttcag gacggggagg cagtcaataa atcgtttggc
      541 aaattttttt gtgatcagct cgcgaagcgc cccctcaggc aaagaaattt gaaacacagg
      601 gtgaagttct cgactgaccc agctttcagt tcgcgtaggc atcaaaagcg atacgggcaa
      661 tgcgcttgga gcgtccggca ggtagttaat aaaaacaaac gtgtacgggt cgggctgatc
      721 taagacgccg accagctggt tagacacata cacatcaagc acgggagtca cctgtttggt
      781 tcatacgttg ctcggcgaat agtcgctcgt tttcgcgggt catatcttcg agtgttggca
      841 ggcgcggttt gtagacctgc atttctagac cgagcgctgt cacgaggcgg cgcagcgtgg
      901 ttagcgtgca gtcgccaccg gcttcaatca gaacaacggt acggggggac acgcctgcca
      961 tgtcagcgag tttttgttgc gtcagtttct ggtttttccg agccaagaca agatcgagca
     1021 ccagcggatc aagatgctgg tatttggcta gcctgttgag gcatttattt gtcttcatat
     1081 gagtattata aattacattt gtgtacatta acaccgaaaa tgtaatctat gaattactat
     1141 tttgaagggt ttttctcttt atgggttttc tgtttctctc taaccgcttc tctttgactg
     1201 tttgccagcc agcaaaatca ccagtggtcg caattaatac gctagcttga aacgcttaac
     1261 gggcaacacc ggttgatact ggctgactcc agctaaggac gtgttcaaga acagccgggg
     1321 gtggcgtgtg ggcatccatg cctccaggtg gtgcctaagc gtactttctg gtgtgtacct
     1381 aaattgtcac gccaacggcg tgacaatctt tcttaacaag ctacttaacc agcgcacagc
     1441 cgcattgggc ggccgtgcgt cattcaatca aggaatcact atggaaccaa ccattgcaca
     1501 aaaggccccg tatcctgtcg aagtcgaagc tggcaaaact tactgctggt gcgcctgtgg
     1561 caaaagccag aagcagccgt tttgtgatgg ctcgcataag ggcagcgagt ttgcgcccct
     1621 ggcgttcacc gccgagaagt ccgagaccaa gtatttctgt ggctgcaaga tgactgccaa
     1681 taagccattc tgtgatggga cgcattcgaa gctgtaggca ttgtctttgc ctactctttc
     1741 tagggtaggt gacccgatag ttgcggtctt tttgacagcc gatattcctt aatttcgttt
     1801 aaagtcagat cagcattgcc agttaggcga gcgttgaatt tgaaaagagg aatatcggca
     1861 tatggacaac gcaatctcag ttggtggtgg tggagcgtct caagtcgagc cgcaatggct
     1921 cggtttgaag ttagccaatc gccacggtct ggtggctggg gccacaggta cgggtaaaac
     1981 catcaccatg caggtgcttg ccgagtcgtt ttctaatgcc ggtgtgccgg tgtttctgac
     2041 cgacatcaag ggtgatgtca gcggcatggc cttagagggt caagacaagg gctggcaaaa
     2101 gaagcgggcc gagcgtattg aactcgaatc ctttcagttc caggcttcgc cggtcatctt
     2161 ctgggatttc tttggtgagt tcggccaccc ggtgcgcgcc acggtctccg aagttggacc
     2221 atttctgctg tctcgcatgc tggatttgac tgaggcccaa gagggtgtca tcaatatcgc
     2281 attcaaactg tcagacgaag aaggcttgcc actgcttgat ttgaaagacc tgcgtgccat
     2341 gctcagtttt ttaggggagc accgcgctga gatttccagg ctatacggca atgtctcaac
     2401 agcgagcatt ggtgcgatcc agcgcaagct gctcgtgctc gagaatcaag gcgccacacc
     2461 gttttttgcg gaaccggcgc ttgaatttgc tgatttaatg cgcaccgcgc cagacggccg
     2521 gggttacgtg tctattttgc atgctgagcg attgatgcgc acgccccagc tctacgccac
     2581 gttcatgttg tggtttctgt ctgaattgtt cgaggaattg cccgaagtag gtaatcctga
     2641 gaagccggtg ctggtgtttt tctttgatga agcacacttg cttttcaaag gggcgcctgc
     2701 ctccttgctc gagaagatcg agcaagtcgc acgtctcata cgatccaaag gcgtgggcgt
     2761 ctactttgtc actcaaaacc ctgatgacgt gccagacagt gtgttgagtc aacttggcaa
     2821 cagagtgcaa catgccttgc gcgcttttac cgcccgggac caacaggcgt taaaaaaagc
     2881 tgcacagacc tatcgaccca acccacggtt tgacattgct gaatcgattc gcgacgttgg
     2941 cgtgggggag gcgatcacct cgtttctgca aggcaaggga gagcctgggg tagctgagcg
     3001 tacgttgatc cgtccgccag gttcaggggt agggcctctg gaggcgactg ccagaaccac
     3061 catcatggcg cgctcgcctg tggccggtaa atatgaccag atggtcgatc gcgacagtgc
     3121 gcatgagatg cttgcacgtc gcgccgaagc ggccgctagt caagcacaag ccaagcaaga
     3181 acccaagcaa gaagggtctg aagccacgca aacgcaagac gcatccgcca aaccgtccag
     3241 gggtggctca ggtggttcat cgcgtcgtgg cgactccgta atcgaggctt tttttaagtc
     3301 atttgcccga cagctcggta cgcgttcggg gcgtgccttg atccgtggca tcttgggtag
     3361 tctgatgaag gggcgttgac ccgcaggtct caatatgtat accgattaga tgcaacaaac
     3421 ttgcggatta gacgggcttt tagtgcggat tggacggata actgtttcga aatagacggc
     3481 ttttcatttc atattggacg gtgttatagt acggattaga cgacatgagt ttgaaattaa
     3541 aaaagcacgt cgacgaagtt gatgatgtcg acgatgtcaa tcatgtcgac aatggccacg
     3601 agtaaagcaa acgggctcga catggccgat gggaattgtc tgggtagcaa gcttattcga
     3661 acaacaaccg tattcagagg cctagtgttt atgtcagatt cttcgaatcc atcgacgtta
     3721 tcgattgcat cgagctcacc cacacccgac catcctgt
//
LOCUS       DATBNL010000195         1962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_42202, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000195 DATBNL010000000
VERSION     DATBNL010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42202"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VIC30_03235"
     CDS             <1..516
                     /locus_tag="VIC30_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide synthetase C
                     domain-containing protein"
                     /protein_id="HEY7803431.1"
                     /translation="PYTGFLYAGVMIGEGEDASRPIKVLEFNCRMGDPETQPILMRLQ
                     SDLLEPLDAAIDGKLDQVTLDWDPRTALGVVMASAGYPAEPRTGDGIVDHRTTDATDP
                     EVVVFHAGTKIERGELVTAGGRVLCVTALGDTVNDARHRAYARIEEIKFDGAQYRTDI
                     AWRALTPEADD"
     gene            518..1438
                     /gene="hemF"
                     /locus_tag="VIC30_03240"
     CDS             518..1438
                     /gene="hemF"
                     /locus_tag="VIC30_03240"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEY7803432.1"
                     /translation="MTDPQAPDVPAVQRYLTGLQDKIVAALESADGGEFRRDEWVREQ
                     GGGGISRLIEGGDLFERAGVLFSHVKGDTLPASATAHRPNVAGRSWEAMGVSMVLHPG
                     NPYVPTTHMNVRMFVAYARPGVQEADIFWFGGGMDLTPYYVFEDDARHFHLACKQALD
                     AHDPELYPAYKKWCDEYFYLKHRQETRGVGGVFFDDLSEPGFEASFGVMRSVGDAFLQ
                     AYLPIVEQRRSMPYSHREKDFQRYRRGRYVEFNLVFDRGTLFGLQSGGRTESILLSMP
                     PEVSWRYDWHPEPDSPEARLYDYLKPRDWV"
     gene            1438..>1962
                     /gene="nadD"
                     /locus_tag="VIC30_03245"
     CDS             1438..>1962
                     /gene="nadD"
                     /locus_tag="VIC30_03245"
                     /inference="COORDINATES: protein motif:HMM:TIGR00482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEY7803433.1"
                     /translation="MASGSGKRIGLLGGSFDPVHIAHIELAKAALKHLNLDEVQLLPA
                     KQPWQKPELATSAQDRLNMLELATDGLPGIVINPIELKRPGKTYTLDTLNELPREHAY
                     FWLMGADQLANFPTWSNWQEIAKRLTLVAAQRPGNALQVPPAVQTLIDAGRAHVQTLP
                     FEPLAISSSELRELL"
BASE COUNT          422 a          554 c          545 g          441 t
ORIGIN      
        1 ccctacaccg gctttttata tgccggggtc atgattggtg aaggcgaaga cgccagccgc
       61 cccatcaaag tgcttgaatt taactgtcgc atgggtgacc cggaaacaca gcccattctc
      121 atgcgcttgc aatccgatct cctagaaccg ttagatgcgg ccattgatgg caagcttgat
      181 caagtcaccc tcgactggga cccgcgcacg gccctaggtg tggtcatggc cagtgctggc
      241 tatccagccg agccccgcac tggtgatggc attgtcgacc atcgcacaac ggatgcgacc
      301 gaccccgaag tggtcgtgtt tcacgcgggc accaagatcg aacgtggcga actggtgaca
      361 gctggtggcc gtgttttatg cgtcaccgcc ttgggtgata cggtcaatga tgcgcgtcat
      421 cgcgcctatg cgcgaatcga agaaatcaaa ttcgatggcg cccagtatcg aaccgatatc
      481 gcctggcgtg cactcacgcc tgaagcagat gactgatatg actgatccac aagcacccga
      541 tgtaccggct gtacagcgtt acctgacagg gctacaagac aagattgtcg cggcactcga
      601 gagcgctgac ggcggagagt ttcgtcgtga tgaatgggtg cgtgaacaag gcggtggagg
      661 gatttctcgt ttgatcgaag gcggtgacct gttcgaacgt gccggtgtgc tgtttagcca
      721 tgtcaagggt gacacgttac ccgcatcggc cacggcccac cgccccaatg tggccggacg
      781 ctcctgggaa gcgatgggcg tttccatggt gcttcaccct ggcaatcctt atgttccgac
      841 cacccacatg aacgttcgca tgtttgtggc ctatgccagg cccggcgtgc aagaagccga
      901 catcttctgg tttggtggtg gcatggacct cactccctat tacgtttttg aagacgacgc
      961 acgtcacttt cacttggctt gcaaacaagc gctcgacgcc cacgaccccg agctctaccc
     1021 tgcatataaa aagtggtgtg acgagtattt ttacttaaag caccgtcaag aaacccgtgg
     1081 tgtgggtggt gtgttttttg atgatctgag cgaacccggc tttgaagcct catttggcgt
     1141 gatgcgcagt gtcggtgatg cgtttttaca ggcgtatctg cccatcgttg aacaacgtcg
     1201 ctcaatgcca tattcccacc gagaaaaaga ctttcagcgc tatcgtcgcg ggcgctacgt
     1261 tgaattcaat ctggtgttcg atcgtggcac gctatttggt ttacagtcag gcgggcgcac
     1321 cgagtcgatt ctgttgtcga tgccgcccga ggtcagctgg cgctacgact ggcacccaga
     1381 gcccgactcg ccagaggcgc gtttgtacga ctacctaaaa ccgagggact gggtctgatg
     1441 gcctccggta gtggcaaacg cattggctta ctcggtggta gttttgatcc ggtgcatatc
     1501 gcacacattg agctggctaa ggcggcactt aagcatctca atctcgatga agtgcagtta
     1561 ttgcctgcca agcagccctg gcaaaagccc gagctcgcca cgagcgcaca agaccgactc
     1621 aatatgctcg aactggcgac ggacggcctg cccggcatcg tgatcaaccc cattgagctc
     1681 aagcgtccag gtaaaaccta cacgctagat acgctcaatg aattgccacg tgagcatgcg
     1741 tacttttggc tcatgggtgc cgatcaactc gctaacttcc ctacttggtc aaactggcaa
     1801 gagatcgcca agcgtctaac gcttgtcgct gcccagcgcc ctggcaatgc actacaagtg
     1861 ccaccagcgg tgcaaacgct aatcgatgcc ggtcgagcac atgtgcaaac cttgccgttt
     1921 gagccgctcg cgatctcatc aagtgagctg cgtgaattgc tc
//
LOCUS       DATBNL010000196         1593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_171398, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000196 DATBNL010000000
VERSION     DATBNL010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171398"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VIC30_03250"
     CDS             <1..208
                     /locus_tag="VIC30_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015001845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEY7803434.1"
                     /translation="LDVRHWVCGECGAEHDRDVNAARNILARGLAQLVIESAVVEAKA
                     CEASVNKAQAEVGSDLPVEGILAR"
     gene            complement(481..1014)
                     /locus_tag="VIC30_03255"
     CDS             complement(481..1014)
                     /locus_tag="VIC30_03255"
                     /inference="COORDINATES: protein motif:HMM:NF016221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEY7803435.1"
                     /translation="MKASTSLASMIAVTLLSTAAFAQSSTTDLTFEDPWIRGSVPGQK
                     NGAGYLIIENQSSQPAALVSADSNRADRIELHTIVREGGVAKMREVQEVPVPANGSVT
                     LKPGGYHVMFIGLKQPFDAGEAVDVKLNFADGSSTDVTFTVKPPTYMGGGGMQGHGGN
                     SGGHGGHGGHGMKMQGQ"
     gene            complement(1117..>1593)
                     /locus_tag="VIC30_03260"
     CDS             complement(1117..>1593)
                     /locus_tag="VIC30_03260"
                     /inference="COORDINATES: protein motif:HMM:NF022610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 family protein"
                     /protein_id="HEY7803436.1"
                     /translation="GAITYNKCMSLNGSPISNKRCVRRAHRIHWMHWLVLWSLVLGQL
                     AMSTGLALAQTPSSHSTKVPVCTSTGVVYVAWSEAATKQTSEEHQTLPSTESTTHAGT
                     CVWCTVSPTQLRFDLHKTLLPHAHLTAQIDNRYKDSFTTPAFNGNPHAAPRAPPFV"
BASE COUNT          337 a          384 c          480 g          392 t
ORIGIN      
        1 tttggacgtg cgtcattggg tatgtggtga gtgcggtgca gaacatgatc gagacgtgaa
       61 tgcggctcga aacattcttg cccgtggtct tgctcagtta gtgattgaat ctgccgttgt
      121 ggaggcgaaa gcctgcgaag catcggtaaa taaggcgcaa gccgaggtcg ggtcagacct
      181 tcctgtagag ggaatccttg ctcgttaggg cgaggatgtg atcaaaaagg cgtcactcaa
      241 aagggggcgg gctgaagggg aatggttgat gtgtatcaaa aattggtact agagtgatcg
      301 gcactgtggt ttggttgccc catcgattgc gtcttaacag cacggtgacg agcctggatg
      361 tggcgaggat gtgacgaaga tgtggcaacg ccaaatgcag tgctcaagta gtattcaccg
      421 catttggcgt cacagatgca gcatcggtca aacaagcgac cgactgcctt tgttcagcgt
      481 ctactggcct tgcattttca tgccgtgacc gccgtgaccg ccatgcccgc cactgttgcc
      541 gccgtggcct tgcatgccac caccacccat gtaggtgggt ggcttgacgg tgaaggtgac
      601 atcggttgac gatccatccg caaaattcag tttcacgtcg acagcctcac cagcatcgaa
      661 cggttgtttc agaccgataa acatgacgtg atagccgcct ggctttaatg tcacagaacc
      721 atttgcaggt actggcacct cttggacttc acgcatcttg gccacgccac cttcacgcac
      781 gatggtatgc agttcaatgc ggtcagcgcg gttgctgtct gcggacacta gagcggccgg
      841 ctggctgctt tgattctcaa tgatcagata gccagcgcca tttttttgac cggggactga
      901 gccgcgaatc caagggtctt caaatgtcag gtcggtggta cttgattggg caaacgcagc
      961 ggtgctcagc agtgtgacgg cgatcatgct cgccagtgat gttgatgctt tcatggtatt
     1021 tggtcctttg tttgtttggt atcgcggcgc aaactgcagc tttcttcaaa cggttggtct
     1081 ggcgccggct ggaatcttta atgcaagaga tgactgtcaa acaaagggtg gtgctctagg
     1141 tgcggcatgt gggttgccgt taaatgcggg tgtagtgaac gagtctttgt agcggttgtc
     1201 aatctgtgcg gttaagtgag cgtggggcag cagcgttttg tgtagatcaa accgcagctg
     1261 agtcggtgag accgtgcacc aaacgcaggt gccggcgtgc gtggtgctct ctgtgctcgg
     1321 cagcgtctga tgctcctcgc tggtttgctt ggttgctgcc tcagaccaag caacataaac
     1381 aacgccggta ctggtgcaaa ccggcacttt ggttgaatgg ctcgaaggcg tttgcgccaa
     1441 ggccaatccg gtgctcatgg caagttgccc gagcaccaga gaccataaaa caagccagtg
     1501 catccaatgt atccgatgcg cccgacgcac acagcgcttg tttgaaatgg ggctaccgtt
     1561 tagtgacatg cacttattgt aggtgattgc gcc
//
LOCUS       DATBNL010000197         2327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_121969, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000197 DATBNL010000000
VERSION     DATBNL010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121969"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VIC30_03265"
     CDS             complement(<1..490)
                     /locus_tag="VIC30_03265"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY7803437.1"
                     /translation="MESEQLEVLDFLQRHLPFTALPEESLQELAKTIDVRYFKADSQI
                     LKFGEAAHNWFIVRSGAVEVFRRDGTLYNRLTEGGHFGEAGLLQQRRQVRFSVTALED
                     TLLYVLPGEAFLDVFENHEAFADLVEVDDHSRLRTVVSKSEQANELMSASVESLLVRE
                     AVT"
     gene            complement(523..2193)
                     /locus_tag="VIC30_03270"
     CDS             complement(523..2193)
                     /locus_tag="VIC30_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008250775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071705 - nitrogen compound transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEY7803438.1"
                     /translation="MSDKNNDYMKPDGEVNPIDTDYTIGQDNIVMNVGPFGLDIHNRV
                     FGVSALLIIIFVVLTMAFQEQAEPMFSALRGWLTSNLDWFFITAGNIFVVVCLGIAIS
                     PLGKVRIGGTEAKPDYSYAGWFSMLFAAGMGIGLMFYGVSEPLSHFSSSMAGVTMENG
                     VRTDWAPLGAAAGDETAATKLAMAATIYHWALHPWAIYAVLALGLAIFSFNKGLPLTI
                     RSVFYPLLGERIWGWPGHLIDILAVLATMFGLATSLGFGSSQAAAGLHFLFGFPLGDA
                     TQIMLVIGITAIAMISVLAGLEAGVKRLSEINMVLAAILVLFVIFVGPTLVIVSGFFD
                     NLLSYVEYLPALGNPIDREDANFSQGWTAFYWAWWISWSPFVGMFIARVSRGRSVREF
                     IVSVLIVPSLACILWMTVFGETAIFQVVNDGYKAVTDADLPLQIFYMLEALPLHGITS
                     FVAIVLVVVFFVTSSDSGSLVIDVIASGGKVESPAPQRVFWCTFEGLVAIALILGGGA
                     VALQAMAVSTGFPFAIVLLVATVSLIKGLMSEPRSGKPVGAAQIAKRA"
BASE COUNT          624 a          640 c          611 g          452 t
ORIGIN      
        1 ctgtcacggc ttcgcgcacc aagagacttt cgaccgaggc tgacatcagt tcgttggctt
       61 gctcgctttt agagacaact gtgcgcaggc gcgagtggtc atcgacttca accaagtcgg
      121 caaatgcctc gtggttctcg aatacatcga gaaaggcttc gccaggtaat acgtagagta
      181 gggtgtcttc gagcgcggtg acactgaatc gaacttggcg gcgctgctgc agcagcccgg
      241 cttcaccaaa atgaccgcct tcggtcaagc ggttgtagag cgtgccatca cgacggaaca
      301 cttcgacagc accgctgcgc acaataaacc agttgtgcgc agcctcgcca aatttcagga
      361 tctgcgagtc agccttgaaa tagcgaacat cgatggtttt agccagttcc tgcagagatt
      421 cttctggcaa tgccgtaaag ggcaggtgcc gctgcaggaa gtctaaaacc tcgagttgtt
      481 cgctttccat ggtcgactca ttttgtcatt gatctgaacg gatcatgcgc gcttggcaat
      541 ctgtgccgca ccgacgggct tgcccgaccg aggctcgctc atgagtccct tgatcaaaga
      601 caccgttgct accaataata cgatggcaaa cggaaagcct gtggaaacgg ccatggcttg
      661 tagtgccaca gcaccaccac caagaatcaa ggcgatggcc accaaacctt caaacgtgca
      721 ccaaaacacc cgttgcggtg ctggggactc aactttaccg ccagaggcaa tcacgtcaat
      781 caccagtgag cctgagtcag atgaggtgac gaagaacacc accaccagaa cgatggccac
      841 aaacgaggtg atgccgtgca gtggcaaggc ctcaagcatg taaaagatct gcagcggcaa
      901 gtcggcatcg gtcacggctt tgtaaccgtc attgaccact tggaagatgg cagtttcacc
      961 aaacaccgtc atccacagga tgcaggccag tgacggcaca atcagtaccg agacgatgaa
     1021 ttcacgcaca gaccgaccac gcgagacgcg cgcaataaac ataccgacaa agggtgacca
     1081 ggaaatccac caggcccaat agaaggccgt ccacccttgt gagaagttgg cgtcttctcg
     1141 atcgatcgga ttaccgaggg caggtaagta ctcaacgtag gacaacagat tgtcaaaaaa
     1201 gcccgacacg atcaccagtg ttggcccaac aaaaatcaca aacaacacca aaatcgcggc
     1261 cagtaccatg ttgatttctg atagccgctt aacaccggct tccaagccag ccagcacaga
     1321 aatcatggca atggcggtaa taccgatcac caacatgatc tgcgtcgcgt cacctagcgg
     1381 aaagccaaac agaaagtgaa gaccagcggc agcttgcgag gaaccaaagc ccagcgaggt
     1441 ggccagacca aacatggtgg ctagcacggc aaggatgtcg ataaggtggc caggccaacc
     1501 ccagatacgc tcaccgagca gggggtagaa gactgaacga atggtcagcg gcaagccttt
     1561 gttaaaagaa aagatcgcca gacccagtgc caagacggca taaattgccc aggggtgcag
     1621 tgcccagtgg tagatcgttg cggccatggc caacttggtg gcggcggttt catcaccagc
     1681 ggcggcaccc aagggcgccc agtcggtgcg cacgccgttt tccatcgtga caccagccat
     1741 ggagctactg aagtgtgaca gcggctcaga gacaccgtag aacatcaggc caatgcccat
     1801 gccagcggca aacaacatag aaaaccagcc ggcgtatgag tagtccggtt tggcttctgt
     1861 gccaccgatg cgtaccttac cgagtggcga gatggcaata cccaaacaaa ccaccacaaa
     1921 aatattgcca gcggtaataa aaaaccagtc taggtttgat gtcagccaac cgcgcaatgc
     1981 actgaacatt ggttcggcct gttcttggaa cgccatggtc agcaccacaa agatgatgat
     2041 caataacgct gagacgccaa acacacggtt gtgaatgtct aagccaaatg gccccacgtt
     2101 catgacaatg ttgtcttgtc cgatcgtgta gtcggtgtcg atcggattga cctcaccgtc
     2161 tggtttcata tagtcgttgt tcttgtcgct cacgcgattc ctcctaggtc gtgtgctgca
     2221 gtcacacggt ttcgttggat ggttagtaca aaaacgcact gtgcgcctat acatgccact
     2281 attgcaagcg gttaccttaa catggcggcg gttacaggct aaggttt
//
LOCUS       DATBNL010000198         2973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_62087, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000198 DATBNL010000000
VERSION     DATBNL010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2973
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62087"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..616)
                     /gene="yjgA"
                     /locus_tag="VIC30_03275"
     CDS             complement(32..616)
                     /gene="yjgA"
                     /locus_tag="VIC30_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HEY7803439.1"
                     /translation="MTTNDQTQPDPDERPSKSQVKRDMHALQELGKTVVELSTDRVKQ
                     LPLSEKLQDAVLLAQRTTSREGLRRQIHYVGKLMRDAPAEEIARQIDEWANGSRQQTA
                     HLHAIERDRDRLIADDTALTPWLEAHPDVDVQAFRAIIRAARSEHKKNQTLLPGQQPK
                     RKHYRALYQAIKDASEAPDDATLSENPASTEDPS"
     gene            754..2109
                     /gene="pmbA"
                     /locus_tag="VIC30_03280"
     CDS             754..2109
                     /gene="pmbA"
                     /locus_tag="VIC30_03280"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEY7803440.1"
                     /translation="MQPLPHREHRAHFEDLVTQALEYAKSLGATDAAAEVSEGQGMGV
                     NVRLGEVETVEQTRDRSLAVTVFAGQRRGSASTSDFSREALEQTVQAAWHIARYTAED
                     PAAGLPEPHELMLDASPDLSLYHPWSITVDQAAKMAIEAEDAARSTSKLITNSEGAGV
                     DSHEGQFVLGNTRGFLDGYTYTRHGLSVVPIAGRGENMQRDYWYTSDRRAERLSAPAE
                     VGRYAAHRALARLGARRLSTRQVPVLFEAPLALGLLGALTQAVSGGALYRKTTFLLDS
                     LGQSVFPDHVFVDENPFIPSAMGSGSFDDEGVRTVARQIVSAGILQSYFLSSYTARKL
                     GMQTTGHAGGSHNLRMYSSNTTPADDLEAMLREMGTGLLVTELIGQGVNYVTGDYSRG
                     AFGFWVENGQIQYPVQEITIAGNLKDMFRQIVKVGADELNRGSKTTGSILIERMSIAG
                     T"
     gene            2327..2755
                     /gene="rplM"
                     /locus_tag="VIC30_03285"
     CDS             2327..2755
                     /gene="rplM"
                     /locus_tag="VIC30_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEY7803441.1"
                     /translation="MKTFVAKPLEVKRDWFVIDAKGKVLGRVASEVARRLRGKHKPEF
                     TPHVDTGDYIVIINAADIVVTGNKALDKKYYRHSTYPGGISETNFTKMQERHPGRAIQ
                     KAVKGMLPSGPLGYAMIKKLKVYAGSEHPHAAQQPQPLDF"
     gene            2765..>2973
                     /gene="rpsI"
                     /locus_tag="VIC30_03290"
     CDS             2765..>2973
                     /gene="rpsI"
                     /locus_tag="VIC30_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019447061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY7803442.1"
                     /translation="MIGNWNYGTGRRKTSVARVFLKKGSGKIMVNGKPVDEYFARETG
                     RMVVRQPLELTGHLESFDFHINVHGG"
BASE COUNT          618 a          792 c          854 g          709 t
ORIGIN      
        1 tcgaggcact gtaaaactaa cgatgagttg ctcatgaggg gtcctctgta ctggctgggt
       61 tctcagaaag ggtggcgtcg tctggcgctt cagaggcgtc tttgatggct tgataaagcg
      121 cccggtagtg cttgcgtttg ggctgttggc ctggcaacag cgtctggttt ttcttgtgct
      181 cgctgcgagc ggctctgata atcgctcgaa acgcctgcac gtccacatcg gggtgggcct
      241 cgagccatgg cgtcaacgcc gtatcgtcgg caatcaagcg atcacgatct cgctcaatcg
      301 cgtgcaagtg agcggtttgt tgacgcgagc cattggccca ttcgtcaatt tgtcgggcaa
      361 tctcttcggc tggcgcatcg cgcatgagct tgccaacata atgaatttgt cgcctgagtc
      421 cttcgcgact ggtggtgcgt tgtgcaagta gaacggcgtc ttgcagcttc tcgcttagcg
      481 gcaactgctt gacgcggtcg gtgcttagct cgacaacagt cttgcctagc tcttgcaaag
      541 catgcatgtc gcgcttgact tgtgacttgc ttggtcgctc gtctggatcg ggttgggttt
      601 ggtcgtttgt ggtcatcagt gcaaagccgt tctatggttc gctatcatac gggattgagc
      661 cagtcgtatt tcacgcacgt atttcttttt cgtatcctac gttgccagtt acatttacgc
      721 actttccatt gacatccaca aggttgagcc cacatgcagc cattgccgca ccgagaacac
      781 cgcgcccatt ttgaagatct ggttacccag gcgctggaat atgccaagtc acttggcgcc
      841 acggacgctg cggccgaggt gtctgaaggg cagggcatgg gcgtgaacgt tcggctaggc
      901 gaagtcgaaa cggttgagca aacgcgcgat cgctctttag cggtcacagt ctttgcgggt
      961 cagcgccgtg gctcggcctc gacctctgat ttctcgcgcg aagcgcttga gcaaacggtt
     1021 caagccgctt ggcatatcgc acgctacacc gccgaagacc cggcggccgg actgcccgag
     1081 ccccatgagc tcatgcttga tgccagcccc gatttgtcgc tgtaccaccc ttggtccatc
     1141 acggttgacc aagccgccaa aatggcaatc gaggccgaag atgcagccag gagcaccagt
     1201 aagctcatta caaactcaga gggtgctggt gttgacagcc atgagggcca gtttgtgttg
     1261 ggtaacacgc gtggtttcct tgatggctac acctacacac gccacggtct gtcggtcgtg
     1321 ccgattgccg ggcgcggtga gaacatgcag cgtgactatt ggtacaccag cgaccgccgc
     1381 gccgagcgct tatcagcacc ggccgaggtc ggtcgatatg ccgcccatcg ggcattggca
     1441 cgtctaggcg cacgacgttt gtctacccgg caagtgccgg tgctgtttga agcaccactg
     1501 gcgcttggtt tgctgggcgc attgacccag gcggttagcg gcggggcgct ctaccgcaaa
     1561 accacattct tactggattc gctgggtcag tcagttttcc cggatcatgt gtttgttgat
     1621 gagaatccat ttatcccgtc tgccatgggc tcaggctcat tcgatgatga aggggtgcgt
     1681 acggtcgcgc gtcaaattgt ctcggctggt attttgcaaa gctacttctt gtcgtcttat
     1741 accgctcgca agcttggtat gcagacaact ggtcacgccg gtggctcgca caacctgcgt
     1801 atgtattcga gcaacaccac gccagctgat gatctagagg cgatgttgcg tgaaatgggt
     1861 actgggctgc ttgtgaccga gctcattggt cagggcgtga actatgtcac gggtgattat
     1921 tcacgtggcg cattcggttt ttgggtggaa aatggccaga ttcagtatcc agtgcaggaa
     1981 atcaccattg ctggcaactt gaaagacatg ttccgccaaa tcgtcaaggt cggtgccgat
     2041 gagttgaatc gcggcagtaa aaccaccggc tcgatcctga ttgagcgcat gtccatcgct
     2101 ggtacctaag gcacggtgag cccactgcga ccccccaccg ccggttaacc atggcagggc
     2161 tgtactgact gccatggtga ctaagttcat gctagaatct tcgattgccc gtaattcgct
     2221 gtaccggtac ggatgggaca cacgtcttgg cctgttcatg tgatgcgcga ggtaaaagca
     2281 agatatcgaa gatggtcttc gaatcgcaac tcattaggat ccaatcatga aaaccttcgt
     2341 ggctaagccg cttgaagtga agcgtgactg gttcgtgatt gacgccaagg gcaaagtcct
     2401 gggtcgtgtg gccagcgaag tcgcacgccg tttgcgcgga aaacacaagc cagagttcac
     2461 gccgcacgtt gatacgggtg actacattgt catcatcaac gctgctgata tcgttgtgac
     2521 aggtaacaag gcgttagaca agaaatacta tcgccactca acctatcccg gtggtatctc
     2581 cgagacgaac ttcaccaaaa tgcaagagcg tcaccccgga cgtgcaatcc agaaagcggt
     2641 caaaggcatg ttgcctagcg gccctttggg ttacgcgatg atcaagaagc tcaaggtcta
     2701 tgcaggtagc gagcacccac atgctgctca gcaaccgcag cctctcgatt tctaaggacg
     2761 cgtcatgatt ggtaattgga actatggcac gggccgccgc aaaacgtcgg tggcacgcgt
     2821 gtttctcaaa aaaggtagtg gcaagatcat ggtcaacggc aagcctgttg acgagtactt
     2881 tgcccgcgaa accggtcgta tggttgttcg tcagccgctc gaactgacag gtcacctcga
     2941 atcgtttgat tttcatatca acgtgcacgg tgg
//
LOCUS       DATBNL010000199         5057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_32247, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000199 DATBNL010000000
VERSION     DATBNL010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5057
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32247"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VIC30_03295"
     CDS             complement(<1..575)
                     /locus_tag="VIC30_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY7803443.1"
                     /translation="MSFWTTSTRLLMLVVLTVTLPWQAVAQTTVATGSNMDASATAIA
                     TVPTVDVSEVSSISKPVIAARAWILIDAVTGQTIAAQNPQQTVEPASLTKIMTVYLTF
                     DALKENRITRDQQVVVSEKAWKTPGSRMFIEPRKEVTVDEIIQGIVVQSGNDASVAIA
                     ETLAGTEEAFAQRMTEKALELGMTDTTFKNS"
     gene            complement(662..1321)
                     /locus_tag="VIC30_03300"
     CDS             complement(662..1321)
                     /locus_tag="VIC30_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006216438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7803444.1"
                     /translation="MSSNRTETVTFEGESGAIDCAMDWPDQTPTGWALVLHPNPAQGG
                     TRDNKVVTTIARACVQHGLVAVRPNFRGIGQSAGTFDEGRGETEDMVRLVEQFETQYP
                     ELAAGAWVLGGFSFGTCVGAQLYARLQAREQTQAQRLPQMVIWAGSAVLRFQHGDVAA
                     PSDALEIHGENDDVVPLEEVMRWARPIDMPVVVVPNTGHFFHGKLLILRELVQMRLKC
                     L"
     gene            complement(1349..1975)
                     /locus_tag="VIC30_03305"
     CDS             complement(1349..1975)
                     /locus_tag="VIC30_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803445.1"
                     /translation="MSRFWQMGLAMLAGLAIAGCSLGTVAPTPTVLDLGATEPAAAAT
                     TATTAWRFEGLVLPPFNEWRTRDRDAVIWRTGAEGTPNRYATFRWRDAPATLVRERLA
                     QRLSLHGPVLMESINAELPQLQVTLMQFEQVFAADGSSNQGVVTMQAVLVQNGQVVDQ
                     FLATESAPGQANDAPAGAQALRLATDRLIARLVQWLSGSLNRSLSTPN"
     gene            complement(2005..2949)
                     /locus_tag="VIC30_03310"
     CDS             complement(2005..2949)
                     /locus_tag="VIC30_03310"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY7803446.1"
                     /translation="MENRSHALLAGLFVLLLLIAAAATAIWLSQKDVTYQPYELVSKY
                     PVAGLSIQSQVRYQGMAVGQVQGLSIDRNKPGVIRVQIGVLPDTPITKGTWAEIATQG
                     VTGISNIDLRDDGAQPQMVSSSAANLYEIPVRPGFFQKLQSAGVGMLEDGEDVLDDLR
                     RFVSKENAQRFTVLLERAETLTANLNQSVVRLTPAMDALPQVMQQLDVTLKQFDQFGK
                     DFTKLADSAQQTIDYINSPTGPLSLATQSLDQLQRSAAQLQSSTLPQINRMIQGISQA
                     SDTFSQAAQSLEQSPQSLIFGPAPTKPGPGEPGFNGFQ"
     gene            complement(2957..3745)
                     /locus_tag="VIC30_03315"
     CDS             complement(2957..3745)
                     /locus_tag="VIC30_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803447.1"
                     /translation="MSESATHTKPVIEVTDLSTAFGTHVVHEHLNLNVMPREIIALVG
                     GSGSGKTTLLNHILGLQRAKSGSIDVFGRPIESYQGRDRVALTRRWGMLFQSGALFSA
                     LPVYDNVALPLREARYLPEDLIREVVLMRLAWVGLSAQDALLMPSDLSGGMIKRAALA
                     RALSLDPELLFLDEPTAGLDPQRSDEFVALIKALHEQLGFTVIMVTHDLDTIRDLATR
                     VAVLADKQVLVEGTITDVMQTKHPFIEAFFHGERGNRALGAAAS"
     gene            complement(3742..4869)
                     /locus_tag="VIC30_03320"
     CDS             complement(3742..4869)
                     /locus_tag="VIC30_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7803448.1"
                     /translation="MLEPDAELAKLAPLTHEHGVWRVNGLWNVQALAAPGMVRQRRKA
                     LKSVPHDAAWALDDALRLDSVGAQLLWDCWGSRLPANIAMSPAQQRLFDMLAQANAPD
                     KLPEPKSDWLAWLRHIGDGLALGAHHARLLLLLLGGLALDFVAMLADPKRAPFKEISA
                     QIYRTGAQALGITALVGFLIGVVISYLSAQQLALFGAGQFIVKLLGVSIVRELGPVLA
                     AILVAGRSGSAITAQIGVMRVTQELDAMQVMGISHGQRLILPRVIALAIVMPLLVLWT
                     GVMALIGGMLAAHYELGLQMTWFVQQLPNAVGVTNYWIGMIKGVTFGAWIALAACHFG
                     LKIEPNTESLGKGTTASVVTAITGVILIDAIYAVIFSEVGL"
BASE COUNT         1224 a         1506 c         1253 g         1074 t
ORIGIN      
        1 ttggagttct taaaggttgt atcagtcata cccaattcga gagctttttc agtcatgcgc
       61 tgagcaaacg cctcttcggt gccagccaac gtttccgcaa tggccacaga tgcgtcgttg
      121 cccgattgca ccacaattcc ctgaatgatt tcatcgaccg tgacctcttt gcgcggctcg
      181 ataaacatac gtgagcccgg tgttttccag gctttctcgg agacaaccac ttgctgatca
      241 cgtgtgatgc ggttttcttt taaggcatca aaggtcaaat acaccgtcat gattttggtc
      301 agtgaggctg gttcgaccgt ttgttgcggg ttttgtgcgg cgatcgtttg ccccgtgacc
      361 gcgtcaatca aaatccacgc tcgcgctgct atgactggtt tggaaatcga tgacacctca
      421 gaaacatcaa ctgtaggcac cgtggcaatg gctgttgcgc tggcatccat gttggaaccc
      481 gtcgccactg ttgtttgcgc caccgcctgc catggcaacg tgaccgttaa aacaaccaac
      541 attaacaacc gggtgctcgt cgtccaaaaa ctcatgaata tctcacttgt gaatcacaat
      601 tagttggcgt cctccccgtc ctgaagaacc gggctttacg ctaaacgggt aaagcgacat
      661 cttacaagca cttcaaacgc atctgcacaa gttctcgcaa aatcagtaac ttgccatgga
      721 aaaaatgacc ggtatttggt actaccacca caggcatgtc gatcggtcgg gcccagcgca
      781 tgacctcttc caaaggcacg acatcgtcat tctcaccgtg tatctccaaa gcatccgagg
      841 gtgcagcaac atcgccatgc tgaaaccgca gtaccgcaga gcccgcccag atcaccatct
      901 gtggcaggcg ctgcgcttgg gtttgctctc gtgcttgcaa acgcgcatac aactgtgcac
      961 cgacgcaggt gccaaacgag aatccgccta aaacccaagc gcctgcagca agctctggat
     1021 actgcgtctc gaactgttca actagccgca ccatgtcctc ggtttcaccg cgcccttcgt
     1081 caaaggtgcc tgccgattgg ccaatgcccc gaaaattcgg gcgcacagca actaacccgt
     1141 gttgcacaca cgcacgagca atggtggtga ccactttgtt gtcacgcgtg ccgccttgcg
     1201 caggattagg gtgtagcacc agcgcccaac ccgtcggcgt ctggtctggc caatccatgg
     1261 cgcaatcgat ggcgccggat tcaccctcaa aggtcactgt ttctgttcgg ttgcttgaca
     1321 tgatgttaag gagacttacg ttgatgactt aattaggcgt gctcagagaa cggttcaatg
     1381 aaccagagag ccactgtacc aaacgcgcga tcaaccgatc ggtcgccagg cgtagtgcct
     1441 gggcaccagc cggtgcgtca ttggcttgcc cgggagctga ctcggtggcc agaaattgat
     1501 caacgacctg accgttttgc accaacacag cctgcattgt caccacaccc tgattactgc
     1561 tgccatcggc agcaaagact tgctcaaact gcatgagcgt gacttgcaac tgtggcaact
     1621 cggcattgat gctctccatc aagacgggac catgcagtga gaggcgttgg gccagccgct
     1681 cgcgcaccaa ggttgctggc gcatcacgcc aacgaaatgt cgcatagcgg ttaggtgtgc
     1741 cctcggcgcc cgtgcgccaa ataaccgcat cacggtcgcg cgtacgccac tcgttaaatg
     1801 gcggtaaaac aagcccttca aaacgccagg cggttgttgc agtggttgca gccgcagcgg
     1861 gttcagtcgc accgaggtcg agcaccgtcg gtgttggtgc caccgtacca agactgcagc
     1921 ccgctattgc aaggccagcc agcatcgcta aacccatctg ccagaatctg ctcatgctca
     1981 tcttcatgtt ttattcatca cgctctattg aaacccgtta aaccccggtt cgcccggacc
     2041 tggcttggtg ggtgccggac caaaaatcag agactgcggt gattgctcaa gtgattgggc
     2101 tgcttgcgag aatgtgtccg aggcctgcga aataccctga atcatgcgat tgatttgcgg
     2161 cagggttgat gactgcagct gtgcggccga gcgctgcaat tgatcaaggc tttgcgtggc
     2221 tagagacagc ggcccagtcg ggctattgat gtaatcaatg gtctgctgtg ctgaatcggc
     2281 cagtttggtg aagtccttgc cgaactgatc aaactgcttc aaagtcacat caagctgttg
     2341 catcacctgc ggtaaagcgt ccatggccgg tgtgagtcgt accaccgact gattcaaatt
     2401 cgcagtaagt gtctcggcac gctctaacaa gaccgtaaag cgctgtgcgt tttctttaga
     2461 gacgaaacga cgcagatcat ccagcacatc ttcgccgtct tcaagcatgc caacaccagc
     2521 actttgcagc ttctgaaaaa acccgggtcg cacaggaatc tcatacagat tagccgctga
     2581 gctgctgacc atctgtggtt gcgcaccatc atcacgtaga tcaatgttgg agatgcccgt
     2641 caccccttgg gtggcaatct cagcccaagt gcccttggta atcggtgtgt cgggcaacac
     2701 accaatctga acacggatca cacctggctt gttccgatca attgacagac cttgtacttg
     2761 acccacagcc atgccctggt agcgcacttg tgactgtatg gacaaccccg ccaccggata
     2821 cttagatacc aactcatagg gctggtaagt cacgtctttt tggcttaacc agatggcggt
     2881 ggccgccgca gcgatcagca acagcagaac aaacaacccg gcaagcagcg cgtgactgcg
     2941 gttttccatt gacgtctcag gaggctgccg cgcctaaggc acgatttccc cgctccccat
     3001 gaaaaaaagc ttcgataaaa ggatgcttgg tttgcatcac atctgtaatg gtaccttcga
     3061 ctagcacttg tttgtcagcc aagaccgcaa cacgcgtggc taagtcgcga atcgtgtcta
     3121 gatcatgggt aaccatgatc accgtaaagc cgagctgctc atgcaacgct ttaatgaggg
     3181 ctacaaactc atctgaacgc tgcgggtcaa gccctgctgt gggttcatcg agaaacagca
     3241 gctcgggatc tagagacaag gcacgtgcca acgccgcgcg cttgatcatg ccaccggaca
     3301 ggtcagaggg cattagcaga gcatcttgcg cacttagccc tacccaagcc aggcgcatga
     3361 gcaccacctc acgaatcaga tcttctggca agtaacgcgc ttcgcgtaac ggcagtgcaa
     3421 cattgtcata aaccggcaac gccgagaata aggctccgga ctgaaacagc atgccccagc
     3481 gtcgggtcag cgcaacccta tcacgccctt gataagactc aatcggacgc ccaaagacat
     3541 cgatcgaacc cgatttagcc ctctgcaaac ccaggatgtg gttaagtaat gtcgtcttac
     3601 ccgaacccga accacccacc agcgcaatga tttcccgtgg catgacattt aggttcagat
     3661 gttcgtggac aacatgagtg ccaaatgccg tgctcaggtc agtgacttcg atcacaggtt
     3721 ttgtgtgggt agcggattcg ctcatagccc cacctcactg aaaatcaccg cataaatagc
     3781 gtcaatcaaa atcacgcccg taatggcggt caccaccgac gcagtcgtac ccttgccaag
     3841 actttcggta ttcggttcga tctttaaccc gaagtgacag gcagccaatg caatccaggc
     3901 accaaacgtc acgcctttga tcatgccgat ccagtagttc gtcaccccaa ccgcattagg
     3961 caattgctga acgaaccaag tcatttgtaa cccgagctcg taatgagccg ccagcatccc
     4021 gccaatcaag gccatgacac ccgtccaaag taccaacaac ggcatcacaa tggccagcgc
     4081 aatgacacgc ggcaaaatca ggcgctgccc atgtgagata cccatgacct gcatggcatc
     4141 gagctcttgg gtgacacgca tgacaccgat ttgggcagta atcgctgagc ccgaacgccc
     4201 tgccaccaaa atagctgcca gcaccggacc aagctcgcgc acgatcgaca cccccaagag
     4261 tttgacaata aactggcctg caccaaatag ggctagttgc tgggctgaca aatacgaaat
     4321 cactacccca atcaaaaaac ccaccaacgc ggtaataccc aacgcttgag cccccgttcg
     4381 atatatctgc gctgaaatct ctttgaacgg cgcacgcttt gggtcagcca acatcgccac
     4441 gaaatccagc gccaagccac cgagcagcaa caacagcaac cgcgcatggt gcgcacccag
     4501 agctagccca tcgccgatat gccgcaacca ggccagccaa tcacttttgg gctcgggtag
     4561 cttatcgggt gcattggctt gcgccaacat atcaaacaat cgctgctgtg ctggcgacat
     4621 cgcaatgttg gccggcaaac ggctacccca gcagtcccac agcagttggg cacccacaga
     4681 atcgagtcgc aaggcatcat caagtgccca tgcggcatcg tgcggcacgg atttcagggc
     4741 tttacggcgc tgcctgacca tccccggtgc tgccaacgcc tggacattcc agagaccgtt
     4801 aacacgccag acaccgtgct cgtgcgtcag cggcgcgagt ttagctaatt cggcatcagg
     4861 ttcaagcatg tgaaatacta gtgaccagtt ccatttcttg acaccatgtt acgcccaatc
     4921 gtgaacgagt ccctcaagtt tagcctgcca gcagccgatg tcctgaccga gtcgttgatc
     4981 tctggtctgc cagacttcaa gagctgtcga tggctgcgag aaaccacctc gaccaacacc
     5041 aacctgctag ccacact
//
LOCUS       DATBNL010000200         3850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_141704, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000200 DATBNL010000000
VERSION     DATBNL010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3850
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141704"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..823)
                     /locus_tag="VIC30_03325"
     CDS             complement(17..823)
                     /locus_tag="VIC30_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY7803449.1"
                     /translation="MQRNIDSSSAQVTESGPMAIQVIERATRLLDALAGEREPVSLKV
                     LAATTGLHPSTAHRILNDLVVARYVDRVDNGVYQLGMRLLELGSLVRGRLNVREAAID
                     AMQALHKLTGQTVNLSIQQGDEIVYVDRAWSERSGMQVVRAIGGRAPLHLTSTGKLFL
                     SVADPRQVRAYVTRTGLAGTTRNSITNFEGLDRELALVRRHGYARDNEELEMGVRCIA
                     AGIRDDTGRLVAGLSISAPTERMQDGWVQQLVETARTISGALGFEPGRSS"
     gene            complement(995..1918)
                     /locus_tag="VIC30_03330"
     CDS             complement(995..1918)
                     /locus_tag="VIC30_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEY7803450.1"
                     /translation="MKQTEQEKTEQTEQSQESQESHERQQTQHSQQAEQPTPRFGLVV
                     VGDEILSGRRQDKHFPKVIEMLGERGLQLSWVRLVPDDREILTDALTQTFASGDEVLC
                     CGGIGATPDDHTRQAAAAALGLPLSLHPEAEREITLRCADMAAKGQGTDDMSAPENQQ
                     RLQMGVYPVGAEIVPNPYNRIPGFYIRRHTFVPGFPVMAWPMLEQTLDTRYAVFHHPV
                     VQDEWSFISYGVPEARITPALVAVQERWPGVRAFSLPSVGEDGQSPHIELGVKGPSEH
                     LAAALAYLREQATALGAKLLAPVSRKGTRIE"
     gene            complement(1953..2756)
                     /locus_tag="VIC30_03335"
     CDS             complement(1953..2756)
                     /locus_tag="VIC30_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008158749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEY7803451.1"
                     /translation="MSQVQQSSPASNARGMLGRDVTQAFWRALRSQMHPRMIFALFLP
                     FIVMMVLVIVLLWLGWGPLTDWLGNALSESSVPGAVDPVIGTTAFLALKAWLIPVVAA
                     FILLPLAGIGGLAVAAVWVMPLVLAHVGRRDYPDVDARGRHATAISVWNATWVSVLFV
                     AGWLITMPLWLFPPLGLVVSLLLWTFAFNRMMRVDAVVDHASVQERQILWRERSAGFW
                     VMGLVCSLINLIPPAWVFLPVFAGLVYAHFSFEALRQLRRDPIIEMDQA"
     gene            2860..3258
                     /locus_tag="VIC30_03340"
     CDS             2860..3258
                     /locus_tag="VIC30_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011299538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY7803452.1"
                     /translation="MPADLSAVLPNSAQLQQRLGAPIELLVACYCAAWCDTCGVYRER
                     FDALASRHPEHAFVWIDIEDYPDLLGDEDVENFPTLLIERNGDVLFFGTMLPHIEQLE
                     RLIETFSNNPGAAPLETRLPNLLRTLATEN"
     gene            complement(3387..>3850)
                     /locus_tag="VIC30_03345"
     CDS             complement(3387..>3850)
                     /locus_tag="VIC30_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEY7803453.1"
                     /translation="GRTGRAGASGDAISLYTPAQEKLLVEVEKLIKRSIERGQLDLPA
                     SARASARGEQRSTGKSSERGERSARPERSDRGDRGDRNERPGNKGRSYRDPARQQPVD
                     EFFLKPYEPSSTASSAPSQSTSNKPAPANAGVGVLLGGKPKSQADSSSKQG"
BASE COUNT          915 a         1137 c          974 g          824 t
ORIGIN      
        1 ccacactaac agcagcttag ctagagcgac cgggctcaaa cccaagcgcc ccggagatcg
       61 tgcgggccgt ttcaacaagc tgttgtaccc agccatcttg catgcgctca gttggcgctg
      121 agatcgacaa acctgcgacc aatcgacctg tatcgtcgcg gataccagcc gcaatgcacc
      181 gcacacccat ctcaagctct tcgttgtcac gtgcatagcc gtgacgccta actaacgcca
      241 actctcggtc caacccttca aagttggtaa tactgttgcg cgtggtacca gctaaacccg
      301 tgcgcgtgac ataagccctg acctgccttg ggtcagccac cgacaaaaac aacttacccg
      361 tcgaggtcag gtgtaatggc gcacgcccac caatggctcg caccacctgc atgcctgagc
      421 gctcactcca ggcccgatcg acgtagacga tttcatcgcc ttgttgaatc gacaaattca
      481 ctgtctggcc cgtgagcttg tgcaaagctt gcatggcgtc gatcgccgct tcgcgcacat
      541 tcaatcgacc gcgtaccaag gagccaagtt ctagcagacg catgccaagt tggtagacac
      601 cgttgtcaac ccgatccaca taacgtgcca ccaccaagtc attaagaatg cgatgtgccg
      661 tcgaggggtg taaacctgtg gttgccgcca gtacttttaa cgatacaggt tcacgctcac
      721 cggccaaagc atcaagcaag cgcgtggcgc gctcaatcac ctgaatggcc atgggacctg
      781 attcagttac ctgagccgat gaggaatcga tattacgctg catatgagca ttcacaaagt
      841 cagatgcaag agcacgcaca attgcggcac cgcaacaaat accatgtcat attatgaaag
      901 atagatccac attgcaagtg gttagtgctc tatggttggc gatacgtggg gcaccgccac
      961 cctggatgct cgcggttagc tagatacatc acagctattc gatgcgcgtg cctttgcgtg
     1021 aaacgggcgc tagcagcttg gcaccgagcg ccgtcgcctg ttcacgcaag taagccagtg
     1081 ccgcagcgag atgttcgcta ggacctttga cgccaagctc gatgtgtggt gattggccat
     1141 cctcacctac tgatggcagg ctaaaggctc gaacccccgg ccatcgctct tgcactgcca
     1201 caagcgccgg cgtaatacgc gcctcaggca ccccgtagct aatgaaagac cattcgtctt
     1261 gcaccaccgg atggtggaag accgcataac gtgtgtctaa ggtttgctca agcattggcc
     1321 aagccatgac gggaaatccg ggcacaaacg tgtgacgacg aatgtaaaaa cccggaatgc
     1381 ggttgtacgg attgggcaca atctcagcgc ccacgggata cacccccatt tgcagtcgct
     1441 gttgattctc tggtgcgctc atgtcatcgg taccctgccc cttggcagcc atgtcggcac
     1501 aacgcaaggt gatctctcgt tcggcctcgg gatgcagcga caacggcagc ccaagtgcag
     1561 cagcggccgc ctggcgcgtg tgatcatcgg gcgtcgcgcc aataccaccg caacacagca
     1621 cctcatcacc gctggcaaag gtttgcgtta acgcatcggt caatatctca cggtcatctg
     1681 gcactaaccg gacccacgac aactgcaatc cacgctcgcc caacatctca atgactttgg
     1741 gaaagtgctt atcttggcgc cgaccagaga gaatctcgtc accaacgacc accagcccaa
     1801 accttggcgt gggctgttcc gcttgctggg agtgttgggt ttgctgtctt tcgtggcttt
     1861 cttggctttc ttggctttgt tcagtctgtt cagttttttc ttgttcagtt tgtttcattc
     1921 tttttgcatc caaatcttgg ttaaaacacg gctcacgctt ggtccatctc aatgatgggg
     1981 tcacgacgta actggcgtag cgcctcgaaa ctgaaatggg catataccaa gccagcaaac
     2041 accggtaaaa acacccaggc cggtgggatc aagttaatca gtgagcacac caaacccatg
     2101 acccagaagc ccgcactgcg ttcacgccac aggatttgcc gctcttgcac actggcatga
     2161 tcaaccacag catccacgcg catcatacgg ttaaacgcaa aggtccatag cagcaaacta
     2221 accaccaacc ccagtggtgg aaacaaccaa agcggcatgg taattaacca tcctgccaca
     2281 aacagcactg acacccaggt agcattccag acactgatgg ccgtggcatg acgcccgcgg
     2341 gcatccacat ccggatagtc acgccggccc acgtgcgcta acaccaacgg catgacccaa
     2401 accgcagcca cagccaaacc accaataccg gccaatggca acaaaataaa ggccgctacc
     2461 accggaatca accatgcctt gagcgctaga aacgcggttg tgccaatgac cggatcaact
     2521 gcgcccggca cggatgactc agacaatgca ttacctaacc aatcggtcag tggcccccaa
     2581 cccaaccaca acagcacaat gacaagcacc atcatgacaa taaagggcaa gaacaaggcg
     2641 aagatcatgc gcggatgcat ttgcgaacgc aatgcccgcc agaacgcttg cgtgacgtcg
     2701 cgcccgagca tgccgcgcgc attcgatgcg ggagaagatt gttgcacttg actcataaga
     2761 aactcttcag cagtcgtcta gctgcacctt ggtggttaat accgatatga tagacaaata
     2821 catccgtctt tcatgttttt agaggcctta acgatccaca tgcctgctga cctatccgcc
     2881 gtgctaccga actctgctca attgcaacaa cgccttggcg cgccaattga gctgctagtg
     2941 gcttgctatt gcgcggcctg gtgtgacaca tgcggcgtat atcgcgagcg gtttgatgca
     3001 ctggcctcgc gtcaccccga acatgctttt gtgtggatcg acattgagga ctatcctgat
     3061 ttgttgggcg atgaagacgt cgagaacttt ccgacgctgc tcatcgagcg caacggtgat
     3121 gtgttgtttt ttgggacgat gctgccacac attgagcagc tagagcgact aatcgaaacc
     3181 ttttcgaaca acccaggcgc agcgccatta gagactcgct tgcctaatct actgcgaaca
     3241 cttgcaacag agaactaggc aaactcattg gttgtgattg cggttgcggt tgcggttgcg
     3301 gtcgctcggt ttaaggcaga tctaaatccg cgctaaaact ctcagaccct caccctagca
     3361 ctaaccttgc ttgctaacct tggttgctaa ccttgcttac tgctggagtc ggcttggctt
     3421 ttgggtttgc cgcccaacaa tacaccgacg ccggcattgg ctggcgctgg cttgtttgat
     3481 gttgactggc tcggcgcact tgatgcagta gaagatggct cgtagggctt taagaaaaac
     3541 tcatcaactg gttgttggcg cgctggatca cggtaagatc ggcctttgtt gccaggccgt
     3601 tcgttacggt ctccacggtc gccacgatca ctgcgctcag gacgagctga gcgctcacct
     3661 cgctcagaag acttgcccgt agagcgttgt tcgccacggg cactagcgcg agcactagca
     3721 ggcaagtcaa gctggccacg ctcgattgaa cgtttaatca gcttttctac ttcgaccagt
     3781 agtttctctt gcgcgggagt gtagagtgaa atcgcatcac cggaggcgcc ggcgcggccg
     3841 gtgcgaccaa
//
LOCUS       DATBNL010000201         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_191353, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000201 DATBNL010000000
VERSION     DATBNL010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191353"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..815)
                     /locus_tag="VIC30_03350"
     CDS             complement(72..815)
                     /locus_tag="VIC30_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019560501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEY7803454.1"
                     /translation="MSDSTTSDSTIGDSTMPIKAAVFDAYGTLFDVFAVTDALERCCP
                     GKGAAIAQLWRDKQIEYSRLISLSDPSVTGSRYYEPFWSLTCKALEYALQRFDAKLDD
                     GEVKSVLDQYHALDAFPENAGVLQQLKQAGIQTAILSNGDPAMLDGAVRAAGFESLID
                     CQLSVDEIKHFKTTPQAYALVEQRLGAKPAQVLFVSSNGWDVMAAGWFGFTTCWINRA
                     GLPVETLGPQPTHVGRDLTAVLSAIGQAG"
     gene            complement(826..1527)
                     /locus_tag="VIC30_03355"
     CDS             complement(826..1527)
                     /locus_tag="VIC30_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006025282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEY7803455.1"
                     /translation="MIDLYYWPTPNGHKITMLLEEAGLDYQIKPVNIGRGEQFEPDFL
                     KIAPNNRMPAIVDHAPTDGGEPIPMFESGAIMLYLADKVGQFIPSDVRGRCMTLQWLF
                     WQMGGLGPMAGQNHHFVQYAPERIPYAMDRYVNETSRLYGVLNKHLSDGRAFVAGDAY
                     TIADMASYPWIVPHKNQQQDLADYPHLARWFETIAKRPGTIAAYKAGEGIAQGPTVDE
                     EAKKILFGQTAKTVK"
     gene            1629..>2143
                     /locus_tag="VIC30_03360"
     CDS             1629..>2143
                     /locus_tag="VIC30_03360"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HEY7803456.1"
                     /translation="MELSVSEWVLWLALVLGVIYGVIAQVSGFCLNSALRQQLTSNNG
                     NKLRAFALALFVAMLGSQTLDALGIVDLSQSIYQTPEASWILTVVGGILFGFGMIRAR
                     GCGARSLVLLGQGNLRSLVVLLVIGITAYMTLSGVFGSLRSDLTAATLVSTEAGTFTT
                     EAGRWAFIIGFG"
BASE COUNT          484 a          567 c          568 g          524 t
ORIGIN      
        1 gcatcgattg atcgatcgcg acggcgtctt cgatcacatg tcgctagcaa aaaaacacta
       61 gccaagcacc actagcctgc ttggcctatg gcgcttagca cggctgtcag atcacgacca
      121 acatgagttg gttgtggtcc caaagtctct accggcaatc ccgctcgatt gatccagcaa
      181 gtcgtgaacc caaaccagcc ggcagccatc acatcccaac cgttgcttga gacaaacaac
      241 acttgagcgg gcttggcgcc caagcgttgc tcaaccaacg cgtaggcttg cggtgtggtc
      301 ttaaagtgct tgatctcatc gaccgaaagc tggcagtcga tcaacgactc aaagccagcg
      361 gcacgcacag cgccatcgag catggcagga tcaccgttag acagaatcgc cgtctggata
      421 cccgcttgct ttaactgctg caagacacca gcgttttctg ggaaagcatc taaggcatgg
      481 tactgatcga gaacggactt gacctcacca tcatcgagct tggcatcaaa gcgctgcaac
      541 gcatactcaa gcgctttgca ggttaacgac cagaacggtt cgtagtagcg actgcctgtg
      601 acgcttgggt cagacaagct gatcaaacga gagtattcaa tttgcttgtc gcgccacagc
      661 tgcgcaatgg cagcaccctt gcccgggcaa cagcgctcaa gcgcatcggt gaccgcaaag
      721 acatcaaaca atgtgccgta ggcatcgaat accgcggctt tgattggcat ggtgctgtca
      781 ccaatggtgc tgtcactcgt ggtgctgtca ctcatggcgc ttgcctcact tgacggtttt
      841 agcggtttgg ccaaatagga ttttttttgc ctcttcatcc acggtggggc cctgcgcaat
      901 cccctcgcca gctttataag cggcaatcgt gcccggacgt ttggcaatgg tttcaaacca
      961 gcgtgccaaa tgcgggtagt cagccaaatc ctgctgctgg ttcttgtgcg gcacaatcca
     1021 cgggtaactg gccatgtcag caatcgtata ggcatcacca gccacaaatg cacgaccgtc
     1081 cgagaggtgc ttgttcagca cgccgtagag ccggctggtc tcgttgacat agcgatccat
     1141 ggcgtaagga atacgttcag gtgcgtactg cacaaaatgg tggttttgcc cggccattgg
     1201 acctaagccg cccatctgcc agaaaagcca ctgcagagtc atgcatcgcc ctctgacgtc
     1261 agaaggaata aactgaccta ctttgtctgc gagataaagc atgatggcgc cggattcgaa
     1321 catcggaatc ggctcgccac cgtcggtggg cgcatgatca acaatggcag gcatgcgatt
     1381 attgggggca atttttagga aatccggctc aaactgctca ccacggccga tgttcactgg
     1441 tttgatttgg tagtccagac cagcctcttc taacaacatg gtgattttgt ggccgtttgg
     1501 tgttggccag taatacaagt caatcattcg aacttcctta aaaaagctta ttgccaattc
     1561 gtatttgtgc cagtggctat gtctggcgta ctttaacgtt ctgaccaaga caaataagat
     1621 caggttatat ggaactctct gtctcagaat gggtattgtg gctagcactg gtgcttggcg
     1681 tgatctatgg tgtgatcgct caggtctcag gcttttgtct taacagcgca ctcagacaac
     1741 aactcacgtc gaataacggt aacaagttgc gcgctttcgc gctagcgttg tttgtcgcca
     1801 tgctcggctc ccaaacacta gatgcactgg gcatcgtgga cttgtcacaa agcatctacc
     1861 agacccctga agcatcctgg attctcacgg ttgtgggtgg gattttgttt gggtttggca
     1921 tgattcgcgc tcgcggctgt ggtgcccgtt cgctggtgtt gcttggccaa ggtaacttgc
     1981 gcagcctggt ggtgttgctg gtcatcggca ttaccgctta catgacttta agtggtgtat
     2041 ttggtagttt gcgtagtgac ttaacggcgg cgaccctagt gtccacagaa gcgggcactt
     2101 tcaccactga ggcaggacgc tgggctttta tcatcgggtt tgg
//
LOCUS       DATBNL010000202         2227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_122060, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000202 DATBNL010000000
VERSION     DATBNL010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122060"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..902
                     /gene="dapE"
                     /locus_tag="VIC30_03365"
     CDS             <1..902
                     /gene="dapE"
                     /locus_tag="VIC30_03365"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEY7803457.1"
                     /translation="QSDPFVPTLKGGHLYGRGASDMKSSIAAFVVGIEEFVRAHPDHA
                     GSIALLITSDEEGPAIDGTVKVCDYLKQVGQTPDFCVVGEPTSVSAFGDTIKNGRRGS
                     MSGKLTVKGKQGHIAYPHMAINPIHRATPALNDLINELWDEGNDYFPATSFQISNIHA
                     GTGAGNVIPGDITIDFNFRFCTESTPETLQTRTAAILKRHDLDYQLDWTVSGLPFLTP
                     KGELSQALSAAIEQTTGKAPSLSTTGGTSDGRFIAQICPQVIEFGPTNATIHQVNENI
                     EVAQLEPLKDVYRRTLEQLLVHV"
     gene            895..1791
                     /gene="prmB"
                     /locus_tag="VIC30_03370"
     CDS             895..1791
                     /gene="prmB"
                     /locus_tag="VIC30_03370"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY7803458.1"
                     /translation="MSDPCNTLITVRDWLRYAVSQMHEHRVEVGQGTQSIWDDAVFLV
                     LRTLHLPIDQLDPFLDARLLPHECERLSLNINQRCLERIPTAYLVQEAWLAGYRFRVD
                     AQVLIPRSPVSELLSMQLLPWIDNPDDIRRIADVCTGSGCLAILAALSFPQARVDATD
                     LSESALQLAQANINDYGLEDRVELHQGDLLHALPENTQYDLIICNPPYVNADSMSKLP
                     AEFEHEPSLALAGGTDGMDLVRDLIADARHYLTADGVLILEIGHEAAHFEAAFPDLDP
                     LWLDTAATERNILLLGAAQLPS"
     gene            1788..>2227
                     /locus_tag="VIC30_03375"
     CDS             1788..>2227
                     /locus_tag="VIC30_03375"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803459.1"
                     /translation="MIRSAGLVIRRGTQLLLDEAEFVVHPGERVGLVGRNGCGKSTLF
                     ALMRGEIESDAGDLQIPEGWRMASVAQTIIGGERSATDYVLDGHEELRELQRQRQLAE
                     VEDVSGEHIANLEIALEQAGAWQAQSTAQSLLAGLGFPPQDWDKP"
BASE COUNT          503 a          630 c          584 g          510 t
ORIGIN      
        1 ggcagtctga tccttttgtg cccacactaa agggcggaca cctctatggt cgtggcgcct
       61 ccgacatgaa atcttcaatt gcggcctttg tggtcggcat cgaagagttt gtgcgcgctc
      121 accccgacca tgcagggtcg attgcgctat taatcacgtc agacgaagaa ggccctgcca
      181 ttgatggtac agtcaaggtg tgtgactatc taaaacaagt cggccagaca ccagactttt
      241 gtgtggtcgg tgagcccact tcagtctcgg catttggcga cacaattaaa aatggtcggc
      301 gtggctccat gtccggcaaa ctcactgtca aaggcaagca aggtcacatt gcctaccccc
      361 acatggccat taacccgatt catcgggcca cgccagcctt aaatgacctg atcaatgaac
      421 tctgggacga aggtaatgac tattttccag caacctcatt tcagatttca aacatccacg
      481 ccggtaccgg cgctggcaat gtcattccgg gtgacatcac cattgatttc aatttccggt
      541 tttgcaccga gtctacgcct gagacgttgc agacccgaac tgccgccata ttgaagcgcc
      601 atgaccttga ttaccaactc gattggaccg tcagcggact acccttctta acacccaagg
      661 gtgaactaag ccaggcgttg tcagcagcca ttgaacaaac cactggtaaa gcaccgagcc
      721 tctcgaccac aggcggcacc tcagacggac ggtttattgc gcagatctgc ccacaggtca
      781 tcgagttcgg gcccaccaat gccacgattc atcaagttaa tgagaacatt gaagtcgcgc
      841 agcttgaacc cttaaaagac gtgtatcgac gaacccttga gcagttgctt gttcatgtct
      901 gacccatgca acacgcttat aaccgtccgt gattggcttc gatacgcggt cagtcaaatg
      961 catgaacacc gtgttgaggt tgggcaaggc acgcaatcga tttgggatga cgccgtcttt
     1021 ttggtgttgc gcacactgca cctgccgatt gatcagttag acccctttct cgatgcgcgc
     1081 ttattgcccc acgagtgcga gcggctcagt ctgaacatca atcagcgctg ccttgaacgc
     1141 attcccacgg catatttggt tcaggaagcc tggcttgcgg gctatcggtt tcgggtagat
     1201 gcccaagtct tgattccacg ctcacccgta agtgagctgc tatcgatgca gctcttgcct
     1261 tggattgaca atcctgacga catccgacgc atcgctgacg tttgtactgg cagcggctgc
     1321 ctagcgattc tcgcggcgct gagtttcccg caagctcgtg tagatgccac cgacctcagt
     1381 gaatcggctt tgcaactcgc acaggccaac atcaacgact acggcctaga agatcgtgtc
     1441 gagcttcacc agggtgatct gctccatgcg ttgcctgaaa acacccaata tgacctcatt
     1501 atctgcaacc caccttacgt caacgctgat tcgatgagca agttacctgc tgagtttgag
     1561 catgagccca gcctggcgtt ggccggcggc accgacggca tggatctggt tcgtgatctg
     1621 atagccgatg cgcgccacta cctgacagcc gatggtgttc tgattctaga aattgggcat
     1681 gaggcggcgc actttgaagc agcctttccc gatcttgatc cgttgtggct cgataccgct
     1741 gcgaccgaac gaaacattct gctgctaggc gcagcacagt taccatcgtg attagaagcg
     1801 ctggccttgt catccgtcgt ggcacccaat tactgctaga tgaagccgaa tttgtcgtgc
     1861 accccggtga gcgtgtcgga ttggtgggac gcaatggttg cggcaaaagc acgctctttg
     1921 cattaatgcg cggtgaaatc gaatccgatg ccggcgatct acagatccct gagggttggc
     1981 gcatggccag cgtggcacag accatcatcg gtggtgagcg tagcgccacc gactacgtcc
     2041 tggacggtca cgaagagttg cgtgaactgc agcgccagcg tcaactggcc gaagtcgaag
     2101 atgttagcgg tgaacacata gccaacctcg agattgcgct tgagcaagcc ggtgcctggc
     2161 aggcacaatc aacggcccaa tcgcttttag ctgggctggg atttcccccg caggactggg
     2221 ataagcc
//
LOCUS       DATBNL010000203         1539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_161895, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000203 DATBNL010000000
VERSION     DATBNL010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161895"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VIC30_03380"
     CDS             complement(<1..363)
                     /locus_tag="VIC30_03380"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY7803460.1"
                     /translation="MISRPSRRIALKLGLALAAVLVTLALLPTPASAQDSRSLVLLLR
                     HALAPGGGDPANFDVNDCATQRNLNDVGREQARDIGRQLKALGLSPTNVWSSQWCRSF
                     ETAELMDVGEVKPLPALNS"
     gene            555..1400
                     /locus_tag="VIC30_03385"
     CDS             555..1400
                     /locus_tag="VIC30_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013394075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HEY7803461.1"
                     /translation="MSDVIALVFDFDDTLAPDSTSGFLEHIGVDTAQFWSEHVDPLLA
                     TGWDPVPAYLYAMIELSRSDRYGQINQALLSNWGRTLPLHSGVESLFSRLRDQVRAVQ
                     PQVQLEFYLISSGIGDVVRHTRIAQEFTQIWASEFVYDEAGGIAFPKRIVSFTDKTRY
                     LFHVQKGIIGPSFESQPFEVNRKVPEDRLRVPFDQMVFVGDGYTDIPCFSLVRQAGGI
                     AFGVWDPKHRDKRSRAWGFIEDGRVNNLNQARYDEDAELYQWLEEAVISSAKRIAVKA
                     RMYRG"
BASE COUNT          335 a          374 c          461 g          369 t
ORIGIN      
        1 cgaattcaat gctggcaatg gcttgacctc accgacgtcc atgagctcgg ctgtctcaaa
       61 cgaacgacac cactggcttg accagacatt cgttggactt aatcccaacg ctttgagctg
      121 acgaccaata tcgcgcgctt gctcgcgacc gacatcattg agattgcgtt gtgtggcaca
      181 gtcattgaca tcgaagttgg ccggatcacc gcctccgggt gccaaggcat ggcgcagcag
      241 caataccaat gagcgcgaat cctgcgccga ggcaggggtg ggcagcaagg caagggtgac
      301 gagcacggcg gctagggcta agccaagttt gagggcgatt ctgcgcgatg ggcgtgaaat
      361 catattaggc atcctatgtc ttggaagtac acatcacggt agttgctcat gacaattgct
      421 catgattttg cgtgatgata aacgggtgaa cgagatgctt gaaccgttac actacggtgt
      481 tgcggggttt tgaatggttg atagggtcag caatcactgt ttcgctcggt ttgtcgacct
      541 gttagggggg atgcatgtcc gatgtaattg cactggtgtt tgattttgat gacaccttag
      601 cgcctgatag cacgtccgga tttctggagc acatcggcgt agacacggca cagttttggt
      661 ccgagcacgt cgacccgcta ttggcaaccg gctgggatcc cgtgcctgcc tacctctacg
      721 ccatgataga actgtcgcgt tctgaccgtt atgggcaaat caaccaggcg ttgttatcca
      781 attggggacg cacgctgcca ctgcattcgg gcgttgagag cctttttagc cgcctgaggg
      841 atcaagtgcg tgcggtgcaa ccacaagtgc aactcgagtt ttatctcata tcgagtggca
      901 tcggtgatgt ggtgcgtcat acccgtattg cgcaagagtt cacacaaatc tgggcttcgg
      961 agttcgtata tgacgaggcc ggcgggattg catttcccaa gcggattgtg agctttactg
     1021 acaagacacg gtatttgttt catgtgcaaa agggcattat tggcccatcc tttgaaagcc
     1081 agccctttga ggtcaaccgc aaagtgcccg aagatcgctt gcgtgtgccg tttgatcaga
     1141 tggtgtttgt gggcgatggc tacacggata ttccttgctt ctcactggtg cgccaggccg
     1201 gcggcatcgc gtttggcgtc tgggatccca agcaccgtga caagcgcagc cgtgcctggg
     1261 gttttattga agacggtcgg gtgaacaact taaatcaggc tcgctatgac gaggatgcag
     1321 agctgtatca atggctagaa gaggcagtga tcagttcggc caaacgtatc gcggtcaaag
     1381 cgcgcatgta tcgtggttag atggataact ctgccgtggc taactggcgt ggatgaatca
     1441 cgtggatgac gttcactaca tggcactagc catcgagcaa gccaagcgtg cccaagccgc
     1501 gggcgaggtg ccggtggggg ctgtgatcgt tgatgagca
//
LOCUS       DATBNL010000204         3271 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_132047, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000204 DATBNL010000000
VERSION     DATBNL010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132047"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VIC30_03390"
     CDS             complement(<1..379)
                     /locus_tag="VIC30_03390"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418549.1"
                     /note="catalyzes the formation of prolyl-tRNA(Pro) from
                     proline and tRNA(Pro); Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEY7803462.1"
                     /translation="MRASAFHISTIKEAPNDAEIASHQLMIRAGMIRKLAGGIYNYMP
                     LGLRTIRKVEAVIREEMDRAGALELLMPVVQPAELWQESGRWEKYGPELLRVKDRHGR
                     DFILQPTSEEVITDIARNEIKSWR"
     gene            467..1015
                     /locus_tag="VIC30_03395"
     CDS             467..1015
                     /locus_tag="VIC30_03395"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEY7803463.1"
                     /translation="MLDREGYRPNVGIILVNQKNQVFWGKRVREHAWQFPQGGIKHGE
                     SPVQAMFRELHEEVGLLPEHVRILGRTRDWLRYDVPDHFMRRESRGHYRGQKQIWFLL
                     RLVGRDCDVSLRATAHPEFDAWRWCQYWVSLDTVIEFKRGVYQQALNELSPLLFKQRK
                     HRARARARRGNRDLLAQTLDQA"
     gene            complement(989..1897)
                     /locus_tag="VIC30_03400"
     CDS             complement(989..1897)
                     /locus_tag="VIC30_03400"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019657572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803464.1"
                     /translation="MTTSSIQTRDYETLSPQKVAFLGLGVMGLPMAGHLAKAGHEVTV
                     YNRTETKSQNWVKEFGGKHASTPREAASGAAIVFCCVGNDDDLRSVVLGENGAFAGMG
                     QGAIFVDHTTASADVAKELSAEAAKHGLGFIDAPVSGGQAGAINGALTVMCGGDATIF
                     ETIKPLAMHYSKAVTLIGETGAGQLAKMVNQICIAGLVQGLSEGIAFGQAAGLDMKLV
                     LDVIGKGAAQSWQMDNRGHTMVDDKFDFGFAVDWMRKDLGLAMDEARRNGARVPVTAL
                     VDQFYADVQKLGGNRWDTSSLIKRLR"
     gene            2006..2419
                     /locus_tag="VIC30_03405"
     CDS             2006..2419
                     /locus_tag="VIC30_03405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803465.1"
                     /translation="MLDELDILASRIKKLVGRLNALTQESAELRQSLTTVTSERDRLA
                     AELQAEKAQQVELKQSLGSAQSVAQQTKTQAAQEQAALQGTLDLFRQENESMQSSLKT
                     REDEVRRLREVNEQARQRIDGVLEKLPGATAQENG"
     gene            2419..2715
                     /locus_tag="VIC30_03410"
     CDS             2419..2715
                     /locus_tag="VIC30_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEY7803466.1"
                     /translation="METVKSNILGRDYSLACPPEEKATLEAAVAHVGQLAGRIQGAGK
                     VSGNEKIAVMAAIQIAAELLVVKSPEGPLGNLSVGDFKRKIDDINAMLDAADAA"
     gene            2727..2911
                     /gene="ssrS"
                     /locus_tag="VIC30_03415"
     ncRNA           2727..2911
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VIC30_03415"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(2910..>3271)
                     /locus_tag="VIC30_03420"
     CDS             complement(2910..>3271)
                     /locus_tag="VIC30_03420"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020206826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEY7803467.1"
                     /translation="GELWGRPTELPWGMVFPGAQDGIARHPSQLYQFALEGVLLFIVV
                     WWFARNPKPVGQVSAVFLMGYGGLRFVAEFGREPDAFLGLLWANLSMGQWLCIPMVVA
                     GAWLYHYCGKARQQSHR"
BASE COUNT          730 a          850 c          913 g          778 t
ORIGIN      
        1 gccgccaact tttgatttca tttcgagcga tgtccgtgat gacttcctct gaagtgggtt
       61 gcaagatgaa atcacgcccg tgcctatctt tgactctaag taattcagga ccgtacttct
      121 cccagcggcc tgactcttgc cagagctcag ctggctgaac cactggcatg agcaactcca
      181 gcgcgccagc ccgatccatt tcctcgcgga tcactgcctc gactttgcga atcgtgcgca
      241 atcccagtgg catgtagtta taaatgccac cggcgagttt acgaatcatg ccagcccgaa
      301 tcatgagttg atggctggca atttccgcgt cgttgggagc ttctttgatg gtgctgatat
      361 gaaaggcaga tgcgcgcatg aggtgtgttg gggttattga ctagggtgaa tcggagatgt
      421 gttcttataa tctagcttaa ttgtattgaa ttcaacgagt gcggcgatgc tggatcggga
      481 gggttaccgc cccaatgtcg gcattatcct tgtaaaccaa aaaaaccagg tgttctgggg
      541 aaagcgggtt agggagcatg cttggcagtt tccgcaaggc ggtattaaac acggggaaag
      601 ccccgtacag gcaatgttca gggagctaca cgaagaggta ggtctgctgc ctgagcacgt
      661 ccggattttg gggcgcacgc gagattggct ccgatacgat gtgcctgacc actttatgcg
      721 ccgcgagtcg cgcggtcatt atcgtggtca gaaacaaatc tggtttttgt tgcggttggt
      781 cggtcgagac tgtgatgtta gtttgcgagc cactgcccat cccgagttcg acgcatggcg
      841 ctggtgtcag tattgggtgt cacttgatac cgttattgag ttcaagcgag gggtctatca
      901 gcaagcctta aatgagctct cgcctctact gttcaaacaa cgcaagcatc gcgcccgagc
      961 tcgggcgcga cgcggcaatc gcgatctgtt agcgcaaacg cttgatcagg cttgaagtgt
     1021 cccagcggtt gccaccgagc ttttgtacgt cggcatagaa ctgatccacc agtgctgtca
     1081 ctggcacgcg agcaccgttt cgtcgtgctt catccatggc tagtccgaga tctttgcgca
     1141 tccaatcaac ggcaaagccg aaatcaaact tgtcatcaac catggtgtga ccgcgattat
     1201 ccatttgcca gctttgtgcg gcgcctttgc caatcacgtc gagtactagc ttcatgtcta
     1261 gcccagcggc ctgtccgaag gcgatgcctt cggatagacc ctgaaccaac ccggcgatac
     1321 agatctggtt caccatcttg gcgagttgcc ccgcgcctgt ttcaccaatg agcgtgacgg
     1381 cttttgagta gtgcatcgcc agcggtttga ttgtttcaaa tatggtggcg tcaccgccac
     1441 acatcacggt taatgcgcca ttaatagcac cggcttgccc gcctgagact ggggcgtcga
     1501 tgaagcccag gccgtgtttg gctgcctcag ccgacaactc tttagccaca tctgcagagg
     1561 ctgtagtgtg atcaacaaaa atggcacctt gacccatgcc agcgaatgcg ccgttctcac
     1621 cgagcaccac gctacgcaaa tcatcgtcat tgcctacaca acaaaatacg atagccgcac
     1681 cactagcagc ctcgcgtggt gtgcttgcat gcttgccgcc gaactctttc acccagttct
     1741 gtgatttcgt ttcggtgcgg ttgtagacgg tgacctcgtg gcctgctttg gctaagtggc
     1801 ctgccattgg cagtcccatg acacctaggc caaggaaggc gactttttgt gggctaagtg
     1861 tttcgtagtc acgcgtttgt atgcttgatg ttgtcatgtt gtcatcctcg ggaaatatga
     1921 agtttttggg gttttcggtt gttgttgcag tctagtgtac aaaatcagcc atcacggttc
     1981 gcgaaatttg ttttacgata gcggcatgct tgatgaatta gatatcctcg cgagtcgaat
     2041 taaaaaactt gtcggtcggt taaacgcctt gacccaagag tctgctgagt tgcgtcagtc
     2101 gctaacaaca gtgactagtg agcgcgacag gttggcggct gagctacaag cggagaaagc
     2161 ccagcaagtt gagctcaaac agtctttggg ctctgcgcaa agcgttgctc agcaaaccaa
     2221 gacccaagcc gcacaagagc aagcggcgct gcaaggcacg cttgatttgt ttcgccagga
     2281 gaatgagtcc atgcaaagct cgctaaagac gcgcgaagat gaggtgcgtc gcctgcgcga
     2341 agtcaacgag caggctcgtc aacgtataga cggtgtgctt gaaaaattac ccggcgcgac
     2401 ggctcaggag aatggctaat ggagacggtc aaatccaata ttcttggtcg tgattattcg
     2461 cttgcttgtc cgcccgaaga gaaagcaacg ctcgaggcgg ccgtggccca cgtggggcaa
     2521 ttggcaggac gcattcaagg cgccggcaaa gtcagtggca acgagaagat cgcggtcatg
     2581 gctgctatcc agattgcagc tgagctgctg gtggtgaaat cacctgaagg gcccttgggt
     2641 aatttgtcag tgggtgattt caagcgtaag attgacgaca ttaatgcgat gcttgacgca
     2701 gcagatgctg cttagtcgcc aacaggttgt ccctgcggtg ttcgtgactt gaccttatag
     2761 tctctgaacc gatgcttatg gcacacaggt cgctggttag aagagtggga atgcgtgtct
     2821 cttgttagat gtgctcgaag cgcttcacga ggcggccgac cttgaaccta gggttcgaga
     2881 tgccggtctt gacggcatgc gcggggcatt tatcgatgtg attgctgcct ggctttgccg
     2941 cagtagtggt agagccaggc gccggcaacc accattggaa tgcacagcca ttgacccatg
     3001 ctcaggttgg cccatagcag gcccaaaaat gcatctggct cccgaccaaa ttcggcgaca
     3061 aaacgcaaac ccccgtatcc catcagaaac acggcactga cttgcccaac tggcttgggg
     3121 ttgcgggcaa accaccaaac cacgataaac agcagcacgc cttccagggc aaactgataa
     3181 agctgtgatg ggtggcgcgc gataccgtct tgcgcgccag gaaacaccat gccccatggc
     3241 agctcagttg ggcgtcccca tagttcaccg t
//
LOCUS       DATBNL010000205         4192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_191458, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000205 DATBNL010000000
VERSION     DATBNL010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191458"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3608)
                     /gene="rpoC"
                     /locus_tag="VIC30_03425"
     CDS             complement(<1..3608)
                     /gene="rpoC"
                     /locus_tag="VIC30_03425"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012415725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY7803468.1"
                     /translation="MKALLDLFKQVSHDERFDAIKIGIASPEKIRSWSYGEVRKPETI
                     NYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTVAKVRRERM
                     GHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIM
                     SDDDFLAKTEEYGDEFKALMGAEAVRELLRTINIDRDVETLRAELKATSSEAKIKKIS
                     KRLKVLEGFQKSGIKPDWMIMEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLELKAPEIILRNEKRMLQESVDSLLDNGRRGKAMTGANKRQLKSLADMIKGK
                     SGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFNRLEMMGLAA
                     TIKAAKKLVESQEPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAFNADFDGDQMAVHVPLSLEAQLEARTLMLASNNVLFPANGEPSIVPSQDIVL
                     GLYYATRERINGKGEGMFFTDVAEVQRAYDNKEVELQSRITVRLTQWSHDAHGEWVSS
                     VQRVETTVGRALLSEIMPRGLPFENMNRALKKKEISRLINQSFRRCGLRDTVIFADKL
                     MQSGFRLATRGGISIAMGDMLVPEVKAEILAKASNEVKEIDKQYSSGLVTSQERYNNV
                     VDIWGKAGDRVGKAMMDQLATEPVIDRHGNETHQESFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVTQDLVITETDCGTTQGYAMKALVEGGEVIEPLRERILGRVAAVDIVNPDSQET
                     AISAGTLLDEDMVDYIDQLGIDEVRVRTPLTCETRHGLCAHCYGRDLGRGTLVNVGEA
                     VGVIAAQSIGEPGTQLTMRTFHIGGAASRAAMASSVETKSAGTVGFASTIRYVTNPKG
                     ERVAISRSGEILIYGDNDRERERHKVPYGATLQVNDGETIKAGARLATWDPLTRPIIS
                     EYAGTLRFENIEEGVTVAKQVDDVTGLSTLVVITPKTRGGKTAQRPQIKLIADNGEEV
                     KIAGTDHSVNISFPVGALITIRDGQTVSIGEVLARIPQESQKTRDITGGLPRVAELFE
                     ARSPKDAGMLAEVTGTVSFGKDTKGKQRLVITDLDGVSHARPLRGRAHGECHIPAQT"
     gene            complement(3609..>4192)
                     /gene="rpoB"
                     /locus_tag="VIC30_03430"
     CDS             complement(3609..>4192)
                     /gene="rpoB"
                     /locus_tag="VIC30_03430"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006465494.1"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates; beta subunit
                     is part of the catalytic core which binds with a sigma
                     factor to produce the holoenzyme; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEY7803469.1"
                     /translation="QIDELTDGEVIELANNLRDGTPFATPVFDGASEREIRKMLELAY
                     PEELAQDLGLTESLTQAWLYDGRTGDQFERPVTVGYMHYLKLHHLVDDKMHARSTGPY
                     SLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDIGGRTKLYENIV
                     KGDHTIDAGMPESFNVLVKEIRSLALDMDLERK"
BASE COUNT         1029 a         1167 c         1013 g          983 t
ORIGIN      
        1 gtctgtgcgg ggatgtgaca ttcaccgtgg gcgcggcccc gcaagggccg agcgtgtgaa
       61 acaccatcga gatcagtgat gaccagacgt tgcttgcctt tggtgtcttt accgaaagaa
      121 acggtaccgg taacttcagc caacataccg gcgtctttcg gtgagcgcgc ttcaaaaagc
      181 tcagccaccc gtggcagacc accagtaata tcacgcgtct tctgagactc ctgcgggata
      241 cgcgcaagca cctcaccgat cgacacagtt tgaccatcgc gaatcgtgat cagcgcacca
      301 accgggaacg aaatattcac tgagtggtca gtgccagcga tcttgacctc ttccccattg
      361 tctgcaatca acttgatttg tggacgctga gcagtcttgc caccacgggt tttgggtgta
      421 atgaccacaa gcgtagacag accggtaacg tcatcaactt gcttagcaac cgtaacaccc
      481 tcttcgatat tctcaaaacg gagcgtaccg gcgtactctg aaataatggg gcgcgttagc
      541 ggatcccatg ttgccagtct tgcgcctgcc ttgatcgttt cgccgtcgtt gacctgcaag
      601 gtggcaccgt aaggcacctt atgacgctca cgctcacggt cgttatcacc ataaatcaaa
      661 atctcacctg aacgggaaat tgcgacgcgc tcacccttgg ggttggtaac gtaacgaatc
      721 gtactggcaa agccgaccgt accagcagac ttggtctcca cgctgctagc catagcggct
      781 cgcgaggcgg cgccaccaat gtggaatgta cgcatcgtta gctgggtacc tggctcacca
      841 attgactgag cagcaatcac accgacagct tcaccgacgt taaccaacgt gccacgacca
      901 aggtcacgac cgtagcagtg tgcgcaaaga ccatgacgag tttcgcaggt cagcggtgta
      961 cgtaccctaa cctcgtcgat gcctagctga tcaatgtaat caaccatatc ttcatctagc
     1021 aaggttcccg cagaaatcgc ggtttcctgt gaatcaggat tgacgatatc aacggcagcc
     1081 acgcgaccga gaatacgctc gcgtagcggc tcaatgacct caccgccttc gaccagcgct
     1141 ttcatcgcat aaccttgggt agtgccgcag tcagtttcgg taatcaccag gtcttgcgtc
     1201 acatctacca agcgtcgtgt caaataaccc gagttggcgg tttttagcgc cgtatcagcc
     1261 aaacccttac gtgcaccgtg agtagaaatg aagtactgga gtacattcaa tccttcacgg
     1321 aagttagcgg tgataggtgt ctcaatgatc gagccatccg gcttagccat caagccacgc
     1381 ataccagcaa gctgacgaat ctgggcagcc gaaccacgcg caccggaatc tgccatcatg
     1441 taaatggagt tgaaagactc ttgatgcgtt tcgttaccat gacggtcgat gaccggctcg
     1501 gtggcaagtt gatccatcat cgccttaccg acacggtcac cggccttgcc ccagatatca
     1561 accacgttgt tgtaacgctc ttgcgaagtg acaagacctg acgaatattg tttgtcaatc
     1621 tctttaactt cgttactggc cttagcaaga atctcggctt tgacctctgg gactaacata
     1681 tcacccatgg caatcgagat accgccgcgg gtcgcaagcc tgaaaccaga ctgcatcaat
     1741 ttgtccgcaa aaataacggt gtcgcgcaaa ccacaacgac ggaacgactg gttgatcagg
     1801 cgcgaaatct ccttcttctt gagtgcccgg ttcatgtttt caaagggcaa gccgcgcggc
     1861 atgatttcgg acaacagtgc tctaccaact gtcgtctcga cgcgctggac gctagaaacc
     1921 cattcgccat gggcatcgtg ggaccattgg gtcaagcgaa ccgtgattcg actttgcagc
     1981 tcaacttctt tgttgtcgta cgcgcgctgc acttcagcga cgtcggtgaa gaacatgcct
     2041 tcaccttttc cattgatgcg ctcacgtgtt gcgtagtaca gacccaacac aatatcttga
     2101 gacggaacga tggaaggctc gccgtttgcc gggaaaagta cattgttaga ggcaagcatc
     2161 aaagtgcgtg cttctaactg tgcttccagt gacaaaggca cgtgaacagc catttggtcg
     2221 ccgtcaaagt cggcgttaaa cgccgcacaa accagcgggt gcaattgaat ggctttgccc
     2281 tcaatgagca ctggctcaaa cgcttgaata ccgagacggt gcagcgtagg tgcccggttt
     2341 agcataaccg ggtgttctcg aatcacttct tcaagaatat cccaaaccac tggctcttgg
     2401 ctctcgacca gtttcttggc ggctttgatc gtcgcagcca gtcccatcat ttcgagacgg
     2461 ttaaagataa aaggcttaaa caactcaagc gccattaact ttggcaagcc acactggtgc
     2521 aacttcagcg ttgggcccac aacaatgacg gaacggccag agtaatcgac tcgtttgcca
     2581 agaaggttct gacggaagcg accgcttttg cctttaatca tgtcggcgag cgacttcaac
     2641 tggcgcttgt tcgcaccagt catcgctttg ccacgacgac cattatcaag caaggagtca
     2701 acagactctt gaagcattcg cttctcgttg cgtagaataa tttcaggtgc tttaagttcg
     2761 agcaagcgct tcaagcggtt gttacggtta atgacgcgac ggtataggtc attcaaatct
     2821 gatgtagcga accgaccccc atcaagcggc actaaaggac gcaggtcggg aggtagaacc
     2881 ggcagcactt ccatgatcat ccagtctggt ttaatgccag acttttggaa cccttccagt
     2941 actttgagcc gcttagaaat cttcttgatc tttgcttctg acgaagtcgc tttgagttca
     3001 gcccttaggg tctcaacgtc acgatcaata ttaatggtgc gaagcaattc acgaaccgct
     3061 tctgcaccca tcaaggcctt gaattcgtca ccatactctt cagttttggc aaggaagtca
     3121 tcgtcggaca taatctgccc gcgcttaagc ggtgtcatac ctggctcgat cacacaccac
     3181 gcttcaaaat aaagcacacg ctcaatatcg cgcaacgtca tgtcaagaac cataccgagg
     3241 cgtgatggca ggctctttaa aaaccaaatg tgtgcaactg ggcttgcaag ttcgatgtgc
     3301 cccatacgct cgcggcgtac tttagcaacc gtgacttcca caccacactt ttcacaaatg
     3361 acgccgcgat gctttaagcg tttatatttt ccacacaagc actcataatc cttaatggga
     3421 ccaaagattt tcgcgcaaaa taggccgtca cgctcaggct tgaacgtgcg gtagttaatc
     3481 gtctcaggct tgcgaacttc accatatgac catgaacgaa ttttttcggg tgaagcgata
     3541 ccaatcttga tggcatcaaa tcgctcatcg tgcgagactt gtttgaacag gtcgagtagc
     3601 gctttcattt atttacgctc caaatccatg tcgagcgcca aggaacgaat ttccttgacg
     3661 aggacgttaa aggactccgg catgccagca tcgatcgtgt ggtcgccttt gacaatgttt
     3721 tcgtacaact tggtacggcc accaatgtcg tcggacttga ccgtcaacat ttcctgcagg
     3781 gtgtaggaag caccgtaggc ctcaagtgcc caaacttcca tttccccaaa tcgctgacca
     3841 ccgaactgcg ccttaccacc aagcggctgc tgggtgacaa gcgagtatgg tccggtcgag
     3901 cgagcgtgca tcttgtcatc aaccaagtgg tgcagcttca agtaatgcat gtagcccaca
     3961 gtcaccggcc gctcaaattg atcgcccgtt cgcccgtcat atagccatgc ctgagtaaga
     4021 ctctcggtca agcctaaatc ttgggctagc tcttcagggt aagccaattc cagcattttc
     4081 cgaatttcac gctctgaagc accgtcaaac accggggtag caaacggcgt accgtcacgc
     4141 aggttattgg ccagctcaat gacctcgccg tcggtcaact cgtcgatctg ag
//
LOCUS       DATBNL010000206         1638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_102028, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000206 DATBNL010000000
VERSION     DATBNL010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102028"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /gene="pheA"
                     /locus_tag="VIC30_03435"
     CDS             complement(<1..250)
                     /gene="pheA"
                     /locus_tag="VIC30_03435"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEY7803470.1"
                     /translation="MDKDLQAKLLPLRQKIDSLDKEILALINERARTAQAVGELKHTH
                     HEPGPVFRPEREAQVIRDLQSDNTGPIGHQAVPLDDQSG"
     gene            complement(243..1388)
                     /gene="serC"
                     /locus_tag="VIC30_03440"
     CDS             complement(243..1388)
                     /gene="serC"
                     /locus_tag="VIC30_03440"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEY7803471.1"
                     /translation="MSKPRPWNFSAGPSVLPEPVLEQAAAEMLDWHGSGMSVMEMSHR
                     GAEFSQICDEAEADLRELLGVGDEFAVLFMQGGATAENAIVPMNLIGRSPERHADYVL
                     TGSWSTKSFKEAGKYGDAVVAATNNAPFEDQNGTFGPLTWVPAVADWRVRSTAAYLHL
                     CSNETIGGVEFMGWPDANTMASLGAPDVPLVIDASSHFLSRPMDLSGVGMLYAGAQKN
                     AGPAGVTVVIVRRELIGHALPICPSAFDYANVAKERSRFNTPPTYAIYIAGLVFKWLL
                     QQGGLPVIETANVTKANALYGYFDQSSFYRVPVHPSVRSRMNVPFTLADNSLDQAFLD
                     VARAVGLNQLKGHKSVGGMRASIYNAMPLAGVMALIDYLQWFEREHG"
     gene            complement(1395..>1638)
                     /locus_tag="VIC30_03445"
     CDS             complement(1395..>1638)
                     /locus_tag="VIC30_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEY7803472.1"
                     /translation="LITNSGVLVRTRVSEIREMGRATQGVTLISVDDGSHLSGVRRVA
                     ERDADAVLDDEDAEPVEGEGDGNTNGEAPAPDATPE"
BASE COUNT          382 a          487 c          427 g          342 t
ORIGIN      
        1 ggcccgattg gtcatcaagc ggtaccgctt gatgaccaat cgggccggtg ttgtctgact
       61 ggaggtcccg aatcacctgt gcttcgcgct cagggcgaaa cacagggcct ggctcatgat
      121 gagtgtgctt gagttcaccc acggcttgtg cagtgcgggc gcgttcgtta atgagcgcca
      181 gaatctcttt gtcgaggctg tcaatttttt ggcgcagcgg cagcaacttg gcctgcagat
      241 ccttatccat gttctcgctc aaaccattga agataatcga ttaaggccat cacaccggcc
      301 aacggcatgg cgttgtatat cgacgcccgc atgccaccaa cggacttgtg tcccttgagt
      361 tgattcaaac ccacggcacg tgcgacgtca agaaaggcct gatccagcga attgtcagcc
      421 aatgtaaaag gcacattcat gcgtgagcga acactcggat gaactggcac ccggtagaaa
      481 ctcgattggt cgaaataccc gtacaaagca tttgccttgg tcacattagc tgtctcgatg
      541 acgggcaaac caccttgctg cagcaaccac ttgaacacaa gccctgcgat ataaatggca
      601 tacgttgggg gggtattgaa gcgcgaacgt tctttggcga cattggcgta atcaaacgct
      661 gatggacaga ttggcaacgc atgcccgatc agttctcgtc gcacgataac caccgtgaca
      721 cccgcaggcc cggcgttttt ctgggcgccg gcgtaaagca tgcccacgcc cgacaagtcc
      781 attggacgcg acaagaaatg cgaagacgca tcaatgacca gtggcacatc gggtgcaccg
      841 agtgaggcca tggtgttggc gtcaggccaa cccatgaact cgacaccgcc gatcgtttcg
      901 ttgctacaca aatgcaggta agccgcggtc gaacgcacac gccagtcagc cactgcgggc
      961 acccaagtca ggggaccaaa cgtaccgttt tgatcttcaa atggtgcatt attggtcgct
     1021 gcaacaacag catcgccgta cttgccagct tctttaaaag acttggttga ccagctgccc
     1081 gtgagcacat aatcagcgtg tcgctcgggg ctacgaccga tcagattcat gggcacgatg
     1141 gcgttttctg cggtggcacc gccttgcata aacagcactg caaactcgtc accaacacca
     1201 agcagctctc gcaagtcggc ctcggcctca tcacagattt gtgagaactc ggcaccgcga
     1261 tgactcatct ccatgaccga catgccgcta ccatgccaat caagcatttc agcagcggct
     1321 tgttcaagca ccggctcagg cagaacggag ggcccagcag aaaaattcca cggtctcggc
     1381 ttactcatga tggcttactc aggcgtagcg tctggggcag gcgcctcacc atttgtgttg
     1441 ccgtcgccct caccttcaac cggctctgca tcctcatcgt ccaagacagc gtctgcatca
     1501 cgctcagcca cacgacggac cccggacaga tggctgccat catccacgct aattaacgtg
     1561 acgccctgtg tggcacgacc catttcacgg atttccgaca cacgtgtgcg aaccagaaca
     1621 ccgctgttgg tgatcagc
//
LOCUS       DATBNL010000207         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_191462, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000207 DATBNL010000000
VERSION     DATBNL010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191462"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..995
                     /locus_tag="VIC30_03450"
     CDS             219..995
                     /locus_tag="VIC30_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydro-lyase"
                     /protein_id="HEY7803473.1"
                     /translation="MLESEQVRLDARGGKLNAPTAGLAYGFVQANLVILPASDAMDFL
                     VFCQRNPKPCPLLGVSTPGDTGIARLGENLNIATDLPRYRVWKDGELTEECPDVSHLW
                     RDDLVSFALGCSFSFEEALLEQGLELRHITQGCNVPMYRTNVPTQAAGKFHGPLVVSM
                     RPFKPADAIRAIQITSRFPDVHGAPIHLGDPALIGIKDIHKPDYGDPVTLKDGEMPVF
                     WACGVTPQSVLMASKPKFCITHAPGYMLVTDLKNTALAVL"
     gene            1103..1402
                     /locus_tag="VIC30_03455"
     CDS             1103..1402
                     /locus_tag="VIC30_03455"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY7803474.1"
                     /translation="MRLTEHEIQIIRDTAHEVFGQNIRIILFGSRVDDAAKGGDIDLM
                     IETREEIDRPALLSARVASRVSRSLSGRAVDVVLKAPNLKTQPIHDIATQSGIVL"
     gene            1399..>1792
                     /locus_tag="VIC30_03460"
     CDS             1399..>1792
                     /locus_tag="VIC30_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803475.1"
                     /translation="MSIEKGLRTRLDFLATATKKESAYLQQTDSRLFSGHLTTDNIQS
                     MIADPTMSERLEAFIGRFGRLQDMLSDKFLPSLLTALAEPKSSALENLDRAEKLGLIE
                     SANQWLEIRKLRNQMVHEYIDDLEVLRDA"
BASE COUNT          445 a          483 c          425 g          439 t
ORIGIN      
        1 ttaatactgc tttggttatt gctttgagta ttgccttgag tattgcctca atccttcact
       61 cactctaaag tagcgcaaca cctaagacaa gacatccttc acagacaccc ttcacaagcc
      121 atcgcccgca cagcaaatca gtcgcggtct ggctttctag gcgctatcat gaagccaata
      181 tttagcgtcc cgtcatgagc caacccggag tcattttcat gctcgaatca gaacaagtgc
      241 gtctcgatgc ccgtggcggc aaactcaatg caccgaccgc cggcttggct tacggatttg
      301 tgcaggccaa ccttgtgatc ttgccagcaa gtgacgccat ggattttttg gtgttctgtc
      361 aacgtaaccc caaaccctgc cccttacttg gcgtaagcac cccgggtgat accggtattg
      421 ctcggttggg ggaaaaccta aatatcgcca cagatctgcc acgctatcgc gtctggaagg
      481 atggtgaact gaccgaagag tgcccagatg tcagtcacct ttggcgtgac gatctggtga
      541 gctttgcgct cgggtgttcg ttctcttttg aagaggcgtt gcttgagcaa ggccttgagc
      601 tgcgccacat cacccaaggc tgcaatgtac ccatgtatcg caccaatgtg ccaacgcaag
      661 ccgccggcaa gtttcatgga ccattggtgg tgtcgatgcg cccgttcaag ccggccgatg
      721 cgatacgcgc catacaaatt accagtcgtt ttcctgatgt acacggcgca ccgattcacc
      781 ttggcgaccc cgccctcatc gggatcaagg acatccacaa acctgattat ggcgaccctg
      841 tcaccctaaa agatggtgaa atgccggtct tctgggcttg tggggtgacg ccacaatcag
      901 tcttgatggc cagcaaacca aagttttgta ttacccacgc gccgggctat atgctggtga
      961 ctgacttaaa gaatacagcg ctagcggtgc tttgactgat gtttcttagt tagtgtgttt
     1021 aatgtattgg gtcgccgttt ctgacaccca gtacataacc tatttaaccg attgaaaatt
     1081 caaatagatc atcgatacag ccatgcgcct taccgagcac gaaatccaga tcattcgaga
     1141 cactgcccac gaagtgtttg gccagaacat tcggatcatc ttgtttggct cacgcgttga
     1201 tgatgcagcc aaaggcggcg acattgatct gatgatcgag acccgtgaag aaatcgacag
     1261 acccgccttg cttagtgccc gagttgctag tagagtgtcg cgctcattgt ctggtcgagc
     1321 ggtagatgtt gtactcaagg caccgaacct caagacgcaa cccattcacg acatcgccac
     1381 tcagtcggga attgttttat gagtattgaa aaaggactac gcactcgctt ggattttttg
     1441 gcgacggcca ccaagaaaga atctgcctat ctacaacaga ctgacagtcg actcttctcg
     1501 ggacacctga caactgacaa catccaatcc atgattgccg acccaaccat gtctgaaagg
     1561 ttagaggcat tcattggtcg gttcggccgt ttgcaagaca tgctgagtga caaattttta
     1621 ccctcgctgc taacagcact tgccgaaccg aaatcctcag cactagaaaa cctcgatcgc
     1681 gcagaaaagc ttggattaat tgaatctgct aaccagtggc tagaaatccg caaacttcgc
     1741 aaccaaatgg ttcatgaata cattgatgac ctagaagtgc tgcgtgacgc cc
//
LOCUS       DATBNL010000208         1659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_122130, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000208 DATBNL010000000
VERSION     DATBNL010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122130"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1014
                     /locus_tag="VIC30_03465"
     CDS             <1..1014
                     /locus_tag="VIC30_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7803476.1"
                     /translation="CHADAVAQAFEYDHQTRVLASAPFCGAFGFATLIGGLLTGRAVV
                     CEPVSTADSLLKLVREHRVTHTYANNALILQMLKASNDQSDFASCKLFGFAAFAPAQD
                     ELFDLAQRNGLALTGLYGSSELLALTAAQPTRSDKGDLSVRYEPGGCLVHESARVRAR
                     DPETGHLVGTGESGEIEILTPSHMVGYLDQSEATQAAFTEDGYFKTSDLGWCVSEHQF
                     VFQTRMGDSLRLGGFLVNPAEIETVVQTLPGIAACQVVAIEFGAKSVPVAFVLLAKGV
                     EVQVDIEAWQAACKRQLAGFKVPVHFEVMEAFPMIESANSAKVQKHKLREIAQKRLGN
                     LHA"
     gene            1007..>1659
                     /locus_tag="VIC30_03470"
     CDS             1007..>1659
                     /locus_tag="VIC30_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008641638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803477.1"
                     /translation="MLDTLPNRVTDLPFFEKPHQSLARDLDDWARTNLKSRVHQGDVD
                     QHCRALVTELGKAGWLRWCVPASAGGALAELDSRSLCLARQTLGFYDGLADFAFAMQG
                     LGSGPISLFGTPQQQARYLPAVACGHAIAAFALSEPDAGSDAAAMTTRATRTGDHYCL
                     NGIKTWISNAGLADFYTVFARTENDESDGVTAFIVEANTPGLVVSERFDVSAPHPIGT
                     "
BASE COUNT          356 a          465 c          444 g          394 t
ORIGIN      
        1 tgccacgctg acgccgtcgc ccaagccttt gagtacgacc atcaaacccg tgtactggcc
       61 agtgcaccct tttgtggggc atttggtttt gcgaccctca ttggtggtct gttaacaggc
      121 cgtgcggtcg tttgcgagcc cgtctcaacg gctgacagtc tcttaaaact ggtacgtgag
      181 catcgagtca cccacactta cgctaacaac gccttgatct tgcagatgct aaaagcgtca
      241 aacgatcaaa gcgattttgc cagctgcaaa ctctttggat ttgccgcgtt tgcgccagcg
      301 caagatgagc tgtttgatct ggcacaacgc aacggcctag ccttaaccgg tctctatggt
      361 tcgagcgaat tgctagcgct gactgcagcg caacccaccc gttcggacaa aggcgatctc
      421 agtgttcgtt atgaacccgg tgggtgtctg gttcacgaat cagcccgagt acgcgcccgt
      481 gaccccgaga ctggtcacct cgtgggcacg ggtgagtccg gcgagattga aattctcaca
      541 ccatcgcaca tggtcggcta tctcgatcaa tccgaggcca cgcaagcggc ttttacagag
      601 gacggctact ttaaaacctc tgaccttgga tggtgtgttt ctgagcatca gtttgtgttt
      661 cagacccgca tgggtgactc gttgcgtcta ggcggctttt tagtcaaccc tgccgaaatc
      721 gaaaccgttg ttcaaacctt gccaggcatc gccgcttgtc aagtggttgc tatcgagttt
      781 ggcgccaaat ccgtgcccgt ggcgtttgta ttgttagcca agggcgttga agttcaggtc
      841 gatatcgagg cctggcaagc agcctgcaaa cgtcagttgg ctggctttaa agtgccggta
      901 cattttgaag tgatggaggc atttcccatg attgaaagtg ccaattcagc caaagttcaa
      961 aaacataagt tacgtgaaat cgcacaaaaa cgccttggga acctgcatgc ttgatacctt
     1021 accaaacagg gtcactgacc tgccgttttt tgagaagccg caccaaagcc ttgcccgaga
     1081 cttagatgac tgggcgcgca ccaatcttaa gagccgggtg catcaaggcg atgtcgatca
     1141 acactgccgt gcacttgtga cggaactagg caaagccggc tggcttcgtt ggtgcgtacc
     1201 ggcgtctgcc ggtggcgccc ttgctgaact cgactcacgc agcctgtgct tggcccgaca
     1261 gacgctgggc ttttacgacg gcctagccga tttcgcattc gccatgcaag ggctgggtag
     1321 tggacccatt tctttgtttg gcacgccgca acaacaagcc cgctacttgc cggcagtcgc
     1381 ctgtgggcat gccattgctg catttgcctt gtctgaaccc gacgccggct cagatgccgc
     1441 agccatgacc acgcgtgcaa cgcgcaccgg cgatcactat tgcttaaatg gcatcaagac
     1501 ctggatatca aatgccgggc tggctgattt ctatacggta tttgcccgaa cagaaaacga
     1561 tgagtccgat ggcgttaccg cctttattgt cgaggccaac acaccaggtc tggttgtcag
     1621 cgaacggttc gatgtcagtg caccccaccc cattggcac
//
LOCUS       DATBNL010000209         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_141870, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000209 DATBNL010000000
VERSION     DATBNL010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141870"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..965
                     /gene="yaaA"
                     /locus_tag="VIC30_03475"
     CDS             186..965
                     /gene="yaaA"
                     /locus_tag="VIC30_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009456706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEY7803478.1"
                     /translation="MLLLLSPAKKLDYDTPLGTKLHTDPLFVGEAKGLIDVLKNKSTS
                     DVAKMMSLSDSLAELNVQRFAQWSPKFTQQNARPAVLAFNGDVYEGLDAASLSESQLK
                     WAQDHVAILSGLYGVLRPLDLMQPYRLEMGTKLENPAGKNLYDYWQQTIAPYLNERLS
                     KDKQPVVVNLASEEYFKSVDLKVLNARVIQCVFQDEKAGTYKIISFYAKRARGLMARY
                     VIENQINTPDKLTGFNLDGYAFAPEVSSADKLVFRRPEQIT"
     gene            976..>1905
                     /locus_tag="VIC30_03480"
     CDS             976..>1905
                     /locus_tag="VIC30_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014191721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY7803479.1"
                     /translation="MASPQLDVSAYPRVALVLQGGGALGSYQAGVYEGLANAGIHPNW
                     VAGISIGALNCAIIAGNAPEKRVEKLHEFWETICMRPLMHPTMVSGHQDMFAEFTNPW
                     AGMMESMGHAMFSSFAAMSALVHGQDGFFKPRPLAPGGGAPDTTSFYDTTPLISTLER
                     LADFDRINSGETRVSLGATNVASGNFVYFDSTKHKLTPKHFIASGSLPPGFAATEIDG
                     EYYWDGGCVSNTPLEYVLGVTPRRDTLVFQVDLWSAEGPLPTDVLQITERLKDIQYSS
                     RTRTVTNAIHLMQRMRKALIDTVDRIPESVRAKD"
BASE COUNT          447 a          472 c          519 g          467 t
ORIGIN      
        1 ctgatttcga gtcaggtaca ttcgaccact ctgccacctc tccgctcgag gtcggtatct
       61 tagcagaaag catccaacgt tcgcttggcg gtgctcggtt gtctgcggct aactggcatt
      121 atttccacct atcgtcgctc aggtttgtta tcttgtaggt tgtggtgaat atggagaaac
      181 acggcatgtt gctgttgcta tcgccagcga agaagctgga ctacgacacg cctttgggta
      241 cgaaactaca caccgaccct ctgtttgtcg gcgaggccaa gggattgatc gatgtgctca
      301 agaacaagag cacctctgat gttgcaaaaa tgatgtcgct tagcgactcg ttagctgagc
      361 tcaatgtgca gcggtttgcg caatggtccc ccaaatttac ccaacaaaac gctcggcctg
      421 ctgtgttggc tttcaacggc gatgtctatg agggtttgga cgctgcatct ttgtccgaat
      481 cccagctgaa gtgggcgcag gatcatgttg ctatcttgag tggtttgtac ggcgtactac
      541 gtccgctgga tctcatgcaa ccttatcgcc tggaaatggg caccaagctc gaaaaccctg
      601 ctggaaagaa cctttacgat tactggcagc agaccattgc gccgtatttg aatgagcgct
      661 tgagcaaaga caaacagccg gttgtggtga acttggcctc tgaagagtat ttcaagtcag
      721 ttgacctaaa agtcctaaat gcgcgcgtga ttcagtgtgt gttccaggat gaaaaagccg
      781 gtacctacaa gatcatcagt ttctatgcca aacgggccag gggattgatg gcgcgatacg
      841 tgattgagaa tcaaattaat acacctgata aattgactgg attcaattta gacgggtatg
      901 ccttcgcacc agaggtttcg tctgccgaca aactggtgtt tcgacgaccc gaacaaataa
      961 cgtaatggag agtacatggc atcgccccaa ctagacgtat cagcatatcc gcgagtcgca
     1021 ttggttttac aagggggtgg tgccctcggt tcgtatcaag ccggtgtgta tgaaggtctg
     1081 gccaatgccg ggatacatcc gaactgggtt gccgggattt ctattggcgc cttgaattgc
     1141 gccattatcg cgggtaatgc gccagaaaag cgtgttgaga aattgcacga attctgggaa
     1201 accatctgca tgcgaccatt gatgcatcca acgatggtaa gcggacatca ggatatgttt
     1261 gccgagttta cgaacccttg ggctggcatg atggagtcca tgggtcacgc catgtttagc
     1321 tcttttgcgg cgatgtcagc attggtgcat ggtcaggatg gatttttcaa accaaggcca
     1381 ctagcgccag gcggcggtgc accagacacc accagttttt acgacacaac gccgctgatt
     1441 tcaacgctgg agcgcttggc tgattttgat cggatcaaca gcggtgagac gcgtgtatcg
     1501 cttggtgcga ctaatgtggc cagcggcaat ttcgtgtact tcgattccac caagcacaaa
     1561 ctaacgccca aacacttcat cgcgtcggga tcattgccac ctggctttgc ggccaccgaa
     1621 atcgatggtg agtactactg ggatggcgga tgtgtgtcca acacgccgct ggagtatgtg
     1681 ctcggcgtga ccccccgacg tgacacgctg gtgttccaag ttgatttgtg gagtgctgag
     1741 ggacctttgc caactgatgt gctgcaaatc accgaacggc tcaaggacat tcagtactcg
     1801 agccgaacgc gtacggttac gaacgccatt catctcatgc agcgcatgcg caaggccctg
     1861 atcgatacag tggatcgcat ccccgagagc gtgcgtgcca aagac
//
LOCUS       DATBNL010000210         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_42424, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000210 DATBNL010000000
VERSION     DATBNL010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42424"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VIC30_03485"
     CDS             complement(<1..401)
                     /locus_tag="VIC30_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0031564 - transcription antitermination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination protein NusB"
                     /protein_id="HEY7803480.1"
                     /translation="MTNPTKTPAPKTAPSARRRARELALQALYSWLVQSRAEDEQASE
                     FGAIEAHLRDDPEFELADQKWLAVLWQGCTQKASDLRETFMPFVDRPIQELSPVEHGV
                     LLIGTFELTRQVDVPYRVAINEAVELAKSFGG"
     gene            complement(410..922)
                     /gene="ribH"
                     /locus_tag="VIC30_03490"
     CDS             complement(410..922)
                     /gene="ribH"
                     /locus_tag="VIC30_03490"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003802371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEY7803481.1"
                     /translation="MSPYTISPDLNGEGLHIGIVRARFNEEIGFIQLEACLGELEALG
                     VDQRDIMVVSVPGALELGITLAQMAETGEFDALIALGAVIRGETYHFEIVSNESAASM
                     SRVALEMGVPVLNGVLTTEDEAQAHERAAGKGRDCAQGAVEMANLIAALEPEQADDDG
                     DDDDDTEQDR"
     gene            complement(919..>1843)
                     /locus_tag="VIC30_03495"
     CDS             complement(919..>1843)
                     /locus_tag="VIC30_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEY7803482.1"
                     /translation="SNGAAYGTNFTVSIEAAEGVHTGISVADRAHTIRTAVAKDAEPD
                     DLVQPGHIFPLRAVPGGVLVRAGHTEAGCDLTALAGLTPAAVICEILKPDGTMARLPD
                     LIEYCQTHQLKIGTIADLIQYRSEHESVVERVVRKDITTPWGPFCMTVYRDTVQGRPH
                     IALSKGEVGQDREVLVRVHEPTTVIDLLNAQGSGHSWGFDEAMKVVAQAPDAVVVLLN
                     ADTNAELVLNQAALLGQPDDANEQAGRWSKGMDLRTYGLGAQILRDLGVVRMRLLARP
                     RKMPSMMAGFGLTVTGYDEAPTDRIHPQETP"
BASE COUNT          389 a          581 c          480 g          393 t
ORIGIN      
        1 ccaccaaagg acttggcaag ctcgactgct tcgttgatgg caacccggta aggcacatca
       61 acctgacggg tcaactcaaa cgtaccgatt aacagcacac cgtgctcgac cggcgaaagc
      121 tcctgaatgg gccgatccac aaatggcatg aaggtttcac gcaaatcgct ggctttttgt
      181 gtgcagcctt gccacaacac ggcaagccat ttttggtcag ccagttcaaa ctctgggtcg
      241 tcgcgcaagt gcgcctcaat ggcaccaaac tcactggcct gctcatcttc agcacggctt
      301 tgcaccagcc agctatataa ggcctgtagc gctaactcgc gggctcggcg acgggcactc
      361 ggagccgttt taggcgctgg cgtttttgta ggattggtca tgacagctac tatcggtcct
      421 gctcggtgtc gtcatcgtcg tcaccatcat cgtcagcctg ctcgggctca agtgcagcta
      481 tcaaattcgc catctcaaca gcaccctgcg cgcagtcacg gcccttacca gcagcacgtt
      541 cgtgcgcttg cgcctcgtcc tcagtggtca acacaccatt gagcaccggc acgcccatct
      601 caagcgccac acgcgacatg gatgcggcac tctcgttgct gacaatttca aagtgatagg
      661 tttcaccgcg gatcaccgca ccaagtgcga tcaaggcatc gaactcaccg gtttctgcca
      721 tctgtgccag tgtgatgcct agctcgagcg cgcccggcac tgacaccacc atgatgtcgc
      781 gttgatcaac gcctaacgct tcaagttcgc ctaagcaagc ctcgagctgg atgaatccga
      841 tttcttcgtt aaaccgagcc cgcacaatac caatgtgcag accttcgcca tttaagtcgg
      901 gggagattgt ataggggctc atggcgtttc ctgtggatga attcggtcgg tgggagcctc
      961 atcgtaacct gtaacggtta acccaaagcc agccatcatg ctcggcatct tgcgcggcct
     1021 ggcaagcagt cgcatgcgca ccacaccgag gtctctcaat atctgggcac cgagcccgta
     1081 cgtgcgtaag tccatgcctt tagaccaccg acccgcctgt tcattggcgt catcaggctg
     1141 gcctaacagc gctgcctgat taagcaccag ctcggcattg gtgtcagcat ttagcaacac
     1201 caccacggcg tcaggcgctt gggccacgac tttcatggcc tcatcaaagc cccacgagtg
     1261 tcccgatcct tgcgcattta gcagatcaat caccgtggtt ggctcatgca cccgcacaag
     1321 cacctcacgg tcttggccga cctcgccttt agacaaagca atgtgcgggc gtccttgcac
     1381 cgtgtcgcgg taaaccgtca tacaaaacgg tccccacggt gtggtgatgt ctttgcgcac
     1441 cacgcgctcg accaccgact cgtgctcgct gcggtactga atcaagtcag caatcgtgcc
     1501 gatcttgagt tgatgcgtct gacaatattc aattaagtcc ggcaggcgcg ccatggtgcc
     1561 gtctggcttt aggatctcgc agatcacggc agctggcgtg agccccgcaa gcgcggttag
     1621 atcacaaccg gcctcggtat gaccggcacg caccaacacg ccgccaggca ctgctcgtag
     1681 cggaaaaata tgcccgggct gcaccagatc gtccggctcg gcgtctttgg ccacagcggt
     1741 gcggatcgtg tgcgctcggt cggccactga aataccagta tgcacacctt cggccgcttc
     1801 aatcgaaacc gtgaaattgg tgccgtaagc cgcgccattg ctg
//
LOCUS       DATBNL010000211         1990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_181750, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000211 DATBNL010000000
VERSION     DATBNL010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181750"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..>1990
                     /gene="tkt"
                     /locus_tag="VIC30_03500"
     CDS             104..>1990
                     /gene="tkt"
                     /locus_tag="VIC30_03500"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018026795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY7803483.1"
                     /translation="MSESAVSVSQMANAIRALSMDAVQKAKSGHPGAPMGMAEIATCL
                     FTQHLRHNPADPAWMNRDRFVLSNGHGSMLIYSLLHLCGYDLPMQEIENFRQLHSKTP
                     GHPEVGVTPGIETTTGPLGQGLSNAVGMALAEALLAAEFNRPGHDIIDHRTYAFVGDG
                     CLMEGISHEVCSLAGTWRLGKLIVVYDDNGISIDGKVENWFTDDTARRFEAYGWNVVR
                     DVDGHDPVAVDAALEQAAALGQTQQRPTLVMCKTVIGQGAPNMAGTDKVHGAPLGDAE
                     IEQTREALGWPHAPFEVPADIKQSWDCSARGQALQADWQARWQGYEQAYPEQAQSLVR
                     RMAGDLPADFADMVTELMSQTVTAAKTLASRKASQQVIEALAPQLPEMLGGSADLTGS
                     NFTDWAGVEPVRATDTGLGFGRHINYGVREFGMAAIMNGVALHGGYLPFGGTFLTFSD
                     YSRNALRMAALMKQRVVHVFTHDSIGLGEDGPTHQSVEHAASLRLIPNLSVWRPCDTV
                     ETAAAWCAALGRPASIGMDVRNGGPTALLLSRQNLPFVERDEQVLANVSRGGYVLSDA
                     SDFKAIIIATGSEVSLALAAQEALSQEGIAVRVVSMPSTDVFDGQDATYRAQVLPSGI
                     ARVAV"
BASE COUNT          397 a          539 c          587 g          467 t
ORIGIN      
        1 ttaaacttcg gggtttccct gatctatcga ttcgagttgt aaagaatgaa ccgaaatcgg
       61 tatgactaac gcacttcact tacgatcttc accgtcacct gtcatgtctg aatccgctgt
      121 ctctgtctcg caaatggcca atgcaatccg ggccttgtct atggacgccg tccaaaaagc
      181 caagtcaggt caccctggtg ccccgatggg catggcagag attgcaacct gcctgtttac
      241 acaacacttg cgacacaatc cggcggatcc tgcctggatg aatcgcgacc gcttcgtgct
      301 gtccaacggc catgggtcga tgttgatcta cagcttgttg catctgtgtg gttatgactt
      361 gccaatgcag gaaatcgaaa atttccgaca gttgcactct aaaacaccgg gacatcctga
      421 agtgggtgtc acgccgggca ttgagaccac aaccggtccg cttggccagg gactgtcaaa
      481 tgccgtgggt atggctttgg ccgaagcact gttggctgct gaatttaacc gtcctgggca
      541 tgacatcatc gatcaccgaa cctatgcgtt tgtcggtgat ggttgtttga tggaaggcat
      601 ttcgcacgag gtttgttcgc tggccggtac gtggcgcttg ggcaaactga ttgtggtcta
      661 tgacgacaac ggcatttcga ttgatggcaa ggttgagaac tggttcaccg acgacaccgc
      721 cagacgcttt gaagcctatg gttggaacgt ggtgcgcgac gtcgacggcc atgaccctgt
      781 tgcagttgac gctgcgcttg agcaggccgc agccctgggg cagacgcaac agcgccccac
      841 gcttgtgatg tgcaagaccg tcattggcca gggtgcgccc aacatggctg gcaccgacaa
      901 agttcacggc gcaccacttg gtgatgcaga aatcgaacaa acccgcgagg cacttggctg
      961 gccccatgca ccctttgagg tgccagcaga tatcaagcag tcctgggatt gcagtgcccg
     1021 tggtcaagcg ttgcaagcag actggcaggc gcgctggcag ggctatgagc aggcttatcc
     1081 agagcaggct cagtcccttg tacgtcgtat ggccggtgat ctaccggctg attttgccga
     1141 tatggtaacg gagttgatgt cacaaaccgt gaccgcggcc aagacgctgg cctcgcgcaa
     1201 agcgtcgcag caagtcatcg aagcgctggc accccagctg cctgagatgc tgggcgggtc
     1261 agctgatctc acaggttcaa acttcaccga ttgggcggga gtagagcccg tgcgcgccac
     1321 cgatacaggc cttgggtttg gccgtcacat caactacggt gtgcgcgaat tcggtatggc
     1381 cgccatcatg aacggcgtgg cgttgcacgg tggttatctt ccctttggcg gcacgtttct
     1441 gacgttctct gattactcgc gcaatgcctt gcgcatggca gcactcatga agcaacgtgt
     1501 ggtgcatgta ttcacgcacg actccattgg tttgggtgag gatggcccca cacatcaatc
     1561 ggttgagcat gcggcaagcc tgcgtttgat ccctaatttg tctgtgtggc gcccatgtga
     1621 cacggttgaa accgcggccg cctggtgtgc agcccttggc cgtcctgcca gcattggtat
     1681 ggacgtgcgc aatggagggc caaccgcttt gttgctgtct cgccagaact tgccgtttgt
     1741 cgagcgcgat gagcaagtgc ttgccaacgt tagccgtggt ggttacgtcc tgtctgatgc
     1801 cagcgacttt aaggcgatta ttatcgccac tggctctgag gtgagtttgg cattggcggc
     1861 tcaagaagca ttgtcccaag agggcattgc ggttcgtgtg gtctccatgc cgagtaccga
     1921 cgtctttgat ggtcaggatg cgacctatcg ggcacaagtc ttgccgtcgg gtatcgctcg
     1981 cgtagccgtc
//
LOCUS       DATBNL010000212         2243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_2303, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000212 DATBNL010000000
VERSION     DATBNL010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2303"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..1209
                     /locus_tag="VIC30_03505"
     CDS             19..1209
                     /locus_tag="VIC30_03505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803484.1"
                     /translation="MDLSFNDQELAFREQVRDFTQKNLPADIRDKQMHHRRLAKDDYI
                     RWHRILAEHGWGAPNWPKEYGGTGWDAVQRLLFEIETFKAGAPRLLSFGLTMIGPVLM
                     KFGNQQQKDYYLPRIITVEDWWCQGYSEPGSGSDLASLKTRAERVGDKYVINGQKTWT
                     TLGHHADWMFCLCRTDPDVKAQRGISMILIDMRQPGVTVRPIKTLDGGAEVNEVWLEN
                     VEAPLENLVGQENEGWTYAKYLLGHERTGIAGIGHCHRELNILKHMVNEAMASGQSLS
                     LDSRFMDEVNKIETQVLALEMLLLRVAADSSAGPGPQASILKIRGSELQQELARLQME
                     VAGPDAWPYDPAWMRAENAFHGPGGEFDLGAAATYFDNRKTTIYGGTNEIQKSIIVKH
                     IIGV"
     gene            1260..>2243
                     /locus_tag="VIC30_03510"
     CDS             1260..>2243
                     /locus_tag="VIC30_03510"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803485.1"
                     /translation="MDFALSEEQRMLTDSLERVMAQQWGFSERRARFASGKLDRAAWQ
                     QLSDLGVSGLLVPEACGGFGESPASMLVVHQTLGTGIVSEPVISSAVMAITMLSAIED
                     QPVAAQWLEAHAQGQAVLAVAWQEAGERYSTEPLSTQLLADGDGFVLTGRKRYVWHGA
                     GSDAMIVSARLDGQMALVLVPTQAAGLTSEDYPTFDLARCADITFDNVRLDRSALLIQ
                     GEQARDVFAKGFDFAVTALCAHACGAMHYLIDVTTNYLKTRKQFGQPLISFQVLQHRL
                     AQMLIEQEMALSSTYVAAAALSDRDAAVRGKRVSMVKTEVANAARQVGEEAV"
BASE COUNT          491 a          590 c          687 g          475 t
ORIGIN      
        1 gtaaaggaga acgtcaccat ggacctgagc tttaatgacc aagagctcgc gtttcgcgag
       61 caggtacggg atttcacgca aaagaatctg ccagccgata ttcgcgacaa gcaaatgcac
      121 catcgtcgct tggccaaaga cgactacatt cgctggcacc ggatcttggc cgaacatggc
      181 tggggtgcgc cgaattggcc aaaggaatac ggcggcacgg gttgggatgc ggtgcaacga
      241 ctgttgttcg agattgagac gttcaaggcg ggcgccccgc gtctgctgtc gtttggtctg
      301 accatgattg gcccggtgct gatgaagttt ggtaatcagc aacaaaagga ctactacttg
      361 ccgcgcatca tcaccgttga agattggtgg tgccagggct actcagagcc tggttctggt
      421 tctgatctag cctcacttaa aacccgggct gagcgcgtgg gcgataagta cgtgatcaat
      481 ggacaaaaga cctggaccac gttgggtcac cacgccgatt ggatgttttg tctgtgccgc
      541 accgacccgg acgtcaaagc gcaacgtggc atctccatga tcctaatcga catgcgtcag
      601 cctggcgtga cagttcgtcc gattaaaacg ctggatggtg gggcagaagt caatgaggtc
      661 tggcttgaga atgtcgaggc accgcttgag aacctggtcg gccaagaaaa cgaaggctgg
      721 acctacgcca agtatttgct cggccatgag cgtaccggca ttgccggcat tggtcattgc
      781 caccgcgaac tgaacattct caaacacatg gtcaatgagg ccatggccag cggtcagtcg
      841 ctgagcctgg attcgcgttt catggatgaa gtcaataaga ttgagacgca ggtgctggcg
      901 ctagaaatgc tgctgttgcg cgtagccgct gacagttctg caggcccggg cccacaagca
      961 tcgatcctca aaatccgggg gtccgagttg cagcaagagc ttgcgcgcct gcagatggag
     1021 gtcgcaggtc ctgatgcttg gccctatgac ccggcgtgga tgcgtgctga gaacgcgttt
     1081 cacggcccag gcggtgagtt cgatttaggg gctgcggcca cctatttcga caaccgtaaa
     1141 acgaccatct atggcggcac caacgagatc cagaaaagca tcatcgtcaa gcacatcatt
     1201 ggcgtgtaag tgcctttgca gacgaggcaa tgctcaagaa tcactaaaca ggaacgaaca
     1261 tggactttgc attatctgaa gaacagcgca tgctcaccga cagcctagag cgcgtcatgg
     1321 cacagcagtg ggggttcagt gagcgccgcg cgcggtttgc ttcaggcaag ctcgatcgcg
     1381 ctgcctggca acaactttct gatctaggcg tctcgggctt gctggtgcct gaggcctgcg
     1441 gtgggttcgg tgagtcgcca gccagcatgc tggtggtgca tcagacccta ggcaccggca
     1501 ttgtcagtga gccggtgatt tccagtgcgg taatggcaat cacgatgctc tcggccatcg
     1561 aagatcaacc agtggccgcg cagtggttag aagcccatgc acaaggccag gccgtgctgg
     1621 ccgtggcctg gcaagaggcc ggcgagcgct acagcacaga gccactgtca acacagttgt
     1681 tggccgacgg cgacgggttc gtgctcacgg gtcgaaagcg ctacgtctgg catggtgcag
     1741 ggtctgacgc catgatcgtg tctgccaggc ttgatgggca gatggctctg gtgttggtac
     1801 caacgcaggc cgcggggcta acctctgaag attacccgac gtttgatctg gcgcgctgcg
     1861 ccgatatcac gttcgacaat gttcggctcg atcgttccgc gctcttgatt caaggtgagc
     1921 aagcgcgtga cgtgtttgcc aaagggtttg attttgcggt gacggctttg tgtgcgcacg
     1981 cttgtggcgc catgcattac ctcattgatg tcacgaccaa ctatctaaag acacgcaaac
     2041 agtttggaca gcccttgatc agtttccagg tgttgcagca ccgcttggca caaatgttga
     2101 tcgagcagga aatggcgctt tcaagcacct atgtggccgc cgcagcgttg tctgatcgcg
     2161 atgctgccgt gcgcggtaaa cgcgtctcga tggtaaaaac cgaggtggcc aatgcagcac
     2221 gccaagtggg tgaagaggcc gtg
//
LOCUS       DATBNL010000213         1602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_141912, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000213 DATBNL010000000
VERSION     DATBNL010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141912"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1351
                     /locus_tag="VIC30_03515"
     CDS             <1..1351
                     /locus_tag="VIC30_03515"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803486.1"
                     /translation="QSKGMVCQWQGLEQLWQAIEKQITKGLLPCTPFALLGGIDSLAL
                     SQKLASGYAKRHIPDLGLEPFEAPTPAAGKRKLRIGYLSSDFKDHPVAYLTVGIIENH
                     SRDDFEVIGFSIGKPGDGPLGQRIQSAFDTFVDLSAMTDAQAVQTVRSYGLDIAMDIT
                     GYTDGCRPAILKARVAPVQVNYYGFAGTMGTDFMDYIVGDAVLMPPGSESFYHEKIIY
                     MPECHQPNDDQRPISNAPITRAEHGLPSDAFVYCSFNKPYKILPNVFACWMRILKSVT
                     ASVLWLQSTDDTVITNLKRAAQKAGVDPDRLIFAGRTPTTADHLARYRLADLFLDTYP
                     YTAHTTANDALWAGLPVLGLSGETFAARVSESLLTTLGLPDLVMRSLPEYEARAIELG
                     LAPAPLTEYRERLEQGKATSALYKPKQLATWLEQGLKTALERHHHQQLPTHIEVTRS"
     gene            1348..>1602
                     /locus_tag="VIC30_03520"
     CDS             1348..>1602
                     /locus_tag="VIC30_03520"
                     /inference="COORDINATES: protein motif:HMM:NF015666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEY7803487.1"
                     /translation="MSTEDNVAAGIADNVAVIGLGYVGLTLATVMADAGFNVIGVEKR
                     QELVELTNAGKPHFTEPGLADAMQRAISAGALAASQTIDQS"
BASE COUNT          369 a          477 c          416 g          340 t
ORIGIN      
        1 tcagtccaag ggcatggtgt gtcagtggca aggtctggaa cagctttggc aggcaattga
       61 gaaacaaatc acaaaaggcc tcctgccctg cacgcctttt gcgttgctcg gtggtattga
      121 tagtctggcg cttagccaaa aactcgccag tggttacgcc aaacgccata tccccgacct
      181 tgggcttgag ccatttgaag caccgacgcc ggccgccggt aaacgcaagt tgcgcatcgg
      241 ctacttgtcg agtgatttca aggaccaccc ggtcgcctat ctcaccgtgg gcatcataga
      301 aaaccatagc cgtgacgatt ttgaggtgat cggcttttct attggcaaac cgggcgacgg
      361 gccgcttggc caacgtatcc agtcagcgtt cgatacgttt gtggacttgt cagccatgac
      421 cgatgcccag gccgtacaaa ccgtcaggtc atacggctta gacatcgcga tggatatcac
      481 gggctacacc gatggttgtc gtccggccat cctcaaggca cgcgtggcac ccgttcaggt
      541 caactattat ggttttgccg gtacgatggg cactgacttc atggactaca tcgtgggcga
      601 tgccgtattg atgccgcctg gtagcgaatc cttctaccac gagaagatca tttacatgcc
      661 cgagtgtcat cagcccaatg atgaccagcg accaatcagc aatgcaccga tcacgcgcgc
      721 cgaacacggc ttaccgtctg acgcatttgt gtactgcagc tttaataagc cctacaaaat
      781 cttacccaac gtgttcgcct gctggatgcg catcctcaaa tctgtgaccg ctagcgtact
      841 gtggctgcaa tcaacagacg acaccgtcat cacaaacctc aagcgcgccg ctcaaaaggc
      901 tggtgtggat cccgatcgac tgatctttgc tgggcgcacg cccaccacgg ctgatcactt
      961 ggctaggtat cgactcgccg atctgtttct tgacacctat ccctacaccg cccataccac
     1021 ggccaatgat gcgctttggg cgggtctgcc cgtgctgggg ttgtcaggcg agacgtttgc
     1081 agccagagtc tctgaaagcc tactcacgac actcggattg cccgacttgg tgatgcgttc
     1141 actgcccgaa tacgaagcac gtgccatcga gcttggtttg gcaccagcgc cattaaccga
     1201 ataccgagag cgtctggaac aaggcaaagc aaccagcgcg ctttacaaac ctaaacagct
     1261 ggcaacatgg ctcgagcaag gccttaaaac cgcccttgaa cgccaccacc atcagcaact
     1321 acccacccac attgaagtta cccgctcatg agtacggaag acaacgtcgc cgctggcatt
     1381 gcagataacg ttgccgttat cggcctgggt tatgtcgggc tgactctagc cacggtcatg
     1441 gccgatgctg gctttaacgt cattggtgta gaaaaacgtc aagagctcgt ggagctcacc
     1501 aacgccggca aaccccattt caccgaacct gggctggcag acgcgatgca gcgcgccatt
     1561 agcgcgggtg cactggccgc gagtcaaacg atcgaccagt ca
//
LOCUS       DATBNL010000214         5431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_22315, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000214 DATBNL010000000
VERSION     DATBNL010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5431
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22315"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1588
                     /locus_tag="VIC30_03525"
     CDS             <1..1588
                     /locus_tag="VIC30_03525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803488.1"
                     /translation="KRTDITKMEARLKVNLLLIPNKHLDTPHHIIERLRHDDPRLEET
                     KASFEMLEEPTSVDMSAATRGDKEIKAKPEALVKGVTPAQPAPPPAVKAPAPETTVAT
                     KTESSGLWGQIVSFFGGIFSEPAKANTQTTETTETKPAQSRSSNRRGGTNNRNRRSSR
                     PDNRRQDRQDGDPKAQDTKPDAQVAAQASDEQQADAAPTKSRRSRRGRGRSKQSTGEA
                     MATAELNQMQTEQAEQLPGAEVQVQEADANQPLVEQTGAAQTDEQAGADKPRRRSRRG
                     RRGKRSTDVNATPGNEDLQNATADGESSETAETAETAAHARTAQTTDPSPATTAEPNV
                     EPVQAAEPQQPSAATPTPMVAEPAAQSSEQAVTTTPAPVTASEPPATPQPVVTKPEPV
                     VAAEPTPEPASVATSPASAQTGNGADHDDHNDHNDHNDHNDHNDHNERQDTPAQPSAV
                     TVSHSDEIRVNASVADKATLNAIVSSVGLQWIESDPARVQVVQTEVAAQAPVKLGREP
                     KVMAPPAAAQLTQVETRTEG"
     gene            complement(1696..2577)
                     /gene="accD"
                     /locus_tag="VIC30_03530"
     CDS             complement(1696..2577)
                     /gene="accD"
                     /locus_tag="VIC30_03530"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HEY7803489.1"
                     /translation="MSWLDKILPPRINKNADSAAKRVPEGLWVKCPSCESVLYNEDLA
                     ASLQVCPKCDHHMRINARARIDALLDIEGRREIGQTTRSMDPLKFRDSKKYTDRVQGA
                     VKQTGETEALVTVSGAIHGVPCVLSCFEFEFLGGSMGAVVGERFVRGVHAAIEQHTPF
                     ICVAASGGARMQESLFSLLQMAKTNAALTQLSKHRLPFISVLTDPTMGGVSASFAFVG
                     DVVIAEPKALIGFAGPRVIEQTVREKLPEGFQRSEFLLEKGAIDMVVDRRQLREELAR
                     LMGLFMDQNVDIPLKTA"
     gene            complement(2601..3446)
                     /gene="trpA"
                     /locus_tag="VIC30_03535"
     CDS             complement(2601..3446)
                     /gene="trpA"
                     /locus_tag="VIC30_03535"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEY7803490.1"
                     /translation="MSIKKITKAFERSASEHRAALIPYIAASNPLPASTVPLMHQLVA
                     AGADVIELGVPFSDPMADGPIIQRAAEHAIAQGVGLKDVLKMVAEFRESDQDTPIVLM
                     GYANPIERMGQEAFAEQAAAAGVDGVLVVDYPPEEAAPFVELLDRYDMAPIFLLAPTS
                     TNERVAAVGRLAKGYVYYVSLRGVTGAGHLDTDDVAIQLAKIRQHVTIPVGVGFGIGD
                     ADTASRVAEVADAVVIGSKLIDVMNKAWQPLPVEQQTQAAISAGHDWLKHIREALEKV
                     TKQAA"
     gene            complement(3460..4659)
                     /gene="trpB"
                     /locus_tag="VIC30_03540"
     CDS             complement(3460..4659)
                     /gene="trpB"
                     /locus_tag="VIC30_03540"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEY7803491.1"
                     /translation="MKPYDFPDATGHFGPYGGVFVAETLMHALAELRDAYAKYQNDPE
                     FLAEFHSELKHFVGRPTPVYHARRWSEELGGAQIWFKREDLNHTGAHKINNSLGQALL
                     ARRMGKQRIIAETGAGQHGVATATVCARYGMECIVYMGSEDVKRQSPNVYRMKLLGAT
                     VVPVESGSKTLKDALNEALRDWVTNVEDTFYIIGTVAGPHPYPMMVRNFHSVIGEECI
                     EQMPEMVGRQPDYVVACVGGGSNAMGIFHPYINHENVHLVGVEAAGHGIASGQHAASL
                     SAGQVGVLHGNRTYVIQNEDGQVQETHSVSAGLDYPGVGPEHAWLKDTGRATYVGCTD
                     EDALAAFHHCCRVEGIIPALETAHALAEAARLAPTLPKDKVILVNLSGRGDKDINTVA
                     TQSGIEL"
     gene            complement(4811..>5431)
                     /locus_tag="VIC30_03545"
     CDS             complement(4811..>5431)
                     /locus_tag="VIC30_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEY7803492.1"
                     /translation="QLAQQLGFAHADDLYVAVAKEDFSLRHIDAVFKPTTPDADEQSV
                     ARFGWLASKDTDSAKGGSGVLVQGVGSLLTQLARCCRPAPPDPIGGFVTRGRGVSIHR
                     LDCPSFVQLARRDPERIIEVSWGDTGDTVYPVDIVVHAHDRDGLLRDLSEVFARLRLN
                     VIGVNTQSKASLAHMVFTVQVSGADVLQRALVALAEVSGVLSAQRR"
BASE COUNT         1357 a         1659 c         1381 g         1034 t
ORIGIN      
        1 gaagcgcact gacatcacca agatggaagc tcgcctcaaa gtcaatttgc tgttgatccc
       61 gaacaagcat cttgacacgc cgcaccacat catcgaacga cttcgccatg acgacccgcg
      121 ccttgaggaa accaaggcga gtttcgaaat gctcgaagag cctacatcgg tagacatgag
      181 cgccgccacc cgtggcgaca aggagatcaa ggccaaaccc gaggcgctcg tcaaaggcgt
      241 cacaccggct cagcctgccc caccaccagc ggttaaagcc cccgcgccag aaacaacagt
      301 cgctaccaag acagaatctt ctggtctttg gggtcagatt gtcagcttct ttggtggaat
      361 ctttagcgag ccagctaaag caaacactca gaccacggag acgacggaga ccaagccagc
      421 gcaaagccgt tcatcgaacc gccgaggcgg cacaaacaat cgcaaccgtc gctcatcgcg
      481 gccagacaac cgtcgtcaag accgtcaaga cggcgaccct aaagctcaag acaccaaacc
      541 agatgcccaa gtggctgcgc aagccagcga tgagcaacaa gcagatgcag cacccactaa
      601 gtcacgtcgc tcacggcgtg gtcgcggtcg cagcaagcaa agtactggcg aagcaatggc
      661 aactgccgag ctcaaccaaa tgcaaaccga gcaagcagag caacttcctg gcgcagaggt
      721 tcaagtgcaa gaagccgatg cgaaccagcc tttggttgaa caaaccggtg cagcccagac
      781 cgatgagcaa gccggtgccg acaagccgcg tcgccgcagt cgccgcggcc gtcgtggtaa
      841 gcgctcaacc gatgtgaacg caacgccagg taacgaggat ctacaaaacg caacggctga
      901 tggcgagtca agtgaaaccg cggaaactgc tgaaactgct gcacacgcac ggactgctca
      961 aaccactgac ccatcgcctg caacaacggc agagccaaac gtagaacctg tgcaggcggc
     1021 cgagcctcag cagccaagcg cagcaacacc aacacccatg gttgctgagc ctgctgcaca
     1081 gagctctgaa caggctgtaa caacaacgcc tgcaccagtc acggcctcgg agcccccagc
     1141 aacaccgcag ccggttgtaa ctaaacccga accagtggtg gcagcagagc ccacgccgga
     1201 accggcatcg gtggcaacat caccggctag cgctcagacc ggtaatggtg ctgaccacga
     1261 tgaccacaac gaccacaacg accacaacga ccacaacgac cacaacgacc acaatgaacg
     1321 ccaggacacc ccggcacagc cttcagccgt gactgttagc cacagtgatg agatccgcgt
     1381 taacgcctcc gtggccgaca aagcgacact gaatgcgatt gtcagcagcg tcggtctgca
     1441 atggatagag agcgatccgg cgcgcgtgca ggtcgttcaa actgaagttg cggctcaggc
     1501 gccagtcaaa ctagggcgcg agcctaaagt gatggcgccg ccggctgctg ctcagttgac
     1561 ccaggtcgag acaaggactg agggataaga acaaagccac aaaaaacccg gcgcttcatg
     1621 cgtcgggttt tttgtagtcc gatttcccta taagctaacg cgaatctcgc gtttagcccg
     1681 taccgtcgta gccacctaag ctgtcttaag aggaatatcg acgttttgat ccatgaagag
     1741 ccccatcaag cgtgctaact cttcgcgtag ctggcgtcga tcgaccacca tatcgatagc
     1801 acctttctca agcaaaaact cagagcgctg aaaaccttca ggcaacttct cgcgcacggt
     1861 ttgttcaatc acgcgcggac ctgcaaaacc gatcaatgct ttgggctctg cgatgaccac
     1921 gtcgccaacg aacgcaaagc tcgctgatac accacccata gtgggatcag tcaatacgct
     1981 gatgaaaggc agtctatgct tggacagttg agtcaatgcg gcattggttt tggccatttg
     2041 cagtaaagaa aacaaactct cctgcatgcg ggcgccaccc gaggcagcca cacagataaa
     2101 aggcgtgtgc tgttctatgg ccgcgtgcac gccgcgcacg aagcgctcgc caacgacggc
     2161 ccccatggag ccacctaaaa actcgaactc gaaacacgat aatacgcacg gcaccccatg
     2221 gatggctcca cttaccgtga ccaacgcttc ggtttcaccg gtttgtttga cggcgccttg
     2281 cacacgatcc gtgtattttt ttgagtcacg aaacttcagc ggatccatcg agcgagtcgt
     2341 ctgcccaatc tcgcgacgac cctcaatgtc gagtaaggcg tcaatacgtg cgcgagcatt
     2401 aattctcatg tgatgatcac attttggaca aacctgtagg ctcgcagcta agtcctcgtt
     2461 gtacagaacc gactcacatg atgggcattt gacccataga ccttcaggta cccgcttggc
     2521 cgcgctatcg gcgtttttat tgatgcgcgg cggcaggatc ttatctaacc aactcatgtc
     2581 gatgtctatc cagagaccgc ttatgcagcc tgtttggtta ctttttctag ggcttcacga
     2641 atgtgcttaa gccaatcgtg gccagcactg atagcggcct gtgtctgctg ctcaaccggc
     2701 agtggttgcc aagccttgtt cattacatca atgagcttgc taccgatgac cacggcatcg
     2761 gcgacttcag ccacccggct tgccgtatcg gcatcaccaa taccgaaacc cacaccgacg
     2821 gggatcgtca cgtgctggcg aattttggcg agctgaatag caacatcgtc ggtatccaag
     2881 tgtcctgcac cggtcacacc acgcaaagag acgtaataca cgtaaccctt ggccaagcgg
     2941 ccaaccgcgg caactcgttc attggtagac gttggcgcta ataaaaagat aggcgccatg
     3001 tcgtaacggt cgagcaactc aacaaaaggc gcggcctctt caggcggata atccacaacc
     3061 aacacaccat cgacgccggc ggccgcggct tgctcggcaa atgcttcttg gcccatgcgt
     3121 tcaattggat tagcgtaccc catcaataca atcggtgtgt cctggtcgga ttcacgaaac
     3181 tcggccacca tcttcaacac atcctttagc ccaacacctt gggcgatcgc atgctctgca
     3241 gcacgctgga tgatgggacc atcggccatg ggatcagaaa acggcacacc gagctcaatc
     3301 acatcggcac ctgcggccac gagctggtgc attagaggca ccgtggaagc tggaagcggg
     3361 ttgctcgcgg caatatacgg aatcaacgcc gcgcggtgct cgctagcact gcgctcaaac
     3421 gctttggtaa tttttttgat actcaccttg tgccgatcct cacagttcga tgccagactg
     3481 agtggccacg gtattaatgt ccttatcgcc acgacctgac aagttaacca aaatcacctt
     3541 gtctttcggc aatgttggcg caagtctggc cgcctcagcc aaggcgtgag ccgtctcaag
     3601 ggcaggaatg atgccttcga cacggcagca atggtgaaac gccgctaaag cgtcctcatc
     3661 ggtgcagcca acgtaagtgg cacgccccgt gtctttgagc catgcatgct caggaccaac
     3721 gcctgggtag tccagaccgg ccgagaccga atgggtctct tgaacctgcc cgtcctcgtt
     3781 ttgaatgacg tacgtgcgat tgccatgcag cacacccacc tgaccggcag acaaagaggc
     3841 cgcatgctga ccagatgcaa tgccatgtcc ggccgcttca acgcccacga gatggacatt
     3901 ctcatgattg atgtacgggt ggaagatacc catggcattg gagccgcccc caacacacgc
     3961 caccacatag tccggctgac gaccaaccat ttcaggcatt tgctcgatac actcttcacc
     4021 aatgactgag tggaagttgc gaaccatcat ggggtaagga tggggacctg ccacagtacc
     4081 aatgatgtag aacgtgtcct cgacgttggt aacccaatca cgcaatgctt catttaaagc
     4141 atctttgagg gttttagagc cagattcaac tggcacgact gtggcgccga gcaacttcat
     4201 gcgatacacg ttgggcgatt ggcgtttgac gtcttcgctg cccatgtaca cgatgcattc
     4261 catgccgtag cgtgcacaga ctgttgccgt ggccacgcca tgttgaccgg cacctgtctc
     4321 agcgatgatg cgctgtttgc ccatgcggcg agccagcagt gcttggccca agctgttgtt
     4381 gatcttgtgt gcaccggtgt ggttcaagtc ttcacgcttg aaccagatct gggcaccacc
     4441 gagctcttct gaccagcgcc gtgcatggta gaccggcgtt ggccgaccca caaaatgctt
     4501 tagctcactg tgaaactccg ctaaaaactc agggtcattc tggtatttgg cgtaagcatc
     4561 acgaagttcc gcaagcgcat gcattagcgt ttcagcaaca aacaccccgc cgtacggccc
     4621 aaagtgtccc gtagcatccg gaaaatcata tggtttcaca gcctatgccc ccaaaaagtc
     4681 accacgcgct taaatgaaac aatattcagc ggtgttcgtt cattaaacgc agattttacc
     4741 agtccgggcg gtgtgccggg ggattctcct actcgcgaca taccgcagcc tagccccaag
     4801 accaacctgc tcagcgtcgc tgtgcagaga gcacgccgga aacctcggcc agagcgacca
     4861 atgcgcgctg caatacgtcc gcgccactga cttgcacagt aaacaccatg tgcgcaagtg
     4921 aggccttact ttgggtgttc acgccgataa cgttcaaccg caaacgggca aatacctctg
     4981 acaaatcgcg cagcaaccca tcacggtcgt gggcgtgcac cacaatatca actggataca
     5041 ccgtgtcgcc cgtatcgccc catgacacct cgataatccg ctcggggtca cgacgcgcaa
     5101 gctgcacaaa gctcgggcag tccaagcgat gtatcgacac ccctctgccc cgagtcacaa
     5161 accccccaat cgggtccggc ggcgcaggcc ggcagcatct tgcgagctga gtcaacaaag
     5221 aaccaacgcc ttgcaccagc accccactgc cacctttggc gctgtcagtg tctttggatg
     5281 ccagccaacc aaaacgcgcc accgactgct catcagcatc tggcgtggtt ggcttaaaga
     5341 ccgcatcaat gtgacgtaag ctgaaatctt ctttggccac tgccacataa agatcatcgg
     5401 catgggcaaa cccaagttgc tgtgccaact g
//
LOCUS       DATBNL010000215         1842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_62231, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000215 DATBNL010000000
VERSION     DATBNL010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62231"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1334
                     /locus_tag="VIC30_03550"
     CDS             <1..1334
                     /locus_tag="VIC30_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY7803493.1"
                     /translation="FGMAGMAIAIVTTGALVISLAGTEGAVMGLGWVLLGLVIGGTVG
                     TIMAKRVEMTKMPELVAFMHSMIGLSAVAIAVAIVAEPQAFGIVDAIGAIPLGNRLEL
                     FIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVAFNGQHMLNLALAILMIGCGIWF
                     MLTQSWTPFIIMTIIAFILGVLIIIPIGGADMPVVVSMLNSYSGWAAAGIGFSLNNSM
                     LIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGDSDGAEAAGGGGDRNVRSGSA
                     DDAAFLMSNAESVVIVPGYGLAVARAQHALKELAEKLTEAGVTVKYAIHPVAGRMPGH
                     MNVLLAEAEVPYDQVFEMDDINGEFGQTDVVLVLGANDVVNPAAKNDPKSPIAGMPIL
                     EAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAVD"
     gene            complement(1394..>1842)
                     /locus_tag="VIC30_03555"
     CDS             complement(1394..>1842)
                     /locus_tag="VIC30_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008164344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HEY7803494.1"
                     /translation="LRLDPAYAAKAKLVSDSVKDIAEYIAPEASRLKELVDAKRLPAR
                     PAFHPPCTLQHWQGLRPESEALLRDIGLDLQPFAETHLCCGSAGAYSVLQPEIATKLR
                     DRKLGHLDQAKPDVIVSSNIGCIGHLQSGTDTPVRHWVEVVDEALR"
BASE COUNT          391 a          472 c          520 g          459 t
ORIGIN      
        1 tattcggtat ggcaggcatg gccattgcca ttgttaccac cggggcattg gttattagcc
       61 tggctggcac tgaaggtgca gtcatgggtc tgggctgggt cttgctgggt ctggtcatcg
      121 gcggcacggt tggcaccatc atggccaaac gcgtcgaaat gacaaaaatg ccggaactcg
      181 tggccttcat gcacagcatg attggtctgt cagctgtggc catcgccgtg gcaattgtgg
      241 cagaaccaca agcattcggc attgtcgatg caatcggtgc catcccactt ggcaaccgac
      301 ttgagctatt tatcggcaca tttgtcggcg ccattacctt ctcaggctca gtcattgcat
      361 tcggcaagct ctcaggtaag tacaagttcc gcctctttca aggtgcgcca gtggccttta
      421 acggccagca catgctcaac ctagcattgg cgatcctcat gattggctgc ggtatctggt
      481 tcatgctgac ccagtcttgg acgcccttta tcatcatgac catcatcgcg tttatcttgg
      541 gggtgttgat catcatcccc attggcggtg ctgatatgcc agtggtggtg tccatgctca
      601 acagttattc tggctgggct gcagctggta tcggcttctc gttaaacaac tcgatgctga
      661 tcattgccgg ttccttggtt ggctcatctg gcgccatttt gtcctacatc atgtgtaaag
      721 cgatgaaccg atcttttttc aatgtgattc ttggcgggtt cggcggtgac agtgacggtg
      781 cagaagctgc tggtggtggt ggcgaccgta atgtgcgctc aggcagtgcc gatgatgcgg
      841 cattcttgat gtccaacgcc gaatccgtgg tgattgtgcc tggttacggc ttagccgtgg
      901 cgcgtgcgca gcatgcctta aaagagctcg cagaaaaact caccgaggca ggtgtgaccg
      961 ttaaatacgc cattcatccg gtggccggtc gcatgccggg acacatgaat gtgctgttag
     1021 cagaggctga ggtgccctac gaccaagtgt ttgagatgga cgacataaac ggcgagtttg
     1081 gtcaaaccga tgtggtgctc gtgcttggcg ccaacgatgt ggtaaatccg gccgctaaaa
     1141 acgaccccaa gtcgcccatt gctggcatgc ctattctgga ggcctacaaa gccaaaacag
     1201 tgattgtgaa caaacgttca atggcagccg gttacgcggg ccttgataac gaactgttct
     1261 acatggataa aaccatgatg gtgtttggtg atgccaagaa agtcatcgag gacatggtca
     1321 aggctgttga ttagtcaccg agattaatca cctggactgt tccttactgc gctagcttct
     1381 tttcctgaag aggctagcgc agtgcctcat ctaccacttc aacccagtgc cgaaccggcg
     1441 tgtccgttcc tgactgcagg tggccgatac aaccaatgtt ggatgacaca atcacatcag
     1501 gcttggcttg atcaaggtga cctagcttgc gatcgcgtaa tttggtggcg atttcaggct
     1561 gcaagaccga gtaagcacca gctgagccgc aacacagatg cgtttcagca aagggttgta
     1621 agtccaatcc aatgtcacgc aacaacgctt cgctttccgg gcgcagtcct tgccaatgct
     1681 gcaaggtgca cggcggatgg aatgcgggcc tagcaggcaa gcgcttggcg tcaacgagct
     1741 ctttcaggcg gctagcctcg ggggcaatgt actcggcgat atccttgaca ctgtcgctca
     1801 ccaatttggc tttggccgca taggcgggat cgaggcgcaa tt
//
LOCUS       DATBNL010000216         1500 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_181800, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000216 DATBNL010000000
VERSION     DATBNL010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181800"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VIC30_03560"
     CDS             <1..440
                     /locus_tag="VIC30_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEY7803495.1"
                     /translation="MVNLTLIKRRDMPATVPVYEPEIAETIRLILEESTGPEGAKLAQ
                     VQGYRVAGKSGTARKWVNGAYSQKLYRSSFAGFGPVSDPRIVVALSVDEPSGKHYYGG
                     RVAAPVFAEIMGRALRMLGAEPDAPVESEVVAASSGTSIEGAR"
     gene            437..>1500
                     /locus_tag="VIC30_03565"
     CDS             437..>1500
                     /locus_tag="VIC30_03565"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008765 -
                     UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEY7803496.1"
                     /translation="MTNLIPQTQTLLDALRLTAPSGALCLDSRQVRSGDVFLACPGRD
                     SDGRDFIGEAVRQGASAVVFEGDLSDAQRHQLGDVPGWSMSQLREQLGALASAWWGNP
                     SSSLTVIAITGTNGKTTTAQWLAAALQNEAVPCGVIGTLGVTGADGKRHEGLLTTPDV
                     VSIHRYLAKLRDQGATHVVMEASSIGLDQQRLAAVDIDVGVFTNLTQDHLDYHGDMTA
                     YAQAKALLFKRPELKGAVINLDDHYAAQMIQNSVAPVLTYGINNASATLLAGAIKQGQ
                     ATQQFSLQHESQSIEIKTPFVGAHTVANMLAVAGVLRVLGWSLTKVAAALQQLPAVAG
                     RLEPVEPLVSSASVPAVLVD"
BASE COUNT          308 a          373 c          472 g          347 t
ORIGIN      
        1 acatggtgaa tttgacgctt atcaagcgtc gcgatatgcc agccacggtg ccggtttatg
       61 agcccgagat cgcagaaacc attcgtctca tacttgaaga atccaccggc cctgaaggtg
      121 caaaactggc gcaggtgcag gggtatcgcg tggcgggcaa gagtggtacc gcacgcaagt
      181 gggtcaatgg cgcgtacagc cagaagctat atcgcagttc ttttgcggga tttgggccag
      241 tctcagaccc gcggattgtg gtggccttga gcgtcgatga gcccagtggt aagcactatt
      301 acggcgggcg tgtggccgcg cctgtgtttg cagaaattat ggggcgtgct ttacgaatgt
      361 tgggtgcgga acccgatgca ccggttgaat ccgaagtggt cgctgctagt agcggcacat
      421 cgatcgaggg cgcacgatga cgaatctgat accccagact cagacgctac ttgatgcctt
      481 gcggttaact gcaccctctg gtgctttgtg tcttgattcg cggcaggtcc gatcgggtga
      541 tgtctttctg gcatgtcccg gacgcgatag cgacggccgg gactttatcg gcgaggcggt
      601 caggcaaggt gctagcgcgg tggtgtttga gggagatttg tccgatgccc agcgtcacca
      661 gcttggtgac gtgcccggct ggtctatgag tcagttgcgt gagcaactcg gtgcgctggc
      721 atcagcttgg tggggcaacc cgtcgtcatc attaacagtg atcgcgatta ctggaaccaa
      781 cggtaagacc accacggcac agtggctagc agctgcgttg caaaacgagg ctgtgccttg
      841 tggtgtgatt ggcacgctcg gggtgactgg ggcggatggc aagcgccatg agggcttgtt
      901 aaccacaccg gatgtggtga gcattcatcg ttacttggct aagctgcgcg accaaggtgc
      961 cacgcacgta gtaatggaag catcctcgat tggtcttgat caacaaagac tcgccgccgt
     1021 ggatattgac gttggtgttt tcacgaattt gactcaagat catctggact accacgggga
     1081 tatgacggcg tacgctcagg ccaaggcgct gctctttaag cgtccggagc tcaagggcgc
     1141 ggtgattaat ctcgatgatc attacgccgc acaaatgatt cagaactcgg tggccccggt
     1201 gctgacgtat ggcatcaata acgcatcagc taccttgctt gctggtgcta tcaaacaagg
     1261 tcaagcaaca cagcagttca gtttgcagca tgagagtcaa agcatcgaga taaaaacccc
     1321 ttttgttggt gcgcacacgg ttgccaacat gttggcggta gcgggtgttt tacgtgtgct
     1381 gggatggtcg ctgaccaagg ttgcagccgc tttgcagcaa ttgcccgctg tcgccggtcg
     1441 gctcgagccg gtggaaccat tggtgtcaag cgcgtctgta cctgccgtgc tggtggatta
//
LOCUS       DATBNL010000217         1787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_112128, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000217 DATBNL010000000
VERSION     DATBNL010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112128"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(273..1358)
                     /locus_tag="VIC30_03570"
     CDS             complement(273..1358)
                     /locus_tag="VIC30_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015014368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY7803497.1"
                     /translation="MQIDLHSLCPDAMSKAIGMLDEEWIYDDPVISPVIPVVLGRGVG
                     QDWHKAGTFRHHLIGVTRTLTLWQQPDELRLLGLLHSVYGNAHVDLMKFDPKSERGRL
                     AELVGDDVERLIYTFCTISRVEFVRELFAGNVADDGSVTLKAGEKPMVLPARDVAIFA
                     VMTMADICEQWYSWQDDIYSGYPDYEFLPGKVHWAAGLWPGPMRPTTYRVSQMSKLGQ
                     VLQHPAIKGILPEPPVFNQCTATLDRDDEAAASALYWSVVQQNQPLVSPDATRATLKQ
                     AIALNPWVAEPYLLLAQLHLTFDEFDEAHAAAASGVQLVSIWGNTWDKRIGWDAWMAW
                     GRILLQSAQKGTWPKDINKINNLALDM"
BASE COUNT          475 a          498 c          434 g          380 t
ORIGIN      
        1 gaatcatctc gcccaacatg gcgtgattcc aacgagttga agtatcctat tagccttcga
       61 tggctagggc tgtgctcgct ctaacaatcg gttctttcac agtaaccctg cgggttcagc
      121 aaggggaatg cgcgggcaat gtgttcatgc tgaaaccgct acgcaattgc agccggcatt
      181 tgagctcgcc gttgatgact acctagcaga ctgcgatgaa acagcaataa ctgcagagaa
      241 accaatcctc aacgactaaa agcctagtgc cctcacatat ccaacgcgag attattgatc
      301 ttgttgatat ctttgggcca agtgcctttt tgtgccgatt gcaacaagat tcgcccccac
      361 gccatccagg catcccagcc gatgcgcttg tcccaagtgt tgccccagat tgataccagt
      421 tgcacaccgc tcgctgcagc cgcgtgtgcc tcgtcaaact cgtcgaaggt caggtgcagt
      481 tgcgcaagca acaggtaggg ttctgccacc caagggttta atgcaatcgc ttgcttcaat
      541 gtggcgcgtg tggcgtccgg tgaaaccaac ggttggtttt gttggaccac agaccagtaa
      601 agcgcactgg ctgccgcctc atcgtcgcga tcaagtgtcg ctgtgcattg attaaacacc
      661 ggtggctcgg gcaagatgcc tttaatcgct gggtgctgca atacttgacc cagcttggac
      721 atttgactga cgcggtacgt ggttggtcgc atgggacctg gccacaggcc tgcagcccaa
      781 tgcaccttac cgggcaggaa ttcataatcc gggtaaccgg aatagatatc atcctgccag
      841 ctataccact gctcacagat gtcagccatg gtcatgaccg caaatatcgc cacatctctg
      901 gctggcagta ccatgggctt ctcaccagcc ttaagcgtca cactaccgtc atcggccacg
      961 ttacctgcaa acaactcgcg cacaaactca acccgggaaa tcgtacagaa cgtgtagatc
     1021 agtcgctcga catcgtcacc caccagctct gcgagtcgac cacgttcaga cttgggatcg
     1081 aatttcatga gatcgacatg ggcgttgcca tagacgctgt gcaaaagccc gagcagccgt
     1141 aactcatcgg gttgctgcca caaggttagc gtgcgtgtga ccccaatcaa gtggtgacga
     1201 aacgtcccag ctttgtgcca gtcttgaccc accccgcgac caagcaccac gggaataacc
     1261 ggtgaaataa ccgggtcgtc gtaaatccat tcctcatcga gcatgccaat ggctttgctc
     1321 atggcatcag gacaaaggga gtgaagatct atttgcatgg ggagtatcca tcattagcat
     1381 ggcgcgcggt gagtgtgcgg tgagtgtgcg gtgagtgcgt caaggtaagt gttgccgaac
     1441 aaaccacaca atacccaaat accgaagcac tgcactaaag cactacacca aagcactgaa
     1501 acactaaagc accaaaagaa caaaacaatg aaaccaagcg tagttaagtt gaacacttca
     1561 cgcaagtcag atattgcagt cagacatggc accagtcatc gcatcagcca ttgcgccagt
     1621 tatcaacctg acaaaaaccc cccatcagag acctaactgt tgcgtcagat gaaacaccgt
     1681 gcgaaacacc atgtctggcg cacaccatga ggcccgcgca tagactaccc taaaaactgt
     1741 cagacaatat tcagaagtta aaagctcaaa agttaaaggt caaaggt
//
LOCUS       DATBNL010000218         3558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_82472, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000218 DATBNL010000000
VERSION     DATBNL010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3558
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82472"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VIC30_03575"
     CDS             complement(<1..699)
                     /locus_tag="VIC30_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HEY7803498.1"
                     /translation="MHLHILGIGGTFMGSLALIARAAGHRVTGCDEAVYPPMSTQLAE
                     QGIEFIDGYGADQLALKPDLFIIGNVVSRGNPLMEGILNEGVPYTSGPQWLGEHILTG
                     QHVFAVAGTHGKTTTSSMLAWILQCAGCEPNFLIGGIAPGLGLSARYKPTSPWFVIEA
                     DEYDTAFFDKRSKFVHYHARTAILNNLEYDHADIFADLAAIETQFHHLLRTVPGNGQV
                     IVTAGEPALERVLAR"
     gene            774..1337
                     /locus_tag="VIC30_03580"
     CDS             774..1337
                     /locus_tag="VIC30_03580"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY7803499.1"
                     /translation="MKRRTLIIGGLGLAGMVVVGWLGWRESSRKAPQANQAMRTPVAI
                     EPDPTAFYAARLPNLQGIEQPMTQWQGKPLVVNFWATWCPPCVKEIPDLNRLAAKHTQ
                     AVFLGVAVDTADNVREFIKTVPIDYDSLIAGHQGIDLVRALGNAAGGLPFTVLLKPNG
                     EVQEIITGMVDATSLDRSIERLLASSA"
     gene            1549..1989
                     /gene="aroQ"
                     /locus_tag="VIC30_03585"
     CDS             1549..1989
                     /gene="aroQ"
                     /locus_tag="VIC30_03585"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEY7803500.1"
                     /translation="MQKNILVLHGPNLNLLGMREPEIYGRTTLAQIDQGLQSLAIESG
                     AQLSSLQSNHEGVLVDRIQAAMSDGTTHIIINAGAYTHTSVAIRDALSALTQPVIEVH
                     LSNVYRREPFRHHSYLSDIAQAVIAGLGAEGYRAAVRSILQQSD"
     gene            2069..2527
                     /gene="accB"
                     /locus_tag="VIC30_03590"
     CDS             2069..2527
                     /gene="accB"
                     /locus_tag="VIC30_03590"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017777082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEY7803501.1"
                     /translation="MDLRKLKTLIDLVGESDIAELEITEGDDKVRIVKATPAPAMMAA
                     PMTYAAAPVAGQPGAAPSGVAPEPVAPAPVEGELVKAPMVGTFYRSPSPGASPFVEVG
                     QTVKEGEPLCIIEAMKLLNEIEADKSGVVKEILVENGEPVEYGQPLFVIA"
     gene            2530..>3558
                     /locus_tag="VIC30_03595"
     CDS             2530..>3558
                     /locus_tag="VIC30_03595"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY7803502.1"
                     /translation="MFEKILIANRGEIALRIQRACRELGVKTVVVHSEADRDAKYVRL
                     ADESVCIGPAASKDSYLSMPAIIAAAEVTDAEAIHPGYGFLSENADFADRVEKSGFVF
                     IGPRPDSIRLMGDKVSAKQSMIEAGVPVVPGSEGALPDDPEEIVRVARQVGYPVIIKA
                     AGGGGGRGMRVVHTEAALINAVTTTKTEAGSAFNNPEVYLEKFLENPRHVEIQVLADG
                     GKHAVWLGERDCSMQRRHQKVIEEAPAPGISRRLIEKIGERCAEACRKMGYRGAGTFE
                     FLYENEEFYFIEMNTRIQVEHPVTELITGVDLVQQQIRIAAGEPFTLRQRDIEFKGHA
                     IECRINAED"
BASE COUNT          810 a          934 c         1005 g          809 t
ORIGIN      
        1 tcgtgcgagc acgcgctcga gtgcgggctc gccggcggtg acaataactt gcccattgcc
       61 tggcacggtg cgcagcagat ggtgaaactg tgtctcgata gccgcgagat cggcaaagat
      121 atcggcgtga tcgtattcca ggttgtttaa gatcgccgtg cgggcatggt aatgcacaaa
      181 cttcgatcgc ttatcaaaaa atgcagtgtc gtattcatcg gcctcaatca caaaccatgg
      241 gctcgtgggc ttgtagcgag ccgataggcc aaggcctggg gcaatgccgc caatcaagaa
      301 gttcggttcg caccccgcac actgcaagat ccacgcgagc atcgagctag tggtggtttt
      361 gccgtgcgtg cctgccacgg caaatacatg ctgcccggtc agaatatgtt caccaagcca
      421 ttgcggccct gatgtgtatg gtacaccttc attcaaaatg ccctccatca gtgggttgcc
      481 gcggctaacc acattgccaa taatgaacaa gtcaggcttt aacgccagct ggtctgcccc
      541 atacccatcg atgaattcga tgccttgttc ggcaagctgt gtgctcatgg gcggatacac
      601 cgcttcatcg caaccggtga cgcgatggcc agcggcgcgc gcaatcaaag ccaaagagcc
      661 catgaaggtg ccgccaatgc ccagaatgtg taaatgcata ttgattgctc tccctgcggc
      721 attgtagaag gttgagccgc ttaagtcgct tctcgcgcgc tatgatggcg aacatgaaac
      781 gacgcacatt gatcattggc ggtttaggat tggctggcat ggtagttgtg ggctggttgg
      841 gatggcgtga aagctcgcgc aaagcaccgc aggccaacca ggccatgcgc acgccggttg
      901 ccattgagcc tgaccccacg gcgttttacg cggctcgctt gccgaacctg caaggtatcg
      961 agcaacccat gacgcaatgg cagggcaaac ccttggtggt taatttctgg gccacgtggt
     1021 gtccgccctg cgttaaagaa atcccggacc ttaatcgtct ggctgccaag catacgcagg
     1081 cggtgtttct aggtgttgcc gttgatacag ccgataatgt gcgcgagttc atcaaaaccg
     1141 tgccaatcga ttatgattca ctcatcgcgg ggcatcaggg tatcgatctg gtacgtgcac
     1201 taggtaacgc cgcgggtggt ttgccattta cggtcctact gaagcccaac ggcgaggttc
     1261 aggaaatcat caccggcatg gtcgatgcaa cctcactcga tcgctcgatt gaacgcttgt
     1321 tggcaagttc agcgtaataa gtataaaatt aaccacagtt aggctaaaaa taacgccata
     1381 tgttgtaact gacggtgcgt aatcggtggt gtgttgtatt tgttttgatg cgcgccgacg
     1441 gtggtcataa cctcagcaag taaggcgtta tttaaaccaa gactgatccg ctgggttcga
     1501 agttttacgc tttaaccgac ctgaattgat taacgcagtc gcgcgctcat gcaaaagaac
     1561 atactggtat tgcacggccc caacctcaac ctgcttggca tgcgtgagcc cgagatatac
     1621 ggtcgcacca cgctggccca gattgatcag ggtctgcaat cacttgccat cgagtctggt
     1681 gcgcagttat cgagtctaca aagtaaccac gagggtgtcc tcgttgaccg catccaagcc
     1741 gcgatgtccg atggcaccac ccacatcatt atcaatgctg gcgcctacac gcacaccagt
     1801 gttgcgatac gtgatgcatt gtctgccttg acgcaaccgg ttatcgaagt tcatttatcc
     1861 aacgtttatc gtcgcgagcc atttcggcat cactcctacc tttcagatat cgcgcaagcg
     1921 gtcattgctg ggttgggtgc tgagggctat cgcgctgcgg ttcggtcgat tttgcagcag
     1981 tcagattgac agcccaagcc gagcttgggc tgtcattatt ttttaaccat ccgtacgatt
     2041 cggaaaactg tatcggaaaa cgcacattat ggatctcaga aaacttaaaa cgttgatcga
     2101 tctcgtcggc gagtctgaca tcgccgagct cgaaatcacc gaaggggatg ataaggttcg
     2161 catcgtcaaa gccacgccgg ccccggcgat gatggccgca cccatgacgt acgcagcagc
     2221 gcccgtcgcg ggtcagccag gcgcagcacc aagtggtgtt gcacctgagc cggtcgcacc
     2281 agcgcctgtt gaaggcgagc tggtcaaggc acccatggtt ggtacgtttt atcgctcgcc
     2341 aagcccaggt gcgtcgccct tcgttgaggt agggcagacg gtcaaagaag gcgagcccct
     2401 ttgcatcatt gaagccatga agctgctcaa tgagatcgaa gcggacaagt ccggggtggt
     2461 caaggagatt ctcgttgaaa acggcgagcc tgtggagtac ggtcagccct tgtttgtgat
     2521 tgcctgatta tgtttgaaaa aattctcatc gccaatcgtg gcgaaatcgc cttgcgcatc
     2581 cagcgcgctt gtcgcgagct gggtgttaaa accgtggtcg tacactccga ggctgatcgt
     2641 gatgccaaat atgtgcgact cgcagacgag tcagtgtgta ttgggcctgc ggcatccaaa
     2701 gacagttact tgagtatgcc agccatcatt gcggcagccg aagtcaccga tgccgaggcg
     2761 attcatccgg gctatgggtt tttgtcggag aacgctgact ttgcagaccg tgtagaaaaa
     2821 agcggttttg tgtttattgg tccacggcct gattccatcc gtctcatggg tgataaggtc
     2881 agcgccaagc agtccatgat tgaggccggc gtacccgtgg tgcccggctc tgaaggcgca
     2941 ttacctgacg atcctgaaga gatcgtgcgg gtcgcgcgcc aagtgggcta tcccgtgatt
     3001 atcaaggccg ctggcggcgg cggtgggcgc ggcatgcggg tggtgcatac agaagcggcg
     3061 ctgatcaatg cggtgaccac caccaaaaca gaagctggat cggcgttcaa taatcctgag
     3121 gtctatcttg agaagtttct tgagaacccg cgtcacgtcg agattcaggt gctcgcagac
     3181 ggtggcaagc acgccgtttg gttaggtgag cgtgattgct ccatgcagcg acgtcatcaa
     3241 aaagtgattg aagaggcacc ggcaccgggc atctcccgtc gcctaataga aaaaatcggt
     3301 gaacgctgcg ccgaagcctg ccgcaaaatg ggctatcgcg gtgctggtac gttcgagttc
     3361 ctctatgaga atgaagagtt ttactttatt gagatgaaca ctcggatcca ggtagagcac
     3421 cctgtcacgg agttgatcac cggtgtcgat ttggtacagc aacaaattcg aattgccgcc
     3481 ggcgaaccct ttacgctcag acagcgtgac attgagttca aaggccatgc catcgagtgc
     3541 cgtatcaacg ccgaagat
//
LOCUS       DATBNL010000219         2045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_62301, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000219 DATBNL010000000
VERSION     DATBNL010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62301"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1079)
                     /locus_tag="VIC30_03600"
     CDS             complement(<1..1079)
                     /locus_tag="VIC30_03600"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803503.1"
                     /translation="MRLTSPALAPILGLGQICSWGTLYYSFPLIALQMEAELGWSKSE
                     LYAGATLGLAMTALLSYPVGAGIDRGFGKWLMGGASLAALGVMGWWSVTDHLLAFYVI
                     CALSGAIQAAVLYEPAFAVLARHVGPPNARRGITHITLWGGFASTVFIPITELLISTL
                     DWRTTLLWLGAVNFVFGLVYLWVIQPQHDVGHAHTPAQKQADATRDRLIVRENLNNSL
                     FWLVLGSLTVYAGMFSAFTFHMYPMLQEQGLNERDVVLAIAIIGPAQVLGRYLVALYA
                     PAMSMRLLGSVVVAVFPIAFALLISAQPGFWLVALVFAAYGMANGIFTIVRSLVVPEM
                     LSPHAYGALNGIITIAATVARAAAP"
     gene            complement(1131..>2045)
                     /locus_tag="VIC30_03605"
     CDS             complement(1131..>2045)
                     /locus_tag="VIC30_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HEY7803504.1"
                     /translation="LLDNLANAVGIGEPEKWFGCQSIEDWQYIDRVLEVDQTPIGKTP
                     RSCPATYIGFWDDIRKQFADTQEARMRGWKTNRFSFNTGDGRCPVCEGQGMRTVEMSF
                     LPDVKVPCDACHGDRFNADTLSARLRGKHVGEVLSMEVDEAVEFFAAHPKVAHPLKLM
                     QDVGLGYLTLGQPSPTLSGGEAQRIKLVTELAKAKVTDGVIKTGRASRLPHTLYVLDE
                     PTVGLSMADVEKLIHVLHRLTDAGNTVVVIEHNLDVIAEADWVVDLGPEGGSQGGRLV
                     AQGSPDVLIRKHLKQSHTAQALKPLLKH"
BASE COUNT          495 a          570 c          550 g          430 t
ORIGIN      
        1 aatggggctg ctgcgcgagc gactgtggcg gcaatggtga tgatgccgtt aagcgcacca
       61 taagcgtgtg gactgagcat ttcagggacg accagacttc gaacgatggt aaaaatccca
      121 ttggccatgc cgtaagccgc aaacaccagc gcaaccagcc agaagccggg ttgggcacta
      181 attagcaacg caaatgcgat cggaaacact gcgaccacta ctgagcctaa cagccgcatc
      241 gacatggctg gtgcgtagag tgccaccaga taacgcccga gcacttgcgc cggaccgatg
      301 atggcgatgg ccaacaccac atccctttca ttaagccctt gttcttgcag catcggatac
      361 atgtgaaacg taaatgcaga gaacatgccg gcatacacgg tcaaggaccc cagcaccaac
      421 cagaacagac tgttgtttag gttctcgcgc acgatcagtc gatcccgtgt tgcatcggct
      481 tgtttttgtg caggcgtgtg ggcgtgaccc acatcatgct gaggttggat gacccacaaa
      541 tacaccaggc cgaacacaaa attcactgca cccagccaca gcagcgtggt acgccaatcc
      601 agcgttgaga tgagcaactc ggtgattggg ataaataccg tgctggcaaa tccaccccaa
      661 agcgtgatgt gggtaatacc gcgccgtgca ttcggcggcc caacgtgtcg tgcaagtact
      721 gcgaacgctg gctcatagag cactgcagcc tgtatggcgc cactgagcgc acagatgaca
      781 taaaacgcca ataaatgatc cgtgacagac caccagccca tcacaccgag tgcggcgagc
      841 gaggccccac ccatgagcca cttaccaaac ccccgatcaa tgcccgcacc gaccgggtag
      901 ctcaagagcg ctgtcatcgc cagccctagc gtggcaccgg cgtagagttc agacttgctc
      961 cagcctagct ctgcttccat ttgtaaggca atcaatggaa agctgtagta gagcgtgccc
     1021 caggagcaga tctgacctaa accgagaatg ggcgcaagcg ccggtgacgt taaacgcatc
     1081 aagtggtggt gtaactggtg tcagtgcaaa aggtgtctag atgggcgatg ttaatgctta
     1141 agcagcggtt ttaaagcctg tgccgtgtgc gattgtttta gatgcttacg gattaacaca
     1201 tcgggcgagc cttgggcaac caatcggcca ccttgactgc caccctcggg cccgagatcg
     1261 accacccagt ccgcttcagc gatgacatcg aggttgtgtt cgatgactac cactgtattg
     1321 ccagcgtcgg ttaagcgatg cagaacatgg attaacttct ctacatcggc catggaaagt
     1381 cctacagtcg gctcatcgag cacgtaaagc gtgtgcggca accgtgaggc acgtccggtt
     1441 ttaatgacgc catcggtgac tttcgctttg gctaactccg tcactagctt gatgcgttgc
     1501 gcctcgccgc cagacagcgt cggtgagggc tggccaagcg tcaagtagcc gaggccgacg
     1561 tcttgcatta gtttaagcgg gtgcgccacc tttgggtgag ccgcaaaaaa ctcaacagcc
     1621 tcatcgactt ccatggatag cacctcaccg acatgcttgc ctcgcagacg tgcacttaat
     1681 gtatcggcat taaagcggtc accatggcag gcatcacaag gtactttgac gtcaggtaag
     1741 aaactcattt ccacggttcg catgccttgc ccttcgcaga ccgggcaacg gccgtcaccg
     1801 gtgttaaagg agaagcgatt ggttttccag ccacgcatac gagcttcttg tgtgtcggca
     1861 aattgtttgc gaatgtcgtc ccagaaaccg atgtaggttg ccgggcatga acgtggtgtt
     1921 ttaccgattg gtgtctgatc gacttcgagc acacgatcga tgtattgcca gtcctctata
     1981 gactgacagc caaaccattt ttctggttct ccgatgccaa cggcattggc tagattgtcc
     2041 agcaa
//
LOCUS       DATBNL010000220         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_162078, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000220 DATBNL010000000
VERSION     DATBNL010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162078"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VIC30_03610"
     CDS             <1..375
                     /locus_tag="VIC30_03610"
                     /EC_number="4.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase"
                     /protein_id="HEY7803505.1"
                     /translation="EVASDTLVGTLDYGPIRVATGTMGFKYEPLDTAAEQKKLVETPN
                     YLLKIIPHVDGTPRICELVRFHLQDVTVKGAWTGPAKLELFQHALAPVADLPVLEIVG
                     AKHLVCDLTLGLGEVAHDYLKD"
     gene            505..>1504
                     /locus_tag="VIC30_03615"
     CDS             505..>1504
                     /locus_tag="VIC30_03615"
                     /inference="COORDINATES: protein motif:HMM:NF024215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family membrane protein"
                     /protein_id="HEY7803506.1"
                     /translation="MATRRLSIAEKFLYGYPLLSAIRKAIGILIALVCLHYLFGNLQL
                     AIFGAFGALCLSMMDLPGSPRQTTFAFLIGSGLAIVSASLTALTAPYPYAVTTVLTLL
                     TFFFSMLVVYGRRGAMTSIACLLLSLVVMYAAGLNLATSELIMAVASGLVVYMTINIG
                     LAFMMQRWEQAQCLSMALYATAKYLSLRARMLDPTASLDASARAAVGAQGVMAELHQS
                     ARDMIFTDHNLGENQPSPRHQELARVLYHTVSLHDMLLGSYEDYKLLRQSLGKHEILT
                     LSASILSTLAEQIDWIALAVANNKPARQHSNVTQKLTALELAITQFEDDQAATANPD"
BASE COUNT          347 a          432 c          367 g          358 t
ORIGIN      
        1 gaggttgcct cagacacctt ggttggcacg ctagactatg gtcccatccg tgtggccaca
       61 ggcaccatgg gctttaaata tgaaccgctc gatacggccg ctgagcagaa aaaactggta
      121 gagacgccca actacctgct taagatcatc ccgcatgtgg atggcacacc gcgcatctgc
      181 gagctcgttc gctttcattt gcaagatgtc acagtcaaag gcgcatggac aggtccggcc
      241 aaacttgaac tctttcagca tgcgttggcg cccgtggctg acctgcccgt actggaaatc
      301 gtcggtgcca agcacttggt gtgcgacttg acccttggct tgggcgaagt ggctcacgac
      361 tacctgaaag actgatcgaa atagaaccag tcgactatta ttcggcatgc acgacacagc
      421 gggtaacaca cacaatgtgt tacccgctgt ttttgtacct agcaacagtc aactaacgcc
      481 cactcattgt ttgaccaaca caccatggcc accagacgcc tgtcaatcgc ggaaaagttc
      541 ctatacggct atccgttact gagcgccatc agaaaagcca ttggcatcct gattgcattg
      601 gtgtgtttgc actacctgtt tggcaactta caactcgcca tttttggggc gtttggggcg
      661 ctctgcctat caatgatgga tctgcccgga tcgccgcgcc agacaacatt tgcttttctg
      721 atcggttcgg gcttggccat cgtatcggct tcacttaccg ccctgacagc cccatatccc
      781 tatgcagtga ccaccgtatt gacactgtta accttctttt tttcgatgct tgttgtctat
      841 ggcagacgtg gtgccatgac aagtattgcc tgcctactct tgagtctggt ggtgatgtac
      901 gctgcaggcc ttaacctcgc gaccagcgag ttgataatgg ctgtagcgtc cgggcttgtc
      961 gtatacatga ccatcaacat cggcctagct ttcatgatgc agcgctggga acaggctcag
     1021 tgcctgtcaa tggcactgta cgccaccgct aaatacttgt cgcttcgtgc gcgcatgctt
     1081 gatccaacag ccagcctaga tgcttctgcg cgtgccgctg tcggggccca aggggtcatg
     1141 gccgagctgc atcaatccgc acgcgacatg atttttactg atcacaatct gggtgaaaat
     1201 cagccgtcac cgcgccacca ggaattagcc cgtgtgctgt atcacaccgt tagcttgcac
     1261 gacatgctgc tgggatctta tgaggattac aaactgctac gccagagctt aggtaaacat
     1321 gagattctga ccttgtcggc gagcattcta tcgacgctag ccgaacaaat cgattggatt
     1381 gccttggccg ttgccaacaa caaaccggca cgccagcaca gcaacgtcac acaaaaactc
     1441 accgcactcg aacttgccat cacccaattt gaggatgacc aagccgccac agcaaaccca
     1501 gata
//
LOCUS       DATBNL010000221         1996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_112212, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000221 DATBNL010000000
VERSION     DATBNL010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112212"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1188
                     /gene="rpoN"
                     /locus_tag="VIC30_03620"
     CDS             <1..1188
                     /gene="rpoN"
                     /locus_tag="VIC30_03620"
                     /inference="COORDINATES: protein motif:HMM:NF009118.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEY7803507.1"
                     /translation="SERYSGSRQSRDDDQQERPESSSLPTLREHLLAQLGTTRASERD
                     SALVGLLIDDLNDDGFLESSLQSIHDMLDPELAVEIDELSAALSLLQSFDPPGIGARD
                     LAECLNLQLKHPDLACIPALNDPQIQAIAQQICTEHLGVLAAGNLLKLQDTLGCEAST
                     LQQAHACILRLNPRPGSAWARPAAEYAIPDVIVRKTPQGYKPFLNESALPKLNVNAIY
                     AQALGSARSGEHSALHGQLQEARWLIRNVNQRYETILRVSDFIVSHQQAFFEGGWGCL
                     RPLTLREVAAELGMHESTISRATNQKFMLTPIGTVELKRFFGAGLSAGNGETTSTMAV
                     QTRIRDLIQSEDLGKPLSDGQLATMLEKEGIQVARRTVAKYRELMRIPSASLRKSHAQ
                     ARR"
     gene            complement(1195..1827)
                     /locus_tag="VIC30_03625"
     CDS             complement(1195..1827)
                     /locus_tag="VIC30_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803508.1"
                     /translation="MSWRWLFVFVILMLAASAAAGVALGNWLVDAAPSISADGRTNIT
                     RAPEVIRDAAGRPLAAVPPQPLLDGSLGAPLEKVQPMWEVQAVSLFETNLDPMVVLGR
                     GDDSYTVSDMLSQAGSGLIQGEGDVATVDLTAQVEPEPNQIDQVAQAAAAAPVPTGWQ
                     DQLANAIDACQNVGFFSRPDCIKRARQKFCEPNNAWGNHPLCPRQNDVFN"
BASE COUNT          484 a          570 c          522 g          420 t
ORIGIN      
        1 agtgaacgct acagtggttc aaggcaaagc cgcgacgacg accagcaaga gcggcccgag
       61 tccagcagtc tgcctacctt gcgcgagcat ctgcttgccc aacttggcac cacccgggcc
      121 agtgagcgag atagcgcgct ggtgggttta ctgatcgatg atctaaatga cgatggcttt
      181 cttgagtcct cgttgcaaag catccatgac atgcttgacc ccgaacttgc tgtagagata
      241 gatgagctat cggctgcgtt aagcctgcta cagtcttttg atccgccggg tatcggcgcg
      301 cgagaccttg ctgaatgctt gaacctacag ctcaaacatc cagacttagc gtgcatcccc
      361 gctttgaatg acccgcagat acaagcgatc gcccaacaga tttgtaccga gcaccttggg
      421 gtattggctg ccggcaattt gttaaagcta caagacacac taggttgtga ggcatcaacg
      481 ctgcagcagg cacacgcctg cattttgcgc ctgaatccga ggcctggcag tgcgtgggct
      541 aggcccgcag ctgaatacgc catcccagat gtgattgtcc gtaaaacacc ccagggctac
      601 aaaccgtttc tcaatgagtc tgccctgccc aagctaaatg tcaatgccat ctacgcccaa
      661 gcgcttggta gcgcccgctc gggtgagcac agcgccttgc acggtcaact gcaagaagca
      721 cgttggttaa tccgcaatgt taatcagcgc tacgaaacca ttttgcgggt gtctgacttt
      781 atcgtgtcac accaacaagc tttttttgaa gggggttggg gttgcttgcg acccttgaca
      841 cttcgtgagg ttgccgcaga gcttggcatg cacgaatcca ccatctcgcg cgcgaccaac
      901 caaaagttca tgctaacccc gataggtacg gtggagttaa aacgcttttt tggggcaggt
      961 ctgtcagcag gcaacggcga aaccacctcg accatggctg ttcaaacacg tattcgtgac
     1021 ttgatacaga gcgaagacct aggcaaaccg ttatcagacg gtcaactagc aaccatgcta
     1081 gaaaaagagg ggatccaggt agctagaagg accgtggcaa agtaccgtga gctcatgcgg
     1141 attcctagcg cttcgctcag gaaatcccat gctcaggcgc gccgataagc gaccttaatt
     1201 aaacacgtcg ttttggcggg gacaaagggg atgatttccc cacgcattat tgggctcaca
     1261 aaacttctgg cgtgcccgct taatacagtc aggccgagaa aaaaacccaa cgttctgaca
     1321 agcatcgatg gcgttggcca attggtcctg ccaaccggtt ggaaccgggg cagctgcggc
     1381 agcttgcgca acttggtcga tctgattagg ctctggttct acctgcgcgg tcaaatcaac
     1441 ggtggcaaca tcgccctcac cttgaatcag acctgagccc gcttgggaca acatatcaga
     1501 gacggtataa gaatcatcgc ctcgcccaag taccaccatc gggtcgagat tggtctcaaa
     1561 caatgagacg gcctgcactt cccacatggg ttgaaccttt tctaggggag cgcctaaaga
     1621 cccatcaagc aagggttgtg gtggcacggc tgccaaaggc cgcccggccg catctcgaat
     1681 cacctctggc gcacgcgtga tgttggtgcg gccatcggcc gaaatcgacg gtgctgcatc
     1741 aaccagccaa ttgcccagcg caacgcctgc cgcggccgaa gccgccagca tcaaaattac
     1801 aaacacgaat aaccagcgcc aggacattct gctcggtttc ctcagccaat cctctagtta
     1861 aataccctcg caccatgctc acgcatggtg tgaaactgca catccgggta gcgctcttgc
     1921 accaccctta actgggcggg cgagcttgct aaatatgccg gtgcatcaat gacatcatag
     1981 gcaatctgat cggcat
//
LOCUS       DATBNL010000222         4587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_22419, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000222 DATBNL010000000
VERSION     DATBNL010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4587
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22419"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..979)
                     /locus_tag="VIC30_03630"
     CDS             complement(53..979)
                     /locus_tag="VIC30_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013954414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803509.1"
                     /translation="MSSAMKAVFIDASDMHAEVTGRLRQTADIEVVVNRNIDITPEEI
                     PAVVGDADIVWIDHTAFPTDIASQCPNLRHVVFMGTGARSYMNPEELAEIGIQVHIIK
                     GYGDTAVAECAFGLMWAAAKEFAYMDRGVRAGGWPRRDGLQLTGKTVGLIGFGGIGAE
                     MARLCLGAGMRVIAWNRSPKTHPGVEFMALDDVLAQSDVISVHLLLNDETLGMIDRHH
                     IQNMRDGVLLLNTARGAVVDEDAMIEALKSGKIGHAGLDVYTTEPMPAGHPLSQLDNV
                     TLSAHSAFRTQQASDNLIEAALNHCRRIIAGG"
     gene            1247..2086
                     /locus_tag="VIC30_03635"
     CDS             1247..2086
                     /locus_tag="VIC30_03635"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEY7803510.1"
                     /translation="MYGITDLTTFVLGTIFIVLLPGPNSVFVLSTASMRGVGAGYRAA
                     AGVFVGDMILMLLAATGAASVLYTNPTLFMVLKYAGAAYLAWIGFGLVRQAWTGWFHP
                     DKLKANATESPIDGSRDIVEAPTSQSMTAATTSLPNQTSPGSGEPNAVAYGTGKSNAG
                     KPNNSRRDISKPDTSKSSTRSPFRGALLISLLNPKAIFFFISFFVQFVDPQYDYPVLT
                     FLLLGLIVQICSLSYLAALIHGGAHLARSMGQHPRLNALGAGTVGGIFIWFGVKLADA
                     SLG"
     gene            2420..3334
                     /locus_tag="VIC30_03640"
     CDS             2420..3334
                     /locus_tag="VIC30_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005799928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEY7803511.1"
                     /translation="MDVKNTPYTAAERAKVAKSSTMVSVWVNIVLSILQIVVGFFAKS
                     QALIADGIHSLSDLLSDFVVLIANHHSQKEADEDHPYGHQRFETAASLFLGGILLSVG
                     VGMIWASVDKIMNPDAIPDVAPVALVIAIITLFAKEGLFRYMLSAAKRVKSSMLVANA
                     WHARSDAASSLVVAIGILGHLMGYKILDPIAALIVGLMIGRMGWQFGSEAFNDLMDRG
                     VDEQELQEILNTLNSTPGVLGVHDVRTRKMGDMVMVDAHIEVDRNLTVEQGHDIAVAA
                     REAVMHRHRVLDLMAHVDPVDPPEVATA"
     gene            3534..>4587
                     /locus_tag="VIC30_03645"
     CDS             3534..>4587
                     /locus_tag="VIC30_03645"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7803512.1"
                     /translation="MGIRPLDGLKVLELGQLIAGPFASKILAEFGADVIKVEPPAGDP
                     LRKWRYIHEDTSVWWAAHARNKRSITIDLRQPEGQELVRMLAKEADVLIENFRPGAME
                     KWGLGYEQLHALNPKLIMLRVSGYGQTGPYKDRPGFGVIGEAMGGLRYLSGEPGRPPV
                     RVGVSIGDTLSGLHGVIGVMMALRHREMQNGTGQEIDVALYESVFNMMESLIPEYSKF
                     EAVRQPSGASMPGIAPTNAYPTSDNKYALIAGNGDSIFKRLMTLIGREDLANDPDLQD
                     NVGRAKNADKLDEAISDWTRQRTLDEVLEKLNEANVPSGRSYDAADIAHDPHYRDRDM
                     ILQTTLPDGSSVEVPGI"
BASE COUNT         1100 a         1195 c         1226 g         1066 t
ORIGIN      
        1 aatttgatcg tagacgaaaa gacctgccaa gaaggaaggt cgccacctga attcaacccc
       61 cggcgatgat ccttctacag tgattcaagg ccgcctcaat caggttgtca ctggcttgct
      121 gcgtacggaa ggccgaatgc gctgacaaag tgacgttgtc taactgcgat agcggatggc
      181 cagctggcat gggttcagtc gtatagacat cgagtccagc gtgcccgatc ttgccggact
      241 ttagagcctc aatcatggcg tcttcatcga ccacggcacc gcgggcggtg ttcagtaaaa
      301 gcacgccgtc acgcatgttc tggatgtgat gacgatcaat catgccgagg gtttcatcgt
      361 taagcaataa gtgcactgag atgacgtcac tttgtgccaa cacgtcatca agcgccatga
      421 actcaacacc cgggtgtgtt ttaggggaac ggttccaggc aatgacgcgc atgccggcac
      481 cgagacacag tctggccatc tcggccccaa tgccaccaaa cccaatcaag ccgacggttt
      541 taccggttag ttgcaaacca tcacggcgtg gccacccccc tgccctgaca cctcggtcca
      601 tgtaggcaaa ctctttggca gcagcccaca tcaacccaaa tgcacactcg gccacggctg
      661 tgtcgccgta gcctttgatg atatgtactt ggatcccgat ttcagccaac tcttcggggt
      721 tcatgtagga cctggcaccg gttcccatga acaccacatg ccgcaggttt ggacactgac
      781 tggcaatgtc agtgggaaac gccgtgtgat ctatccagac aatgtcagcg tcgcccacca
      841 cagcggggat ttcttctggg gtgatatcga tgttgcgatt caccaccacc tcgatgtctg
      901 cggtttgacg caaacgccca gtaacctcgg cgtgcatgtc actggcatcg ataaacacgg
      961 ctttcatggc tgaactcatg gtcacactca aattggttac accagcagca tcatgcttga
     1021 atgggcgcgc ttgcgtcaaa tgcggacgaa gcagacaaag atatagatac ggaacgcaaa
     1081 ggttcagtaa ctactacgac caattccagc attttgccct gcctgcccac aaaatactgc
     1141 atccaactca actggaatta ccaatacaat tcttgatatc aagtcttagc aacaaaacat
     1201 atctatccaa agccacccaa accaagcaac cactggcagc gtaactgtgt acggcatcac
     1261 cgatctcacc acctttgttc tgggcacgat cttcatcgtg ctgctgccag gcccgaactc
     1321 agtctttgtg ctgtcaacag cgagcatgcg tggcgttggg gcgggttacc gggcagctgc
     1381 cggtgtgttt gtcggtgaca tgattctgat gctgttggca gccacgggtg ccgcttccgt
     1441 gctgtatacc aacccgacct tgttcatggt gcttaagtac gctggggctg cgtatctggc
     1501 ctggattgga tttgggctag tcaggcaagc atggacaggc tggtttcacc cagacaaact
     1561 caaagcaaac gctacagagt cacccatcga tggcagtcgt gacattgtcg aggcacccac
     1621 atctcaatca atgactgcgg caacaacaag cttgccaaac caaacgtcac caggcagtgg
     1681 cgagccaaac gccgtcgcat acggtactgg aaaatccaac gccggcaagc caaacaacag
     1741 caggcgcgac atcagcaaac ctgatacctc taaatcttcc acgcgatcac cgtttcgtgg
     1801 tgcgttgttg atcagtctgc tcaatccaaa ggcgattttt ttctttatct cgttttttgt
     1861 gcagttcgtg gatcctcagt atgactatcc agtcctgacg tttttgttgc tagggttaat
     1921 tgtgcaaatc tgcagcctga gctacctggc tgctctcatc cacggtggtg cccatttggc
     1981 taggagcatg ggccagcacc caaggcttaa tgccttgggt gctggcactg tcggtgggat
     2041 ctttatctgg tttggtgtca aactcgctga tgcctcgctc ggttaatttc cctcggttaa
     2101 cgctagctat gattggctat tgttggctgg gaaatggaaa acattgaatg ttgcctttaa
     2161 gtacagcccc aagcgcatcc cgtgcataaa tacgaatggt ttcggctctt attttgccca
     2221 tgactaccac tcccactaac aaaatgcagc ctgaacctgc ctaaatgacg gtttggtcat
     2281 cacttggcca tgaaattgga ttaaaaactc atccatgggt aaagcacatc atcacagaca
     2341 tgcgcagtca catgaagacg cacatgcaca cacgcacaca gacggccatc tagcgtcagg
     2401 tcctgacgcg tcttcagaga tggacgtcaa gaacacaccg tatacagctg ccgaacgcgc
     2461 caaggttgcc aagtcatcga ccatggtcag tgtctgggtc aatatcgttt taagtatttt
     2521 gcagattgtg gtggggttct ttgccaaatc acaggcgttg atcgctgacg gtattcattc
     2581 gctctcagac ttgttgtccg actttgtggt gttgattgcc aaccaccaca gccagaagga
     2641 agccgatgag gatcatccgt acgggcatca gcggtttgag acggcagcgt cgttgttttt
     2701 aggtgggatt ttgttatcag tcggtgtggg catgatctgg gcctcggtcg acaagatcat
     2761 gaacccggac gccatccctg atgttgcacc agtagcacta gtcattgcga tcatcacgct
     2821 gtttgcgaaa gaaggcttgt ttcgctacat gctgtctgcg gctaaacggg tgaaatccag
     2881 catgttggtg gccaatgcct ggcacgctag gtcggatgcc gcgtcgtcac tggtggtggc
     2941 gatcggtatt ttggggcact tgatgggcta caagatactg gatcccatcg ctgcattgat
     3001 tgtgggcctg atgattggtc gcatggggtg gcagtttggc tcggaggcgt ttaatgacct
     3061 catggatcgc ggtgtggacg agcaagagct acaagaaatt ctgaacacgc taaacagcac
     3121 gccgggtgtg cttggtgttc atgatgtgcg tacgcgcaag atgggcgaca tggtgatggt
     3181 agatgctcac atcgaagttg atcgcaacct gaccgtagaa caaggccatg acattgcggt
     3241 ggccgccaga gaggcggtga tgcaccgtca ccgggtgtta gatctgatgg cgcacgtgga
     3301 cccggtggat ccgcctgagg tggctacggc ttgaaacggc cgctcgaatc aaccgcttgc
     3361 agcaggccgc ctcagacata caatcaggga ttatgtttga acattgacct gatctcatgc
     3421 ccactgacaa gacacgcacg aatccggatg atggattgtc cggtaacgta gccaacacca
     3481 agacaactca gccagaatct ctgccaacac cacagcaagt acccgtcaaa gacatcggca
     3541 ttcgacccct cgatggctta aaagtccttg agcttggtca attaatcgct ggaccgtttg
     3601 cctcgaagat cctggcggag tttggcgccg atgttatcaa ggtcgaacca cctgccggtg
     3661 accctttgcg aaagtggcgt tacatccacg aagacacatc cgtgtggtgg gccgcgcatg
     3721 cgcgcaataa gcggtcgatc accatcgatt tacggcaacc tgaaggtcaa gaactggttc
     3781 ggatgctggc taaagaagcg gacgttctaa tagaaaattt ccgtcctggt gccatggaga
     3841 aatgggggtt ggggtatgag cagctgcacg ctcttaaccc gaaactcatc atgctgcgcg
     3901 tgtctggcta tggccagacc ggaccgtata aggacagacc cgggtttggg gtgattggtg
     3961 aggccatggg tggattgcgg tatttgtcgg gtgaaccggg cagaccaccg gtacgggtgg
     4021 gtgtatcgat tggtgacacg ctctctggtc tacatggggt gattggtgtc atgatggcgc
     4081 tacgtcatcg tgaaatgcaa aacggtactg gccaagagat cgatgtggcc ttgtatgaat
     4141 cggttttcaa tatgatggaa agcctgatac ctgagtactc aaagttcgaa gcggtcagac
     4201 aaccgtctgg ggcgtcgatg ccgggcattg cgccgaccaa tgcttatcca acctcagata
     4261 acaaatacgc actcatcgca ggcaatggtg acagtatctt taaacgcttg atgacgttaa
     4321 ttggtcgcga ggatttggcc aatgacccag acctgcaaga caatgtgggt cgggcaaaaa
     4381 acgccgacaa actcgatgag gcgatttctg attggacgcg gcaaagaaca ttggatgagg
     4441 tgcttgagaa actcaatgaa gccaatgtcc cgagcggcag aagctatgat gctgccgata
     4501 tagcccatga cccgcactat cgtgacagag acatgattct tcaaaccacc ctacccgatg
     4561 gctcatcagt cgaggtaccg ggaatcg
//
LOCUS       DATBNL010000223         3545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_72363, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000223 DATBNL010000000
VERSION     DATBNL010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72363"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..1531
                     /gene="pyk"
                     /locus_tag="VIC30_03650"
     CDS             98..1531
                     /gene="pyk"
                     /locus_tag="VIC30_03650"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEY7803513.1"
                     /translation="MKLDAISHRDRNAKILATLGPASSDPEVIRKLFAAGVDVFRFNF
                     SHGSHEDHRARYDAVRAIEKEIGRPVGILLDLQGPKLRLGTIEGGKIEVAQGQQLVLD
                     MDATPGNAKRLPLLHPEIFAAVKAGDHLLIDDGKVRLEVVACDGKSATVRVLNDGVLS
                     DRKGVNVPGAILPLSPLTDKDRKDLAFGLELGVDWVALSFVQRPEDIEELKSIVQGRA
                     WVMAKLEKPAAIDSLDAIVRISDGIMVARGDLGVECLPEDVPVLQKRIIRTCREQGKP
                     VVVATQMLESMITSPVPTRAEVSDVAGAIYDGVDAVMLSAESAAGSYPIEAVSMMNRI
                     LCATESDPLQKNTMQAVQAYRDTTSSDAISAAIRTVADTLPVAATVAYTSSGSSALRV
                     AHERPKTPILSMTPNLTVARRLTLVWGVHSTQALDIQSIDEVADHATAEVTRHGFGEP
                     GRAVLIAAGTPFGVSGTTNVLRIAWLT"
     gene            complement(1539..>3545)
                     /locus_tag="VIC30_03655"
     CDS             complement(1539..>3545)
                     /locus_tag="VIC30_03655"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803514.1"
                     /translation="TSFIDVSQQRRAEAELRDVRHQIERTAYELTENLPVGTYTMVQP
                     PDGGLAQFRFMSTRFLALTGLTREEAYGDPLKGFACVHPDDHDRWLELNAKAFSNRES
                     FWGETRVVVNGQTRWITAESKPRPLDDGSTVWEGVLIDITERKLAEEALARAKARAEQ
                     LERLKSDFLTQMSHEIRTPLTSILGLADLMVDEPLADPQREKVQQIRSAGRLLLGIVN
                     DILDLSKIEAGQLITEEQPFNLQDILSQIDSWQEAWAKPGVALCVEAPTEPVPTLIGD
                     RRRIEQVLGNLVGNAMKFTEAGEVKVSADVSNRGDNTLVLRLAVTDTGCGIAADLLPQ
                     LFNPFVQADSGTARRHGGTGLGLSISKQLVELMGGRLGANSQLGQGSTFWFELPLAFD
                     HHQQVGNTLAAPVSRGERLAGLKILVVDDSASIRDLIQEFLVRESAIVELASNGAQAL
                     TILRQHGASFDCVLMDVQMPIMDGLTATQNIRALRELDKLPVLAMTAGLLAEQQTRAR
                     QAGMADLVAKPVDLDRMVTQIQQVTGRGTEPSKQDSETTNPMPTIAGIDREHLNHTME
                     GNRGLFERLIVVFIDEFDGLDERISQVLSAGLNAETINEAGRLAHSLRGAASQIGAVE
                     LVKAAAALEHALHHDGKHSPAKLAAMGKLLSDLIKSLKKHLNQG"
BASE COUNT          723 a          972 c         1027 g          823 t
ORIGIN      
        1 ttgctcatca ccacgatggt tcaatatgct gtaacttcac gtaaaccgta ttgccgtatc
       61 gcgtggtttt tgtctcacca agattttagg ctaacccatg aaattagacg ccatttcgca
      121 ccgtgaccgc aatgccaaga ttcttgccac gcttggacca gcctcaagcg accccgaggt
      181 gattcgcaag ttgtttgccg ccggtgtcga tgtgtttcgg tttaatttca gtcacggcag
      241 ccacgaggat catcgcgccc gctatgacgc ggtgcgcgcc atagaaaaag agatcgggcg
      301 accagtgggg atcttgctgg acttgcaagg ccccaaactg cggttaggta ccattgaagg
      361 tggcaagatc gaggtcgcac aaggccagca actggtgctc gacatggatg ccacacctgg
      421 caatgccaag cggctgccgc tactgcaccc ggagatcttt gcggccgtta aagccggtga
      481 tcatttgctc atcgatgacg gcaaggtgcg cttagaggtc gtggcctgcg acggcaagtc
      541 agccaccgtc agggtactaa acgatggtgt gctgtctgac cgcaaaggcg tgaatgtgcc
      601 cggtgcgatt ttgcctttgt caccgttgac tgacaaagac cgcaaagact tggccttcgg
      661 gcttgagctt ggggttgact gggtggcgct gtcgtttgtg caacgacccg aagacattga
      721 agagctgaag tcgatcgttc agggccgcgc ctgggtaatg gccaaactag aaaagcccgc
      781 ggccatcgat tcactggatg ccatcgtgcg catttcagat ggcatcatgg ttgcccgcgg
      841 tgatctcggt gtggagtgtc tgccagaaga cgtgcctgtg ctgcaaaagc gcatcatccg
      901 aacttgtcgt gagcaaggca agcccgtagt cgtcgccacg caaatgctgg agtccatgat
      961 tacttcgccg gtacccaccc gcgccgaagt cagtgacgtg gctggtgcca tctacgatgg
     1021 tgtggatgct gtaatgctgt cagctgagtc agcggccggt agttatccga ttgaggcggt
     1081 ctcaatgatg aaccgcattc tgtgtgccac cgaatccgat cccctacaaa agaacaccat
     1141 gcaggcggtc caagcctacc gagataccac ctcgtcggat gcgatttctg ctgcgattcg
     1201 taccgtggcc gacaccttgc cggtggctgc caccgtggcc tacacctcat cgggttcgag
     1261 tgccttgcgt gtggcgcatg aacgacccaa gaccccgatt ctaagcatga cgcctaatct
     1321 gactgttgcc cgacggctga ccttggtctg gggtgtgcat tcgacccaag cgctggatat
     1381 tcagagcatc gatgaggtgg ctgatcatgc aaccgcggag gtcacgcgcc acggatttgg
     1441 tgaacccggc cgtgcggtgc tgattgccgc aggcacgcca tttggtgtgt ctggcaccac
     1501 caatgtgttg cgcattgcgt ggttaactta ggtggttctt agccttgatt caggtgtttt
     1561 tttagtgact tgatcaagtc ggacagtaac ttgcccatgg ccgcgagctt ggctgggcta
     1621 tgtttgccgt catggtgcag ggcatgttca agcgcagcgg cggctttaac gagttcgact
     1681 gcgccaattt ggctggcagc accgcgcaaa ctgtgagcca gtcgtccagc ttcgttgatg
     1741 gtctctgcgt tcagtcctgc gctaagcacc tgtgaaatgc gttcgtctaa accgtcgaac
     1801 tcatcaatga acaccacgat caaacgctca aataggccac gattgccttc catggtgtga
     1861 ttgaggtgtt cccggtcaat gccggcaatc gttggcatgg ggttggtggt ctcactgtct
     1921 tgtttgctgg gttcggtgcc ccgaccagtg acttgctgga tttgtgtgac catgcggtct
     1981 agatcaacgg gcttggccac cagatcggcc atgcctgcct ggcgggcacg ggtttgttgc
     2041 tcggccaata agcccgcggt catcgctaaa acgggcagct tgtctagctc acgcagcgcg
     2101 cggatgttct gtgtggcggt caagccatcc atgatgggca tttggacatc catgagcaca
     2161 cagtcaaagc tagccccatg ttggcgcaaa atcgttaagg cttgggcgcc gttgcttgcg
     2221 agttcgacaa tggcgctttc gcgcaccaag aactcttgaa tcagatcccg aatggaggcg
     2281 ctgtcatcaa cgaccagaat ttttaagcca gccaagcgct caccgcgcga gaccggtgcc
     2341 gcaagggtgt tgcctacttg ttggtgatgg tcaaaggcca gcggcaattc aaaccagaag
     2401 gtgctgcctt ggcctaactg actgttagcc cccagacgac cgcccatgag ttccacgagt
     2461 tgtttgctaa tcgaaagacc aagtccggtg ccaccgtgtc gcctagcagt acccgagtca
     2521 gcttgtacaa aggggttaaa gagctgcggc agcaagtccg cagcaatccc gcagccggtg
     2581 tcagtgacgg ccaagcgcaa caccaacgta ttgtcgcctc ggtttgaaac atcggcgctg
     2641 actttgacct caccagcttc ggtgaacttc atggcgttgc ccacgagatt gcccagcact
     2701 tgttcaatgc gtcttcgatc accaatcaag gtgggcacgg gctcggtagg cgcctctaca
     2761 caaagcgcca cacccggttt ggcccaagcc tcttgccatg agtcaatttg gctcaggatg
     2821 tcttgtaggt taaagggttg ctcttcggtg atgagctgac cggcctcgat cttagacaga
     2881 tccaaaatgt cgttgacaat gcctagcaac agtctgccgg cgctacggat ttgttgcact
     2941 ttctctcgtt gtgggtcagc cagtggttca tcgaccatta agtcagccaa gcccagaatc
     3001 gaggtcagcg gggtgcggat ttcgtgactc atttgcgtca aaaaatcgct tttaaggcgc
     3061 tcgagttgct ccgcgcgtgc cttggcgcgc gcaagtgctt cctcggcgag tttgcgctca
     3121 gtgatatcaa tgagcacgcc ctcccagacg gttgagccat cgtcaagcgg gcggggtttg
     3181 gattcagcgg tgatccagcg ggtttggccg ttgaccacca cccgtgtctc cccccaaaac
     3241 gattcccggt tactgaaagc cttggcattg agttcaagcc agcggtcgtg gtcatcgggg
     3301 tgcacgcagg caaagccctt taacggatcc ccataagctt cttcgcgggt taagccggtt
     3361 aacgccagaa accgggtgct catgaagcga aactgggcca agccaccgtc gggtggttgc
     3421 accatggtgt aagtgcccac gggtaggttc tctgtcagtt cataggcggt gcgttcgatt
     3481 tgatggcgca catcgcgcaa ctctgcttcg gctcgacgtt gctggctgac gtcaatgaaa
     3541 gaggt
//
LOCUS       DATBNL010000224         1636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_162121, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000224 DATBNL010000000
VERSION     DATBNL010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162121"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1636
                     /locus_tag="VIC30_03660"
     CDS             <1..>1636
                     /locus_tag="VIC30_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019247285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEY7803515.1"
                     /translation="ELVDQAHAKFTDKQSEFLSWLKLWAWYHEQVAHKGSQRQLVKLL
                     RQNFLSAARMREWHDIHGQLAALVGEQGWRVNQTEATYEQIHSALLAGLLGQVGLKAD
                     EGGHYQGVRGIRFWIHPGSKLARRAGKWVMASELVETSKLYARCIAKIDPLWIERVGG
                     HLLQRSWSDPRWDAKRGQVVANERASLFGLPIYNGRQVHYGPIDPVQARLTFIREALV
                     PAALDLPFEFVAHNRRLIRQIEQLEHRSRRPDILVDEELIAKFYDRLLAPEICQLVKF
                     RHWFKHLSPEQQAQFKLSKDDLMQHEAAGITSDVFPKSVGWQGTKLKLDYHFEPGSPK
                     DGVTLTVPLAVLNQLSPQRWEWLVPGMVKEKVQWLVKSLPQKLRKHCVPLPDYAKAFH
                     DRWFARLLDPPGSLLAAIMRDMDQQFHVKVSLTDFRVDTLPAHLFMNFKVIDEHGRLL
                     KAGRNLSQIKAELAKQTQQTLQAMANEGEAVVTDAPQDEITSWCFDTLPEIMEIRRQK
                     QTVIGYPALVDQLTHCRIDVFDEPHIAREQHRQGLIR"
BASE COUNT          375 a          414 c          464 g          383 t
ORIGIN      
        1 ttgagttagt cgatcaggcg cacgcgaagt tcaccgataa acagtcggag tttctatcgt
       61 ggttaaaact ctgggcttgg taccacgagc aggtggccca caagggttca caacgtcaac
      121 tggtcaaact gttacgtcag aactttctgt ccgctgcgcg catgcgggaa tggcatgaca
      181 ttcatggtca actcgccgcg ctggtgggtg aacaaggctg gcgcgtcaat cagacggaag
      241 ccacctatga acaaattcac tcggcgttgc tcgcgggatt acttggacaa gtcggtttaa
      301 aagccgacga aggtggccat taccaaggcg tgcgaggtat tcggttctgg atacacccgg
      361 gatctaagtt ggctcgtcgg gctggcaaat gggtgatggc ctctgaactg gtcgaaacca
      421 gcaagctata cgcacgctgt attgccaaga tagacccact gtggattgag cgtgtgggcg
      481 gtcatttact gcaacgcagc tggtccgatc cgcgttggga cgctaagcgc gggcaggtcg
      541 ttgccaacga acgagcatcg ttatttggtt tgccaatcta caacggtcgg caggtgcact
      601 atgggccgat tgatccggtg caagcccgcc tgacatttat tcgtgaagca ttggtgccag
      661 cagcgcttga tttgccattt gagtttgtgg cgcataacag gcggttgata cgacaaattg
      721 agcaactcga gcatcgcagc cgccgccctg atattctggt cgatgaggaa ctgatcgcca
      781 agttctacga tcgattgctg gcgccggaga tttgtcaact tgttaagttc aggcactggt
      841 ttaagcactt atctcccgag caacaagcgc agttcaagct gtccaaagat gatctcatgc
      901 agcatgaggc cgccgggatc accagtgacg tgtttccaaa gtctgtgggc tggcagggca
      961 ccaaactgaa gcttgactat cactttgagc ccggttcgcc caaagatggt gtgacgctca
     1021 ctgtgccgtt agcggtgctc aatcagctaa gtccgcagcg ttgggaatgg ctcgtgcccg
     1081 gcatggtgaa agagaaagtt cagtggttgg ttaaatctct cccacaaaag ctgcgtaaac
     1141 actgtgtgcc gttgcccgac tacgccaaag cgtttcatga ccgctggttt gcccgtttgc
     1201 ttgacccgcc gggtagtttg ttggctgcca tcatgcgcga catggatcag cagtttcacg
     1261 tcaaggtcag tctgacggac tttcgggttg acacgctgcc tgcgcacttg tttatgaact
     1321 ttaaagtcat cgatgaacat ggtcggctgt taaaggctgg tcgtaacctc tcgcaaatca
     1381 aagctgagct tgcgaaacaa acccagcaaa ccttacaggc catggccaat gaaggtgagg
     1441 cggtggtcac cgatgcgccg caagacgaga tcacgagctg gtgtttcgat acgttgcccg
     1501 agatcatgga gattcgtcga caaaagcaaa ccgtcattgg atatcccgcg ctggttgatc
     1561 aactcaccca ctgtcgtatt gacgtgtttg atgagccgca catcgcacgc gagcagcacc
     1621 gtcaagggct tattcg
//
LOCUS       DATBNL010000225         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_122347, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000225 DATBNL010000000
VERSION     DATBNL010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122347"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VIC30_03665"
     CDS             complement(<1..1168)
                     /locus_tag="VIC30_03665"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEY7803516.1"
                     /translation="MSKRVGGFINQDGLNAPDSPTSVSASAGDESASVSFTAPSDVGG
                     SAVTGYVATSNDGIGATGSASPITVSGLTNGTPYTFRVWALNAFGYSAPSDASGSVSP
                     QLQRGLFGGGQTTENVNIISYVSLATTGNAIDFGDLTYSTDAQGLGACASTTRGVFAG
                     GSNSENTINYVTIATTGNALDFGDLTLGRRARGCSSSTRGLFAGGDGAPGAKNVIDYI
                     TIASTGNAIDFGDLITELENQAACSSPTRGVVAGGTFPQTNVIQFVTIASTGNATDFG
                     DLTAATDGLAGCSSSTRGLFGGGGDTNTIQFITLATTGNATDFGDLTLEIKKLAACSS
                     ELRGLFGGGDISGDVRQNVISFVTIASAGNAADFGDLTAAITELAACSSAHGGLS"
     gene            complement(1181..1555)
                     /locus_tag="VIC30_03670"
     CDS             complement(1181..1555)
                     /locus_tag="VIC30_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803517.1"
                     /translation="MAAPNIVNVTTIIGKSAVVDLTTTAATAVVSNAAASGKVFKINS
                     LVVSNVDGTNAADITISYYSQDDIGGTATQIVSTISVPADASLVVIDKNTSIYLEEDR
                     SIGATAGTASDLKVLVSYEEIS"
     gene            complement(1980..>2183)
                     /locus_tag="VIC30_03675"
     CDS             complement(1980..>2183)
                     /locus_tag="VIC30_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803518.1"
                     /translation="RTNLGLVIGTNVLAFDSNLQAFVTAFTLPTVDGTSGQAIVTDGS
                     GALSFADAGISTGKSIAMAIVFG"
BASE COUNT          495 a          602 c          587 g          499 t
ORIGIN      
        1 aggatagtcc tccgtgggcg gatgagcagg ctgcaagctc tgttatagcc gcagtcaggt
       61 cgccaaagtc cgcggcgttt ccagcggagg cgatggtaac gaatgaaatc acattttgtc
      121 taacgtcccc agaaatgtct ccgccaccaa acagacctct tagttcagaa gaacacgccg
      181 caagtttttt tatctcaagt gttaggtcgc caaagtccgt ggcgtttccc gtagtggcaa
      241 gggtaataaa ctgaatggtg ttcgtatcgc caccgccacc aaacaatcct cgggttgaag
      301 acgagcagcc cgccaaaccg tctgtggctg cggtcaagtc tccaaagtca gtagcgttcc
      361 ctgttgaagc aatggtcaca aactgaataa cgtttgtctg aggaaacgtg ccacccgcaa
      421 ccacacctct tgttggcgat gagcatgctg cttgattttc taactcggtt ataaggtcgc
      481 caaaatcaat cgcgtttcca gtggacgcaa ttgtaatgta atcaatgacg ttcttagccc
      541 ccggtgcacc gtctccaccg gcaaacaatc ctcgagtcga ggaagaacag cctcgcgcac
      601 gacgacctag cgttaggtct ccaaagtcaa gagcgttccc cgttgtggca atcgtgacgt
      661 agttaatggt gttttccgag ttcgatccac cggcaaaaac gcctcgtgtg gtagaagcac
      721 acgcgccaag gccttgtgcg tcagtgctgt atgtaaggtc accaaagtca atggcgttcc
      781 ccgttgtggc gagacttaca taactgataa tattaacgtt ttcggtggtt tggccgcccc
      841 caaacaagcc cctctgaagc tgcggactaa cactcccact cgcatcactc ggcgcagagt
      901 acccaaacgc attgagcgcc cagacacgga aggtgtaggg tgtgccgttg gtcaagccag
      961 acacagtgat aggcgatgct gaaccggtgg caccgatgcc gtcattggac gtagcgacat
     1021 acccagtgac agcagagccg ccaacgtcag acggcgcggt aaagctgaca cttgccgact
     1081 catctccagc agacgcgctt acactcgtcg gtgaatcagg agcgttcagg ccatcctgat
     1141 tgatgaaccc gcctacacgt ttcgacatag cgagcgtcct ttatgatatt tcctcatagc
     1201 tcaccagaac cttgaggtcg cttgcagtgc cagcagtcgc accaatcgag cggtcttcct
     1261 caaggtagat cgaagtgttc ttgtcgatca ccacgagcga ggcatccgca gggacgctga
     1321 tcgtgcttac gatctgggtc gctgtgccgc cgatgtcgtc ttggctgtag tagctgatcg
     1381 tgatgtcggc agcgttcgtg ccgtccacgt tcgagaccac cagcgagttg atcttgaaaa
     1441 ccttgccgct cgctgcggcg ttgctcacca ctgcggttgc agcggtggtt gtcaaatcga
     1501 ccacggcaga cttgccgatg atcgtggtga cattgacgat atttggcgcg gccatgctta
     1561 acctccgagg tactttatgg cccgcatcat aagggccgga tcgtcgccga agcaaccgag
     1621 tgcaatgttg cagttatggc atagcaggcc acggattgca cctgtttcat gacagtggtc
     1681 gagatgcaga ccacgctgtg tggtcggctg gttttggcaa atcgcacact ttccgccctg
     1741 cttttcgtgc atggcgaagt agtcttgcgg ctccataccg tacatggcgc ggactctggt
     1801 ggcctgcttt tcgacaggag tttttgcatg ccaatgcttg gagctgcgcc ttctatgaca
     1861 aggtttgcaa cgcgcgttgg tcttgcgccc agtgctatca agataaaaaa gcacacgaag
     1921 atctaccccg cagtcagggc agggggcagt gtgctttggc ctatcttgaa gtgtctttgt
     1981 catccaaaca caatcgccat ggcaatgctt ttaccagttg aaatgccagc atccgcgaac
     2041 gaaagcgctc ccgagccgtc tgttacaatt gcctgtccgc tcgtgccatc aaccgtgggc
     2101 agcgtgaaag cggtaacgaa ggcctgcagg ttagagtcaa aagccagcac attggtgcca
     2161 atcaccaagc ccaagttggt gcg
//
LOCUS       DATBNL010000226         1845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_191627, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000226 DATBNL010000000
VERSION     DATBNL010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191627"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VIC30_03680"
     CDS             complement(<1..353)
                     /locus_tag="VIC30_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY7803519.1"
                     /translation="MNSSTTSSPSPRFGGSMVAMVTPMHPDGSLDLASYKQLIDWHVQ
                     EGTDALVVVGTSGESPTVDMDEHAELIQVAVEHAAGRIPVIAGVGANSTAEAIHLAEH
                     AQKVGAHAGLSVVPY"
     gene            complement(482..1141)
                     /locus_tag="VIC30_03685"
     CDS             complement(482..1141)
                     /locus_tag="VIC30_03685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEY7803520.1"
                     /translation="MLELEDLIHTIVLFALPVVFAITLHEAAHGYVARLFGDPTATLA
                     GRVTLNPTRHIDPVGTIAVPLGILLMSKLFGGPPLLFGWAKPVPVNFGRLKNPKRDML
                     WVALAGPGANLLMAILWAMSVRFLLEAGAGRESFWFQMAVIGIQINLVLMALNLLPLL
                     PLDGGRVLYSLLPHQLAWQYGRLEPYGLMILIVLLLTGSLWFFLEPFMALGRWIVQLF
                     L"
     gene            complement(1152..1775)
                     /locus_tag="VIC30_03690"
     CDS             complement(1152..1775)
                     /locus_tag="VIC30_03690"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEY7803521.1"
                     /translation="MSEFFSVHPTHPQPRLMNQAAELIASGGVLAIPTDSGYALVAHL
                     DDKQAADSLRRFRGLDSRHHLTLLCRDLSEIGQFAKVDNQQYRLLKQATPGPWTFILQ
                     ASKEVPKRVSHPSRKTIGIRVPNHPVVSALLELVEAPVLATTLILPDQDAPLVDPEDV
                     REAFGKQLAGVIDAGRCPWQPTTIVDLSGSTPEVLRRGAGDPADIGL"
BASE COUNT          481 a          535 c          471 g          358 t
ORIGIN      
        1 taatacggca ccacggataa ccctgcgtgt gcaccaactt tttgtgcatg ttcggccaaa
       61 tgaatcgcct cggccgtcga gttagcacca acaccggcaa tcacgggaat acggccagca
      121 gcatgctcga ctgccacctg aatcaactca gcatgctcgt ccatgtcgac agtgggagac
      181 tcgccggacg tgccaaccac caccagcgca tctgttcctt cttgaacgtg ccagtcgatc
      241 agttgtttgt agctcgccag atcaagactg ccatctggat gcatgggggt caccattgcc
      301 accatgctgc caccaaagcg tgggcttggt gaagaagttg tagacgaatt catgttcaat
      361 gatcagcgat taaaccggtt taaggaatag ctcagcgcag ccgtttgacg agctcatgca
      421 tgaacctgat agtgtaacgg aagctcgccg gccatgtacg gttctcaatc tcgcagcgtc
      481 gtcacaagaa tagttgcaca atccatcgcc caagcgccat gaaaggttcc agaaaaaacc
      541 acaagctgcc agtgagcaac agcacaatca gaatcatcag accgtagggc tcaagccgcc
      601 catactgcca ggccagctgg tgtggcaaca ggctatagag cacgcgcccg ccgtctaacg
      661 gcaatagcgg caacaggttc aacgccatga gcacaagatt aatctgaatc ccaataactg
      721 ccatctgaaa ccagaagctc tcgcgcccgg cgccagcttc caacagaaac cgcactgaca
      781 ttgcccacag aatggccatc agcaagttag ccccaggtcc ggccagcgca acccagagca
      841 tgtcacgctt agggttcttg agccttccga aattcactgg cacgggcttg gcccacccaa
      901 acaacaacgg tggaccacca aacaacttag acatcaacaa gattccaagc ggtacggcaa
      961 tcgtgcccac cgggtcaatg tgcctggtcg ggttcaaggt gacgcgcccg gctagtgtgg
     1021 ccgtcgggtc accgaataag cgtgccacgt aaccgtgggc cgcctcgtgc agcgtaatcg
     1081 caaacaccac cggcagcgca aacagcacaa tggtgtgaat cagatcttct agctcaagca
     1141 tgttggttgc ctcataaacc gatgtcagcc ggatcaccgg caccgcgacg caacacttca
     1201 ggtgttgaac cggataaatc cacaatggta gttggttgcc aaggacagcg accggcatca
     1261 ataacaccgg ccagctgctt gccaaacgcc tcgcgcacat cttctggatc caccagaggc
     1321 gcatcttgat caggcagtat caatgtggtg gccaacacag gtgcctctac cagttctagt
     1381 aaagcgctca cgaccggatg gttcggtaca cggataccga tggttttgcg tgacggatgc
     1441 gaaacgcgct tgggtacttc tttagaggct tgcaagatga atgtccaagg gccaggcgtc
     1501 gcctgcttga gcaaacggta ttgttgattg tcaactttgg cgaattgtcc gatttcagac
     1561 aggtcgcgac acaacagggt caaatgatga cgagaatcaa gaccccgaaa gcgccgcagc
     1621 gaatcggccg cctgcttgtc atcaaggtgc gcaaccaacg catagcccga atccgttggt
     1681 attgctaaca cgccacccga cgcgatgagt tcagcggcct gattcatcaa ccggggctga
     1741 gggtgggttg ggtgtaccga aaaaaactca ctcatggcta tcaccaagtc gttaatgact
     1801 caaagcctac cacagcgagc gttcgacaca acagttaaac tattg
//
LOCUS       DATBNL010000227         1621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_42617, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000227 DATBNL010000000
VERSION     DATBNL010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42617"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1416)
                     /locus_tag="VIC30_03695"
     CDS             complement(<1..1416)
                     /locus_tag="VIC30_03695"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006220233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEY7803522.1"
                     /translation="MKDRSSNSYQRRRPSNKSRETPSEAGTGRLGQVTGLLKQVLTWR
                     EAADTVLSRYFRENRALGARDRSQVADAVFDVLRHLRRYRHDAQSWPGNHEQALAIRG
                     LYNSLDEASRLLVLDADQLAWANHGASINQGSLAFGLRYSLPEWIEQTLITLPQPQSY
                     AAALLKGASVDLRVNTLKGTRDDVLAQIQRQLEGSGFEAHAMTYSPDGIRLTGHPPIN
                     RWALFEKGVIEVQDEGSQLLAHLVAPKRGEMVIDFCAGAGGKTLALGALMRSTGRLYA
                     FDVSAARLARAKPRFARSGLSNVHPVVIRNERDDRVARLAGKAHRVLVDAPCTGLGTL
                     RRNPDLKWRQTPASLARLCQEQANILAQAAKCVRPGGRLVYATCSFLPEENEQQIERF
                     LENHPDYSLVSATECLGTDLTKGNRGAEGTEDTCVEHGGVEHGSTEHQSIEDSDMLRL
                     RPDWHGTDGFFAAVLQRAEKVA"
     gene            complement(1413..>1621)
                     /locus_tag="VIC30_03700"
     CDS             complement(1413..>1621)
                     /locus_tag="VIC30_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017454367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEY7803523.1"
                     /translation="DHGPIIAQAALAVLEDDTPTSLEKRVLQAEHVLYPQVVQWLAQG
                     LVQVNESGQVNVTGVSSRHLWIES"
BASE COUNT          362 a          487 c          410 g          362 t
ORIGIN      
        1 cgccactttc tctgcccttt gcagcaccgc cgcaaaaaaa ccatccgtac catgccaatc
       61 aggcctgagt cgcaacatat cgctgtcttc aatcgactgg tgctcggtac tgccatgctc
      121 aacaccgccg tgctcaacac aggtgtcctc cgtgccctca gctcccctat tgcctttcgt
      181 tagatcagta cctaggcatt cagttgcact gactagcgaa taatctggat ggttctctaa
      241 aaatcgctct atttgctgct cattttcttc gggcaagaaa ctacaagttg cgtaaaccaa
      301 tcgaccgccc ggacgcacac atttggccgc ttgtgccagg atattggctt gctcttggca
      361 caaacgcgcc aacgaggccg gcgtctgacg ccacttcaag tccggattac ggcgcaatgt
      421 cccaagaccg gtacagggtg catcaacaag tactcgatgg gccttacccg ctaagcgcgc
      481 cacacgatcg tcgcgctcgt tgcgaatcac caccgggtga acattgctca gaccgctacg
      541 cgcgaaccgg ggtttggcgc gcgccagacg agccgccgag acgtcaaacg catacaaccg
      601 tccggttgaa cgcatcaacg cgccaagtgc caaggtttta ccgcctgcac cggcacaaaa
      661 atcaatcacc atttcgccac gcttgggtgc caccaaatgg gccaacaact ggctgccttc
      721 gtcttgaact tcaatgaccc ctttctcgaa taacgcccaa cggttaatcg gcgggtgtcc
      781 ggtcaggcgt atgccgtctg gcgaataagt cattgcatgg gcctcaaagc cactgccttc
      841 taactggcgc tggatttgag ccaatacgtc atctcgcgtg cctttgagcg tgttgaccct
      901 cagatcaaca gacgcgcctt ttaacaacgc agcagcgtac gactgcggct gcggcaaagt
      961 gatgagtgtt tgttcaatcc attcaggcaa gctgtatctg agcccgaaag ctaagctacc
     1021 ctggttaatc gacgcaccat gattggccca agccaactga tcggcatcga gcaccagcaa
     1081 acgactcgcc tcgtctaacg agttatagag ccccctgatt gccagagctt gctcgtggtt
     1141 acctggccag gattgtgcgt catgacgata gcggcgcaag tggcgcagca catcgaatac
     1201 ggcatcagcg acctgggatc gatcgcgcgc gcctaaggct cggttctcac gaaagtaacg
     1261 cgacaacacc gtgtcagccg cttcacgcca cgtaagtact tgctttagca gcccagtgac
     1321 ttgacctaat cgtccggtac cggcttctga gggcgtctca cgtgacttgt ttgaaggccg
     1381 acgtcgttgg taagaattgc tacttcgatc tttcatgatt cgatccataa gtggcgtgat
     1441 gacacgccgg tgacgttaac ctggcctgat tcgttgactt gcacgagacc ttgtgcgagc
     1501 cactgaacga cttgcgggta aagcacatgt tcggcctgta ggacccgctt ttctaaggac
     1561 gttggggtgt catcctctag aactgcaagc gcggcttgcg cgatgatggg cccatgatcc
     1621 a
//
LOCUS       DATBNL010000228         1825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_171727, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000228 DATBNL010000000
VERSION     DATBNL010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171727"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VIC30_03705"
     CDS             complement(<1..807)
                     /locus_tag="VIC30_03705"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY7803524.1"
                     /translation="MKSSRLIITAVLVVTVAGWIGWRTWQGPVVSVAVVESEDLVQTV
                     VATGRVIATSTAKIGAEITGIVVDRHVRDGDVVEKGDLLLTLRADDLAARVREARASL
                     KNLRQSRRLQAESALEQAQSQLEQAEREAQRRTDLLASESISREIVEKAQNAEIVAEA
                     NYRQAKLLADALAPGGPEETILMERLAAAEAALQKTEIRAQFPAVVLTREVEAGDVVQ
                     PGRTLMELARLGQTEVLVPVDERNLGILALGQPAVCIADAYAQLQFDATVD"
     gene            complement(841..>1825)
                     /locus_tag="VIC30_03710"
     CDS             complement(841..>1825)
                     /locus_tag="VIC30_03710"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008906988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY7803525.1"
                     /translation="RSTQTKMIGQDVAMPVAIAPTGLTGMQHTDGEILAAKAAKAFGV
                     PFTLSTMSICSIEDVAQETGNHPFWFQVYVMKDRDFIERLIERAKVANCSALVLTLDL
                     QILGQRHKDIRNGLSAPPKLTLANILNIATKPRWALGMLGTKRRQFGNIVGHVKGVTD
                     MSRLSEWTASQFDPKLNWDDVQWIKKLWGGKLILKGIMDVEDARLAAQSGADALIVSN
                     HGGRQLDGADSSINALPAIVDAVGKQIEVHMDGGIRSGQDVLKARALGAQGCYIGRSF
                     LYGLGAMGEAGVTKALELIHNELDLSMAFCGVTDVEKVDKRILLPGTFPTV"
BASE COUNT          385 a          517 c          493 g          430 t
ORIGIN      
        1 atccacggtg gcatcaaatt gcagttgtgc gtaggcatcg gcaatacata cagcgggctg
       61 acccaaggcc aaaatgccca aattacgttc gtccacaggc actagcacct cggtttgtcc
      121 caagcgggca agctccatca acgttcgtcc gggctgaaca acatcgccag cttcgacttc
      181 acgggtgaga accaccgctg gaaattgggc gcggatctcg gttttttgta gggcggcctc
      241 ggctgctgcc aagcgttcca tcagaatcgt ttcttctggt ccgcccggcg ccagtgcgtc
      301 ggcaagcaac ttggcctgac ggtagttggc ttcagcaacg atttctgcat tctgtgcttt
      361 ctcgacaatt tcacgtgaga tggactctga agccagcaga tcagtacgcc tttgtgcttc
      421 acgctcagcc tgctcgagtt gggattgtgc ttgctcaagc gcagattcgg cttgaagtct
      481 gcgcgattgg cgcaggtttt ttaacgaggc acgggcttcg cgcacccggg cggccaaatc
      541 atcggcgcgc agggtcaaca acaaatcacc tttttctacg acgtcgccat cacgcacatg
      601 tcggtcaacc acgatgccgg tgatttcagc accgattttg gcagtggatg tggcaatcac
      661 tcgaccggtg gcaaccacgg tctgcaccag gtcttcggat tcgactactg caacactgac
      721 cacgggtcct tgccaagtgc gccaaccaat ccagccggca accgtgacga caaggacagc
      781 ggtaataatc agacgggatg acttcatgtc gtcaccccgt tcatacaggc cgctcggttg
      841 ttagacagtg ggaaatgtcc cgggtagcag gatgcgcttg tcaacttttt caacatcggt
      901 gacaccacaa aaggccatcg acaagtcgag ctcattgtga ataagctcca aggctttcgt
      961 gaccccagcc tcgcccatgg cgccgaggcc atacaggaag ctgcgtccga tgtaacaacc
     1021 ttgtgcgccg agtgctcggg ctttgagcac gtcttgaccg ctgcgaattc cgccatccat
     1081 gtgtacttca atttgtttcc ctaccgcatc aacaatggct ggcaacgcgt tgatgcttga
     1141 atctgctccg tcgagctggc ggccaccatg attgctgaca atcaaagcat cggctccgga
     1201 ctgagccgcc agcctggcgt cttcaacgtc catgatccct tttaagatca gtttaccgcc
     1261 ccaaagtttc ttgatccatt gcacgtcatc ccaatttaac ttgggatcga attgcgaggc
     1321 tgtccattcg ctaaggcgcg acatgtcagt cacaccctta acatgcccca cgatgttgcc
     1381 aaactgacgg cgcttggtgc ccagcattcc caaggcccag cggggcttgg tggcgatatt
     1441 caggatgttg gctagcgtca gttttggcgg tgcgcttaga ccatttcgga tgtctttgtg
     1501 gcgctggcca aggatttgca gatccagcgt taacaccagt gcagagcagt tggcgacctt
     1561 ggcacgctca attaatcgct cgataaagtc gcggtctttc atgacgtaga cctgaaacca
     1621 gaaggggtga tttccggttt cttgggcgac gtcttcaatc gagcagatgc tcatggtcga
     1681 tagtgtgaat ggcacgccaa atgctttggc agccttggct gccaggatct caccgtcagt
     1741 gtgctgcata ccagtcaatc cagtgggcgc gatggccact ggcatggcga cgtcttggcc
     1801 aatcatcttg gtttgggtgg agcgg
//
LOCUS       DATBNL010000229         3668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_72427, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000229 DATBNL010000000
VERSION     DATBNL010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72427"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(352..3126)
                     /locus_tag="VIC30_03715"
     CDS             complement(352..3126)
                     /locus_tag="VIC30_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY7803526.1"
                     /translation="MTRFKPMSARIIAISFSALSVLTVLFSPAQALTLPDGVNKVTEV
                     EGISEYEIDSNGFRFLLAPDNAKPSVAVNMTYLVGSRHENYGQTGMAHLLEHMIFKGT
                     PTTRNALAEFSKRGLRANGTTSEDRTNYFATFAANEETLDWYIRWQADAMINSIIARE
                     DLDSEMTVVRNEMERGENSPFRMLYQRTHAAAFDWHNYGKSVIGARSDVEEVDIEQLR
                     DFYRVYYQPDNAVLTVAGKFDEQDIINTISDAFGSIPAPDRMLPREYTIEPVQDGERR
                     VTLRRSGGTPLAAAVYRIPSAGDPDYPALELATMMLSDVPSGRLYKALVQTDLASDVF
                     GFARDMYGPGTVMFGAQLKADMDPNEALDAMTATLEDLSANPFTEEELKRARSQWMNG
                     WDELFSNVQRIGVAISEPIAQGDWRLMFKNRDRIKEVTLEDVQRVVDQYFVTANRTEG
                     LYIPTEQPERAPAKERFDIEPLLQGYVGDIQAEMVEAFDPTPASIDKLTERRVLNLPR
                     GPVKMALLNKPTRGQRVQADILVQFGDLESLKGQATVSTVTAALLDNGTEAMTRQQIR
                     DRLEELNAEMSIGGSGTGVSISISTTGKNLPEAIDLGLHILKHANFPESELDEYITQA
                     VTSIKANMAEPGALASRTLARYDNPWPSDDLRYVPTFEESIARYEAVKRSDLVAFHNA
                     FYGAGNITVAVVGAFEPEAVVQTVSTSLKDWRQAPAYQRVPDPYQPIEPTMIRIDTPD
                     KANAVFLARLPLQIQDTDPDYPALVMGNYLLGGSSNSRLWTRIRETDGLSYDVRSSLA
                     VSAFEPSGSLRFSGIFAPENWEKFETAMQEELNRAVSEGFTEQEVADGVQSLLNLLQL
                     NRAQDGVLANAWIDYLQENRTFAWSAAFDEKLKALDAETVNAALRKYLKPEGLAQALA
                     GDFKKEQETK"
     gene            complement(3317..>3668)
                     /locus_tag="VIC30_03720"
     CDS             complement(3317..>3668)
                     /locus_tag="VIC30_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003821189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803527.1"
                     /translation="HLWKSNRRRQMERFDTWDILRKFNADWRLIFVGDASMSPYEVLQ
                     PGGSVEHYNKEAGAQWLQRMVTTWPKAVWLNPEPQASWAYRQSIALIRNIMQDRMYPV
                     TVAGLEQAMRLLSK"
BASE COUNT          767 a          973 c         1044 g          884 t
ORIGIN      
        1 acccagtgcg gcaaactcgg gtccgcggtg atcaatcgta gggtgatcaa tggcgcgcag
       61 aacgcgatcg ggcacgttac tcggtcccgg aatttgcagg aaatgacggc cttggccggt
      121 acggttcagg cgggttgcag catgaatggg ggtgtgtgtt gtcatggtgg tgtgcaggtg
      181 aatatggccg acaacccccg ttgtactcga gaagagggct tgtgtcacct tgcccattgc
      241 acctgttcct cgcattcggt cctcgcattc ggtcctcgca ttcggtcctc gcaaaaaaat
      301 cgggtgctca cacttggtga gcacccgatc aagtttgtcg cattcaagcg cctacttagt
      361 ttcttgttcc ttcttaaagt caccggccag cgcctgtgcg agcccctcag gtttgaggta
      421 tttgcgcagg gctgcattaa cggtttcggc gtccagcgct ttgagcttct cgtcgaacgc
      481 agctgaccag gcgaacgtgc ggttttcttg gaggtagtcg atccaagcgt tggccaagac
      541 gccatcttgt gctcgattta actgaagcaa attcagtagt gactgcacac catcggcgac
      601 ttcttgttca gtgaagccct ctgacactgc acgattgagc tcttcttgca tagcagtttc
      661 gaacttctcc cagttctcag gggcaaagat gcccgagaat cgcaggctgc cgcttggctc
      721 aaaagctgag accgccaaac tgcttctgac atcgtaggac aggccatcgg tttcacggat
      781 ccgtgtccat agacgggagt ttgatgaccc gccaagcaag tagttaccca tgaccaaggc
      841 cggatagtcg gggtcggtgt cctggatctg caagggtagg cgagccagaa acactgcatt
      901 ggccttgtca ggcgtatcga tacggatcat ggtgggttca attggctggt aggggtccgg
      961 cacacgctgg taagccggtg cttggcgcca gtccttgagc gacgtgctca cggtttgcac
     1021 aaccgcttcg ggctcgaagg cgccaaccac ggccacggtg atattgcccg caccgtaaaa
     1081 cgcattgtga aacgccacca agtcactgcg cttgactgct tcatagcgag caattgactc
     1141 ttcgaaagtg ggcacatagc gcagatcgtc agaaggccac gggttgtcgt agcgcgccag
     1201 tgtgcgtgaa gccagcgcgc ctggttcagc catattggcc ttgatgcttg tgactgcctg
     1261 cgtgatgtat tcatcaagct cactttctgg gaagttggcg tgcttgagta tgtgtaaccc
     1321 caagtcaatg gcctcgggca agttcttgcc tgtggttgag atgctgatcg atacacctgt
     1381 gccgctgcca ccgatagaca tctcggcgtt gagctcctcc aagcggtcac ggatttgctg
     1441 gcgcgtcatg gcttcagtac cgttgtcaag taaagctgcc gtcactgtcg agacggttgc
     1501 ttggcctttg agtgactcga gatcaccaaa ctgcaccaag atgtcggctt gcacgcgctg
     1561 gccacgggtg ggcttgttta aaagcgccat tttgacggga ccacgtggca aattcagcac
     1621 acgtcgctcg gtaagcttgt cgatgctggc aggtgtggga tcaaaggcct cgaccatttc
     1681 agcttgaatg tcaccgacat agccctgcag taacggttcg atatcgaagc gctctttggc
     1741 cggtgcgcgc tcaggctgct cagtggggat gtaaagccct tcagtgcggt tggccgtcac
     1801 aaagtattgg tcgaccacgc gctgcacgtc ctcgagggtg acttctttga ttcggtcacg
     1861 gtttttaaac atcagacgcc agtcgccttg ggcaattggc tcagagatcg ccacgccaat
     1921 gcgctgcacg ttgctaaaga gctcgtccca accattcatc cattggctgc gggcacgctt
     1981 taactcttct tcagtaaagg ggttggcgga taagtcctcg agtgttgcag tcatggcgtc
     2041 caacgcttcg ttgggatcca tgtcggcttt taattgcgcg ccaaacatca ctgtgcctgg
     2101 gccatacatg tcgcgggcaa agccaaatac gtcgctggcc agatcggttt gcaccaaggc
     2161 tttgtaaagg cgaccagatg gcacatcgct tagcatcatg gtcgccaatt ccagtgctgg
     2221 gtaatctgga tcaccagcgg acgggatgcg atagacggct gcggccagcg gtgtgccacc
     2281 actgcgacgc agcgtcacgc gcctttcgcc gtcttgcacc ggctcaatgg tgtattcgcg
     2341 gggcagcatt ctgtctggtg ccgggataga accaaatgca tcagagatgg tgttgatgat
     2401 gtcttgctcg tcaaacttgc cagctaccgt gagcacggcg ttgtcgggtt ggtaataaac
     2461 ccggtagaag tcacgcagtt gctcgatatc gacctcttcg acatcggatc gtgcgccaat
     2521 gacgctctta ccgtagttgt gccagtcaaa ggccgcagcg tgggttcttt gatagagcat
     2581 acgaaatggg ctgttctcgc cgcgttccat ttcattgcgt accacggtca tttctgaatc
     2641 aaggtcttcg cgggcaatga tcgaattgat catggcgtca gcctgccagc gaatgtacca
     2701 gtccagtgtc tcttcgttgg ccgcaaaggt ggcaaagtaa ttggtgcgat cctcagacgt
     2761 cgtcccgttg gcacgcagtc ctcgcttaga aaactccgcc aaggcattgc gcgtggtcgg
     2821 tgtgcctttg aagatcatgt gttcgagcag gtgagccatc cccgtttggc cataattctc
     2881 gtggcgtgaa ccgacgaggt aggtcatgtt tacagccact gatggcttgg cattgtcggg
     2941 ggcgagcaga aacctaaaac cattgctgtc gatttcgtat tccgatatgc cttccacctc
     3001 ggtgactttg ttcacgccgt ctggcaatgt cagtgcttgg gctggcgaaa acagtaccgt
     3061 caataccgac agtgccgaga agctaatggc aataatccgg gcagacatgg gtttaaagcg
     3121 agtcatgatc aatccatttg ttggggcatg aatattgatg aggatgataa agatatcttc
     3181 gttctgttgg acgagtatcc gcgctgaagg ttccgcaatc taagtagtct ggaccaaatc
     3241 gtgccgcatg ccaatgatgt gtcgcaaacc gcatgccgca aaccgcatgc cgcaaaccgc
     3301 agtcctctgc tcgggactat ttggacaata ggcgcatggc ttgctcaagg ccggctactg
     3361 tgaccgggta catgcggtcc tgcataatgt tgcgaattaa tgcaattgac tgtcggtaag
     3421 cccaagaagc ctgcggttcg ggattaagcc aaaccgcttt gggccaggtt gtgaccatac
     3481 gctgcaacca ctgggcgcct gcttctttgt tgtagtgctc aaccgaaccg ccaggctgaa
     3541 gcacttcgta ggggctcatc gacgcatcac cgacaaaaat caggcgccag tcggcattaa
     3601 atttgcgcaa aatgtcccag gtatcgaagc gttccatctg ccgacggcgg ttcgatttcc
     3661 acaagtgt
//
LOCUS       DATBNL010000230         2368 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_92433, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000230 DATBNL010000000
VERSION     DATBNL010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92433"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..156)
                     /gene="pyrB"
                     /locus_tag="VIC30_03725"
     CDS             complement(<1..156)
                     /gene="pyrB"
                     /locus_tag="VIC30_03725"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017454302.1"
                     /note="catalyzes the transfer of the carbamoyl moiety from
                     carbamoyl phosphate to L- aspartate in pyrimidine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEY7803528.1"
                     /translation="MRNPQLNRHGELTHLITTEGIPRDILTHILDTAQTFVPLAERDV
                     KKVPLLRG"
     gene            complement(156..683)
                     /gene="pyrR"
                     /locus_tag="VIC30_03730"
     CDS             complement(156..683)
                     /gene="pyrR"
                     /locus_tag="VIC30_03730"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014749788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEY7803529.1"
                     /translation="MTASDLKLPQAQQLYETLRQGVADLIERLPAGEVHLVGIHSGGA
                     WLAERLHQDLGLATPLGTLNISFYRDDFNRIGLHPQVEPSDVGFDVVDRHLIVVDDVL
                     YTGRTIRAAMNELFDYGRPASIKLVVLIDRGQRELPICADFAAWRFEVPPAANLVLEK
                     SDDGDFTLHIEPKEA"
     gene            complement(686..1099)
                     /gene="ruvX"
                     /locus_tag="VIC30_03735"
     CDS             complement(686..1099)
                     /gene="ruvX"
                     /locus_tag="VIC30_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEY7803530.1"
                     /translation="MPDERTLLAFDYGTHRIGVALGNALIAHAHPLEIIDTPEKVKRF
                     ARIEELIVQWQPDALVVGLPLTAGGGEQLATRQAKRFANQLEGRYGLPVTLVDERGSS
                     LEAQEIVGNAADDAVAAAIILQRYFDARTHTEPGQ"
     gene            complement(1092..1757)
                     /locus_tag="VIC30_03740"
     CDS             complement(1092..1757)
                     /locus_tag="VIC30_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEY7803531.1"
                     /translation="MSASVDLSGHFLMAMPGMVDGDLAGTVIYVCEHSDRGALGLVIN
                     RPIDLSLASLLEKADLVADVPTGEEVDAGLESVEDLARQPQEKPAQQAGLGSSRASAE
                     DLPVYFGGPVQTDRGFVLHKPAGDYSSSISLGQTLALTTSRDVLQAVANGQGPEKIFV
                     TLGYAGWGAGQLEQELAQNAWLSVAADESIIFEMPPESRYPAAMRLLGVDPAQLAGSA
                     GHA"
     gene            complement(1765..1929)
                     /locus_tag="VIC30_03745"
     CDS             complement(1765..1929)
                     /locus_tag="VIC30_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015389172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEY7803532.1"
                     /translation="MRTYMCLICGWIYDEAEGCPEEGIAPGTKWEDVPPNWVCPECGA
                     RKEDFEMMEV"
     gene            1987..2364
                     /locus_tag="VIC30_03750"
     CDS             1987..2364
                     /locus_tag="VIC30_03750"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEY7803533.1"
                     /translation="MPASTPPAVLSFGLLDPTGRIDIPADSITAAAFETHALSVPCAT
                     AVADSTGLYALERANAEFIDEQARYLLEDMPIGAIKAGTVVCPEAAGVIASAAADYSD
                     APLVLQLGPQEDPDTNSDHNTRA"
BASE COUNT          532 a          734 c          604 g          498 t
ORIGIN      
        1 gccgcgcagc aacggtactt tcttcacatc acgctcagcc agcggcacaa aggtttgcgc
       61 cgtatcgagg atatgcgtca atatgtcgcg cggaatccct tcggtcgtga ttagatgggt
      121 caactcgcca tggcgattta gctgaggatt acgcatcacg cctccttggg ctcaatatgc
      181 aacgtgaaat caccatcatc ggatttctcg agcaccaggt tggcagccgg aggcacttca
      241 aaccgccacg ctgcaaagtc ggcgcaaatc ggcaactctc gctgaccgcg gtcaatcaac
      301 acaaccaact tgatcgaggc aggccgtcca taatcaaaca actcgttcat cgccgcacga
      361 atggtgcgcc ctgtgtacag gacgtcatcg accacaatca ggtgccgatc caccacatca
      421 aaccccacat ccgatggctc gacttgtggg tgcaaaccaa tgcggttgaa gtcatcacgg
      481 tagaaactga tgtttaacgt acccagtggc gtggccaacc cgaggtcttg gtgcagtcgc
      541 tcggctagcc aagcgccgcc agaatggatc ccaacgaggt ggacctcgcc agcgggtaac
      601 cgttcgatca gatcggcgac gccttgacgc agcgtttcat acagctgctg tgcttgtggc
      661 agtttcaaat ccgaggcggt catgtttatt gtcctggttc ggtatgtgtt cgcgcatcga
      721 aatacctttg cagaataata gccgctgcaa cagcatcatc ggcggcgtta cctacaattt
      781 cctgcgcttc tagactagag ccacgctcgt caaccaaagt aactggcaat ccataacggc
      841 cctcgagctg attggcaaac cgcttggcct ggcgcgtggc caattgctca cccccaccgg
      901 cggtcaatgg caagccgacc accagggcat ctggctgcca ttgcacgatc agctcctcaa
      961 tgcgtgcgaa acgcttgacc ttctctggcg tgtcaatgat ttctagaggg tgcgcatgcg
     1021 caatcagggc gttgccaagc gccacaccaa tgcggtgagt cccgtagtca aacgccaata
     1081 gagttcgttc atcaggcatg ccctgccgac cctgcgagtt gcgccggatc aacacctagc
     1141 aagcgcatgg cagctgggta gcgtgactca ggtggcatct caaaaatgat cgactcatca
     1201 gcagccacag acaaccaggc gttttgtgcg agttcttgtt cgagctgccc cgccccccaa
     1261 ccggcgtagc cgagcgtgac aaagattttt tctgggcctt ggccgttggc cacggcctga
     1321 agtacatcgc gtgaggtggt cagcgccaaa gtttgtccca acgatatgct cgagctgtaa
     1381 tcacccgcgg gtttatgcaa tacaaaccca cggtccgttt gcacaggccc cccaaaataa
     1441 accggcaaat cttcagccga tgcgcgtgaa gaaccaagcc ctgcttgctg cgctggcttc
     1501 tcttgtggct ggcgagccaa atcctcgacc gactctaggc cagcgtcgac ctcctcgcct
     1561 gtcggcacat cggccacaag gtcagctttt tccagcaaac tagctaggct cagatcaatc
     1621 ggtcggttaa tcaccagccc aagcgcacct cgatccgagt gctcacacac atagatcacg
     1681 gtgccagcca aatctccgtc caccatgccg ggcatggcca tcaggaagtg tccagaaagg
     1741 tcaaccgagg cgctcatgac tgcctcatac ctccatcatc tcaaagtctt ctttgcgagc
     1801 accacactcc gggcagaccc agtttggcgg cacatcctcc catttagtgc ccggtgcgat
     1861 gccctcttct gggcagcctt cggcctcatc atagatccaa ccacaaatca aacacatgta
     1921 tgtacgcatg actaccccga cagttctttt acaatgtagg cgtaatgtta cctaaagtcg
     1981 tgtcccttgc ctgcctcaac ccctcctgct gtgctcagtt ttggtctttt agacccaacc
     2041 gggcgtatag atatcccagc cgatagcatc actgctgcgg catttgaaac acacgcgctg
     2101 tctgtgccgt gtgccacggc tgtcgccgac tcgactggac tgtatgcgct cgagcgtgcc
     2161 aacgccgagt tcatcgatga gcaagcgcgc tacctgctag aagacatgcc aattggcgcc
     2221 atcaaagcgg gtaccgtggt ttgtcctgaa gcggccggcg tcatcgccag cgcggcggca
     2281 gactacagcg atgcgccgct tgtcttgcag ctagggcctc aagaggaccc cgacaccaat
     2341 agcgaccata atacgagggc gtagacgt
//
LOCUS       DATBNL010000231         4289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_12787, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000231 DATBNL010000000
VERSION     DATBNL010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4289
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12787"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VIC30_03755"
     CDS             <1..396
                     /locus_tag="VIC30_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY7803534.1"
                     /translation="CEVRCAKLEARHMTGQRATSEQAMEVFRPGRACWAMLSQFAADD
                     VMTRDDMVILLQDALERNHTKTADRIASLMFDRQTLGQYRAMMKSPAGWLKQYKGNAT
                     GDDAVIAAIALVRQGRSNPSTAARELERT"
     gene            442..1533
                     /locus_tag="VIC30_03760"
     CDS             442..1533
                     /locus_tag="VIC30_03760"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY7803535.1"
                     /translation="MAFQSALDLETRADSWYQMAGNTRLSETGYAWRVRAALRQPIIN
                     WAWVQQAIEWMPPEQQAEIDWQYWRARALAAQGQTDQAQAIYETIGDEYHFYGQLALE
                     EMGQLIVAPDAPSSVTEAELQEARNNPHLQQAVALFKLDLRREAVPQWNYGLRGLNDR
                     QLLAAAEFAREQQIYDRVVNTSERTEQEVDFSQRFIAPFDVQVIEQANSINLDPAWVY
                     GLIRQESRFVMDAKSVVGASGLMQLMPATAKYVARKIGMTDFRPSRVNEFDVNTQLGT
                     NYLSMVLEDLDGSQVLASAGYNAGPGRPKQWRKTLSRPVEGAIFAETIPFTETRDYVK
                     HVLSNATYYATVFTGEPQSLKARLGQITP"
     gene            1577..2734
                     /locus_tag="VIC30_03765"
     CDS             1577..2734
                     /locus_tag="VIC30_03765"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937197.1"
                     /note="catalyzes the addition and repair of the
                     3'-terminal CCA sequence in tRNA; these proteins belong to
                     the CCA-adding enzyme subfamily 2 which does not have
                     phosphohydrolase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEY7803536.1"
                     /translation="MTDAVTDTGSDAAPDTVTDGLEVYVVGGAVRDQLLGRPAGDRDW
                     VVVGSSPQEMTSRGFIPVGADFPVFLHPQTKEEYALARTERKSGKGYKGFTFYDGSDV
                     TLQDDLKRRDLTVNAMAQAPSGELIDPLGGADDLRNHVLRHVGAAFEEDPVRILRLAR
                     FAARFFEFEIASETMTLCKRMVALGEADALVPERVWQEVSRGLMSEKPSRLFEVLSQC
                     DALPVVMPGFVYSERLGQQLDSAATWGERTLPGMYALCMTLTDQRQPLAKRLRAPSDC
                     AQWAELLPAIEQACVASNDWPADEWPEAVLCFLERADAIRRPERLLALLNMASHLVDC
                     PHQRWQDALLAARSIDAGAIARPLQAKGAQVIAAAVRASRLKAIERALNRR"
     gene            2841..3617
                     /gene="xth"
                     /locus_tag="VIC30_03770"
     CDS             2841..3617
                     /gene="xth"
                     /locus_tag="VIC30_03770"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY7803537.1"
                     /translation="MKIATWNINSLKVRLPQVLDWLSTVEPDFVGLQELKLDQDKFPI
                     DAIKEAGYEAVWLGQKTYNGVAILSKTPAQDVVSNIPDNDDPQKRMIAATFETAQGPL
                     RLINVYCPNGQSLESEKYPYKLAWFERLTNWLAREIEKYPNLAIVGDYNIAPTDEDVH
                     DPKRWKNQVLVSPPEREAFERLLALGLTDSFRLFEQPERSFSWWDYRLNGYKRNAGLR
                     IDHVLLTKPLADLCQSCVIDRTPRENEQPSDHAPVMATIG"
     gene            complement(3647..4099)
                     /locus_tag="VIC30_03775"
     CDS             complement(3647..4099)
                     /locus_tag="VIC30_03775"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012837589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY7803538.1"
                     /translation="MAQQQQQRQQRQTQDDYTYFHEIETRWKDNDIYGHVNNVEYYSY
                     FDTAVAAFLISKLGLYFKDSPVIAYVIETGCTYFESLAFPDRVKVGVRIVKLGNSSVR
                     YELAIFKNDGREACAQGHFVHVYVDRASDTPTPIPDDVRAAMQSIAVV"
BASE COUNT          966 a         1091 c         1244 g          988 t
ORIGIN      
        1 tgcgaagttc ggtgcgccaa attagaggcg cgtcacatga ccgggcaacg tgctacttct
       61 gaacaagcca tggaagtgtt ccgacccggc agggcctgct gggcgatgct ttctcagttt
      121 gctgccgacg atgtgatgac ccgcgacgac atggtgatct tgttgcaaga tgcacttgag
      181 cgtaatcaca caaaaaccgc agaccgtatt gctagcttaa tgtttgacag acaaacgctc
      241 ggacaatacc gcgccatgat gaagtccccc gcggggtggt taaagcaata caagggtaac
      301 gccacgggtg atgatgccgt catcgctgcc attgcactgg tgcgtcaagg gcgtagcaac
      361 ccaagtacgg ccgcgcgtga gcttgagcgc acttgaacgg cccgcctgcc gactgcagcc
      421 tcaggctggg cttggtcgca attggcgttt cagtccgcgc tcgatctgga aacccgtgcc
      481 gattcttggt accaaatggc tggcaatacc cggttgtctg aaactggcta cgcctggcgc
      541 gtgcgagcgg cgcttcgcca accgattatt aactgggcgt gggtgcagca ggccattgaa
      601 tggatgccgc ctgagcaaca agccgagatt gattggcagt attggcgtgc cagagccctg
      661 gcggcccaag gtcagactga tcaagcgcag gccatctatg aaaccattgg cgacgagtat
      721 cacttctatg ggcagttagc gctcgaagag atggggcagt tgattgtggc acctgatgcg
      781 ccaagctcgg tgaccgaagc agagctgcaa gaggcgcgaa acaatccgca tttgcagcaa
      841 gcggttgctt tgttcaagtt ggatttacgc cgcgaagcgg tgccgcagtg gaactacggt
      901 ttacgtggac tcaatgatcg gcagttgctg gcagcggcag agtttgcgcg cgagcagcaa
      961 atctacgatc gggtcgtcaa cacctcagag cgcactgagc aagaagtcga tttctcgcag
     1021 cgctttattg cgccgtttga cgtgcaggtc atcgagcagg ccaattcgat caatctcgac
     1081 ccagcctggg tttatggact cattcgtcag gagtcacgat ttgtgatgga tgcgaaatcc
     1141 gtggtgggcg cctcgggtct aatgcagttg atgccggcca cagccaaata cgtcgcccgc
     1201 aaaataggca tgaccgattt ccggccatcg cgggtcaatg agtttgacgt caacacccag
     1261 ctcgggacga actacctgag catggtgctc gaggatctcg atggctcgca ggtgctggcc
     1321 agtgccggtt ataacgctgg gcctggtcgt cccaagcaat ggcgcaagac cttgagtcgg
     1381 ccagttgagg gggcgatatt tgctgaaacc atcccgttta cggagacacg ggactacgta
     1441 aagcacgtgt tgtctaacgc cacgtattac gccacagtat ttactggtga gccacagtct
     1501 ttaaaagccc gactgggtca gatcacacct tagttgtagc tacacagatg ccacgacaga
     1561 tgccgggaca aacaccgtga cagacgccgt aacagatacc ggatctgatg ccgcacctga
     1621 taccgtcact gatggacttg aggtctatgt tgtcgggggc gcggtgcgcg atcaattgct
     1681 ggggcgcccg gcaggcgatc gtgactgggt ggttgtgggc agctcacccc aggagatgac
     1741 gtcgcgtggg ttcatcccgg tcggtgcgga tttccccgtg tttttgcatc cgcaaaccaa
     1801 agaggaatat gcattagcgc gaacggagcg caagtcaggt aaagggtata aggggttcac
     1861 gttctacgat ggctcggacg tgacattgca agacgatctc aagcgccgcg atctgactgt
     1921 caatgccatg gctcaagctc catcaggcga gctcatcgat ccattgggcg gtgccgatga
     1981 tctgcgcaac cacgtgttgc gccatgttgg tgctgccttt gaagaagatc cagtgcgcat
     2041 tctgcgtttg gcgaggtttg cggcgcggtt ttttgagttt gagattgcat ctgaaaccat
     2101 gacgttatgt aagcgcatgg tggcactcgg cgaagccgat gccttagtgc ctgagcgcgt
     2161 ctggcaggaa gtctcgcgtg gtttgatgag tgaaaagcca tctcgtctgt ttgaagttct
     2221 tagccaatgc gatgcactac ccgtggtcat gcctgggttt gtctattcag agcgattggg
     2281 ccagcagtta gatagtgctg ccacatgggg cgagcgaaca ctgcctggca tgtacgcgct
     2341 ttgcatgacc ttgaccgacc aacgtcagcc attggccaag cggctgcgcg cacctagtga
     2401 ttgcgcgcaa tgggctgagc tgctgcccgc cattgagcag gcgtgcgtcg cttcaaacga
     2461 ctggcctgcc gacgagtggc ctgaggcggt attatgtttc ttggaaaggg ctgacgcgat
     2521 tcgacgaccg gaacgtctgt tggcgttgct aaacatggcc agccacttgg tcgattgtcc
     2581 gcaccagcgt tggcaggatg ccttgttggc agcccgatca attgatgcgg gtgcgattgc
     2641 aaggcctttg caagccaagg gtgctcaggt tattgcggcg gcggtgcgcg ctagtaggct
     2701 aaaggccatt gagcgggcgt tgaacaggcg ttaagcgagc gttgagggaa gcattgacaa
     2761 ctgctggaaa gtgctacgtg tagcagcagc ttttagatgg ttctagtaca gtaatggtta
     2821 atcaacattg acaagcccac atgaaaatcg ccacctggaa tatcaattct ctcaaagtac
     2881 gcctgccaca agtgctggac tggctctcaa ccgtagagcc ggattttgtg gggctgcagg
     2941 agcttaagct cgaccaggac aagtttccga tcgatgcgat caaagaggcg ggttacgaag
     3001 ccgtttggct cggtcagaag acttataacg gcgtagcgat cttgtcgaag acccctgcgc
     3061 aagatgtggt gtctaacatc cctgacaatg atgacccaca aaagcggatg atcgctgcca
     3121 ccttcgaaac cgcacaggga ccgctgaggc tgattaacgt ttactgcccc aatggccagt
     3181 cactggaatc agaaaagtac ccgtataagt tggcatggtt tgagcgattg accaactggt
     3241 tggctcgaga gattgagaag tatccgaact tggcgattgt gggtgactac aacattgcac
     3301 ccacggacga agatgtgcat gaccccaaac gctggaaaaa ccaggtgctc gtttcaccgc
     3361 ccgagcgtga ggcgtttgag cgtttgttgg ctttgggtct tacagactct ttccgcttgt
     3421 tcgagcagcc agagagatct tttagctggt gggactatcg tttaaacggc tacaaacgca
     3481 acgcaggttt gcgtattgac cacgtgttgt taaccaaacc tttggccgat ctgtgccaaa
     3541 gttgcgtgat tgatcgtacc ccccgcgaga acgagcaacc ctccgatcat gcgccggtga
     3601 tggccacgat cgggtaggga ttgagtagtc aggttatctg ctacttttag acgacagcaa
     3661 tgctttgcat cgcagcgcgc acatcatctg gtatcggtgt gggcgtgtct gaggcccgat
     3721 caacataaac atgcacaaaa tgcccttgag cacaggcctc gcgtccatcg tttttaaaga
     3781 tcgcgagttc gtagcgcaca ctgctgttgc caagcttgac gatgcgtaca ccaactttga
     3841 cgcggtccgg aaacgccaat gactcaaagt aggtgcagcc agtctcgatg acataggcaa
     3901 tgaccggact gtccttgaaa tacaacccaa gcttggatat caaaaaagca gcgactgcgg
     3961 tatcaaagta agagtagtac tcaacgttgt taacgtgacc atagatgtcg ttgtctttcc
     4021 agcgtgtctc gatctcgtgg aagtacgtgt agtcatcttg tgtttgtcgt tgttgtcgtt
     4081 gctgctgttg ctgtgccacc gtgaccctcc agatatttaa tgtcgaagtt gatatcaaaa
     4141 ttgatgtcaa agttgacggc gtcgatcact ttgagtgaat ccttttagct cgaaatcaag
     4201 ccctcggcca atggccaata ccttgaacaa ttcccccatt tcggcttccg agatcagttt
     4261 atcgattccg cgctgttgct cgctcgcca
//
LOCUS       DATBNL010000232         2455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_92494, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000232 DATBNL010000000
VERSION     DATBNL010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92494"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VIC30_03780"
     CDS             <1..362
                     /locus_tag="VIC30_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014486080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEY7803539.1"
                     /translation="MDAQQLTEEGHYGVFGSAGARTEMPGCSLCMGNQAQVREGATVM
                     STSTRNFPNRLGKGANVYLGSAELAAICSRLGKIPTRQEYMADIGVINDNGDQIYRYL
                     NFDQIEDYKDVADSVNV"
     gene            524..>2455
                     /gene="acnA"
                     /locus_tag="VIC30_03785"
     CDS             524..>2455
                     /gene="acnA"
                     /locus_tag="VIC30_03785"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEY7803540.1"
                     /translation="MAQDPFKTLKSFKIGNKSAQYYSLPALGKKLGIDVAKLPVSIRI
                     VLESVLRNCDGKKVTENHVEELANWKPTGKRSNEIPFVVARVVLQDFTGVPLLADLAA
                     MRDVAKKMGRSADSIEPLVPVDLVVDHSVMIDYFGTKDALDLNMKVEFARNKERYQFM
                     KWGMQAFDTFGVVPPGFGIVHQVNLEYLARGVHHDKKNNVYYPDTLVGTDSHTTMING
                     IGVVGWGVGGIEAEAGMLGQPVYFLTPDVVGVELTGALRGGVTATDLVLTITEMLRKE
                     KVVGKFVEFCGSGTASLSVTDRATIGNMAPEYGATMGFFPVDDKTLDYFRGTGRTDAE
                     IAAFEAYFKAQGMFGVPEGKDIKYTKCLKLDLSKVAPSLAGPKRPQDRIEIGSVAKTF
                     DTLFSKSSAEDGFNQPKDKLEKTFTTSTGTEIHNGDILIAAITSCTNTSNPSVMLAAG
                     LVAKKAVQAGLTVPSYIKTSLAPGSRVVTEYLKKTKLLPYLEKLGFDVAAYGCTTCIG
                     NAGDLTPDLNEVIIDNDLICSAVLSGNRNFEARIHPNIKANFLASPPLVVAYALAGTM
                     RRDLMTEPVGKGKHGDVYLGDIWPTSEEVDELLKFALDAKVFRSNYANVKKNPGKLWE
                     HIKGVKGDLYNWPKSTYIAE"
BASE COUNT          604 a          653 c          659 g          539 t
ORIGIN      
        1 agatggatgc ccaacaactg actgaagaag gccactatgg tgtgttcggt tcggctgggg
       61 ctcgcacaga gatgcccggc tgctcgctgt gcatgggtaa ccaggcccag gtgcgtgaag
      121 gtgccacggt gatgtcaacc agcacccgta acttccccaa ccgtcttggc aagggtgcca
      181 acgtttatct cggctcagct gagcttgctg ctatttgctc gcgtcttggc aagatcccaa
      241 cgcgccaaga gtacatggct gacattggcg taatcaatga caacggtgat cagatctatc
      301 gttacctgaa ctttgatcaa atcgaggact acaaagacgt tgccgatagc gtgaacgtct
      361 aagacctcac tcgcgcttga aacagaccgg tgatcactta acggtctgat taaaaaaccg
      421 ccagcattgc tggcggtttt ttttcttctg gcattgtggt gatgctgcac ggcaagcctt
      481 gcctgttata tgctagaggg gtcaactcgt ggagaacaag accatggcac aagacccttt
      541 caaaaccctg aagtccttca aaatcggcaa caaaagcgcc caatactatt cactgcccgc
      601 gttgggtaaa aaactgggca ttgatgtcgc caagctgccg gtgtcgatcc ggatcgtgct
      661 tgagtctgtg ctgcgcaact gcgacggcaa aaaagttaca gaaaaccacg tcgaagagct
      721 cgccaactgg aaacccaccg gcaaacgctc caacgaaatt ccatttgtgg ttgcacgcgt
      781 ggtgttgcaa gacttcaccg gggtgccgtt actcgctgac ttggctgcca tgcgcgatgt
      841 ggctaaaaaa atgggacgct cggccgactc gattgagccg ctggtacccg tagatttggt
      901 ggttgaccac tccgtcatga ttgactactt cgggaccaag gatgcgctgg acctgaacat
      961 gaaggttgag tttgcgcgca acaaagaacg ctaccagttt atgaaatggg gcatgcaggc
     1021 atttgacacc tttggtgtgg tgccgcccgg tttcggtatc gtgcaccagg tcaaccttga
     1081 atacctggca cgtggcgtgc atcacgacaa aaagaacaat gtctactacc ccgacacgct
     1141 cgtgggcaca gacagccaca ccaccatgat taacggcatc ggcgtggttg gctggggtgt
     1201 gggcggtatt gaagctgaag ccggcatgct cggtcaacct gtgtacttcc tgaccccgga
     1261 tgtggtcggc gttgaattga ctggcgcatt gcgcggtggt gtcaccgcca cggatctggt
     1321 gctaaccatc accgagatgc tgcgcaaaga aaaggtcgtg ggtaagtttg tcgaattctg
     1381 tggatccggc actgccagcc tgtcagtgac cgaccgcgcc acgatcggca acatggcgcc
     1441 cgaatacggt gccacgatgg gctttttccc ggtggacgat aaaaccctcg attatttccg
     1501 tggcacgggc cgcaccgatg ccgagatcgc agcctttgaa gcgtatttca aggcacaagg
     1561 catgtttggt gtgcccgagg gcaaagatat caagtacacc aaatgcttaa agctcgatct
     1621 aagcaaagtc gctccatcgc tcgcgggtcc aaagcggcca caagaccgca ttgagattgg
     1681 cagcgtggcc aagacgtttg acaccctgtt ctccaagtca agtgccgaag atgggtttaa
     1741 ccagcccaaa gacaagctgg agaaaacctt caccacgtca acgggcacag aaattcacaa
     1801 tggcgatatc ttgattgccg cgatcacgtc atgcaccaac acctccaacc ccagtgtgat
     1861 gttggcagca ggcctagtgg caaagaaagc cgtgcaggcc ggcttgaccg taccttcata
     1921 catcaagacc tctctggcac ctggatcgcg agtagtaacc gagtacctga aaaaaaccaa
     1981 actcttgccc tatctcgaga agctgggatt tgatgttgca gcctatggtt gcaccacatg
     2041 tatcggtaac gccggcgact taacgccaga cctcaatgaa gtcattatcg acaatgacct
     2101 catttgttcg gctgtgctgt ctggtaatcg taacttcgaa gcacgtattc atccgaacat
     2161 caaggccaac tttctggcgt cacccccatt ggttgtagcg tatgccttgg ctggcacgat
     2221 gcgccgtgac ctaatgactg agcctgttgg caaaggcaag catggcgatg tctacctcgg
     2281 agacatttgg ccaacatcgg aagaggtcga tgagctgttg aagttcgcac tcgatgccaa
     2341 ggtgttccgc agtaactatg ccaatgtgaa gaaaaatccc ggcaagctgt gggagcacat
     2401 taaaggcgtc aaaggcgatc tctacaactg gcccaagtcg acttacattg ccgaa
//
LOCUS       DATBNL010000233         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_142197, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000233 DATBNL010000000
VERSION     DATBNL010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142197"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..1187)
                     /locus_tag="VIC30_03790"
     CDS             complement(93..1187)
                     /locus_tag="VIC30_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019923935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY7803541.1"
                     /translation="MKNRRTLFQASLACITLAAASALPLAHAQDKDPLKVGFVYVSPI
                     GDAGWTYQHDLGRKQMEEALGDQVTTTYVESVSEGADAERVIREMAASGNDLVFATSF
                     GYMNYVDRVAKQFPNVKFMHATGYKDGPNFHNYNARFYEARYLTGVIAGEMSDSNVLG
                     YVAAFPIPEVLQGINAFTLGAQSVNPDIEVRVIWVNSWYDPGKEREAALALIAQGADV
                     VTHHTDSTAIVQAAEEKGVYAVAYHSDMSKYGEKAHLTAATHHWGDYYTAAAQKALNE
                     DGMVESVWGGVQDGFVDLAPINPAVPQPVQDKVADIKQQIKEGQFHPFTGPIVAQDGT
                     VVLEEGQAMSDADLGQMNYYVKGVSSKLPK"
     gene            complement(1184..>1882)
                     /locus_tag="VIC30_03795"
     CDS             complement(1184..>1882)
                     /locus_tag="VIC30_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017875722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7803542.1"
                     /translation="AVITVHLMANHVATGLAVAIFGVGLAAFLGKPFEARVLPSIKPT
                     ELPWLSDIPVIGPALFGQPWLVYVTWVLFGLVVWFLARTRGGLILKSVGESPEAATAV
                     GIDVVRVRYLAILFGGAMAGLGGAFLSLFHTPMWAEGMVAGKGWIVLALVVFATWRAW
                     RVFFGAYLFGGVMIAQLFVQSSPIPINIPAQLLSALPYLATIVVLILISRNAKMIRLN
                     SPASLGKPFRKESS"
BASE COUNT          483 a          544 c          453 g          402 t
ORIGIN      
        1 cgactggcta tccctgagaa gacaaagccc cgcatcgcgg ggccttgttg ttggactact
       61 gtggctgtga tctcagcagt tcacctgctc tattacttcg gcagctttga actgacgcct
      121 ttgacgtagt agttcatctg acccaaatcg gcatcactca tcgcctggcc ttcttctagc
      181 acgaccgtgc catcttgggc gacgatagga cctgtgaagg gatgaaactg accctcttta
      241 atttgctgct tgatatcagc aaccttgtct tgcacaggtt gcgggacagc tggattaatc
      301 ggggctaagt caacaaaacc gtcttgcaca ccaccccaaa ctgactcgac catgccgtct
      361 tcattgagag ccttctgtgc ggctgccgtg taatagtcac cccagtggtg ggtggctgcg
      421 gtcaggtgcg ccttctcacc atacttggac atgtctgagt ggtaggccac tgcgtacacg
      481 cctttttctt cagcggcctg cacaatagcc gtggagtcgg tgtggtgtgt aaccacatca
      541 gcgccttggg cgatcaaggc taaggccgct tcgcgctctt tgcctgggtc ataccagcta
      601 ttgacccaga taacgcgtac ttcgatgtca ggattcacac tctgggcacc aagcgtaaag
      661 gcgttaatgc cttgcaacac ttcgggaatt gggaaggctg ctacataacc gagcacattg
      721 ctgtcggaca tttcaccagc aatcacaccc gtcaaatagc gtgcttcgta aaaacgcgcg
      781 ttgtagttgt gaaaattggg gccatctttg tagccagtgg catgcatgaa cttaacgtta
      841 ggaaactgct tagcgacacg gtcgacgtag ttcatgtagc caaagcttgt ggcaaacacc
      901 aagtcattac cactggctgc catttcacgg atcacacgct cagcatcagc gccttcagac
      961 acactctcca cgtacgtggt agtaacttgg tcaccgagtg cctcttccat ttgcttgcga
     1021 ccgaggtcat gttgataagt ccaaccggca tcaccgatgg gactgacgta gacaaagcca
     1081 actttcaacg ggtccttgtc ttgcgcatga gccagtggca acgcgctagc agcagctagg
     1141 gtgatgcagg ccaatgaggc ctgaaataaa gtacgacggt ttttcatgaa ctttcctttc
     1201 taaaaggttt gccaagagaa gcgggagaat taagtctgat catctttgcg ttgcgtgaaa
     1261 tcagtatcag caccacaatc gttgcaaggt aaggcagtgc agagagcaat tgcgctggaa
     1321 tattgatggg tatcggcgag gactgcacaa acaattgcgc aatcatgacg cccccaaaca
     1381 agtacgcccc aaaaaacacc cgccaggctc gccaagtggc aaacaccacc agcgccaaca
     1441 caatccaacc cttgcccgca accatgccct cggcccacat gggcgtgtga aagagcgaca
     1501 aaaacgcccc acccagcccg gccatggctc caccaaacaa aatcgcgaga taacgcacac
     1561 gcacgacatc aattcccacc gctgttgccg cctcgggtga ctcaccaact gatttcagaa
     1621 ttaacccacc gcgcgtgcgt gctagaaacc aaaccaccaa tccaaacaat acccatgtca
     1681 catagaccag ccaaggttgc ccaaacagag ctgggccaat gacgggtata tcagacaacc
     1741 acggcaattc agtgggctta attgacggca agacacgagc ttcgaagggt ttacccaaaa
     1801 acgccgcaag ccccacccca aaaatcgcca ccgccaatcc agtcgccaca tggttggcca
     1861 tcaaatgaac cgtgatcacg gc
//
LOCUS       DATBNL010000234         4768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_132360, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000234 DATBNL010000000
VERSION     DATBNL010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4768
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132360"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VIC30_03800"
     CDS             <1..331
                     /locus_tag="VIC30_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803543.1"
                     /translation="NSGAPLMTVYFLCCRIGKEQFVGAQATFLLIQNILKFIPLTLLG
                     LLHLGNATAALVLMPLTFFGSWLGQRFYKQATESLFFAVYVILLVLGFVASVLLIIGR
                     QTVLGWL"
     gene            570..2462
                     /locus_tag="VIC30_03805"
     CDS             570..2462
                     /locus_tag="VIC30_03805"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY7803544.1"
                     /translation="MSKSKDTAKDTTKDTVNLGKRNLLLGTATLGATAATGLLSTKGA
                     QAASAATATTTSGAGAVIRRVRPGEPGWPSKAQWQALAQSMQGKVFEVPDPFAGCEQS
                     AAACNEILTKFENPYYIQDTPGATQSSGWVDAWTSRVSQYAAEVETTEDVAKAVRFAH
                     DNNLRLVVKGGAHSYLGQSNAPDSFLIWTKRLDKIEMHDQFVPQGSQGVAPIEAVSVG
                     GGAIWVDVYDKAVVKGRRYVQGGGCTSVGVGGHLQTGGFGSFSKRFGMSSGGMVEVEM
                     VLADGSVVVANEHQNSDLFWASRGAGAAFGIITRATLKLLPLPETFGFAGLRVKAKSD
                     GAYTALVEHFLRFYRDSLMNPHWGEHAGFNGDNELEIAMSIQGLSEAQAAEVWQPFID
                     WVSARGDDYEIKAPLRLVVIPAYHWWDYEYRKKHLPKSIIADDRPDGKPGAFWWSGSA
                     REVSIYIAGYESGWLHERLLDDSQVSALAMTLVAASRVRGFEIHFNKGLAGAPPEVAR
                     QGQEIPMNPVVQHAFGLVIVAGGELNVHEGLRGHEPNKPEARAEAARIGQAMDLIRAI
                     APDAGGYCSEMSYFAPNWQYDAWGRANYARLHALKQKYDPTGVFMAHHYVGSEDWGDH
                     GFVKLG"
     gene            2538..3524
                     /locus_tag="VIC30_03810"
     CDS             2538..3524
                     /locus_tag="VIC30_03810"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015013398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family oxidoreductase"
                     /protein_id="HEY7803545.1"
                     /translation="MFNAIVDHKDDNGYRAELTAVDEAQLPEGDVTVDVSYSGLNYKD
                     GLAITGKGPVVRKFPMVPGIDLVGTVRQSSHADCQAGDAVILNGWGVGETHWGGLAQT
                     ARLKGDWLVPLPKDMSARDAAAIGTAGYTAMLCVMALQRHGVNPEQGEIVVTGAAGGV
                     GSVAIALLAKLGYEVVAVTGRASEADYLKQLGAALIMDRAELSEPGKPLAKERWAGAV
                     DVVGSHTLANICASTRYRGVVTACGLAGGMDLPATVAPFILRGITLAGIDSVMCPKPD
                     RTLAWQRLAAELDLAKLHAMVQEIGLGEVIETAGQLMQGQVRGRVVVDVNRT"
     gene            3648..>4768
                     /locus_tag="VIC30_03815"
     CDS             3648..>4768
                     /locus_tag="VIC30_03815"
                     /inference="COORDINATES: protein motif:HMM:NF044596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803546.1"
                     /translation="MSDPNANANPPSTHRIASHQEPIAKPIAKPIAKPIDTPITERID
                     WLFDLAARHGQAWRSSDAALARQRYLSQHTTAVVALKCMDGRINIPVATNTPTGIVMP
                     FRNLGGMFNLGWPHLGEVLQHHVMEMMGQGRRVVILITYHYSAGDPKRGCAGFGFNKQ
                     ASIDHAWEIRKQVSHIFGQSHDSVYPLVCGFETDEDAITLHAHRDGPTLNLADCAGIS
                     ESDMAARVASLLPDMAEVMRRDLLPLLMGNLDHIAQIRQQNLRQQRLLDIEHREWMIC
                     LGRGFDWLHTPNLALIIGPYSPDLAHPIRTAADIIAGNMAAGRIPDDGFLLLASVPFD
                     TIGVDRARAELKAQFLSRFASTVISEHLPELAAKMHTKTA"
BASE COUNT          979 a         1230 c         1453 g         1106 t
ORIGIN      
        1 caattcgggt gcgccgctga tgaccgtgta ttttttgtgt tgccgtattg gcaaagagca
       61 gttcgtaggc gcacaagcca cgtttttgct catacaaaat atcctcaaat tcatcccgct
      121 aaccctgctc ggtttgttgc accttggcaa cgccaccgcc gcactggtcc tcatgccgct
      181 gacgtttttt gggagttggc tagggcagcg tttttacaaa caagccaccg agagtctgtt
      241 ttttgcggtg tatgtgattc tgctggtact cgggtttgtg gccagtgtgt tgcttattat
      301 tggccgtcag acggttttgg gctggttgtg agaggacgat tctcgggttg gcgctgatgc
      361 gtttatagcc cctaaaaaca acgagccacg ctagacaaaa ccactccaag tgacgtatgg
      421 tcactaaatc cgtgtttcat tatttacgct gcgctaagcg cgttgcctta tctcgttgcg
      481 tgatctatgt ggtgttatct gcgccgcttt aactacgcca cgttatcgtt tctatggatg
      541 tttgtttcaa aatactgttg gggagcctta tgtctaagtc caaagacacc gctaaagaca
      601 ccacgaaaga caccgtcaat ttaggtaagc gcaatttgtt gctcggcact gccacgctcg
      661 gggcaacggc ggccaccggt ttgctgtcta ccaagggcgc acaagctgcc agcgcagcga
      721 cagcgacaac aacgtctggt gcaggtgccg tgattcgtcg tgtgcgccct ggcgagccag
      781 ggtggccgag taaagcgcag tggcaggcat tggctcagtc gatgcaaggc aaggtatttg
      841 aagtgccgga tccctttgcc ggttgtgagc aaagtgccgc ggcctgcaac gagatcctca
      901 ccaagtttga gaatccctac tacatccagg acacaccggg tgctacgcaa agcagtggct
      961 gggttgatgc ctggacgagc cgcgtcagtc aatacgctgc tgaagttgaa accaccgagg
     1021 atgttgctaa agcggtgcgt tttgcgcatg acaacaacct gcgtttggtg gtcaaaggtg
     1081 gcgcccacag ttacttgggt caatccaatg cgccggattc ttttctgatc tggaccaagc
     1141 ggttggataa gatcgagatg cacgatcaat tcgttccgca aggcagccag ggcgtggcgc
     1201 ccattgaagc ggtatcggtc ggtggcggtg ccatctgggt agatgtttac gacaaggctg
     1261 tggttaaagg caggcgttat gtgcaaggtg gcggttgcac ctcagtgggt gtgggcggtc
     1321 atctgcaaac cggtggcttc ggtagtttct ccaagcggtt tggcatgagc tcaggcggca
     1381 tggtagaagt ggagatggtt ctggccgatg gcagtgtggt ggtggccaac gaacaccaga
     1441 acagcgatct gttttgggcg tcacgtggcg ccggtgcagc atttggcatc atcacgcgcg
     1501 ccacgctaaa gctacttcca ttgccagaga catttggttt tgcggggttg cgtgtcaaag
     1561 ctaaatctga cggtgcttac acggcactgg ttgagcattt cctgcgcttc tatcgtgatt
     1621 cgctaatgaa cccgcactgg ggtgagcatg ccggctttaa tggtgacaat gaacttgaga
     1681 tcgcgatgtc gatccagggc ttgtctgagg cgcaggccgc tgaagtttgg caacccttca
     1741 ttgactgggt cagtgcgcgt ggcgatgact atgagatcaa agccccgctc cgactggtgg
     1801 tgattccggc ctatcactgg tgggactacg agtaccgtaa aaagcacttg cccaagtcga
     1861 tcatcgccga cgatcggccc gatggcaaac cgggtgcgtt ttggtggtca ggtagcgcac
     1921 gcgaagtcag catttatatc gccggctacg agtcgggttg gttgcatgag cgcttgctcg
     1981 atgacagcca agtgtctgcc ttagccatga cattggtggc ggcctcacgc gtacgcgggt
     2041 ttgaaattca cttcaacaaa gggctggcgg gcgcaccgcc cgaggtggcc cgtcagggtc
     2101 aggaaatccc gatgaaccct gtggtgcaac atgcctttgg tctggtcatt gtggctggtg
     2161 gcgagttgaa tgtgcacgag ggtctgcgtg gccatgagcc gaacaagccc gaagcacgtg
     2221 ctgaagctgc gcgtatcggc caggccatgg acttgattcg tgccatcgcg ccagatgccg
     2281 gtggctattg ctccgagatg agttatttcg cgcccaactg gcaatacgac gcctgggggc
     2341 gggccaacta cgcacggctg catgccctaa aacaaaagta cgacccaacc ggtgtgttca
     2401 tggcgcacca ctacgttggc agcgaagact ggggcgatca cggctttgtg aagctcggtt
     2461 gatgtcgagc tgttgatggc gagcggttga tttcagttag catggggttt tgattgatag
     2521 ccaactagga gggcctcatg tttaacgcca tcgtcgatca taaagacgat aacggttacc
     2581 gcgccgaact cacagccgtc gatgaagcac agttgcccga gggtgacgtc accgttgacg
     2641 ttagctattc cggcttgaac tacaaagacg gcttggccat caccggcaaa gggcctgtgg
     2701 tgcgcaagtt ccccatggtg ccaggtatcg accttgtcgg taccgtacgc caaagcagtc
     2761 acgcggactg tcaggccggc gatgcggtga ttctcaatgg ctggggtgtg ggcgagacgc
     2821 attggggtgg tttagcgcaa acagccagac tcaagggtga ctggttggtg ccgctgccta
     2881 aggacatgtc agcacgcgat gcggctgcta ttggaactgc gggctatacc gccatgctgt
     2941 gtgtcatggc tttgcaacgc catggtgtca accctgaaca aggtgagatt gtggtgaccg
     3001 gtgctgcagg cggtgtcggc agcgtggcca tcgcgctact ggccaaactc ggttatgagg
     3061 tggttgccgt tactgggcgt gccagtgagg cggactatct gaagcaactc ggcgcggcat
     3121 tgatcatgga tcgagccgaa ttgtccgagc ctggcaaacc cttggccaag gagcgctggg
     3181 ccggtgccgt tgacgtggtg ggcagtcata cgttggcgaa tatttgtgct tcaacccgct
     3241 atcgtggtgt ggtcactgcc tgtggcttgg ccggcggtat ggatttgccg gcaacggtgg
     3301 ctccctttat cctgcgcggg attaccttag ctggtattga cagtgtcatg tgcccaaagc
     3361 cagatcgaac gcttgcctgg caacgtttgg ccgctgaact tgatcttgca aagttgcatg
     3421 ccatggttca ggaaatcggg ctcggtgaag tcattgagac cgccgggcaa ctgatgcaag
     3481 gacaggtgcg tgggcgtgtg gtggtcgatg tgaaccgtac ctaggaaacg aggcacctag
     3541 gatttaggga tggcgagcgc agggctaggg cagggctagg gcagggctag ggcagggcta
     3601 gggcaaacca tattgcggtt ggttgtaaaa agccgtaagt tctgagcatg tctgacccta
     3661 acgccaacgc caacccaccg agcacgcatc ggattgcatc gcaccaagag ccgattgcga
     3721 aacctattgc caagcccata gccaagccca ttgacacgcc cattaccgag cgcattgatt
     3781 ggctctttga tctcgcggca cgccacgggc aggcttggcg cagttcggat gcggcgctcg
     3841 cgcgccaacg ttatttaagc cagcacacca ctgccgtggt ggcactcaaa tgcatggatg
     3901 gtcgcatcaa cattccggtg gccacgaaca cgccaacagg cattgtgatg ccgtttcgaa
     3961 acctcggtgg catgtttaat ttgggttggc cgcacttggg tgaggtgctg cagcatcacg
     4021 tcatggagat gatgggccaa ggtcgtcgcg tggtgatact gatcacttac cactactcag
     4081 ccggagaccc caagcgcggg tgtgccgggt ttggatttaa caaacaagcc agcattgatc
     4141 atgcctggga aattcgcaag caggtttcac atatttttgg gcagtcacac gactcggtat
     4201 atccgttggt ctgtggcttt gaaaccgacg aagacgccat caccttgcat gcccaccgtg
     4261 acggtcccac cctgaacctg gctgactgcg ctggcatcag tgaatcggat atggcggctc
     4321 gggtggctag cttgctgcct gacatggcag aggtgatgcg ccgcgacttg ttgccactgc
     4381 tgatgggtaa cctcgatcac attgcccaaa tacgccaaca aaaccttcgc cagcagcgct
     4441 tgctcgatat cgagcacagg gaatggatga tttgcttggg gcgcggcttt gactggttac
     4501 acacgcctaa cctggccttg atcattgggc cttacagccc ggatctggct caccccatcc
     4561 gtacagctgc tgacatcatt gccggcaata tggctgcagg tcgcattccc gatgatgggt
     4621 ttctattgtt ggcgtctgtg ccgtttgaca ccatcggtgt ggaccgggcg cgcgctgaac
     4681 tcaaggcaca gtttctgtcc agatttgcct cgacggtcat cagcgagcat ttgccggaac
     4741 tcgcggccaa gatgcacacc aagaccgc
//
LOCUS       DATBNL010000235         1797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_171848, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000235 DATBNL010000000
VERSION     DATBNL010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171848"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..943)
                     /gene="hslU"
                     /locus_tag="VIC30_03820"
     CDS             complement(<1..943)
                     /gene="hslU"
                     /locus_tag="VIC30_03820"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017685724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEY7803547.1"
                     /translation="MTANTMTPKEIVSELDKHIIGQHAAKKAVAVALRNRWRRQQVPE
                     ALRHEIHPKNILMIGPTGVGKTEIARRLAKLASAPFIKIEATKFTEVGYVGRDVDTII
                     RDLAEMAIKQTREHAMKQVQTQAEDAAEDRILDVLIAPPRNADGTPIREDSTARQTFR
                     KRLREGALDDTEIEIEVNAPVPQMDIMGPPGMEDMAEQLKGMFAGLAREKKKARKMKI
                     KEAFKQLVEEEAAKRVNDENLKTDAVRLVEQHGIVFLDEVDKIASRQEGSSGEVSRQG
                     VQRDLLPLVEGPTVTTKYGMIRTDHILFIASGAFHLSR"
     gene            complement(954..1487)
                     /gene="hslV"
                     /locus_tag="VIC30_03825"
     CDS             complement(954..1487)
                     /gene="hslV"
                     /locus_tag="VIC30_03825"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEY7803548.1"
                     /translation="MEQFHATTIVCVRRGNRVAMGGDGQVTLGNIVIKGTARKIRRLY
                     HDKVLAGFAGATADAFTLQERFEGKLEKHQGHLMRAAVELSRDWRTDRILRRLEAMLI
                     VADHEHTLVLTGNGDVLEPENGLAAIGSGGAYAQSAALALLRHTEIAPEEIVKSALSI
                     AGDLCIYTNQEHAIEVL"
     gene            complement(1567..>1797)
                     /locus_tag="VIC30_03830"
     CDS             complement(1567..>1797)
                     /locus_tag="VIC30_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010100883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HEY7803549.1"
                     /translation="ATIEEEHALELRTRDRERKLLKKVQQSLMRIESGEYGWCEETGE
                     PIGVARLLARPTATLSLEAQERREMRQKMFGD"
BASE COUNT          327 a          501 c          505 g          464 t
ORIGIN      
        1 gccgtgacag atgaaacgca cccgaagcaa tgaacaaaat gtggtcggtg cgaatcatgc
       61 cgtatttggt ggtgactgtc gggccttcta cgaggggcag caggtcacgt tgcacacctt
      121 gccgggagac ctcaccgctg ctgccttctt ggcgtgaggc gattttgtcg acctcatcga
      181 gaaacacgat gccgtgctgt tcaacgagcc tgactgcatc ggttttaagg ttttcatcgt
      241 tgacgcgttt ggccgcttct tcttcgacga gttgcttaaa cgcttctttg attttcatct
      301 tgcgcgcttt tttcttctcg cgcgccagcc cggcaaacat gccctttagc tgctcggcca
      361 tgtcttccat gccgggcggg cccatgatgt ccatctgtgg cacgggtgca ttgacttcaa
      421 tttcgatttc ggtatcgtca agtgcccctt cgcgcaaacg tttgcgaaac gtctgacgcg
      481 cggtggagtc ctcgcgaata ggtgtgccat cggcgttgcg tggtggcgca attagcacgt
      541 cgaggattcg gtcttcagcg gcgtcctcgg cctgggtttg aacctgcttc atggcgtgtt
      601 cgcgggtttg tttgatggcc atctccgcga ggtcacggat gatggtatcg acatcacgcc
      661 cgacatagcc gacttcggtg aacttggtgg cttcaatttt gatgaaaggc gcacttgcca
      721 gtttggctaa ccgacgggcg atttcagtct tacccacgcc ggtggggcca atcatcagaa
      781 tgtttttggg gtggatttcg tggcgcagtg cttcaggcac ctgctggcgg cgccagcgat
      841 tgcgcaacgc caccgccacg gccttcttgg ccgcatgctg gccgatgatg tgtttgtcta
      901 gctcagagac aatctctttg ggtgtcatgg tgttggctgt catggcctgt gcctcacaaa
      961 acttcgatcg cgtgttcttg attggtgtag atgcaaaggt caccggcaat gctcagtgcc
     1021 gacttcacaa tctcttctgg ggctatctcg gtgtggcgta acagtgctag tgccgcggac
     1081 tgtgcataag cgccaccaga gccgatggct gctaggccgt tttctggttc gagcacgtca
     1141 ccgttgccgg tcagcaccag tgtgtgctcg tggtcagcaa caatcagcat ggcctctaac
     1201 cgacgcaaaa tccggtcagt acgccagtcg cgtgacaact caacggctgc gcgcatcagg
     1261 tggccctggt gcttctccaa tttgccttca aatcgctctt gtagtgtaaa ggcatcagca
     1321 gtagcgcctg caaacccggc gagtactttg tcatgataga gacgtcggat ctttcgggcc
     1381 gtgcccttga tcacaatatt acctagggtg acctgaccgt caccgcccat ggcgacgcgg
     1441 ttgccgcgcc gcacgcagac aatggtcgtt gcgtgaaatt gttccataac tgcctttgga
     1501 tggttgcacg gagtcgggcg cggccgcccc gtgttgacta actaaacgtg cgacttaatc
     1561 accgaactaa tcgccgaaca ttttttggcg catctcgcga cgttcctgtg cttcaagcga
     1621 tagcgtagca gttggccggg ccaacaagcg ggctaccccg ataggttctc cggtttcttc
     1681 gcaccagccg tactcacctg actcaatgcg catgagtgat tgctgtactt tcttcagtaa
     1741 cttacgctca cggtcgcgtg tgcgcaattc aagcgcatgt tcctcttcaa tcgttgc
//
LOCUS       DATBNL010000236         1660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_122540, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000236 DATBNL010000000
VERSION     DATBNL010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122540"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VIC30_03835"
     CDS             complement(<1..589)
                     /locus_tag="VIC30_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEY7803550.1"
                     /translation="MLGLEDLIHTIVLFALPVVFAITLHEAAHGYVARLFGDPTATLA
                     GRVTLNPTKHIDPVGTIAVPLGILLMSKLFGGPPLLFGWAKPVPVDFGRLKNPKRDML
                     WVALAGPGANLLMAILWAMSVRFLLEAGAGRESFWFQMAVIGIQINLVLMALNLLPLL
                     PLDGGRVLYSLLPHQLAWQYGRLEPYGLMILIVLLL"
     gene            complement(600..1223)
                     /locus_tag="VIC30_03840"
     CDS             complement(600..1223)
                     /locus_tag="VIC30_03840"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEY7803551.1"
                     /translation="MSEFFSVHPTNPQPRLMNQAAELIASGGVLAIPTDSGYALVAHL
                     DDKQAADALRRFRGLDSRHHLTLLCRDLSEIGQFAKVDNQQYRLLKQATPGPWTFILQ
                     ASKEVPKRVSHPSRKTIGIRVPNHPVVSALLELVEAPVLATTLILPDQEAPLVDPEDV
                     REAFGKQLAGVIDAGRCPWQPTTIVDLSGATPEVLRRGAGDPADIGL"
     gene            1300..1376
                     /locus_tag="VIC30_03845"
     tRNA            1300..1376
                     /locus_tag="VIC30_03845"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1334..1336,aa:Arg,seq:tct)
     gene            complement(1443..1518)
                     /locus_tag="VIC30_03850"
     tRNA            complement(1443..1518)
                     /locus_tag="VIC30_03850"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1483..1485),aa:Arg,seq:cct)
     gene            complement(1546..>1660)
                     /locus_tag="VIC30_03855"
     CDS             complement(1546..>1660)
                     /locus_tag="VIC30_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006410310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY7803552.1"
                     /translation="RVVQLLLGHADISTTQIYTHVARERLKRLHAQHHPRG"
BASE COUNT          403 a          488 c          449 g          320 t
ORIGIN      
        1 tgagcaacag cacaatcaga atcatcagac cgtaaggctc aagccgtccg tactgccagg
       61 ccagctggtg tggcagcagg ctatagagca cgcgcccccc gtctaacggc aatagcggca
      121 acaggttcaa cgccatgagc acaagattga tctggattcc aatcactgcc atctgaaacc
      181 agaagctctc gcgcccggca ccagcttcca gcagaaatcg caccgacatg gcccacagga
      241 tggccatcaa caaattcgcc cccggcccag ctagcgcaac ccatagcatg tcgcgtttag
      301 gattcttgag ccttccgaaa tccactggca cgggcttggc ccaaccaaac aacaacggtg
      361 gaccaccaaa cagctttgac atcaacaaga tcccaagggg tacggcaatg gtgcccaccg
      421 ggtcaatgtg cttggtcggg tttaaggtga cgcgcccggc tagcgtggcc gtcgggtcac
      481 cgaataagcg tgccacgtaa ccgtgggcgg cctcgtgcag cgtaatggca aacaccaccg
      541 gcagcgcaaa caacacaatg gtgtgaatca gatcttctag cccaagcatg ttggttgcct
      601 cataaaccga tgtcggccgg atcaccggca ccgcgacgca acacctcagg tgtggcaccg
      661 gataaatcca cgatggtggt gggctgccaa ggacagcggc ccgcatcaat gacgcctgcc
      721 agttgcttgc caaacgcctc gcgcacatct tctgggtcca ccagtggcgc ctcttggtct
      781 ggaaggatca gtgtggtggc caacacaggc gcctctacca gctcaagcaa agcgctcacg
      841 accggatggt tcggcacacg gataccgatg gttttacgtg acggatgcga cacgcgcttg
      901 ggcacctctt tagaggcttg caagatgaat gtccaaggcc caggtgttgc ctgcttaagc
      961 aaacggtatt gttgattgtc gactttggcg aattgcccga tttctgacag atcacgacac
     1021 aacaaggtca aatggtgacg agaatcaagc ccccgaaagc gccgcaatgc gtcagccgcc
     1081 tgtttgtcat caaggtgcgc aaccaacgca taacccgaat ctgttggtat tgctaacaca
     1141 ccacccgagg cgatgagttc agcggcctga ttcatcagcc ggggctgcgg attagttggg
     1201 tgtaccgaaa aaaactcact catggctatc accaagacgt taatgactca aagcctacca
     1261 cagcgagcgt ttgatacaac agttaaacta tcgctcgcgg tccccgtagc tcaactggat
     1321 agagcacccg ccttctaagc gggtggttgc gtgttcgagt cacgccgggg gcgccaccgc
     1381 catcaaaaaa agacgagggc cgtctttggt gcctcgccat gtccacgccg aatatcgaga
     1441 aatggcgccg ccggcacgat tcgaacgtgc gactcccttc ttaggaggaa ggtactctat
     1501 cccctgagtt acggcggcgt aagtcgcagt ttagcaattt cgcggctagc ctcgcggatg
     1561 atgctgggca tgcaaacgct ttaagcgctc tcgagccacg tgggtgtaga tttgcgttgt
     1621 ggaaatatcg gcatgcccaa gtaatagctg gacaaccctc
//
LOCUS       DATBNL010000237         2018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_162283, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000237 DATBNL010000000
VERSION     DATBNL010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162283"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VIC30_03860"
     CDS             complement(<1..552)
                     /locus_tag="VIC30_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009553606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY7803553.1"
                     /translation="MNAKEIAQRLQQTGYVADENLADMVWMGLTIDRPILLEGEAGVG
                     KTAIAQASATALNRPLFRLQCHESLDLNQSVYEWNYSRQLLEIRLREAEGAGQSELRD
                     DLFTEAFLLQRPLMQAITSAEPAVLLIDEIDRADESFEAYLLEVLGEYQISIPELGTI
                     RASSRPLVVLTSNGTRDLSDALRR"
     gene            complement(570..1247)
                     /locus_tag="VIC30_03865"
     CDS             complement(570..1247)
                     /locus_tag="VIC30_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019429894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY7803554.1"
                     /translation="MEVTIDKQYPIPASDKACWQVLSNITELATCMPGAAITEQVDDT
                     HYKGTVKVKVGPATASFAGDIEVLGVDEQARQIRLLGKGADKGGSSASMELTATIETV
                     DENNVTLTGKADVIVNGKFAQFGGRMMTSVSDMILKQFADNFSVKAQAAASAAAPAGA
                     ATSGGDVGTAGAEQSASHSADSGASAKTVTTKATEAPKMQTELNGLAIAWMLVKNFFA
                     RLFGKKT"
     gene            complement(1292..>2018)
                     /locus_tag="VIC30_03870"
     CDS             complement(1292..>2018)
                     /locus_tag="VIC30_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019429895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY7803555.1"
                     /translation="SRSTPVAGAAIAMASRKIHAKAKKIAASLLEVSEEDLEWEVDRF
                     KVRGNDDKFKTMKDISWAAYNQPPQGLEPGLEAVHYYDPPNFTYPFGIYLAVLDIDRA
                     TGETSVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQLLSFDAQGNIQGNSLM
                     DYFLPTAVETPHWETDHTVTPSPHHPIGAKGVAESPHVGSIPTFTAAIVDAFSHVGVT
                     HIDMPHTSYRVWKELKKHNLSLN"
BASE COUNT          482 a          577 c          492 g          467 t
ORIGIN      
        1 gcggcgaagc gcatcagaca aatcacgcgt gccattactt gtgagcacca ctagtggtcg
       61 actgcttgct cggatcgtac ccaattcagg aatagaaatt tgatactcac caagcacttc
      121 aagcaggtaa gcctcaaacg attcatcagc ccgatcgatt tcgtcaatca gtaagaccgc
      181 cggttcagct gatgtgatgg cttgcatcaa agggcgctgc aacaaaaacg cctcagtaaa
      241 caaatcatca cgcaactcag actgaccggc accttcagcc tcacgcaaac gaatctccag
      301 cagttgcctg ctgtagttcc actcatacac tgactgattc aagtccaggc tttcatggca
      361 ctgcaaacga aacagcggac gattcaaggc cgtggcgctc gcctgcgcaa tcgcagtctt
      421 accgaccccg gcctcgcctt ctaacaaaat gggccgatcg atcgtcagac ccatccacac
      481 catatcggca aggttctcat cagccacata gcccgtttgc tgcaggcgct gtgcgatctc
      541 tttggcgttc atgacaacct gtctagcatt tacgttttct taccgaataa ccgtgcaaag
      601 aaattcttca ccagcatcca ggcaatggcc aatccattga gctcggtctg catcttgggt
      661 gcctcagttg ccttagtcgt cactgtcttg gcagatgcgc ccgaatcagc ggaatgcgaa
      721 gccgactgct cagcaccagc tgtaccgaca tcaccaccgc ttgtggccgc gcctgcgggc
      781 gcagcggcag aagcggcagc ctgagctttt accgaaaagt tatctgcaaa ctgcttgaga
      841 atcatgtcag agaccgacgt catcatccga ccaccaaact gcgcaaactt gccattgaca
      901 atcacatcgg ccttgccagt caaggtcacg ttgttctcat caacggtctc aatggttgca
      961 gtcaactcca tggaggcaga cgaaccacct ttgtcagcgc ctttaccaag cagacgaatc
     1021 tgtctggcct gctcatcaac accgagcact tcgatgtcgc cagcaaagga cgccgtggcc
     1081 ggccctactt tgactttgac cgtgcccttg tagtgggtgt catcaacctg ctcagtgatg
     1141 gcagcaccag gcatgcaggt agccagctcg gtgatgtttg acaacacctg ccagcaagct
     1201 ttatcgctgg caggtatcgg atactgcttg tcaatcgtga cttccattca aattccctgt
     1261 tatttactgt tgtcacttga gcaaaacgtg atcagttaag acttaggttg tgctttttaa
     1321 gctctttcca aacgcgatat gacgtgtgtg gcatgtctat gtgcgttaca ccaacgtgcg
     1381 agaacgcatc aacaatagcc gccgtaaacg ttggaatact acccacgtga ggtgattcag
     1441 ccacgccttt ggcaccaatc ggatggtgag gcgatggtgt aaccgtatgg tcagtctccc
     1501 agtgcggggt ctcaactgcg gttggcagga agtaatccat caacgaattg ccttggatat
     1561 tgccttgggc gtcaaacgac agcaactgac ccatcgccac ggcaaaccct tcggtcaacc
     1621 caccgtggat ctggccttcg ataatcatcg ggttaatccg tgtgccgcag tcatcgagcg
     1681 catagaaacg acgcacagag gtctcgcccg tggcccggtc aatatccaag accgctagat
     1741 aaataccaaa cggataggta aagttcggtg ggtcgtaata gtgaacggct tcaagaccag
     1801 gttctaggcc ttgtggtggc tggttataag ccgcccaaga gatgtccttc atggttttga
     1861 acttgtcatc gttgccgcgc accttaaagc gatcgacttc ccactcaaga tcctcttcgc
     1921 tgacctccag caaggacgct gcaatcttct tggccttggc gtggattttg cgcgatgcca
     1981 tggcaatggc ggcaccggcc accggtgttg agcgtgag
//
LOCUS       DATBNL010000238         1767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52726, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000238 DATBNL010000000
VERSION     DATBNL010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52726"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VIC30_03875"
     CDS             <1..360
                     /locus_tag="VIC30_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7803556.1"
                     /translation="TGERGVLINTASVAAYDGQIGQAAYAASKAAVVGMTLPIARDMA
                     SQGIRCVTIAPGIFGTPMIFGMPQNVQDSLAASIPFPSRLGRPEDYAKLVHQVVTNDM
                     INGETIRLDGAIRMPPK"
     gene            357..>1767
                     /gene="murJ"
                     /locus_tag="VIC30_03880"
     CDS             357..>1767
                     /gene="murJ"
                     /locus_tag="VIC30_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEY7803557.1"
                     /translation="MSLFRAAATVSSLTLLSRITGLARDIIIARTFGASALTDAFWVA
                     FRIPNLLRRLFAEGAFTQAFVPILAQVKQTSEDQATVRQTVDRVAMALFSVLSLITLV
                     GVIGAPLVVLAIASGMGTADRATEFDAAVWMTRVMFPYIICMSLVSFASGVLNTWKRF
                     AIPAVTPVLLNLAMIGSSIWLSSYVSQPIYALALGVMIGGVAQLAVQWWAIGRLGLRP
                     RLTNPKQAFADSTVRRVMRQMVPATLGVSVAQISILINTNIATWLTPGSVTWLSFADR
                     LMEFPTALIGVALGTVLLPTLSKAHADQAHDDYSRLLGWGIRLVFVMGLPAALTMIVL
                     ADGLVATLFQYGAFDASDVYQTQLAVMAYAVGLLGLLLVKILAPGFYGKQDIKTPVKI
                     AVMVLILTQLFNLILVPSLAHAGLALAIGLGACVNALALYIGLRRRNLYRPQPGWLPF
                     IGKLGLGLAVMAAALIFMAG"
BASE COUNT          332 a          477 c          494 g          464 t
ORIGIN      
        1 acgggtgaac gtggtgtgtt gatcaacacc gcctcagtag cagcttatga cggtcagatc
       61 ggccaagccg cctatgccgc gtccaaagcc gctgtggttg gcatgacatt accgattgcg
      121 cgcgatatgg cctcacaagg cattcgttgc gtgaccattg cgcctggaat ttttggtacg
      181 cccatgatct ttggtatgcc acaaaacgtt caggactcat tggccgccag catccccttc
      241 ccctcgcgcc ttggccgccc agaagattat gccaagctgg tgcatcaggt agtgaccaac
      301 gacatgatca acggtgaaac cattcgcctc gatggcgcca tccgtatgcc accgaaatga
      361 gtctgtttag agccgcggcc accgtcagca gcttaacgct gctgtcacgt atcaccggcc
      421 tggctcgaga catcatcatt gctcgcacct ttggtgcgag cgctttaacc gacgctttct
      481 gggtggcatt tcgtataccc aatcttttgc gtcgcctgtt tgccgaaggc gctttcacac
      541 aagcctttgt tcccatcctg gcacaggtca agcaaaccag cgaagatcaa gcgaccgtgc
      601 gccagacggt tgaccgagtg gccatggcgc tgttttccgt gctcagcctc atcacgctgg
      661 ttggtgtgat tggcgcacca ctcgtggttt tagcgattgc cagcggcatg ggaaccgctg
      721 accgcgccac agaatttgat gccgcggttt ggatgacgcg cgtgatgttt ccttacatta
      781 tttgcatgtc acttgtgtct tttgcttcgg gtgtgctcaa cacctggaag cgcttcgcca
      841 ttcctgccgt caccccagtc ttgctaaacc tcgccatgat tggctcgagc atctggctat
      901 ctagctatgt cagccaaccc atctacgcgc tggcgttggg tgtgatgatt ggcggtgttg
      961 cgcaactcgc tgtgcaatgg tgggcgattg gccgactcgg gcttagacca aggctgacga
     1021 accccaaaca agcttttgct gacagtaccg tcagacgtgt catgcgacaa atggtgccgg
     1081 ccacgctagg cgtatcggtg gcgcaaattt cgattctgat taacaccaat atcgcgactt
     1141 ggctcacgcc tggtagcgtc acttggttgt cgtttgctga ccgactcatg gagtttccaa
     1201 cagcactgat tggtgtggcg cttggcaccg tgctgttacc gaccttatca aaagcgcatg
     1261 ctgaccaagc ccatgacgac tacagccgac tgcttggctg gggcattcgg ttagtctttg
     1321 tcatggggct gccagcggcg ctgaccatga tcgtgttggc cgatggtctg gtggcaacgt
     1381 tgtttcagta cggtgcgttt gatgctagtg atgtttacca gacccagttg gctgtcatgg
     1441 cctatgctgt cggactttta ggtctgttgc tggtcaagat tttggcgcca ggcttttatg
     1501 gcaagcaaga tatcaaaaca ccggtcaaga ttgcggtgat ggtgctgatt ctgacgcagc
     1561 tctttaacct gattctggtg ccatcactgg ctcatgctgg tttggcgctg gcaatcggac
     1621 ttggtgcgtg tgtcaatgct ttggccttat atattgggct gcgtcgccgc aatctgtatc
     1681 gacctcagcc gggctggcta ccttttatag gcaaacttgg cttaggcttg gcagtgatgg
     1741 cggcagcatt gatttttatg gcggggg
//
LOCUS       DATBNL010000239         4643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_12864, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000239 DATBNL010000000
VERSION     DATBNL010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4643
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12864"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..563
                     /gene="coaD"
                     /locus_tag="VIC30_03885"
     CDS             57..563
                     /gene="coaD"
                     /locus_tag="VIC30_03885"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEY7803558.1"
                     /translation="MITAIYPGTFDPLTRGHEDLVRRAASLFDEVVVGVAHSRAKKPF
                     FTVQERVEIAREVLGHYPNVRVESFAGLLKDFVRDQGGRVIVRGLRAVSDIEYEFQMA
                     GMNRHLLPEVETLFMTPSDQYQFISGTIVREIALLGGDVSKFVFPSVERWLQAKSKER
                     LEQSWPHG"
     gene            611..874
                     /locus_tag="VIC30_03890"
     CDS             611..874
                     /locus_tag="VIC30_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018443644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEY7803559.1"
                     /translation="MALRITDECINCDVCEPECPNDAISMGEAFYVIDPSSCTECVGH
                     FDEPQCQVVCPVECIELHPEFKEGQETLMAKYRDLTAKKAATA"
     gene            complement(942..1310)
                     /locus_tag="VIC30_03895"
     CDS             complement(942..1310)
                     /locus_tag="VIC30_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803560.1"
                     /translation="MELIVGCTPTSHEDAVRFAQRWFLVDAQDRFCSHAHQQKLLGVQ
                     IDVSHGNLVLRAPGMLRLDIPMDVIEDDDGVCREVTVGGQTVKVVDEGDLPAVWFGNV
                     IGTPCRLVKVHPDESVPKFE"
     gene            complement(1342..2322)
                     /locus_tag="VIC30_03900"
     CDS             complement(1342..2322)
                     /locus_tag="VIC30_03900"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY7803561.1"
                     /translation="MRFLLRALLVVVATLLLLLVAVFLLLPTSLGTSFVEDRLRNSVH
                     PQLQINGQVSLSVMPRLGLSLTDVTVPSGQGAYPLVSVSQAQWQLAWLPLLSDRWVFE
                     TIYLQGIQVYRSQPTWQPLIDEFDGFQWVHDGRWWPAPSEHSVDSGAWHVVIKQALVE
                     DVSVITGDQIDQPLPVVTLKQAQFTADGRWPVADGSQATFGLRELSVNDADELGHMPA
                     LLEQLGISEDNAWDVLALDSQWQMGSDALQLVELQASGPWGEMSAKEGKMDIPSGAMV
                     IPVKAVLTNAPKLKTRGLRVNVRRSTLQFELTGTVSEPGVQWLTPQKTTP"
     gene            complement(2344..3192)
                     /locus_tag="VIC30_03905"
     CDS             complement(2344..3192)
                     /locus_tag="VIC30_03905"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY7803562.1"
                     /translation="MGEFSAQWLSLREPVDHAARSQHVCRAMLQDLRQRKGQTLNGVR
                     VLDLGCGSGSNLRALAPLLGENQHWTLVDYDDDLLKAASQALQDWAQAVISVDGQTLV
                     LRQSGFTMTVILRRADLSQDLSALMALPVDLVTASALFDLVSSKWVDQFAAALQAPLY
                     AVLSFDGQMSWEPEHGLDAAVVQAFCAHQQQDKGFGQALGPNSGSYLARALGAQGFEV
                     TCDKSPWDIQSLPSAFHDMLIDGIASAATDIGGIEPVALDQWLQSRRVAQRCIIGHDD
                     LYATKN"
     gene            complement(3185..>4643)
                     /locus_tag="VIC30_03910"
     CDS             complement(3185..>4643)
                     /locus_tag="VIC30_03910"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803563.1"
                     /translation="FEHVLQLPAHHAQTQHSGRLMKVMLQGTDALWMIWLGFLRDYFA
                     AFVAIVVLMPVAFYLNAAMASLLLVLSLLFVVLTRLVLQKTDQLQQAAEGHFSDMAEH
                     VADSLGNVALIQSFARVQNEVTTLRNLSHRVVGAQFPALSWWAIVNVLTRSATTLTVL
                     AMLSLGLWLFSLQRISIGEIVTFIGFSGLIIGRLEQSVSFANRLSVEAPKLREFFEVL
                     AVAPEVKEIDGAIAVGRLSGAIEFQSVSYTYPGAARAAVSEVSFNVAPGQTVALVGPS
                     GAGKSTTLALLCRFYDPTQGQILLDGHRLQDLELTALRKNVGVVFQETFLFNRSVADN
                     LLVGQPDASMASLQQAASDACALEFIEALPQGFDTPVGERGRFLSGGQRQRLAIARVL
                     LKNPAIVVLDEATSSLDAQTEQLVQQAMRRVRQGRTTLVIAHRLSTIRDADQIIYIEQ
                     GRVLEHGSFETLVAQQGRFARMLATQFEQQEKAGG"
BASE COUNT         1177 a         1359 c         1125 g          982 t
ORIGIN      
        1 cgtcaagggc gtgccggtgc cgtacactac caactgttac agcgtcgcga aacctcatga
       61 ttactgctat ttatcctgga acatttgatc cattgacccg tggccacgaa gacttggtca
      121 gacgggccgc gagcctattt gatgaagtgg tggttggtgt ggcccatagc cgcgccaaaa
      181 aacccttctt caccgtgcaa gaacgggttg aaattgcccg cgaagtgctc ggccattacc
      241 ccaacgtacg ggtggagagc tttgcaggat tgcttaaaga ctttgtgcgt gatcagggcg
      301 gtcgggtcat tgtgcgcggg ctacgcgctg tatcggacat tgagtacgag tttcagatgg
      361 ctgggatgaa ccgccacttg ctccctgagg tcgaaacttt atttatgaca ccatcggacc
      421 aataccaatt tatttccggt acgatcgtgc gggaaatcgc gctgctaggt ggcgatgtga
      481 gtaaatttgt gtttccctcg gttgaacgtt ggttgcaagc caagtccaaa gaacgactcg
      541 aacaatcctg gccgcatggc taggcaaaca cccagctagc ctgcgacatg aggctaaagg
      601 tcaaaacgcc atggcgctgc gaattaccga tgaatgcatt aactgcgacg tctgcgagcc
      661 tgagtgcccc aacgatgcca tatcaatggg cgaggcgttt tacgttatcg acccgtcgtc
      721 ttgcaccgaa tgtgttgggc actttgatga gcctcagtgt caggtggttt gtcccgtgga
      781 atgcatcgag ttgcaccccg aattcaagga aggccaagaa acacttatgg ctaagtatcg
      841 tgacctgacc gctaaaaaag cggcgacagc ataggtcttt aactaagctg ttaaaacctc
      901 tgtcaccgct aaattgccta gcattactta aactagtcaa attactcaaa tttcggcact
      961 gattcatcgg gatggacttt gaccagtcgg cacggtgtac caatgacgtt accaaaccac
     1021 accgcgggta ggtcaccttc atcgaccacc ttaacggttt gtccacccac ggtcacttcg
     1081 cgacagacgc catcgtcatc ctcaatcaca tccatgggaa tatctagacg aagcatgccc
     1141 ggggcgcgta acaccaggtt gccatggctg acgtctatct gtaccccgag cagcttttgt
     1201 tggtgcgcat gactacaaaa gcgatcctgc gcatccacta aaaaccagcg ttgagcaaat
     1261 cgcaccgcat cctcgtggct tgtcggtgtg catcctacaa tcagttccat tggtttcatc
     1321 atcaaagtat gtgttggttt tctagggtgt cgttttttgt ggtgttagcc actgcacccc
     1381 gggttcagac acggttcccg tgagttcaaa ctgcagcgtc gaccgacgaa cgttgactcg
     1441 caatccgcgg gtctttagtt tcggtgcgtt ggtcagtacg gccttcacgg gtatcaccat
     1501 cgctcccgaa ggaatatcca tcttgccttc ttttgctgac atctcacccc acggaccact
     1561 ggcctgcagt tctaccaact gcaacgcatc agaacccatt tgccactgac tatcgagtgc
     1621 gagcacatcc caggcattat cttcagatat accgagctgc tcaagcagcg ctggcatgtg
     1681 gccaagctca tcagcatcgt tgaccgacaa ctcacgcaac ccaaaggtag cttgactgcc
     1741 atcggcaaca ggccaacgac cgtcggcggt gaattgcgcc tgcttaagcg tcactaccgg
     1801 taatggctga tcaatttgat cgccggttat cacagagaca tcttcaacca gagcctgctt
     1861 gatcaccacg tgccaagcac ccgagtctac cgaatgttct gacggtgctg gccaccagcg
     1921 accatcatgt acccactgga aaccatcaaa ctcgtcaatc agaggctgcc aagttggttg
     1981 cgaacgatac acctgaatac cttgcagata gatcgtctca aacacccatc gatcagacaa
     2041 caatggcaac catgccaact gccactgcgc ctggctaacc gaaaccaacg gataagcacc
     2101 ctgcccgctt ggaacagtca catcagtaag cgacaagccc agtctaggca tcacgcttaa
     2161 gctgacctgc ccattgattt gcagctgcgg gtgcaccgag tttctaagac gatcctcaac
     2221 aaaggatgtg cccagtgagg tcggtagcaa caaaaagact gcaaccagca ataacaacag
     2281 agtggccaca acaaccagca atgctcgcaa taaaaaacgc atcagggccg atccaagtca
     2341 aatttagttt ttagtggcat acagatcatc atgaccgatg atgcatcgtt gtgcaactcg
     2401 tcggctttgc aaccattgat cgagggcaac cggttcgata ccaccaatgt ccgtggctgc
     2461 cgatgctatg ccatcgatca acatgtcatg aaaggccgac ggcaaggatt ggatatccca
     2521 cgggcttttg tcgcaggtca cctcaaagcc ctgagcgcct agcgcccgag ccaagtaact
     2581 acccgagttt ggccccaatg cttgcccaaa gcctttgtct tgctgttggt gtgcacaaaa
     2641 cgcctgcacc accgcggcat cgagtccgtg ttctggctcc caactcatct gcccatcaaa
     2701 actcaacacc gcatacaacg gggcttgcag ggcagcagca aactgatcca cccattttga
     2761 tgacaccaga tcaaacaacg cggaggccgt caccaaatca accggcaagg ccatcagcgc
     2821 tgaaaggtct tgagacaaat cggcacgccg taatatcacg gtcatggtga acccggactg
     2881 ccgcagcacc aacgtctgcc catcgacgct gatcaccgct tgagcccagt cttgcaaggc
     2941 ttgactcgcc gctttaagta aatcatcgtc gtaatcgacc aacgtccagt gctgattctc
     3001 accgagcaag ggtgccaacg ctcgcaaatt cgaccctgaa ccgcaaccca aatcaagcac
     3061 ccgaacacca ttaagtgtct gacccttgcg ctgacgcaaa tcctgcaaca tggcccgaca
     3121 aacatgctgg ctacgcgcgg catgatcgac cggctctctt aggctaagcc actgcgccga
     3181 gaattcaccc acctgctttc tcctgttgtt caaactgcgt ggccagcata cgggcaaatc
     3241 gaccctgctg tgccacaagc gtctcaaacg agccgtgttc aagcacccgt ccttgttcaa
     3301 tgtaaataat ctgatcggca tcacgaatcg tcgacagccg gtgcgcaatc accaacgtgg
     3361 ttcggccttg cctgacccgg cgcatggcct gttgcactaa ctgctcggtc tgtgcgtcaa
     3421 gtgagctcgt ggcttcgtct agcaccacaa tggccggatt tttaagcaac acacgggcaa
     3481 tcgctaaccg ttggcgctgc ccacccgaca aaaaccgacc acgctcaccg acgggcgtat
     3541 caaagccttg tggcaaggct tcaataaact caagtgcaca ggcgtcactt gcagcttgct
     3601 gcaacgaggc catcgatgcg tcgggctggc ccacaagcag attgtctgcc acgctgcgat
     3661 taaagagaaa ggtttcttga aacaccacac cgacgttttt gcgtagggcc gtgagctcta
     3721 agtcctgcag gcgatgacca tcgagcagaa tctggccctg cgtcgggtca taaaaacggc
     3781 acagcaacgc caatgtcgtt gatttgccag cacctgaggg ccccacgagc gccaccgtct
     3841 gaccaggtgc cacattaaaa ctgacctcag agaccgccgc gcgggcagca cccggatagg
     3901 tatatgagac agactgaaac tcaatggctc ccgacagacg tccgaccgcg atcgcaccgt
     3961 cgatttcttt cacctctggg gccacggcaa gcacctcaaa aaactctctg agcttgggtg
     4021 cctcaaccga caagcgattc gcaaaactaa cggattgttc cagtcgcccg atgatgagcc
     4081 ctgagaatcc gataaaggtc acaatctcgc ctatcgagat tcgctgcaga ctaaataacc
     4141 acagcccaag agacagcatg gccaagacgg ttaacgtggt cgccgagcgt gtcaggacat
     4201 tgacgatggc ccaccacgaa agcgcgggaa actgcgcacc caccacacgg tgactgaggt
     4261 tgcgaagtgt ggttacctcg ttttgaacac gagcgaaact ttgaatcagt gccacgttac
     4321 ccaagctgtc agccacatgc tcggccatgt cagaaaaatg tccttcagcg gcctgctgta
     4381 gttgatcagt tttttgaagc acgagtcggg tcagcacaac gaacaacaga cttaacacca
     4441 acaaaagact cgccatggcc gcattcaaat aaaacgccac cggcatcaac accacaatgg
     4501 ccacaaacgc agcaaaataa tcccgcaaaa aacccagcca aatcatccac aacgcgtccg
     4561 tgccttgcag catgactttc atgagacgcc ctgaatgttg cgtttgcgca tggtgggctg
     4621 gcaactgtaa gacgtgttcg aag
//
LOCUS       DATBNL010000240         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_112440, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000240 DATBNL010000000
VERSION     DATBNL010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112440"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..761)
                     /locus_tag="VIC30_03915"
     CDS             complement(<1..761)
                     /locus_tag="VIC30_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEY7803564.1"
                     /translation="MSKTTAASARSGRAARSSRNVRNGPSPLQLRLLSFLREARWVLF
                     ALLAAWLALVLVTWSPADPGWSHSASQTLLSNGGGVLGAYTADILYYLLGFSAWWLVV
                     LLLHRVYAGYRRLVHHLRAQDDQTLERVKWEQGVGFGLVLAGSVGLESLRLGSWGQML
                     PSHTELVSGAGGVIGYAWSSFLNTAVGFTGSTLILIALLVIGLGLFFGFSWLTVCERV
                     GTWIEMGVLKVYRAYQARVDRRAGEAASAERHEHV"
     gene            1033..1992
                     /gene="trxB"
                     /locus_tag="VIC30_03920"
     CDS             1033..1992
                     /gene="trxB"
                     /locus_tag="VIC30_03920"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEY7803565.1"
                     /translation="MSDTKHAKVLILGSGPAGYTAAVYAARANLNPVLVTGLAQGGQL
                     MTTTEVDNWPADAQGVQGPDLMQRFQEHAERFETELIFDQIEKVDLSKRPFTLFGDGG
                     KTYTCDALIIATGASAKYLGLPSEEAFMGRGVSGCATCDGFFYRDQDVVVVGGGNTAV
                     EEALYLSNICKTVTVVHRRDKFRAEPIMIDKLMDKAQNGNVKLAVHRELDEVLGDQSG
                     VTGVRLRSTTGESPVEMPVTGVFIAIGHSPNTGIFEGQVDMENGYIVTRSGLKGLATM
                     TSVPGVFAAGDVQDHVYRQAITSAGTGCMAALDAQRWLENEPA"
BASE COUNT          476 a          602 c          517 g          402 t
ORIGIN      
        1 tcaacatgct cgtggcgctc agcagaggcc gcttcaccgg cgcgtcgatc gacacgtgcc
       61 tggtaggccc gatatacctt caaaacaccc atctctatcc aggtgccgac tcgctcacag
      121 acagtcaacc aagagaaccc aaaaaacaat cccagcccaa tcaccagcag cgcgatcaga
      181 atcaaggtgc tgcccgtaaa cccgaccgcc gtattcagaa aggatgacca agcatatccg
      241 atgaccccac ccgcaccact gacgagttct gtgtggcttg gcagcatctg gccccatgaa
      301 ccaagtctga gcgactctaa gccgaccgag cctgccagca ccagcccaaa gcccacgccc
      361 tgctcccact tcacgcgctc aagcgtctga tcgtcctggg cacgcaagtg gtggaccaga
      421 cgccggtagc cggcatagac gcggtgcagt aacaacacca ccaaccacca tgcagaaaac
      481 cccagcaagt agtagagaat gtcagccgta taggcaccaa gcacaccgcc gccgttgcta
      541 agcaatgtct gtgaggccga atgcgaccaa ccagggtcag ccgggctcca ggtgaccagc
      601 accaacgcca gccaagccgc gagcaatgca aacaataccc agcgggcctc gcgcagaaat
      661 gacaacagcc gcagctgtag cggtgacggt ccattacgca cgttgcgtga actacgggcg
      721 gcgcgtcctg atcgcgcaga agcagcagtg gtttttgaca tggacgagat tatagtttga
      781 acaatagtta gaaatttatt aatatatatt tatcttaact aaatacggca tatcttgcga
      841 cagcacgttt ctaaaccggc gttttcggcg caaaggatgt ctgtctttac aataagggtt
      901 agtcattgcc gttttagttg atgtcgcaat gccatacgcg ccatgcgcgg cgctcagtcg
      961 cccgtgctat ctgccggaac cggttcacct tcgtttttat cttcgtttta tctaccttgc
     1021 gagcttttaa ccatgtctga caccaaacac gccaaagttc ttattctcgg ttccggcccg
     1081 gccggctaca cagccgccgt ctatgctgca cgggccaacc tgaatccagt gcttgtcacc
     1141 ggtctggcac aaggtgggca gttaatgaca accaccgaag tcgacaactg gccagccgat
     1201 gcccaaggcg tacaaggccc ggacttgatg cagcggtttc aggaacatgc cgagcgcttt
     1261 gagaccgaac tgatatttga tcaaatcgag aaagtcgatt tgtccaagcg ccccttcacg
     1321 ttgtttggcg atggcggtaa aacttacacc tgcgatgccc tgattatcgc caccggcgcc
     1381 tcagccaaat acttgggtct gccctcggaa gaggctttca tgggtcgcgg cgtatcgggc
     1441 tgcgccacct gcgatggttt cttctaccgc gaccaagatg ttgtcgtcgt cggtggcggc
     1501 aataccgcgg ttgaggaagc cctgtatttg tccaacatct gcaagaccgt caccgtggtc
     1561 catcgccgcg acaagttccg tgctgaaccc atcatgatcg acaaactgat ggacaaagca
     1621 caaaacggta acgtcaaact tgccgtgcat cgtgaactcg atgaagtgct cggtgatcaa
     1681 agcggcgtca ccggtgtgcg cctgcgcagt accactggcg agtcgcccgt tgagatgcct
     1741 gtgaccggcg tgttcattgc gattggtcac agcccaaaca ccggtatttt tgaaggccag
     1801 gttgacatgg aaaacggcta catcgtcacg cgtagcggcc taaaaggctt ggccaccatg
     1861 acctccgtgc cgggcgtgtt tgccgccggc gatgtccaag accacgttta tcgtcaagcc
     1921 atcaccagcg cgggcaccgg ctgcatggca gcgcttgacg cacaacgctg gctcgagaat
     1981 gagccggctt aaacagc
//
LOCUS       DATBNL010000241         1781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_191770, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000241 DATBNL010000000
VERSION     DATBNL010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191770"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /locus_tag="VIC30_03925"
     CDS             complement(<1..846)
                     /locus_tag="VIC30_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7803566.1"
                     /translation="MSDIALSAQDRVSARSALRRRKLVAFLFVAPLLAFLVFAFVAPI
                     ASMLFRSIHEPTVSELIPDTLQKMQTWDGQEMPPPEVMNQFAVDLKRLAKDRTSGQLA
                     GEINRSMPGASSVIKSSARQMRRADDAKLATAGAQALFDANERWQEVEIWRSIQDAGQ
                     PYRIDQYLTALDLQKNPLDGSIEARDGPKIYVDLYTKTLRIALIITLLTIALGYPLSY
                     YLAGLPDRTANMLIVFVLLPFWTSLLVRTTSWIALLQTNGVINSTLMWAGIIGEPMEM
                     LYTEFA"
     gene            complement(987..>1781)
                     /locus_tag="VIC30_03930"
     CDS             complement(987..>1781)
                     /locus_tag="VIC30_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY7803567.1"
                     /translation="ERACSEGLLEEIPRDILPPGADGTPATEDFVPAALASECGVGVI
                     VWTIIYAYNNDTIGANKPQTVADLFNTQKFPGKRAFRKRPQVNMEWALMADGVAPADV
                     YKVLATEEGQKRAFAKLDTIKDDIVWFDSWSQAPQLLNDGGAVMVQSANGRIFSAMKE
                     DNKPFNIVWDSHVYDLDVWAIVKGSQKKDLALEFIAYATQSKPLAGMADVAYGPTRKS
                     SAAFVDASVTPDLPTSHIDKGIKADGIFWADYGESLGEKFNEWLLK"
BASE COUNT          416 a          450 c          495 g          420 t
ORIGIN      
        1 cgcaaactcg gtatagagca tctccatcgg ttccccgatg ataccggccc acatcagtgt
       61 ggaattgatc acgccattgg tttgcagtaa tgcaatccag gacgtggtgc gtaccagcaa
      121 cgatgtccaa aagggcagca acacaaacac aatcagcatg ttggctgtcc tatctggcaa
      181 cccggccaag tagtaggaca atggatagcc tagggcaatg gtcaataacg tgatgatcag
      241 cgcaatgcgc aaggtcttgg tgtaaagatc gacatagatt tttgggccat cacgggcctc
      301 gatcgagcca tctagtggat ttttttgcag atccagcgcg gtcaagtatt gatcgatgcg
      361 atagggttgg cccgcatctt ggatgctgcg ccagatttca acttcttgcc agcgctcgtt
      421 ggcatcaaac agggcttgtg cgccggcagt ggcgagtttg gcgtcatcgg cgcgacgcat
      481 ctgtctagcg cttgatttaa tgacgctgct ggcgccgggc atggagcgat tgatttctcc
      541 agccaattgg ccagaggttc tatctttagc cagacgtttg aggtctacgg cgaactggtt
      601 catgacctct ggtggtggca tttcctgacc atcccatgtt tgcatttttt gcagggtgtc
      661 agggatcagt tcagacactg tcggctcatg aatactgcga aacaacatcg aagcgatggg
      721 tgccacaaat gcaaaaacca aaaaagccag cagtggcgca acaaacagaa aggccacgag
      781 cttgcggcgg cgcagggcgg acctagcact gactcggtct tgcgcggata gggcgatatc
      841 gctcatagat ttgggtatag actcattaca actgaatgaa gtggttgtgg ctgttgccac
      901 aaccacttca agcgatttac ttcaaacaat atgtgtcgcg cgactcaggt cgaacgaccc
      961 aggacgaatg acacatatcg aacaacttac ttcaacaacc actcgttgaa cttttcacca
     1021 agtgactcac cgtagtcggc ccagaaaatg ccgtctgcct tgatgccctt gtcgatgtgc
     1081 gaagtgggca ggtcaggcgt cacggacgca tccacgaacg cagcagatga ctttcgggtt
     1141 gggccgtaag caacgtcggc catgccagcc aagggcttgg actgtgtggc ataggcgatg
     1201 aactcgagtg ccaggtcttt cttctgggaa cctttaacga tggcccagac gtcgaggtca
     1261 tagacgtggc tgtcccaaac gatgttgaaa ggcttgttgt cttccttcat ggcgctaaag
     1321 atacgaccat tggcagactg aaccatgaca gccccgccat cgttgagcag ttgtggtgct
     1381 tgcgaccagc tgtcaaacca gacgatgtcg tctttgatgg tgtcgagctt ggcgaatgca
     1441 cgcttttgac cttcttcggt tgccagtact ttgtagacgt cggcgggtgc aacaccgtca
     1501 gccatcaatg cccattccat gttgacttgt ggacgcttac ggaaagcgcg cttgccaggg
     1561 aatttctgag tattaaagag gtcagcgacg gtttggggct tgttggcacc aatggtgtcg
     1621 ttgttgtaag cgtaaatgat ggtccagaca atcacaccca caccgcattc acttgcgagc
     1681 gcggcaggca cgaagtcttc tgtggctggt gtgccatcag cacctggtgg caggatgtca
     1741 cgtggaattt cttcgagcag gccctcagag caagcacgct c
//
LOCUS       DATBNL010000242         8226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_171879, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000242 DATBNL010000000
VERSION     DATBNL010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 8226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8226
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171879"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..555)
                     /locus_tag="VIC30_03935"
     CDS             complement(301..555)
                     /locus_tag="VIC30_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803568.1"
                     /translation="MMNHNVRLDDVESSLDPVSNHQYRFSVFSRCLSLFAVVVFLSGC
                     STAVAVADAVGSAAVYTVKTVVNTVDAVTPDIVNGDDDDD"
     gene            complement(796..1509)
                     /locus_tag="VIC30_03940"
     CDS             complement(796..1509)
                     /locus_tag="VIC30_03940"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEY7803569.1"
                     /translation="MIGVIGGMGPLATADFMQKVIAATSAEHDEQHVPVLISSDPRIP
                     RRPAALLDGAQSPLPRLVEIRDRLIVAGATALVMPCNTAHYWHRELAAGTSVPFPSIV
                     EVTCDDVVSKTRDHDRVGLVATQATLVTGLFQDALDRRHRTTVSPSEEITRQCMLPAI
                     ALVKAGKVSQASELMRETVEHLLQMGATSVILACTEAPIAMSFFPELVDQYCIDSTEA
                     LAVATVQLWEQQKSLDASV"
     gene            complement(1577..3202)
                     /locus_tag="VIC30_03945"
     CDS             complement(1577..3202)
                     /locus_tag="VIC30_03945"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEY7803570.1"
                     /translation="MSVSSNPGLSMVNVYDTIIEGGSVIDGTGADAYYSDIGIKDDRI
                     AAIGDLSSAQAAVRHDCRGLTVAPGFIDIHTHSDYTLLVDGRADSQICQGVTTEVIGQ
                     CGFSCAPLKRAAGARAVIGYVELGMDVTWRTFGEYLDRLEQARPAVNVAAFVGHGAIH
                     RAVMGDDAKAPSESDLSAMVKLTEQAFDDGAKGLSTGLEYWPGSDAPIQEIEALTAVA
                     AKRGGLYATHVRNRDVYYDLGFTEAVATARHAGAKLQISHIQPKFGAPSQAMQHTLEL
                     LYRAKREGVDVAYDIIPHDWSHTVMVSVLPAWAREGGATQTLARLKDPVERERMKRNP
                     RPIWRLVTERRWDDIVLLKSRVNADLIGLSFAQIGQQRGVDPYDAVLDILLEEGQDMA
                     AVMWTSRSFSDDDVCMCLRETDSMVMSDTLALTDRGPLNGTIGSLSGYGWTARLLGHY
                     VRDRNIISLPEAVAKITSKPADRIGLIDRGRIRAGALADIVVFDATVLQDRSSFLMPR
                     RHPDGITHVWVNGIQVVHQGQRNDEQPGRVLRD"
     gene            complement(3199..4209)
                     /locus_tag="VIC30_03950"
     CDS             complement(3199..4209)
                     /locus_tag="VIC30_03950"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HEY7803571.1"
                     /translation="MKLSKFPRVRITHGPTAIEPMHRLTEALGGPNLWIKRDDCTGLA
                     TGGNKTRKLEYLMADAQQQGADTIITQGATQSNHARQTVAIAAKMGMRCYIILEDRTG
                     YQFEDYRDSGNVFLDHLYGAHVSEVPADTDMNAAMADLATDLKGQGLKPYIIPGGGSN
                     AIGALGYVTCALELMDQANNMGLQIDSLVHATGSAGTQAGLVAGLYGSRSQIPVYGVG
                     VRVPQAAQEGKVFELAQQTADLLGLPGSVAREDVVANCDYVGEGYGRPTPGMIEAVTM
                     LARLEGILLDPVYSGKGMAGLIDLCRKGHFKKGQNVVFLHTGGAVGLYGYMHAFQGLE
                     PV"
     gene            complement(4244..5461)
                     /locus_tag="VIC30_03955"
     CDS             complement(4244..5461)
                     /locus_tag="VIC30_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY7803572.1"
                     /translation="MNTQTDPHLDLTAQEPIPTAGVEAALALMQSGKLHRYGEVGAKP
                     SEASMLEVEFAKEVGAKYCVAMNSCGSTMFVALKAAGVKPGDKVLSNCFTLAPVPGAI
                     AHVGALPVLVDITDDLVIDMDDLERKAKQSGAKVLLLSHMRGHICDMQVLAEFCTRHD
                     ITLIEDCAHTMGAAWDGHWTGRWGKAGCFSLQSYKHANSGEGGLLVTDDEDIAAQAVL
                     LSGSYMLYRAHVSRPDDSVFERWEYITPNFSLRMSNLAAALARPQFGLVLADRGNRWN
                     QRYSWIAEGLSGAPGLRLPHRPAKEQYIASSIQFVLEGMSSAQISAVIDRCAKEGVHI
                     KWFGADAPIGFTSVWRHWQFFGEPQVLPNADRILQGLCDVRIPLTLTQEQCRYIADVI
                     KRSLETEPKHLSV"
     gene            complement(5466..6788)
                     /gene="hisD"
                     /locus_tag="VIC30_03960"
     CDS             complement(5466..6788)
                     /gene="hisD"
                     /locus_tag="VIC30_03960"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY7803573.1"
                     /translation="MAIEYLKKANPPVAQIDTATAQTVSSMLAEIEAGGEEVVKRYAR
                     ELDGYEGEIVLGPTHFADAEKALSEGVKSDIQFAHQRIVDFAKRQRDSMQEFTAELLP
                     GLTVGQRLIPCQTAGCYVPGGRYAHAASALMSVATAKVAGVDHIVATSPATKDHGVHP
                     GILYAMKLSGADTVLALGGVHAVASLAYGLFSGHEADIIVGPGNRFVAEAKRMLFGRV
                     GIDVVAGPTESAVIADDTADPAVVTADLIGQAEHGPDSPVWLFTTSRRVAQEVIRLAP
                     SVIESLPDLAKKSATAAWRDYAEVIVCDTPEEVVRISDKYASEHLQVMAEDLDWWLSN
                     LRNYGSLFLGEETTVAYGDKCSGPNHILPTKGAARYSGGLSVGKFIKTVTWQRLDRSA
                     SKVVGQVAARISRLEGMEGHARTGDVRLHKYYPAESFDLGSLDGHRSH"
     gene            complement(6872..7921)
                     /locus_tag="VIC30_03965"
     CDS             complement(6872..7921)
                     /locus_tag="VIC30_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803574.1"
                     /translation="MKNTYRKLTAVALVALSATAVQAQELQEVRISSQPALLGSVPFA
                     LANEKGWWADLGLKVTITDFPAGAPQIAASRSWDVGYTGSVPAVLGAVRFDLDTIAFS
                     DDQSATNALYVNGSDADAFIANPSSIKGGTIFLTGNSTVDLAARSCLAKFGLGKDDVT
                     VRSMGQSEIIAGMSSGNVNIGGLWAPNTYTVEEKAGGKYLCSGKDTGTMVPGNMVVRA
                     DWGEQNPELVAKFLAVYLRGQSYMKANRAEALAIMKKHYDQGGVVISEAAMNKELDLR
                     PMYSLSEQLELFNSSAGPSMADKTMNTIAEFMKEVGSLRADEPLPEASTYVTDKYLKI
                     VENTPELKAFANSTN"
     gene            complement(7969..>8226)
                     /locus_tag="VIC30_03970"
     CDS             complement(7969..>8226)
                     /locus_tag="VIC30_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803575.1"
                     /translation="GRANPRTVMFITHAVEEAVYLADRVVVMTRRPGTIKQVIDVNPI
                     REAEKWHTYDRIEDVMDLESFVHLRTQIWRLLREQHDPDDH"
BASE COUNT         1950 a         2396 c         2027 g         1853 t
ORIGIN      
        1 cactaaaccg ctcggcaatc aattgatcga aggcgtcgct tttgctgaac cattgcttgg
       61 gtgtcatttg atcaaaccag aatgacagaa tctcacgcgg ctcaatctcg ctcggttcag
      121 tacttgaaga gggacgttgt gatggttgca tgtggtgatt acatgtggtg gttgcatgct
      181 caatgataga ttgcaactga agcaggatgt tcaacaggaa tcgtggttaa gcttaccgca
      241 tcgcaacggg cagcaagctc agagcccaac gcgcaggcgt cttaacctaa tcatcaccac
      301 ctagtcatcg tcatcgtcac cgttgacaat gtcaggagtg accgcatcaa cagtgttaac
      361 gacggtttta acggtgtaga cagcagcgct acccacagca tcagcgaccg cgactgcggt
      421 gctgcagccc gataggaaca cgaccacagc gaacaggctt aagcatcggc taaaaacgct
      481 aaagcgatat tgatgatttg atacaggatc taacgatgat tcgacatcgt ctagtctgac
      541 attgtgattc atcacgacgt ttggtttcct cagggccgtt aggttatctc gctgcactta
      601 ttcggtttgc caaccacagc gaccgaaagg agatacaaag ccgcctagtg taacggctgc
      661 atcgactagc aagtccccga tgccgccaca aactccactt gcacccaata ccaccccacg
      721 gaaaaacaac aggcggctag gactcgacgg gtgcttacgt catcccgtga tgcagtgaat
      781 cgacccgctg cagccttaca cgcttgcatc taaggatttt tgctgctccc agagctgaac
      841 cgttgcaact gctagtgcct cagtcgagtc aatgcaatat tggtcaacga gctccggaaa
      901 gaaagacatc gcaatgggtg cttccgtgca cgccaaaatg acgctcgtag cgcccatttg
      961 cagtaaatgc tctacggttt cgcgcatcaa ctcgctggct tggctgactt tgccagcttt
     1021 gaccaacgcg atcgccggta gcatgcattg acgtgtgatc tcttcagacg gcgaaacggt
     1081 tgtgcggtgc cgtcgatcaa gtgcatcttg aaacaagcct gtgaccagtg ttgcctgcgt
     1141 tgccaccaaa ccaacccggt catgatccct ggttttagac acgacatcat cacaggtaac
     1201 ttcgacaatc gaaggaaaag gtaccgatgt acctgcagct aattcgcggt gccaatagtg
     1261 tgcggtattg cacggcatca ccaaagcggt agcgcccgca acaatgagcc gatcacgaat
     1321 ttcaacgagc ctaggtagcg gtgactgcgc accatcgagg agcgctgcgg gccgcctcgg
     1381 aatccgagga tcactgctaa ttaacaccgg cacgtgttgt tcgtcatgct cagctgaggt
     1441 tgcggcaatg accttttgca taaagtcggc cgtggccaat gggcccatgc caccaatcac
     1501 cccaatcata attgcgctcc aagaaaaatt atttggcact cgttaaggcg gctaccctat
     1561 tgcggcttgg ccacattcag tcccttaaca ctcgaccagg ttgctcgtca ttgcgctgcc
     1621 cctggtgaac aacctgaatg ccgttgaccc aaacatgggt gataccatct gggtgtctgc
     1681 gcggcatcag aaatgaactg cgatcctgga gcaccgtcgc atcaaacacg acaatatcgg
     1741 caagagcacc agctctgata cgtcctcgat caatcaaacc gattcggtca gccggcttgc
     1801 tggtgatttt agcgacggcc tcaggcaaag aaataatatt ccggtcacgc acatagtgac
     1861 caagtagcct ggcagtccac ccgtatccgc ttagtgagcc gatggtgccg tttaacggcc
     1921 ctcgatcggt taatgccaag gtatctgaca tcaccatgga gtcggtctca cgcaggcaca
     1981 tacatacatc gtcatcagaa aagctgcgcg acgtccacat gaccgcagcc atgtcctgcc
     2041 cttcttccaa caaaatgtct aaaaccgcat cgtacggatc caccccacgt tgttgaccaa
     2101 tttgcgcaaa ggaaaggccg ataagatcag cgttcacgcg agacttcaac agtacaatgt
     2161 catcccaccg acgctcagtc accaatcgcc agatcggacg cggattgcgc ttcatacgct
     2221 cccgctcaac gggatctttc aggcgggcaa gcgtttgggt ggctccaccc tctctggccc
     2281 aggcaggcag aaccgagacc atgaccgtgt gactccagtc gtgcgggatg atgtcgtagg
     2341 ccacatcaac accctcacgc ttggcacggt aaagcaactc caaagtgtgc tgcatcgcct
     2401 gtgatggtgc gccaaacttg ggctgaatat gcgaaatctg caatttcgca cctgcgtgtc
     2461 tggccgtggc caccgcttca gtaaacccca ggtcgtaata cacatcgcgg tttctgacgt
     2521 gcgtggcata aagcccaccg cgtttggccg ccaccgccgt cagcgcttca atctcttgta
     2581 ttggcgcatc gctacctggc caatactcca agcccgtgga caaacctttt gcaccgtcat
     2641 caaacgcctg ttcggtcagt ttgaccatcg cagacaagtc agactcgctc ggggctttag
     2701 cgtcatcacc catcacggct cggtgaatgg caccatgacc cacaaaagca gcgacattca
     2761 cagcggggcg cgcctgctcc aatcgatcaa gatattcccc aaaggttctc caggtcacgt
     2821 ccatgccaag ttcgacgtag ccaatcacag cgcgcgcgcc agcggcacgt ttgagcggcg
     2881 cacaactaaa accgcactga ccgatcacct ccgtggttac accttgacat atctggctat
     2941 cggcacgccc atcgacaagc agcgtgtagt ccgagtgcgt atggatatca ataaaacccg
     3001 gtgcaacggt cagccctcga caatcatggc gaacggcagc ttgggcgctc gagagatcgc
     3061 cgatcgcagc gattcggtcg tctttgatgc cgatatcact atagtaggca tcggcaccgg
     3121 ttccatcaat caccgaaccg ccctcaatga tggtgtcgta gacgtttacc atcgacagtc
     3181 ccgggtttga gctgacgctc aaaccggctc aagcccttgg aatgcgtgca tatagccata
     3241 aaggccaacc gcgccaccgg tgtgtaaaaa cacaacgttt tgtccttttt tgaagtggcc
     3301 ttttctgcac aaatcaataa gaccagccat gcccttacca gagtagaccg gatccagcaa
     3361 aataccctct aggcgcgcga gcatggttac ggcctcaatc atgccaggtg tgggtctgcc
     3421 atagccctca ccaacatagt cgcagttagc caccacatcc tctctagcca ctgaacccgg
     3481 caatccaagc aaatcagcgg tctgctgtgc aagctcaaat accttaccct cctgcgcagc
     3541 ttggggtacg cgcacaccca cgccatacac cggaatctgc gagcgcgaac cgtagagccc
     3601 cgccaccaga ccagcctgcg taccggcact accggtggcg tgaaccagac tgtcgatttg
     3661 caaacccatg ttgttggctt gatccatcaa ctccagtgca catgtcacgt atccaagtgc
     3721 accaatggcg tttgagccac caccggggat gatgtagggc ttgagacctt gccctttcaa
     3781 gtccgtggcc agatctgcca ttgctgcatt catgtcagtg tcagcaggca cttccgagac
     3841 gtgagcacca tacagatggt ctaagaacac attacccgaa tccctgtagt cctcgaactg
     3901 gtagccggtt cggtcttcca ggatgatgta gcagcgcata cccatcttgg cggcaatcgc
     3961 caccgtctga cgtgcatgat tagactgtgt cgcgccttgc gtgatgatgg tgtctgcgcc
     4021 ttgttgttgg gcatcggcca tcaagtactc aagtttgcga gttttattac cgccagtggc
     4081 caaaccagtg caatcgtctc gtttgatcca tagattgggg ccaccaaggg cttcagtcag
     4141 tcggtgcatc ggctcgattg ctgtggggcc atgcgtgatt cgtacacgtg ggaatttgga
     4201 cagcttcatt taacactcca gtttcaaatt agtcgacact tgctcaaacg ctcaagtgtt
     4261 tgggttcagt ttcaagcgag cgcttaataa cgtcggcgat atagcggcat tgttcttggg
     4321 ttagtgtcaa tggaatgcgg acatcacaca aaccctgcaa aattcggtct gcattgggca
     4381 agacttgtgg ctccccaaaa aactgccaat gccgccacac acttgtgaat ccgatcggcg
     4441 catcagcacc gaaccattta atgtgcacac cctctttcgc acaacgatcg atgacagctg
     4501 aaatctgcgc tgacgacata ccctcgagca caaattgaat cgagctcgcg atgtactgct
     4561 ctttcgctgg ccggtggggc aatcgcaacc ctggtgcacc cgagagacct tcggcaatcc
     4621 aagagtagcg ctgattccaa cgattgccgc gatcggccag aaccaggcca aactgtgggc
     4681 gtgccaatgc agcagccaga ttgctcatcc gcagactgaa gtttggcgta atgtattccc
     4741 aacgctcaaa taccgaatca tccgggcggg atacatgtgc tctatagagc atataactgc
     4801 ctgacaggag cacggcctgc gcggcaatat cttcatcatc ggttaccagc agcccaccct
     4861 cgccgctgtt ggcgtgtttg taactctgca agctaaaaca tcctgcctta ccccaacgtc
     4921 cggtccagtg accatcccag gccgcgccca tggtgtgggc gcagtcttcg atcaaggtaa
     4981 tgtcatggcg ggtgcagaac tctgccagca cctgcatgtc gcaaatgtga ccgcgcatgt
     5041 gcgacaaaag caataccttg gcgccgcttt gcttggcttt acgttctaag tcatccatgt
     5101 cgatcacaag atcatctgtg atgtcaacaa gcacaggcaa agcaccaacg tgggcaatcg
     5161 caccgggcac tggtgccagc gtgaagcagt tcgacaatac tttgtcaccc ggcttcacgc
     5221 cagcggcctt gagtgccacg aacatggttg agccacatga gttcatggcc acgcaatatt
     5281 ttgcgccaac ctctttggca aattcaactt caagcatgga cgcttcgctt ggcttggcac
     5341 cgacctcacc atagcgatgc aatttgccac tttgcatcag tgccaacgca gcctcaacac
     5401 cggcggtggg tatcggttct tgggccgtga gatcaaggtg aggatcggtc tgtgtgttca
     5461 ttttgttagt gactccggtg accgtctaac gaccctaaat caaatgactc agccgggtag
     5521 tacttgtgca ggcgaacatc acccgttcgg gcatggcctt ccatgccctc tagtctcgaa
     5581 atacgagcgg ccacctgccc gacaaccttc gatgcgctgc gatcaagccg ctgccaggtc
     5641 accgtcttga tgaacttgcc aacgcttaag ccacccgaat atcgggccgc acccttggtt
     5701 ggcaatatgt gatttggtcc actgcatttg tcaccatagg caaccgtggt ttcttcccct
     5761 aaaaacagcg aaccatagtt gcgcaagtta gacaaccacc aatcgagatc ctctgccatc
     5821 acctgcaagt gttcactggc atacttgtca ctgatgcgca cgacctcctc gggcgtatcg
     5881 cacacaatga cttcagcgta gtcacgccaa gcggcggtgg ccgatttttt tgctagatcg
     5941 ggcaatgact caatcacaga aggcgccaat cgaatgacct cttgcgcaac tcgtcgtgac
     6001 gtggtgaaga gccaaactgg cgaatccggc ccatgctcgg cctggccgat caagtcagct
     6061 gtgaccacag caggatcggc tgtatcgtca gcgatgactg ccgactcggt agggcctgcc
     6121 accacatcaa tcccaacacg gccaaacaac atgcgcttgg cctcagccac aaaccggtta
     6181 cctggcccga caataatgtc agcctcatgg ccactaaaca atccgtatgc cagcgaagcc
     6241 actgcgtgca caccgccaag cgccaacacc gtatcagcac cacttagttt catggcatat
     6301 aggatccctg ggtgcacgcc atgatccttg gtcgccggtg acgtcgcaac aatgtggtcg
     6361 acccctgcca ctttggcagt cgccacactc atcagcgcgc tcgctgcgtg ggcatatcga
     6421 ccaccgggga catagcaacc ggcagtctgg caaggaatca gtcgctgacc aacggtgagc
     6481 ccgggcagca attcggccgt gaactcttgc atcgagtcgc gttggcgttt ggcaaaatcc
     6541 acaattcttt gatgcgcaaa ctgaatatcg ctcttgaccc cttcagatag cgctttttct
     6601 gcatcggcaa agtgagtagg tccaagaaca atctcgccct catagccgtc taactctcga
     6661 gcgtatcgct taacaacttc ttcaccacca gcctcaattt cagccaacat actgctaacc
     6721 gtctgagccg ttgcggtatc gatctgcgcc acgggcggat ttgctttctt caaatattcg
     6781 attgccatga gaaactcact cgtgtggtag cgtgcgcttt aacccggaga ctcccgagtt
     6841 aaagcgcaca agatgaaaca aagaactgcg tttaattcgt cgagttggca aatgccttta
     6901 gctcgggcgt gttttcaacg attttgaggt acttgtcagt gacgtaagtg ctagcctcgg
     6961 gcaaaggctc atcggcacgc aacgacccca cctctttcat gaactcagca atcgtgttca
     7021 tggttttatc ggccattgat ggtccagcgc tgctgttaaa gagctctaac tgctctgaca
     7081 agctgtacat cggtcgcagg tcaagttcct tgttcattgc cgcctcggag ataaccacgc
     7141 cgccttggtc atagtgcttt ttcatgatgg ccagcgcttc ggcacgattg gctttcatgt
     7201 aactctgacc acgcaggtag acggccagaa acttggcgac tagctctggg ttctgttcac
     7261 cccagtcggc cctgacaacc atgttgcctg gcaccatggt gccagtgtct ttacccgaac
     7321 acaggtattt cccgcccgct ttttcctcga cggtgtaggt gtttggcgcc cacagaccac
     7381 cgatattgac attgcccgag ctcatgccag cgatgatttc actttgcccc atcgagcgaa
     7441 ccgtgacgtc atctttgcca agaccaaatt tcgccaagca agaacgggct gctagatcaa
     7501 cggttgagtt gcccgtcagg aaaatcgtac cgcctttgat cgaactagga ttggcaatga
     7561 aggcatcagc atcggagccg ttgacataga gtgcattggt cgccgactgg tcatccgaga
     7621 atgcaatggt atccagatca aatcgcaccg caccgagcac agctggcaca ctgcctgtgt
     7681 aaccgacatc ccagctgcgg ctagccgcaa tctgaggcgc gcccgctgga aaatctgtaa
     7741 tggtgacttt taagccaagg tcggcccacc aacctttttc attggctagt gcaaatggca
     7801 ccgaaccaag caaagcgggt tgtgaactaa ttcgtacttc ttgcagctct tgtgcctgaa
     7861 cagcagtggc agaaagtgct acaagtgcga ctgccgtcaa ctttctatag gtatttttca
     7921 tcgctacttt ctcgatacat ggtggttgca acaaggggag accagttatc aatggtcatc
     7981 cggatcatgt tgctctcgca acaatcgcca gatctgggtt cgcaggtgca caaaagactc
     8041 gaggtccatg acgtcttcaa tccggtcata ggtatgccat ttctcagctt ctcgtattgg
     8101 attgacatca atcacctgct tgatagtgcc tgggcgtcgc gtcatcacca caacacggtc
     8161 agccagatac accgcttctt caacagcatg ggtaataaac atgacggttc ttggattggc
     8221 gcgccc
//
LOCUS       DATBNL010000243         1622 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_171884, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000243 DATBNL010000000
VERSION     DATBNL010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171884"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VIC30_03975"
     CDS             complement(<1..445)
                     /locus_tag="VIC30_03975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803576.1"
                     /translation="MSFVKLALRIVLIAAILAYFVVAAGLLVTRYYVLPRVDQWRPDI
                     QKVLSEAVGTPVTFDAISADWRGLNANLTLTNLTIRDEGGVAQLGIPKTDAILSWRSL
                     IAMEPVFRYVGLDDVIVVARRAPEGTIFVGGFDVSTDDGDTSFWQS"
     gene            573..>1622
                     /locus_tag="VIC30_03980"
     CDS             573..>1622
                     /locus_tag="VIC30_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamine synthetase
                     adenylyltransferase/deadenyltransferase"
                     /protein_id="HEY7803577.1"
                     /translation="MKSESLMTASQWSGALNRRLQANPELADWLQSACEHNITSDCLA
                     RWFETLSGQTPDQAVLSVTACRRVLRQLRERVFYAVMVRDLAGQADLSEVTGAMTRLA
                     EIAVEQAYRSVMQDMVARHGAPLDPTSGQPMEMIIIGMGKLGGGELNVSSDIDLIMLY
                     GDEGETTGPRPMSYHEFFGNVTRRMMPIISEPDEHGQVFRTDLRLRPDGDAGPLAWSL
                     DAFEQYLFTQGREWERYAWLKGRIMPARFFTDSDMNLTEQHVESMRQPFVYRKYFDFD
                     ALAALRDLRERIRQDWQRRASARNGVDTEHNIKLGNGGIREIEFVVQLTQLIRGGKMP
                     ALQQRPLLQALRAQQR"
BASE COUNT          397 a          451 c          426 g          348 t
ORIGIN      
        1 ctgactgcca aaagctggtg tcaccgtcat cggtactgac atcaaacccg cctacaaaaa
       61 tggtcccctc aggtgcacgc ctggcaacca caatgacatc atcaaggccg acgtaccgaa
      121 acaccggttc catggcaatc aaactgcgcc aagataaaat cgcatctgtt ttcgggatgc
      181 caagttgcgc aacgccgccc tcatcacgaa tggtcaagtt cgtcagtgtc agattggcat
      241 tcaaaccacg ccaatccgcg ctgatggcgt caaacgtcac aggtgtacca acagcctcac
      301 ttaatacttt ttgaatgtca gggcgccact gatcgacacg aggcagcacg tagtaacgag
      361 tgaccaatag acccgcggcc accacgaaat acgctaagat ggcagcaatg agcacaattc
      421 gaagtgcaag tttgacaaaa gacaaagaga ttcccgcccg acattgaatc aatgggatat
      481 cgtaatacga tcgttactac cgtatttata gcagtttaag cctacatatt ggtttagcca
      541 ggtagttact tcgactgcgc gagacaatgt ccatgaaatc tgaatcacta atgactgcca
      601 gtcaatggtc cggcgctttg aaccgtcggc tgcaggccaa ccccgaacta gctgactggt
      661 tacaatcggc gtgcgagcac aacatcacct ctgattgtct ggctaggtgg ttcgaaacac
      721 tcagtggaca gacgcccgat caagccgttt tgtcggtcac tgcctgccgg cgcgtgcttc
      781 gacaattgcg cgaacgggtg ttttacgctg tgatggtacg tgatcttgcc ggccaagccg
      841 acctatcgga agtcaccgga gccatgacgc gcttggctga aatagccgtg gagcaagcct
      901 accgcagtgt catgcaagac atggtggcgc gccatggcgc gccactggat ccaacttccg
      961 gacagccaat ggagatgatt atcattggta tgggcaaact tggcggtggt gagttaaatg
     1021 tctcgtctga tatcgatctc atcatgctgt acggtgatga gggtgagacc accgggccta
     1081 ggccgatgtc gtaccacgag ttttttggca atgttacccg gcgcatgatg cccatcatct
     1141 ctgagcctga cgaacacggc caggtgtttc gcaccgacct gcgccttcgc cccgatggcg
     1201 acgctggccc cttggcctgg agcctcgatg cgtttgagca atacctgttc acacaaggcc
     1261 gggagtggga gcgctatgcc tggttaaagg gtcgcatcat gccagcacgc ttttttaccg
     1321 atagtgacat gaacttgacc gagcagcatg tcgaaagcat gcgccagcca tttgtctatc
     1381 gcaaatactt cgactttgac gccctcgctg cactcagaga cttgcgcgag cgcatccgcc
     1441 aagactggca gcgtcgtgcg tcagccagaa acggtgttga caccgaacac aacatcaaac
     1501 tgggtaatgg ggggattcgt gagatcgagt tcgtggtgca actgacccag ttgattcgcg
     1561 gcggcaaaat gcccgccctg caacagcgac cattattgca agccttgcga gcccagcagc
     1621 gt
//
LOCUS       DATBNL010000244         2338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_12900, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000244 DATBNL010000000
VERSION     DATBNL010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12900"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VIC30_03985"
     CDS             complement(<1..724)
                     /locus_tag="VIC30_03985"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF009897.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEY7803578.1"
                     /translation="MTANASLEFSVSTSSQRRSDQERDHILANPGFGVNFTDHMVGID
                     WTVDQGWHNARVQPYGPLMLDPACSVLHYAQEIFEGLKAYRHADGSVWAFRPQANAAR
                     MQRSATRLALPPLPEADFLASIRALVSVDKDWVPTAPETSLYLRPFTIANERFLGVRA
                     AQRAAYYLIASPAGAYFPKGVAPVSIWVSEHYTRAARGGTGAAKCGGNYSASLLPQQE
                     AQQNGCSQVLFLDAVDATYLEEL"
     gene            907..>2338
                     /locus_tag="VIC30_03990"
     CDS             907..>2338
                     /locus_tag="VIC30_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008119117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7803579.1"
                     /translation="MQTQSHVAGKPLALADSFGVFDYIVVGAGTAGCLLANRLSADPS
                     KRVLLLEAGGPDNYHWIHIPVGYLYCIGNPRTDWRFKTEAAPGLNGRELGYPRGKVMG
                     GCSSINGMICMRGQRQDYDGWRDAGNPGWGWDDVLPIFKSMEDHHAGANDWHGAGGNW
                     RVEKQRLSWEILDAFRDAASQAGIAKIEDFNRGNNEGAAYFEVNQRAGWRWNAVKAFI
                     KPIKHRKNLTILTHARTTELLFTDRRATGVAFVHNNQQTHAQAKSAVVLAAGSIGSVQ
                     ILQSSGIGPGKLLQSLNIPVLHDLPGVGRNLQDHLQVRTVFRIQNAKSLNTMANNLVG
                     KAKMGLEYLFKRTGPLSMAPSQLGVFARSGPEHDRANVEYHVQPLSLEKFGDPLHDFP
                     AFTASVCNLRPTSRGFVEITSPDTSAAPRINCCYLSTEEDRKVAAQSIELTRRIAAQP
                     ALAPYHPEEIKPGPQITSPEALAKAAG"
BASE COUNT          560 a          615 c          671 g          492 t
ORIGIN      
        1 taagctcttc aagataggtt gcgtcaaccg catcgagaaa caagacctgc gagcaaccgt
       61 tttgttgggc ctcttgctgc ggcaataagg aagccgagta gttaccacca catttggccg
      121 cgcccgtgcc accacgcgca gcacgtgtgt agtgctctga tacccaaatc gacacaggcg
      181 ccacaccttt ggggaaatag gccccagctg gtgatgcgat caagtagtaa gccgccctct
      241 gggctgctcg cacaccgaga aaccgctcgt tggcaatggt aaagggtcgc aagtacaggc
      301 ttgtctcagg tgccgtgggt acccagtctt tgtcaacgga cacaagcgca cggatcgacg
      361 ccaaaaaatc tgcttcaggc aagggtggca aagccagtcg agtcgcagag cgctgcatac
      421 gggcggcgtt ggcttggggg cgaaaggccc aaaccgaacc atcggcatgt cggtaggctt
      481 tcagtccctc aaatatttct tgtgcataat gcagtactga gcaagccgga tcgagcatca
      541 agggcccgta gggttgaacg cgcgcattat gccagccttg atcgacggtc cagtcgatgc
      601 cgaccatgtg gtccgtgaag ttaacgccaa acccagggtt ggcgagaata tggtcacgct
      661 cttggtcgct gcggcgctgt gaagaggtgg agactgagaa ttccaggctg gcgttggcgg
      721 tcatgattgt ttagtgagat gaggttgggc tagcgccaaa aatagtgtcg acacacctac
      781 agttggcagc acccaaactt gacggctacc ctgcaaatga actaaatccg ataaggatac
      841 aacgtaaaac aaaattgtgg ttccatgagc gtcactaaac atgaaaccac cgggagatga
      901 gacaaaatgc aaacgcaatc gcatgtggcg ggtaagccct tggcgctagc ggacagcttt
      961 ggcgtatttg actatatcgt ggtgggtgcg ggcacggctg gttgcctgct ggccaaccgc
     1021 ttgtcagctg atcccagtaa acgcgtgttg ttgctagaag cgggtggtcc agacaattat
     1081 cactggatcc acatcccggt agggtactta tattgcatcg gtaacccaag gaccgactgg
     1141 cgctttaaaa ccgaggcagc ccccggctta aacggtcgcg agcttggtta cccacgcggc
     1201 aaagtcatgg gtgggtgttc ttcgattaac ggcatgattt gcatgcgggg tcagcgccaa
     1261 gactatgacg gttggcgcga tgcgggtaac cccggctggg gctgggatga tgtgttgccc
     1321 atcttcaagt ccatggaaga ccatcatgcc ggcgccaacg actggcatgg tgctggtggc
     1381 aactggcgtg tagaaaagca gcgactgtcc tgggaaatac tagatgcgtt tcgtgacgcg
     1441 gctagccagg cgggcattgc gaagattgaa gatttcaacc gcggtaacaa cgagggggca
     1501 gcttattttg aggtgaacca gcgtgcgggc tggcgctgga atgcggtcaa ggcctttatc
     1561 aaacccatca aacaccgcaa gaacctcacc atcctgacgc acgctcgcac caccgagctg
     1621 ctgttcacag acaggcgcgc cacaggcgtg gcgttcgtgc ataacaacca acagactcac
     1681 gcacaagcta aaagtgcagt ggtgctcgcc gcaggttcta tcggttctgt tcagatattg
     1741 cagtcgtcag gcatcggtcc aggcaagttg ttgcagtcac taaatatccc ggtcttgcat
     1801 gatttgcctg gtgtgggccg caacctgcag gatcacctgc aagttagaac agtcttccgt
     1861 attcaaaatg ctaagtcctt aaataccatg gccaataact tggtgggcaa agccaaaatg
     1921 ggattggagt atttgtttaa gcgaaccggc ccgttgagca tggcaccgtc gcagttaggt
     1981 gtatttgcac ggtctggccc agaacacgat cgtgccaatg tcgagtatca cgtgcaaccg
     2041 ttgtcgcttg agaagtttgg tgatccgttg catgacttcc cggcattcac ggcgtcagtc
     2101 tgtaatcttc gacccacgag ccgagggttt gtggaaatca catcacctga tacgagcgcc
     2161 gcgcctagaa ttaactgttg ttacctctcg acagaagaag accgtaaggt cgcggctcaa
     2221 agcattgagc tcacgcgtcg catcgcagcg cagcctgcgc tagcccccta ccaccccgaa
     2281 gagatcaaac ccggaccaca gatcacgagc cctgaggcat tggccaaagc tgctggtg
//
LOCUS       DATBNL010000245         2233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_92663, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000245 DATBNL010000000
VERSION     DATBNL010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92663"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /gene="dnaN"
                     /locus_tag="VIC30_03995"
     CDS             complement(<1..957)
                     /gene="dnaN"
                     /locus_tag="VIC30_03995"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEY7803580.1"
                     /translation="MQLIKANRDALLKPLTTVAGIVERRHTLPILANILLRKRGNQVS
                     FIATDLEVQITATAMFGVGDEDVDLTVAARKLLDILRALPDGEEITLSQAPNKLTVQC
                     GKSRFSLQTLSAAEYPTLAEPEAVNVGIALLQKTLKHLFAMTHYAMAQQDIRYYLNGS
                     LLVFEPQALHAVATDGHRLAHCCCAADGIEATTEIILPRKTVLELQRLLEDSEETVKI
                     DVGAGQVRYQFEGVELISKLVEGKFPDYKRVIPTNYTQHFDVNREALLASLQRAAIMS
                     TDKLRSVRFQLADNTLTASSTNAEQEEALEEIEIDYPFAPLDV"
     gene            complement(961..>2233)
                     /gene="dnaA"
                     /locus_tag="VIC30_04000"
     CDS             complement(961..>2233)
                     /gene="dnaA"
                     /locus_tag="VIC30_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008157537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEY7803581.1"
                     /translation="LSYNKESGVLCLALPNRFKLDWVRRNFQDRLQRLATDWYQSPVE
                     ISLELVPSQPVTQPTAEPRPNEVTPKTASLPAQVPDADNRSRLNGQLTFENFVTGKAN
                     QLARAAAQQVAQNPGVSYNPLFLYGGVGLGKTHLVHAIGNALIAKRQSARVRYVHADQ
                     YVSDVVKAYQKKAFDDFKRYYHSLDLLLIDDIQFISEKKRTQEEFFYAFEAMVAQGRQ
                     IIITSDTYPKELSGIDDRLISRFDSGLTVAIEPPELEMRVAILLRKAQAEGFTMPEEV
                     AFFIAKHLRSNVRELEGALHKVLAYLRFHGRDDLSVEICRDALKDLLSVSNGQITVEN
                     IQKTVADFYKIKVADMYSKRRPASIAVPRQVAMYLAKDLTHKSLPDIGDLFGGRDHTT
                     VLHAVRKIADLRSKQAELNHTLHVLEQTLKG"
BASE COUNT          539 a          548 c          543 g          603 t
ORIGIN      
        1 aacatctagc ggcgcaaaag ggtaatcgat ttcgatttct tccaacgctt cttcctgttc
       61 agcatttgtg gaggacgccg ttaacgtgtt gtcggcaagt tggaaacgca cactgcgcaa
      121 cttatcggta ctcatgattg ccgcgcgctg caagctcgct agcagcgctt cacggttgac
      181 gtcaaaatgc tgtgtgtagt tagtaggtat gacacgtttg taatcaggaa acttgccttc
      241 gactagtttg gaaattagtt ctacgccctc gaattggtag cgcacctggc cagcacccac
      301 atcaattttt accgtttcct cactatcttc aagcaagcgt tgaagttcca gcacggtttt
      361 tctaggcaga ataatctcag ttgttgcttc gatcccgtcg gctgcgcagc aacaatgtgc
      421 gagacggtgc ccgtccgttg caacagcatg caacgcctgc ggctcgaaca ccaaaagact
      481 gccgttaaga taataacgaa tatcctgttg agccatggcg tagtgcgtca tggcaaacag
      541 atgcttaagc gttttttgta gcaatgcaat gcccacatta accgcttctg gttcagcaag
      601 cgttggatac tctgctgccg agagcgtttg cagagaaaac cgactcttgc cacattgcac
      661 cgtgagctta ttaggtgcct gtgacaacgt aatttcttca ccgtctggca gtgcacgcaa
      721 aatatcgagt aacttgcgag cagccactgt taaatcgaca tcttcgtcgc ccacgccaaa
      781 catagccgtc gccgtaatct ggacttcaag atcggttgcg ataaacgaca cttggttgcc
      841 acgtttgcgc aacaaaatat tggcaagaat cggcagcgta tggcgccgtt caacaattcc
      901 ggcaacggtg gtcaacggct ttaatagcgc atctcggttg gctttgatga gttgcatgga
      961 ttaacctttt aatgtttgtt cgagcacatg tagcgtgtga tttagctctg cttgtttgct
     1021 acgtaggtcg gcaatttttc gtacggcgtg caagacagtg gtgtgatccc ttccaccaaa
     1081 taaatctcca atatcgggaa gactcttatg agtcagatct tttgccaaat acatcgcgac
     1141 ttgacgcgga acggcgatgc tagccggtcg gcgttttgag tacatgtcgg cgacttttat
     1201 cttgtaaaaa tctgcgacag tcttctggat gttttcgacg gtgatctgtc cattggatac
     1261 agataacaga tcctttaatg cgtcgcgaca gatctcgacg cttagatcat cacgaccatg
     1321 aaaacgtaag tacgctaaca ctttgtgtag agcaccttct agctccctga cgttactgcg
     1381 cagatgtttc gcaataaaaa aagccacctc ttctggcatg gtgaaaccct cagcctgcgc
     1441 ctttctcaac aagatggcta cccgcatttc gagctcgggc ggctcgatag caactgtcag
     1501 gccagaatca aacctcgaaa tcaaacggtc atcaatccca gacaactcct ttgggtaggt
     1561 gtcgctagtg ataatgattt gtctgccttg ggccaccatt gcctcaaagg cgtagaagaa
     1621 ctcttcttgt gttcgttttt tttccgagat gaactgaata tcgtcaataa gtaacaagtc
     1681 tagcgagtgg taataacgtt tgaaatcatc gaaggctttc ttttgatagg ctttgaccac
     1741 atccgagacg tattggtcag catgtacata tcgaacgcgg gcactttgac gcttggcgat
     1801 cagggcattg ccaatggcgt ggaccaagtg ggttttaccc aagccaacac caccatagag
     1861 aaacaacggg ttgtacgata cacccgggtt ttgagcgacc tgttgtgcag ccgctctggc
     1921 gagttggttt gctttacctg tgacgaaatt ttcgaaggtc agctgaccat tgaggcggga
     1981 acgattatcg gcgtccggaa cttgcgcagg tagcgatgcc gtcttcggcg ttacctcgtt
     2041 aggtctcggt tcagccgttg gttgggttac tggttgactt gggaccaact ccagagatat
     2101 ttccaccggg ctttggtacc agtcggttgc tagtctctgt aatcgatctt ggaagttgcg
     2161 tctgacccaa tccaacttaa agcgatttgg cagtgctaga cacagcacac cactctcctt
     2221 gttataagac aaa
//
LOCUS       DATBNL010000246         4348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_132437, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000246 DATBNL010000000
VERSION     DATBNL010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4348
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132437"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VIC30_04005"
     CDS             <1..621
                     /locus_tag="VIC30_04005"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7803582.1"
                     /translation="DTSHGSVTADRIVVCPGDNYAGPLADIYQDAGLSHCTLQMLRVD
                     AGQSEAINCGLMSDLSLVRYEGYAELPAAKALLAQLQQEKSEQLSRGIHLIAVRSADG
                     SLVVGDSHQDGQTPIPFSDEYTDELIMNELRECLDLPNARVVSRWTGSYARLADHIYH
                     VSRPQPHVRSLIVTGGTGASTGLALGEDVLADLEGEIVMDNKGTEP"
     gene            618..1433
                     /gene="phnX"
                     /locus_tag="VIC30_04010"
     CDS             618..1433
                     /gene="phnX"
                     /locus_tag="VIC30_04010"
                     /EC_number="3.11.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016827 - hydrolase activity, acting on
                     acid carbon-phosphorus bonds [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA];
                     GO_process: GO:0019635 - 2-aminoethylphosphonate catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019636 - phosphonoacetate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonoacetaldehyde hydrolase"
                     /protein_id="HEY7803583.1"
                     /translation="MSTQTQTIEAVVFDWAGTVIDFGSLAPMGAFVKVFAGFDIEISI
                     ADARGPMGRAKLDHIRAIGELPHVNAQWLEKHKKAFDEEAALAVYEKFLPINREVVTD
                     FADLIDGVDSVIAGLRARNIKIGSTTGYTRDIMARILPLAAEQGFDPDNLVCAGDLWA
                     GRPTPVMMRKTFLDLQVTDSSRVVKVDDTPVGISEGIAAGTWTVGVAASGNEMGLSRA
                     EWLSLDTTTQADRITQASRRLLEAGAHFIVPTVASLPGVIEIVERRLAQNMRP"
     gene            1516..1591
                     /locus_tag="VIC30_04015"
     tRNA            1516..1591
                     /locus_tag="VIC30_04015"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1549..1551,aa:Asn,seq:gtt)
     gene            1738..2778
                     /locus_tag="VIC30_04020"
     CDS             1738..2778
                     /locus_tag="VIC30_04020"
                     /inference="COORDINATES: protein motif:HMM:NF013384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HEY7803584.1"
                     /translation="MIQSIELRSDNAAGVAPEVLRAVSAANSGSALAYGADQWTERLQ
                     ARVAEVFENADAAVFPVLTGTAANAIALSAMAPPWGAVLCHETAHILRSEAGATSMFG
                     AGLVMQGLPGEQFKLNPESLAQGFETTRWGDPHHSQPGVVSLTNPTDMGTVYTVEQIR
                     ALTTQARERGLLVHMDGARVANALATLGCRPADLTWRAGVDVFSLGATKNGVMTADAI
                     VSFDKEVNEQLTYRLKRAGQVASKMRFQSAQLLAYLEDDLWLSLAQHANRAMRKLSMG
                     LQELGIDLVAKPEANMAFLKVSNNIADRLADQGLLFYQTAPEVIRFVTSFSTQDADIE
                     EVLRRVKHVVYS"
     gene            complement(2856..4145)
                     /gene="eno"
                     /locus_tag="VIC30_04025"
     CDS             complement(2856..4145)
                     /gene="eno"
                     /locus_tag="VIC30_04025"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007742679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY7803585.1"
                     /translation="MKITHIDALQIFDSRGNPTVEAIVSLDDGSQGHGLVPSGASTGQ
                     FEAHELRDKDPNRFAGKSVDLAIANIRHEISDALLGMSAHNQQAIDTAMINLDGTQDK
                     SRLGANAILGVSMAVANASARSRNMPLFESLSNGQGVTLPLPEIQIFGGGAHANWRTD
                     LQDWLLIATGASSYAETLEITFNVYRAAGEILKSGNALYGCADEGGYWPAFSSNEEAF
                     DIFAQAVNKAGYTLGKEASLSLDIAASDLYDERTQQYRLKLDHKTYDPDKFIDQLIKW
                     CRDYKVVSIEDPAADTDWDSWRRFHKACGQELQIIGDDLFTTNPARISRGIEQNLANS
                     VLIKLNQIGTVSETIEAIELTQKAGWAPVVSARSGETEDAFISHLAVATNAGQLKVGS
                     FTRSERMVKWNECLRIERHLGSKACFKGVHALTNARR"
     gene            complement(4168..>4348)
                     /locus_tag="VIC30_04030"
     CDS             complement(4168..>4348)
                     /locus_tag="VIC30_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007742682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803586.1"
                     /translation="EMTTLAPAILESAARLLPMLLLARIDGKSPVEYLTHDKQTVARN
                     FAIAIFSSQVLISTP"
BASE COUNT          953 a         1063 c         1250 g         1082 t
ORIGIN      
        1 gacacaagcc atggctctgt aactgctgat cggattgtgg tttgtcccgg tgacaattac
       61 gcaggtccct tggcagatat ttatcaggat gcagggttgt cgcactgtac gcttcaaatg
      121 ctacgcgttg atgcagggca gtcagaagcg attaactgtg gtttgatgtc agacctgtcg
      181 cttgtgcgct atgagggcta cgctgagttg ccggcggcta aagcgctatt ggcccagttg
      241 caacaagaga agtctgagca actaagtcgt ggcatccatt tgattgccgt tcgttctgct
      301 gatggttctc tggtggtggg tgatagtcac caagatgggc agacaccgat accgttttct
      361 gatgagtaca ccgacgagct gattatgaac gagttgcgtg agtgtttaga tttgcccaac
      421 gcacgcgtag ttagtcgttg gacaggcagt tacgccaggc ttgccgatca catctaccat
      481 gtgagccggc cacaacccca tgtgcgcagc ctcatcgtga cggggggcac cggtgcctca
      541 acggggttag cgttaggcga agacgtattg gctgatctcg agggtgagat cgtaatggat
      601 aacaaaggga ctgaaccgtg agtactcaaa cacaaaccat cgaagcagtg gtctttgact
      661 gggctggcac cgtcattgac tttggatcac ttgcacccat gggggcattt gtcaaagtct
      721 ttgctgggtt tgacatcgag atcagcatcg cagacgcccg cggtcccatg ggcagagcca
      781 agctagatca cattcgggcg atcggggagc tccctcacgt gaatgcccag tggttagaga
      841 agcacaagaa ggcattcgat gaagaggcgg ctttggcggt ctatgagaaa ttcctcccca
      901 tcaaccggga ggttgtgaca gactttgcgg acctgattga tggcgtagat agcgtgatcg
      961 caggcctgcg agccagaaac atcaaaattg gctcaacaac cggttacacc cgagacatca
     1021 tggcgcgcat cctacctctt gccgccgagc aggggtttga tccggataac ttggtttgcg
     1081 cgggcgatct gtgggcaggt agaccaacgc cggtaatgat gaggaagact ttcttggatt
     1141 tgcaggtgac cgattcgtcg cgagtcgtca aagttgacga tacgcccgtc ggtatatcag
     1201 aggggattgc agcaggtacc tggacggtcg gtgtggctgc gagcggcaat gagatgggtc
     1261 taagccgtgc cgagtggttg tcattagaca ccacgaccca agcggatagg attactcaag
     1321 ctagccgccg tttacttgag gctggtgcgc atttcatcgt gcccactgtc gccagtctgc
     1381 cgggcgtcat cgagattgtt gagcgtcgcc ttgctcaaaa catgcgcccc taggctgtta
     1441 aaagggtttt aagcaatggc tctaagctga tttgcgcagt ctgacatttc agtgatatta
     1501 tcttgatctt tccaatcccc aatagctcag ttggtagagc gccggactgt taatccgtag
     1561 gtcactggtt cgagcccagt ttggggagcc aaaaattcga tacgcgagtg tatcagcgcc
     1621 cagcctttat ggctgggctt tttgttgcgc gtttcacttg ctttttttgc ggcatgattg
     1681 ctcgaggtct ggtcagcatg ggacaatcct agcctgttgt gttcagaggc gagaacgatg
     1741 attcaatcga ttgaattgcg cagtgacaat gccgccgggg tggcaccgga agtactacgg
     1801 gcggtgtccg cggcgaactc ggggtcggct ctggcttatg gggcagacca atggactgag
     1861 cgactacagg ctagagtcgc tgaggttttt gagaacgcgg atgctgctgt gtttcctgtg
     1921 ctcacgggta cagcggccaa tgcgatcgct ctgtcagcca tggcaccgcc ttggggggca
     1981 gtgttgtgcc atgaaacagc ccacatattg cgtagcgaag ctggtgcaac gagtatgttt
     2041 ggtgctggct tggtgatgca ggggctgcca ggcgagcagt tcaagttaaa tcccgagtcg
     2101 ctagcgcaag ggttcgagac cacgcggtgg ggcgaccctc accactcaca accgggcgtg
     2161 gtttccttga ccaatccaac ggatatgggc acggtgtaca cggttgaaca gattcgtgct
     2221 ttgaccaccc aagctcgtga acgtggcctg ctcgtacaca tggatggggc gcgcgtggcc
     2281 aatgctttgg caacgttagg gtgccgtccg gctgatttga cctggcgtgc tggtgtagat
     2341 gttttctctt taggtgccac aaaaaatggc gtgatgactg cagatgcgat cgtaagtttt
     2401 gacaaagaag tcaatgagca gctgacttac cgcttgaagc gggcaggtca ggtggcgtca
     2461 aagatgcgat ttcagtcggc gcagctactg gcgtatctag aggatgactt atggctttcg
     2521 ctggcgcaac atgccaatag ggcgatgcgc aagctatcca tggggttgca ggaactcgga
     2581 atcgacttgg tggctaaacc cgaggcgaat atggcctttt tgaaggtctc gaataatatt
     2641 gccgaccgat tggctgacca aggactgttg ttttaccaaa cagcacctga agtcattcga
     2701 tttgtaacaa gtttttcgac gcaggacgcg gacattgaag aggttctgcg ccgcgtaaag
     2761 catgtcgtgt attcatgact ggcagcgacc tgctctggct tcagtgacgg ttaccgaagc
     2821 ccgacaaacg ccgggtcatc acgccgctaa agatctcacc tacgcgcatt ggtcaaggcg
     2881 tgcacccctt tgaaacaagc tttcgatcct aaatgacgtt cgatgcgaag gcactcattc
     2941 cacttgacca tgcgctcgct gcgcgtgaaa gatccgacct tcagctgccc tgcgttggtt
     3001 gccacggcaa ggtgactgat gaaggcgtct tcagtctcgc cactacgcgc actgaccact
     3061 ggcgcccaac ccgctttttg tgtcagctcg atagcctcaa tggtctctga gacggtcccg
     3121 atttggttga gtttgatcag tactgagttg gctaggtttt gttcgatgcc acgagaaatt
     3181 cgcgcaggat tggtggtaaa cagatcatcg ccaataattt gtagttcctg gccacacgct
     3241 ttgtgaaagc gccgccagga gtcccagtca gtatctgctg ctgggtcttc gatcgatacg
     3301 actttgtagt cacgacacca tttgatcagt tggtcgatga atttgtccgg atcgtaggtt
     3361 ttgtggtcta gcttgagcct atattgctgg gttctttcgt catataagtc gcttgctgca
     3421 atgtccagtg acaggcttgc ttcttttccg agggtgtagc cagctttgtt gactgcctgt
     3481 gcgaagatat caaacgcctc ttcgttagaa ctaaatgcgg gccagtagcc accttcatct
     3541 gcacacccgt ataacgcatt gcccgacttt aaaatttctc cagcggcgcg ataaacgtta
     3601 aaggtgatct ctagcgtctc agcgtacgag ctcgcgccgg tcgctatcag cagccagtcc
     3661 tgcaaatcag tacgccaatt cgcatgagcg ccgccaccga atatctgaat ttcaggcaat
     3721 ggcaatgtca ctccttggcc gttactcaag gattcgaaca acggcatgtt gcgcgagcgt
     3781 gccgaagcgt ttgccacagc cattgagaca cccaaaatgg cattggcacc caacctggac
     3841 ttgtcttggg tgccgtctag attaatcatg gcagtatcga tagcctgctg gttatgtgca
     3901 gacattccta gcaaagcatc gctgatttca tgccgaatat tggcgatcgc aaggtcgact
     3961 gacttgccgg caaagcggtt gggatcttta tcgcgaagct cgtgcgcttc aaactgacca
     4021 gtagatgcac ctgatggaac tagaccgtgt ccttgactgc catcatcgag cgacacgatt
     4081 gcttcgacag tagggttgcc gcgagaatca aaaatttgta atgcatcaat gtgtgtgatt
     4141 ttcatagatg tgaataccaa cggtaggcta gggtgttgag atcaagactt ggcttgagaa
     4201 tatggcgatg gcgaagttgc gtgcgacggt ctgtttgtca tgggttaggt attcgaccgg
     4261 tgattttccg tctatccgtg ccaacagaag catcggcagt agtctggccg cactctctag
     4321 tatggctggc gccaaggtcg tcatttcg
//
LOCUS       DATBNL010000247         3088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_142357, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000247 DATBNL010000000
VERSION     DATBNL010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142357"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VIC30_04035"
     CDS             <1..282
                     /locus_tag="VIC30_04035"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEY7803587.1"
                     /translation="PGNFNVIPEPKEDGTLVTQGPYQWIRHPMYTSLLLFAAGCAVVI
                     DGWWAWYTWGALLVILWFKSEVEEHLLIKHFPHYVAYRQQSKRFVPWVW"
     gene            complement(313..747)
                     /locus_tag="VIC30_04040"
     CDS             complement(313..747)
                     /locus_tag="VIC30_04040"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020070525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY7803588.1"
                     /translation="MNQTTDRPAQAQRGDFAFFETMTLRYADNDANGHVNNAHYYSFF
                     DTAVEGYLRHQDLRQVLAGEISTPVVASSCRYFEEIAYPATIDVGVRVDRIGRTSINY
                     LVAIFVGDETLARAQGTFTTVATSRETGRPVDVPVAFCQAHP"
     gene            complement(918..1232)
                     /locus_tag="VIC30_04045"
     CDS             complement(918..1232)
                     /locus_tag="VIC30_04045"
                     /inference="COORDINATES: protein motif:HMM:NF020265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HEY7803589.1"
                     /translation="MATKSTTVRTNTKAKTAGLDARISNRLQVLVKRAAEIQGTTMTD
                     FVVHALEAAATETIEHSNQVLLAVQDQEAFARALIPPKNRTLRLSVLSPKQTNCSYLE
                     VG"
     gene            complement(1306..2199)
                     /locus_tag="VIC30_04050"
     CDS             complement(1306..2199)
                     /locus_tag="VIC30_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011806422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEY7803590.1"
                     /translation="MQLVTWNTQWCKGLDGIVSAQRIVDGARAMGDFDVLCLQEIAQN
                     YPSLTGDTAIDQPAEIARLLPGFEVVFGAAIDEQPLGQPLGQPQRQPLRQRFGNLIAS
                     RLPILQIQHLYLPSPMTSSITPGSTHAWMPRQCTVCTVQADWGPVRIMTTHLEYHSEL
                     QRLAQAQALRHWHQMFCEQQKAGALVDPNESGTPYQTKPYTADAILCGDCNFEPHSDP
                     YEVLTSPEQHHPFHDAWTRLHAGEPHPPTFRLYDDTYGPDAVSCDFCFVSETLAPRLK
                     HIAVDTTTQVSDHQPVMIDIC"
     gene            complement(2210..3031)
                     /locus_tag="VIC30_04055"
     CDS             complement(2210..3031)
                     /locus_tag="VIC30_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012207102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY7803591.1"
                     /translation="MYASSLTQAGWLGKIGAWLLAIVWILPLVYALWAAFHPAQYAST
                     FSWSAPLTLENFVAAWQAAPFAQYFANTIILVASILAIQLFLCTLAAYAFARYEFVGS
                     NVLFSLVLVQLMVMPEILLVRNYQTLTSLGLVDTLFGIGLPYFASAFAIFLLRQTFKT
                     VPKELVEAAQMEGANTLQILRHVYIPLAKPTYLAFSLVSVSHHWNNFLWPLVVSNSVE
                     SRPLTVGLQAFSSAAPGIDWSIITAATLLTSAPLLVGFLLFQRQFVQSFMRAGIK"
BASE COUNT          736 a          738 c          862 g          752 t
ORIGIN      
        1 ccgggtaatt tcaatgtgat tccagaaccc aaggaagatg gcacgctggt gacccagggt
       61 ccttatcaat ggatacgtca cccgatgtac accagcctat tgctgtttgc tgcaggttgc
      121 gcggtggtca ttgatggctg gtgggcctgg tacacctggg gggcgttgtt ggtgattctg
      181 tggttcaagt ccgaagtcga agagcactta ctgatcaaac acttcccgca ctatgttgct
      241 tatcgccaac aatctaagcg gtttgtgccg tgggtttggt gagacagttg gcctagacgt
      301 ggttttgttg gattaagggt gtgcttggca aaacgccaca ggcacatcaa ccggcctgcc
      361 tgtctcgcgt gatgttgcca cggtcgtaaa ggtgccttgg gcacgggcta gtgtttcatc
      421 accgacaaag atcgcaacca gataattgat gctggtgcga ccgatacgat ccactcgcac
      481 gccgacatca atggtggcgg gataggcaat ctcttcaaaa tatcggcagc ttgacgccac
      541 cactggcgtt gagatctcac cagctagcac ctgtcgcaaa tcttggtgac gtaggtaacc
      601 ttcaacggcc gtatcaaaaa aagaatagta gtgcgcattg ttgacgtgac cattggcatc
      661 gttgtcagcg tagcgcagcg tcatcgtttc gaaaaaagca aaatcgccac gctgtgcttg
      721 ggcaggtcgg tctgtggttt ggttcattac gttctcaatt ttttgtttaa tacacggtgt
      781 ttgtggctat gaagcacgac gtcattcgcc gcttaatatc ttgacctacc tgagtaatga
      841 aatagcggtt gagtgactcg actccacagt caaaaccact gctatccacc cctgattcga
      901 gtgcactgac gcgaaactta gccgacttca agatacgagc agtttgtctg ctttggtgaa
      961 agcacgctta agcgcagcgt tcggtttttg gggggaatta acgccctggc aaaagcctct
     1021 tggtcttgta cggcaagaag cacttggttt gagtgttcga tggtttcagt tgctgcggcc
     1081 tctaatgcgt gaacaacaaa gtcggtcatg gtcgtgccct gaatttcagc ggctcgcttg
     1141 accaagactt gcaggcgatt gctgatgcga gcatcaagtc ctgcggtctt tgctttggtg
     1201 tttgttcgaa cggttgtgct tttagttgcc attgatagat tcctaatttg ccgataatcg
     1261 tacggcaaat tggcggacac tagaagtgaa tacttggctg actaactagc aaatatcaat
     1321 catcaccggt tgatgatcag acacttgcgt ggtcgtgtca actgcgatgt gtttgagcct
     1381 aggtgccaaa gtttcactca caaaacaaaa atcgcaactc accgcatctg ggccataggt
     1441 gtcgtcatac agcctaaaag tcggtgggtg aggctcgccc gcgtgtagcc gcgtccaagc
     1501 atcatgaaac ggatggtgct gctcaggtga tgtcagcact tcgtacggat cactgtgtgg
     1561 ctcgaaattg cagtcaccgc aaagaatcgc atctgcggtg tagggtttgg tctgataggg
     1621 tgtgccggat tcatttggat ccacaagcgc accggctttt tgttgttcac agaacatctg
     1681 gtgccagtgt ctgagtgcct gcgcttgggc cagtctctgc agttcgctgt ggtactccaa
     1741 gtgggtggtc atgattctga ccggacccca gtcagcttga accgtgcaca ccgtgcattg
     1801 acggggcatc caggcgtgag ttgagcctgg cgtgatagag gaggtcatgg gtgaaggcaa
     1861 atacaggtgc tggatctgca gtatgggcaa tcgtgaggca atcagattcc caaagcgctg
     1921 tcgcagaggt tgtcgctgag gttgtcccag aggttgtcct aaaggttgtt catcaatcgc
     1981 tgcaccaaac accacctcaa acccgggtaa caggcgggcg atttccgcgg gctgatcgat
     2041 tgcggtgtca cccgtgagac tagggtagtt ctgagcgatt tcttgcaagc acagcacatc
     2101 aaaatcaccc atggcgcgag caccatcgac aatgcgttgg gcactgacaa tgccatctaa
     2161 gcctttgcac cactgggtgt tccatgtcac gagttgcatt gtgtgttcct cacttgatac
     2221 cagcgcgcat aaacgattgt acgaattgcc gctggaatag tagaaatcct accagtaacg
     2281 gtgccgaggt caacagggta gctgccgtga tgatggacca gtcaatgcct ggagcagcag
     2341 atgagaacgc ctgcaggccg accgttaacg gccgtgactc cactgagtta ctgaccacca
     2401 gtggccagag gaagttattc cagtggtggc tgaccgatac taaagagaac gctaaatagg
     2461 tgggtttcgc cagtggaatg tagacatggc gcagaatctg tagcgtgttg gcgccttcca
     2521 tttgagcggc ttcaacaagc tcttttggga cggtcttaaa ggtttggcgt agtaaaaaaa
     2581 tcgcgaatgc agaggcaaag tagggcaaac cgatgccaaa caaggtgtcg actagtccta
     2641 gggaagtcag ggtttgatag tttcgtacca acaggatttc tggcatcacc atcaattgca
     2701 cgagcaccaa tgaaaacaaa acattgctgc caacaaactc ataacgtgcg aaggcgtaag
     2761 ctgccaaggt gcataaaaac agttgtatgg ccagaatgct agccactagg atgatcgtgt
     2821 tcgcaaagta ctgggcaaag ggggctgcct gccaggcagc cacgaaattc tcaagtgtta
     2881 gcggtgccga ccaagagaag gtgctggcgt attgtgcggg atgaaaggcg gcccataggg
     2941 catacaccag cggcagtatc cagacaatcg ccagcaacca agcaccgatc ttgcccagcc
     3001 agccggcttg ggtcaggctg ctggcgtaca tggttgtgtg tgcgcttgcc atcatctgta
     3061 atgcgtccgt ttgtctaaca agaagaac
//
LOCUS       DATBNL010000248         2287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_72623, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000248 DATBNL010000000
VERSION     DATBNL010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72623"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..1394)
                     /locus_tag="VIC30_04060"
     CDS             complement(180..1394)
                     /locus_tag="VIC30_04060"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803592.1"
                     /translation="MHAQSWRLDKAAGNSRRSGRGGRQGSNASGKSNFLEALAFMRSV
                     VLHSFQHGDADASIPIKPFLLDDHSHAKPSTFVLDFVMQDVRYQLGFTLSHECVLEEW
                     LYAYPKRSQQVLYHRSIDADSAYYFGRSLAGNNRQIQSITRANALFLSTAAASAHPLL
                     TKVWHFFKDQLVLKLSPGSASNARLARELANNESLLAEAVKYLAMADTGISDVRITDK
                     PIPQVTKTKLSELYEVIGKLAGDHIKNEAPEVDRTIELGHNSVNGMVRYLDFDDESLG
                     TKYLFTLLPALLTTLDQGKVLVLDEITISLHTHLARGLVKLFKNKQTNPHGAQLLFST
                     HDTNLLGPGLLRRDEVWLTEKSDQGVTMLGPLSDYKTKITDNIERGYLQGRFGAVPYL
                     RGKLRGDSGEPS"
     gene            complement(1369..>2287)
                     /locus_tag="VIC30_04065"
     CDS             complement(1369..>2287)
                     /locus_tag="VIC30_04065"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7803593.1"
                     /translation="KKKGAGGARDSFRYPQGCKLDEKANRVYLPKIGWVKYRNSRQVI
                     GDIKNMTVSRKGGHWYVSIQTEYEAQTAPHPSTSIVAIDLGVSRFATLSNGSYIEPLN
                     IFKQLQEKLALAQRRLSKKVKFSANWKKQKKKIARLYERIANARHDFLHKASSLISKN
                     HAMVVVEDLKVRNMSKSAKGDLANPGRNVKAKSGLNRSILDQGWGMFIQMLQYKQTWL
                     GGEVIKVNPQHTSQTCPECQHVSKDNRTSQSRFKCVACGYTENADLVGALNVLARGHR
                     VLACGVETLVLTMKQEPLGSSDTRPILAA"
BASE COUNT          533 a          586 c          570 g          598 t
ORIGIN      
        1 atgtgaccgc accatcacgt tagtggatgg tcggtttacc ggtgatgagt ggcacaccag
       61 cccaagcccg gcgccgggct gaggaagtca gcaaacgctt atgccaaaca gcatgaaggt
      121 atgggcgtgc gcttgttgtt cggtgtggcg gcaaagggaa gtcaattttc ctactattgc
      181 taagacggct cgcctgaatc accgcgaagt ttcccacgta gatagggcac tgccccaaac
      241 cgtccctgca aataaccacg ctcgatgttg tccgtgattt tggttttgta gtcgctcagt
      301 ggccccaaca tggtcacgcc ttgatctgac ttctcggtca gccaaacctc gtcacggcgc
      361 agcagtcccg ggcccaatag gttggtgtcg tgcgtagaaa aaagaagttg cgcaccgtgt
      421 ggattggttt gcttgttctt aaacagcttg actagaccac gagccaagtg ggtgtgcaaa
      481 ctgattgtta tttcatcgag cactaaaacc ttaccctgat ccagcgttgt gagcaaagcg
      541 ggcagcaacg tgaaaagata tttggtaccc agactctcat catcaaaatc caagtaacga
      601 accatgccat tgacactgtt gtgcccaagt tcgatggttc tatcgacctc aggtgcttca
      661 ttcttgatgt gatcaccagc taacttacca atgacctcat atagctctga tagctttgtc
      721 ttagtcactt gcgggattgg cttatcggtg atccgaacat ctgagatacc cgtgtcagcc
      781 atggccaaat acttcactgc ttcggccagc agactctcgt tattggcaag ctctctggcc
      841 agccgcgcat tgctcgcgct accgggtgat aacttcaaca ccaattgatc tttgaagaag
      901 tgccatacct ttgtaagcag tggatgtgct gaggctgctg cagtagacag aaacaaggcg
      961 ttagcgcggg tgatgctctg aatctgtcgg ttgttgccgg ccaatgatcg accaaagtaa
     1021 tacgctgaat ctgcgtcaat gctgcgatga taaagcacct gctgcgagcg tttgggatac
     1081 gcgtaaagcc actcttcgag aacgcactca tgcgacaagg taaaaccaag ctggtagcgc
     1141 acatcttgca ttacaaagtc gagcacaaag gttgaaggct ttgcgtggct atggtcgtcc
     1201 aagaggaaag gcttgatagg gatagaagca tccgcatcgc cgtgctgaaa cgaatgaagc
     1261 accaccgagc gcatgaaggc aagtgcttca aggaagttgg atttcccgct ggcattgctg
     1321 ccttgacgtc ctccccgtcc tgaacgacga gaattcccag cggctttatc aagccgccaa
     1381 gattgggcgt gtatcgctac ttcccaatgg ttcctgcttc atcgttaaaa ccagggtttc
     1441 aactccacag gcgagcaccc gatgccctcg ggctagtaca tttaacgcac caaccaagtc
     1501 agcgttttcc gtataaccgc atgcaacaca tttaaatctt gactgtgagg tgcggttgtc
     1561 tttactgaca tgctggcatt ctgggcaggt ctgcgaggtg tgttgaggat ttaccttaat
     1621 cacttcgcca cctagccaag tttgcttgta ttgaagcatt tgtatgaaca tgccccagcc
     1681 ttggtccagg attgatcggt ttaagccaga cttggctttc acgtttcgcc ccggattggc
     1741 taggtcgcct tttgcggatt ttgacatgtt tctgaccttc aagtcctcaa caacaaccat
     1801 ggcgtggttt ttgctgatca gtgatgaggc tttgtgcaag aaatcatgtc tcgcgttggc
     1861 gatgcgttca tacaaacgcg ctatcttctt tttctgcttt ttccaattgg cagagaactt
     1921 aacttttttg ctcaaacgcc gttgagccaa agccaacttc tcttgcaact gcttgaaaat
     1981 atttaatggt tctatgtacg aaccgttaga caatgtcgca aagcgactga cgcccaagtc
     2041 gatggcgacg atcgaggttg atgggtgagg agcagtttgt gcttcatact cggtttgaat
     2101 cgacacgtac cagtgcccgc ctttgcgact aacggtcatg ttctttatgt caccgatcac
     2161 ctgtcggctg ttgcgatact tgacccagcc aatcttgggc aggtacaccc gattggcttt
     2221 ctcatcgagc ttgcaacctt gcgggtagcg aaaactatcg cgcgcgccac ccgcaccttt
     2281 cttctta
//
LOCUS       DATBNL010000249         6002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_12987, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000249 DATBNL010000000
VERSION     DATBNL010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6002
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12987"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            885..2081
                     /locus_tag="VIC30_04070"
     CDS             885..2081
                     /locus_tag="VIC30_04070"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1611 domain-containing protein"
                     /protein_id="HEY7803594.1"
                     /translation="MFKTPSLSPPVTKSTNSHKPTRGAAVRPTPISSPDTESQFATAI
                     VYCEASFGAVDGKTANGLIRRSEKYQIMSVIDSEQVGQDTGMVLDGKANDIPISRDLD
                     NALAQLGFVPDAFIFGMAPASGLLSKRQRGVILEAMSHGMDIVNGLHEFLNDDPVFAA
                     ACRANNVTINDVRKPRDKKDLRLFSGRIAQVTCPRIAILGTDCAIGKRTTATILTSVL
                     NDHGLKTVMIGTGQTGLIQGARYGVALDAVPSQFCAGELEAIIVEAYENEKPDVIVIE
                     GQGALSHPAFSSSAFILRGSCPTGVVLQHAPKRHTRCDFDQMPMPDPAAEINLIQTFA
                     DTKVIGLTINHESMDDAEISSAIEKYERELGIAATDALSRPADKLLDMVVSAFPELKW
                     KLTGHA"
     gene            2057..3229
                     /locus_tag="VIC30_04075"
     CDS             2057..3229
                     /locus_tag="VIC30_04075"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/ornithine racemase family PLP-dependent
                     enzyme"
                     /protein_id="HEY7803595.1"
                     /translation="MEVNWPRVMPAPRLEIDLTKIHHNASRLVAQFALQGIAITGVCK
                     ATLGMAEVANTLRDAGVRYLADSHIENIESMRRDGVCAEMVLIRSPMLSQVARVVAAA
                     DVSFNTEIDVIRHLSAAAQKTNRVHGVVLMVELGDRREGIMPHDVLAMARETLHLPNL
                     VLKGIGTNLACRNGICPDVTNMAELSALADLIEATFEIKLELVSGGNSANVDWGLSHA
                     SAGRINNLRLGESILLGCETLQRQPIAGLYTDAFTLVAEVIESNIKPSKPRGVAAQTA
                     FGGVATVLDRGLVMQSILAIGRQDIDPDGLVAPTGIEVMTASSDHLIVESEVTPLPVG
                     AEVAFQLNYTSLLLAMTSPFVAKIIKMDPRLMPVSALSSLPNAYLVSQIPPALAQT"
     gene            complement(3199..4257)
                     /locus_tag="VIC30_04080"
     CDS             complement(3199..4257)
                     /locus_tag="VIC30_04080"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEY7803596.1"
                     /translation="MNETTLSSPSLRSTLSHAWQHERVWLASVLILLTLAVFDTPQAI
                     ESSVFAMQALLGTAPFLILSIAIAAWAGATGADNLIAKAFTGAPILMIGLGALAGGIS
                     PFCSCGVIPLIAALLAMGVPLSAVMAFWLASPIMDPSMFVLTAGVLDFDFAVAKTIAA
                     VGLGIFGGAVVHLMMRSGAFANPLREGIGNGGCGGTKIRAPKPVVWQFWREADRRAIF
                     GKTALNTTLFLAKWLTLAFILESLMLAWIPAETVTAALGGQGLLPIATATLVGVPAYL
                     NGYAALPLVGGLIEQGMAPGAGMAFLVAGGVTSIPAAMAVWALARPPVFALYIVLSLS
                     GAFIAGLLFQVWASAGGI"
     gene            complement(4309..4626)
                     /locus_tag="VIC30_04085"
     CDS             complement(4309..4626)
                     /locus_tag="VIC30_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006408539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY7803597.1"
                     /translation="MTTTSRNARALAALGHDARLSIFRLLVKAGVDGLRVGDIGDHLG
                     LAPSTLAHHLSALVDAGLVLQGKQGREVFNRVDFAAMNHLVEFLTAECCVGVSVRSSE
                     EAA"
     gene            4796..>6002
                     /locus_tag="VIC30_04090"
     CDS             4796..>6002
                     /locus_tag="VIC30_04090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009553439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY7803598.1"
                     /translation="MTSLQAHIANVIQTVGLESLRHTAFDPQGHASRVTKDQVIQTSW
                     QRCIDEHRLDPTRMQEAVILPGVQLREHQDQMEAFLHIARHGLEALYQQVAGLGYCVL
                     LTDAHGVTVDFLGDLVFEPSLRKAGLYLGADWSENHAGTCGVGTCIATKQALTVHLDD
                     HFDATHIPLTCTASPVFDDQGVLKAVLDISALTSPSSKDSQHLALQMVKMYAAHIENA
                     SFLQRFSQHWVLRLSRAPQFLDVSPEYLLALDDEGRIAGHNRAAQLLFDQGSGVTLVG
                     KVLTEVINLPLQNLGRYMATRPVDQRAVTLPGSREMLFVLACAPPSPPAAKRVLNQTK
                     PELPAPMAQLSGGDPAFDRILERAARLVNSPVNILLTGETGTGKERMARALHDSSERR
                     HQPFVAVNCA"
BASE COUNT         1415 a         1581 c         1605 g         1401 t
ORIGIN      
        1 ataagaaacg cgctgttgcc ttcttcgcct tcccgtagga tcacatcgcc tgccttgaat
       61 ttgattgttt tcattgtttt tcctaaaagt ttagttaact gcgcttctta ctgaaccgaa
      121 attgataacg ccgcggtcca tctcgtgctc acgaatcatg ggtaatgtcg gtactgtaac
      181 ggcagtactg acgatgcggt agcccttaaa acaaccgatg gctcggcatt gatgcaggca
      241 gtgcgcaaac ctaaaactta tagtcaaccc tgtcaaaacg ttgtagatgc ttgcgctctg
      301 acgcctacgc cgttgcgttg gacttttacc aatctctaaa cgtatcttgc atttgccgtc
      361 actaaagacc gatgttgacc gtcgcgtcat ctgcttggcg caccggtaaa acagggatca
      421 ttagcgtatg tttatggaat tgatttaacc gcaaaagcgc taggtagacc gtaaattcat
      481 agctatccac taacttagca aaaaccggta gccactttct tgcaaaagct tgcaatcatg
      541 gtagttcaaa accggggtcg tgagctgtcg ggaaagcgtg tatgttaggc acctggcctc
      601 gagcgttggc taatcggtgg cagtgcgaat gggaagcggt gcgaacaggt actagtaccc
      661 atattccttg agcagacata tgaccggttt aattaatctg ccccctgaag tggtattcac
      721 gttaagaacc ggcactgtgc taaggtgagt tggtaaagat tgacttgcaa agcatcgcgc
      781 tttgcaagaa tacttatctt agtgggacct ctcgttgacc ttcagctaat cctggctggc
      841 acgatctagt cgcttcctct gagcttttat gcaaaggaac gactgtgttt aaaacgccgt
      901 ctctctcacc gcctgtcacc aagtccacca attcgcacaa gcccacgcgg ggcgctgcgg
      961 ttcgaccaac gccgatatca tcacctgata ctgagtcgca gtttgcaacc gccattgtgt
     1021 attgcgaagc gagctttggt gccgtggacg gtaaaaccgc caatggcctt atccgtcgct
     1081 cagagaagta tcaaatcatg tcggtcatcg acagcgagca ggtgggtcaa gacacgggca
     1141 tggtgcttga cggcaaagcg aacgacattc cgattagccg cgatcttgat aatgcgctcg
     1201 cgcaactggg ttttgtgcca gatgcgttta tttttgggat ggcaccagcc agtggtttgt
     1261 tgtctaaacg ccagcgtggt gtgattcttg aagcgatgag ccacggcatg gacatcgtca
     1321 atgggttgca cgagtttctc aatgacgacc cggtgtttgc cgcagcctgc cgcgcaaaca
     1381 acgtgacgat taatgatgtg cgtaagccca gggataaaaa agacctgcgc ttgttcagtg
     1441 gccgtattgc gcaggtaacc tgtccacgaa ttgcaattct agggactgat tgcgcgattg
     1501 gtaaaagaac cactgcgacg attctaacga gcgtgttaaa cgatcatggg ctaaaaactg
     1561 tcatgatcgg caccgggcaa actggtttga ttcagggggc tcgatacggc gttgctttag
     1621 atgcggtgcc ctcgcagttt tgcgccggtg agctcgaagc catcatcgtc gaagcatacg
     1681 aaaacgaaaa acccgatgtg attgtcatcg aaggccaggg cgccttgagt catccggcgt
     1741 tttcttcgtc cgcgtttatt ttgcggggca gttgcccaac cggtgtggtg ttgcaacacg
     1801 cacccaagcg ccatacgcgg tgcgactttg atcaaatgcc aatgccagat cctgcagccg
     1861 aaataaattt gatccaaacc tttgctgata cgaaagtgat tggtctgacg atcaatcatg
     1921 agtcaatgga tgacgctgag atcagcagcg ccattgagaa gtatgagcgc gagctgggca
     1981 ttgctgcgac cgacgcgctt agtcgaccgg ctgataagtt gcttgacatg gtggtatcag
     2041 catttccgga actgaagtgg aagttaactg gccacgcgtg atgcctgcgc ctcgcttaga
     2101 aattgatcta accaaaatac atcacaacgc cagccgactt gttgcgcaat tcgccttgca
     2161 aggcatagca atcactgggg tgtgtaaagc caccctaggc atggctgagg tagctaacac
     2221 cttgcgagac gcaggcgttc gttacctcgc ggactcccat atagaaaaca ttgagtcgat
     2281 gcgtcgtgat ggtgtgtgcg ccgagatggt gctgatccgc tcacccatgt taagtcaggt
     2341 ggcgcgcgtc gtggccgcgg ctgatgtcag ttttaatacc gagatcgacg tcatacgaca
     2401 tttgtcggcg gcggcacaaa aaaccaatcg agtgcatggc gtggttctga tggtagagct
     2461 cggtgatcgt cgcgaaggca tcatgccgca cgacgttttg gcaatggccc gtgaaacgtt
     2521 gcatctaccc aatctggtgc tcaaaggcat aggtaccaac ttggcgtgtc gcaatggcat
     2581 ttgccctgac gtgacaaaca tggccgagct atctgcctta gccgatttga ttgaggcgac
     2641 atttgaaata aagcttgagc ttgtgtccgg cggaaactcg gccaatgtcg actggggact
     2701 aagtcatgcc tcagctggcc gtatcaacaa cctgcggtta ggcgaatcca ttctattggg
     2761 ttgtgaaacc ttgcaacgtc aaccgatcgc tggtttgtac acggacgcgt ttaccttggt
     2821 agccgaagtc attgaatcga atatcaagcc ctccaagccg cggggcgtgg ctgctcaaac
     2881 cgcctttggc ggggttgcga ctgtattgga tcgcggcttg gtgatgcaat cgatcttggc
     2941 tattggacgc caggacattg atcctgatgg actggtcgcc ccgaccggca ttgaggtcat
     3001 gacagctagc agtgaccatt taatagtgga gtcagaggtc acgccgttgc cagtcggtgc
     3061 tgaagtggct ttccagctca attacacctc gttgctcttg gcaatgactt cgccgtttgt
     3121 ggctaagatc atcaaaatgg atccacggct gatgcctgtg tcggcacttt cgtctttgcc
     3181 gaatgcgtat cttgtgtctc agataccgcc tgcgctggcc cagacctgaa acagcaggcc
     3241 ggcaataaac gcgcctgata gtgacagtac gatgtacagc gcaaaaacgg gcggtctggc
     3301 taaagcccag actgccatgg ctgcagggat agaggtcaca ccgccagcca ccaggaaggc
     3361 catgcctgcg cctggcgcca tgccttgttc aatcagtccc ccaacaagcg gcagggccgc
     3421 atagccgttc agataggcgg gtacgcccac tagggtcgcc gtcgcaatgg gtagcagccc
     3481 ttggccgcct agtgccgccg tgactgtttc ggccggaatc catgccagca tcaggctctc
     3541 taatatgaaa gcaagcgtca gccacttggc caagaaaagc gtggtgttca acgccgtctt
     3601 accaaatatg gcgcgccggt cagcctcacg ccagaactgc caaacgaccg gcttgggcgc
     3661 gcggattttt gtgccaccgc aacccccgtt tccgatacct tcacgcaacg gattggcaaa
     3721 tgcaccactt cgcatcatca ggtgcactac ggcgccgcca aatataccga gtcccacggc
     3781 tgcaatggtc ttggccaccg cgaaatcaaa gtcaagcacg cctgcggtca gcacgaacat
     3841 cgacggatcc atgatgggcg acgcgagcca gaaggccatc accgccgaca gtggcacacc
     3901 catggccagt aacgcggcaa tcaaagggat caccccacaa gaacaaaaag gtgagatgcc
     3961 acctgctagg gcgccaagcc caatcatcag gatgggtgcg ccggtaaacg cctttgcgat
     4021 taagttgtcg gccccggtcg cgccggccca agcagcaatg gcgattgaaa gaatcagaaa
     4081 cggcgccgta cccaatagag cctgcattgc aaacaccgaa ctctcgatgg cttggggcgt
     4141 atcgaacaca gcgagtgtaa gcagaatcag cacagaggcg agccagactc gctcgtgttg
     4201 ccatgcatga cttagcgtgg atcgcaggct tggtgaagaa agggttgttt cattcatcac
     4261 tatatatcca gaaatgtagt tatttttaaa taaaaaaata ggcctggctc aggccgcctc
     4321 ttctgatgag cgcaccgata caccgacaca gcattcagca gtcaggaatt caaccaagtg
     4381 gttcatcgcc gcaaaatcca ctcgattgaa cacttcacgt ccttgtttgc cttgcagcac
     4441 caagccagcg tcaactagcg ctgaaagatg atgcgccagg gttgatggcg ctaatcccag
     4501 atgatcaccg atatcgccta cacgcagacc gtccacacca gctttcacca gtagccgaaa
     4561 aatcgacaaa cgggcatcgt ggccaagagc ggcgagtgca cgggcattgc ggctagttgt
     4621 cgtcatgctg aaattataac tatgtttcta gttttgtcga tatataaaga tgatcgtttt
     4681 tatttagtga ctgcgcgcat cctagggttg acacggtgtt tgcaactcga ctcatcatgt
     4741 accgtcaaat acgtgttctt ttgctggcag cgttaaacaa gtcgggggac ttttgatgac
     4801 ctctttacaa gcgcacatcg caaacgtcat tcagaccgtc gggcttgagt cattgcgaca
     4861 tacagcgttt gatccgcagg gtcacgccag tcgcgtcacc aaggaccaag tcattcaaac
     4921 atcttggcag cggtgcattg atgagcatcg tcttgatccg actcgcatgc aagaagccgt
     4981 gatcttgcct ggcgttcagt tacgcgaaca ccaagatcag atggaagcgt ttttgcatat
     5041 cgctcgtcac ggactcgagg cgttgtatca gcaagtggcc ggcctgggat attgtgtgtt
     5101 gttgaccgat gcccatggtg tcaccgtcga ttttttaggt gacttggtgt ttgaacctag
     5161 cctgcgtaag gctggactct atcttggcgc cgactggagc gagaaccatg caggcacctg
     5221 cggtgtggga acctgtattg ccacaaaaca agcactgacc gttcatctcg atgaccattt
     5281 tgatgccacg cacattccac tgacgtgtac tgcttcgccc gtatttgacg accaaggcgt
     5341 gcttaaagct gtgctcgaca tttcagcatt gacctcacct agtagtaaag acagtcagca
     5401 tttggcgctt cagatggtca agatgtatgc cgcccacata gagaacgcca gctttttgca
     5461 gcggtttagc cagcattggg tattgcgctt gagtcgcgca ccgcagttcc ttgatgttag
     5521 ccctgaatac ttgcttgcct tggatgacga ggggcgcatt gccggtcaca atcgggctgc
     5581 tcaactgttg tttgaccaag gctcaggtgt caccctcgtg ggtaaggtat tgaccgaagt
     5641 cattaacctg ccactgcaga atttaggccg ctacatggca acgcgaccag tagaccagcg
     5701 cgcagtcaca ttgcctggct ctcgcgagat gttgtttgtc ttggcgtgcg ccccgccgtc
     5761 accacccgcg gccaaacgcg tgctaaacca aacgaaacca gagcttcccg cacctatggc
     5821 gcaactgtct ggcggagatc ctgcatttga tcggatcttg gagcgggccg cgcgcttggt
     5881 gaactcaccg gtcaacattc tattgaccgg tgaaacgggc accggcaaag aacgcatggc
     5941 tcgtgcgttg cacgacagta gcgagcggcg ccatcaacca tttgtggcag tcaactgtgc
     6001 cg
//
LOCUS       DATBNL010000250         1574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_13008, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000250 DATBNL010000000
VERSION     DATBNL010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13008"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="VIC30_04095"
     CDS             <1..680
                     /locus_tag="VIC30_04095"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011829035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY7803599.1"
                     /translation="AALQTELDAVAGDESIKVVILAATGKAFCAGHDLKEMRAAPSQD
                     YYEGLFKQCTSVMMSIVRLPQPVIAQVEGVATAAGCQLVAMCDLAVSADTARFAVSGV
                     NLGLFCSTPSVALSRNVSRKHALYMLLTGEFIDAQTACDWGLINEIASAADVAQATEA
                     LAEKILKKPAPALRMGKRLFYEQVETNIERAYELAGQTMACNMMDETALEGVQAFIDK
                     RAPNWSN"
     gene            739..>1574
                     /locus_tag="VIC30_04100"
     CDS             739..>1574
                     /locus_tag="VIC30_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006577020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803600.1"
                     /translation="MAVQYQAPSDDMAFLIQHVVDSKTISQLPGCEEFTDDVIEAVLE
                     EAGKFNAGLISDLNTVSDNQGAKLGAEHTVQTPMGFKQAYEQYIEAGWNGLSGHPDFG
                     GQGLPELLATATNEMLHSACMSFGLCPMLTAGAIHAIDHHGSDQQKQTYLPHLVSGQW
                     AGTMNLTEPQAGSDLAAVTSKAVPKDDHYLISGIKIYITYGEHDLTENIIHLVLARLP
                     DAPAGGKGISLFIVPKFLVNDDGSLGARNDVKCISLEHKLGIHGSPTAVMSYGEDGGA
                     VG"
BASE COUNT          375 a          409 c          428 g          362 t
ORIGIN      
        1 tcgcagcctt gcaaaccgag cttgatgccg tcgctggcga cgagtcgatc aaggtggtca
       61 ttctggccgc cacaggcaaa gcgttttgtg ctggtcatga tctaaaggaa atgcgtgcgg
      121 cgccctcaca agactactac gaggggcttt ttaagcaatg cacgtcggtg atgatgagca
      181 tcgtgcgcct gccacaaccg gtgatcgccc aagtagaagg tgttgcgact gctgcaggct
      241 gtcaactcgt ggccatgtgc gacttggcgg tctcggctga caccgcccgg tttgctgttt
      301 ctggcgtgaa cttagggctg ttttgttcga cgccatcagt ggcactgtca cgcaacgtta
      361 gtcgtaaaca cgcgctttat atgctgctca cgggtgaatt cattgacgcg caaactgcct
      421 gcgactgggg gctgattaac gagatagcgt ccgcagctga cgttgctcaa gcaaccgagg
      481 cgttagctga aaaaatactt aagaaaccag cgcccgcctt acgcatgggc aagcgtttgt
      541 tttacgagca agtcgaaacg aacattgagc gcgcttatga attggccggt caaaccatgg
      601 cctgcaatat gatggatgag acggcacttg agggcgtaca agcctttatc gacaagcgcg
      661 cgccgaattg gtctaactga cgtttacttt tcatgacttc acgagccttt gcggctcacg
      721 cctttaagga ctagcatcat ggctgttcaa taccaagcac cttctgatga catggcattc
      781 ctgattcaac atgtggtcga ttcaaaaacc atcagtcaat tacctggctg tgaggaattc
      841 acagacgacg taattgaggc tgtgctcgag gaagcgggca agttcaatgc aggcctaatc
      901 tcggatctaa atactgtcag cgacaatcaa ggtgccaagc tcggtgctga gcataccgtt
      961 cagacaccaa tgggttttaa acaggcctac gagcagtaca tcgaagcggg ctggaacggg
     1021 ctgtcaggtc acccggattt tggggggcag ggattgccag aactgttagc cacagccacc
     1081 aatgaaatgc tgcatagcgc ctgcatgtcg tttggcttat gcccgatgct caccgccggc
     1141 gccatccatg cgattgacca ccacggcagc gaccaacaaa agcaaaccta cctgccccac
     1201 ctggtgtcag gacagtgggc cggcaccatg aacctgactg aaccacaagc aggttcagac
     1261 ttggcggctg tgactagcaa agccgtaccc aaagacgatc actacctcat ctctggcatc
     1321 aagatctaca ttacttatgg tgaacatgat ttaactgaga acatcattca tttggtattg
     1381 gctcgcttac ctgatgcgcc agcgggtggt aagggcattt cgctctttat cgtacccaag
     1441 ttcctggtca atgacgatgg ctctttgggc gcgcgcaacg atgtcaaatg catttcgctt
     1501 gagcacaagc taggtatcca cggcagcccg actgcggtca tgagttatgg cgaagacggt
     1561 ggtgcggttg ggta
//
LOCUS       DATBNL010000251         1790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_132555, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000251 DATBNL010000000
VERSION     DATBNL010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132555"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..612
                     /locus_tag="VIC30_04105"
     CDS             16..612
                     /locus_tag="VIC30_04105"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY7803601.1"
                     /translation="MGNTYDKYGSRNPIVKWLMHGFETSLSQLVSEAAPTSVHEVGCG
                     EGHWVLRWHVQGFMARGCDFSSDVIDLARANASEQDVSGLLFEQRSIYDLEPDRDAAD
                     LVVCCEVLEHLENPHAALERLKAVVHGHLIVSVPREPIWCALNLARGKYLGQWGNTPG
                     HLQHWSKRSFKKMIGQYFEIVQTRTPLPWTMLLCRPKA"
     gene            614..1483
                     /locus_tag="VIC30_04110"
     CDS             614..1483
                     /locus_tag="VIC30_04110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803602.1"
                     /translation="MSNKHRRVLSLLGTLLAVVGMVFVGWRLVQYSNELDLSRITPWQ
                     WVLVLLLSVLYGVGSLLLAVAWWQLLDFFGVRFCPLRTIRIYGVSQLAKYVPGNVFQF
                     AGRQALGMSNGIPAGPLAKSMLLELILIALAGLLFGYLVLPAWLPILSGAESVGLLIV
                     TAAAMAVSLYRQWAKSVAWAFLALVLFLWLSAAVFAILLDMVHDPPSQWLLMMGAFVL
                     AWLAGFVTPGAPAGVGVREMVLLVLLEGQVAPGLLLLAVLLGRLVTVLGDVWFFLGAL
                     ALPSHRKVVGHGV"
     gene            1473..>1790
                     /locus_tag="VIC30_04115"
     CDS             1473..>1790
                     /locus_tag="VIC30_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803603.1"
                     /translation="MVCSRRSVTRSTLMGLLAFMAVLLIHATVPFAMMPTLGQAVWSM
                     GFAESFAHGPWYEIYARHFGLPDPAPIAFGLAGAWPASVLIRLGLHPADAYVAVLAFW
                     LAVA"
BASE COUNT          304 a          405 c          555 g          526 t
ORIGIN      
        1 taaaacggcg ttgtggtggg caatacctat gacaaatatg ggtcacgtaa tcccatcgtc
       61 aaatggttaa tgcatgggtt tgaaaccagt ctgagtcaat tggtgagcga ggcggcgccg
      121 acctcagtgc atgaagtcgg atgtggtgaa ggccattggg tattgcgctg gcacgttcag
      181 gggtttatgg cccgtggttg tgacttctct agtgatgtta tagatcttgc tagagcgaat
      241 gctagcgaac aggatgtgtc aggtttgctt tttgagcaac gcagtatcta cgatttagag
      301 cctgatcgcg atgccgctga cctggtggtg tgttgtgaag tgttagagca cttagagaac
      361 ccccacgccg ccttagaacg cttaaaagcc gtggtgcatg ggcatctgat tgtcagtgtg
      421 ccgcgcgaac cgatttggtg tgcattgaat ctggcccgcg gcaaatacct tggtcagtgg
      481 ggaaacacgc ccggccatct gcagcattgg tctaagcgat cgtttaagaa gatgatcggt
      541 cagtacttcg agatcgttca aacccgtacc cccttgccgt ggaccatgtt gttgtgtcgt
      601 cccaaagcct gacatgtcaa acaagcatcg acgggttcta agtctgcttg gcaccttgct
      661 agccgtggta ggcatggtat ttgttggctg gcgactggtt caatacagta atgaacttga
      721 cctaagcagg ataacgccat ggcagtgggt cttggttttg ctgctaagcg tgctttacgg
      781 ggtcggcagt ctactgctgg ctgtggcttg gtggcaattg ctcgatttct ttggggttcg
      841 tttttgtccc ttgcggacga tccgcatcta cggcgtgtcg caattggcta aatatgtgcc
      901 aggcaatgtg ttccagtttg caggccgcca ggcgcttggt atgtccaacg gcataccggc
      961 cggtccgttg gccaaatcga tgttgctaga actgatcttg attgcattgg caggtctatt
     1021 atttggctac ctggtgttgc cggcttggtt gccaatttta tccggtgctg aaagcgttgg
     1081 tcttctgatc gtgactgcag cggctatggc cgtgagtcta tatcggcaat gggcgaagtc
     1141 ggtggcttgg gcgtttttgg cgttggtgct ctttttgtgg ctgtctgcag ccgtatttgc
     1201 gatattgctt gacatggtgc atgacccacc ctctcagtgg ttattgatga tgggggcgtt
     1261 tgtgctggct tggctggctg ggtttgtaac gccaggcgca cctgcaggtg tcggtgtgcg
     1321 tgaaatggtg ctgttggttt tgttggaagg gcaggttgca cccggtttgt tgcttttggc
     1381 ggtattgctt ggccgtttgg tcacggttct cggtgacgtt tggtttttcc taggcgcatt
     1441 ggcattgcct agccatcgta aggtcgttgg gcatggtgtg tagcaggcgt tcggtcaccc
     1501 gatccacttt gatgggctta ctggccttca tggcggtatt gctgattcac gccactgtcc
     1561 cgtttgccat gatgccgact ttaggccaag ccgtttggag catgggtttt gccgagtcct
     1621 ttgcgcacgg cccgtggtat gaaatttatg cgcgtcactt cggcttaccc gatccagcac
     1681 caattgcgtt tgggctggcc ggcgcctggc ctgccagtgt cttgattcgg ttgggcttgc
     1741 atccagccga tgcttatgtg gcggttctgg cgttttggct cgctgtggcg
//
LOCUS       DATBNL010000252         3066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_142432, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000252 DATBNL010000000
VERSION     DATBNL010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142432"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..645)
                     /gene="rnhA"
                     /locus_tag="VIC30_04120"
     CDS             complement(187..645)
                     /gene="rnhA"
                     /locus_tag="VIC30_04120"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEY7803604.1"
                     /translation="MANNEAAVEIWTDGACKGNPGTGGWGVLLKRAHQEKTLCGGEAN
                     TTNNRMELRAVIEALNALKRPCQVVLHTDSQYVQKGITEWLSNWKARGWRTAAKQPVK
                     NADLWRELDEAAARHQIDWRWVRGHDGDLGNERADELANEGVLAVAKSNS"
     gene            complement(663..1430)
                     /locus_tag="VIC30_04125"
     CDS             complement(663..1430)
                     /locus_tag="VIC30_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY7803605.1"
                     /translation="MSVNTQLPIVELQRWFDSPVGQYVHRWEQQRIDDMLVDVFGYRA
                     IQYGLADFNYLAANRMPFKAYAGPRKLSEPQRLGWQASVVCRAEELPFDTDSVDLLVL
                     PHTLETAEDQHLVLREAHRVLMPEGRLVVAGFNPWSLWGLRARMPWVSPWFPAGDEGE
                     LSPNRLKDWLKLLSFEIDRGYFGCYAPPCRSQKWLERFDFMDSAGDRWWPIFGATYVV
                     SAVKRVAGMRLITPVFKRKSRRRSARAAGVATQRQNT"
     gene            1458..2252
                     /gene="gloB"
                     /locus_tag="VIC30_04130"
     CDS             1458..2252
                     /gene="gloB"
                     /locus_tag="VIC30_04130"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEY7803606.1"
                     /translation="MSTSSTIRIRPIEAFSDNYIWLIENGTHAAVVDPGDALPVLDEL
                     ETSGLSLTAILLTHHHHDHVGGVLELLEAFDAKVFGPAGETLPACDVRLHEGDTVDLP
                     NLALSLRVLDVPGHTAGHIAYTGDIDHEPVLFCGDTLFVGGCGRLFEGTPAQMLDSLD
                     KFAELKSDTKVYCAHEYTLANLRWARAVEPDNTELAQLEQACLTRRERDQPTVPSTIG
                     TERACNPFMRARQASVAQAAQQWSGEQLATPVDVFAAIRQWKNNFK"
     gene            2256..>3066
                     /locus_tag="VIC30_04135"
     CDS             2256..>3066
                     /locus_tag="VIC30_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY7803607.1"
                     /translation="MTFLRRSSLFTTLLTLSLLAGCANLPDTGSGAEVTTRTVDLTRP
                     PFDVWERIRRGYAIPNLNTELSEQWTEYYANHPQSIQRMADRSGRYLYYIVDEINRRG
                     LPTELALLPFVESAYDPNAYSRAKASGLWQFIPSTGTAFELEQTWWRDQRRDPIASTN
                     AALDYLEYLYEYQGDWYLAFASYNWGEGSVRRALAKNERAGKPLDYRYIRMPRETQNY
                     VPKLQAIKNIIADPERYGVILPIINNEPYFVRVKKDRDIDLKVAAELAEMPV"
BASE COUNT          710 a          909 c          772 g          675 t
ORIGIN      
        1 caagtagaac cagcgagagg acaacgcgag atgatttgtt catgtcatta ccaaaatggc
       61 cagttacgaa caacgcgcgg tgcgcggtgc acaatacgca aggctcaacg cacaggattc
      121 aacacatccg gtagcgttgg cgtaactgac attgacgatc tgtgatgtta tagcaccgag
      181 tcaggcttaa ctatttgatt tagctacagc caaaacgcct tcattggcca attcatcggc
      241 ccgctcgttt cctaggtcac catcatgacc ccgcacccag cgccagtcaa tctggtgtcg
      301 cgctgcggct tcgtcaagct cgcgccacaa atcagcgttt ttgactggtt gtttagccgc
      361 ggtgcgccag ccacgcgctt tccagttgga taaccactcg gtgatgccct tttgaacata
      421 ctgagagtcg gtgtgcagta ccacttggca agggcgcttt aacgcattga gcgcttcaat
      481 cacagcgcgc agttccatac ggttattagt ggtgttggct tcgcctccgc agagggtttt
      541 ttcttgatgg gcgcgcttga gcaacacccc ccaacccccg gtacctggat tgcctttaca
      601 ggcgccatcg gtccagatct ctactgccgc ttcgttgttt gccatcttct ctcagttgct
      661 catcatgtgt tttgacgttg ggtggcaacg cccgcggcac gcgcactacg gcgtcgcgac
      721 ttacgtttga atactggcgt aattaaacgc atacccgcta cccgcttgac agccgacacc
      781 acgtaagtcg ccccaaagat cggccaccag cggtcgccgg ctgaatccat aaagtcaaac
      841 cgctcaagcc acttttggct gcgacacggc ggggcataac acccaaaata cccacgatcg
      901 atttcaaagg acaggagttt caaccagtct ttcaaccggt tcggtgacag ctcaccttcg
      961 tcaccggcag gaaaccaggg acttacccaa ggcatgcgtg cccgaagccc ccacaagctc
     1021 cacggattga atcccgccac gaccagcctt ccttcgggca tcagcacccg atgggcttct
     1081 cgcaagacca agtgctgatc ttcggcggtc tctaacgtgt gcggcaagac cagcaaatca
     1141 acactatcgg tgtcaaacgg cagctcttcg gctcgacaga ccacactggc ctgccaaccc
     1201 agacgctgcg gctcgcttag cttgcgaggt ccggcgtacg ctttaaaggg catccggttg
     1261 gcggccaggt agttaaagtc agccaaaccg tactgaatcg cgcgataacc aaagacatcg
     1321 acgagcatgt catcaatgcg ctgctgctcc caacggtgga catattgtcc aacggggctg
     1381 tcaaaccagc gttgcagctc tacaatgggt aattgagtat tgaccgacat acctgttcca
     1441 accttaagac tgcgaccatg tccactagct ccaccatccg aatccgtccc atcgaagcct
     1501 tctcggacaa ctacatctgg ctcattgaaa acggcacaca cgccgccgtc gttgacccag
     1561 gtgacgcact gcccgtgctc gatgaacttg agacctcggg tctgtcgctc accgctattc
     1621 tactcaccca tcaccaccac gaccacgtcg gtggcgtact cgaattgctc gaagcgttcg
     1681 atgcgaaagt ttttgggccg gccggtgaaa ccctgccagc ctgcgatgtc aggttgcacg
     1741 agggtgatac tgtcgatttg ccgaatctgg cactgtcgtt gcgtgtcctt gacgtgcctg
     1801 gtcacacagc cggtcacatt gcatataccg gcgacattga ccatgaaccg gtcttgtttt
     1861 gcggtgacac tttgtttgtt ggcggctgtg gacggctatt tgaagggaca ccggcccaga
     1921 tgctggattc gctggacaaa tttgctgaac ttaaaagcga caccaaagtc tactgtgcac
     1981 atgaatacac attggccaac ctgcgttggg cacgtgcggt cgagcctgat aacaccgaac
     2041 ttgcgcaact agagcaagcg tgtctgacca gacgcgagcg tgatcaaccg acagtgccgt
     2101 cgacgattgg tacagagaga gcctgtaacc cgtttatgcg ggcacgccaa gcgtcggtcg
     2161 cacaagccgc ccaacagtgg tcgggtgagc aactggcaac accggttgat gtgtttgccg
     2221 cgatccgcca atggaaaaac aactttaagt agcccatgac ttttttacgt cgcagttcgt
     2281 tatttacaac ccttctgacg ctatcactgc tagctggatg cgccaacctg ccagacaccg
     2341 gatccggtgc ggaggtcact actcgaacag tggacttaac ccggcctcct ttcgatgttt
     2401 gggagcgtat tcgccgcggc tacgccatcc ccaatctgaa caccgagctg tctgagcagt
     2461 ggactgagta ctacgccaac cacccacaat cgattcaacg catggccgat cgttctggtc
     2521 gctatctgta ctacatcgtc gatgagatca atcgtcgcgg cctgcccacc gaactggctc
     2581 tgctgccgtt tgttgaaagt gcctatgacc ccaacgccta ctcgcgtgcc aaagcatcag
     2641 ggctttggca gttcatccca agcaccggca cggcatttga gctcgagcaa acctggtggc
     2701 gcgatcaacg acgtgacccg attgcttcaa ccaacgctgc tttggattac cttgagtatc
     2761 tttatgaata ccagggcgac tggtacttgg cgtttgcctc ctacaactgg ggggaaggat
     2821 cggtgcgccg agcattagct aaaaatgaac gcgctggcaa accgctggat taccgctaca
     2881 tccgtatgcc gcgcgaaacc cagaactatg taccgaaatt gcaagccatc aaaaacatca
     2941 ttgccgatcc agagcgatac ggggtgatct tgcccatcat caataacgaa ccttattttg
     3001 tgcgagtaaa aaaagaccgc gacatcgacc tgaaagtagc cgccgaacta gctgaaatgc
     3061 cagtcg
//
LOCUS       DATBNL010000253         7739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_162533, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000253 DATBNL010000000
VERSION     DATBNL010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7739
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162533"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..674)
                     /locus_tag="VIC30_04140"
     CDS             complement(105..674)
                     /locus_tag="VIC30_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEY7803608.1"
                     /translation="MSSKDITYIALFTSLTTVFSIIPPIPMPVVPVPLTLQTLGLMLA
                     GLVLGPRLALLSMALYLLIALVGFPVLPGARSGLAVFAGPTGGFLLGFLPGAFVTGWM
                     AKRSAQLAQGERSGAQIFAGNLTAAILGGALTVYAVGVPWLAVISNIPMSEAVLAVAI
                     FMPGDVIKALIAAFVATRVAQLMPTAGDR"
     gene            complement(721..1347)
                     /locus_tag="VIC30_04145"
     CDS             complement(721..1347)
                     /locus_tag="VIC30_04145"
                     /inference="COORDINATES: protein motif:HMM:NF014420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     component T"
                     /protein_id="HEY7803609.1"
                     /translation="MNWGVDSDISSAQASWLSHWSAGTKLLILVVMASTFVLINHPLW
                     LGLSALFMLGVWRSVNGPVNWQDWRRVIWLAVTVTVVVSYVGFFSGVDQALVVLFRLL
                     ALLFAALAVVASTPVTDMMAAVQAALVPLGKLGWVNPAKVALAFGLTLRLIPVMLEQW
                     QEIRQAQAARGISAAPHALLVPMLARTIRRADELAEAIDARADSADFR"
     gene            complement(1344..2024)
                     /locus_tag="VIC30_04150"
     CDS             complement(1344..2024)
                     /locus_tag="VIC30_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803610.1"
                     /translation="MLIEFEDVTLERLGRTVLKDLNLSLLEHRIGIIGVNGAGKSSLA
                     RLINGLLTPTAGQVRVDGLDVQSQLTAVRQQVAFVFQNPDNQIVFPVVDEDMAFGLKA
                     ILPDKAARQARIESVLESLEMADLAKRPIQQLSGGQKQLVSLAGALCREPKLLVLDEP
                     TAQLDLRYRNRLLQILADLPQQALVLTHDLAMLSEFDRVLVVDRGHVVHDATPAVAIA
                     WYERRCQA"
     gene            2105..2509
                     /gene="msrB"
                     /locus_tag="VIC30_04155"
     CDS             2105..2509
                     /gene="msrB"
                     /locus_tag="VIC30_04155"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEY7803611.1"
                     /translation="MDKVTKSEDQWRAMLTPESFHVTRQKGTERAFTGEFWDHRALGI
                     YRCVCCGTALFASDTKFDAGCGWPSYFEPIAPEHVREETDRSHGMVRTEVLCNICDAH
                     LGHVFPDGPPPTGLRYCINSLSLTFEPRDDAT"
     gene            2506..3081
                     /locus_tag="VIC30_04160"
     CDS             2506..3081
                     /locus_tag="VIC30_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEY7803612.1"
                     /translation="MKKFLFDLFPLLLFFVAYRFADIYVATGVAMVAAIGQIAYIRLT
                     GQKIEPMHWINLVVIVVFGGATLWLQNEAFIKWKPTVLYWLFGAILVASQVIWGKNLL
                     QKLLNGKIELSPAGWSGLSLSWAGFFMFAGALNLFVAFSGYFSEAAWVNFKVFGLMGL
                     LVVFVIAQSMWLSKHMIADETEPKVHSDDQP"
     gene            3068..3328
                     /locus_tag="VIC30_04165"
     CDS             3068..3328
                     /locus_tag="VIC30_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEY7803613.1"
                     /translation="MTNPNETLLRERLMQLKPSMLEIDDESHLHAGHAGSQGGASHFR
                     VWIEADCFTGKHKVAQHRLVYDLVDDLMPFPIHALALQTSTP"
     gene            3341..4117
                     /locus_tag="VIC30_04170"
     CDS             3341..4117
                     /locus_tag="VIC30_04170"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015040246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY7803614.1"
                     /translation="MKRFAMLIAAATLAAPIYAQNIATVNGQPITQEAYEQFVELLGT
                     QGAPDSPELREQVKEEMINRLVMVQAAEKAGITNNPEVKTELELARQGILVRALMADY
                     LEKNPVTEEKVRAEYDKLQQEQGEVLEYNVRHILVEDEATANDLQKQLNDKSASFEEL
                     AKAQSKDPGSAAQGGSLGWASADNYVAPFAQAVQNTPKGQMTDKPVQTQFGWHVIEVV
                     DARPIAFPPFEEVRTQLEEMMRQQELMQFQQKLRSEAKID"
     gene            complement(4341..6395)
                     /gene="ligA"
                     /locus_tag="VIC30_04175"
                     /pseudo
     CDS             complement(4341..6395)
                     /gene="ligA"
                     /locus_tag="VIC30_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416756.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
     gene            complement(6403..7464)
                     /locus_tag="VIC30_04180"
     CDS             complement(6403..7464)
                     /locus_tag="VIC30_04180"
                     /inference="COORDINATES: protein motif:HMM:NF016257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HEY7803615.1"
                     /translation="MSELQISLIALGVLIILAIVGFNWWQDRRARRKMQDSLPDVGED
                     ALFSDSKSAAKDDRREPGLGNLGLTTNSAEQASEGEPGIEAPLVEPDSVIEAVIELHL
                     GQPLTGSELAVHLRDGLETGRRPVRVLLQTADGHLSNQLNAQQPYSTVQLAVLLANRA
                     GPITAIEWSQIWGKAQNLAEQLEATVDGPEQNDVLARADSLDSTCATLDAQVTLTLVL
                     RERRPVDDLVGSATAMGFVDRASHLAWIGDHGLEGFTLFRADGQPLDQAGSHVEQMTL
                     LLDVPRSPANPVSFARMMEVGQELGRRVGGEIVDDQGNPLSSGADVAIDQQLQALFAQ
                     LEAAGLTAGSERARRVFSG"
     gene            complement(7521..>7739)
                     /locus_tag="VIC30_04185"
     CDS             complement(7521..>7739)
                     /locus_tag="VIC30_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803616.1"
                     /translation="EVDAPLDDANTERYANLVSGMSEQTQFLFISHNKIAMQMAKHLI
                     GVTMQEQGVSRIVAVDIDSALQLAAEAA"
BASE COUNT         1822 a         2281 c         1974 g         1662 t
ORIGIN      
        1 aagccgatag tatcgttgag cacccaagcc atatttggga ctcgatacag acactaaacc
       61 aagccactta agcgccaatt acgtatccca gcagcaggct ttgactagcg atcacctgct
      121 gttggcatca attgtgcgac ccgtgtcgcc acaaaagcgg caatcaaggc cttgatgaca
      181 tcaccgggca tgaatatggc cacagccagc acggcttctg acatcggtat attgctgatg
      241 acggctaacc aaggcacacc cacggcatag acggttagcg caccgcctaa gatggccgcc
      301 gtcaggttgc ccgcaaatat ctgggcgccg ctacgctcac cttgcgccag ttgcgctgag
      361 cgtttggcca tccaaccggt gacaaacgcg ccaggtaaaa aacccagcaa aaacccgccc
      421 gttggtccgg caaacaccgc taacccgctg cgcgcgcccg gcaacaccgg aaaccccacc
      481 aacgcaatca acagatagag cgccatagac aacagcgcca gacggggccc aagcaccaag
      541 ccggccagca tcaaacccaa ggtctgcaat gtcagcggca ccggcaccac aggcatcgga
      601 atcggcggaa tgattgagaa caccgtggtc agcgaggtga acagcgcgat gtaggtgatg
      661 tctttggatg aaatcgatga cgacataaaa acgacccaag cgtatattgg attggcaaga
      721 ttacctgaag tcagcactat ccgcacgagc atcgatggct tcggctagct catcagcgcg
      781 tcggatcgtt cgagccagca tcggcaccaa tagcgcatgc ggggcagctg aaataccccg
      841 ggctgcctgg gcttggcgaa tctcttgcca ttgttcgagc atcactggga tgagtcgcaa
      901 ggttaaacca aaggccagcg ccactttcgc gggattaacc catcccaact tacctaaggg
      961 aaccagtgcg gcctgcacgg ctgccatcat gtctgtcact ggggtgctag cgaccaccgc
     1021 caaggcggca aacagcaaag ccaatagccg aaataacacc acgagcgctt ggtcaacacc
     1081 gctgaagaac cccacatagc tcacgacgac agtcaccgtc acggccaacc aaatcacccg
     1141 ccgccaatct tgccagttca cagggccgtt aacactgcgc cacaccccaa gcatgaacaa
     1201 ggcacttaga cccaaccaca acggatggtt aatcaacaca aacgtgctgg ccatcaccac
     1261 tagaatcaat aacttagtgc cagcagacca atggctgagc cacgatgctt gcgcgctgga
     1321 aatatcggaa tcaactcccc agttcatgct tggcagcgcc tctcgtacca ggcgatggcc
     1381 acggccggtg tggcatcgtg caccacgtgg ccacggtcaa cgaccaacac acgatcaaat
     1441 tcgctaagca tcgccaaatc atgtgtcagc accaaggcct gttgcggcaa gtccgccaga
     1501 atctgcaaca gtcggttgcg ataacgcaga tcaagctggg cggtgggctc atcaagcacc
     1561 agtagcttgg gctcacgaca caaggcgcca gccaagctca cgagttgctt ttgtccgccg
     1621 gagagctgct gtatgggcct tttagccaga tcggccattt ccaaggattc taaaaccgac
     1681 tcaatgcgcg cttggcgagc agctttgtcc ggcaggattg cctttaagcc aaacgccatg
     1741 tcttcatcga ccaccggaaa cacaatttga ttgtcggggt tctgaaacac aaacgccacc
     1801 tgctgacgca ccgccgtcaa ctgtgattgc acatctaacc catcgactcg cacttgaccc
     1861 gcggttggtg tgagcagccc gttgataagc cgagcgagcg agcttttacc cgcaccgtta
     1921 accccgataa tgcctattct gtgctctaga aggctaagat tcaggtcttt aagcaccgtg
     1981 cggcctaagc gttcaagcgt gacgtcttca aactcgatta acatggcaac acggattcga
     2041 tggcaacagc gtcgcgagtc aaagactcgt tgacaacaac aagagggttc acattaatac
     2101 gcctatggat aaggtcacaa agtcagaaga tcaatggcgt gccatgttaa cgcctgaaag
     2161 ctttcatgtt acccgtcaaa aaggcaccga gcgcgccttt accggcgaat tctgggatca
     2221 ccgtgcactt ggcatttacc gctgcgtctg ttgtggcacg gctttgtttg cctctgacac
     2281 caagtttgat gcgggctgtg gatggccaag ttattttgag cccatcgcac cggagcacgt
     2341 gcgcgaagaa acagaccgca gtcacggtat ggtgcgcacc gaagtgctgt gcaacatctg
     2401 tgacgcgcat ctcgggcacg tcttccccga cggcccacca ccgactgggc tgcgctattg
     2461 catcaactcg ttgtcactga cgtttgaacc gcgggacgat gccacatgaa gaagttcctg
     2521 tttgatctgt tcccgttact gctgtttttt gtggcctacc ggtttgccga tatttacgtc
     2581 gccacgggtg tggccatggt cgcggccatt gggcaaatcg cctatatccg cctgaccggt
     2641 caaaaaatcg agcccatgca ctggattaat ctggtggtca ttgtggtgtt tggcggcgcc
     2701 accttgtggc tacaaaacga ggcgttcatc aaatggaagc ccaccgtgtt gtactggttg
     2761 tttggcgcaa tcttggtggc tagtcaggtg atttggggca aaaacctcct acagaagctg
     2821 ctgaacggca aaatagagct ctcgcctgcc ggttggagtg ggttaagtct gagttgggcc
     2881 gggtttttta tgtttgccgg tgccctgaac ctatttgtgg ctttctcggg ctacttcagc
     2941 gaagcggcct gggtcaactt caaagtattt ggcttgatgg gactgctcgt ggtgtttgtc
     3001 attgcccagt ccatgtggct tagcaaacac atgatcgccg atgaaacgga accaaaggtg
     3061 cattctgatg accaacccta atgagacatt gttgcgcgag cgcttaatgc agctcaaacc
     3121 ctccatgctg gaaatcgatg acgagtcaca cctgcacgcc ggccatgccg gcagtcaagg
     3181 tggcgcgagt cacttccgtg tctggataga ggccgactgc tttactggca agcacaaggt
     3241 ggctcaacac cgtctggtgt acgatttggt tgatgacctg atgccatttc cgatacacgc
     3301 attggctttg caaacatcca cgccctaaaa aaggaacttc atgaaacgtt ttgctatgtt
     3361 gatcgctgct gccacgttgg ctgcacctat ctatgcccag aatattgcca ctgtcaacgg
     3421 ccagcccatc acccaagagg cctatgagca gtttgttgaa ttacttggca cacaaggcgc
     3481 gcctgactca ccggagttac gtgagcaagt caaagaggaa atgatcaacc gtctggtcat
     3541 ggtgcaagcc gctgaaaaag ccggcatcac caacaaccct gaggttaaaa cggaactcga
     3601 gctcgcccga caaggcattc tggtacgcgc cctgatggca gactatctgg aaaaaaatcc
     3661 agtcactgaa gagaaagttc gcgccgaata cgacaagctc caacaagagc aaggcgaggt
     3721 tctggaatac aacgtgcgcc acatcctcgt tgaagacgaa gccacggcca atgaccttca
     3781 aaagcagctg aacgacaaat ctgcctcgtt tgaagagttg gccaaagccc aatccaaaga
     3841 cccaggcagc gccgctcaag gtggcagcct cggttgggcg tcagctgaca actacgttgc
     3901 cccgtttgcc caagccgtac aaaacacgcc caaagggcaa atgaccgaca aaccggtaca
     3961 gacccagttt ggctggcacg tcattgaagt ggttgatgct cgccccatcg ctttcccgcc
     4021 ctttgaagaa gtgcgcaccc agctcgaaga gatgatgcgc cagcaagagc tcatgcaatt
     4081 ccaacaaaag ctcagaagcg aagccaaaat agactaacgt tcttgcggct gttcaacaca
     4141 aagggctgct taaagcagct ctttgtgttt tgggattctg ttatgtgatt ctgttatgtg
     4201 attctgttgt gtggttttgt ggtgcgattc tgtgaacact ttcttgccgt gatcaacgat
     4261 tgcctcacca catcactgcg ctcgaatcac tgattcctga tcccagtacc taattcctat
     4321 tccctaatcc ctaatcccag ctagcgttgc aacaacgccc gtaatgccgc ttcatcaaga
     4381 atagcgacac cgagtgattg ggccttctcc agtttgctgc ctgcctcttc tcctgccacc
     4441 acgtagctgg tttttttaga gactgagcca ctgactttgc caccagcggc catgatggct
     4501 tgcgatgcct cttcacgcgt ccaattcggt agtgtgccgg ttagaacaaa tgtctgcccc
     4561 gacaggtcta ttgctccacc ggtaggcacc tcgggggctt gcggttcaac cccggcctct
     4621 atcagcttgg caatcacctc gcggttgtgt ggctcgctaa agaaatgggc aatcgacgct
     4681 gccaccaccg gaccaacatc aggtactgac aagagagacg cctcatcggc agccatcaaa
     4741 gcttcgattg actggaaatg acgtgccaag tcgcgtgctg tggtttcacc gacgtgccgg
     4801 atgcccaagg catagatcaa cctttccagt gcaggcttgc gtgctttatc aatggcgcta
     4861 atgacgttgc gtgcagatgt ctggcccatg cgctcgtaac cagccaattc ttcggcattt
     4921 aagccaaaca gatcagccaa gctatgcaca cgtcccttgt ctaccagctg ttcaatgagt
     4981 ttgtcaccca aaccatcgat atcaagtgcc ttgcgcgagg cagcatgtat caagctttgc
     5041 ttacgctgcg caccacacac caacccacct gtgcagcggg ccactgactc accttcgggc
     5101 ctttcaatgg cgctgccaca taccggacat tgcgaaacca tttgaaacag tgtggctgac
     5161 tctggacgtt agtctaatac cgggccgagc acttccggaa tcacgtcgcc ggcacgccgc
     5221 acaatcaccg tgtcgccaat gcgcacgtct ttgcgacgga tttcatcttc gttatgcaag
     5281 gtggcgttcg tcacggttac gccacccaca aacaccggtg cgagtcttgc taccggtgtg
     5341 attgccccgg tgcgcccaac ctgtaagtcg atgcccaaca gtcgagtctg cgcctgctca
     5401 gcggcgaact tgtgcgctag cgcaaagcgc ggcgctttgg ccacaaaccc gagtgttttt
     5461 tgtgcggcca agacgttgac cttgtagacc acaccatcaa tgtcgtaggc cagattcgga
     5521 cgcttggcat tgacctcgcc gtagaatttc aacagaccgg ctgcgcctga aaccaaggcg
     5581 tgttccgact ggttaacggg caacccgagc tcggcaatcc agtcaagcat cttggcgtgc
     5641 gtgtcaggta aagccgcact gacctcaccc catccatacg caaaaaaccg tagtggccga
     5701 gtggccgtga ccttagaatc aagctgtcgc aaactacctg ctgcggcatt gcgtggattg
     5761 acaaacactt tgtcaccgcg cgcggcctgg cgctggttaa gcagttcaaa gtcggcatga
     5821 tccatgaaca cttcgccgcg gacctcaagc acatcaggta cccctaagaa gtttgatccc
     5881 ttgccctgca gctttaacgg aatcgcggca atcgtgcgca cgttgtgcgt gacgtcctca
     5941 ccagtctggc catcaccgcg agtcgcagcg cgcaccagca cgccatgctc gtagcgcagg
     6001 ctcaaggcca gtccgtcgag ctttaactca caaaagtact gaacctgacc atcaactggg
     6061 agctgcccca cctgcttaag cgtctggctg acacgttgat caaaggcggc cacttcctca
     6121 tcatcaaacg cattgcctaa ggacaacatg ggtacagcat gacgcaccgg ctcaaatgcc
     6181 tcgagtgctt taccaccgac gcgcaatgtt ggtgaatccg gggtttgtag ctcggtgtat
     6241 tgcgcctcaa gtgcctgaag ctcacgcatc aaagcgtcat actcggcatc agacaccgtg
     6301 ggcgcatcta actcatagta agcgtggttg tgctggtgca gcagctcact tagctggctt
     6361 gcgcgcgctc ggacctcttg gggagtactg gccatgcctc ttttacccgg agaacactcg
     6421 acgcgcgcgc tcgctaccgg ctgtaaggcc tgcagcctct agctgagcaa agagtgcttg
     6481 cagctgctgg tcgatagcga cgtcggcccc agatgagagt gggttgccct gatcatcaac
     6541 aatctcgcca cccacgcgcc gaccgagttc ttggccgact tccatcatcc gcgcaaaact
     6601 caccggattg gctgggctac gtggcacatc aagcagcaat gtcatttgtt ccacatggct
     6661 gcccgcctga tcgagaggtt ggccatcggc gcgaaacagc gtgaagccct ccaagccatg
     6721 atcgcctatc caggccaagt ggctggcacg gtccacaaac cccatggccg ttgcgctacc
     6781 gaccagatca tcaacggggc ggcgttcacg cagcaccagt gttagcgtca cttgggcgtc
     6841 gagcgtggca catgtactgt caaggctatc agcgcgcgcc aagacgtcat tttgttccgg
     6901 gccatcaacg gtggcttcta actgctcagc caggttttgc gccttacccc agatttgtga
     6961 ccactcaatg gcagtaatcg gtccggctcg gttggccagt aagaccgcga gttgtaccgt
     7021 actgtagggc tgctgcgcat tgagctgatt ggacaaatga ccatctgccg tttgcaacag
     7081 cacgcgcacc gggcgtcgtc ctgtttcgag accatcacgc aaatgaacgg ctaattcgct
     7141 acccgttaag ggttgaccca aatgtaattc aatcaccgct tcgatgaccg agtcgggttc
     7201 aaccaagggt gcctcgatac cgggctcgcc ttcggacgct tgctcggcgc tgtttgttgt
     7261 taggcctaga ttacccagac ccggttcgcg tcgatcgtct ttggcagcgc ttttgctgtc
     7321 gctaaacagc gcgtcttcac caacatcggg caagctgtct tgcatcttgc gtcgggcacg
     7381 acggtcttgc caccaattaa acccaacaat cgccagaatg attagcacgc ccagcgcgat
     7441 caagctgatt tgcaactcac tcatgcgtta atgctcctca tcaacaaacc caccgttggg
     7501 cttaactgta cgaatcacca tcaggctgcc tcggcggcca attgcaacgc cgagtcaata
     7561 tccactgcca cgatacgcga aacgccttgc tcttgcatgg tcacaccaat caagtgcttg
     7621 gccatttgca tggcaatctt gttgtgcgaa ataaacaaaa actgtgtctg ctcactcatg
     7681 ccactgacca agttggcata gcgctcggta ttggcatcat ccagtggcgc atcaacctc
//
LOCUS       DATBNL010000254         2846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_32894, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000254 DATBNL010000000
VERSION     DATBNL010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32894"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1052)
                     /locus_tag="VIC30_04190"
     CDS             complement(219..1052)
                     /locus_tag="VIC30_04190"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HEY7803617.1"
                     /translation="MSVSTSSTRDAALNLVHSSKFTNFILGVILFNAVILGMQTAKET
                     LASWQGVLFVLDKACLAIFVVELLIRLYAWRGRFFKDPWSIFDLTVVVIALVPASGPL
                     AVLRALRVLRVLRVLTIVPSMRRVVSALLGALPGLGAISMLLMLIYYVFAVIATDIFG
                     EQFPDWFGSIGLSLYTLFQVMTLESWSMGISRPVMETYPYAWLFFVPFILVATFTILN
                     LFIAIIVNAMQTFAEQDHAAERQAEVDEADRREALLQSQLTAIRQELRELKQAVTQQS
                     K"
     gene            1332..2036
                     /locus_tag="VIC30_04195"
     CDS             1332..2036
                     /locus_tag="VIC30_04195"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY7803618.1"
                     /translation="MSNAPRPSPSRPLSLLIFLGSARQSSPPAPARLGSRVTMACQRL
                     LVAQGTSAEVIDPLNAPLDPVFKPHFAYATGRAPDALETLALKIQAADGYVMVSPEYN
                     HAMSPALANLLNHFGSSLFAFKPSAIVTYSAGQWGGARAAVNMRTFLSELGCLPVSAM
                     VHVPHAQDVLDEHGQYIDQNKAADWDGYFARTLSQLLWWCDAARAQREQPTLTTTQRP
                     PAFKTSPAERDAPGNG"
     gene            complement(2095..2565)
                     /locus_tag="VIC30_04200"
     CDS             complement(2095..2565)
                     /locus_tag="VIC30_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011829311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEY7803619.1"
                     /translation="MLYDVLKTVHVLSIILWVGGMMFALWFMRPAMLQVEQQPRLTAV
                     NDAMGRFFKTVLIASLLALVTGYWMLGRVAKQTVQAGLSFEMPLGWWVMAVLGTLMVA
                     IFMHIRFALYKRLRDAVQFGAWDKAAPALAKIQSWVAVNLGLGLAIILAVYLLR"
BASE COUNT          752 a          823 c          681 g          590 t
ORIGIN      
        1 cgttaccgat ggaataacca aacacacctt tgttccacac ttcgagaaca attttccaga
       61 attcgttaaa ttgcgttgtt acctcattca tcggtcaatc tcgtcttggt tagtgtgacc
      121 gtgtcggtca gagggttaca aactgcagta gcaaaccgga atgccgaacc cgtataccaa
      181 accagcccgt ctagtttacc caaccgttcg tgtcagtgtc atttcgactg ttgtgtgacc
      241 gcctgtttta actcccgtag ctcttggcga atcgctgtga gctgcgactg caggagcgct
      301 tcccggcgat ccgcctcatc aacctcggcc tgccgctcgg cagcgtggtc ttgctcagca
      361 aacgtctgca tggcattgac gatgatcgca atgaacaaat tcaggatagt gaacgtggcc
      421 accagaataa atggcacaaa aaacagccac gcataagggt aggtctccat gaccggccgc
      481 gaaataccca tggaccagct ctcaagtgtc atcacttgga acaaggtgta gagcgacagg
      541 ccaatcgagc caaaccaatc cggaaactgt tcaccgaaga tgtccgtggc aatcacggca
      601 aacacgtaat aaatcaacat caagagcatg ctgatggcac ctaggcccgg caaagcgcca
      661 agtaaagcag aaaccacgcg acgcatggaa ggcacgatgg tgagcactcg taacacacgc
      721 aacacccgaa gcgcgcgcaa gacagccaag ggacctgagg ctggcaccag cgcgatcacg
      781 accactgtca gatcaaaaat gctccatggg tctttaaaaa accgtcctcg ccaggcatat
      841 aaccgaatca gtagttccac aacaaaaatc gccagacagg ccttgtcgag cacgaacaac
      901 accccttgcc agctcgcaag cgtctctttg gccgtttgca tgcctaagat gaccgcatta
      961 aagaggatga caccaagaat aaagttggtg aactttgatg agtgcaccag attcagtgca
     1021 gcatcacgcg tcgatgacgt gctcacagac atgcaagaaa tctccagaca aatgcagaat
     1081 cgatcacatg ttaagggcta ttttccgtag cgcaagacgc ttttacgaag attgccacgc
     1141 gattggcgtc gaatcgaacc cgctagcctc gatacactgg gcaaataata tccccatcac
     1201 acacgcacaa tacttcgact actcaatggt ttacctactt ccctgcggtg ggtatattgc
     1261 cacagaccag tcatcttgcg acacacctgc gtgcaagctg cgttttaacc atctatgttt
     1321 aaggcccgtt agtgtcaaac gctccccgcc caagcccatc acgccccctg tctttattga
     1381 tctttttagg ctcagccaga caaagcagcc cacccgcacc ggcgcgtctt gggtcgcggg
     1441 tcacgatggc ttgccaacgc ttacttgtcg cccaagggac gtctgcggag gttatcgacc
     1501 cgctcaatgc acccctagac ccggttttta aaccgcactt tgcttacgct acaggcagag
     1561 cccctgacgc actagaaaca ttggcactaa aaatccaagc agccgatggc tatgtcatgg
     1621 tgagcccgga atacaaccac gccatgagcc ctgcactggc taacctgctc aatcactttg
     1681 gtagttcact gtttgctttc aaaccaagcg ccatcgtgac ctactcagcc ggccaatggg
     1741 gtggtgcaag agcagctgtg aacatgcgca cgttcttatc tgaactgggc tgcctgcccg
     1801 tctcagccat ggtgcacgtg ccgcatgctc aagacgtact cgatgagcat gggcaatata
     1861 tcgatcagaa taaagctgcc gactgggatg ggtattttgc gcgtacgcta agtcagctct
     1921 tgtggtggtg cgacgccgcc cgcgcacagc gcgagcaacc cacattgacc acaacgcaaa
     1981 gaccgccagc gtttaaaacc tcgcccgctg agcgcgatgc gccaggcaac ggttagcggt
     2041 acacgggcat ggtctaagca ccatgcccgt gctgttaaaa ccgcttatag gcctctagcg
     2101 cagcagataa accgccaaga tgatggctaa gcctaaacca aggttcactg ccacccaaga
     2161 ctggatttta gctagagcag gtgctgcctt atcccaggca ccgaactgca cagcgtcacg
     2221 tagtcgtttg tacagcgcaa atcggatgtg cataaaaatg gccaccatta gcgtaccgag
     2281 cacagccatg acccaccaac ctaacggcat ttcaaacgac aagccagctt gcacggtctg
     2341 cttggccacg cgacccagca tccagtaacc cgtcaccagt gccaataacg acgcaatcaa
     2401 cacggtctta aaaaaccgcc ccatggcatc gttgacagcc gtcaggcgtg gctgttgctc
     2461 gacttgcaac atggccggac gcataaacca caaggcgaac atcatgccgc ccacccaaag
     2521 gatgatcgac aacacatgga ccgtcttaag cacatcgtaa agcatccgtt tctccaaaaa
     2581 aatcaagcga ctagcgaata taagcttcga atcgtacgcc attattgcgt ctaacgtgca
     2641 atagcccgac aaaatctccg acaaacccgc gacgagggtt cttccaagcc tctaaagtca
     2701 gttaaccttt gatccctagg cgcttgggca atggttggaa atcggcgtgc ctgccttggt
     2761 cgttttagta ggagcgagat gtgaagatca atgagcaagt tgtactggtg actggtggtg
     2821 ctcggggttt ggggcggtcc attagt
//
LOCUS       DATBNL010000255         1668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_132574, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000255 DATBNL010000000
VERSION     DATBNL010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132574"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1465)
                     /locus_tag="VIC30_04205"
     CDS             complement(<1..1465)
                     /locus_tag="VIC30_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009460831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7803620.1"
                     /translation="MILSDICIKRPVFASVLSIVVVAIGLVSYDRLTVREYPNIDEPV
                     VSVSTTYQGASPEVMETRVTTPLEDRISGIEGVRLMTSSSRAERSNINVVFDLTRDPD
                     AAAAEVRDKVSRARRSLPDEVDEPIISKVEADSRPIMYIAIKAGDMSPMAATDYIDRY
                     VISRLSVLPGAAEVRFYGAREPSMRVNVDRTQLAAYNLTVQDVENALRAQNVTIPAGR
                     IESDAREFSVVSSTDLTTEEQFRNVVIANVEGYPVRLQEVADVNILPLSERRTARYNG
                     VESLNLGIVKQATANPLELSAAVRAEIEQINQTLPPGMELIPSYDSSVFIEKSIESVF
                     ITIAEAVVLVILVIFFFLRSVRASLIPIVTIPVSLIGAFALMYLFGFSINTLTLLAMV
                     LAIGLVVDDAIVVLENVYRYIEKGMTPVQAAFKGTREIAFPVIAMTLTLVTVYAPLAF
                     STGRTGRLFIEFALTLAGAVLVSGFVALTLTPMMCSRM"
     gene            complement(1462..>1668)
                     /locus_tag="VIC30_04210"
     CDS             complement(1462..>1668)
                     /locus_tag="VIC30_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803621.1"
                     /translation="RVAITIGERRAGLVEVIEGLAAGDQVVVAGLQRMRPGAAVTPQG
                     DARSASDVANAARNSAESLRVNPS"
BASE COUNT          410 a          489 c          427 g          342 t
ORIGIN      
        1 acatacgaga gcacatcatg ggtgtgagtg tcagtgcaac aaagcccgac accaagaccg
       61 ctccggccag cgtcaaggca aactcaataa acaatctgcc agttcgaccg gtagaaaacg
      121 ccagcggcgc gtagaccgtg accaaggtta aggtcatggc aatcaccgga aaggcgattt
      181 cacgcgtgcc tttgaacgcc gcttgtaccg gcgtcatgcc tttttcaata tagcggtaga
      241 cgttttctag tacgacaatg gcgtcatcaa ccaccaagcc aattgccaac accatggcta
      301 gcagcgttag cgtgttgatc gagaacccga acaggtacat cagcgcaaaa gcgccgatca
      361 aagagaccgg aatggtgacg attgggatca gactggcacg cacacttctc agaaaaaaga
      421 aaatcaccag gatcacgagc accaccgctt cagcgatggt tatgaacact gattcgattg
      481 acttctcgat aaacaccgaa ctgtcatacg agggaatcag ttccatgcca ggtggcagtg
      541 tttggttgat ttgttcgatt tcagcgcgta ctgccgccga caactccagc gggttggctg
      601 tggcctgctt aacaatcccg aggtttagcg actccacgcc gttatatcgc gcagtgcgtc
      661 tctcacttag cggcaagata ttgacatcag ccacctcttg caaacgcacc ggatatccct
      721 ctacgttggc aatcaccaca ttccgaaact gctcttccgt ggtcagatcg gtggacgaca
      781 ccacggagaa ctctcgcgcg tcagactcaa tacggccagc tggaatcgtg acgttctgtg
      841 cccttagcgc gttctcgaca tcctgaaccg tcaggttgta ggctgccaac tgggtgcgat
      901 caacattgac acgcatggac ggctcgcgcg ccccataaaa acgcacttca gctgcacctg
      961 gcaacaccga caagcgggaa atgacgtaac gatcaatgta gtccgttgcc gccatcggtg
     1021 acatatcacc ggctttaatt gcgatgtaca tgatgggccg ggagtcagcc tcgaccttag
     1081 agatgatcgg ctcatcgact tcatctggca atgaccggcg ggcgcgcgag accttgtctc
     1141 gcacttcagc tgcggccgca tcggggtcac gcgttaaatc aaacacgacg ttgatgttgc
     1201 tgcgctctgc tcggctgctt gacgtcatca gccgcacacc ttcaatacca gagattctgt
     1261 cttcaagcgg cgtggtaact cgggtctcca tgacctcggg tgatgcgccc tggtaggtgg
     1321 tgctcactga caccacaggc tcatcgatgt tggggtactc ccgaacggtc aatcggtcat
     1381 aggacaccaa accaatggcc accaccacga tagacagcac cgaggcaaat acaggtcttt
     1441 taatacagat gtcagaaaga atcatgacgg gttcacacgc aatgactcag cactgttacg
     1501 ggcggcgttg gctacatcac ttgctgagcg cgcatcacct tgtggtgtca cagcggcacc
     1561 tgggcgcatg cgctgcagcc ctgcgaccac cacctgatcg ccagcggcca gaccctcaat
     1621 gacttccaca agcccagcac gtcgctcacc aatcgtgatc gcgacacg
//
LOCUS       DATBNL010000256         2103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52902, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000256 DATBNL010000000
VERSION     DATBNL010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52902"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1460)
                     /locus_tag="VIC30_04215"
     CDS             complement(<1..1460)
                     /locus_tag="VIC30_04215"
                     /inference="COORDINATES: protein motif:HMM:NF027825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HEY7803622.1"
                     /translation="MDKKDMLSQMRSRLSMAIGAFSESRDSELDDLRFMAGSPDNNWQ
                     WPADVLATRGSVQGQTINARPCLTINKLPQHVRQVTNMQRQNRPTGKVIPADDDADME
                     LAEIFDGIVRHIEYISDADVAYDTACENQVTFGEGYIRLVTEYCDPDSFDQDIKIMRV
                     RNSFSVYMDPTIQDPCGSDAKWCLITEDLLKEDYERMYPDAMPVSSIQAQGVGDQAIS
                     QWLAEDTIRIAEYFYYEEERTTLNLYPGNVTAFAGSREAKGLEEMGLIPVRKRDTIKK
                     KVKWVKTNGYEVLEEQDWAGKYIPVIRVVGNEFEVEGRMYLSGLVRNAKDAQRMYNYW
                     VSQETEMLALAPKAPFIGYGGQFEGYEYQWKTANTNNWPYLEVNPDVTDGQGNMLPLP
                     QRAPPPLAQTGLIQAKMGASDDIKATTGQYDSSLGATSNERSGRAIIARERQADTGTF
                     HYVDNLARAIRYTTRQLVDLIPKIYDTQRIARIIGV"
     gene            complement(1606..1785)
                     /locus_tag="VIC30_04220"
     CDS             complement(1606..1785)
                     /locus_tag="VIC30_04220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803623.1"
                     /translation="MSTKPGLYTNIHRKRERIKAGSGEKMRKPGSPGAPTAKAFKESA
                     KTAKTPSKSAKKGKA"
BASE COUNT          391 a          587 c          565 g          560 t
ORIGIN      
        1 tccacgccaa taatgcgggc aatgcgctgg gtgtcgtaaa tcttaggaat caaatcgacg
       61 agctgtcggg ttgtgtagcg aatggcccga gccagattgt caacgtagtg gaaagtgccg
      121 gtgtcagcct gacgctcacg cgcaataatg gccctgcctg agcgctcgtt gctggtcgcc
      181 ccgaggcttg agtcgtactg acctgtggtg gccttgatgt cgtctgaggc gcccatcttg
      241 gcctgtatta gcccggtctg tgccagaggt gggggcgcac gttgcggcaa gggcaacata
      301 ttgccttggc cgtcggttac gtcaggatta acctctaggt acggccagtt attcgtgttg
      361 gcggtcttcc actggtactc gtagccctca aactgaccac cgtagccaat aaagggtgct
      421 ttaggtgcca atgccagcat ctcggtttct tggctgaccc agtagttata catgcgctgg
      481 gcgtccttgg cgttacgcac aaggcccgac aggtacatgc gaccttcaac ttcaaattcg
      541 ttgcccacca cgcggatcac ggggatgtac ttaccggccc agtcttgctc ttcaagcacc
      601 tcgtagccgt tggtcttgac ccacttgacc ttcttcttga tggtgtcgcg cttgcgtact
      661 gggatcaggc ccatctcttc aagacccttg gcctcgcggc tacctgcaaa ggcggtcacg
      721 ttgccggggt acaagttcag tgtggtgcgc tcttcttcat agtagaagta ttcagcaatg
      781 cggatcgtgt cttcagccag ccattgcgag atggcctgat cgcccacgcc ttgcgcttgg
      841 atcgaggaca caggcatcgc gtcggggtac atgcgctcgt agtcttcttt cagcagatcc
      901 tcagtaatca agcaccactt ggcgtccgag ccgcaggggt cttgaatggt gggatccatg
      961 taaaccgaga acgagttacg cacccgcatg atcttgatgt cttgatcgaa gctgtcgggg
     1021 tcgcagtatt ccgtaaccag acggatatag ccttcaccga acgtgacttg gttctcgcag
     1081 gccgtgtcgt aggctacgtc agcgtcggaa atatactcaa tatggcgcac aatgccatcg
     1141 aatatctcgg ccagctccat gtcggcgtca tcatcagcag gtatgacctt gccggtgggc
     1201 cgattctgcc gttgcatgtt cgtcacctgc cgaacgtgct gaggcagctt gttaatcgtc
     1261 agacaaggcc gcgcattaat ggtttggcct tgcaccgaac cgcgtgttgc caggacatca
     1321 gcaggccatt gccaattatt gtcgggcgaa ccggccataa accgcaggtc gtccagctca
     1381 ctgtctcgac tttccgaaaa tgcgccaatc gccatgctca ggcgagagcg catctgggaa
     1441 agcatgtctt ttttgtccat taggtcttct tcgtcttagg tttttgagcc tgacgcttga
     1501 cgctgtacgc gatggcgacc gcctgttttg gcggtttgcc agcctttatc tcggccctta
     1561 cgtttttccg aaaggcgtcc ttgcttgctg acttgaccag aggcatcagg cttttccttt
     1621 tttggcagat ttactgggag tcttagcagt cttggctgat tctttgaagg ctttggctgt
     1681 aggagcgccg ggactgccgg gtttacgcat tttttctccg cttccagctt taatcctttc
     1741 acgctttcgg tggatattgg tatacaaacc gggttttgta ctcatttgca gttccacctt
     1801 ttcaaagagg cttttgcacg ttcggctggg cctttggcct tcgccaccac acctttcatt
     1861 cgggcgcaaa atgacgcttt gcgcccctca tcggctttcg tcttagggtt tggcgccgga
     1921 gcctttaatt ttgaccccgt ttcacgattg tatttcgcgc ggcccttggc cgtcaaaccc
     1981 gcacccttgc taaccgggag cttttcgccc cggcctactg acagcgaaac gccttttttg
     2041 cttgccatta ctcagtaaag ttgcgaatca ctgcaaagtt cagctcgaca gcctcggaca
     2101 aca
//
LOCUS       DATBNL010000257         1925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192002, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000257 DATBNL010000000
VERSION     DATBNL010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192002"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VIC30_04225"
     CDS             complement(<1..226)
                     /locus_tag="VIC30_04225"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEY7803624.1"
                     /translation="MYLSPHTESLSMASIKKMATVTSKGQVTLPLAIRQALHIEAGSK
                     LAFVLDGDRLSVAVDASTDEEDATDPAIGAF"
     gene            428..1231
                     /locus_tag="VIC30_04230"
     CDS             428..1231
                     /locus_tag="VIC30_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HEY7803625.1"
                     /translation="MHALTDLPALRAADIQYVLCDIDDTVTTDGRLTAQAYAAMQALH
                     DAGIAVVPITGRPAGWCDHMARMWPVAAVVGENGAFYMHYDHAARKMHQRFWTDETTR
                     QQNRQKLDTLASTILAQVPGCALASDQPYRIADLAIDFCEDVEPLSESAIEQIVSLFV
                     AAGATAKVSSIHVNGWFGEYDKLSMTRQLFLDLFDQTLEQAQDNTLFIGDSPNDAPMF
                     GFFDQSVGVANVQSQRHRLTHLPKYVCEGIGGAGFAEMANYILQGRVHS"
     gene            1340..1882
                     /locus_tag="VIC30_04235"
     CDS             1340..1882
                     /locus_tag="VIC30_04235"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803626.1"
                     /translation="MTAVEFKEVSKVWGKDTALQPTNLYLEAGEFSVLLGPSGCGKTT
                     TLRLIAGLETPSAGQIHIFGDEVTHRTPAARGVSMVFQNYALFPHLSVAENVAFGLKI
                     RRTSSTDIEQRLSRVLNLLGLAALRERKPAELSGGQQQRVALARALVSDSKLCLMDEP
                     LSNLDAKLRQSMREELPFSA"
BASE COUNT          450 a          519 c          496 g          460 t
ORIGIN      
        1 ggaaggcgcc aatcgcgggg tcagttgcgt cctcttcgtc ggtagatgca tcaaccgcca
       61 ctgacagcct gtcaccatcg agtacgaagg cgagcttact gccggcttct atatgcagtg
      121 cttgccttat cgcaagcggc agtgttactt gcccctttga ggtgactgtt gccatttttt
      181 taatcgaggc catggataag ctttctgtat gtggagataa gtacattgta agattttttc
      241 cttacttata gtttgattgg gatgttgatg aatatgtgaa ctaagcaaca tcttcacacg
      301 caccatagcg gctgacgtca ctgccaataa aattggccat aggtatgtaa gcgttaccat
      361 ctaacctgac cgaatcaaat gaccgctgac taaaaaacgc cagcgcctgt atcaagagcc
      421 acaacccatg catgcactaa ccgacttgcc tgccctgaga gccgctgaca ttcaatacgt
      481 gctttgcgat atcgatgaca ctgtcactac agacggtcga ttaaccgcgc aggcgtatgc
      541 ggccatgcag gcgctacacg atgccggtat cgcggttgta cccattactg gacgaccagc
      601 tggctggtgt gaccacatgg cacgcatgtg gccagtggca gcagttgttg gagaaaacgg
      661 cgcgttttac atgcattacg atcacgctgc ccgcaagatg caccaacgat tctggaccga
      721 tgaaaccacc cgccagcaaa accgacaaaa actcgacacg ctagccagta cgatcctggc
      781 gcaagtaccg ggttgtgcgc tagctagcga tcaaccgtac cgcatcgcgg atttagcgat
      841 tgacttctgt gaagatgttg agccactgtc ggaatcggct atcgaacaga tcgtgtcttt
      901 gttcgtagct gccggtgcca cagccaaagt cagctctatc cacgtcaacg gctggtttgg
      961 tgagtacgac aaactatcga tgacccgaca gttgttcctt gacctgtttg atcaaaccct
     1021 agagcaagca caagacaaca ccttattcat tggcgactcg cccaacgatg cgcccatgtt
     1081 tggatttttt gatcagtcgg tgggcgtggc caatgttcag tcgcagcgtc acagactgac
     1141 acacctgccc aagtatgtgt gcgagggtat tggcggggct gggtttgccg agatggcgaa
     1201 ctatattctg caaggacgtg tgcactccta gcagcaagac gcttcgtttc cctaaccccc
     1261 accccgttca agtaaaactt tttcacggat tcgtcattta aggtctctat aaaggcgtct
     1321 gtctattgat gtgactgaca tgaccgccgt cgaatttaaa gaagtcagca aagtctgggg
     1381 taaagacacc gcactgcagc ccaccaacct ttacctcgag gctggtgagt tctctgtgtt
     1441 gcttggccca tcgggctgtg gcaaaaccac cacgttgcga ttgatcgcgg gactcgagac
     1501 gccttcagcg ggacaaattc atatttttgg tgatgaggtc acgcaccgca caccggccgc
     1561 gcgcggcgta tcgatggtgt ttcagaacta cgcactgttt cctcacctgt cggtagccga
     1621 gaacgttgcg tttggtttaa aaatccgtcg aacttcaagc accgatatcg aacaacgcct
     1681 gtcacgggtt ctaaacctgc ttggtcttgc ggcactgcgc gagcgcaaac cggctgaact
     1741 gtctggcggc cagcaacaac gcgtggcttt ggctcgtgcg ttggtctctg acagcaaact
     1801 gtgcctgatg gacgaaccgt tatcgaacct tgacgccaaa ctacgtcagt ccatgcgcga
     1861 agagttaccg tttagcgcgt aaagccccgt tcttcaggac ggggctttac gcgcgggcgt
     1921 agcca
//
LOCUS       DATBNL010000258         2266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_172100, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000258 DATBNL010000000
VERSION     DATBNL010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172100"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..2150
                     /locus_tag="VIC30_04240"
     CDS             3..2150
                     /locus_tag="VIC30_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HEY7803627.1"
                     /translation="MQSHPVKVTFDAGAGFNLVVEPHAPGVFRIRLGARDAVAHDLPT
                     SGRAKVHAELLIARGEAISEAETDKSPDGDYWEVSQGDTVLRVGKGAFGLQVVKDNQV
                     LMVFSEDGIGHDDGHWSFCVSLSEKDTVYGLGQTMTDLNRRGEYVVSDDPEHRALPLA
                     WSPSGWGLYVNTLGRIDHDVAHSASDTYEVHAQAAVLDLFVFTGEPSEILNQYTAITG
                     RAGQVSLWAMGAWLKQSPGTTLTQVIEQVQELRENGVALDNVMLHAPMAWNWQESKLA
                     IDWDTLRFPDPKQVLDLFAAKSIQIALPSLPAIVVGTPTFEELEDRGWLLAKDNGDAS
                     VFKGNEATAGQDYGLLDLTHKDVYKQWVERQRQLADDGVAAVMCDVQLDIGDDVEARG
                     GESGAVLRTLYPMLARQALYDACAGHKVPPEGLVLTHDLVPAGQRYPWQAPVNTEFSW
                     EGLCQSVRAALSVGASGLPVQMHALGDDTKTDLDTDLDTELYLRWLAMCVFSGNFQFE
                     SAEHVAKHRVGEKHQALVAHWMQWRYRLIPYVLGAIEDAARTGLPVQRGMAMCFPLDR
                     EAHQWDTQFMCGPALLVAPVTQPGTTVQVYLPEAEGWWDLRTGWRYDGGQTLEMEVGL
                     DMIPVFGREGHMLCLGPATRSTAEFNSAKLLDDVWMFGMPIHNPVVMRNKIRVMQMQG
                     SSYIKGLEGLKIMPSEGLEVKRRGAEVRISRAR"
BASE COUNT          474 a          565 c          690 g          537 t
ORIGIN      
        1 tcatccagtc ccaccccgta aaagtcactt tcgatgccgg cgctggattc aacttggtcg
       61 tcgagccaca tgcgccaggc gtgtttagga tacggttggg tgcccgtgat gcggttgccc
      121 acgacctacc cacctcaggg cgtgccaagg ttcatgcaga gctgctcatc gccagaggcg
      181 aggccatcag tgaagccgag actgacaagt caccagacgg cgattactgg gaagtcagtc
      241 aaggtgacac tgtgcttcgg gtcggtaaag gcgcctttgg tttgcaagtg gtcaaagaca
      301 atcaagttct gatggtcttt agcgaagatg gcattgggca cgatgacgga cactggtcat
      361 tttgcgtatc gctgtctgag aaagatacgg tctatggctt gggtcagacc atgaccgact
      421 tgaatcggcg tggtgaatac gtggtgtcag acgatcccga gcatcgcgcg ttgcctttgg
      481 cgtggagccc atctggctgg ggcttgtacg tcaatacact gggacgtatc gatcacgatg
      541 tcgcgcatag cgcatcggac acatacgagg ttcatgcgca agctgccgtg ttggacctgt
      601 ttgtctttac cggcgagcca tcagagatac tgaatcaata caccgcaatc accggtagag
      661 caggccaagt ctcgttatgg gccatgggtg cttggcttaa gcagtctccg ggcacgacac
      721 tcactcaagt cattgagcag gtgcaggaat tacgtgagaa cggcgttgcg ctagacaatg
      781 tgatgttgca tgcccccatg gcatggaact ggcaggagtc gaagctggca attgactggg
      841 ataccttgcg gtttcctgac cccaaacaag tgcttgatct ctttgctgcc aaatccattc
      901 aaattgcact gccctcactg cccgccattg ttgtgggcac accaacgttt gaagagctcg
      961 aagaccgtgg ttggttgctc gccaaagaca acggtgatgc gagtgtgttt aagggcaatg
     1021 aggccaccgc tggtcaagat tacgggctgc tcgatctcac gcataaggat gtttataagc
     1081 agtgggttga gcgccagcga caattggctg atgacggtgt tgctgcggtc atgtgtgatg
     1141 tgcaacttga tattggtgat gacgtcgagg cgcgaggcgg agagtctggt gcagtgcttc
     1201 gtacgcttta tccgatgttg gcgcgtcagg ccctatatga tgcttgcgct ggtcacaaag
     1261 tgccgcctga aggcttggtg ttgacacacg atttggtgcc tgcgggccag cgctatccat
     1321 ggcaagcgcc ggttaatact gagttctctt gggaaggctt gtgccagagc gtccgtgccg
     1381 ctttgtcggt gggtgcaagc ggcttgcccg ttcaaatgca cgcactcggt gatgacacca
     1441 agaccgacct tgataccgac cttgataccg agttgtactt gcgctggttg gcgatgtgcg
     1501 tgttttctgg gaacttccag tttgagagcg ccgagcatgt ggccaagcac cgcgtgggtg
     1561 agaagcacca agcattggtg gcccattgga tgcagtggcg ttatcgctta atcccttatg
     1621 tcctaggtgc aatcgaagat gccgcgcgta ctggattgcc agtgcaacgt ggcatggcca
     1681 tgtgtttccc gctcgatcga gaggcgcacc agtgggatac gcaattcatg tgcggcccgg
     1741 ccctgttggt ggcgccggtc acacaacctg gcacgaccgt gcaggtttac ctgcctgaag
     1801 cggaaggctg gtgggatttg cgcaccggct ggcgctatga cggtggtcaa accctggaaa
     1861 tggaagtcgg gctagacatg attcccgtgt ttggtcgaga gggccacatg ctttgcttgg
     1921 gtccggccac gcgcagcaca gccgagttca attcagccaa gttgcttgat gatgtctgga
     1981 tgttcggcat gccgattcac aatcccgtgg tcatgcgcaa caaaatccgt gtcatgcaaa
     2041 tgcaggggtc aagctacatc aaaggcttgg agggactaaa aatcatgcca tcagagggtc
     2101 ttgaggtcaa gcgtcgcggc gctgaagtgc gtatctcaag agcacgctag tcgcatggat
     2161 aactaaaccg tgaacacagg gttgcttttt aagtcgactc tgtggctttg cgcgtttgtg
     2221 ttgctgacgg tgtctcggat cagtagcgct ggtctcatcg agtcac
//
LOCUS       DATBNL010000259         1765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_62723, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000259 DATBNL010000000
VERSION     DATBNL010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62723"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..>1765)
                     /locus_tag="VIC30_04245"
     CDS             complement(15..>1765)
                     /locus_tag="VIC30_04245"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEY7803628.1"
                     /translation="RGIPVGLHPQEKAPVAELVFTRLHAGGKFDKHAAAGAYAFSGGL
                     HGVGVSVTNALAKRRELTVWRDGGEHRMVFENGNVTEPLSQVGEVGKKRTGTRVTVWP
                     DAKYFDAATLPLGDLTHLLRSKAVLLAGVTVKLTVEKTGEQQTWCYDNGLQGYLSDAL
                     ADTALLVPMFAGEQFAKDGDEVFATGEGAQWVVTWAEDGALIRESYVNLIPTPAGGTH
                     EAGLREGLFGAVKGFAELHSLLPKGTKLLPEDVFSRVSFVLSAKVLDPQFQGQIKERL
                     NSRDAVRLVGGYVKTSLELWLNSNVEYGRKLAELAIRQAQARSRAAQKVEKKRSSGVA
                     VLPGKLTDCESSDASRTEVFLVEGDSAGGSAKMGRDKSFQAILPLRGKVLNAWEVDRD
                     RLFANNEIHDIAVAIGVDPHGPGDNPDLAQLRYGRICILSDADVDGSHIQVLLLTLFF
                     KHFPKLVEAGHLYVARPPLFRVDVPALGKRPLRKFYCLDEGELEALQDKLRKEGVKDN
                     TWSIGRFKGLGEMSPEQLWETTLNPDTRRLLRVQYGELGLEQTRQMFGMLMGKGESGQ
                     RRQWIEDKGNLAQVDI"
BASE COUNT          407 a          551 c          424 g          383 t
ORIGIN      
        1 caacaaacgg gtcatcaaat atcgacttgc gccaggttgc ccttgtcttc gatccactgg
       61 cgtcgctgcc cagactcgcc tttacccatc aacatgccaa acatctggcg cgtttgttca
      121 aggcctaact caccatactg cacgcgcagc aagcgccggg tgtctgggtt tagcgtggtt
      181 tcccacagct gctcggggct catttcacct aggcccttaa agcggccaat cgaccacgtg
      241 ttgtctttga cgccttcttt gcgcagctta tcttggagcg cttctaactc gccttcgtca
      301 agacaataga acttgcgcag tggccgcttg ccaagcgcag ggacatcgac ccgaaataaa
      361 ggtgggcgcg ccacatacag gtggccggct tcaacgagtt tgggaaagtg cttgaaaaac
      421 aatgtcaata aaagtacttg aatgtgtgaa ccatcaacgt cggcgtccga caaaatacag
      481 attcgaccgt aacgcagttg ggccagatcc gggttgtcac caggcccgtg tgggtcaacg
      541 ccaatggcca cagcgatgtc atgaatttca ttgttggcaa acaggcggtc gcggtccact
      601 tcccaagcgt taagcacctt gcctctgagc ggcaaaatcg cctgaaatga cttgtcgcgt
      661 cccatcttag ctgagccacc agccgagtcg ccctcaacca aaaagacttc tgtgcggctg
      721 gcatccgagg attcacagtc ggtcaacttt ccaggcaaga cggcaacacc cgaactacgt
      781 tttttctcga ccttctgagc ggctctggaa cgcgcttgtg cctgacggat cgccaactca
      841 gccagtttgc gcccatactc gacgttggag ttaagccaca attccagcga tgtcttcaca
      901 tacccaccga ccagtcgcac ggcatcgcga ctattcaatc gctccttgat ctggccttga
      961 aactgcggat caagcacttt ggctgacaac acaaagctga ccctcgagaa cacatcctct
     1021 ggcagtagct tagttccttt gggtaacaag ctgtgcaact cagcaaatcc cttgactgcg
     1081 ccaaacaacc cctctcgcaa ccctgcctca tgggtgccgc ccgctggcgt cggaatcaga
     1141 ttgacatacg actctctaat gagcgcgccg tcttcggccc aggtcacgac ccattgtgca
     1201 ccctcaccgg tggcgaacac ctcatcacca tctttggcga attgctcacc cgcaaacatg
     1261 ggcaccaaaa gtgctgtgtc agccaaagcg tcagacaaat aaccttgcaa gccattgtcg
     1321 tagcaccagg tttgttgttc accggttttt tcaacggtga gcttgaccgt cacgccagcc
     1381 aataagacag ctttgctgcg caacaagtgc gtcaaatcac caagcggcaa agttgcagca
     1441 tcaaagtatt ttgcgtcagg ccagaccgtc acgcgtgtcc cagtgcgttt tttgccgact
     1501 tcaccgacct gactcagcgg ttctgtgacg ttgccgttct caaacaccat gcgatgctca
     1561 ccgccgtcac gccaaaccgt taactcacgt cgcttggcca acgcgttggt gaccgacacc
     1621 cccacgccgt gcaagccacc agaaaaggcg taggcaccag ccgcagcgtg cttatcgaac
     1681 ttacccccgg cgtgcagcct tgtaaacaca agctcagcca cgggggcttt ctcttgcggg
     1741 tgcaaaccta ccgggatgcc acgac
//
LOCUS       DATBNL010000260         2868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_122734, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000260 DATBNL010000000
VERSION     DATBNL010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122734"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VIC30_04250"
     CDS             <1..266
                     /locus_tag="VIC30_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017875311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEY7803629.1"
                     /translation="QGQIGVITPISQHFCETCNRVRLDVSGTLYLCLGQDDTLELRPL
                     LRTGISDADLPRVIQKAVLKKPWRHEFSDKPEKIVRFMSQTGG"
     gene            279..839
                     /gene="mobB"
                     /locus_tag="VIC30_04255"
     CDS             279..839
                     /gene="mobB"
                     /locus_tag="VIC30_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020206258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEY7803630.1"
                     /translation="MTKTTPPMRSIKPNNRVLGISGRSGSGKTTLIEAMLPVFEQAGW
                     SVNIVKHSHHDIELDPPGKDSARFRGAGAREVIISSPYRFSISRELRGAPEPSLSELI
                     DRLSPADLTIVEGYHSENLPRLEVYRPSRVIEPQYPNLQSMIAVVSDERGAAGESGLP
                     VWPLNEPATVARQIMQWFETASEDQA"
     gene            851..2113
                     /gene="glp"
                     /locus_tag="VIC30_04260"
     CDS             851..2113
                     /gene="glp"
                     /locus_tag="VIC30_04260"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEY7803631.1"
                     /translation="MVFKSEASQPSRSAEIGSGVLAFDAALVKLLSQARRPVKVSHVS
                     LLQAQDRVLAAPVTSSMNVPAFDNSAMDGYALNVADVAKPSSSFVVAQRIAAGQSGQA
                     IEPGEAARIFTGAPVPEGTNVVVRQEQTEVHDNRIVVTGQFKAGQHIRRAGEDVAVDD
                     VVLHAGIRLEPQHLALAASIGVAQVPVYPRLRVGVLFTGDELVEPGQVLGAGKIYNCN
                     RYALHSLLARVGCGVVDFGVVKDSLTATTDALHNAAGECDVIMTCGGVSVGEEDWVKQ
                     AVTSLGSLDVWRIAMKPGKPLAFGRIGNADFVGLPGNPVSAFVTFLVAVMPFLRQRLG
                     LATLMPRYQLAVAGFDWAGDAKRREFLRVRQEPGESAQPLLALWPNQGSAVVSGLVWA
                     DGLVDLEPGTRVKAGDAVPYVPLADLMR"
     gene            2148..2405
                     /locus_tag="VIC30_04265"
     CDS             2148..2405
                     /locus_tag="VIC30_04265"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEY7803632.1"
                     /translation="MMKLQVRYFAQLREALQIDAEALTIEQPTAVTDLIEQLRGRGGA
                     WEDALSSEERICVAVNQEMVPMTHQLCGDAEVALFRPVTGG"
     gene            2411..>2868
                     /locus_tag="VIC30_04270"
     CDS             2411..>2868
                     /locus_tag="VIC30_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019043788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEY7803633.1"
                     /translation="MSESKDKVTDEQGFKNCSTSVQAEDFDVGAEIDALTAGRADMGA
                     VVSFVGYVREFNLQEGITALELEHYPGMTERSLEAIARRAMMRWPLTGVRIIHRHGRL
                     LPSDRIVTVLTASAHRHAAFEANTFIMDYLKSEAPFWKKEHRGQEAAWVQA"
BASE COUNT          606 a          695 c          921 g          646 t
ORIGIN      
        1 gccaggggca gattggggtg atcacaccga ttagccaaca cttttgtgaa acgtgcaacc
       61 gggtgaggtt ggatgtcagc ggtactctgt atttgtgcct aggccaagat gacactctgg
      121 aattgcggcc cttgttgcgc acaggcatct ctgacgctga tcttccgaga gtgatacaaa
      181 aggccgtgct taaaaaaccg tggcgccatg aatttagcga caagcccgag aagattgtgc
      241 gcttcatgtc gcaaacgggc ggctaggatt gatcagatat gactaagacc acgccaccca
      301 tgagatcgat caagccaaac aaccgcgtac taggtatttc cggacgctcg ggctcaggca
      361 agaccacgct catcgaagcg atgctgcccg tattcgaaca ggctggttgg tcagtgaaca
      421 tcgtcaagca cagccaccat gacattgagc tcgatccgcc aggcaaagac agcgcgcggt
      481 ttcggggggc aggtgcacgc gaggtcatta tcagttcacc ctatcgcttt agcatttcgc
      541 gtgagttgcg cggtgcgcct gagccttctt tgtctgaatt gatagatcgt ctgagtccag
      601 ccgatttgac gattgtcgag ggctatcaca gtgagaacct gccgcgactc gaggtctatc
      661 gcccctcgcg cgtaattgag cctcagtacc cgaatctgca atcgatgatt gctgtggtga
      721 gcgatgagcg tggtgcagct ggtgaatcgg gcttgccggt ttggccttta aatgaaccag
      781 cgactgttgc acgacagatt atgcagtggt ttgagacggc cagcgaggat caagcatgat
      841 aggagatttc atggtgttta aatctgaagc aagccaacca agccggagcg ctgaaattgg
      901 gtctggcgtg cttgcatttg atgctgcctt ggtcaagctt ttgtcgcagg cgcgacggcc
      961 agtcaaggtc agtcacgtct cattgttgca agcccaagac cgggtgctag ccgcgcctgt
     1021 aacctcgtcg atgaatgtgc ctgcattcga caacagtgcc atggatgggt acgccttgaa
     1081 cgtggcagat gttgctaagc catcgagttc gtttgtggtg gcgcagcgaa ttgcggcggg
     1141 tcaatcgggc caggccattg aacctggcga agcagcacgg atctttaccg gggcgccggt
     1201 gccagaaggc accaatgtgg ttgtgcggca agagcagacc gaggtacatg ataaccgcat
     1261 cgtggtaaca ggtcagttta aggcggggca acacattcgt cgcgccggtg aagacgtggc
     1321 agttgacgat gtcgtgctgc atgctggcat tcggcttgag ccgcagcact tggcacttgc
     1381 cgcctcgatt ggtgtggcgc aagtgccggt ctacccgcgc ttgcgagtcg gcgttctgtt
     1441 cacaggcgac gagctggtag aacccggtca ggtgctaggc gctggcaaga tttacaactg
     1501 caaccgctac gctttgcatt cgttgctcgc gcgcgttggg tgtggcgtcg tggatttcgg
     1561 ggtggtgaaa gacagcctga cggcaacgac cgatgccctg cacaatgcag ccggagagtg
     1621 cgacgtcatc atgacctgtg gtggcgtctc ggtgggcgaa gaagactggg tcaagcaagc
     1681 ggttacgagt ttgggatcgc tcgatgtctg gcgcatcgcc atgaagcccg gcaagccact
     1741 ggcgtttggt cgcattggca atgcagattt cgttggcttg ccgggcaatc ctgtgagtgc
     1801 ctttgtgacg tttttagtgg ctgtcatgcc ttttttacgg cagcgtttgg ggttggcaac
     1861 actcatgccc cgttatcagt tggctgtggc cgggtttgac tgggctggcg atgccaagcg
     1921 acgcgaattc ttgcgcgtgc gccaagagcc aggtgagtca gcccagcctt tgttggcact
     1981 ttggcccaac caaggctcgg ctgtggtcag tggcctggtg tgggctgacg ggctggtgga
     2041 tttggagcct ggcacgcgtg tgaaggccgg tgatgcggtg ccttacgtgc cgctggcaga
     2101 tctgatgcgt tagtggacgg acagcaaaga acaggaaata ggaccagatg atgaaactac
     2161 aggtgagata ttttgcgcaa ctgcgtgaag cgcttcagat tgatgcagaa gcgctgacca
     2221 ttgagcagcc gacggctgta acagatttga ttgagcagtt acgggggcgt ggtggcgctt
     2281 gggaagacgc actttcttca gaggaaagga tttgtgtggc ggttaaccaa gaaatggtgc
     2341 cgatgacgca tcagttgtgc ggtgatgctg aggtggcgtt gtttcggccg gtcacgggag
     2401 ggtagcaatc atgagcgaga gcaaagataa agtcacagac gagcagggct ttaagaactg
     2461 cagcactagc gtgcaggccg aggattttga tgtaggcgct gaaatcgatg cgctgactgc
     2521 cgggcgcgcc gacatgggtg cggtggtgag ttttgtgggg tatgtcaggg agttcaactt
     2581 gcaagagggc attaccgcac ttgagcttga acattacccc ggcatgaccg aacgcagtct
     2641 agaggcgatt gcgcggcgtg ccatgatgcg ctggccattg actggcgtgc gcattattca
     2701 tcgccatggg cggcttctac cgagcgatcg gattgtgacg gtcttgaccg caagtgctca
     2761 tcgccatgcg gcctttgaag ccaatacctt catcatggat tatctaaaaa gcgaagcccc
     2821 gttctggaaa aaagagcatc gcgggcaaga ggcagcctgg gttcaggc
//
LOCUS       DATBNL010000261         1797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_92803, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000261 DATBNL010000000
VERSION     DATBNL010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92803"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VIC30_04275"
     CDS             complement(<1..682)
                     /locus_tag="VIC30_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017234233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7803634.1"
                     /translation="MTLSLVLGQALNGLQFGLLLFLMAAGLTLVFGIMSFVNLAHGSL
                     YMFGAYFAATIATYSGSFVFAVVLSALLMFVLGLLLDAGGLQALHRRSHLDQVLATFG
                     VVLFANELVRVVWGNSPLYMDAPDALAGAIDLFGMSYPSYRFAIIVVGALVALGLYLL
                     IERTRIGMLIRAGATNRRMVSALGVNIGWLNRFVFALGAAPAGLAGAMVGPILSIEPG
                     MGEPVLILT"
     gene            complement(729..>1797)
                     /locus_tag="VIC30_04280"
     CDS             complement(729..>1797)
                     /locus_tag="VIC30_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017234231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803635.1"
                     /translation="LSGPAAALGQDMYDGFMLGLEQSGGKLGEVEVEVIREDDQLKPD
                     LAVQTVNRFIERDDVDVVAGITFSNVMMAVAKPLADSDTVFVGMNAGPAPLAGERCEP
                     NFFFVGYQNDQQAEGVGKYASDKGFDNVYLMAPNYQAGKDAVGGFKRYYDGGIAGEVY
                     TRVNQPDYSAEIAQLQAANPDAVYVFYPGGMGINFIKQFRQAGLLGKIPLLSVSSFDG
                     TTLPALKETAVGAISGSFWGVDFDNPANQKFVKAFEEKYGRIPSQYAAQAYDGALLLD
                     AALASIDGNYEDKDALKKALRQVQFESVRGEFEFNKNGFPIHDMYVFEVAPDAQGRVS
                     HKTLQKTLPAQPDSYVSQCPL"
BASE COUNT          488 a          533 c          432 g          344 t
ORIGIN      
        1 gcgtcaatat caaaacaggc tcacccatgc cgggctcaat agacaggata gggccgacca
       61 tggcgccagc caagcccgca ggtgccgcac caagcgcaaa cacaaaacgg ttaagccaac
      121 cgatgttgac acccagcgct gacaccatgc gacggttggt cgcaccggca cggatcaaca
      181 tgccaatgcg ggtgcgctcg atcagcaaat agagtcctaa cgccaccagc gcgcccacca
      241 caatgatggc aaaccggtac gagggataac tcatgccaaa taaatcgatg gcaccagcca
      301 atgcatcagg tgcatccatg tacagcggtg agttgcccca taccacccgc accagctcat
      361 tggcaaaaag caccacacca aaggttgcca gcacttggtc aagatgactt cgtcggtgca
      421 gtgcctgcaa gccgcccgca tcgagcaaca ggccaagcac gaacatcagt agcgctgaca
      481 acaccaccgc aaacacaaac gagccgctat aggtcgcaat ggtggccgca aagtaggcgc
      541 cgaacatata gagcgatcca tgagctaagt tcacaaagct catgatgcca aagaccagcg
      601 tcaaacctgc cgccatcaaa aacagcagca agccaaactg caggccattg agggcctgcc
      661 cgagaaccag acttagggtc acagcaacac aacgccgcgg gtacgcgacg cttcaatggc
      721 gaccggcttt acagcggaca ctgactgaca tatgaatctg gttgagcagg taatgtcttt
      781 tgtaaggttt tgtgtgacac acgaccttgg gcatcaggtg ccacttcaaa aacatacatg
      841 tcgtgaatcg ggaaaccatt cttgttgaac tcgaactcac cacgcactga ctcaaattgc
      901 acttggcgca aggctttctt taacgcgtcc ttgtcttcgt agttgccgtc gatacttgcc
      961 aatgcagcat cgagtagtag cgcaccgtcg tatgcctggg cggcatactg cgaaggaatg
     1021 cgcccgtatt tctcttcaaa ggccttcaca aacttctgat tggcgggatt atcaaaatca
     1081 accccccaaa acgaaccgga gatcgcaccc acggcggttt ctttcagagc cggcagcgtc
     1141 gtgccatcaa agcttgaaac tgacaatagc ggaatcttgc ccaagagccc tgcttggcgg
     1201 aactgcttaa taaagttaat acccataccg ccgggataga agacatagac cgcatcggga
     1261 ttggccgcct gcagttgggc aatctcggct gagtagtcag gttgattcac acgtgtgtat
     1321 acctcgccgg caatcccacc atcgtaatag cgcttaaagc caccaacggc atccttgccc
     1381 gcctggtagt tcggtgccat caagtaaaca ttgtcaaaac ctttgtcact ggcatatttg
     1441 ccaacgcctt cggcttgttg atcattctgg tagcccacaa agaagaagtt cggctcacag
     1501 cgctcacctg ccaacggggc gggtccggca ttcatgccga caaagacggt gtctgaatca
     1561 gccagcggtt tggcaacagc catcatcaca ttagagaacg tgatgccagc caccacatca
     1621 acgtcatcgc gctcgataaa acgattcact gtctgcacag ccagatcggg tttgagctgg
     1681 tcgtcctcgc gaatcacttc aacctcaact tcaccaagct tgccacccga ttgctcaaga
     1741 ccgagcataa agccgtcata catgtcctga cctaaagcag ctgccggacc ggataaa
//
LOCUS       DATBNL010000262         1516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_52955, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000262 DATBNL010000000
VERSION     DATBNL010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52955"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            5..1141
                     /locus_tag="VIC30_04285"
     CDS             5..1141
                     /locus_tag="VIC30_04285"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006464972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803636.1"
                     /translation="MNTLTASAYTTATPHHVNSLISDVRHIVTEDLLPITARIDEGFY
                     PADVMRTLAGAGAMSAHLRPPHGEADFQTSLQAMAEISRVCGSTGFMTWCQGVCGLYL
                     QNAASPYLSQTLLEDHISGFTLGGTALSNPMKTFAGIETFQLHATPTTNGYRINGSLP
                     WVSNLGPDHYCAAIAELDTDPTRQVMFLLRCDAPSVELAACPRFSGMEGTGTYALHLK
                     DHHIGADEIIADPVAPWIKRIRPAFVLLQTGWAAGIIQASIASIRAAEKPLAHVNGHL
                     PTQADELEGERLAWWQTVMDLARDPFDQSDAFFLKVLKARAKASELALDAAQAALLHQ
                     GAAGYVMSSPVQRRIRESHFVAIVTPALKHLRKEIARLEEQANR"
     gene            complement(1160..>1516)
                     /locus_tag="VIC30_04290"
     CDS             complement(1160..>1516)
                     /locus_tag="VIC30_04290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803637.1"
                     /translation="PLNSNAQDFAKTGTPWLYRTLPSELAVLIDKYLIIGLAIFLLAE
                     VYRVMRYLYEFLALSAETLSLNILRRQRNLRAKGKQPGMVGRLLERWAQGVVTRQSIR
                     QKAADVLGKPPRNHTQ"
BASE COUNT          356 a          436 c          381 g          343 t
ORIGIN      
        1 taccatgaac acgctaactg cttcggcata cacgactgcg acaccccatc acgtcaatag
       61 tttgatcagt gatgtcagac acatcgttac cgaagactta ctgcccatta cagctcgtat
      121 tgatgaaggg ttttatccgg ccgatgtgat gcgtacactc gcaggcgcag gtgccatgag
      181 tgcgcatctg agaccacccc acggtgaggc tgattttcag actagcttac aagcgatggc
      241 agagatttct cgtgtttgtg gatccaccgg ctttatgacc tggtgccaag gcgtgtgcgg
      301 actttaccta caaaacgccg cttctcccta cttgtcgcaa accctcctcg aagaccacat
      361 cagtggattt acgcttggcg gcactgccct gtctaacccc atgaaaacct tcgctggcat
      421 cgagacattt cagctacatg ccacgccaac gacaaacggt taccgcatca acggcagtct
      481 gccttgggtc agcaaccttg ggcccgatca ctactgcgca gccattgccg agctcgacac
      541 agaccccaca cgtcaggtga tgttcttgtt gcgctgtgat gcacctagcg tcgaactcgc
      601 cgcctgccca aggttttctg ggatggaagg tactggcacc tacgcactgc acctgaagga
      661 tcaccacatc ggtgcagacg agatcattgc cgacccagtt gccccctgga tcaagcgcat
      721 ccgccctgca ttcgtgctgt tacaaacagg ctgggctgcc ggcatcatcc aagccagtat
      781 cgccagtatt cgtgctgcag aaaaaccact ggctcacgtc aacggccact tgccaacgca
      841 ggccgatgag ctggagggcg agcgcttagc gtggtggcaa accgtcatgg atttggctcg
      901 cgatccattt gaccaaagtg atgccttttt tctgaaggta ctcaaagctc gggccaaggc
      961 cagtgaactc gcgcttgatg cggcacaagc cgctttgctg caccaaggcg cagccggcta
     1021 tgtcatgagt tcaccagtgc aacgacgcat tcgagagtct cactttgtgg cgattgtgac
     1081 cccagcgctt aagcacttac gcaaggagat cgctcggctt gaagaacagg cgaataggta
     1141 gtcaaaacaa atatcgtgac tattgcgtgt gatttcttgg tggtttgccc aacacatctg
     1201 ccgctttctg gcggatagac tgacgcgtca ctacaccctg cgcccaacgc tcaagcaagc
     1261 gcccaaccat acccggttgt ttgcctttgg cccttaggtt gcgctgtcgt cgcaagatgt
     1321 tcagtgacag cgtctcagcc gaaagtgcta aaaactcgta caggtaacgc attacacgat
     1381 agacttcagc gagcaaaaat atggctaggc cgataatcaa gtacttatca atcaacaccg
     1441 cgagttcact cggtaacgtg cgatacaacc aaggtgttcc agtcttggcg aaatcttgtg
     1501 cattggagtt cagtgg
//
LOCUS       DATBNL010000263         3064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_152555, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000263 DATBNL010000000
VERSION     DATBNL010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152555"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VIC30_04295"
     CDS             complement(<1..795)
                     /locus_tag="VIC30_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEY7803638.1"
                     /translation="MLDPVSLRKDLDAVVERLATRGVAFDSDAFNALESKRKTVQTET
                     ETLQAQRNALAKQIGALKSKGEDASEVMAQSQAIPEQLKALEESLQQIQTDLNALLMA
                     TPNLPHESVPVGADSDDNVEVRRWVPAPDANGDPQALAFTAKDHVEIGEPLGLDFEVG
                     AKLSGSRFTFMRGPMARLHRALAQFMLDMQTTEHGYTECYTPYIVNASTLLGTGQLPK
                     FREDMFWVTRGGDTDEPGEEQFLISTSEITLTSMVRDTIVPEAQLPI"
     gene            complement(869..1045)
                     /locus_tag="VIC30_04300"
     CDS             complement(869..1045)
                     /locus_tag="VIC30_04300"
                     /inference="COORDINATES: protein motif:HMM:NF022085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2474 domain-containing protein"
                     /protein_id="HEY7803639.1"
                     /translation="MATTPEPQETDKSSEPTHSEATVQAPSKWRRLGWFVGLWAVSVF
                     TLWVFSWVIRWAAT"
     gene            complement(1029..2036)
                     /gene="cydB"
                     /locus_tag="VIC30_04305"
     CDS             complement(1029..2036)
                     /gene="cydB"
                     /locus_tag="VIC30_04305"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008903050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEY7803640.1"
                     /translation="MMIDFPLIWAAIIAFAILAYVVLDGFDLGVGILFPYVKGEANRD
                     QMMNSIAPVWDGNETWLVLGGGGLFAVFPLAYAVIMPALYIPIFTMLLALVFRGVAFE
                     FRWKERGKSNFWDVAFAGGSTVAAFAQGMILGAIIDGIAVDGRSYAGGAMDWFSPFAV
                     LTGISVVVGYALLGATWLVIKADGEVYQKASGFAKRLAGLVLVLIVAVSIWTPMLHDY
                     FADRWFSWPDLIYTVPVPLLVLGCAWMLLDGLKRDHSAKPYLATVGIFVLGYIGFIIS
                     IFPYIVPGQITLWEAAAPDESLKFLLVGSVVLIPTILAYTAYSYWVFRGKVGDSHGYH
                     T"
     gene            complement(2030..>3064)
                     /locus_tag="VIC30_04310"
     CDS             complement(2030..>3064)
                     /locus_tag="VIC30_04310"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEY7803641.1"
                     /translation="AFGTFFSAFWILSINSWMQTPAGYEINEVGQFIPVDWLAVIFNP
                     SFPHRFAHMVLAAYLTTAFVVGGVAAYHLLKYHAGKAASSINIEAVKKMFSMAMWMAA
                     IVTPIQMYAGDSQGLNTLAHQPMKIAVIEGHFEPQNPAGLVVFGIPNEEEGRMEYKVE
                     IPDLGSLILRHNLSEGLQGLNQFPRADWPPMAPPFYAFRIMVGMGVLMLIMGIWSLIL
                     RRKGRLYDTPLMLRAAVAMGPAGFVAVICGWVVTEVGRQPFTVYGLLRTEDSLSPITT
                     PMVATSIIAFVLVYFTLFGAGLVYILRQMRQPPLTAESMLDAKKPNLAAGFVPPSFAR
                     KPQAPRKEQS"
BASE COUNT          808 a          891 c          765 g          600 t
ORIGIN      
        1 tatgggtaac tgagcctcag gcacgatcgt atctcgtacc atactagtga gcgtgatttc
       61 cgaggtggaa atcaggaact gttcttcgcc tggttcatcg gtatcaccac cgcgcgtcac
      121 ccagaacata tcctcgcgaa acttcggcaa ctggccagtg cccaacaacg tcgaggcgtt
      181 aacgatgtat ggggtgtagc attccgtgta gccgtgttcg gtggtttgca tatcgagcat
      241 gaactgcgca agtgcccgat gcaggcgtgc catcgggcca cgcatgaacg taaaacgtga
      301 acctgaaagc ttggcgccca cttcgaaatc aagccccaat ggctcaccga tttcaacgtg
      361 gtcctttgcc gtaaacgcaa gagcttgtgg gtcaccgttt gcatcgggcg ctggtaccca
      421 gcgtctgact tccacattgt catcgctgtc tgcacccacg ggtaccgact catgaggcag
      481 gttcggcgtg gccatcaaaa gggcattcag atcagtctgg atttgttgca acgactcttc
      541 gagtgctttt aactgttctg gtatagcctg tgattgcgcc atgacttcgc tggcatcttc
      601 acccttggat ttaagtgcgc caatttgctt ggccaaggca ttgcgttgcg cctgcaaggt
      661 ctcggtttcg gtttgcacgg ttttgcgctt ggactcgagt gcgttaaacg catcactatc
      721 aaacgccacg ccacgcgtgg cgagtctctc aacaacggca tcaaggtctt ttctgaggct
      781 aacgggatca agcatggcgg caactttaag cgaagattca aagccaatat tgtagccgcc
      841 agacaccgcc tgacggttgg gcttgtcgtt aggttgccgc ccagcgaatc acccaactaa
      901 aaacccacag cgtaaacacg ctgaccgccc acaaaccgac aaaccagccc agacgccgcc
      961 attttgacgg ggcctgaacg gtcgcctcag agtgtgtcgg ttcgctggac ttgtccgttt
     1021 cttgcggctc aggtgtggta gccatggctg tcgcctacct tgccacgaaa cacccaatag
     1081 gaataagccg tgtatgccaa gatcgttgga attaacacca cactaccgac gagcaagaac
     1141 tttaatgact catccggtgc agccgcctcc cagagcgtga tctgacctgg cacgatatac
     1201 gggaagatgc tgatgatgaa cccgatgtag cccaacacaa aaatacccac cgtggccaaa
     1261 tacggcttgg cactgtggtc gcgcttgagc ccgtcaagca gcatccaggc acaaccaagc
     1321 accagtaacg gtacaggaac ggtgtagatc aaatctggcc acgagaacca ccgatcagcg
     1381 aagtagtcat gcaacatggg tgtccaaatg ctgacggcaa cgattagcac aagcaccaga
     1441 ccagccaaac gcttggcaaa cccgctggct ttttgataaa cctcgccatc ggccttaatg
     1501 accagccagg tcgcacccaa caaagcataa ccaacgacca ctgaaatacc ggtcagcaca
     1561 gcaaacggtg aaaaccagtc catggcgccg ccagcataag aacgaccgtc cacagcaatg
     1621 ccgtcgatga tcgcaccaag gatcatgccc tgcgcgaaag ccgcgaccgt tgaaccacca
     1681 gcaaaagcaa cgtcccagaa gttagatttg ccacgctctt tccagcgaaa ttcaaacgcc
     1741 acaccacgaa acaccagtgc cagcagcatc gtaaagatcg gaatgtagag cgctggcatg
     1801 atgaccgcgt aggccaacgg aaaaaccgca aacaggccgc cgccgcccag caccaaccaa
     1861 gtctcgttgc cgtcccaaac cggcgcaatc gagttcatca tctgatcacg attggcttcg
     1921 cctttgacgt aaggaaacag aatgccaacg ccaagatcga atccatcgag caccacgtaa
     1981 gccaggatgg caaacgcaat gatggcggcc caaataagtg ggaaatcaat catgattgct
     2041 ccttgcgcgg tgcctgtggc ttgcgcgcaa acgacggtgg cacaaaacca gcagcgaggt
     2101 tgggcttttt ggcatcaagc atggactcag ctgtcaacgg cggttgacgc atctggcgaa
     2161 ggatatagac caaacctgca ccaaacaacg tgaaataaac caacacaaaa gcaataatgc
     2221 tcgtggccac catcggcgtg gtgatcggag acaaggagtc ttcggtacgc agcagtccgt
     2281 acacggtaaa cggctggcga cccacttcag tgaccaccca tccacagatc accgccacaa
     2341 aaccggcagg tcccatggcc acggcagctc ttagcataag cggcgtgtca tacaaacgac
     2401 ccttacgacg cagaatcagg ctccagatac ccatgatcag catcaacaca cccataccca
     2461 ccatgattcg gaaggcataa aaaggcggtg ccatcggggg ccagtcggcg cgcgggaact
     2521 gattcaaccc ctgcagtcct tcagacaagt tgtgacgcaa gatcaaacta ccgagatcag
     2581 ggatctcaac cttgtactcc atccggcctt cttcctcgtt cggaataccg aacacaacca
     2641 agccagcggg gttttgcggt tcaaagtgtc cctcgataac cgcgatcttc atgggctgat
     2701 gtgccagcgt gttcaaaccc tgcgaatcac cggcgtacat ctggatcggg gtgacaatgg
     2761 cagccatcca catggccatg gagaacatct ttttaacggc ttcgatgttg atcgaactcg
     2821 ctgctttacc cgcatgatat ttcagcaagt ggtaggctgc cacaccgcca accacaaagg
     2881 cggtggtgag atacgccgct aacaccatgt gtgcaaaccg gtgcgggaac gacggattaa
     2941 agatcacggc cagccaatca accggaatga attgacccac ttcgtttatt tcatagccag
     3001 ccggtgtttg catccaacta ttaatcgaca gaatccaaaa ggccgagaag aacgtaccaa
     3061 atgc
//
LOCUS       DATBNL010000264         2163 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_182373, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000264 DATBNL010000000
VERSION     DATBNL010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182373"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..828
                     /locus_tag="VIC30_04315"
     CDS             103..828
                     /locus_tag="VIC30_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008161489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803642.1"
                     /translation="MSKPLALVTGGSRGIGRAIVQRLLADGFEVLNFSRTPAEESAAG
                     ETFESVDLMDPKATSQAIAHWSGKREIVHLVNNAGMIEVAALADVTQAQVDKMVNLNL
                     MAPMLLTQALIPAMRSLGQGRVVNIGSRAALGKVGRTVYSATKAGLVGMTRTWALELA
                     AHGVTVNAIAPGAIATELFLAANPPDSEQTKRLKAAVPLGRVGEPDEIAHMVSMFMHP
                     LGGYTTGQVLYVCGGLSVGLAGN"
     gene            1451..>2163
                     /locus_tag="VIC30_04320"
     CDS             1451..>2163
                     /locus_tag="VIC30_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009552280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DctP family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY7803643.1"
                     /translation="MAQAPVKLKWAHAYETSEPYHTESVWAAEEIKKRTNGKFDIQVF
                     PASSLGKESDINQGLTLGTVDMIISGPSFAARNYPRIGIAYYPFIFRDADHQAAYAKS
                     DVFKELADEYQKRTGIKMTAYTYYGARHTTSNRPFEDCAGMKNLKIRVPDAPAYMATP
                     TACGANPTPIAFAEVYLALQNGTVEAQENPLTTIQAKKFYEVQDNIMLTGHIVDGLVT
                     QIGPHVWNQLTDKEKQIFV"
BASE COUNT          524 a          547 c          566 g          526 t
ORIGIN      
        1 ccgctgcata gacacaaccc gcagtctgca ttttttagtt ctctgtgggc tgcccaatgg
       61 tgcgccaacc cgttaagatc agcgcatcaa aggaggggaa tcatgtctaa accacttgca
      121 ttggtcacgg gcggcagccg cggtattggg cgcgccatcg ttcaaaggct cctagccgac
      181 ggttttgagg tgttgaactt tagtcgcacg ccggctgaag aatcggctgc tggtgaaaca
      241 tttgagtcag ttgacttaat ggacccgaaa gccactagcc aagccattgc ccactggtct
      301 ggtaagcgtg agatagtgca tttggtcaat aacgctggga tgattgaggt tgcagcactg
      361 gctgatgtca cgcaggcgca agtcgacaaa atggttaatc tcaatctcat ggcaccaatg
      421 ttgctcaccc aagccttgat tcctgccatg agatcgcttg ggcaggggcg tgtggttaac
      481 atcggcagcc gtgccgcact tggtaaggta ggccgcaccg tctatagcgc cactaaggcg
      541 ggtctggtgg gcatgacgcg cacttgggcc ttagagcttg ccgcccatgg tgtgacagtc
      601 aatgcgatcg cgcctggtgc cattgccacg gagttgttcc tggcagccaa tccgcctgat
      661 tccgagcaaa ccaagcgtct aaaagcggcg gtgccactcg gtcgagtcgg tgagccagat
      721 gaaattgcac acatggtaag catgttcatg catccgcttg gcggatacac caccggccaa
      781 gttttgtacg tgtgcggggg cttgtcagtg ggtcttgcgg gcaattaaag atcctgaaac
      841 aaaaaggctt aagagttggt gaaaaatcct gttcgtcatt ggcgaacggg ttttgagtgg
      901 actcattgtg accctatgaa cctgacgtag ctgtggatgt gccgtccgag tgacagcgat
      961 tgattaacgg tcctgtttcc tgccaattcc cgcatgaatg ttgcaggccg cagaaatggt
     1021 cgttgtaatg gtcaaacata tcggcagagc ccataatgag tatgcattag cggtcttgct
     1081 gtctgaggct gagctttacg gtcggtcaca cgatgtgtag tcaagtttgt ttgcggctca
     1141 gctttcttat ttgtcaactt tttggtcaac cgaaagtcta aactggtcag accaattgtg
     1201 cgtaatttcc ctaaaaagca gggtttatcc tgattcggtt ctgtttgctg atccctatga
     1261 tcagtacacg aacataacaa cataacctca gacagttgtc agatatcgac tttcagtgag
     1321 ttgtttattt gagtctgaag cgagttaata gcgaatccaa aggaggatac ccatggtctc
     1381 acgccgtaaa tttaatctgc ttgttgctgt agccgctgtc tgtgccactg gcgcgttttc
     1441 tttgccagcc atggcacaag cgccggtcaa gttaaagtgg gcgcatgctt acgaaacatc
     1501 tgagccttac cacaccgagt cagtctgggc tgccgaggaa atcaaaaaac gtaccaacgg
     1561 taaattcgat attcaggtgt ttccagcctc atcgcttggc aaggaaagcg acatcaacca
     1621 agggttgacc ttgggcacag tggatatgat tatctctggc ccgtcctttg ccgcacgcaa
     1681 ctatccgcgc atcggcattg cttattatcc ctttatcttc cgtgacgctg accaccaagc
     1741 cgcctacgcc aagagcgatg tttttaagga attggctgac gagtaccaaa agcgcacggg
     1801 catcaaaatg acggcctaca catactacgg ggcacgccac accacatcaa accggccgtt
     1861 tgaagattgc gccggcatga aaaacctcaa aatccgagtg cctgatgcac cagcttatat
     1921 ggcaacgccc acagcctgtg gtgcaaaccc gaccccaatc gcctttgctg aggtttacct
     1981 tgcattgcaa aatggcaccg ttgaagccca agagaaccca ctgacgacga ttcaggccaa
     2041 gaagttctac gaggtgcagg acaacatcat gctgactggt cacattgttg acggcctcgt
     2101 gactcagatc ggtccacacg tctggaatca actgaccgat aaagaaaagc agatctttgt
     2161 tga
//
LOCUS       DATBNL010000265         3316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192080, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000265 DATBNL010000000
VERSION     DATBNL010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192080"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VIC30_04325"
     CDS             <1..262
                     /locus_tag="VIC30_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803644.1"
                     /translation="IPENLGRIVRVVASNGVENWSNHGPLHTWEVETMSQAETLTYVI
                     KGKLCFKSRGPVPDAFLRPLRPPVDEPALEEAQPLPSEPVSA"
     gene            368..1846
                     /locus_tag="VIC30_04330"
     CDS             368..1846
                     /locus_tag="VIC30_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007749167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEY7803645.1"
                     /translation="MKKYQTYIDGQWADPASGQWLDTENPFTGKPWAQIPRCNAEDAE
                     RAVAAAWQAFDKGPWSSLTASARGAMLRKLGDLIAQNAEHLADIEVQDNGKLKAEMFG
                     QMQYMPQWFYYFGGLADKIEGAVIPVDKPGMFNFTRHEPYGVVTIITPWNSPLLLVAW
                     KLAPALAAGNAVVIKPSEFTSASMLEFMTLVEQAGFPKGVVNVVTGLGNEVGSALVEH
                     PKVARVAFTGGEMGGIKVAEAAARGLKPVSLELGGKSPNIIFEDADIDNAVKGAVSGI
                     FAATGQTCLAGSRLLVHESVHDEVVEKLLALAKTAQMGDPMQSSTQVGPVTTRPQYEK
                     ILSYIDVAKGEGAQCVLGGGPAARAECGEGWFVEPTIFTGVNNQMRIAQEEVFGPVLS
                     IIKFKDDDEAVELANDVLYGLAAGVWTQSINRALDVSARIRAGTVWVNAYRVVSYMSP
                     FGGYKRSGLGRENGQAMIYEYLQTKSVWINTNKDIANPFVMG"
     gene            1940..>3316
                     /locus_tag="VIC30_04335"
     CDS             1940..>3316
                     /locus_tag="VIC30_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011515268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY7803646.1"
                     /translation="MIKDLLPYLLAYKWRVAFALACMILAKFANLGVPIVLKDMVNAL
                     DVNTMAGALLVVPVGLIIGYGLLRLSTSIFTELREALFARVTQNAVRQIALSVFNHLH
                     RLSLNFHLSRQTGGVSRDIERGTRAIQTLVSFSLYSIFPTFFEFALVLGYLAIFYDIW
                     FSLITLVALVLYIIFTIVVTEWRSQLRRTMNQLDTRANQKAVDALLNFETVKYFGNEA
                     YESDRYNQSMQLYQKAAITSQKSLAALNLGQQIIISVGLVLIVWRAAVGVADGSLTLG
                     DLVLVNTLMIQLYMPLNFLGVVYRELKQSTADIDRMFNLLNEQQDITDSPGAPALVVA
                     DPSRGPRVVFDRVSFSYDKQRPVLKNISFTVEAGTTTAVVGRSGAGKSTLSRLLFRFY
                     DVDEGRIMLDGQDLREVTQASLRAAIGIVPQDTVLFNDTIGYNIRYGRPDATDAEVHA
                     AARAAQLES"
BASE COUNT          734 a          946 c          916 g          720 t
ORIGIN      
        1 tatcccagaa aaccttgggc gcatcgtgcg cgtcgtggct tccaatggcg tagaaaactg
       61 gtctaaccac ggccccttgc atacctggga agtcgagacc atgtcacaag ccgagacact
      121 gacctacgtc atcaaaggca aactgtgctt taagagccga ggcccggtgc ctgacgcatt
      181 tttacgtccc ctgcgcccac cggtcgatga gcccgcgctc gaagaagccc aaccactgcc
      241 ttctgagcca gtgagcgcct gacgaacatc cccacatact aatgcccgtg acagcgctgt
      301 gtgaatcaca catcaccggg tgctagcagt atcatggcgg caaacttagt tcactggggg
      361 agcaatcatg aaaaaatatc aaacctatat cgacggccag tgggccgatc ctgcaagcgg
      421 ccaatggcta gacaccgaga acccgtttac cggcaagccg tgggcacaga ttccgcgttg
      481 caacgccgaa gatgccgagc gcgcggtggc cgccgcctgg caagcctttg acaaagggcc
      541 ttggtcaagt ctgaccgcta gcgcacgcgg tgcgatgctg cgcaagctcg gcgatctgat
      601 cgcgcaaaac gccgagcact tggccgacat tgaggtacaa gacaacggca aactgaaagc
      661 cgagatgttt ggccagatgc aatacatgcc gcaatggttc tactactttg gcggtttggc
      721 cgacaaaatc gaaggggcgg tcatcccagt cgataagcct ggcatgttta acttcacacg
      781 ccatgagccc tatggcgtgg tcacgatcat caccccttgg aattcgccct tattgcttgt
      841 ggcctggaaa ctggctcctg cgcttgccgc cggcaacgcc gtggtcatca aaccctcgga
      901 attcacctct gcgtccatgc ttgagttcat gacgctcgtt gaacaagcgg gattccccaa
      961 aggcgtggtc aacgtggtca cgggcttggg caatgaggtc ggcagcgccc ttgtagagca
     1021 cccgaaggtc gcccgcgtgg ccttcaccgg tggcgagatg ggcggcatca aagtcgctga
     1081 agccgcggcc cgcggcttaa agccagtatc gcttgaactt ggcggcaagt caccgaacat
     1141 catttttgaa gatgccgata tcgacaacgc cgtcaaaggt gctgtctcag ggatttttgc
     1201 ggccacaggc caaacctgtc tggctggctc gcgcctgctt gtgcatgaaa gcgtgcacga
     1261 cgaggtcgta gaaaaactcc tggcactggc taaaaccgcg caaatgggtg accccatgca
     1321 gtcgagcacc caagtcggac cggtgaccac ccgcccccag tacgagaaaa ttctgtctta
     1381 catcgatgtc gccaaaggcg aaggcgctca gtgtgtactc ggcggtggcc ccgctgctcg
     1441 cgctgaatgt ggcgagggct ggtttgtcga gcccaccatc tttaccggcg tgaacaacca
     1501 aatgcgcatt gcacaagaag aggtgtttgg gccagtgcta tccatcatca agttcaaaga
     1561 cgatgatgag gcagtcgagt tggccaatga cgtgctctat ggactggcag ccggtgtctg
     1621 gacccaaagc atcaatcgcg cactcgatgt gtctgcgcgc attcgggccg gcaccgtgtg
     1681 ggtcaacgcc tatcgcgtgg tcagttacat gtcgcccttt ggtggctaca agcgctctgg
     1741 gctcggccga gaaaacggtc aggccatgat ctacgagtat ttgcaaacca agagtgtctg
     1801 gatcaatacc aacaaagaca tcgccaatcc gtttgtgatg ggctaaggca gcaacttgag
     1861 accctctagt agcgacaacg cccacaatac cgacagtacg gcagcctcat cacgttctta
     1921 tcaccgcgcc gattggcagg tgatcaagga cttgctgccg tacctgctgg cctacaagtg
     1981 gcgcgtggcc tttgccttgg cttgcatgat tctggccaag ttcgccaact tgggcgtgcc
     2041 catcgtgctc aaggacatgg tcaacgccct tgatgtcaac accatggccg gtgctttgct
     2101 ggtcgtaccg gttggtttga tcatcggcta tggactgctg cgcctgtcga cgtcgatctt
     2161 taccgaactg cgcgaagcgc tgtttgcgcg cgtcacacaa aacgctgtgc gccaaattgc
     2221 gctcagtgtc tttaaccacc tgcaccgatt gtcactgaat ttccatctgt cacgacagac
     2281 gggtggggtc agtcgtgata ttgagcgcgg cacgcgcgcc attcaaacgc tggtgtcgtt
     2341 ctcgctctac agcatattcc cgacgttctt tgagtttgca ttggtgttgg gttacctggc
     2401 gattttctat gacatctggt tctcgctaat aacactagtc gcgctggtgc tctacatcat
     2461 cttcaccatc gtggtcactg agtggcgcag ccaactgcgt cgcaccatga accagcttga
     2521 tacccgtgcc aatcaaaaag ccgttgatgc attgctgaac tttgagacgg ttaaatactt
     2581 cggcaatgaa gcctatgagt cagatcgcta taaccagagc atgcagctat accaaaaagc
     2641 ggcaatcacc tcacagaagt cgctcgctgc gctgaacctg ggtcaacaaa tcatcatctc
     2701 ggtgggtttg gtgctcatcg tctggcgtgc cgcggttggc gtagcagacg gcagcttgac
     2761 gcttggcgac ttggtgttgg tcaacacctt gatgattcag ctctacatgc cactgaactt
     2821 tttaggggtg gtttaccgtg agctcaaaca atccaccgct gacattgacc gcatgttcaa
     2881 tctgctcaac gagcagcaag acattaccga ctcgccaggc gcaccggcgc ttgtcgtagc
     2941 agacccaagc cgtgggccgc gtgtggtgtt tgaccgggtg agctttagtt acgacaagca
     3001 acggccagtg cttaagaaca tcagttttac ggttgaagct ggcaccacca ccgctgtggt
     3061 tggccgctca ggcgcaggta aaagcacgct gtcgcgcttg ttgtttcgtt tctacgatgt
     3121 cgatgaaggt cgcatcatgc tagacggtca agacctgcgt gaagtcacac aagcgagctt
     3181 aagagcggcc attggcatcg tgccgcaaga caccgtcttg tttaacgaca cgattggcta
     3241 caacattcgt tatggtcgac ccgatgccac tgatgccgag gtgcacgccg cggccagagc
     3301 cgcgcagctc gagagc
//
LOCUS       DATBNL010000266         3057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_2902, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000266 DATBNL010000000
VERSION     DATBNL010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2902"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VIC30_04340"
     CDS             complement(<1..748)
                     /locus_tag="VIC30_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803647.1"
                     /translation="MALALISLQSVQLAFGHHALLDHADLAIEGHERIGLIGRNGAGK
                     SSLLKLLDGRIQPDDGKINRVDGLRTATVEQEPTLQGTTILQELGAPEHQPTAEPWER
                     EVVARQWCERLGLEPDTPISALSGGMAKRVALAGAMLSEPDLLLLDEPTNHLDLDGIA
                     WLEQQLKQWRGSVLLITHDRRFLDVVATRIIELDRGKLLSFPGNFAKWQEQKQAWLNA
                     EQLANARFDKLLAQEEVWIRKGIEARRTRNE"
     gene            806..1194
                     /gene="rnpB"
                     /locus_tag="VIC30_04345"
     ncRNA           806..1194
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VIC30_04345"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            1411..1839
                     /gene="mraZ"
                     /locus_tag="VIC30_04350"
     CDS             1411..1839
                     /gene="mraZ"
                     /locus_tag="VIC30_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEY7803648.1"
                     /translation="MFQGSSALTLDAKGRINVPTRHRDVLIEQAYARLTITRHPDGCL
                     LVYPRPEWEKKREQIAAFPMQARALQRLLLGNAQDVEIDSAGRVLVAPELRAAAGLKR
                     EAMLLGMGGHFELWDAQALADREAQDLSGGIPEALETFSF"
     gene            1846..2808
                     /gene="rsmH"
                     /locus_tag="VIC30_04355"
     CDS             1846..2808
                     /gene="rsmH"
                     /locus_tag="VIC30_04355"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEY7803649.1"
                     /translation="MESGHRTVLLEETVQALVPNERMPAGGVFVDGTYGRGGHSDALL
                     KRLGAQARLLVIDKDPQAIAVAQARAADDPRIVCIHGGFGQLPALLAAQGVQTVDGVM
                     MDLGVSSPQLDQAERGFSFMRDGPLDMRMDTSQGQTAAQWLAEASLDEVREVVRDYGE
                     ERFALQIAKAIVARRAVRPIERTLELADIVAAAVRTREKGQHPATRTFQAIRIYLNRE
                     LQELDYALEATLSLLNPGGRLAVISFHSLEDRRVKQFMQANSKVPAALARLPLREDQL
                     PKPLLTGMKRIKPSAQEVAANPRSRSAVLRVIERTEAPFGAGGV"
     gene            2808..>3057
                     /gene="ftsL"
                     /locus_tag="VIC30_04360"
     CDS             2808..>3057
                     /gene="ftsL"
                     /locus_tag="VIC30_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEY7803650.1"
                     /translation="MGRAVLVMGLLLMLAALSLVTARYQSRHLFIQNEQLKSQAAELE
                     VVWRHLQLERAELSRNARVDEIAREQLRMVPITPGRTLY"
BASE COUNT          660 a          761 c          930 g          706 t
ORIGIN      
        1 cttcattgcg tgttcgcctg gcttcaatgc ctttgcgaat ccacacttcc tcttgtgcta
       61 gcagtttgtc aaatcgggca ttggccagct gctcggcatt gagccaggct tgcttttgtt
      121 cttgccactt agcaaagttg ccaggaaaac tgagcagttt gccgcgatca agctcgatga
      181 tacgagtggc gaccacgtcc agaaaacgcc ggtcgtgtgt gatcagtaaa acactgccgc
      241 gccattgttt taactgctgc tcaagccaag cgattccatc aagatcaagg tggttggtgg
      301 gttcgtcaag caacaacaga tcgggttcgc tgagcatcgc gccagctagg gcgacacgtt
      361 tagccatgcc accagacagt gcgctaatgg gtgtatcggg ctcaagtcca agacgctcgc
      421 accattgtct tgcaaccacc tctcgctccc agggctcggc agtcggttgg tgttcgggcg
      481 cgccgagttc ttgcaagatc gtggtgcctt gcagtgtggg ctcttgttcc acggtggccg
      541 tgcgcaggcc atcgacgcga ttgatcttgc catcgtctgg ttggatgcga ccatcgagca
      601 gtttcaatag agaagacttg ccagcgccat tgcgaccaat caagccaatg cgttcgtggc
      661 cttcgatggc aaggtctgcg tggtcaagca aagcgtggtg gccaaatgcc agttgtacgg
      721 attgaagaga aatcaaagct aatgccattt gaatttgcta cagaagcagt attgtcgcag
      781 gttgtgtggc ctacaatagg aatgcgggat gagctgggca atcgcgacat cgaaaggtat
      841 cgaggaaggt ccggactcca tcgggcaggg taacggctaa cggccgtccg gcgcgcaagc
      901 gctgaggact agggccacag agacgagtct gttgcgaggg tgggcgtgcc cactccgcta
      961 cggttacacc gtagcgcatg gtggcttagg cgatcaacgc agcagggtga aacgcggcaa
     1021 cctctacctg gagcaacacc aaataggcat gtgcgcacct tcgggtgtaa agggcggccc
     1081 gtccgagcat gcgggtaggt ggctagagtg tgtcagcaat ggctcaccga gaggaatgat
     1141 tgccagccac tgcaaagtgg cctacagaat ccggcctata ggctcatccc gtaatcatgt
     1201 tgcatgtgat gtgattattt cttaacacag cactttcaca gaaaacccta agacattgat
     1261 ttcacgctga aaatgagttt cagtgggttc gtgtttgtgc gctaagtcct tgtcatcatt
     1321 gaaaaatttg aacaaatttg tttgaccggt gattactttt gccttagagt ggtgaaaagt
     1381 ggatttttgt gtcgaattgt ggggtatatc ttgtttcaag gcagcagcgc gctaacgctc
     1441 gacgctaagg gtcgcatcaa cgtgccgacc cggcatcgcg acgtgctcat cgagcaagcg
     1501 tacgcacgcc tgacgattac acggcacccg gacgggtgct tgctggtgta cccccgacca
     1561 gaatgggaaa aaaaacgcga gcaaatcgca gcctttccga tgcaggcgcg tgcattgcag
     1621 cgtttgttac tcggtaacgc acaagatgtg gagatagaca gtgccgggcg tgtattagtg
     1681 gcccctgaat tacgagctgc cgccggtttg aagcgcgaag caatgctact tggtatgggt
     1741 gggcattttg agctttggga tgcacaggca ttggctgatc gtgaggcaca ggatttgtca
     1801 gggggaatac ccgaggcgct tgagacgttt tctttttaga ttgtgattga gtctggccat
     1861 cgcaccgtct tgcttgagga aacggttcaa gcactggttc ccaacgaacg gatgcccgca
     1921 ggtggtgttt ttgttgacgg cacctacggt cgtggtggtc attcggatgc attgcttaag
     1981 cggctaggtg cgcaagcgcg gttgctagtg atagacaagg atccgcaggc catcgccgtg
     2041 gcgcaagccc gagcagctga tgacccgcgg attgtttgta ttcacggggg ctttgggcag
     2101 ttaccggcgt tgctcgctgc ccaaggcgtg cagacagtcg atggtgtgat gatggatttg
     2161 ggggtgtctt ccccacagct cgatcaggct gagcggggct tctcatttat gagagatggt
     2221 ccgcttgaca tgagaatgga tacgtcgcaa ggacagacag cggcgcagtg gctggcagag
     2281 gccagccttg atgaggttcg ggaggtggta cgggattatg gcgaagaacg gtttgctctt
     2341 cagattgcaa aagcgattgt tgctcgccgc gcggtgcggc ccatcgagcg cacgctcgag
     2401 cttgccgata tcgtcgccgc cgcagtccgg acccgggaaa agggccagca tccggcgaca
     2461 aggacgtttc aagctatacg gatttacctc aatcgggagc tccaagagct tgattacgcc
     2521 ctcgaggcaa ctttgagcct gttaaatcca gggggacgtt tggcggtgat cagtttccac
     2581 tcgcttgaag accgcagggt caagcagttc atgcaggcaa acagcaaggt gcctgctgcg
     2641 ctggcacgcc tgccgctgcg cgaggatcag ttacccaaac ctttgttgac gggcatgaag
     2701 cgaatcaagc caagcgccca agaagtggca gccaacccac gctcaaggtc cgctgtttta
     2761 cgggtcattg aacgtaccga agcgccgttt ggtgcgggag gcgtgtaatg gggcgtgcgg
     2821 ttttagtgat ggggcttttg ttgatgttag ccgcgctgtc gctggtgacc gctcgttatc
     2881 aatcacgtca tttgtttatc cagaatgagc aacttaaaag tcaggctgct gagctcgaag
     2941 tggtttggcg acatttacag cttgagcgcg cagagctctc acgtaatgcc cgggtcgacg
     3001 agattgcgcg cgaacagctg cgcatggttc cgatcacacc gggccgtacc ctctaca
//
LOCUS       DATBNL010000267        31578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_22843, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000267 DATBNL010000000
VERSION     DATBNL010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 31578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31578
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22843"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VIC30_04365"
     CDS             <1..751
                     /locus_tag="VIC30_04365"
                     /inference="COORDINATES: protein motif:HMM:NF015737.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEY7803651.1"
                     /translation="TDTLGGMVLGTQRNINDQTSLGFAMAYGASNTQLPSNMGSGSSQ
                     NLQLMAYGSRRLDDGYFVQGGLGLGGNVISANRSLSLVGSSYNATIKTANITANLALG
                     QFVQKARWNYEWQVGLNYLGMRTFGFTDSGGANAFSVSGQVTDNTSVQPTLGFRVGIP
                     FHANETEWQFLATANYAYELADNRAYLNTEVLDENLRIESSDIGRSRLTLGLVLSANI
                     SESSVLSLSVNNQFASNWNAFSAFANLSWRF"
     gene            complement(774..1118)
                     /locus_tag="VIC30_04370"
     CDS             complement(774..1118)
                     /locus_tag="VIC30_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803652.1"
                     /translation="MNLKYLAVLVVGSILAGCASTTATALNKADGSIEIISKSSAEDH
                     ALEAALDKGIQQCKASGKNFVVIDRRSTYQGVDPNVRAAINVASILTKGGFYGAGTSS
                     SDWQVVVTGKCQ"
     gene            1401..2177
                     /locus_tag="VIC30_04375"
     CDS             1401..2177
                     /locus_tag="VIC30_04375"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7803653.1"
                     /translation="MKPLNESVLRSLNNDAFATLLSQAASYEMLARPGLQLTLSNEPV
                     ADLNMLVVGAGAEHQHFRYMVNLCLERGLPFLVMIYPEAGAAFDQLASGMGLVFATEF
                     PIMVRDDLHLEPSGNHEVQVVRAVGDEDARANAEVSFSAFHIPVDSVLRSVPASFFDT
                     TGADVYVARLNGDAVGSVALTYHGDTCGVWAMGTDATRQRGGIGRRLLSTAMAQARDT
                     VGIRRFFLGATQAGFRLYESLGFKTVCAARVWVSGTTNQA"
     gene            complement(2232..2579)
                     /locus_tag="VIC30_04380"
     CDS             complement(2232..2579)
                     /locus_tag="VIC30_04380"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY7803654.1"
                     /translation="MSFAAWCKSGTHHYFVQCGLPRWRDMQALLGCVAAPMLKLHAKY
                     HNPSTFGDVLDVHTKVEQWRGKVFVHTHRIMRDELLICEGRQTRALCVKTDEGRIKAV
                     TIPEFVMTACGVD"
     gene            complement(2623..3624)
                     /locus_tag="VIC30_04385"
     CDS             complement(2623..3624)
                     /locus_tag="VIC30_04385"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY7803655.1"
                     /translation="MQHRKLGQDGIAVYPVGFGAMSFTNFYGPTSEQESHAILDRAME
                     VGLNLLDTSNVYGQGASETVIGNYLKANPAAKDFFKIATKGGITRKADGTGNTFENSA
                     EHLESELNKSLTRLGVEAVDLYYIHRRDPSIAIEEVTETLAGFVKAGKVKAIGFSEIA
                     PASLRRAHAVHPVAAVQSEYSLSTRAPELGLTQTCAELGLALVAFSPVGRSLLTDTPL
                     SFEAAQNLPFLVKNPRFMEPNYSANIKATDAFRQLASDFGISSAGLAIAWLLSRGEHV
                     IPIPGTRSVAHFNQLVEGANRELSPPELKAIDQILPVGWAHGDRYSRAQWEGPEGYC"
     gene            4276..4764
                     /gene="tssB"
                     /locus_tag="VIC30_04390"
     CDS             4276..4764
                     /gene="tssB"
                     /locus_tag="VIC30_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004530571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HEY7803656.1"
                     /translation="MSNDGSVAPKERVNITYKPATGDAQEEVELPLKLLVVGDFTEQQ
                     DDRPIEDRKPISVDKDNYDQVLKAQNLSLDLSVPNKLEPESDDNLAVNLKFESLRDFE
                     PDALVEKVPELKEIIELRNALKALKGPLGNVPDFRKKLQALVQDENTRAKLLAELGIE
                     QK"
     gene            4783..6264
                     /gene="tssC"
                     /locus_tag="VIC30_04395"
     CDS             4783..6264
                     /gene="tssC"
                     /locus_tag="VIC30_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HEY7803657.1"
                     /translation="MSEEAKKEDAAPAGDQSGSLIDDLLATSKVRPGNESYDITRQGI
                     QTFVSSLLEPGKVTDRITASLADEMIAELDKKLCRQVDEILHHPDFQRLESGWRSLKF
                     LIDRTNFRENIKIEVMNASKEDLLSDFEDAPEVTQSGLYKNCYTAEYGQFGGQPYGAI
                     IANYEFGPGSSDIKLLQSCASVAAMSHAPFIAAAGAEFFGVDDFTKLPDLKDLSSIFE
                     SPVYTKWQGFRASEDARNVGLVLPHFLLRTPYGQDTTPAKTFNYEETVNEAHDKFLWG
                     NAAFTFASRLTESFADYRWCANIIGPRGGGAVNDLPIYNYEAMGEIQTKIPTEMLISE
                     RREFELAEQGFISLAMRKNSDNAAFFSANSCQKPKFFGNTKEGKEAETNYKLGTQLPY
                     IFVVSRLAHYIKVLQRENIGTWKERADLEGELNNWVRQYVADMDAPGPEVRSRRPLRS
                     AQITVSDVEGDPGWYKVSMLVRPHFKYMGASFTLSLVGKLDKS"
     gene            6302..6790
                     /locus_tag="VIC30_04400"
     CDS             6302..6790
                     /locus_tag="VIC30_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009915381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hcp family type VI secretion system effector"
                     /protein_id="HEY7803658.1"
                     /translation="MPMPGYLSVNGQTQGNIEGSCNIKQHEGKILVQGVDHTIEIPKS
                     IQTGLPTGKRIHGPLRITKEIDKSSPKLFQALTSGERITDAKLEYYLISKDGKEELYY
                     TVEIKNAIVTSMHKYVPCCLDPQNKTMGHMEDVSFTYETIIETYTPDGIEAQDSWTDP
                     KQ"
     gene            7289..9925
                     /gene="tssH"
                     /locus_tag="VIC30_04405"
     CDS             7289..9925
                     /gene="tssH"
                     /locus_tag="VIC30_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018441143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="HEY7803659.1"
                     /translation="MQIVEFKGLVDRLNPLCRDALENAAGACVARNQYEISVEHFLTK
                     LIDDPRGDVQLVLKQLEMDPSRLLRALEQSIESMQTGNTGRPQFSALLPELFADAWLV
                     ASVELFESSIRSAALLAAFVERSSFYAQNTYAALLKDLNKTRVMDALAIVASNSLENV
                     TATASMSSATSANGGGLASGQSAIARFCEDFTAKARENKVDPVFGRDAEIRQMVDILA
                     RRRKNNPICVGDPGVGKTAVVEGLAVRVVENDVPEVLQGVTILGLDMGALEAGAGVKG
                     EFEKRLRGVIDEIKASPNPILLFIDEAHTLIGAGGAAGNNDAANLLKPALARGELRTI
                     AATTWSEYKRYFEKDPALARRFELVKLDEPSVEMAVQILRGLKERYEQVHRVIIRDDA
                     LRAAAELSDRYITGRQLPDKAIDLLDTACARIKVNLSSKPDFIEDLERQLQMLAREKQ
                     GLTRDRDNRIEVDEQRLISIDEETKSLQDRLAQRQQDFDAQLTAAREVLKQRTQLSQA
                     RETEQNEDISAAERALDVAETHFSQLQAIEKLVFVDVSPDTIAKVVSDRTGVPLGKMM
                     RDQASAALAMQSTLIQHIKGQDHAMHQIAEVLKSSRSGLRDPDQPLGIFLLVGPSGTG
                     KTETALSVADIMFGGEQSLISVNMSEFQEKHTVSRLVGSPPGYVGYGEGGVLTEAVRQ
                     RPYSVVLLDEVEKAHLDVVNLFYQVFDKGVLSDGEGREINFRNTVVFLTSNLGLDVIT
                     ELCSGDEMPSAETITAAIRPILSNHFKPALLARMTIVPYLTLPQAVLREIVDIKLKKV
                     SDRMLSTNKITLDVSAQAADAIAARCTEVETGARNIDFILRGTILPLLSDRLLASMSQ
                     SDSVTTAKLGLDDDGHFTVEFA"
     gene            9935..10726
                     /locus_tag="VIC30_04410"
     CDS             9935..10726
                     /locus_tag="VIC30_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803660.1"
                     /translation="MSDRCVWMIVVGNTDTAARSTAATLAPYGVVIQGQALNVDQANG
                     WLVCAQSAAQASARFVVVVSSSEDYKRPEVRRQLSLFRLFLQTFTKSTINGMVNLVDS
                     GQADARSVDLPGTPILADWETITTDSWAARAVARLHSPKRPSWPVALGLFGQEKIGTW
                     LEVQPMPGQSAPGCLLGVSGNEAKISFHAAGPAGCLPDRSINEYELKGLTFSCAGHDF
                     HAWGLQNALPPEQAYFARLENEPDLLAVSTLPNGELSEVHLMCLR"
     gene            10748..12397
                     /gene="tssA"
                     /locus_tag="VIC30_04415"
     CDS             10748..12397
                     /gene="tssA"
                     /locus_tag="VIC30_04415"
                     /inference="COORDINATES: protein motif:HMM:TIGR03362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssA"
                     /protein_id="HEY7803661.1"
                     /translation="MTPDVQKLLQPLPPDAPGGQDPRDTDTYAQMSLEIDKLASLTAE
                     TLPNWSRIEQLASDYLEKQSKDYLVASWLSEAWTRRYELSGVAAGLTLIAGITAHYWD
                     TAIPPVKRLRGRRNAISWWTDRVNQLLEKQTDDTITAELSESLVKAAKDLDELLAIKD
                     PDANSMLTLIGHLERIPVEQPPAVEQVPSTDATAHNAPPEPSTGALTDPTSTAQATPN
                     QPPETTAGTAPALPQVPEGKLEIKSLSDLTSLLRPVQDYIARVGPALFDFDHANPLSI
                     QFTRFAARAHISEMPPAENGQTAISPPAVAISDAFERISNSKNAEGQIEFCESRIREY
                     PFWLDLDYHSAKGYRSLGPSGAKMRDTIIDLLLNFLRRMPGIEHYSFSDGTPFARTET
                     IAWIERCRQERSGQGPVDAFGLTRQEANSLLSDGKTQEALGVLQTFISNTRSQRDQFR
                     ARLALVELNLEQADQANALSLVQPLTDDCLRLNLDQWEPELANQAWQLSARIAQQLLK
                     SDDPSIPLAVRDRYQKAFDEAIVHLASLDFESAAQFTKAAT"
     gene            complement(12433..13068)
                     /locus_tag="VIC30_04420"
     CDS             complement(12433..13068)
                     /locus_tag="VIC30_04420"
                     /inference="COORDINATES: protein motif:HMM:NF023482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3540 domain-containing protein"
                     /protein_id="HEY7803662.1"
                     /translation="MHNVKRIRSTEVPMQPTVSAGLSRFDVLSVSDRYVYVQQPDDTK
                     IYEAIRAASCLLEPTCGDQVLVHFDGSDQPAYVIAVLARADQSHERSFKLSDSVVLVT
                     SVNHLQINAQSFGISSEQGDFKIDRLNGTYRHVTEQADSVSLVANEATHKVGRFVSRL
                     RDSFRLIEGLDRTQASNIDQTALYQISMSADITKVSAQHVVKVQAKKIDLG"
     gene            complement(13100..13492)
                     /locus_tag="VIC30_04425"
     CDS             complement(13100..13492)
                     /locus_tag="VIC30_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010109470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4150 domain-containing protein"
                     /protein_id="HEY7803663.1"
                     /translation="MFVCTMDDGMTMAMPDVCLTPAPPAPPLPIPYPNTGELMMAVPP
                     VPTVLICGAPALNKASMVPISMGDEPGVNGGVSSGTFIGPVEFVMGSMVVTIGGQPAV
                     RLGDPIKGNNGNAFGTVIVPSQPLVMAS"
     gene            complement(13511..14563)
                     /locus_tag="VIC30_04430"
     CDS             complement(13511..14563)
                     /locus_tag="VIC30_04430"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEY7803664.1"
                     /translation="MSDLIDHLSTTRSSQNGQFDGLSLAGMDLTECRFSGCSFKATDM
                     SKASLNKSIFVSCDFTQTKLTAADLSNVVFQACTFGETDATEVVLAGAIIAKSELEKV
                     DFGRANLQELAFDQSSLVSVSFNGANLIKAALLKTQIDRCDFSGADLRRATMTGLDLQ
                     TCTFKGSQLGEAYFEGSNLSGHAFEDCELKGAIFYKAILQRVDLAKRELQSVFFSHAD
                     LTSAKFQSANLKQVSFEQALVDQSDFTGAQLNACVLPGVSAKDAVFEGASLTKVVLTG
                     ADLSGSVWRAAALSSCELSKAKLDGADFSQATLQKVNLHDASQHQTVWDKAILSDVKG
                     TDPERLAAEKWQPPSN"
     gene            complement(14578..17124)
                     /locus_tag="VIC30_04435"
     CDS             complement(14578..17124)
                     /locus_tag="VIC30_04435"
                     /inference="COORDINATES: protein motif:HMM:NF021456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2169 domain-containing protein"
                     /protein_id="HEY7803665.1"
                     /translation="MRISQPAGCEVTTHILRRLSGQFEVSLAVWHVFTLGSEASQVED
                     SRVLWKLAKQHWPARALDEGFPKAGGEFFCFGVAYPPADLSQGPFIASVRVGQAKRDL
                     AIYGQRIFGLLGSVQEVTPPRNPVPISLQNAFGGASHATNPDGVGYLAKSGQAAPSVE
                     DPNDPITSPTSRAEPAGFWPLPVTSEQRSQHLGTFDRQWLEKDWPNFAPDTNMAFFQM
                     AHPAQQLPGSLVGDEVGEIVGMHPTQTRLLFNLPGKRVRCVFKRTHSTNDLFEGWAHT
                     TMQPETLYLFPNEGVGVLLHRGLVQVDRADALDLAEVLFQLEPASLNTPPSDIMMQLY
                     RARWLQPTEPPATTSDGNLAASTAAIAAAASAAAPKRVTRSGNVKLWPEFEYVLSQPG
                     ISAETAQAIREAKDPVEALAIELRRQLRDGRAAYEAAIKDSGLTEQTYLQALSEVPQI
                     KQVLGVNAGSFSLSVELERLTGFVDTLVDNLRRSKPTGSSEVQTGGQVASESAGEVPD
                     NAPDAETLAQIRGFMQEQASKPTQFRGMNLSGLYLVGLDLAGQDFSHAICEGTQFRGC
                     NLAGATFSEAILTRADFTHSKINASDFSGSVCQQATFDEAVLTQSNLTNADLTDCSFK
                     GACFDGAILKKAKLSQSDLTGASFVRVVATESAFNESLIDQCDFTGAELGRVDFIKAR
                     ISNSKFNEVTSDRLEFSGAALKDCQFTGSVLRASVAMLKPLFDGCRFENTDLSGSNWS
                     TATIINSLFSACTLDKLDLSSGQLQKTRFSRSQAFSLSFFSCTMQAVDLVQNNLMQAS
                     FHGTDIKSSSMMGNNMYGADFTESKFDDQTAFEGNVILKTCLVWRGQSSA"
     gene            complement(17128..18702)
                     /gene="tssI"
                     /locus_tag="VIC30_04440"
     CDS             complement(17128..18702)
                     /gene="tssI"
                     /locus_tag="VIC30_04440"
                     /inference="COORDINATES: protein motif:HMM:TIGR03361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein TssI/VgrG"
                     /protein_id="HEY7803666.1"
                     /translation="MATSEQAQQPRFEFKLQAKPDAVFHVTEIQGDEAISEPYVFKIV
                     FGCSDFELQADDFLLQPALLKIFTTDGESCMNYSGLVFEFALLRRVNNYVLYEVVLRP
                     RIWKMSLNRITDVYCEEKTVPELIAQKLREAGLTDLNFEQRLKDSSVFRKRSLVCQFY
                     ETDLAFISRYMEAEGIYYFFDQSEEFNERLIMVDYRQAQTNSMKALYYFDTENMPTDM
                     QDNRVTNLTMREQVTTGKVVVQDFNYRKAALEDTLKSDVQVNPRGYGTTMFWGYNLRE
                     VKETERMAMLRKQELLCHQFSIDAETTAIDVYSAAGVALQQHYQSALNRDYLVVRATH
                     AGRQAYAWFEGSQLLGERGSQVGTYYRCKFKGVDHQLQYRSPRKTPWPFISGTLSGIV
                     DDESEGKYAQLNDYGQYKVQFLFDLTDKNPNRGSSWVRMASVYSGQGHGMAFPLLKGT
                     EVVIGFMGGDPDQPIILGAVPNSENPNVLNANNSHLGGFQTDSGNYLVTNDTRGQEGV
                     HMWSPGSNTHFYIGKF"
     gene            complement(18736..20013)
                     /locus_tag="VIC30_04445"
     CDS             complement(18736..20013)
                     /locus_tag="VIC30_04445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803667.1"
                     /translation="MSDSGPYNPTLGKGGIFQWSAGAKFTTMLGGDYKSTLGAKNEVM
                     LGVANSFAAGTSNAFKLTYDVGLTFGKSYAYKAASDVSFAKSKIEIQEYGGSRCLDLF
                     QASAGLGPIQRAAFQAQRQAQVIPISVMIAVDIVAAAGTLAISGFGSGFKSQTSASPA
                     GIASITGTLVAISGVTALVSILIVEYLDSQRGLTKPETWQPNATIQASSHNGIFIGYQ
                     QSIPEEIYSSFKQNGQGSVLRVSRGGLPIYGFSNIPGLALDADLNEKHIEYLGQVDDL
                     PAPEETYLNMTEQEVSIAARMVNLTGNTTPLTPLPDSSMDATFQDIKLVATELSAEGP
                     GAQLQLEGSSQMASLVAQEAPGVGSSVKATPELLLLKSGETSMVQLGAAEVSVTSAAV
                     TVSAEASVEMAAPEVSITGDATVSITGALVRIG"
     gene            complement(20074..23946)
                     /locus_tag="VIC30_04450"
     CDS             complement(20074..23946)
                     /locus_tag="VIC30_04450"
                     /inference="COORDINATES: protein motif:HMM:NF025689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion protein IcmF/TssM N-terminal
                     domain-containing protein"
                     /protein_id="HEY7803668.1"
                     /translation="MSKILTFLLVIVLLALLGVLSWMLVLYLDWPVWGAFAVFFGVLG
                     LYFAIKAAKRFFLISRSKSKLLAAQRADAMASAQKVDFKHVLNQQVKAALGLLKGSQL
                     RRFGNPVYVLPWYLVMGESGAGKTTAISRSRLMPMMRESLAGTDITQTANCDWWFFSE
                     AVVIDTAGRYVSPDGSELDQQEWDYLLELFAKYRSREGINGLVVVIDAPLLLSGDMQA
                     IERRGQSLRDRIDQVMRLFEKRVPIYVMISKSDQIYGFTGWANGLSDAESMQAMGYLS
                     DERTDIADEQVFAQEAIDTLRARLESLRLDLSMREADLTPEMLLFPGELARLKPGLQR
                     FLQATFGANPYLEHPFLRGLFLTSARQQPPEPSRLGELITAAASENGSDQGRRGLFIH
                     DIFSRILPIERGIALPGQIVSRWRHVTANLALVSWLSLCLAALVFLVVSYQSTSATIN
                     RLASIIPSEFSSEPTNERKPDIDRLTTGLVFVKLILQAEQDWRTRWLAFSPEVTRLED
                     KLKDTYVRQFRRLQDTEGSGPLDVKTLLEASEPAQQAYGMLALARYVNIVQARVNGAS
                     YSDLLAMPQVPKAVLQTVAPSIDGNVLSGFNELLAAAVGWSEPDDPYLTEVLRLDRAT
                     LLAQLSKTNQMQWLVDWANTLPDLSPISMADFWNPDGSSATGYQIKAGLTLAGQQRID
                     GFISELNQALQGSEGLNRQVDAFRRWYMERRLNAWRDMALGIEQGESLVPTEPQYRRV
                     ISSIGTQNSPFNLFLNRLTQEFQALPSSQSPSWLEFARYYTNLIVQAKRTQGSSFVNS
                     MNTISAVNNVAGQAMRASVEQGQNLVPSAITRARTDISLFESYLQARDKAVVDVLGGS
                     GAAMKMTSSYFGAAQAQQSADGGNPVLLDMSKQMAAFRKNSRFNTAQDEVIWQVIEAP
                     MNTINYYAFQQASCNIQDTWARDVMWKTHLAINPEEVSEQLFGDQGSVWSFVDGPAKS
                     FVNRLGGAFVPATKDGAQFPFAAGFIQFLNQAVSSRVSEVVRQKLSKASIQKSAKLTL
                     AAMPLGVNPGAKARPYAALLFVQCDQQQIELSNVNMQASDSFEWSPGKCGETRLEIEL
                     DNMTLVKRYPGPTGLATFVEEFADGARVFTPADFPAAMKQLDDLNVKEIAVRYEMSGR
                     QEVLDLAKDYDFVMQQTTPSTEPAVSRLTIDVPERAGRCWSAPSAATEALQVPRLIEK
                     EAEKKANPPPKPPEPPLPPIEPLKPAPTKEIVVQSGQTLFSIAKQYRVDLQILKALND
                     LSSDKILVGQKLLVPIWQNQPGDAATTN"
     gene            complement(23946..24614)
                     /locus_tag="VIC30_04455"
     CDS             complement(23946..24614)
                     /locus_tag="VIC30_04455"
                     /inference="COORDINATES: protein motif:HMM:NF021377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DotU family type IV/VI secretion system protein"
                     /protein_id="HEY7803669.1"
                     /translation="MVLCSYFIPLLAYVKALSRQSEPDPADVDAQLQLLIGQARDEAL
                     KDSVSLERFHEALFPVVAWTDERLALLPSWREDAAWRPYMLQRKLFHTTLAGVQFFEQ
                     MDKIDETDHELREVFLTCLGLGFVGKYSQTPNSPTLLKFKQSQYELVRGRESTPITAE
                     ESPLFSPAYRTASGGSKTGHRLGPRSKLALIIFIPLAILMGIAAWFDYQLVQTVSEIT
                     ARLP"
     gene            complement(24616..26004)
                     /gene="tssK"
                     /locus_tag="VIC30_04460"
     CDS             complement(24616..26004)
                     /gene="tssK"
                     /locus_tag="VIC30_04460"
                     /inference="COORDINATES: protein motif:HMM:TIGR03353.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HEY7803670.1"
                     /translation="MDISQQVFWHQGLFLQPQHFQHLERQLHFARTPFVRMLNPYPWG
                     IESLSIADSAITNRMFEIREIKAVLPDQSFLQYPGNMQVAARSFDKVWSNPDQPLSVY
                     LAVRRFSDANPNVTVVDSVSQAYEVDTRYASLSNPSTQRDVYSQGSEALVPTITYVAK
                     IVFDGEVDALEDHDVIALLQLTRDGEQVKLTGNKVAPVVALSASDDLTHMVRDIRDEM
                     LGRLRQLEEYKSPRGVNSEDLDANFLMMMQAVQVLNRHVPALTHVLDAKSVHPWEVYG
                     LLGQCIGELSTFSHRFDVYGRTSNNEQGLAPYDHHNLGGCFSMARELVGRLLGEIAMG
                     PDYSVTLQPGDTYYSGSVPLEYFTGRYRFFLVLQSDQIHDLSVGQILGSVRLSAPTVV
                     PDLIDYALPGVELFELPGPPQGLPRRSDARYFRIEQVSQGWQTVQEEGAVAFYWPEAP
                     EDARVVMIIIKG"
     gene            complement(26187..26990)
                     /gene="tssJ"
                     /locus_tag="VIC30_04465"
     CDS             complement(26187..26990)
                     /gene="tssJ"
                     /locus_tag="VIC30_04465"
                     /inference="COORDINATES: protein motif:HMM:NF024200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system lipoprotein TssJ"
                     /protein_id="HEY7803671.1"
                     /translation="MAGGTSDVLDLACIRDSFLRFSWPLLSTFFDENDTMFKTLPRSI
                     IIILAGVALTACGVTGGSSADKKKTAKAEVTWPFAKNGIMIELMSDVNLNFYANRPHT
                     MVLGVVQLEDEKAFPKLLTQPRDLANSLATGNLPKGALHLDRYVVSPDTRIVMKLDRV
                     QDAKYVGIVAGYYQFEPERSARYFRIPLNLASSGLVFKDYSAAPATLAMRLMLGPQRI
                     VDAVSLTHDPDAPAAIKQEVPVDNNNLEIEISPEVLRQTATEASSLMKL"
     gene            27346..27900
                     /locus_tag="VIC30_04470"
     CDS             27346..27900
                     /locus_tag="VIC30_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803672.1"
                     /translation="MTAHQKAVREQANTPWLVRNWQPLLGAAMGGAIGFKFTRNFGES
                     SEKWKWPTVAGGAVAGAVAGPGFTGGAYGLGTLAYSIWPTSLPLTVAFSLVGGVVGKV
                     VWDMVFPKNPALKKPKPGEYLADQVFYLETTCSKPERITYESAPYLVKYRHNGQTYSA
                     RVKYYPGARLPLQANGRPLYEIPN"
     gene            complement(27972..28982)
                     /gene="tssG"
                     /locus_tag="VIC30_04475"
     CDS             complement(27972..28982)
                     /gene="tssG"
                     /locus_tag="VIC30_04475"
                     /inference="COORDINATES: protein motif:HMM:TIGR03347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HEY7803673.1"
                     /translation="MATDVGRQAPDIVEELVARGDRFSFFQVIRLLRLQAQRLGKNPD
                     LAVRTTPRLGLGFPKTDLTSVERTDYGTYNVIANFLGLYGVDSPLPMFYTEDLLREQS
                     DGFTVNREFLDIFAQSIYPILYQTWLKTRPSVRVVEHRDQRMLAILYAFVGIDSPDEA
                     TMEPGIGALLRCGANFSRLTRTAAGLQSVIQACFPQAVVGVEQLMPVIVPIPQRQRCY
                     LGKQATSLGEDTHLGHQCLSHGGITLRLLELPSDLFLALLRGGQQHDRIRFLVDYYLI
                     EPLALRIELGLAAGQAAPIQLGSPVWSRLGANTWLLPGDHDEATHVTFNVATRRHSPL
                     WQ"
     gene            complement(28946..30676)
                     /gene="tssF"
                     /locus_tag="VIC30_04480"
     CDS             complement(28946..30676)
                     /gene="tssF"
                     /locus_tag="VIC30_04480"
                     /inference="COORDINATES: protein motif:HMM:NF017733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HEY7803674.1"
                     /translation="MATDYKTFYSAELRRLRQYSQEFARDNPALAPMLGTPSVDPDIE
                     RLLEGVAFLNGHTRHKLSDEFPEIAQELASILVPQILRPMPAATMMVFEPKAALKEPI
                     LIPSGTELAGKPVQDTSCRFQTTVDLVVADLFVERASWTTNSKNEPGVRIDLKTSAGS
                     PEFSLPESIRFFLGDNIETASVLLMLMQNYRVGVDLIDVSGNRFDVSDCVVFPGFGEQ
                     LVPQPDNGVPAFGLIRELLSFPDKFLFVALDGLHKKIGMLPTGSFAIQFQFERVSFAL
                     PELSRSSFMLHVVPAVNLFAQSAEPVELHHETPDYLVLPTGMSRQHHQVFSIESVIGL
                     RQGQVMQRKYVPFALLEFGARAAQPTYRTSVRPSMLGDWMETYLSVVYEPEEEPVPET
                     LSIELLCTNRWLAEELKLGEVSEPTSTSPERCAFRNITPVKGAVDAPTGEDLLWACIS
                     HTAMNFMSLGDTKTVQALLSLYNNFRTGVHSSRAVNKRQIEGISKLEISPQSMLYRGS
                     VIRGQAICMLCDQSNWPSIGAMYLWGCVLSRFFATYATINTYTIFQMRDADTGIEFQW
                     PPMLGDKPLI"
     gene            31170..31562
                     /locus_tag="VIC30_04485"
     CDS             31170..31562
                     /locus_tag="VIC30_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEY7803675.1"
                     /translation="MLENTALLVTALLFGGMVLYSFGFAAFIFNNLPAELAGPTIRKA
                     FPHFYIFVMVTALVAAVLLWSVNPTSAILMAIIAVTTLPTRQLLMPAINRATDTGQKS
                     RFKWLHTFSVLITLAHMAMAAIVLTRFV"
BASE COUNT         8121 a         8434 c         7620 g         7403 t
ORIGIN      
        1 gaccgacacg ctcggtggca tggtgttggg cacgcaacgc aatatcaacg accagacgag
       61 tctcggattt gccatggcct atggcgcaag caacactcag ttgccatcaa acatgggctc
      121 tggctcctca caaaacctgc agttaatggc ctatggttcc cggcgtctgg acgatggcta
      181 ctttgttcag ggtggacttg gcctaggtgg caacgtgatt tcagccaatc gttcgttgtc
      241 cttggttggc agcagttaca acgcaacgat aaagacagca aacatcacag ccaatctggc
      301 tctcggccag ttcgtgcaga aagctcgctg gaactatgaa tggcaagtgg ggctgaacta
      361 cctcggcatg cgcacatttg gttttactga ctcaggcggt gccaatgcgt tctccgtctc
      421 gggacaggtc accgacaaca catcggttca gccaactttg gggtttaggg taggtattcc
      481 gtttcatgca aatgaaaccg agtggcagtt ccttgctact gccaactatg cctatgagtt
      541 agctgacaat cgggcttatc tgaacacgga ggtgctagac gagaacctgc gcatcgagag
      601 ttcagacatt ggccgcagtc gcctcacgct agggcttgtt ttgagcgcaa acattagcga
      661 gagctcagtt ctgtcgctga gcgtaaacaa ccagttcgcg tcgaactgga acgctttctc
      721 agcgttcgcc aacctgagct ggcggtttta gttcgttgag ccgtcagaac ggcttactga
      781 catttaccgg tgactaccac ttgccagtcg cttgaagagg tgcctgcgcc ataaaagcca
      841 cctttggtca gaatgctagc cacattgatg gcagcacgca cattcggatc aacgccttga
      901 taagtggatc gtcgatcaat gaccacaaag tttttaccac tggctttgca ctgctggatg
      961 cctttatcta gcgcagcctc gagcgcatgg tcttcggcac tcgacttact aatgatctca
     1021 atactgccat cggctttgtt aagcgccgtg gccgtggtgc tggcgcagcc tgcgaggatg
     1081 ctgccgacca caaggacagc aaggtacttt agattcatta tctgttcctc agaggtttta
     1141 acagttatgc atcgcatgaa acaatgatgg aatcgtacat gaggttttgc gtaaaaacca
     1201 atactacgtt cttgtcctat gatcttacga gaacctaagc acggtctgat tgcgagttgt
     1261 gtctagtctc gaattaggca cctaagcccc aagcacaacc atctatcagg atcagagatt
     1321 gcagctaatt ctaaaaagcg atgcagtgca ggggaaaact cctctataga ataaggttaa
     1381 cgtaggctag gggtactgca atgaaacctt tgaacgaatc agtgttacgt agcctgaaca
     1441 atgacgcttt cgcgacgctt ctgagtcagg ctgcatccta tgaaatgctt gctcgacctg
     1501 gtctgcaatt gaccttatct aatgaaccgg ttgctgacct gaacatgttg gttgttgggg
     1561 ctggcgcaga gcaccagcat tttcggtaca tggtcaattt gtgcctggaa cggggacttc
     1621 cattcctcgt tatgatttac cccgaggctg gcgcggcgtt tgatcagctt gcaagtggta
     1681 tgggtttggt ttttgcgact gaatttccaa ttatggtgcg tgacgacctg catctcgagc
     1741 cctccggcaa ccatgaggtt caagtcgttc gcgcagttgg ggatgaagat gctcgcgcaa
     1801 atgccgaggt ctctttctcg gcgttccaca ttcccgtaga cagtgtgctt cgatccgtac
     1861 ctgcttcttt ttttgacaca acaggtgccg atgtttatgt agcccgactc aatggcgatg
     1921 ctgttggcag tgtcgcactc acttatcatg gtgacacctg tggtgtctgg gccatgggta
     1981 ccgatgcgac acgacagcgt ggtggcattg gtcgtcggct actatccaca gcaatggcac
     2041 aggcgcgcga cacagttggc atacgacgtt ttttcttagg ggcaacccaa gccggtttcc
     2101 gcctttacga gagtttgggt tttaaaactg tttgtgcggc cagagtctgg gtttcgggta
     2161 caaccaatca agcttagtta accgtgaaga ttctcgatat tgccgagtcg gcttcaacaa
     2221 gctaataaag gctagtccac accacaggca gtcatcacaa actcagggat cgtgactgcc
     2281 ttaattctgc cctcgtcggt tttgacgcac agtgcgcggg tttgacggcc ttcgcaaatc
     2341 aacagctcat cgcgcatgat gcgatgtgtg tgcacaaaca ctttgccgcg ccactgctca
     2401 accttcgtgt gcacatcaag cacatcacca aatgttgatg ggttgtgata cttggcatgc
     2461 aacttaagca tcggtgccgc aacgcagcca agcaaagcct gcatgtcacg ccaacgcggc
     2521 aggccgcact gaacgaagta gtggtgcgtg cctgatttac accaagcagc gaacgacata
     2581 agtgccgaac ctaaaaccac ttctgcaaca cagactgcag catcaacaat aaccctcggg
     2641 gccttcccac tgcgcccgcg aataacggtc accatgcgcc caaccgactg gcaagatctg
     2701 atcgattgcc tttagttccg gtgggctaag ttcacgattg gctccctcaa ccagctgatt
     2761 aaagtgagcc actgatcggg tacccggaat cggaatcaca tgctcgcctc gcgataaaag
     2821 ccaggcaatc gctaacccag cactcgaaat accgaaatca ctggctagct gcctgaacgc
     2881 atcggtagct ttgatgttgg cactgtaatt aggttccatg aaacgcgggt ttttaacaag
     2941 aaagggtagg ttttgtgcag cctcaaaact caacggcgtg tcagttaaga gcgaccgccc
     3001 aacgggcgag aaagccacca acgccaaacc gagttcagcg catgtctgtg tcaagccaag
     3061 ctcaggtgcg cgtgttgaca acgagtactc tgactgcacg gcagccaccg gatgcaccgc
     3121 atgtgcacgt cttaacgaag ctggcgcaat ttcagagaaa ccaatcgcct tgaccttgcc
     3181 ggctttcaca aaaccggcaa gggtctcggt gacttcttca atcgctatcg atggatcacg
     3241 ccgatggatg taatacagat cgactgcctc gacaccgaga cgcgtgaggc ttttgttgag
     3301 ctctgattcg agatgctcag ccgaattctc aaaggtgttg ccagtaccat cggctttgcg
     3361 ggtgatgccg cctttggtcg cgatcttaaa aaagtctttg gcagctggat tggctttcag
     3421 gtagttacca atcaccgtct cagatgcgcc ctgaccatac acattagacg tgtccaagag
     3481 gttcaagcca acttccatgg ctcggtccaa aatggcatga ctttcttgct cactggtcgg
     3541 accgtagaag ttagtaaacg acatggcccc aaaacccacg ggatacacgg cgatcccgtc
     3601 ttgccctagc ttgcgatgtt gcatgtttgt cccctagtga ttggtattcg ccgaaccgtc
     3661 gctaaaccat gatgacgcat tgcattgtgg caggctgttt cttcagtatt cctatcgtag
     3721 cgcttgcgcc aacggtattc acacaagatg gatcgctcgt gttcgacgat catgttcgga
     3781 tggctaggat acctaaccca cacatccatc tctatgctta tgtgcaaatc gacaaactgt
     3841 gcttggcgtc aaatactttg acaaactagt cgatacaagt cgtgcgcacc tccagaaaat
     3901 actggcactt ggcggcctag gtgaacagag accagttaac aagcagatgc gaaatataaa
     3961 taccgttgtg gtgactcacg ccaacgtatt ggtaaatatt tgccatattg attatctcta
     4021 ccttttcgaa tagttatccg ctcacagatt cgtgatacag gtacggtcga cgggcagatt
     4081 gaactcgtct gggaactatt tattcaccaa atcttctaaa aagtgctttg acattgcaca
     4141 aaactaccgt ttttgtgtgg tatttttatt tttccttatg tgttagacgc gcgtgcccgc
     4201 gcttgcatgt ctcattctta catcaagcag ggttagtagt gggtgcggtg ttcacttctt
     4261 aattggagag ccaacatgtc aaacgatggg tcagtcgccc caaaagaacg ggtcaatatt
     4321 acctacaagc cagcaacggg cgatgcgcaa gaagaagtag aacttccgct gaaacttctt
     4381 gttgtaggcg atttcactga acaacaagac gatcgcccta ttgaagatcg aaagccaatt
     4441 agtgttgaca aggacaacta cgatcaagtt cttaaggctc aaaatctatc actagatctc
     4501 tcagtgccga acaaacttga acccgagtca gatgacaacc tagccgtcaa ccttaagttc
     4561 gagtctttgc gcgacttcga acccgatgca cttgtcgaaa aagtgcccga actgaaagaa
     4621 atcatcgaac tacgtaacgc actgaaagca ctcaaggggc ccttgggcaa tgtccccgac
     4681 ttccgcaaga aacttcaagc cttggtacag gacgaaaata cccgcgccaa actgctcgcc
     4741 gaactcggca tagaacaaaa gtaatttacg gagtaagcca atatgagcga agaagctaaa
     4801 aaagaagacg ctgccccagc tggcgatcaa agcggctcac taattgacga tttacttgcg
     4861 actagcaagg tacgtcccgg taatgaatcg tatgacatta cccgtcaagg tattcaaacg
     4921 tttgtctcct ccttacttga gcctggcaaa gtaaccgacc gtatcactgc ctcacttgct
     4981 gatgagatga tcgccgagtt ggacaagaag ctatgtcgcc aagtagacga aattttgcat
     5041 cacccggatt tccaacgttt agagtcgggt tggaggtctt taaagttttt gattgatcgc
     5101 acaaatttcc gcgagaacat caaaatagaa gtcatgaatg ccagcaaaga agatctattg
     5161 agcgacttcg aggatgcccc tgaagtcact cagtcgggtc tgtataaaaa ctgctacaca
     5221 gcggagtatg gtcagtttgg tgggcaaccc tatggcgcga tcattgccaa ctatgagttt
     5281 ggtcctggtt cgtctgacat taagctgctg caaagttgtg catcagtcgc cgccatgtcg
     5341 catgcaccct ttattgccgc ggctggtgcg gagtttttcg gtgttgatga tttcaccaag
     5401 ttacccgacc tcaaggactt gtcatccatt tttgaaagcc cggtctacac caagtggcag
     5461 gggttccgcg caagcgagga tgcacgcaac gttggcttgg ttctacctca tttcttgctc
     5521 cgcacgccgt atggtcagga caccacgcct gccaagacct ttaactacga agaaacagtc
     5581 aacgaagctc atgacaaatt tctttgggga aatgccgcgt ttacctttgc gagtcgcttg
     5641 acggagagct ttgctgacta ccgttggtgt gccaatatca ttggtcctag aggtggtggt
     5701 gctgtcaacg acttacccat ctataactac gaagccatgg gtgaaatcca gaccaaaata
     5761 ccgactgaaa tgttgatttc tgaacggcgc gaattcgagc tcgctgaaca gggcttcatc
     5821 tcattagcca tgcgcaaaaa cagtgacaac gcagcctttt tctcggccaa ctcgtgccag
     5881 aagcccaagt tctttggaaa caccaaagaa ggtaaggaag cggaaaccaa ctataaactt
     5941 ggaacacaac tgccttacat ttttgtggtc agccggctcg cacactacat caaagtgttg
     6001 caaagagaga atattggcac ttggaaagag cgcgcagatc ttgaaggtga attaaacaac
     6061 tgggtacgtc agtacgtcgc tgacatggac gcacctggtc ccgaagtgcg tagccgccgt
     6121 ccgctgcgtt cagcccaaat tacggtcagt gatgtcgagg gagaccctgg ttggtataag
     6181 gtctcgatgc tggtacgccc ccacttcaag tacatgggtg catccttcac actctcgctt
     6241 gttggcaaat tagacaagag ctagtctttg atcccgcaaa acacaatagg agtttactgc
     6301 catgccaatg cctggatatt tgagcgtcaa cggccagacc caaggaaaca tcgagggaag
     6361 ctgcaacatc aaacaacacg agggcaagat cctcgttcaa ggtgttgatc acaccatcga
     6421 aatacccaaa tcgattcaaa cgggtctgcc caccggtaag cgcatccacg gtccgcttcg
     6481 catcaccaag gaaattgata aatcctcgcc aaaattattt caggcactta cgtccggcga
     6541 gcgcattacc gatgcaaagc ttgagtacta ccttatctcc aaagatggta aggaagaact
     6601 ctactacaca gttgaaatta aaaatgcaat cgtgacgtcg atgcataaat acgtgccttg
     6661 ctgcctagac ccacaaaaca agacgatggg acacatggaa gacgtgtcgt ttacgtacga
     6721 gacaatcatc gagacgtaca caccggacgg catcgaggcg caagactcgt ggactgaccc
     6781 caaacagtaa tgggtcatag caaacatggc caaactaagg ctagatgagc gtttgctata
     6841 taccactgcc ccgcggctga ccgcggggca gtctcatgat agcttggtca gaaagtctgt
     6901 tatggaccac ctcacacgac ttttgaacac cagaagagga tctgtgccga ttgatccaga
     6961 tattggctta tccgacatga gcaatattgc aggttcgttc gcgcaaggaa ccacacaaac
     7021 catctgtgaa gaagtagtgc aacaaatcag ccgatacgaa ccaaggctga aggatccaaa
     7081 agtggccact agtaagctag agcaagaacg ggaggtcata acgctgcgtt ttgagataac
     7141 gggatctctt gtcgatagca gcgcacggac cggaccagat acattgagca tcattatgcg
     7201 cattaattcg catggattta taaaactcac ggcgagctaa taaagttgag ctactagccg
     7261 cccttatcat cttcatttgg ggactcttat gcaaattgtt gaatttaagg ggttagtaga
     7321 tcggctcaac ccgctatgcc gggatgcgct agaaaacgct gctggcgctt gcgtggcacg
     7381 caaccaatac gagatttctg ttgaacattt tttaaccaaa ctcatcgatg atccacgcgg
     7441 tgatgtgcaa ctcgttctca agcagctcga aatggatccg tcgcggttat tgcgtgccct
     7501 ggagcaatcc atcgagagca tgcaaaccgg aaatacggga cgccctcagt tctctgcact
     7561 actacccgaa ttgtttgcag acgcctggct tgtggcctca gtagaactgt tcgaatcgtc
     7621 cattcgatca gccgctttgc tagcagcatt tgttgagcgt tcctcgttct atgctcaaaa
     7681 tacctatgct gctttgctaa aagacttaaa taagactcgc gtcatggatg ctcttgcaat
     7741 agtcgcaagt aattctttgg aaaatgtaac tgctactgcg tcgatgtcgt cggccacctc
     7801 tgccaacggt ggtggactag cctcagggca gtccgccatc gcgcgttttt gcgaagattt
     7861 caccgccaaa gcccgcgaga acaaggtcga cccggttttc gggcgtgatg ccgaaatcag
     7921 gcaaatggtg gacatattag cgcgtcgccg caaaaacaac ccaatatgtg taggtgaccc
     7981 cggtgtcggc aaaactgcgg tcgttgaggg gcttgccgta cgcgttgttg aaaacgacgt
     8041 acccgaagtc ttgcaaggcg tgactattct tgggcttgac atgggtgcgt tagaagccgg
     8101 tgctggtgtc aaaggagagt tcgagaagcg gttgcgcggc gtaattgacg agatcaaggc
     8161 ttcaccgaac ccgatcttgc tattcatcga cgaggcgcac accctgatag gagccggcgg
     8221 cgctgctgga aataatgatg cggctaatct gctaaaaccg gccttggctc ggggcgagct
     8281 acgtacaatt gcggctacca cctggagcga gtacaaacgg tattttgaaa aagatcccgc
     8341 tctcgcacgc cgatttgagc ttgtcaaact cgatgagccg agcgtagaaa tggcggtgca
     8401 gatcttacgt ggcctaaaag aacgctacga acaagtgcac cgagtcatca tccgagatga
     8461 tgcgctacga gcagctgctg aactttctga ccgttacatc accggccgtc aactgccgga
     8521 caaagcgatc gatttgctgg acactgcatg tgcacgcatc aaggtcaact tatcctctaa
     8581 gcccgacttt atcgaagatc tagaacggca gctgcaaatg ctcgctcgtg aaaaacaagg
     8641 cttaactcgg gatagagata atcgtattga agttgacgaa caacgtttaa tctctatcga
     8701 tgaagaaaca aagtcacttc aggatcggtt agcgcaacga cagcaagatt ttgatgcgca
     8761 gttgactgct gcacgcgagg tattgaagca gcggacacag ctctcgcaag cgcgcgagac
     8821 agagcagaat gaagacatta gtgctgctga acgagcgctc gatgtagcag aaacgcactt
     8881 ttcgcaactt caagcaatcg agaaactagt gtttgtcgac gtgtcacctg acaccattgc
     8941 taaggtagtc tccgatagaa caggtgtacc gctgggaaaa atgatgcgcg atcaggcatc
     9001 tgctgcgcta gccatgcaaa gcacgttaat tcaacacatc aaggggcagg accacgcgat
     9061 gcatcaaatc gccgaagttc tgaaatcctc gcgctcagga ctgcgtgatc ccgaccaacc
     9121 tttgggcatt tttcttttag tgggtccatc aggcacggga aagacagaga cggcgttaag
     9181 cgtagccgac attatgtttg gtggcgagca atcgctcatc tctgtcaaca tgagcgaatt
     9241 ccaggaaaaa cataccgtca gtcgattggt cggctcacca ccgggatacg tgggctacgg
     9301 cgaaggtggt gtcttgaccg aagctgttcg acaacggcct tactcagtgg tactactaga
     9361 tgaagttgaa aaggcgcacc tcgatgtggt caatcttttc tatcaagtgt ttgacaaagg
     9421 cgtgctgtcc gatggtgaag gtcgagaaat taactttcgc aacacggtcg tgttcctcac
     9481 ctctaacctc gggcttgacg tcattacaga actctgcagc ggcgacgaga tgccgagtgc
     9541 ggaaaccatt accgctgcca tacgacccat tttatcgaac cacttcaaac cggcactgct
     9601 tgcacgcatg accatcgttc catacctaac actacctcag gctgtgttgc gtgagattgt
     9661 tgatatcaag cttaagaaag ttagcgatcg tatgttgagc accaacaaga tcaccctaga
     9721 tgtctcggcg caggctgccg acgccatcgc tgcgcgctgt acagaggttg aaacaggtgc
     9781 ccgaaatatt gattttattc ttcggggcac catactgccg ctgctttcgg atagactttt
     9841 ggctagcatg agccaatctg attctgtaac tactgccaaa cttgggctcg acgatgatgg
     9901 acacttcact gttgaatttg cctaggagca tctgatgtcc gatcgttgcg tatggatgat
     9961 agtggtgggc aatacagaca cagcagcccg ctcgacagcg gccacgcttg caccctatgg
    10021 tgttgtaatc cagggtcaag ccttgaacgt tgaccaagcc aatggttggc tggtctgtgc
    10081 ccagagtgct gctcaagcga gtgcgcgctt tgttgtcgtc gtgagctcct ctgaggatta
    10141 caagcgaccc gaggttagac ggcagctgtc actgtttcgc ttattcttgc aaacgttcac
    10201 gaaatccaca atcaacggaa tggtgaattt ggtggactcc gggcaggcag acgctcgatc
    10261 ggtcgacctg cccggaacgc ccatcttggc tgactgggaa accattacaa ctgatagttg
    10321 ggctgcccga gcagtggctc ggttgcactc accgaagcga ccaagctggc cggtggcttt
    10381 gggcctattt ggacaggaaa aaataggcac ctggcttgaa gtgcaaccca tgccgggaca
    10441 aagcgcaccc ggctgcttgc ttggcgtcag cggcaatgag gcgaaaatca gctttcatgc
    10501 tgctgggcca gctggctgtt tgcctgatcg atcgatcaat gaatacgaat taaagggtct
    10561 tacattttcc tgtgcgggtc atgatttcca tgcatggggc ctacaaaatg ccctaccccc
    10621 tgagcaagct tactttgccc ggttggagaa cgaaccagac ttgctggccg tcagtacatt
    10681 acccaacggt gaactcagtg aagtccacct catgtgcttg cgctgaattg tccaaacggt
    10741 tactaagatg acgcctgatg ttcaaaagct gctgcaacct ttgccacctg atgcacccgg
    10801 aggtcaagat ccgcgcgaca ccgatacgta tgcacagatg agcttggaaa tcgacaagct
    10861 cgcgagtcta actgcagaga ctttgccaaa ttggtctcgt atcgaacagc tcgcttcaga
    10921 ttatttagaa aaacagtcca aggactacct agtcgcctct tggctgtcag aggcttggac
    10981 gcgacgctat gaactcagtg gtgtagccgc cggtctgaca ttaatagcgg gaatcacagc
    11041 acattattgg gatacggcca ttcctccagt taaacgactc aggggccgtc gcaatgccat
    11101 ttcctggtgg actgatcgtg ttaaccagct actggaaaaa caaactgatg acaccatcac
    11161 agctgagcta agtgaatcgt tagtcaaggc agctaaagac cttgatgaac ttctagccat
    11221 taaggatcca gacgctaact caatgctgac cttgatcggc catttagaac gcattccagt
    11281 tgaacaaccc cctgcagttg agcaagtgcc ttcgactgat gcaacagcgc acaatgcgcc
    11341 gcctgagccg tccacaggcg cattaactga tcccacctcg acggcgcaag caacgccaaa
    11401 ccagccgcct gagacaactg ctggcactgc acctgcatta ccccaagtgc ctgagggcaa
    11461 actcgagatc aaaagcctga gcgatttgac ttctctcttg cggccagtcc aagattacat
    11521 cgctcgcgtt gggccagcat tatttgactt tgatcatgca aatccactgt cgattcagtt
    11581 cacccgcttt gcggctcgtg ctcacatcag cgaaatgcca ccagcagaaa atgggcaaac
    11641 cgccatttca ccgccagcgg ttgccatcag tgatgcgttt gagagaattt cgaactccaa
    11701 gaatgcagaa ggccaaatag agttttgtga atcacgcatc cgtgaatatc cgttttggtt
    11761 ggatctggac tatcactcgg ctaaaggcta tcgatccctt ggtccatcgg gcgcaaaaat
    11821 gcgcgacacc attatcgact tattgctcaa ttttctgcgg cgtatgcctg gaattgaaca
    11881 ctatagtttt tccgatggca caccatttgc gcgcactgaa acaatcgcct ggatcgagcg
    11941 ctgccggcaa gaacgctcgg gacaaggacc cgttgatgcg tttgggctga caagacaaga
    12001 agcaaactcg ctgttgtctg acggtaaaac acaagaagcg ctaggcgttt tgcagacctt
    12061 tatctccaac acgcgtagcc aacgagatca gtttcgggca cgcctggcac ttgtcgagct
    12121 taatctcgaa caggcagatc aggctaatgc cctctctcta gtccaacctt taacggatga
    12181 ttgcttaagg cttaaccttg accagtggga gccagaactc gccaatcaag cgtggcaatt
    12241 aagcgcccgc attgctcagc aactgctaaa aagcgatgat ccatctatcc ctcttgccgt
    12301 acgtgacaga tatcaaaaag cattcgatga agccattgtg catctagcgt cgcttgactt
    12361 cgaatctgcc gcacagttca ccaaagccgc gacataaact gtgcaaggtg agttttcata
    12421 ggcagcccgg cgtcaaccca agtcgatttt ctttgcttga accttcacca catgttgcgc
    12481 gctcactttg gtgatgtcag cgctcattga gatctgatag agcgctgttt gatcgatatt
    12541 gctggcctgc gttcgatcaa gcccctcaat cagccgaaaa ctgtcacgca atcgcgaaac
    12601 aaaccgacca accttgtgcg tggcctcatt ggccacaaga gacactgaat ctgcctgttc
    12661 agtcacatgc ctgtaggtgc cattaaggcg gtctatcttg aaatctcctt gctcggacga
    12721 gataccgaat gattgagcgt tgatttgcaa atggttcaca ctagtaacca aaacaaccga
    12781 atcagacaac ttaaacgatc gctcatgtga ttggtccgca cgtgcaagta ctgcgatgac
    12841 gtaagctggc tgatccgagc catcaaaatg caccaacacc tgatcaccgc aggtaggctc
    12901 caacaagcag ctagccgctc gaatagcctc ataaatcttc gtgtcatccg gttgctgtac
    12961 gtacacatac cggtccgaca cggacagcac atcaaagcgg cttaaccccg ctgaaacggt
    13021 cggctgcatt ggcacctcgg tagagcgtat gcgcttgacg ttgtgcatcg tattttcctt
    13081 tgtattcagc aactcgattt caactagcca tcacaagcgg ttgactcggt actatgaccg
    13141 tgccgaatgc gtttccgttg ttgcctttga taggatcacc gaggcgaacg gctggctgac
    13201 ctccgatcgt caccaccatg ctacccatga caaactccac cggaccaatg aaggtgcccg
    13261 acgacacgcc accattgacg ccgggctcat cgcccatgga gattggcacc atagatgcct
    13321 tattcaaagc aggcgcacca cagataagta cagtaggcac tggcggcact gccatcatca
    13381 attctcccgt gtttgggtag ggaatgggta ggggcggcgc aggcggtgcc ggtgtgaggc
    13441 agacatctgg catggccatt gtcatgccgt cgtccattgt gcaaacaaac atcaatcact
    13501 ccaaattagc ttagttcgac ggaggctgcc atttttcagc ggcgagtcgt tctggatctg
    13561 ttccctttac atccgacaat atcgctttgt cccacacagt ctggtgctgt gaagcgtcat
    13621 gcaaattcac cttttgtaac gttgcttggc tgaaatcagc accatcgagt ttcgctttag
    13681 acaactcaca actactcaac gcggcagcac gccagacgct acccgatagg tcggcaccgg
    13741 tgagtacaac cttggtcaat gatgcgcctt caaacaccgc atccttggcc gataccccag
    13801 gcagtacaca ggcgtttagt tgtgcacccg taaagtcgga ctggtccacg agggcctgct
    13861 caaacgacac ttgcttaagg ttcgcactct ggaacttagc actagtcaga tccgcatgcg
    13921 aaaagaatac ggattgcagc tcacgcttag ctaaatcaac gcgctgaaga atggctttat
    13981 aaaagatcgc accctttaac tcgcagtctt caaaggcatg cccactgagg tttgagcctt
    14041 cgaagtaggc ctcacctagt tggctgcctt taaaggtgca ggtttgcaaa tccaagcccg
    14101 tcattgtggc tcgacgtaaa tccgctcccg agaagtcaca acgatcaatt tgagtcttta
    14161 acaaggcggc tttaatcaga ttagccccgt taaaagacac cgataccaga gacgactgat
    14221 caaatgccag ctcctgcagg ttcgcccgcc caaagtcgac tttctccaac tcagacttgg
    14281 caataatcgc acccgctaac accacctccg ttgcatccgt ttcgccaaac gtgcaggcct
    14341 gaaacaccac attagacagg tctgcggctg tcaacttcgt ctgtgtaaaa tcgcacgaca
    14401 caaaaatcga tttatttaag ctcgccttgg acatgtcggt ggctttaaac gaacagccgc
    14461 taaagcggca ttcggtcaaa tccatccctg ccaagctcag tccgtcgaat tgcccgtttt
    14521 gcgatgaccg ggttgtggat aaatggtcaa tcaagtcact caaaatcttt ctcccgtcta
    14581 cgcactagac tggccgcgcc acaccagaca ggtttttaaa atgacattgc cctcaaacgc
    14641 agtctgatca tcgaatttgc tttcggtaaa gtcagcaccg tacatattgt tgcccatcat
    14701 ggacgaagat tttatgtctg tcccatggaa actcgcctgc atgaggttat tttgcaccaa
    14761 atcaacggcc tgcatcgtgc agctaaaaaa agacaatgaa aaagcttgag agcgcgagaa
    14821 acgggttttt tgtagttgac cagaactcag gtctagcttg tctaaagtgc aggctgaaaa
    14881 gaggctatta ataatggttg ccgtgctcca gttgctacca ctaaggtctg tgttttcaaa
    14941 acgacagcca tcaaacaagg gcttgagcat agccacgctt gctctcagaa ccgaacccgt
    15001 gaactgacag tcctttagcg ctgcaccact aaattcgagc cgatcactgg tcacctcatt
    15061 aaacttgcta ttcgatattc gcgccttgat gaagtctact cgcccaagtt cagcacctgt
    15121 aaagtcacac tgatcgatta gggattcatt gaaagctgac tcagtcgcaa ccacacgtac
    15181 aaagctcgct ccagtcaagt ctgactgact cagcttagct tttttgagaa ttgccccatc
    15241 aaaacaagcc cctttaaacg agcaatcggt caaatcagca ttcgtcaggt tggactgcgt
    15301 tagcacagcc tcatcaaacg ttgcttgctg acaaacggaa ccgctgaaat cactggcgtt
    15361 gatctttgag tgcgtaaaat ccgcccgcgt caagatcgcc tcactaaacg ttgccccagc
    15421 taggttacac cctcgaaact gagtgccctc acaaatagca tgactaaaat cttgtcctgc
    15481 gagatcaagc ccaaccaggt aaagtccgga taagttcatg cctcgaaact gggtgggctt
    15541 actagcctgt tcctgcataa aaccgcgaat ctgggccaac gtttcagcat cgggtgcatt
    15601 gtctggcacc tcgccggcag attcactcgc aacctgaccc cctgtctgaa cttcagatga
    15661 gcccgttggt ttcgatcgcc gcaggttatc gaccaatgta tcaacaaacc ccgtcaacct
    15721 ctcgagctcc accgataggc tgaatgaccc agcatttaca ccaagcactt gtttaatctg
    15781 tggcacctca gacagagcct gcaggtaagt ctgctctgtc agaccgctgt cctttatcgc
    15841 agcctcataa gcggctcggc catctcgcaa ttgccgcctt aactcaattg ccagtgcctc
    15901 aacaggatct ttggcctcgc gaatggcttg cgctgtttct gcggaaatgc ccggctgtga
    15961 caacacatat tcaaattccg gccaaagttt aacgttacct gaccgcgtca ctcgcttagg
    16021 tgcggctgct gaagcagcag cagcgatggc cgctgttgat gccgcaagat tcccatcaga
    16081 cgttgtggca ggcggttcag tcggctgcag ccaacgggca cggtagagtt gcatcataat
    16141 gtcgctcggg ggcgtgttaa gagaggcggg ttcaagttgg aacaggacct ccgccaaatc
    16201 aagtgcatca gcacgatcaa cctggaccag tcctcggtgc agaagtaccc caacaccctc
    16261 gttaggaaac aggtacagtg tttccggttg catggtcgtg tgagcccatc cttcaaacaa
    16321 gtcatttgtc gaatgcgtac gcttaaaaac acagcgtact cgcttgccgg gcaagttaaa
    16381 tagtaaacgt gtttgcgtcg ggtgcatccc aacgatttca cccacttcgt cacccaccag
    16441 cgaacccggc agttgctgcg cagggtgtgc catctggaag aacgccatgt tggtatcagg
    16501 ggcaaaattt ggccagtctt tctctagcca ctgacgatca aacgtaccaa gatgttggct
    16561 gcgctgctca ctggtgaccg gcaacggcca aaaccctgcc ggctccgccc gagatgttgg
    16621 tgaggtgatg gggtcattgg ggtcttccac gctaggtgct gcttggcccg atttagccaa
    16681 gtaccctacg ccatccgggt tggttgcatg gctggctccg ccaaacgcgt tttgcagtga
    16741 aatcggcacg gggttgcgtg ggggtgtgac ctcttgcaca ctccccagca atccgaagat
    16801 acgctgaccg taaatggcca agtcacgctt ggcctggcca acacgcaccg acgctataaa
    16861 gggtccttga ctcagatcgg ctggtggata tgccacccca aaacaaaaaa actcaccgcc
    16921 tgctttagga aagccctcat cgagcgcccg ggcgggccag tgttgcttgg caagcttcca
    16981 caacacgcgc gaatcttcta cctgtgaagc ctccgagcca agcgtgaaca catgccacac
    17041 agcaagcgaa acctcgaact gaccggatag tcttcgcaaa atatgtgtgg tgacttcaca
    17101 accggcaggt tggctgatac gcatggacta aaactttcca atatagaaat gcgtgttcga
    17161 ccccggagac cacatgtgca caccctcttg acctcgggtg tcgttggtga caaggtaatt
    17221 gccagagtca gtttgaaacc cgccgagatg tgaattattc gcgttcagaa cattcgggtt
    17281 ctcagagttg ggaactgctc ctagaataat gggctgatcg gggtcaccac ccataaaccc
    17341 gataacaacc tcggtgccct tcagtagcgg gaaagccatg ccatgacctt gcccagaata
    17401 aacagacgcc atccgaaccc aagacgaacc gcgattggga ttcttgtcgg tcaggtcaaa
    17461 caaaaactga accttgtatt gaccataatc gtttagctgt gcgtacttgc cttcgctttc
    17521 atcgtcaaca atgccgctca gggtacccga gataaaaggc cacggggttt tacgtggcga
    17581 ccgatactgc aattgatgat caacaccctt aaatttgcac cgatagtatg tgccgacctg
    17641 tgagccgcgc tccccaagta actggctgcc ttcgaaccag gcataggctt ggcggccagc
    17701 gtgcgtggcc cgaaccacca ggtagtctct gttcaaagcc gactgatagt gctgctgcag
    17761 agccacaccg gctgcactgt atacatcaat agccgtggtc tcagcatcga tactaaactg
    17821 atgacaaagc aactcctgtt tgcgcagcat cgccatgcgt tcagtttctt tcacctcacg
    17881 caggttgtaa ccccaaaaca tggtagtacc atagccacgc ggattgacct gaacatccga
    17941 ctttaatgtg tcttcaagcg ctgccttgcg ataattaaag tcctgcacta ccaccttacc
    18001 ggttgtgact tgctcacgca ttgttaagtt cgtaacccgg ttatcctgca tgtcggtcgg
    18061 catattctcg gtgtcgaagt agtagagtgc cttcatcgag ttagtttgtg cctgacggta
    18121 atccaccata atcaatctct cattgaactc ttcggattga tcaaagaaat agtagatacc
    18181 ctcggcttcc atatagcgcg aaatgaaagc taggtccgtc tcatagaact ggcacaccaa
    18241 cgagcgtttg cgaaagacac tcgagtcctt gagccgctgt tcaaagttca gatcagttaa
    18301 accagcctca cgtaatttct gggcaatgag ctcggggacc gtcttctctt cacagtagac
    18361 atctgtgatg cggtttaatg acatcttcca gatccgtgga cgcaatacca cttcgtaaag
    18421 aacatagtta ttgacacggc gaagtagcgc gaactcgaaa acaagccccg agtagttcat
    18481 gcacgactcg ccatcggtcg taaaaatctt caatagcgcc ggttgcaata aaaagtcgtc
    18541 cgcctgtaat tcaaaatcgg agcaaccaaa aacaatctta aagacatagg gctcagagat
    18601 cgcttcatcg ccctgtatct cagtgacatg aaatactgca tccggtttgg cctgaagctt
    18661 aaactcaaac ctcggctgtt gtgcctgctc tgaagtggcc atcactaagt cctcttgtcg
    18721 cgctttatta tttagctacc caatacgaac cagggcgcca gtaatagaaa ccgtggcatc
    18781 gccggtgatg ctcacttcag gggctgccat ctcgacactg gcttccgcgc taaccgtgac
    18841 cgcagctgaa gtgacactca cctcagccgc gcccaattgc accatcgatg tttcgcctga
    18901 cttcaagagc aacagctctg gtgtggcttt tacgctagag ccaacgcctg gggcctcttg
    18961 ggccacgagg ctcgccattt ggctactgcc ctccaattga agctgagcgc ccggcccctc
    19021 agcacttaat tcagtcgcca cgagtttgat atcctgaaac gtggcatcca tacttgaatc
    19081 tggcaacggc gtcaaaggtg tggtgttgcc tgttaaattc accatccgag ctgcaataga
    19141 gacttcctgc tcggtcatat tgagataggt ttcttcaggt gctgggagat cgtcaacctg
    19201 gcccaggtac tcaatgtgct tttcatttaa atccgcatct agagctaacc ctggtatgtt
    19261 cgaaaaaccg taaataggca gaccacctct gctgacccgc aagacacttc cctgcccatt
    19321 ttgtttaaag ctagagtaga tttcttcagg aatactttgc tgatagccga tgaaaatacc
    19381 attgtgagat gacgcttgaa tagtcgcgtt cggctgccaa gtctcgggct tcgtcaagcc
    19441 acgctgacta tcgagatatt caactatcaa tatagatacc agagcagtca cgccggagat
    19501 cgcaactagc gtcccagtaa tcgacgcaat gcctgcagga gaagcagacg tttgactctt
    19561 aaatcctgag ccaaaccctg aaatagccaa agtgccggcg gcggcaacga tgtcaactgc
    19621 aatcattaca ctaataggaa tgacctgagc ttgtctttgc gcttgaaatg cagcgcgctg
    19681 gatcggaccg agaccggccg atgcctgaaa cagatcaaga cagcgagatc cgccgtattc
    19741 ttggatttca atcttgcttt tggcaaaact tacgtcagac gcagctttgt aagcatagct
    19801 tttgccgaac gtcaaaccga catcgtacgt caatttgaag gcatttgacg tgccggccgc
    19861 aaacgaatta gcaactccta gcatcacttc atttttagcg ccaagggttg acttgtaatc
    19921 accaccgagc atggtggtga acttagcacc ggcagaccat tggaaaatgc cacctttccc
    19981 gagagtagga ttgtaggggc ccgagtcaga catgtgtgtt cctcatcata ttctcaatca
    20041 gcgcgctata acaaaacgct ttgcgaatgg gcgtcagttt gtggtcgctg catctcctgg
    20101 ctgattctgc caaatcggca ccagtaactt ttgcccaacc aaaatcttgt cactcgacaa
    20161 atcgttcaat gccttcagta tttgtaaatc gacacggtat tgcttagcaa tagagaacag
    20221 tgtctgacca ctttgcacca caatctcctt ggtgggtgct ggtttgagtg gttcaattgg
    20281 tggcagcggc ggctcagggg gcttgggcgg gggatttgct tttttctcgg cttctttttc
    20341 aattaggcgc ggtacttgta acgcctcagt tgccgcagac ggtgcgctcc aacaacgtcc
    20401 agcgcgctct ggcacatcga tcgtgagacg tgagacggct ggctctgtgg atggcgttgt
    20461 ttgctgcatg acgaagtcat agtccttagc caaatctaga acttcttgtc gcccgctcat
    20521 ttcataacgc actgcgattt cttttacatt cagatcatca agttgcttca ttgcagcagg
    20581 gaaatccgct ggtgtaaaca cccttgctcc atctgcgaac tcttcgacaa aggttgcaag
    20641 acccgtcggc ccaggatagc gtttgactag ggtcatgttg tcaagctcga tttcaagacg
    20701 cgtctcacca catttaccgg gtgaccactc aaaactatca cttgcctgca tgttgacatt
    20761 acttagctcg atctgttgct ggtcacactg cacaaacaat aaagcagcgt aagggcgcgc
    20821 tttggcgcca ggattcacgc ctagtggcat cgcagctagc gtgagtttgg cactcttttg
    20881 tattgatgct ttcgagagct tttgtctaac gacttcactg acccgactcg agaccgcttg
    20941 attcagaaac tgaataaagc ccgcagcaaa cgggaattgc gccccgtctt tcgtagccgg
    21001 tacgaatgcg ccccctaggc ggttgacaaa actctttgct ggtccatcga caaaagacca
    21061 gacgcttccc tgatcgccaa acagttgctc gctaacctcc tcagggttga tggccagatg
    21121 ggtcttccac attacgtcac gcgcccaggt gtcttgtata ttgcaggagg cttgctggaa
    21181 tgcatagtaa ttaattgtgt tcataggcgc ctcaatcacc tgccaaatca cctcatcctg
    21241 cgcagtgttg aagcgggagt ttttacgaaa tgcagccatt tgtttgctca tatcgagcaa
    21301 gaccgggttg ccaccatcag cgctctgctg tgcttgagcc gcgccgaaat agctgctagt
    21361 catcttcatg gcggcaccac ttcccccgag cacgtccacg acagccttat cacgtgcctg
    21421 caagtaactc tcaaatagac taatgtcagt gcgagcccgc gtaatggcag acggtactaa
    21481 gttctggccc tgttcaactg aagcgcgcat ggcttgaccc gccacgttat tgaccgcgga
    21541 aatggtgttc atagaattca caaacgagct tccttgagtg cgcttggcct gaacaatcaa
    21601 gttggtgtag tagcgtgcga actccaacca ggatggagac tgactagatg gcaaggcctg
    21661 aaactcttgc gtcaatcgat tcaaaaacaa attaaacggg ctgttctgag ttccaatgct
    21721 tgaaatcaca cgtcggtatt gaggttccgt tggcacgagc gactctccct gctcgatccc
    21781 aagtgccata tccctccacg cattcaggcg ccgttccatg taccagcgcc taaatgcatc
    21841 gacctgccgg tttagccctt ctgaaccctg caaagcctga ttcaactcac tgatgaaccc
    21901 atcgatacgc tgctgtcccg ccaaagttaa tccagcttta atttggtagc ctgttgcaga
    21961 cgaaccgtcc ggattccaaa agtccgccat ggagatcgga gatagatccg gtaacgtatt
    22021 cgcccaatca accaaccact gcatctggtt ggtctttgac aattgcgcca gcagggtggc
    22081 gcggtcaagg cgcaagactt cagtcaagta agggtcgtct ggttcagacc aacccacagc
    22141 ggctgcgagc agttcattaa aaccagacaa aacattgccg tctatgctag gcgctaccgt
    22201 ttgcaaaacg gccttgggca cttgaggcat agcaagcaag tcactgtagg aggcaccatt
    22261 aactcgtgct tggacaatat tgacatagcg agctagcgcc agcattccgt aagcttgttg
    22321 tgctggctca gatgcctcaa gcaacgtttt gacgtccaat ggaccactgc cctcggtatc
    22381 ttgcaagcgc ctgaactgtc tgacgtaggt gtcctttagc ttgtcctcta gtcttgtgac
    22441 ttccggactg aaagctaacc agcgggttcg ccaatcctgc tccgcctgca aaatcaactt
    22501 cacgaacacc aagccggtgg tcaagcgatc aatatctggc ttccgctcgt tagtgggttc
    22561 ggaggaaaac tcgctaggta tgatggaggc aagccggtta atagtggcag acgttgattg
    22621 atatgacacc accaaaaaca ccaaggccgc taggcaaaga gatagccacg agacgagtgc
    22681 caaattagca gtcacgtgac gccatcggct cacaatctga cccggtaatg caatgcctct
    22741 ctcgatcggc aatatccgag aaaaaatatc gtgtatgaac aaccccctgc gcccttgatc
    22801 ggagccattc tctgatgcag cggcagtgat cagctcacca agacgactag gctcgggcgg
    22861 ctgttgacgc gcactcgtca ggaaaagtcc acgcaaaaat ggatgttcta gataggggtt
    22921 agcgccaaac gtcgcctgca agaaccgctg caaacccggc ttcaggcgtg cgagctcgcc
    22981 aggaaacaac agcatctcag gcgtcaagtc cgcctcacgc atggacagat cgagacgcag
    23041 actttccaga cgcgcgcgca gtgtatcgat tgcctcttga gcaaagactt gctcatccgc
    23101 gatgtcggtc cgctcgtcgc tgagataacc catggcctgc atcgactcgg catcgcttaa
    23161 gccgttagcc caacccgtga aaccgtagat ctgatcagac ttgctgatca tcacgtagat
    23221 aggaaccctt ttttcgaata accgcattac ctgatcgata cgatcacgca aagactgacc
    23281 acgtctttca atggcttgca tatcaccgct taatagcaaa ggcgcatcaa tcacaactac
    23341 caggccgtta atcccttcgc gagaacgata cttggcgaac aattccaaca ggtaatccca
    23401 ttcctgctga tcgagctcac taccgtcggg cgaaacgtaa cgccctgctg tatcaataac
    23461 cacagcttcg ctaaaaaacc accaatcaca attggccgtt tgggtaatat cggtccccgc
    23521 tagagactca cgcatcatgg gcatcaatcg cgagcgactg atagccgtag tcttgcctgc
    23581 gccgctctcg cccatcacca aataccaggg aagcacataa acaggattcc caaaccggcg
    23641 aagctgcgaa cctttcaaaa gtccaagcgc ggccttgacc tgttggttca atacatgttt
    23701 gaaatcaact ttttgtgccg atgccatcgc atcggcgcgt tgagccgcta gcagcttaga
    23761 tttggaacgt gagattaaaa agaagcgctt ggcagcctta attgcgaaat acagtcccag
    23821 tacgccgaag aaaaccgcaa atgcacccca cacaggccag tcgagataca gcaccaacat
    23881 ccagctgagt acgcccagca aagccaacag gacaataaca agcaaaaaag tcaagatctt
    23941 gctcatcagg gcagcctcgc cgtgatttct gaaacagtct gcaccaattg ataatcaaac
    24001 cacgcggcga tccccatcag gatggccagt ggaatgaaaa tgatcaaggc gagcttactc
    24061 ctcggcccaa gcctgtgacc tgttttagaa ccgcctgatg cagtgcggta cgccggcgag
    24121 aacaaaggcg attcttctgc ggtaatcggc gttgactcgc gaccacgtac cagctcgtac
    24181 tgagactgtt taaacttcaa gagagtcggc gaattgggtg tttgactgta tttgcccaca
    24241 aacccaagac ctagacaagt taaaaagact tctctgagtt catgatctgt ctcatcgatt
    24301 ttgtccattt gctcaaaaaa ctgaacaccc gctaaagtag tgtgaaatag tttgcgttgc
    24361 aacatataag gacgccaggc agcatcttcg cgccacgatg gcaatagcgc taaacgctcg
    24421 tctgtccagg ccaccacagg aaaaagtgcc tcgtgaaagc gctctagcga cacgctatcc
    24481 tttagtgcct cgtctcgcgc ctgacctatc agcaattgca gctgcgcatc aacatcagct
    24541 gggtcaggct ctgattgccg cgataacgcc tttacatagg ctaacaatgg gataaagtag
    24601 gagcacaaga ccatatcagc ccttgataat aatcatcaca acgcgagcat cttcgggtgc
    24661 ctctggccaa taaaatgcaa cggctccttc ctcttgaacc gtctgccacc cttgactaac
    24721 ctgttcaatc cggaagtaac gcgcatcact gcgacgcggt agtccttggg gtggcccggg
    24781 caactcaaat aactccacac cgggcaacgc gtagtcgatt aaatctggca cgacagtagg
    24841 cgcagacaaa cgaacagagc ccaatatctg accaacgctc aagtcatgaa tttgatcaga
    24901 ttgcaaaacc aggaagaacc gatagcgccc cgtgaaatat tccaagggaa ctgaaccaga
    24961 gtaatacgtg tcaccgggtt gcagcgtaac gctgtagtct gggcccatgg ctatttcgcc
    25021 tagcaagcga cccaccaatt cgcgggccat ggagaaacag ccgcctaagt tatggtgatc
    25081 atacggcgca aggccttgct cgttgttcga tgtgcgccca tacacatcaa accgatggga
    25141 aaaagtgctc aattcaccaa tacactgccc aagcaatcca taaacctccc aaggatgcac
    25201 cgacttggca tccaaaacgt gcgttagagc cggcacatgt cgattaagta cctgaactgc
    25261 ctgcatcatc ataaggaaat tggcatcaag atcttcagag ttaacacctc gcgggctctt
    25321 atactcttca agctgacgaa gacggcctaa catttcgtcg cgtatgtcgc gcaccatatg
    25381 ggtaaggtca tccgaagcac tcaacgcgac cacaggagca actttgttgc cggtcagttt
    25441 gacctgctca ccatctctgg ttagctgcaa caacgcaatc acgtcatgat cctctaacgc
    25501 atcaacctca ccatcaaata cgatcttggc tacatacgtt atcgttggca caagcgcttc
    25561 tgacccttga gagtacacat cgcgttgggt gctagggttc gacaaagagg cgtaacgagt
    25621 atcaacttca tacgcctgac ttaccgaatc cactacagtg acgttaggat ttgcgtctga
    25681 aaaccgtctc acagccaagt acaccgacaa cggttgatcc gggttagacc agactttgtc
    25741 aaatgatctc gccgcgactt gcatattacc ggggtactgc aagaatgact gatcaggcaa
    25801 gacagccttg atctcacgga tttcaaacat ccggttcgta atggcgctat ctgcgatgct
    25861 caggctttcg atgccccatg gataggggtt aagcatacgc acgaacgggg ttcgtgcaaa
    25921 gtgcaactgg cgttcaaggt gctggaaatg ctggggttgc aaaaataggc cttgatgcca
    25981 aaaaacttgt tgtgaaatat ccatttacaa atcatccacg aaggcctgaa actgaacatc
    26041 gttaccataa gtgaaggtac tacaaccatg tgacaaagat ggcttacaaa cgcaatcaag
    26101 gtcacgatca agaaaagtag catgaagaac caaattaaac acccctaccc gtcaatcccg
    26161 gatttagaca tgagtatagg cagaagctaa agtttcatga gtgagctggc ttctgtcgct
    26221 gtctgtctga gcacctcggg tgaaatttcg atctctaaat tgttgttatc cacaggcacc
    26281 tcttgcttta tggctgccgg tgcgtccggg tcatgtgtca gactcaccgc atcgacaatg
    26341 cgttgcggtc ctaacattaa ccgcatagcc agcgtagcgg gtgcggcgga gtaatcctta
    26401 aaaaccagac cgctagaggc taaattcaac gggatcctga aatagcgggc tgagcgttca
    26461 ggttcaaatt gataatagcc tgcaacgata cccacgtact tcgcatcctg cacacggtct
    26521 agtttcatca caatgcgcgt gtcagggcta acaacatatc gatctaagtg caaagcccct
    26581 ttgggcaaat tacctgtagc caacgaattc gcaaggtcac gtggttgggt caacagtttc
    26641 ggaaaagcct tctcgtcctc aagctgcacg acccccaaca ccattgtgtg aggacggtta
    26701 gcgtaaaagt tcaaattcac atcgctcatc agctcgatca tgatgccatt ctttgcgaac
    26761 ggccaggtga cctcagcctt ggccgtcttt tttttatcgg cagatgaccc gccggtaaca
    26821 ccacaggctg tgagagccac accggcaaga atgatgatta tcgagcgcgg tagcgtttta
    26881 aacatagtgt cattttcatc aaaaaatgtg ctcagcaacg gccaactaaa cctcagaaat
    26941 gagtcgcgga tgcacgctaa atctaaaaca tctgacgtgc cgcctgccaa tggcgaacct
    27001 tgtcacggat acagggcgat cgcaactgta cggacagctc tcgagtctaa cgagacaaat
    27061 gcgcacctat tagtgtaaga aaaaactttc acactaacgc aagttacgca caacgtgtgt
    27121 tacaaaatac tagagacgtc tcgcaccaca atacgacggt cacgggtaaa catatctatt
    27181 atgtccaagc gttgttacat actggggctt tcgctatcga ctgtgatgat atggagtgta
    27241 tacggtacaa cgagtatcgc tcaaaccaca actgctcaag tcatctctgt aacgcaagag
    27301 gtgtttgcta aagctagtcg agaaccggtt tgctggcaaa cgattttgac agcccatcag
    27361 aaagccgtcc gggaacaggc gaataccccc tggctcgtac gcaactggca gccgttgctt
    27421 ggtgctgcca tgggtggtgc cattggcttt aagttcacca ggaactttgg cgagtcgagc
    27481 gagaaatgga aatggcccac cgtggccggt ggagctgtcg ccggagcggt cgctggaccc
    27541 gggttcactg gtggggcata cggactaggc acgttagcct acagcatctg gccaacctca
    27601 ctgccgttaa cagtggcgtt tagcctcgtt ggtggcgtgg tcggcaaagt cgtctgggat
    27661 atggtgtttc ccaaaaaccc agcgcttaaa aaacccaaac ccggtgagta tcttgccgac
    27721 caagtgtttt atttggaaac cacgtgtagt aagcccgaac gcatcaccta tgaatcagcc
    27781 ccctatcttg tgaagtatcg acataacggc cagacctatt ccgcacgtgt gaagtactac
    27841 ccaggtgcca ggttaccgct ccaagccaat ggtcgcccac tatacgaaat tccaaactaa
    27901 ccccgttagc ggcttgataa agccgctagg aatcctcgtt gttcaggacg gggaggctgt
    27961 caatcaccaa tctattgcca taggggactg tgccgtctgg tagccacgtt gaacgtaacg
    28021 tgagttgcct catcatggtc acccggcaac aaccaagtat tggcgcctag cctcgaccaa
    28081 acaggtgaac ccagctgaat aggggccgcc tgacccgccg ctagcccaag ttcgatccgc
    28141 aaggccagag gctcaattag gtaatagtca accaaaaacc tgatccggtc atgctgctgc
    28201 ccgccgcgta acaacgccaa aaacagatca gagggcaatt cgagtaatcg caaggttatg
    28261 ccaccatgcg ataggcattg atggccaagg tgcgtgtcct cacccaaact tgtggcttgc
    28321 ttacccaggt aacagcgctg cctttgcggt attggcacga tcacgggcat taattgctcg
    28381 acaccaacca cagcctgcgg gaaacacgcc tgaatcacac tttgcaagcc tgctgcggtt
    28441 cgtgtaagtc tgctgaaatt ggcaccacaa cgcagcaacg ccccaatgcc cggctccatt
    28501 gtcgcctcgt cgggcgagtc tatcccgaca aaagcataaa gtatcgccag catgcgttgg
    28561 tcacgatgct caacaacacg cacgcttggt cgcgttttta gccaggtttg ataaaggatc
    28621 gggtagatcg attgcgcaaa aatatcaaga aattcacggt taacggtgaa accgtcagac
    28681 tgctcacgca gcaaatcctc ggtgtaaaac atgggaagag gggagtcaac accgtataac
    28741 cccaagaagt tggcaataac gttatacgta ccgtaatccg ttcgctctac gcttgtcagg
    28801 tccgtttttg gaaaccctag accgagtcga ggtgtcgtcc gaaccgccag atctggattt
    28861 ttgcccaagc gttgagcctg aagacgcaaa agtctaatta cttgaaaaaa agaaaatcga
    28921 tccccgcggg cgaccagttc ttctactata tcaggggctt gtcgcccaac atcggtggcc
    28981 attgaaactc tatccctgtg tcagcatccc gcatctggaa tattgtgtat gtattgatcg
    29041 tcgcatatgt agcaaagaaa cgcgataaaa cacaccccca taaatacatc gcgccaattg
    29101 aaggccagtt ggattgatca caaagcatgc aaatcgcttg tccacgaata acactgcccc
    29161 gatagagcat gctctgcggt gaaatttcaa gtttactgat accttcaatc tgccttttgt
    29221 tcactgcccg actggaatga actccagtcc tgaagttgtt gtatagactc agtaaagctt
    29281 gaacggtttt ggtgtcacca agtgacataa agttcattgc agtatggctg atacatgccc
    29341 acaagagatc ctctccggtt ggtgcatcga ctgcaccctt aactggtgtg atgttgcgaa
    29401 aagcgcaacg ttcaggcgac gtgctggtgg gctcagacac ttctccaagt ttaagttcct
    29461 cggcaagcca cctattggtg cacagcaact cgatggacaa cgtctctggc acaggctctt
    29521 cttctggctc gtagaccacg gaaagatagg tctccatcca gtcacccagc atcgatggtc
    29581 taacactggt gcggtaagtc ggctgtgcgg cacgcgcacc aaactcgagc aatgcaaagg
    29641 gcacgtactt gcgctgcatt acctggcctt gccttagtcc tataaccgat tcaattgaaa
    29701 aaacttggtg gtgctgtcgc gacatgccgg ttggtagcac cagataatcc ggcgtctcgt
    29761 gatgaagttc aacgggctca gcagattgtg caaacagatt aactgccggc accacgtgta
    29821 acatgaaact ggagcgactt aattcgggta acgcaaacga aacacgctcg aactgaaatt
    29881 gaatcgcaaa actcccagtc ggtaacatgc caattttttt atgcaaacca tcgagcgcaa
    29941 cgaacaggaa cttatccgga aatgacaaca actcgcgaat cagaccgaag gctggcactc
    30001 cgttatcagg ctgtggaacc agctgctccc caaaccccgg aaacaccacg caatcactga
    30061 catcgaatcg gttgccacta acgtcaatta aatcaacacc aacgcggtag ttttgcatta
    30121 gcatcagcaa gacagacgcc gtctctatat tgtctcccaa aaagaatcga atactttcag
    30181 gcagtgagaa ctcaggcgaa ccggcactgg ttttaaggtc gatacgtacg ccaggttcgt
    30241 ttttagaatt ggttgtccat gacgcccgtt caacaaaaag gtcagcaacc acgagatcga
    30301 ccgtggtctg aaatcggcaa ctcgtatctt ggacgggctt gccagccaac tctgttcccg
    30361 aagggatcaa gataggctct ttcaaagctg ctttgggttc aaaaaccatc atggtcgcag
    30421 caggcatcgg ccgaagaatc tgaggaacca agatgctggc aagctcttgc gcaatctcag
    30481 gaaactcgtc gcttagctta tgtcgggtgt gaccattaag aaaagcaaca ccttcaagca
    30541 atctctcgat atccggatct accgaaggtg taccgagcat cggcgctagg gccgggttgt
    30601 cgcgcgcgaa ctcttgcgaa tactggcgca accgacgcaa ttcagccgag tagaacgttt
    30661 tatagtcagt tgccatcagt caccattgaa tcagtcatgc aacaaagttc tcagtttgca
    30721 gtccatgact gccttctccg aacgctaaca accaagtatc gcatagccac aaggtgtcac
    30781 atgattcgta gcacgcgctt gacgagactc gaaacttcat gagtctgcat gtgagccagc
    30841 atacccttac gcatgcctag tagaatagca cccgccttcg catggcaaca cattgctggt
    30901 catcataagt taccgagtcc aatcacgcgg gcaacgtaac aaatagtgtt aaggctagac
    30961 atatgaacac cgtttcagac tacacataga tactcttcag gactgcctta aatcaaacgt
    31021 ccaaactaac ggcaaatcaa tatcctcatc aatctttccc cgagcctgcc ttaacctccc
    31081 tattccgtcg aactttgtcc ggcaaatcca aacagtgaca accaaatgaa ctacgctgtc
    31141 gttattcccg ttatattttt ggtgccatca tgctagaaaa caccgcgctc ttggtcactg
    31201 ccctgctgtt tggtggcatg gtgctgtact cgttcggatt tgcagctttt attttcaata
    31261 atttgcctgc tgaactcgct ggccccacga tccgcaaagc attcccgcac ttctacatct
    31321 ttgtcatggt gacagcctta gtcgcggctg tactactgtg gtcggtgaat cccacctcgg
    31381 ccatcctaat ggctatcatc gcagtcacca cgctacccac ccgacagttg ctgatgccag
    31441 ccatcaaccg tgccaccgac accggtcaaa agtcacgctt caaatggctg cacaccttct
    31501 cggtgttgat tacgctagcg cacatggcga tggccgcgat tgtgctcaca cgctttgtct
    31561 gagtttgtct gaaatgac
//
LOCUS       DATBNL010000268         2313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_102679, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000268 DATBNL010000000
VERSION     DATBNL010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102679"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            407..1096
                     /locus_tag="VIC30_04490"
     CDS             407..1096
                     /locus_tag="VIC30_04490"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEY7803676.1"
                     /translation="MFRPMARSGSVGVALRVPVEEANTAFFIISVKGFTVMQESALQT
                     LLSRRSVKQVGSPGPSNGEIEQALACVTCAPDHAQLRVWEFVLIEQPEIVAVGEKAIA
                     VLAEHGKPMTDDKQASTRAWLTEVPLLVGLGYKVHHDHPKVPEIEQTLSMGAGVMNFQ
                     NALHAMGFASYWSTGLATFTEDMAEYLGFDTLDYQFVGFLVVGTPKSAVLPANRPEPW
                     SVARRFAASTR"
     gene            complement(1061..2158)
                     /locus_tag="VIC30_04495"
     CDS             complement(1061..2158)
                     /locus_tag="VIC30_04495"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY7803677.1"
                     /translation="MIILLASLALTTLVVVTQRWHLVLTSDSIDGIQKVHAGHTPRIG
                     GLGIYLALWVGVGLVDDGHVQLLKLLLLAALPALLFGLAEDMTKRVGIKARLLATMAS
                     GVLAWWLTGYALWSLDIPLIDALLSHSPIAVIFTAFAVGGVANAINLIDGFNGLASGT
                     LLICLAGLGVLAGTQGDLELVRITILIGAATLGFFLLNFPFGKIFLGDGGAYMLGFML
                     AWTAVMVAMRHPDTISPAAVLLICSYPVLETVFSMVRRARRGQSVDQPDRSHLHSLVY
                     RRIVPKLVRRGYAQRLGFLSNSATSPVLWLFACAPVVAGVLLRDNTTACWAVLVVMAI
                     AYDAIYRRLSSFRWSVLGVNLTCRRSKTPSH"
BASE COUNT          577 a          567 c          628 g          541 t
ORIGIN      
        1 gcacgtaaag cgacggcttc cgggcaataa ccgctgcagc cgatggcgtg gtattcgctt
       61 gagggtgttt ttgcagtgct tgaagaataa tgtgggcatc tcttggactt tgacagtgac
      121 agtggcagct tttacgcttt aaggagcctc gtacaaccca caactcgcct tcggaaggta
      181 tccttcagaa gcgctaattg cgctaaaccg gcatacatac actatatttt aactagacaa
      241 tgttttagtt tcttgcaatt ccttgcctct tgtggcgacc ctgatctcaa agtgtgtgat
      301 ggccgcttcg tttgagtctg attaggcact ttgttgttct gtttgttctc tttgtgcctt
      361 ttgtgtggat ttcaatggta gacgcaagac gaggaaggta tctcttttgt ttcgtccaat
      421 ggcacgctcg ggcagtgttg gcgtcgccct gagggtaccg gttgaggaag ctaacacggc
      481 attttttatt atttcggtta aaggatttac ggtcatgcaa gaaagcgcct tacaaacatt
      541 gctctcacga cgatcggtca agcaagtagg tagtccaggg ccaagcaatg gggaaatcga
      601 gcaggctttg gcgtgcgtaa cgtgtgcgcc tgatcatgcc cagcttcgag tatgggagtt
      661 cgttttgatt gagcagccag agattgtggc tgtcggcgag aaagccattg ctgtgttagc
      721 tgagcacggt aagcccatga cggacgacaa acaggcctca acgcgcgcct ggctcaccga
      781 ggtacctcta cttgtggggt taggctacaa agtgcatcac gatcacccca aggttccgga
      841 gatcgagcag accttatcca tgggcgctgg tgtcatgaat ttccagaatg cgttgcacgc
      901 aatgggtttt gcgagctact ggagtactgg tttggcaacg tttactgagg atatggctga
      961 gtacctgggc tttgacactt tagactatca atttgttggt ttcttggtcg ttggcacgcc
     1021 aaaatctgct gttttgcccg caaaccgacc cgagccatgg tcagtggcta ggcgttttgc
     1081 tgcgtcgaca cgttagattg acccccagta cagaccatct gaagctcgat agacgtcgat
     1141 agatggcgtc gtaggcaatg gccatgacca caagaacggc ccagcaggcc gtggtgttgt
     1201 cgcgtaacaa aacgccggcc accacgggcg cgcaagcaaa aagccatagt actggggagg
     1261 tggctgaatt agacaagaag cctagacgtt gcgcatagcc ccggcgcacc agcttgggta
     1321 ctatgcgcct gtataccaag ctgtgtaggt ggctgcgatc gggctggtca acagactgcc
     1381 cacggcgcgc gcgtctgacc atggaaaata cggtttccaa aaccggataa ctgcaaataa
     1441 gcaacacagc agctggtgag atggtgtcgg gatgacgcat ggcaaccatg actgcggtcc
     1501 aggccagcat aaaacccagc atgtacgcgc ctccgtcgcc tagaaagatt tttccgaatg
     1561 gaaagttcag cagaaaaaac cccagcgttg cggcaccgat taggatcgtg atcctcacga
     1621 gttccaagtc gccttgggtg ccagccagta cacccaatcc agccagacaa atcaagagcg
     1681 tcccagaagc taaaccatta aagccgtcga taaggttgat ggcattggcg accccgccta
     1741 cggcaaatgc ggtaaaaatc actgcaattg gtgaatgcga caatagtgca tcaatcagcg
     1801 gtatatcaag tgaccacagt gcatagccgg tgagccacca agcgagaacg ccgcttgcca
     1861 tggtcgccag taagcgggct ttgatgccca cgcgtttagt catgtcctct gcgagaccaa
     1921 acaatagagc cggaagcgct gccaagagta ataacttgag taattgcacg tgtccgtcgt
     1981 cgaccaagcc cacgccaacc caaagcgcca agtagatacc taacccacca atacgcgggg
     2041 tgtgaccagc atgtactttc tggataccat cgattgagtc cgaggtcaaa actaaatgcc
     2101 agcgctgcgt gacaactacc agcgttgtca atgcgagcga cgccagcagg attatcatcc
     2161 aagcgtctgg tgctaagctg agttcaatca tttgaagggt aagcgagggt aagccgaagt
     2221 tgtcatgagc ttgtacagaa caagtagtgg aaagcccgag tcagatagat gtttcatggt
     2281 ttgtagatta attgcattgc caaacattaa ttg
//
LOCUS       DATBNL010000269        10537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_33125, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000269 DATBNL010000000
VERSION     DATBNL010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 10537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10537
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33125"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..863
                     /locus_tag="VIC30_04500"
     CDS             <1..863
                     /locus_tag="VIC30_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012746742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEY7803678.1"
                     /translation="GCIEDDLIREFTQPTHAQGEPGMAMAGTPKRMRYGITADEAHRF
                     GLPCGGTLELLLEFNPDAQLLTELIGRLEQGDLVRRITNMQDGQVRLETTETADSLKI
                     QDNELINTLGPSYRMLLIGAGQLGEYIATMAIFNGFSVTVCDPREEYASGWTTTGVAR
                     MSDWPDDAVKLFKPDRRTCVLALTHDPKLDDLALLEALETDAFYVGAIGSRGNNGARR
                     KRMIEHFDQTEESLKRLRGPIGIYIGSKTPAEIAVSVMAEVLAVKNDVPLPRDMDVGH
                     AKSAKEQSAA"
     gene            complement(890..1510)
                     /locus_tag="VIC30_04505"
     CDS             complement(890..1510)
                     /locus_tag="VIC30_04505"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY7803679.1"
                     /translation="MQPVLTYPLLYSYRRCPYAMRARMGLRVAQIKCELIEINLRDKP
                     EHMLRVSPKGTVPVFCLSDREIIDESLDILRWALQQYDPNHWLSGLTNETACWLLTQN
                     DGPFKQALDQYKYASRFPDVDPAVARDAAMQALILPLAELLTDRPYIGGDAPVLQDIA
                     IFPFVRQFAGVQPDWFAEQAPKPVQQWLTHWVESDLFKAIMQKPQT"
     gene            1845..2855
                     /locus_tag="VIC30_04510"
     CDS             1845..2855
                     /locus_tag="VIC30_04510"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY7803680.1"
                     /translation="MKLVKKSYLAAMAVAVSAFGTGVAQAECGNVTISEMNWASAQAA
                     ARVDEFILKNGYGCNAETVPGDTVPTATSMTEKGRPDIAPELWMNTIKEQIDRAVGEG
                     RLTIVGDTLEDPAKNAGEGWWIPRYMLEKNPELATIEGVKKNPQLFKDPEDPGKGRVV
                     GCPSGWACQIITENLFRAFDMEEAGFNLVDPGSGAALAGAIKKAFNRGQGVLAYYWAP
                     TSLIAELDLVRIKLAPYNAQEFESCIGVANCPDPKPNGFAASEIKTVASTDFANSSPE
                     AMGYLKARVWPADAFGKVLTYMETEQADGQAAAQWFLKNHEAVWSQWVPADVAAKVKA
                     AL"
     gene            2952..3839
                     /locus_tag="VIC30_04515"
     CDS             2952..3839
                     /locus_tag="VIC30_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     permease"
                     /protein_id="HEY7803681.1"
                     /translation="MIWSSDFPQIADSTLRAMSKGIDSGYLAFSRAYGASIEAFFEPL
                     LYFLIWFERLLLGSPWWLVIAVIAAVGYAASHRITISIGIAIALSLIGLFGMWENTMQ
                     TMAMILVCTLLSILIGIPIGIFMSRSERAQKLITPVLDVMQTMPSFVYLIPVVMLLGI
                     GRVPGVIAVVVYAIPPVIRLTNLGIRLVDKEVLEAADAFGASRIQKLLREQLPLALPN
                     IVAGINQTIMMALAMVVIASMIGVRGLGQPVLQAVTNQYFALGLFNGIAVVVLAIIFD
                     RVTQSFGLRLQKHREGARQ"
     gene            3836..4888
                     /locus_tag="VIC30_04520"
     CDS             3836..4888
                     /locus_tag="VIC30_04520"
                     /inference="COORDINATES: protein motif:HMM:TIGR01186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY7803682.1"
                     /translation="MSADTIISIKNLYKVFGKDPKKAMQLVHQGMGKDELLDKTGHVI
                     GLSNVNLDMERHRIQVVMGLSGSGKSTLIRHINRLIDPTEGQILVDGQDVLKLDPQEL
                     RDLRRHKISMVFQKFALFPHRTIMENVGYGLENQGIDKAKINETAERWIHRVGLGGFE
                     THYPGQLSGGMQQRVGLARALATDAEILLMDEAFSALDPLIRAEMQDILLDLQNELEK
                     TIVFITHDLDEALRIGDTIAILRDGEIVQNDDPQNILMKPADSYVANFMKDINRARVL
                     RVRAIMKDYDPADEGPLVKGSTTIEEALQIFAETAGDRLIITDRKGNKVGRLTVEDLI
                     RGIRRPTTEEIEADTA"
     gene            complement(4921..5721)
                     /locus_tag="VIC30_04525"
     CDS             complement(4921..5721)
                     /locus_tag="VIC30_04525"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY7803683.1"
                     /translation="MAHRNPTLYHAASSYYSMVARYALVLSNIDYDSRLLDIHKKREQ
                     LNAWYVAINPAMTVPALQVGDQVLGSSTEIVQYAVASRPEQWFESAASLEQQAQIAHL
                     VQLHENFEVERLSFNAFMQKLPPLRLLFPQLLRKICKQLSEQIEQGAPDLEALKAKLA
                     LNQSRLEYFTGAPLDVRQSQQIKLAQALVNAFGQAPAGQWLCGDKPSHADVVLVVFLA
                     RLKMVGLLDQVQVPRAWVDYLEQKTQTSAFKDADVWVKLQPLRLLSHR"
     gene            5747..7096
                     /locus_tag="VIC30_04530"
     CDS             5747..7096
                     /locus_tag="VIC30_04530"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HEY7803684.1"
                     /translation="MNRIRIAWIAIFVILSVVYWGSLNSVELTFEPWALRKSLLYYSG
                     IVAIGMMSVGMILAMRLHWVESWLGGLDTHYRLHKWLGISAVLAAVVHWLVKLEPKWL
                     AKHGFVAADTFKTPAGTVGFFDHADPFHVIRGFAKDVGEWTIYALIVLAIIAIWRRLP
                     YRGFFKTHRLMAIVYLLLAFHSIVLFSKLGWNSPIGVLMGCLMAAGIIGALVSLFGRT
                     GHRHQHEGSLSRIVGHDSDNMIEIHLKVDQGWPGHHAGQFAFLTFTHQEGAHPFSISS
                     AWDPASRDISFHIKRLGDFTNTLPENLTLGQTVRIEGPYGRFEFEPEEADQIWIAGGV
                     GLTPFLARLQAIAELRDKDATTNTIHFYLCVRTADTDLVQTIRTLSAKTGVRLTTVVS
                     GTDKPLTGERIRTDNPDWQGAHVWFCGPAGLGQSVRQDLVANGFNAGRFHQELFEMR"
     gene            7317..7559
                     /locus_tag="VIC30_04535"
     CDS             7317..7559
                     /locus_tag="VIC30_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803685.1"
                     /translation="MKHISAGWLRFLVILLALWSAFGVAVATMIVYGVFNNVAMTPPV
                     MATAVATGTGILTTLVGLAVLGIVKRINRALEGASS"
     gene            7556..9445
                     /locus_tag="VIC30_04540"
     CDS             7556..9445
                     /locus_tag="VIC30_04540"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HEY7803686.1"
                     /translation="MSQLNRILTVGTLGFLIGMATASAQQWPAYGGALGGGQYSAADQ
                     ITPENVHKLEPVWTYHTGDFSNGENDTRKTTFEANPIYRDGKLFFCTPYNRVVALETE
                     TGEELWNYEPTPKLDRNYNQQHSLICRGVSYWESGREGRCEKRIIAPVLDGRLFALDA
                     TDGTMCKDFGENGTINLNQGVAKAQNGAVNVTSPALVFEDLAIVGMAIGDNQSVDMAD
                     GTVRAFDVRTGEQRWSWDPIPAQFRAQSGAANAWAPLSLDADTATLFVPTTSPSPDYW
                     GGFRAPNLDKANAVVALDARTGELRWSQQLVRHDLFDNDLPAQPALADKIVDGKRKPA
                     VVQVTKMGTIFVLDRQTGEFMFETIDTPVPQTDVPGEYTAATQPVPVLPKPVAKQGFT
                     DKDVWGITPIDQAMCKDMIKGMRADGLYTPPSVQGSVQMPFFGGGSNWGGMAFDPERR
                     LVITNVMNLAQWVRLVPADGPDKIKEGELGRQKGAPYMMRRGILLSPLGVPCNAPPWG
                     EISAVNIDTGELVWRVPLGQVPLPMGIKAPSSWGSPNIGGPIATSTGLVFIAATMDAK
                     IRAFDAWTGEEVWSHDIPFDGAATPSTFVSEKNGKQYLVIAAGGSALLRPRLGDAIVA
                     FALSD"
     gene            9470..9544
                     /gene="pqqA"
                     /locus_tag="VIC30_04545"
     CDS             9470..9544
                     /gene="pqqA"
                     /locus_tag="VIC30_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008247588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone precursor peptide PqqA"
                     /protein_id="HEY7803687.1"
                     /translation="MTWTTPTFVDMRFGFEITMYIANR"
     gene            9549..10529
                     /gene="pqqB"
                     /locus_tag="VIC30_04550"
     CDS             9549..10529
                     /gene="pqqB"
                     /locus_tag="VIC30_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011800146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEY7803688.1"
                     /translation="MQQTRLLVVGSAAGGGFPQWNCNCQNCQAVRQNDPRYQVRTQSS
                     VAWSRDGQQWLLLNASPDILVQIQRCQPLQPKSGSRDTGIAAVMLMDAQIDHVTGLLM
                     LREHGQALPLYATREVFSDLSDGFALTKLLSHYCGIEQHIVEPTETTNTADTSDTALE
                     NPCSPCSITWPWLPDAHAQAVALQSKPPPYSAWRHQPRVGDNVGVMLVNERTGKRLFY
                     APGLGHLDATIWQCLQQADVVLVDGTFWTDDEMIVQGLGKKTAQQMGHLPQSGSAGML
                     EALNELPETTRKILIHINNSNPILNDQGPEREALTQSGIEVAYDGMEIWF"
BASE COUNT         2468 a         2782 c         2809 g         2478 t
ORIGIN      
        1 gtggttgtat tgaagatgac ctgatacgag aatttaccca acccacccac gcacagggcg
       61 aaccgggcat ggccatggca ggcacaccca aacgcatgcg ctatggcatc accgctgacg
      121 aggcgcaccg atttggactg ccttgcggtg gcacgcttga attgctgctt gagttcaatc
      181 ctgatgcgca attactgact gagcttattg gcagactcga acaaggtgac ctggttcgtc
      241 gcatcactaa catgcaagat ggccaagtca ggctagagac aactgagacc gcagacagct
      301 taaagattca ggacaatgag ctcatcaaca ccttgggtcc gtcctatcgg atgctgttaa
      361 ttggtgctgg ccaactcggt gagtacatcg ccacgatggc gatttttaat ggctttagcg
      421 tcaccgtttg tgaccctcga gaggaatatg cctcaggctg gacaaccacg ggcgtggcac
      481 gcatgagcga ctggcctgac gatgcggtca aactattcaa gcctgatcgc cgcacgtgtg
      541 tgctggcact cacacacgac cctaagcttg atgacttagc actgcttgaa gcgctcgaaa
      601 cagatgcctt ttatgtaggt gccattggct cacgcggcaa caatggcgcg cgtcgcaagc
      661 gcatgatcga acatttcgat caaaccgagg agtcgctcaa acggttgcgc ggcccgatcg
      721 gcatttacat tggcagcaaa acgccagcgg agatcgcggt cagcgtcatg gctgaggtgc
      781 ttgccgttaa gaacgatgtg ccattgccac gtgacatgga cgtcggtcat gccaagtcag
      841 ctaaagagca atcagccgct taggtaagct tcggtaactt tcggtgaact taagtctggg
      901 gcttttgcat gatggcttta aacagatctg attcgaccca atgggtaagc cattgctgga
      961 ccggtttggg tgcctgctca gcgaaccagt cgggctgcac cccggcaaac tggcgcacga
     1021 acggaaagat ggcgatgtct tgcagcaccg gcgcatcgcc accaatataa ggtcggtctg
     1081 ttagtagctc agcgagcggc aaaatcagcg cttgcatggc tgcatctcta gctacagccg
     1141 gatcaacatc cggaaaccgc gaggcatact tatattgatc gagcgcttgc ttaaatggcc
     1201 catcgttttg tgtgagcagc caacaggcgg tttcatttgt caggccactt aaccagtgat
     1261 ttgggtcgta ctgctgcaaa gcccaacgca ggatatcgag gctttcatcg ataatctcac
     1321 gatcgcttag gcaaaaaacg ggcaccgtcc ctttagggga taccctaagc atgtgttcgg
     1381 gcttgtcacg caaattgatt tcaatcaatt cgcactttat ttgcgcaacc ctaagcccca
     1441 tgcgggctcg catggcataa ggacatcgac gatacgaata aagcaaggga tatgtcagaa
     1501 caggttgcat tgttgttttt tacgatacgg aatgttcaat aaggttaagt tggcagatgg
     1561 tcgcaaagtt ggttagactc attgagtcgt aactagcacc tagtttgctt gtgtttccat
     1621 gtaaacacat cttgctttgc ttatgcaaag cgtcaatatg ccccaccgag tggggtgtca
     1681 aatgctcttc gagcaaccgt tgtccctcgc ggggcatacc agcgtcactt gtggcgcatc
     1741 accggacaag ttgtgcaacg tagttttatg cgcagcggcg ttcagactca ccaggtctga
     1801 tcgtgtccac aagccatctg gtttgaaaaa cggagaacgt acttatgaaa ctagtcaaaa
     1861 aatcttatct tgctgccatg gcggttgccg tcagcgcgtt tggtacgggt gttgcccaag
     1921 ccgaatgtgg caacgtgacc atctcagaga tgaactgggc cagcgctcag gccgctgctc
     1981 gcgtagatga gttcatcctc aaaaatggtt acggttgtaa cgccgagacc gtgccgggcg
     2041 atactgtgcc aaccgccacc tcaatgacag agaaaggccg tcctgacatc gcccctgagc
     2101 tctggatgaa caccattaaa gagcaaatcg accgtgctgt gggtgaaggc cgtctgacca
     2161 tcgttggcga caccttggaa gacccggcga aaaatgccgg tgaaggctgg tggatcccgc
     2221 gctacatgct cgagaaaaat cctgagctcg ccaccatcga aggcgtgaag aaaaaccctc
     2281 agttgttcaa ggaccctgaa gatccaggta aaggccgtgt tgtgggctgc ccctctggct
     2341 gggcatgcca aatcatcaca gaaaatctct tccgcgcatt tgacatggaa gaagctggct
     2401 ttaacctggt agacccaggt tctggtgctg cgttggctgg tgccatcaag aaggctttca
     2461 accgtggtca aggcgtactc gcttactact gggcacccac atctttgatc gctgagctcg
     2521 atctggtgcg tatcaagttg gctccctaca acgcacaaga gtttgagtcg tgcattggcg
     2581 tggctaactg cccggatccc aagcccaacg gctttgccgc ctccgagatc aagacagtgg
     2641 cctctaccga ctttgctaac agcagtcctg aagccatggg ctatttgaaa gcacgagttt
     2701 ggcccgcaga cgccttcggc aaggtgctga cttacatgga aaccgagcag gctgatggcc
     2761 aagccgctgc ccagtggttc ttgaagaacc acgaagccgt ctggtcgcag tgggtcccgg
     2821 ctgacgtcgc cgccaaagtc aaggcagcgc tgtaataccg ctggctacct ccggtagcac
     2881 cagtgggtcc gccctcacca gagggcggac ctgccgccca agatttcctc aaaaaataaa
     2941 ggcgagcaga tatgatctgg tctagtgatt ttccccaaat cgctgatagc acccttcgtg
     3001 ccatgtccaa aggcattgac tcgggctatt tggcgttttc tcgcgcgtat ggcgcgtcaa
     3061 ttgaggcgtt ttttgagcct ctgctgtatt ttctgatctg gtttgaacgg ctactgttgg
     3121 gttcgccctg gtggctggtt atcgcggtga tcgccgcggt cggttacgcc gcatcacacc
     3181 gcatcaccat ttcgattggc attgcgattg cactgagttt gattggtttg ttcggcatgt
     3241 gggaaaacac catgcagacc atggccatga ttttggtgtg tacgctccta tcgattctga
     3301 tcggcattcc cattggtatt ttcatgtccc gatccgaacg ggcacaaaag ctgatcacac
     3361 cggtattgga cgtcatgcag accatgccaa gctttgtata cctgatccct gtggtgatgc
     3421 tgcttggcat tggtcgtgta cccggtgtga ttgccgtggt cgtgtacgcc attccccccg
     3481 tgattcgtct gaccaacctt ggtatccgac tcgtcgacaa agaagtactg gaagcagcag
     3541 acgcctttgg cgcgagtcgt attcagaagt tattgcgaga gcaattacca ctggcgctac
     3601 ccaacatcgt ggctggtatt aaccagacca tcatgatggc attggccatg gttgtgattg
     3661 cctccatgat tggtgtgcgt ggcctggggc aacccgtgct gcaagcagtg accaatcaat
     3721 actttgcact gggcttgttt aacggtattg ctgtcgtggt actggccatt atctttgatc
     3781 gcgtgacgca gagctttggt cttcgccttc agaaacatcg ggagggcgca cgacaatgag
     3841 cgctgacacc attatctcga tcaagaacct gtacaaggta tttggtaaag atcctaaaaa
     3901 agccatgcaa ttggtgcatc agggcatggg taaagacgag ttgctcgata agaccggtca
     3961 cgtcattggt ttgagcaatg tgaacctcga catggaacgt caccgtattc aagtggtgat
     4021 gggcctgtcg ggctcgggca aatcaaccct gattcgccac atcaaccggc tcatcgaccc
     4081 caccgagggg cagattctgg ttgatggcca agatgtattg aaactcgacc cgcaagagtt
     4141 gcgtgacttg cgacgccaca agatttccat ggtgtttcaa aagtttgcgc tgtttccgca
     4201 ccgcacgatc atggaaaacg tcggctatgg cctagagaac caaggcatcg acaaagccaa
     4261 gatcaatgaa actgcagagc gctggattca ccgcgtgggc ttgggtggat ttgaaaccca
     4321 ttacccgggt caactctctg gtggcatgca acaacgtgtg ggtttggctc gagccttggc
     4381 cactgatgca gaaatcctct tgatggacga agcgttttct gcgttggatc cactcattcg
     4441 tgccgagatg caagacatct tgctagacct gcaaaacgaa ttggaaaaaa cgatcgtctt
     4501 cattacgcac gacctcgatg aagccttgcg cattggcgac acgattgcca tcttgcgtga
     4561 cggtgaaatc gtacaaaacg acgacccgca aaatatcctc atgaaacctg ccgacagtta
     4621 cgtggcgaac ttcatgaagg acattaaccg ggcacgtgtg ttgcgtgtgc gtgcaatcat
     4681 gaaggactat gacccggctg acgaaggtcc cttggtcaaa ggcagcacga ccattgaaga
     4741 ggccttacag atctttgctg aaaccgcggg tgatcgtttg atcatcaccg atcgcaaggg
     4801 caacaaggtg gggcgtttga cggtcgagga tctgatccgc ggcattcgtc gtccaaccac
     4861 ggaagaaatc gaggctgata ctgcctgatt tcacgtcacg tcaagccaag tcaggtcaca
     4921 ttagcgatgt gacagcagcc gcaatggttg aagtttgacc cagacatcag cgtctttaaa
     4981 cgctgatgtc tgggtttttt gttcaaggta gtcaacccat gcgcgcggca cctgcacttg
     5041 atcaagcaat ccaaccatct taagtcgagc cagaaacaca acaagcacca catcggcgtg
     5101 gctgggtttg tcaccgcaaa gccactgtcc ggctggagcc tgaccgaacg cgttaactag
     5161 ggcttgggcc aactttattt gctgcgactg acgcacgtcg agtggtgccc ccgtgaagta
     5221 ttccaagcgc gattgattca aggcaagttt ggcttttaat gcctcaagat cgggcgcccc
     5281 ctgttcgatt tgttcggaca attgcttgca aatcttgcgc agcagctgcg gaaacaacaa
     5341 acgaagcggt ggcagtttct gcataaaggc attaaaactt aagcgctcga cctcaaagtt
     5401 ctcgtgcaac tgaaccaaat gtgcaatttg cgcctgttgc tcaagcgatg cagccgactc
     5461 aaaccattgt tcaggacgac tcgcgaccgc gtattggacg atttctgtgc tgcttcccaa
     5521 aacctgatca cccacctgca acgcaggcac ggtcatggcc ggattgatgg ccacatacca
     5581 cgcattaagt tgctcacgtt ttttgtgaat atcaagcaaa cggctgtcgt agtctatgtt
     5641 agacaacacc aacgcataac gcgccaccat ggagtagtac gacgatgcag cgtgataaag
     5701 cgttgggtta cgatgtgcca ttcgtcactc tcctgatttg tgtttaatga accgtatccg
     5761 tattgcctgg atcgccattt ttgtcattct atcggttgtc tactggggca gcctaaattc
     5821 agtggaattg acttttgagc cttgggctct gcgaaaatca ttgctctact atagcggcat
     5881 tgtggcgatt ggcatgatgt cagtcggcat gattctggcc atgcgcctac actgggtcga
     5941 atcttggcta ggtggcttag acacacacta tcgactgcac aaatggctgg gcatttcggc
     6001 cgtgcttgcc gcagtggtgc actggctggt caagctcgag ccaaagtggt tagccaagca
     6061 cggatttgtt gcggccgaca cctttaaaac gccagcgggt acggtcggat tttttgatca
     6121 tgccgacccc tttcacgtca tacgtggctt tgccaaggac gtcggtgaat ggaccattta
     6181 cgcactgatt gtgcttgcca tcattgccat ttggcgacga ctgccctacc gcggcttttt
     6241 taaaacccac cgcctaatgg caattgttta cttactgctc gcgtttcata gcatcgtgct
     6301 ctttagcaag ctcggttgga acagtccgat tggtgtgctc atgggttgcc tgatggcagc
     6361 tggcattatt ggtgcgttgg tgtcattgtt tggtcgcacc ggccatcggc atcaacacga
     6421 gggctcactt agtcgcatcg ttggtcatga ctcagacaac atgatcgaga ttcatctcaa
     6481 agtcgaccaa ggatggcctg gccaccacgc cggccaattt gcgtttctga cctttactca
     6541 ccaagaaggc gctcacccct ttagcatttc ctcggcttgg gatcctgcaa gccgtgacat
     6601 cagtttccac atcaagcgcc ttggtgactt taccaacacg ttgcctgaga acctgacatt
     6661 ggggcagaca gttcgtattg aagggccata tgggcggttt gagtttgagc cagaagaggc
     6721 tgatcagatc tggattgccg ggggcgtggg gttaacgccg tttctggcgc gcttacaagc
     6781 cattgctgag ctgcgggata aagatgcaac aacaaacacc attcattttt atctttgcgt
     6841 gcgcacggct gacaccgact tggtgcaaac catccgcacg cttagcgcaa agacgggcgt
     6901 gagactaacc actgttgtct cgggcacaga caaaccgtta actggtgaac ggattcggac
     6961 agataacccc gactggcaag gggcccacgt gtggttctgt ggcccggctg gccttgggca
     7021 gagcgtgcgc caggatctcg tggccaacgg gttcaacgcc ggccgttttc accaagaatt
     7081 attcgagatg cgctagcgta tcgtcaacac aacgacaggt acgtgttcaa ggcgagcagt
     7141 ttcaataaaa gcgagttaga ttatccaacc ccgttgctcg gtgcccgaat tttggttact
     7201 gtgactgcat gtcacgaaca gttgtttaac agtttttcat tacgcataat tcgtacaaag
     7261 aaactaatgt ttgaacattg agacattctt tgtctatccc ataggtatca catttcatga
     7321 aacacatctc agcaggctgg ttacgatttc ttgtaatcct gttggcattg tggtcggcct
     7381 tcggcgtggc tgtggcaacc atgattgtct acggcgtttt taataacgtg gccatgacgc
     7441 cgccggtcat ggccactgcc gtggccacgg gcacgggtat tttgacgaca ctggtgggat
     7501 tggccgtact gggcatcgtc aaacgcatca atcgtgcttt agaaggagcc tcgtcatgag
     7561 ccaactgaac cgtatcctca ctgtcggcac ccttggcttt ctgatcggaa tggcaacggc
     7621 tagcgctcaa cagtggccgg cttatggtgg cgctttgggc ggtgggcaat attctgccgc
     7681 agatcaaatc acgccagaaa acgtccataa acttgaaccc gtctggacct accacacggg
     7741 tgatttctca aacggggaga acgacactcg caagaccacc tttgaagcca acccaattta
     7801 tcgcgatggc aagttatttt tctgtacccc atacaaccgg gtggtggcac tcgaaactga
     7861 aacaggcgag gagttgtgga actatgaacc tacgcccaag cttgatcgca actacaacca
     7921 gcaacattca ttgatttgcc gtggcgtgag ttattgggag agtggccgcg agggacgttg
     7981 cgagaagcgc atcattgcac ctgtacttga tggtcgtctg ttcgcccttg acgcaacaga
     8041 cggcacaatg tgtaaagact tcggtgaaaa cggcacgatc aatttgaacc aaggtgtcgc
     8101 caaagcacaa aacggggcag tcaatgtcac gtcaccggcg ttggtgtttg aagatttagc
     8161 catcgtgggt atggccattg gtgataacca atcggtagac atggctgacg gcacggtacg
     8221 tgccttcgat gtacgcacag gtgagcaacg ctggtcttgg gaccccatcc ctgcgcagtt
     8281 ccgagcgcaa tcaggcgctg ctaatgcttg ggcgcctttg tccttggatg ctgacacagc
     8341 aacactcttt gtgcccacca ccagtccgag tccggactac tggggtggtt tccgtgcccc
     8401 aaacctagat aaagccaacg ccgtggttgc gcttgacgcc cgcacgggtg agttgcgttg
     8461 gtcacagcaa ctggtacgtc acgacctgtt tgataatgat ttgccagccc aacctgcact
     8521 tgccgacaaa atcgtcgacg gcaagcgcaa accggctgtc gtgcaggtca ctaagatggg
     8581 tacgatcttc gtgcttgatc ggcaaaccgg cgagtttatg tttgaaacca tagacacgcc
     8641 cgtgccacaa accgatgtgc caggcgaata caccgctgcc acccaacccg tgcctgtgct
     8701 gcccaaaccg gtagccaaac agggttttac tgacaaagat gtctggggta tcacaccaat
     8761 tgatcaggca atgtgtaagg acatgatcaa agggatgcgg gctgacgggc tttacacgcc
     8821 tcctagcgtg caaggctcag tgcaaatgcc gttttttggt ggcggcagca actggggtgg
     8881 catggccttt gatcctgagc ggcgccttgt gatcaccaac gtcatgaatc tggcgcaatg
     8941 ggtcagattg gtacctgccg atgggcccga caagattaaa gaaggcgaac taggacgaca
     9001 aaaaggtgcg ccatacatga tgcgccgtgg catcctcttg tcaccactag gcgtgccctg
     9061 caacgccccg ccttggggtg aaatctccgc agtcaacatc gataccggtg aactggtctg
     9121 gcgcgtgccc ttaggccaag taccgctccc aatgggcatc aaagcgccat catcgtgggg
     9181 tagccccaat attggtggac ccatcgccac atcaacgggc ctggtgttta ttgcagcaac
     9241 catggacgcc aaaatccggg catttgacgc ttggacaggc gaagaagtct ggtcacacga
     9301 cattccattt gatggtgcag cgaccccatc aaccttcgtc tcggaaaaaa atggtaaaca
     9361 atacttggtg attgccgctg gtggcagtgc cttgttacgc ccccggttag gcgacgccat
     9421 cgtggcgttt gcgctatcgg attagaaaac tgtttaagga gcaacgttaa tgacctggac
     9481 cacaccgacc tttgttgata tgcgtttcgg tttcgaaatc acgatgtaca ttgctaatcg
     9541 ctaaagagat gcagcagacg cgactgctcg tggtcgggtc tgctgccggc ggtggcttcc
     9601 cgcaatggaa ttgcaactgt cagaactgcc aagctgttcg gcaaaacgac ccgcgttatc
     9661 aagtacgaac tcagtcctca gtcgcttggt cacgagatgg ccaacagtgg ctgttgctaa
     9721 acgcatcgcc tgacattctc gtgcagattc agcgctgtca acccctgcaa cccaaatcag
     9781 gcagtcgcga cacgggtatt gcggcggtca tgctcatgga tgcgcagatc gatcacgtca
     9841 ctgggctttt gatgttgcgc gagcatggtc aagcgctacc gttatacgcc acccgcgagg
     9901 tcttctctga tctgagtgat gggttcgcac tcaccaagct gctgtcgcac tactgcggca
     9961 tcgaacaaca catcgttgag ccgacagaga ctacaaacac tgcagacacc tcagacactg
    10021 ccctcgagaa cccttgctcc ccttgctcga tcacgtggcc atggttgccc gatgcccatg
    10081 cgcaagcagt agccctgcaa agcaagcccc caccctattc tgcctggcgc catcaaccca
    10141 gagtcggtga caatgttggt gtcatgttgg tcaatgaacg taccggcaaa cgactgtttt
    10201 acgcccccgg tcttggccat ctagatgcca ccatctggca gtgtttgcaa caagccgatg
    10261 tcgtgctcgt cgatggtacg ttctggacag atgacgaaat gattgtccaa ggcttaggta
    10321 aaaagaccgc ccagcaaatg gggcacctgc cccaatcagg atctgcaggc atgctagaag
    10381 cactcaacga gctgccagaa acaacccgca aaattctcat ccatatcaac aatagcaatc
    10441 ccattctgaa cgaccaaggc cctgagcgcg aggcactgac acaatccggt atcgaagtgg
    10501 cgtacgatgg catggagatc tggttttagg tgatata
//
LOCUS       DATBNL010000270         2884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_102770, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000270 DATBNL010000000
VERSION     DATBNL010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102770"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VIC30_04555"
     CDS             complement(<1..349)
                     /locus_tag="VIC30_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803689.1"
                     /translation="MPQDPVKKPGTLSLNKTRVADTPDGGNSNDRAAGKPARKPASVK
                     TGARAHHRTRIQGEQRRAEPAPGAQRTGERKDDRTDQRNNERAGERANTRSRPQNRQG
                     REGREGRQSHRDRQ"
     gene            complement(359..790)
                     /locus_tag="VIC30_04560"
     CDS             complement(359..790)
                     /locus_tag="VIC30_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEY7803690.1"
                     /translation="MALLWVKTLHILFMASWFAGLFYLPRIYVNLAQATDPAVKTTLI
                     GMSHRLYRFMTILAYPAIGFGLWLYLYYGIGMGPGNGWMHVKLFLVGLIIIYHLVCRH
                     YLKLFEQGRNPHSHVFYRWFNEIPVVLMLAIIAMVVLKPSF"
     gene            complement(871..2130)
                     /locus_tag="VIC30_04565"
     CDS             complement(871..2130)
                     /locus_tag="VIC30_04565"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEY7803691.1"
                     /translation="MTELAQTMTAIGQRARAASRQMMRAKDADKSAALALIAQRIDAS
                     HDALVKANAADLEAAGARGLEQAMLDRLQLSPKALHTMAAGLRQIAAMPNPVGNISQS
                     VVRPNGMRVAQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNACVLRGGSEAIHSNLA
                     LAQIIRDALSETGLPTNAVQIIETTDRAAVGHLVTMTDYIDVIVPRGGKSLIRRLQDE
                     ARVPLIKHLDGNCHVYIDEYADLDRALDIAVNAKTYRFGICGAMETLLVHQQVAGAFL
                     PRMANAMREHDVQLRGCEQSRAIYPPMQLATEADWAEEYLAPILAVRVVDSIDQAIDH
                     IGQWGSGHTDAIVTQDLDRASRFEQEVDSSSVLVNLPTCFADGFEYGLGAEIGISTNR
                     LHARGPVGLEGLTTQKWVLHGQGQTRG"
     gene            complement(2256..>2884)
                     /gene="holA"
                     /locus_tag="VIC30_04570"
     CDS             complement(2256..>2884)
                     /gene="holA"
                     /locus_tag="VIC30_04570"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEY7803692.1"
                     /translation="RVVSLPEIGRQGLPDWIGQRLAAQQQKMGTDALQWLTDRVEGNL
                     LAAHQEIQKLALLYPAGEITLAQCQSAVLNVARYDVFALRDAMLEGDAARMLRVLRGL
                     RAEGEAPPLVLWAMAEEIRTLDRINRATQQGQPLGAAMKANRLFGAREQRARAALGRV
                     SSARWRRAVAHAHDVDRLIKGIGVPGRLTDAWHELERLGMSIAASRSG"
BASE COUNT          617 a          793 c          826 g          648 t
ORIGIN      
        1 cttggcgatc tcggtggctc tggcgaccct cgcgaccctc acgaccctgg cggttttgtg
       61 ggcggctgcg cgtgttggcg cgttcaccag cacgttcgtt gttgcgttgg tccgtacggt
      121 cgtctttgcg ttcacccgtg cgctgcgcgc ctggcgcagg ttcggcgcgt cgctgctcac
      181 cctgtatacg ggtgcggtgg tgtgcgcgag ccccggtttt aacgctcgct ggcttgcgag
      241 cgggtttgcc agcggctcgg tcgttggaat taccgccatc cggggtatca gccacgcgtg
      301 tcttattcag actgagggtg ccgggtttct tgacgggatc ttgtggcatg tggtgcgcct
      361 aaaaggaggg ctttagaaca accatggcaa tgatggcgag cattagcacc acagggattt
      421 cgttaaacca acgataaaac acatgcgagt gcgggttgcg accttgctca aatagtttga
      481 ggtaatgacg acacaccaag tggtagatga tgatcaaacc cacgaggaac agtttgacgt
      541 gcatccagcc attgccgggt cccatgccaa tgccgtaata caggtagagc cacaaaccga
      601 agccaatggc cgggtaggcc aggatcgtca tgaagcgata gagtcgatgg ctcatgccga
      661 tgagcgtggt cttcacagct ggatcggtcg cttgggctag attcacgtag attcgcggta
      721 gataaaaaag cccagcgaac catgacgcca tgaacagaat atgaagagtt ttaacccaca
      781 gtagcgccat tcgtgcctcc cgtaaccaat gggtaaatat cttgaggggt atgttttaag
      841 tgttgctgtc ttaattgcca ctgtcttgag tcaaccacgc gtttgcccct gaccatgcaa
      901 cacccacttt tgcgtagtga gaccctcaag gcccactggg ccgcgcgcgt gcaagcggtt
      961 tgttgaaatg ccaatctcag cgcctagacc atactcgaaa ccatcggcaa agcaggtcgg
     1021 cagattcact aaaaccgaac ttgagtcaac ctcttgctca aaccgactgg ctcggtcaag
     1081 gtcttgtgtg acgatggcat cggtatgacc agatccccat tgaccgatgt ggtcaatggc
     1141 ttgatcgatt gaatcgacca cacgtacagc cagaattggc gcaaggtact cttctgccca
     1201 gtctgcttcg gttgcaagct gcattggcgg gtagatggcc cgtgattgtt cgcagccacg
     1261 cagctggacg tcgtgttcgc gcatggcatt tgccatgcgc ggtaaaaaag cgccggccac
     1321 ttgctggtgc actaacaagg tctccatcgc tccgcaaata ccgaatcgat aagtttttgc
     1381 gttcacagcg atatcgagcg cacgatcaag atcagcgtac tcgtcaatat aaacatggca
     1441 gttgccatcg agatgtttga tcagcggcac ccgcgcttca tcctgcagac ggcgaatcag
     1501 gcttttaccg ccacgtggca cgatcacatc aatatagtcg gtcatcgtca ctaggtgacc
     1561 cacggcagca cgatcggtgg tctcaatgat ttgtaccgca ttggtgggca gcccagtctc
     1621 agacagtgcg tcgcgaatga tctgcgccaa tgccaggttg ctgtgtatgg cttcgctgcc
     1681 accgcgcaag acacaggcat taccagactt taagcaaagc gcagcggcat caatcgtgac
     1741 attggggcgc gactcataaa taatgccaat cacaccaagc ggcacgcgca tttgcgccac
     1801 acgcatgccg ttaggtcgca ccacgctctg gctaatgttg cccaccgggt taggcatggc
     1861 agcaatttgg cgcaagccag cggccattgt gtgaagtgcc tttggcgata gttgcaaccg
     1921 atcgagcatg gcttgctcaa gcccacgcgc gcctgcagcc tctaaatcgg ctgcgttggc
     1981 cttaaccaat gcgtcatgcg acgcatcgat gcgctgggca atcaaagcca acgcggctga
     2041 tttgtcggca tccttggcgc gcatcatttg gcgagaggct gcccgggcgc gctgcccaat
     2101 ggctgtcatg gtttgagcga gttcggtcat aggggtgtca atagaagtgc tgttaataga
     2161 agtgctgtca atagaaatac cgcaagcaag agattgatca agtcaatctt gatgtgggaa
     2221 ccttgcgatt gtgctgcgct ttgcatgatg acagtttagc ctgagcggct agcagcaatg
     2281 ctcatgccaa gtctctcgag ttcatgccag gcatcggtca atcggccagg cacaccaatg
     2341 cctttgataa gacggtcaac atcatgggca tgtgccaccg cacggcgcca gcgtgcgcta
     2401 ctgacgcggc ccaaggcagc gcgggcgcgt tgctcacgtg cgccaaacag tcggttggct
     2461 ttcattgcgg caccgagtgg ttgtccttgt tgggtggcac gattgatccg atcgagggtt
     2521 ctgatctctt cggccatggc ccacagcacc agtggtggcg cttcaccttc ggcacgcaag
     2581 ccccgtagca ctcggagcat gcgggcagcg tcgccttcga gcatggcatc gcgtaacgca
     2641 aacacatcgt aacgcgccac attgagtaca gccgattgac actgcgccag tgtgatttcg
     2701 ccggctgggt atagcagggc aagtttctgt atctcttggt gggctgccag cagattgcct
     2761 tcaacgcggt cagttagcca ttgcagcgca tcagtgccca tcttttgttg ttgagcggct
     2821 aggcgctggc caatccagtc aggtagcccc tggcgaccga tctcaggcag tgagaccacg
     2881 cgag
//
LOCUS       DATBNL010000271         4446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192233, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000271 DATBNL010000000
VERSION     DATBNL010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4446
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192233"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VIC30_04575"
     CDS             complement(<1..185)
                     /locus_tag="VIC30_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803693.1"
                     /translation="MKPVVIGAALLCLMSSVSAQEQTMTTYTTLSAPNYVDAGVQGMS
                     VGDMYVRRGDVALSAGGP"
     gene            283..1086
                     /locus_tag="VIC30_04580"
     CDS             283..1086
                     /locus_tag="VIC30_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008904509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803694.1"
                     /translation="MPQFKRYIGIDYSGAQTPIASLKGLRVYQVMLAKPNQKIHFETI
                     HEVMPPPGARKYWTRKGVALWLADQLADAVPTIVGIDHGFSFPLSYFEAHGLSRNWDA
                     FLDDFQYHWPTDGDGVYVDFVRDGSVGNGDARQGNARWRRACELRCRAKSVFHFDVQG
                     SVAKSTHSGIPWLRYLRKQGMDHLRFWPFDGWDVPKGDSVVLEAYPALYKTEFEVQGR
                     TPDQHDAYSIARWLCEADQDGRLEAALHPDLSNEDQSLASIEGWILGVT"
     gene            complement(1131..2627)
                     /locus_tag="VIC30_04585"
     CDS             complement(1131..2627)
                     /locus_tag="VIC30_04585"
                     /inference="COORDINATES: protein motif:HMM:NF019011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEY7803695.1"
                     /translation="MGQTQSSWRIALAGFHLESASFLPQVSSLSDFEIATSRQDDMVR
                     TYKGTNTVAGGFIEVCEKDGVEIVPLVYAYLGALGPASDDAVTAYAREIAHKTAQAEV
                     DGVLLHLHGACWAEGFDDVERFIIGELRQAIGNAIPVVVAFDYHGNIDSQTLKQIDAA
                     FAYRHSPHIDMGQTGQRAARGLLKILETGERPGLAIAKPGLVVPSIFSATALHPLADI
                     LAQARDLEQQANEDLDISIMAGFSYADSHNTGFSVVVVSWQGQAHAEQVANNFSDRIQ
                     KQKIQLYSPEPVLQVHEAVASAIIECPPPGKPIVLLEHADRINDSTYVLNALIDSDAP
                     SAYVPFLWDNDAAALANEAGTGNQITIAIGGWSSDRAGPRREHRALILGTGSKSYRVS
                     GQMMQGQQVHLGMTALLQIGGVVVSVVSNYAFTVDQDVYKVFGLDIKDFDIVVLRSKT
                     HFRQFFEPVASRILIVDTPDYGPADLTKIPYVRLNTKTVYPHSTESGQ"
     gene            complement(2635..4086)
                     /locus_tag="VIC30_04590"
     CDS             complement(2635..4086)
                     /locus_tag="VIC30_04590"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEY7803696.1"
                     /translation="MQADFIVRGARVINGEGTPAYVADIAVVDDQIVAVGDLSQWHAG
                     QTVQAKGKVVAPGFIDPHVHHDEAVLTDPLLTCMTSQGVTSVINGNCGFSIAPLTKAG
                     PLPAPLDLILDDHRERFNSYAAYRTALETNPPAVNSACLIGHGSLRVNEVRDLSRPAD
                     KDELARMQLALDQALSEGGIGLSTGPFYPPARAATTAELTAMAEIAHRHGKLYATHMR
                     DEGDHVVDALNETFQIGRDAKCGVHVSHHKCAGLANHGMSEVTLPMIEQAMRLQDVGL
                     DTTPWTASATMLNSGRHKQATRVIVSESVPYPEMAGRDLADIAQEWGVGLDEAVNHLI
                     PASGIFFIMDETDVQRILSFAHTIICSDGIHKGSHPHPRVWGTFPRVLGRYVRDQKLF
                     SLEEAIRRMTSMPADRFGLGKRGRLKVGHFADIVIFDPHTIGERATFERPIQPASGIE
                     AVYVNGRLVWDGEQATGQRPGKHLDKTVPTQVV"
     gene            complement(4088..>4446)
                     /locus_tag="VIC30_04595"
     CDS             complement(4088..>4446)
                     /locus_tag="VIC30_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803697.1"
                     /translation="AMIWAGLIGATMSFKRRFDPALFSAPPKTPWMAAAAGLVQSLTV
                     LIYLLPILWFSFFGPNMNFKRGFLLRHSRITSETLDFSTFWVAVAVPIMIVFILIHLA
                     ARWLSPDTERPRDLED"
BASE COUNT         1030 a         1161 c         1187 g         1068 t
ORIGIN      
        1 ggtcccccag cagacaatgc aacgtcacca cggcggacat acatgtcacc gactgacatg
       61 ccttgaacgc cggcatccac gtaatttggc gcacttaatg tggtgtaagt ggtcatcgtt
      121 tgttcttgtg cagacacgct gctcatcagg cagagtagtg cggcgccgat cacgactggt
      181 ttcataatag tgtccaaggt tgagtacttg ttgttaggag tacaaagtgt atcaggcaca
      241 cgtattggca gatcccggct tctgtcatgc aagaatagag gcatgcctca attcaaacgc
      301 tatatcggta tcgactattc cggcgctcag acaccaatcg ctagcctgaa aggcttgcgc
      361 gtgtatcaag tcatgctcgc taagcctaac cagaagatcc atttcgaaac tatccatgag
      421 gtgatgccac cgccgggtgc gcgcaagtac tggacgcgca aaggcgtggc cttgtggcta
      481 gcggatcagt tggctgatgc tgtacccacg attgtgggca tcgatcatgg tttttcattt
      541 ccattgtcat actttgaggc ccatggtctg tcacggaact gggatgcgtt tttggatgac
      601 tttcagtacc actggcccac cgatggcgat ggtgtttatg tcgactttgt gcgtgacggc
      661 tcagttggca atggagatgc ccggcaaggc aacgcgcgct ggcgccgagc ctgcgagtta
      721 aggtgccggg ctaaatcggt atttcatttt gatgtacagg gatcagtggc caaatccacc
      781 cactcgggga ttccttggct gcgttattta cgcaagcaag gtatggatca tctgcgcttt
      841 tggccatttg acggttggga tgtgcctaag ggggactcgg tggtgctaga agcttaccct
      901 gcgctctaca aaaccgagtt tgaagtccag ggccgaacgc ccgatcaaca cgatgcctac
      961 agcattgccc gctggctttg cgaggctgat caggacggca gactagaagc tgcgttgcac
     1021 ccagacctgt ctaatgagga tcagtcactt gccagcatcg agggctggat tctcggggtg
     1081 acctgaccgt atagtttgac tgtgtgatgt tcaattacgg cgatcgatgt ttattgacca
     1141 gactcggtgc tatggggata gaccgttttg gtgttcaggc gaacataggg aatcttggtt
     1201 aaatctgcag gaccataatc tggtgtgtca acaatgagaa ttcttgacgc gaccggttca
     1261 aagaattgcc ggaaatgggt cttggagcgc aaaaccacga tatcgaagtc ttttatgtcc
     1321 aacccaaata ccttgtagac gtcttggtca accgtgaaag cgtagttgct caccacactg
     1381 accacaaccc cgccaatctg aagtagcgca gtcataccaa ggtgcacctg ctggccctgc
     1441 atcatttgcc cgcttactcg gtatgatttc gagccggtgc ccaggatcaa ggctcgatgt
     1501 tcgcggcgcg ggccagcccg atctgagctc caacccccaa ttgcaatcgt gatctgattg
     1561 ccggtaccag cctcgttcgc aagtgccgct gcatcgttgt cccacaaaaa gggcacatag
     1621 gcacttgggg catcgctgtc gatcaaggca ttgagtacat acgttgaatc gttgatgcga
     1681 tcggcatgtt ccaataagac gatcggtttt cctggtggcg gacattcgat aatcgctgac
     1741 gcaactgcct cgtgcacctg cagtactggt tctggactgt agagttgaat tttttgtttt
     1801 tgaatacggt cgctgaagtt atttgcaacc tgctcggcgt gtgcttgtcc ttgccaagat
     1861 accacgacca cactaaagcc tgtgttgtgt gaatcggcat aagagaaacc agccatgatg
     1921 gagatatcaa ggtcttcgtt tgcttgctgc tcaagatccc gagcctgagc caggatgtca
     1981 gctagcggat gcaaagctgt cgcactgaag atactgggca caaccagtcc gggtttggca
     2041 atcgccagac ccggacgttc gcctgtttca aggattttca acaagccacg tgctgcgcgc
     2101 tgaccagttt gccccatgtc gatgtgtggt gagtgtctat aggcgaacgc cgcatcaatc
     2161 tgcttaagcg tctggctgtc gatgttgcca tgatagtcaa atgccaccac cacgggaatc
     2221 gcgttaccga tcgcttgtct gagttcgccg atgataaatc gctcgacatc atcaaagcct
     2281 tcggcccagc aggcgccgtg aaggtgtagt agcaccccgt caacttcagc ttgagctgtc
     2341 ttgtgtgcga tttcacgggc gtaagccgtc accgcatcat cggaggctgg tcctagtgcc
     2401 cctaggtagg cataaactaa tggaacaatt tccactccgt ctttctcgca cacttcgata
     2461 aaaccaccag caacggtgtt ggtacccttg taagttcgca ccatgtcatc ttgacgacta
     2521 gtagcgatct caaagtcaga taacgaactg acttgcggta aaaagcttgc ggattccaga
     2581 tgaaaccccg ctaacgctat tcgccaagaa ctttgtgttt gacccataga atatttacac
     2641 cacttgcgtg ggtacggtct tatcgaggtg cttgcccggc cgttggcctg ttgcctgttc
     2701 cccgtcccag actaagcgcc cattaacata gaccgcttcg ataccactag ctggttgtat
     2761 gggcctttca aaggtggcgc gttcgccgat ggtatgcggg tcgaagatca caatatcggc
     2821 gaagtgacca acctttagtc ttcctcgctt acccagcccg aaacgatctg ccggcatgct
     2881 ggtcatgcgg cgtattgctt cttcaagtga aaacagcttt tgatctctga catagcgccc
     2941 aagtacccga ggaaatgtgc cccagacacg cggatgaggg tgagagcctt tgtgtatgcc
     3001 gtcagagcaa ataatggtgt gcgcgaaaga cagaatgcgc tgaacatcag tttcgtccat
     3061 gataaaaaaa atgccagatg ctggtatgag atggttaacg gcttcatcaa gacccacgcc
     3121 ccactcttga gcgatatcag cgagatctcg accagccatt tcaggatagg gcaccgactc
     3181 ggaaacaatc actctggtgg cttgcttatg tcgtccagag ttaagcatgg ttgcacttgc
     3241 tgtccaaggc gtggtgtcca gacccacatc ctgaagcctc atcgcttgct caatcatggg
     3301 aagggtcact tcggacatgc cgtggtttgc tagcccggca catttgtgat gagagacgtg
     3361 cacaccacat ttcgcatcgc gcccaatttg aaacgtttcg tttagggcat cgacaacatg
     3421 gtcaccctca tcgcgcatgt gggtggcata aagtttgcca tgtctgtggg ctatttccgc
     3481 catcgcggtg agctcggctg tggttgctgc ccgggccggt ggataaaacg gacctgtcga
     3541 taaaccgatc cctccttcgg aaagcgcttg atcaagagcg agttgcatac gtgccaattc
     3601 atccttgtcc gctggtcgtg acaagtccct cacttcattg actcttaaag acccatgccc
     3661 tatgagacag gcgctattga ctgctggtgg gttggtctca agcgctgttc ggtaggcggc
     3721 ataagagttg aaacgctccc ggtgatcatc gagaattaag tccaacggcg ctggaagtgg
     3781 cccagccttg gtcagcgggg caatagaaaa gccgcagtta ccgttgatca cgcttgttac
     3841 accctggctc gtcatacagg tcagcaatgg gtccgtgagc accgcctcat catgatgcac
     3901 gtgtggatcg atgaagcctg gcgcaaccac tttgccttta gcttgaaccg tctgaccggc
     3961 gtgccactgg cttaagtcgc cgaccgctac aatttgatca tcgactaccg cgatatcggc
     4021 aacgtaagcg ggggtgcctt ccccgttaat cacacgggca ccacgaacga tgaaatcagc
     4081 ttgcatgtca gtcctcaagg tctcgcggtc gctcggtgtc gggtgaaagc cagcgtgccg
     4141 ctaagtgaat cagaataaaa acaatcatga tgggcacagc aacggccacc caaaatgtcg
     4201 agaagtccaa ggtttcggat gtgatacggc tgtggcgcaa taagaaccca cgcttgaaat
     4261 tcatgttcgg tccaaaaaaa ctgaaccaca gaatgggcaa caggtagatc agcacagtca
     4321 gtgattggac taggccagcg gccgcagcca tccatggtgt tttagggggt gccgagaata
     4381 aagccgggtc aaaccgacgt ttaaacgaca tcgtcgcgcc gatgagacca gcccagatca
     4441 tcgcgt
//
LOCUS       DATBNL010000272         3073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_13296, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000272 DATBNL010000000
VERSION     DATBNL010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13296"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..130)
                     /locus_tag="VIC30_04600"
     CDS             complement(<1..130)
                     /locus_tag="VIC30_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY7803698.1"
                     /translation="MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGPDP"
     gene            303..1289
                     /locus_tag="VIC30_04605"
     CDS             303..1289
                     /locus_tag="VIC30_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEY7803699.1"
                     /translation="MSTRTKAIRIEQHGGPEVLQLVEIDVARPADNEVTIAQRAVGLN
                     FIDIYFRTGLYQSALPHGLGFEGAGEVIAVGKSVKRLKVGDRVAYGQSPIGAYAEVRN
                     VPAGQVVKLPSGISFEEAAAMMLKGLTVQYLFRQTYRLQGGETILFHAAAGGVGLIAC
                     QWAKALGVKLIGTASTDEKTALAKKYGAWRTINYSKENVVEQVAALTKGKKVPVVYDG
                     VGKDTWETSLDCLQPRGLMVSFGNASGAVDGVNLGILAAKGSLYVTRPTLATHVPTPE
                     KTQAAADELFELVLAKKIKMQIDQRYTLDQAAQAHEALKARKTTGASIFVFD"
     gene            complement(1408..2445)
                     /locus_tag="VIC30_04610"
     CDS             complement(1408..2445)
                     /locus_tag="VIC30_04610"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEY7803700.1"
                     /translation="MSKKRTSLTQYLVEKQRNDKALPAELRLLIEIVSRACKTISHSV
                     SKGALGGVLGSLAQENVQGEVQKKLDVISNEVLLEANEWGGHLAAMASEEMETIHLIP
                     HRYPKGEYLLLFDPLDGSSNIDVNVSIGTIFSVLQAPPGASGRDIAEEDFLQAGYTQV
                     AAGYAVYGPQTMLVLTVGEGVVGFTLDREMGSWVLTHNEIQVPEDTKEFAINMSNARH
                     WDAPMKRYVDELLAGKTGPRDKDFNMRWIASMVADVHRIMMRGGVFMYPWDAREPNKP
                     GKLRLMYEANPMSMLIEQAGGMATDGRRRILDIVPSSLHERVAVALGSKNEVARVTQY
                     HLEADESGQTS"
     gene            complement(2491..>3073)
                     /locus_tag="VIC30_04615"
     CDS             complement(2491..>3073)
                     /locus_tag="VIC30_04615"
                     /inference="COORDINATES: protein motif:HMM:NF036590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminopeptidase N C-terminal domain-containing
                     protein"
                     /protein_id="HEY7803701.1"
                     /translation="LCLAGTVDDKRGSKYDSKSLAATQYAQAHNMTDRLGALRALIWH
                     PERDASVDQALSDFYDRFQNDPLVIDKWFAIQACAPTTTVAQVQTLIEHPAFVYRNPN
                     RLRALVFQFCINNPIGFHVADGSGYEFWAEHVIRIDQANPEVAARLARTLDHWTHHAE
                     PAKTRMRDALQRVADASDLSGNTREIVTKALTL"
BASE COUNT          699 a          788 c          873 g          713 t
ORIGIN      
        1 ttgggtcggg gccgccggca cgggctgcaa cggtgatttc acggatgatt ttggtccaaa
       61 gcttgccccg cttggcatct tgacgaccct tgcggtgctg aatattggcc catttgctgt
      121 gacctgccat gatgtttgaa ctttcctagc ttaaaagaag cattttagcc tgcctcacga
      181 tacactacct aacagtcacg gatagagtca cggctaggca ggttttatgg ttagtcttgt
      241 acctatcaag gtgctgacat cgttactatc acaaacaaca aacaagagat ttgggagcac
      301 ttatgagtac ccgcacaaaa gccattcgca ttgagcagca cggcggaccc gaggtcctgc
      361 agttggtaga aatcgacgtt gcgcgtccgg ccgacaacga ggtcaccatc gcccagcgtg
      421 cggtggggct gaactttatt gatatctatt ttcgcacggg gctctaccag tcagcattgc
      481 cgcacggtct cggatttgag ggcgccggcg aggtaatcgc cgtgggtaag tcggtcaagc
      541 ggctaaaggt tggtgatcgt gtggcttacg gccaaagccc gatcggtgcc tacgccgagg
      601 tacgcaatgt gccggcgggc caagtggtca agctgcccag tggcatttca tttgaagaag
      661 ccgcggccat gatgctcaaa ggcctcaccg ttcaatacct gtttcgccag acctatcgtt
      721 tgcaaggtgg tgagacgatt ctgtttcatg ctgccgccgg cggcgttggt ctgatcgctt
      781 gccaatgggc gaaagcgttg ggcgtcaagc taatcgggac ggcatccacc gacgaaaaaa
      841 cagcgctggc taaaaagtat ggcgcttggc gcaccattaa ctacagcaaa gagaatgtgg
      901 ttgagcaggt tgccgcgctg accaagggca aaaaagtccc agtggtctac gacggtgttg
      961 gcaaagacac ctgggagacc tcgcttgatt gcttgcagcc gcgtggtttg atggttagtt
     1021 tcggtaatgc ctctggtgcc gttgacggtg tgaacctagg tatcttggcg gccaaggggt
     1081 cgctgtatgt cacgcgtcca acactggcaa cccatgtgcc aacacccgag aagacgcagg
     1141 ccgcagccga cgagctgttt gaactggtct tggccaagaa aatcaaaatg caaattgatc
     1201 aacgctacac gcttgatcag gctgcacaag cacatgaggc acttaaagcc cgcaagacca
     1261 cgggtgcgtc aatttttgtg tttgattaag gggtaggact gcggagaaat accgcagaga
     1321 aagacttcac agaaagactg cgggacagaa ggcccgtaca accttaaaac ggttgtacgg
     1381 gccttctggt tttgctgagt cggtgtgtta gcttgtctgg ccagactcat cagcctctaa
     1441 gtgatattgc gtcacgcgcg ccacttcatt ttttgagcca agcgcgactg cgactcgctc
     1501 atgtaggcta cttggcacaa tatccagaat ccggcggcgt ccgtcagtgg ccatgccacc
     1561 ggcttgttca atgagcatgc tcatcgggtt ggcttcatac atcaagcgca atttgccggg
     1621 cttgttgggt tcgcgagcat cccagggata cataaaaacg ccaccacgca tcatgatgcg
     1681 atgcacgtca gccaccatcg aggcgatcca acgcatgttg aagtctttgt cgcgtgggcc
     1741 agtcttgcct gccagaagct catcgacgta gcgtttcatg ggcgcgtccc aatgacgggc
     1801 attggacatg ttgatggcaa actctttggt atcttcaggc acctgtattt cattgtgcgt
     1861 aagcacccat gagcccattt cgcgatcgag cgtgaatcca accacgcctt caccaacggt
     1921 gagcaccagc atggtttgag ggccgtagac agcgtaacct gcagccactt gcgtataacc
     1981 cgcttgcaag aaatcctctt cagcaatatc gcgaccagag gcaccgggcg gggcctgcaa
     2041 gacagagaag atcgtgccga ttgagacatt gacatcaatg ttcgatgagc catcaagtgg
     2101 atcaaacaac agcaggtact cacctttggg gtagcgatgg ggaatcaggt ggatggtttc
     2161 catctcttca gacgccatgg cggccaaatg gccaccccat tcgttcgctt cgagcagtac
     2221 ttcgtttgaa atgacatcga gttttttctg gacttcgcct tggacattct cttgtgccaa
     2281 gctgccaagt acaccgccga gtgcaccttt gctaacggaa tggctgatgg tcttgcaggc
     2341 gcgtgaaacg atctcgatca gtaggcgcag ctccgctggc aaggctttgt cgttgcgttg
     2401 cttttctaca agatactgcg tcagtgatgt gcgtttttta gacatattgg gctcgtaggg
     2461 ctctagtagg taaaggagtt agagtgggaa tcaaagtgtc agggctttcg tgacaatctc
     2521 acgcgtattg cctgacagat cagacgcatc agccacgcgc tgcaaagcgt cgcgcatgcg
     2581 tgttttagcc ggttcagcat gatgcgtcca atggtcgagt gtgcgtgcca ggcgcgcagc
     2641 gacttcgggg ttggcttgat cgatacggat gacgtgctcg gcccaaaact catagccact
     2701 gccatcggcc acatggaaac caatcggatt gtttatacaa aactgaaata ccagcgcgcg
     2761 caggcgattg gggttgcggt atacaaacgc agggtgttcg ataagggttt gaacctgtgc
     2821 caccgtcgta gtcggggcgc aagcctgaat ggcaaaccac ttgtcaatga ccagcggatc
     2881 gttctggaag cgatcataaa agtcggacaa ggcttggtcg accgacgcgt cgcgctcagg
     2941 atgccaaatg agtgcgcgca gtgcaccaag acggtctgtc atgttgtgcg cttgggcgta
     3001 ctgagtggcg gccagtgatt tgctatcgta tttgctaccg cgtttgtcat ctaccgtgcc
     3061 tgccagacaa agc
//
LOCUS       DATBNL010000273         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_53138, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000273 DATBNL010000000
VERSION     DATBNL010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53138"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VIC30_04620"
     CDS             <1..250
                     /locus_tag="VIC30_04620"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020206905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY7803702.1"
                     /translation="QPQAACCAPRWKVNRDFTLDVESTMDPAVVEGLKAMGHVLKSVE
                     DPYMDFGSGQFIWRLSDNLEDGYVAASDSRRDGQAVGF"
     gene            complement(299..1573)
                     /locus_tag="VIC30_04625"
     CDS             complement(299..1573)
                     /locus_tag="VIC30_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803703.1"
                     /translation="MTLDLSQTSQRNARVLTAAQALGGAGPPIIVSLGGLVGQQLASD
                     PALITLPVSIFNLGLAIGTLPAAWVMKQYGRRFGYLFGAVLGIISGLVAAFGIYQQLF
                     MMFCLGTMIAGFYASYVQSYRFAVADGAPEDIKPRLISWVMVGGLFAAIIGPQTVIWT
                     RDIVPWAPFAGSFVAQALLAALAIPVIWQLRSVSKSGKQLARDAKRDAKQNAAQGHAT
                     TTASTSTQTKTLPTRTLKEIASQPRFILAVTAGVVSYGLMTFVMTAAPIAMVGCGHTV
                     GQAALGIQWHVLAMFAPSFFTGRLIQRFGVKTITALGLLILAASGAVGLSGLGLEHFW
                     IALVLLGVGWNFGFIGATTMVTSCHRPDEKTRVQAMNDFLVFGSVAISSFASGKLLSV
                     AGWEMLNWMIFPGVALVLLMMVWESRKPAVAF"
     gene            complement(1570..>1792)
                     /locus_tag="VIC30_04630"
     CDS             complement(1570..>1792)
                     /locus_tag="VIC30_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010926548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803704.1"
                     /translation="VAAKQLNTTTPGILCGWQPPAWARRSVFWREGEPLLVSECFLPA
                     FWVLTDKTSRQKHQACELLTPLQVVNMPA"
BASE COUNT          450 a          492 c          486 g          364 t
ORIGIN      
        1 acagccacaa gcggcttgtt gcgcaccacg ctggaaggtc aaccgggatt ttacgcttga
       61 tgtggagtcg accatggatc ccgctgtggt tgaaggtctg aaagccatgg ggcatgtact
      121 gaagtcagtt gaagaccctt acatggattt cgggtctggg cagtttatct ggcgcctgtc
      181 agacaacctt gaagacggct atgtggctgc gagcgacagc cggcgtgatg gacaagcggt
      241 gggcttctga cggtagcctt ctgatttagc gatagtgttc ggttcagagc ggcttggttc
      301 aaaacgcgac cgcgggcttg cgactctccc acaccatcat cagcagtacc agcgcgacac
      361 ccgggaatat catccagttc agcatctccc aaccggccac tgacagcagc ttgccagagg
      421 caaatgagga gatggccact gagccaaaca ccagaaagtc gttcatggct tgaacgcggg
      481 ttttctcgtc agggcgatgg cagcttgtga ccatggtggt cgcaccaata aatccgaagt
      541 tccaccccac acccaacaac accaaggcaa tccagaagtg ttcaagccca agacctgata
      601 aaccaactgc accagaggct gctaggatga gtagacccaa agcagtaatg gttttaacgc
      661 caaaacgttg aatcaatctg cctgtaaaaa agctcggtgc aaacatggcc aacacgtgcc
      721 attgaatgcc caatgccgct tggccaacgg tatgaccaca gccgaccatg gcaatgggtg
      781 ctgccgtcat gacaaaggtc atgagcccat aagacaccac gccagcggtg acggccagaa
      841 taaatcgtgg ctgagaggcg atttctttta gtgttcgggt gggcagggtc ttggtctgag
      901 tgcttgtgct ggctgtagtt gttgcgtggc cttgcgccgc gttttgcttc gcgtctcgct
      961 tcgcatctct ggcaagctgt ttgcccgact tgctcaccga acgcagttgc caaatcacag
     1021 ggatggccaa tgctgccaga agagcctgtg ccacaaaact gcctgcaaaa ggtgcccacg
     1081 gcacaatatc gcgggtccaa ataaccgttt gcgggccaat gatggcggca aacagccccc
     1141 cgaccataac ccaggatatc aggcgcggct tgatgtcctc aggcgcacca tctgccaccg
     1201 caaagcggta gctttgcacg taagaggcgt aaaagccggc aatcatggtg cctaagcaaa
     1261 acatcataaa cagctgttga taaataccga atgcggccac gagcccagaa ataataccta
     1321 gcactgcgcc aaacagataa ccaaagcggc gaccatactg cttcatgacc caagccgccg
     1381 gcagcgtgcc gatagccaga ccaagattaa agatactcac tggcaacgta atgagcgccg
     1441 gatcgcttgc cagctgttgg cccacgagcc cgccaagcga gacgatgata ggaggtcctg
     1501 caccaccaag tgcttgagca gccgttaaga cacgtgcatt gcgctgtgac gtttgtgaga
     1561 gatcgagagt catgcgggca tattaaccac ttgcagcggt gttaacagct cgcatgcttg
     1621 atgtttttgt cttgatgttt tgtcagtcaa tacccaaaag gccggtaaga aacattctga
     1681 gaccaataaa ggctcgcctt cgcgccaaaa cacagatcgc ctagcccagg ctggcggctg
     1741 ccagccgcac aggatgcccg gtgtggtggt gtttaactgt ttagccgcaa cc
//
LOCUS       DATBNL010000274         2619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_23012, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000274 DATBNL010000000
VERSION     DATBNL010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23012"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2619
                     /locus_tag="VIC30_04635"
     CDS             <1..>2619
                     /locus_tag="VIC30_04635"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HEY7803705.1"
                     /translation="CLDDVIVVARRAPEGTIFVGGFDVSADDDDTSFWQSGTMRWLLA
                     QGRLNIQNSRLVWVDQQDKSVPLVFNDIDITADNGLFGHQLDVRVTLPESVGGELEAV
                     AHIDSVMGSLSRFLVSEPDGYIYASVSELFPQQLAPWVDVSAVQGSFGARVWLDIQRG
                     KFTNFSAAVSGRDAAFNAANANNSVVQTQTGDATEALTERHTADGVTLEQFRWQANGP
                     LAMLGADVAYPDMVQSLGALQRVSSSLTVANGTFRMASSGMQPIKANQLSAQVAVSRG
                     ASNGLKVDVQDLALANDDALVTAQGSWAIDEASAAKSGELDINGTLARFELSSLYRYM
                     PDAVAADARQWMASAFESGSVPRATFQIKGAVRDFPYGASDEPGTFRVDGNVQDVSIN
                     YANKDGADGLPWPLLTNLIGKLELINDRIGLDVSAGALTLPKGQLITLSDLSAQLVDL
                     GNKPVLTINGHTQAQAENYLALFDDTALKDIAPAFVREFKGKGDWEMPLTLRVPLDEL
                     EQTEFQGELAFNGGAVVYANSPTLSNVQGGAILSGKGFEANEISANVLGGEVKISGGI
                     NETLDTIEATGKLTWAEVGKFTSSRELGRLITGDMSYAVNAKVTDKSFEVTMDSDLAG
                     TGIALPTPLGLSAGQTAKTNFSWAGSLKEKKPDTWRVTIANRLSMTARSGSNSQTFFD
                     DMQLAIGAAKPLTGPGLTVAADLPSVDLDQWIPVVDTMRAEPNDAARQTEATTMPVLT
                     QASLLSKKVLMGDNHLDEVNAKLTVKNARQYHLNLASTQTNGEVNWAMDRGKLQDGFH
                     VRLDHLNIGNRQSGDQTNKQRDNEVKKANLPEPGKVSALPMLDIKVDDLSIYGARIGT
                     FQIKGRNTADNKQWQIS"
BASE COUNT          635 a          610 c          745 g          629 t
ORIGIN      
        1 tgccttgacg atgtcattgt cgttgccagg cgtgcacccg aggggactat ttttgtaggc
       61 gggtttgatg tcagtgccga tgatgatgac accagctttt ggcaatcggg gaccatgcgc
      121 tggttgttgg cgcaaggccg cttgaacata caaaactcgc gcttagtttg ggttgaccag
      181 caagataagt cagtgccttt ggtctttaat gacatcgaca taacggctga taacggactg
      241 ttcggtcatc agcttgacgt tcgcgtaacg ctgcccgaga gtgttggcgg cgagctcgag
      301 gcagtcgccc acatcgattc ggtaatgggc tccttgtcgc ggttcttggt cagtgagcca
      361 gacggctaca tctacgcttc tgtgagcgaa ttgtttcctc agcagcttgc accatgggtg
      421 gatgtgtctg cggtacaggg tagctttggc gcacgggtct ggctcgacat ccagcgtggt
      481 aagttcacga acttttctgc cgcggtttca ggtcgagatg cggcgtttaa tgcagctaac
      541 gccaacaaca gcgtagtcca aacccaaact ggggacgcga ctgaagccct aactgaacgt
      601 cataccgctg acggtgtgac gcttgagcaa tttagatggc aggccaatgg tccactggcc
      661 atgctaggtg ccgatgtggc ctatccagac atggtgcagt cattgggtgc gttgcagcgt
      721 gtgagcagta gtttgaccgt agccaacggc acattccgga tggcatcttc tgggatgcag
      781 ccgattaagg caaaccagct tagtgcccaa gtcgccgtta gtcgtggcgc atccaacggt
      841 ttgaaagttg acgtgcaaga cttggcattg gccaatgatg atgctttggt gaccgcgcaa
      901 ggctcttggg cgatcgatga ggcaagtgct gctaagtctg gtgaacttga catcaatggg
      961 acactagcgc gctttgagct ctcaagtctg taccgttaca tgcctgacgc tgttgctgct
     1021 gatgcccgac agtggatggc cagtgccttt gaatctggtt cggtacctcg ggcgactttc
     1081 cagatcaaag gggctgttcg agactttcct tatggcgcaa gcgacgaacc tggtacgttt
     1141 cgggtcgatg gtaacgtgca ggacgtgagc attaactatg ccaacaagga tggtgccgat
     1201 ggtttgcctt ggccgctgtt gaccaatttg atcggcaagc ttgaactgat caatgaccga
     1261 attgggttgg atgtctcagc tggggcattg accttaccta aaggtcagct tattacctta
     1321 agcgatttgt ctgcacagtt ggtcgatctt ggaaacaagc cagtgctgac catcaatggt
     1381 catactcagg cgcaagctga aaactacctg gcgttattcg atgacaccgc actcaaagac
     1441 attgcgccgg catttgtgcg tgaatttaag ggtaagggtg attgggaaat gcctttgacc
     1501 ttacgagtgc cacttgatga gcttgagcaa accgagtttc agggtgagtt ggcatttaac
     1561 ggtggtgcag tggtttacgc gaatagcccg acattgagca atgtgcaggg tggtgcaatt
     1621 ttaagtggca aagggtttga agccaacgag atatctgcca atgtactggg tggtgaggtt
     1681 aagatcagcg ggggtatcaa tgagaccctt gatacgatcg aggcgacagg taaactaact
     1741 tgggctgaag ttggcaaatt tacctcgagt cgtgagttgg ggcgtctgat taccggtgat
     1801 atgtcgtatg ccgtgaatgc caaggtgacc gataagtcat tcgaagtcac catggattcc
     1861 gatttggccg ggacaggaat tgcattgccg acacctctag gcctgtcggc tggtcagact
     1921 gcaaaaacca atttcagctg ggctggcagt ctgaaagaaa aaaaacctga cacttggcgc
     1981 gtaaccatcg ccaatcggtt gtccatgact gctcgcagcg ggtccaattc ccagaccttc
     2041 ttcgatgata tgcaattggc catcggcgca gcaaaaccct tgactggacc aggtctgaca
     2101 gttgcagccg acttgcctag cgtcgatctc gatcaatgga ttcctgtggt tgacactatg
     2161 cgagctgaac cgaacgatgc agcaagacag actgaggcca cgacaatgcc ggtattgacc
     2221 caggccagtc tgctatcaaa gaaagtcctc atgggtgaca atcaccttga tgaggtgaat
     2281 gcaaaattga cggtcaaaaa cgcgcgacag taccacttga acttagcctc gacacaaacc
     2341 aacggtgagg tcaattgggc aatggatcgc ggcaaactgc aagatgggtt tcatgttcgc
     2401 ctagatcatc tcaatattgg taaccgccaa agcggtgatc aaacgaataa gcaacgagat
     2461 aatgaagtca aaaaagcgaa tcttccagag ccgggcaagg tctctgcgtt gccgatgctg
     2521 gatatcaaag tagatgatct gtctatatat ggtgcccgaa tagggacgtt ccaaattaaa
     2581 ggccgcaaca cagcagacaa caagcaatgg cagattagc
//
LOCUS       DATBNL010000275         5086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_23016, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000275 DATBNL010000000
VERSION     DATBNL010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23016"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VIC30_04640"
     CDS             complement(<1..635)
                     /locus_tag="VIC30_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44 domain-containing protein"
                     /protein_id="HEY7803706.1"
                     /translation="MMKAFQGRWLAALMIGLSGFALMAVSFDSEARRFGGGFSSGRQS
                     VNVMQQKQAVKPPAATAPRAAGTAGGAATTGSRWLGPLAGIAAGLGLAAMLAHFGFAG
                     AMADLLVIALFAAIAIFGIRFIMRTLRSGLSPEALGNTSAGMQRRQYGRDSTEGPGQP
                     EVQPPMSGLFGPGPMHVESPAPIVGDWFIPADFDTATFLEEAKRQFVAIQKA"
     gene            complement(831..1571)
                     /gene="ubiE"
                     /locus_tag="VIC30_04645"
     CDS             complement(831..1571)
                     /gene="ubiE"
                     /locus_tag="VIC30_04645"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEY7803707.1"
                     /translation="MTEKNIDFGFTQVPESEKARKVADVFDSVATRYDVMNDLMSGGL
                     HRLWKRFALSRVAARPGMRVLDIAGGTGDLAKSMANDVGPLGQVWLTDINGSMLKVGR
                     DRMLDAGLVLPCAVCDAEALPFESGYFDRVTVAFGLRNMTHKDAALAEMARVLRPGGK
                     LVVLEFSKVTDALAPAYDWYSFNVLPWLGRQVAKDEDSYRYLAESIRMHPDQETLKSM
                     MQQAGMNRVQYFNLSAGIVAVHEGVRTI"
     gene            1770..2468
                     /gene="phoB"
                     /locus_tag="VIC30_04650"
     CDS             1770..2468
                     /gene="phoB"
                     /locus_tag="VIC30_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018025880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEY7803708.1"
                     /translation="MSSTILVVEDEPAIQELIAVNLSFAGHKVLRAFDSEQAETLINA
                     ELPDLILLDWMLPGQSGLALARKLRNSERTRQVPIIMLTAKGAEQDKIDGLESGADDY
                     ITKPFSPKELMARIKAVLRRRAPQLTDDLTEVAGLKLDPSAHRLTGNGQTLAIGPTEF
                     RLLHFFMTHPERVFSRSQLLDQVWGDHVFVEERTVDVHIRRLRKALEPTGHDNHIETV
                     RGTGYRFTRQTPGA"
     gene            2465..3823
                     /gene="phoR"
                     /locus_tag="VIC30_04655"
     CDS             2465..3823
                     /gene="phoR"
                     /locus_tag="VIC30_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HEY7803709.1"
                     /translation="MKALAVPVSDWPRATMRLMQWRKTLWWFVVSLGLAITLQVVWAS
                     ALGWIAMALGFGALTTWRRYQAARVASWLKAAPAQPPPENVGPWTDVVRHLEHNLQLQ
                     SELLLQAQETSDAVMAAAQALPVGVIALDSSMSIIWFNKSARQQLGLDEQVDLGVNLL
                     HLIREPEFVRYARQRTWPDPLILKTLQGQQEKLLMMQFVIYAREQRLLITRDLTQIDK
                     LETTRRDFVANVSHELRTPLTVLAGFVETISEAPTGALSDDQVQQYFGLMREQANRMQ
                     SIVSDLLTLSNLETSPVAEQEVVNVADMLRTVRQQIEALSAGKHAFEWDIEAGLDLLG
                     APSELTSAFSNLLTNAVRYTPDGGLISVRWAKEDEQGARFSVKDTGIGIAAEHIPRLS
                     ERFYRVDRSRSRAAGGTGLGLAITKHIAMRHEADFQIESRLKQGSTFSLVFPENRLSR
                     AT"
     gene            3904..4335
                     /locus_tag="VIC30_04660"
     CDS             3904..4335
                     /locus_tag="VIC30_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY7803710.1"
                     /translation="MMAETTMPPFHLAFPVRDLSEARQFYGDLLGCAEGRSSEDWIDF
                     NFYGHQIVAHLAPQECGAMSTSNVDNHQVPVRHFGAVLSMPAWETLADKLKQAGTAFI
                     IEPYVRFKGEVGEQATMFFQDPSGNAIEIKSFKNMEALFAK"
     gene            4353..5075
                     /gene="pxpB"
                     /locus_tag="VIC30_04665"
     CDS             4353..5075
                     /gene="pxpB"
                     /locus_tag="VIC30_04665"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEY7803711.1"
                     /translation="MSTELIKRIRAQGDRCLLVDLGDQIDEQVGLRCLRLAECLRQAA
                     VPGVLDIVASFTAVAIYYQPGRELGDEPIARLTELVNDIAQEIVQGNVELNSRRIEIP
                     VCYGGEHGPDLDDVAHRMGMSPDEVVHAHHANASRVYMIGFAPGHPYIGIHDERFNLP
                     RREVPRTALPAGSLGIANRQSTIYPNVLPGGWHIIGATPLKLFNATAAEPTLLAPGDE
                     IAFIPIDASEFDTIKAQQAASA"
BASE COUNT         1177 a         1482 c         1310 g         1117 t
ORIGIN      
        1 gctttctgga tggcaacaaa ttgacgtttg gcctcctcaa gaaacgtcgc cgtatcaaaa
       61 tcagctggga taaaccaatc gccaacgatc ggagccggtg actcaacatg cattgggccc
      121 ggcccaaaca accctgacat gggtggctgg acctccggtt gccccggacc ttcagtgctg
      181 tcacgaccat attgtcggcg ttgcatgcct gccgaggtgt tgcccaaggc ttcagggctt
      241 aaaccagagc gcaaggtgcg catgatgaag cggataccga atatcgcgat cgctgcaaac
      301 aaggcgatca ccagcaaatc tgccatcgcg cctgcaaaac caaaatgcgc cagcatcgcg
      361 gccaaaccta gacccgcggc aatgcccgcc aacggcccca gccaacgaga ccccgtggtc
      421 gctgcaccac ctgctgtgcc cgcggcccgc ggtgcggttg ccgccggcgg tttaaccgcc
      481 tgcttttgtt gcatgacatt gaccgactga cggccgctgc taaagccacc cccaaaacgg
      541 cgcgcctcgg aatcaaacga cactgccatc agcgcaaaac cgcttagtcc gatcatgagc
      601 gccgcgagcc accgcccttg aaatgccttc atcatatttc gtcccctgcc tttgtaactt
      661 tcacttaaca gcacccgacc caatgtccgg acggtgtgtc tcagtggtct gaatatatct
      721 tgcagaataa gaggtgcgcc attactcaca ctgcgcgcta gggtattggt ctgaggtggg
      781 tttgcctgag tttgcctgaa cttggcttag cctagcctca cgcacaacca ttaaatcgtg
      841 cgcacgccct catgcaccgc aacaatgcca gcgctcaggt tgaaatattg cacccggttc
      901 atgcccgctt gctgcatcat ggatttcaat gtttcctgat cggggtgcat gcggatggat
      961 tcggccaaat agcggtaact gtcctcatcc ttggccacct gccgaccgag ccacggcagc
     1021 acattaaacg agtaccaatc gtaggctggt gccaacgcgt cagtcacctt agaaaactca
     1081 agcaccacca acttgccacc aggccttaag acgcgggcca tttccgctaa agcggcgtct
     1141 ttatgtgtca tattgcgcaa accaaaagcc acggtcaccc gatcaaaata ccccgactca
     1201 aatggcaacg cttcggcgtc acacaccgca caaggcaata ccagaccggc atctagcata
     1261 cgatcacggc cgactttgag catggagccg ttaatgtcgg ttaaccaaac ttggccaagc
     1321 gggccgacat cgttggccat ggatttagcc aaatcgcccg taccaccggc gatatcaagc
     1381 acccgcatcc cgggcctagc cgccacacgc gacaaggcaa accgcttcca cagccgatgc
     1441 aagccgcctg acattaaatc gttcatcacg tcgtagcgcg tggccaccga atcgaatacg
     1501 tctgcgactt tgcgcgcttt ttctgattcg gggacctgcg taaagccaaa atcgatgttt
     1561 ttttctgtca tggtcgacgc tgttgttgtg tttaaaaggc cagctgatgc actgatactt
     1621 aaaaaataac cgctttcaag tctaaatgtt agcctaagca tgcttgatat ctaggtagtt
     1681 tgatatcaac tgtcatagac ttgacatatt aaggacatag cattgcgatt catgaacagt
     1741 catctggcgt gtcccataag cgagtcacca tgtctagcac tatcttagtt gttgaagatg
     1801 aacctgcaat ccaagagttg attgcagtga acttatcctt tgcaggccat aaggtccttc
     1861 gagccttcga cagcgaacaa gctgaaacct tgatcaatgc tgaattgcca gacctgatct
     1921 tgctagattg gatgctaccc ggacaatccg gactggcact agcgcgcaag ctcagaaaca
     1981 gcgaacgcac ccgacaggtt ccgatcatca tgttaacggc caagggcgct gagcaagaca
     2041 aaatcgatgg gctggagtca ggtgccgatg attacatcac caaacccttc tcgcccaaag
     2101 agctaatggc gcgcattaaa gctgttctca gacgccgcgc cccacagctc accgatgacc
     2161 tcacggaggt cgcaggcttg aaactcgacc catcggcaca tcgtctgacc ggcaatgggc
     2221 aaactctggc cattggtccg accgagtttc gcttgctgca cttttttatg acccaccccg
     2281 aacgggtgtt ctctcgctcg cagctgctag atcaggtctg gggtgaccat gtgtttgtcg
     2341 aagagcgcac cgtagatgtg cacattcgcc gcctgcgcaa agcccttgaa ccgaccggac
     2401 acgacaacca tatcgagacg gtgcgtggaa ccggctaccg ctttacccga caaacacccg
     2461 gggcatgaag gcacttgcgg tgcctgtttc ggactggccc cgtgcgacaa tgcgcctcat
     2521 gcagtggcgt aaaacactct ggtggtttgt tgttagccta ggccttgcca ttacgttgca
     2581 agtcgtctgg gcgtctgcat tgggctggat tgccatggca ctggggtttg gtgcgcttac
     2641 cacttggcgc cgatatcagg ccgcccgggt ggccagttgg ctcaaagccg cgccggctca
     2701 gccaccacct gagaatgtcg gtccctggac ggatgttgtt cggcacctcg agcacaactt
     2761 acaacttcaa agcgagttgc ttttacaagc gcaggaaacc agcgatgcgg tcatggctgc
     2821 agctcaagca ctgcccgtcg gtgtcatcgc gctagattcg tccatgtcga tcatttggtt
     2881 taacaagtcc gcgcgccaac agcttggtct tgatgagcag gtcgacctcg gtgtaaacct
     2941 gttgcatcta atacgggaac cagaatttgt tcgttatgcg cgccagcgta catggccaga
     3001 ccctctgatt ctaaaaacct tgcaaggcca acaagaaaaa ctgttgatga tgcagtttgt
     3061 catttacgca cgcgagcagc gcctgttaat tacccgtgac ctgacgcaaa ttgacaagct
     3121 agagacaacc cgacgcgact ttgtagccaa cgtctcgcat gagctgcgca cacccctgac
     3181 ggtgttggca gggtttgttg aaaccatcag cgaagcgcca acgggcgcac taagcgatga
     3241 tcaggtgcag caatactttg ggctcatgcg cgaacaagcc aaccgcatgc agtccatcgt
     3301 ctcggatttg ctcacgctgt cgaaccttga aacatcaccc gtggccgaac aagaagtggt
     3361 caatgtcgcg gacatgcttc gaaccgtgcg ccaacaaatt gaggcgctat cggcaggtaa
     3421 acatgcattt gaatgggaca tcgaggccgg ccttgacctg ctcggggcgc cctctgaact
     3481 gacctccgcg tttagcaacc tgctaaccaa cgcggttcgc tacaccccag acggtgggct
     3541 tatctcagtt cgctgggcca aagaggacga acagggcgcg cgatttagcg ttaaagacac
     3601 cggcatcggg attgctgctg aacacatccc caggctaagc gagcggtttt atcgagttga
     3661 ccgcagtcgc tcgagggctg ccggtggcac aggcctagga ttagccatca ccaaacacat
     3721 tgccatgcgc cacgaagcgg acttccagat tgagagtcga ctcaaacaag gcagtacctt
     3781 tagtctcgtc tttcctgaga accgcttaag tcgcgcaacc tgatatcctc ttacctatgt
     3841 agcgaattag ttaccaatgc ggtcgctttc cgcgattgca cccgtttatt ttggagttcg
     3901 agcatcatgg ctgagaccac catgccccca tttcatttgg cattccctgt acgggatttg
     3961 tctgaagccc gacagtttta cggtgattta ctcggttgcg ccgagggccg cagctctgag
     4021 gactggattg atttcaattt ctacggccat caaatcgtgg ctcacttggc tccgcaagag
     4081 tgtggtgcca tgtcaacaag taacgtcgac aaccaccaag ttccagtgcg ccatttcggt
     4141 gccgtgctct cgatgcctgc ctgggagaca ctggccgaca aactaaagca agctggcacc
     4201 gcgtttatta tcgagcccta tgttcgcttt aaaggcgagg ttggtgagca agccaccatg
     4261 ttctttcaag acccctctgg caacgccatt gagatcaaat cgtttaagaa catggaggcg
     4321 ttgttcgcca agtaagccca aggcttcatg acatgtccac tgaactcatc aagcgcattc
     4381 gtgcgcaagg cgatcgttgc ctgctcgttg acctgggtga ccagattgat gagcaggtgg
     4441 gtttgcgttg cctcaggtta gccgagtgct tgcgacaagc cgccgtacca ggtgttttgg
     4501 acattgtggc gtcgtttacg gccgtggcca tttactacca accgggtcgc gaactcggtg
     4561 acgaacccat cgctcgtttg accgagctgg tcaatgacat cgcccaagaa atcgtgcaag
     4621 gtaatgttga actcaactcg cggcgcatcg agattccggt ttgctatggc ggcgagcatg
     4681 ggccagatct tgacgacgtg gctcaccgca tgggcatgtc gccagacgag gtggtgcacg
     4741 ctcaccacgc gaatgctagc cgggtttata tgattggctt cgcacctggc cacccctaca
     4801 tcggcatcca cgacgagcgc tttaacctgc cacgccggga agtgccacgt acggcgctac
     4861 ccgcagggtc ccttggcatt gccaatcgac aaagcaccat ctaccccaat gtgttgcccg
     4921 gtggctggca tatcattggt gccacaccgc tgaagctctt taacgccacg gccgccgagc
     4981 ccacactgct tgcgcctggc gatgaaattg catttatacc gatcgatgct agcgagtttg
     5041 acacgatcaa agcccaacag gcagcaagcg catgagtatg ctagta
//
LOCUS       DATBNL010000276         2788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_172311, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000276 DATBNL010000000
VERSION     DATBNL010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172311"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..136
                     /locus_tag="VIC30_04670"
     CDS             <1..136
                     /locus_tag="VIC30_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016451120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY7803712.1"
                     /translation="QASRFEIYPEAPHAFHADYRASYREAAAKDGWQKCLAWFAEKGV
                     "
     gene            423..752
                     /locus_tag="VIC30_04675"
     CDS             423..752
                     /locus_tag="VIC30_04675"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7803713.1"
                     /translation="MKTLKSLSLIGASALLSIGASTNALADELMAERIYNQSLAATCA
                     SCHGTNGVSVAGQDMPKIDELTHEQIAELLRQYKSGGKSGTIMPQIAKGYTEEQIDII
                     AQVLGHD"
     gene            771..2048
                     /locus_tag="VIC30_04680"
     CDS             771..2048
                     /locus_tag="VIC30_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011616200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY7803714.1"
                     /translation="MNRRLFLGQSAALLGTTAGINKLALASAPNKAQVVIVGAGYGGA
                     TAAKYIRLLSNNSISVTLIEPNENFISCPLSNLVVGGEEKISALTTSYDGLTDKHGIN
                     MVKDMVSKIDTQKKTVTTAGGNSIAYDKLVLSPGINMYMDSIEGLAQANADGVTLQAW
                     KAGPETVALHKQIADMPDGGVVALSIPLAPYRCPPGPYERTCQIANYLKNNKPKSKLV
                     VFDSNANIVSKGGLFSKAWADLYEGYIDYRPDNKVVAVDGKTRTLKFEFSDDFKADVL
                     NVIPTMGAGNIVVDTGLANMNNRWAEVDFLNFESTQAKDVHIVGDSIQVAPRMPKSGH
                     MANQQAKVAAAAIVSELNDFPINPQPVVTNTCYSFVNDRDVVHVASVHQYDPKEKTFL
                     PVKGAGGLSPEPNRIEGIYAWGWAKNIWNDTVG"
     gene            complement(2134..2709)
                     /locus_tag="VIC30_04685"
     CDS             complement(2134..2709)
                     /locus_tag="VIC30_04685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803715.1"
                     /translation="MSSNHAYGPCPPSLLAQVLLVASVWVLLYVVNDWLFDQVAISAY
                     ASWVFLPAALRMLAVLLCGWVGVVGLFVGSFITGVYTHGLLDPGMLMVLAGLSALSPM
                     VAFLICTRWFGWRSDLHGLSATQLVVLSLLVSLCGAGLHNMHLLAIGAIDSIGQTFVT
                     MFVGDMVGTFAVLYTAKFLIGLVPFNKQAAG"
BASE COUNT          804 a          746 c          670 g          568 t
ORIGIN      
        1 acaagcctcc cgctttgaaa tctatcctga ggcgccgcac gcctttcatg ctgactatcg
       61 cgcaagctat cgcgaagcgg cagccaaaga cggttggcaa aaatgtttgg cctggtttgc
      121 agaaaaaggg gtttaaaaag catttaagtc gacccttctc atacctctta cacaccacgc
      181 aagagaaatt taattcaacc gcagcgaatt ggaaaaagga tttaacaagg cgcttcacta
      241 aactaccaat aaaaaagccg ggagaaaaag ccgagagctg cacgcctcgg cttttagatt
      301 aggttttgca ttagcgtaaa aaccaattga cttcaaaaac aaaaacacta tcatttgcga
      361 taaatcaata aatatatata tatccaacag caataagctt ttaagcagag gaggcaggtc
      421 gcatgaaaac tttgaaatca ctgagtctga taggagcgag cgcgttgcta tcaattggtg
      481 catcgacaaa cgcgttagcc gatgagttga tggcagaacg catttataac caaagcctcg
      541 cagccacctg tgcaagctgc cacggcacca atggcgtgag cgttgcaggc caagacatgc
      601 ccaagatcga tgagttgacg cacgaacaga ttgccgaact tttgcgccaa tacaagtctg
      661 gaggaaaaag cggcacgatt atgcctcaga ttgcaaaagg ctataccgag gaacaaattg
      721 acatcatcgc ccaagtactg ggtcacgact aaaaatcaaa ggagacactc atgaatcgtc
      781 gcttgtttct cgggcaaagc gctgcgctat taggcaccac tgccggcatc aataaactgg
      841 cactcgcgag cgcccccaac aaagcgcagg ttgtcatcgt gggcgcaggc tacggtggcg
      901 ccaccgcagc caaatacatt cgcctgctgt caaacaactc cattagcgtg actttgattg
      961 agccgaatga gaacttcatt tcttgcccac tttcaaacct tgtggttggt ggtgaagaaa
     1021 aaatcagtgc actgaccact tcctatgacg gcctgacgga taagcatggc atcaatatgg
     1081 tcaaggatat ggtcagcaag attgataccc agaaaaaaac ggtcaccacg gcgggtggaa
     1141 acagcatcgc ctacgacaaa ctggtgcttt caccaggcat caacatgtac atggactcga
     1201 tcgaaggttt ggcccaagcc aacgccgatg gtgtgacctt gcaagcctgg aaggcaggcc
     1261 ctgaaacggt tgcgctacac aagcaaatcg ccgacatgcc cgacggcggt gtggtggcct
     1321 tgagcattcc gcttgcgccc taccgctgcc cacccggccc gtatgagcgc acttgccaga
     1381 tcgccaatta cttgaagaac aataagccta agtccaaact cgtggtgttt gattcaaacg
     1441 ccaacattgt ctccaaaggc ggcttgttca gcaaagcgtg ggcagacctc tatgaaggct
     1501 acatcgacta ccggccagac aacaaagtgg tggcggtcga cggcaaaacc cgcaccttga
     1561 agtttgagtt ctctgatgat ttcaaagccg atgtgctcaa cgtcatcccc accatgggcg
     1621 cgggcaacat cgtggtcgat accggcttgg cgaatatgaa caaccgctgg gcagaagttg
     1681 acttcttgaa tttcgagtcc acacaagcca aggatgtgca cattgtgggt gactccattc
     1741 aagtcgcacc acgcatgccc aaatccggtc acatggccaa ccagcaagcg aaagtggcag
     1801 ccgctgcgat tgtttcagaa ctcaatgatt ttccgatcaa tcctcaaccg gtggtgacca
     1861 acacctgcta cagctttgtg aacgaccgcg acgtggttca cgtagccagt gtgcaccagt
     1921 acgatccaaa ggaaaaaacc ttcctgcctg ttaaaggtgc aggtggattg tcgcctgagc
     1981 caaaccgcat cgaagggatt tatgcctggg gttgggctaa aaacatctgg aatgacacag
     2041 tgggttaatc gctaagttcc agtaaacaaa agcgccacca ttaggtggcg tttttgtttg
     2101 gtgctgagtt ctctaacccg ctgcctgttt actctaacct gctgcctgtt tattaaacgg
     2161 cacaagcccg ataagaaatt tggcggtgta taaaaccgcg aatgtaccga ccatatcacc
     2221 aacaaacatg gtcacaaatg tctgcccgat gctgtcaatc gcaccgatgg ccaatagatg
     2281 catgttgtgc aagcccgcgc cgcacaacga caccaataga ctcaagacca cgagctgtgt
     2341 agcacttaag ccatgcaaat ccgagcgcca accgaaccac cgcgtacata ttaaaaaagc
     2401 caccatgggt gacaacgcgg acaaacccgc tagcaccatt agcatgccgg gatcgagcag
     2461 tccgtgtgta taaacaccgg ttatgaaact gccaacgaac aaacccacta cgcccaccca
     2521 gccgcacagg agcacggcca acatgcgcaa agctgccggc aaaaaaaccc aggatgcata
     2581 agcggatatg gcaacttggt cgaacaacca atcgtttacc acatacaaca gcacccaaac
     2641 gcttgcaaca agtaggactt gagccaacag cgatggcggg catggcccgt aagcgtggtt
     2701 tgacgacatg agtcgagacc tcaggcttgc tgggcctcgt ttaaacaccg cccaagcgca
     2761 ctgaaatact catcggtgcg ctctgtcg
//
LOCUS       DATBNL010000277         2662 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_172327, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000277 DATBNL010000000
VERSION     DATBNL010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172327"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VIC30_04690"
     CDS             complement(<1..449)
                     /locus_tag="VIC30_04690"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7803716.1"
                     /translation="MNYLNPGFLDQSTTLGWSFYGPVLLFVLLIALGVPVWVAIGAAS
                     IGLLLWSGVLPMSLFGGSLFEGIDAFALTAVPLFILTGDVLVRTGLSRKFMDIAEALT
                     NWTRSGFGSATVLVCGMFSAISGSDAAGAAAVGRMTINRLVESGYPRP"
     gene            complement(474..1007)
                     /locus_tag="VIC30_04695"
     CDS             complement(474..1007)
                     /locus_tag="VIC30_04695"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY7803717.1"
                     /translation="MTKPQHTSGWRASLDRNLERWALLVFYGMLVITMSVEVLRREVF
                     SYSSVWGEEIVRYSFIYLVWIGAAAAVRERAHIRIDVLFEFVSARVKAGLYLFGDLVT
                     LVVAGFAIYWSFDSLLISWKFGSVSHGLRISMVWFLAAVPIGMALLLYRLSQSIRRDI
                     SDIRHARPVYEGDRLFD"
     gene            complement(1025..2182)
                     /locus_tag="VIC30_04700"
     CDS             complement(1025..2182)
                     /locus_tag="VIC30_04700"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY7803718.1"
                     /translation="MTKIWTPDVTEEEKVTNRRQFLKVAGTSGFTVAALAAAGSSLYS
                     PAAVAQTRQEEEARQKAAKYTMTIASAYQLGASRSYPIMQLDFKENIQNATRGQVYVR
                     LAPAGQLGAGGALVKKVQEGTIQAAQHSLANFAPFAPEADMINLPYFCGANQKFVNLV
                     TSDAWKQQVHPKIEQRGFKALFYIVIDPRVVAIRKGGNAVTLPEDLDGIKFRVPGSKM
                     LQQYYRMVGANPTPVAWGETPSAIKQGVADALDPSTGALYVFGFKDILSHVTFTRAVP
                     DSQVYSCNLEWFNSLPKDVQEGIEFASEITSAQNLAKVPAARNYAMAELAKAGVEFKS
                     LTPDQLAIWEKTGGYQLDAWKPFRDELASPEVFSRLEQAANTQSRYYVHDA"
     gene            complement(2249..2485)
                     /locus_tag="VIC30_04705"
     CDS             complement(2249..2485)
                     /locus_tag="VIC30_04705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803719.1"
                     /translation="MTANTLQLVARLSLWGALLVFVVFFLNVFLAGPMGIKPFLTDLQ
                     EMLVLFFAVVLFTTGTLALEAKANLLNKNQTQGD"
BASE COUNT          664 a          729 c          695 g          574 t
ORIGIN      
        1 gggcggggat agccggattc aaccaaacga ttaatggtca tgcgaccgac tgccgcggca
       61 ccggctgcat cggatcccga gatggcgcta aacatgccgc agaccaagac agttgccgaa
      121 ccgaatccgc tgcgcgtcca attggtcagc gcctctgcaa tgtccatgaa cttacggctt
      181 aagccagtgc gcacgagcac gtcgcctgtc aggataaaga gaggaacggc tgttaaggca
      241 aaagcgtcaa tgccttcaaa cagtgagcca ccaaatagcg acatcggcaa tacgcccgac
      301 cacaacaaca acccgatcga tgccgcacca atggcgaccc agacgggcac accaagtgcg
      361 attaaaagca caaacagtag aacgggaccg taaaagctcc aaccaagcgt cgtgctctga
      421 tccaagaacc ctggattgag ataattcaac gtgatgctcc ttggcttgtc gtatcagtcg
      481 aacaagcgat cgccctcgta tactgggcgt gcgtgacgga tgtctgaaat atcgcgccga
      541 atcgactgag acaatcgata gagcagcaat gccatgccaa tgggaacggc cgcgagaaac
      601 cacaccatgg aaatacgcag gccatgagag actgagccga acttccagct aatcagtaag
      661 ctgtcaaatg accagtaaat ggcgaaccca gccactacca gagtgaccag gtcgccaaat
      721 agatacagac ctgctttgac tcgagccgat acaaattcga acaacacatc gatgcggatg
      781 tgcgcacgct cgcgcaccgc cgctgccgca ccgatccaga ccaggtagat aaaggagtaa
      841 cgcacgatct cctcacccca gaccgatgag tacgagaaaa cctcccgcct aagtacctca
      901 accgacatgg tgatcactag cattccgtaa aaaaccagta atgcccagcg ttccaggttc
      961 cggtctaagc tggctcgcca gcccgatgtg tgttgcggct ttgtcatggc tcaagtgccg
     1021 tccattaagc gtcgtgaacg tagtaacggc tttgtgtatt ggccgcctgt tcaagccgcg
     1081 agaacacctc cggtgaggcg agttcatcac ggaacggttt ccaagcatcc aactgatagc
     1141 cacccgtttt ttcccagatg gcaagttgat caggcgtgag cgacttgaac tcaacacctg
     1201 ccttggccag ttctgccatg gcatagttac gagctgcagg cactttggcc aggttctgag
     1261 ctgacgtgat ctcagacgca aattcaatgc cttcctgaac atccttgggc aaggagttaa
     1321 accactctag gttgcacgag tacacctggc tgtcaggtac agcacgggtg aaggtgacgt
     1381 gacttaagat gtctttgaag ccaaagacgt aaagtgcgcc agtcgatggg tcaagcgcat
     1441 ctgccacacc ttgtttgatg gccgacggcg tttcgcccca agccactggc gtagggttgg
     1501 caccaaccat acggtagtac tgctgcagca tttttgagcc aggtacacgg aatttgatgc
     1561 catcgagatc ttctggcagg gtcacggcat tgccgccctt gcgaattgcc accacgcgcg
     1621 gatcaatcac aatgtagaac aaggctttga aaccacgttg ctcaatcttt gggtgaacct
     1681 gctgcttcca tgcatcagaa gtcaccaagt tcacgaactt ctggtttgca ccacagaagt
     1741 acggcaagtt gatcatgtct gcttcgggtg cgaacggtgc aaagtttgcc agtgagtgtt
     1801 gtgcggcttg aatggtgcct tcttgcacct ttttcacgag cgcgccacca gcgccaagtt
     1861 ggccggctgg tgcgagacgc acgtagactt gtccgcgcgt agcattctgg atgttctctt
     1921 tgaaatccaa ttgcataatc ggatagctac gtgatgcacc taattgatag gcgctagcaa
     1981 tggtcatggt gtacttggcc gctttttggc gggcttcttc ttcctggcgg gtttgtgcta
     2041 ctgccgcagg tgagtacagt gaactgccgg cagcggccaa ggcagccacg gtaaatccgc
     2101 tggtgccagc aactttcaga aactggcgac gattcgtcac tttctcttct tcagtgacgt
     2161 cgggtgtcca aatcttggtc atgcttgtct cctcgtttgt ttggtcgcgc tcgcttcaaa
     2221 tggcgggctt gttgcaaccg aattgaccct aatccccctg ggtctggttt ttattcaaaa
     2281 ggttggcttt ggcctcgagg gccaaggtgc cggtagtaaa gagcacaact gcaaaaaaca
     2341 gcactaacat ttcttgtagg tcagttaaaa aaggcttgat gcccatagga cctgccagaa
     2401 aaacattcag aaaaaacacc acgaacacca acaacgcgcc ccaaagcgac aatcgcgcga
     2461 caagttgcag agtgtttgcg gtcatggtgt cttctccgtt acatccaatt aagcactttc
     2521 atataggcag gtaggcgtag aggccgaaga agactccggc ggtcgaggcg aacagaactc
     2581 cgaacaatgt gattcctctc tcttggtgga ctccgacgtc agccggcatc gccggcacct
     2641 cgatcgattc caggtcgggt cg
//
LOCUS       DATBNL010000278         1968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_162944, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000278 DATBNL010000000
VERSION     DATBNL010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162944"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..930
                     /gene="gpmA"
                     /locus_tag="VIC30_04710"
     CDS             178..930
                     /gene="gpmA"
                     /locus_tag="VIC30_04710"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEY7803720.1"
                     /translation="MYKLVLMRHGESQWNLENRFTGWADVDLTDTGRQQAWEAGQLLR
                     EKGYEFDLAYTSVLKRAIRTLWIALDALDQMYVPVHNSWRLNERHYGNLQGLNKAETA
                     AKFGDEQVLIWRRAYAIAPDPLPLDDERHPKFDSRYAKLAPEQLPATECLSDAVDRVL
                     PFWNESIAPAIRKGRRVLISAHGNSLRALIKHLDDVSEQDIVALNIPTGQPLVYELDE
                     NLKPIKHYYLADPAVIEAALAAVAAQGKAKQD"
     gene            932..>1968
                     /locus_tag="VIC30_04715"
     CDS             932..>1968
                     /locus_tag="VIC30_04715"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEY7803721.1"
                     /translation="MRQPAPLLALVLLLALSPVGAVYAQQAAKAVESAQQRKSQAEQA
                     KAALRERIAEVQARLDKKSAQYKRASDALKQSEKAISDTTRRLRALSHEIDQGELTLS
                     DLQAQIDTTQDRLQADREALAAQLLAQYRSNLSPWSAMLSGQDPQTLGRELGYLSFVS
                     GARVQIIDSLREGVTELSGLQAAQTQQQEQLAKQDAELKAQQQTLQRERKARQQLLVK
                     LEGAIAAERAERDKLAQDEQRLGDLIESIGQEIAQVKADAQHAQAIRKDILEALPEGE
                     GLKRGIALPAQGPIVARYGSSRPDGGDWRGVLIEVKPGAPVKAVAAGTVVYATWLRGF
                     GNLIIVDHGDES"
BASE COUNT          479 a          510 c          577 g          402 t
ORIGIN      
        1 atggtaggcc acaacagcat tagtcctgag gacacggcaa tggccacgag catcaggtta
       61 tcggtttgta agaagaaatc cacggtgtat tttcacttag aaagatgggc gtccggacag
      121 gacaatggtg gtgattataa aatgactact ttaattcaat gaaataaact aaaaatcatg
      181 tacaagctcg tgctaatgcg tcatggcgaa agccagtgga atcttgaaaa ccgattcacc
      241 gggtgggccg atgtcgattt gactgacact ggtcgtcaac aggcctggga agcgggtcag
      301 ttgctacgag aaaaaggtta tgaatttgat ctagcctaca cctcagtgct caaacgcgcc
      361 attcgcaccc tatggatagc acttgatgcg cttgaccaaa tgtacgtgcc agtacataac
      421 tcctggcgcc tcaatgagcg ccattatggc aacttgcaag gcttgaacaa ggccgaaacg
      481 gccgctaagt tcggtgatga acaagtgctg atctggcgcc gagcttatgc cattgcccca
      541 gatccgttgc cactcgatga tgagcgacat cccaaattcg actcgcgtta cgccaaactc
      601 gcgcctgagc aattgcccgc aacggaatgt ctgagcgatg cagtcgatcg cgtgttgccg
      661 ttttggaacg agtcaattgc cccggccatc cgaaaggggc gtcgcgtgct gatttcagcg
      721 catggtaata gcttgcgggc gttgattaag catctagacg atgtctctga acaagacatc
      781 gtcgcgttga acattccaac cggtcagcca ctggtttatg agcttgacga gaatctcaag
      841 ccgatcaagc actactacct ggccgatcca gcggtcattg aggccgcgtt ggccgccgtg
      901 gccgcacaag gcaaggccaa gcaggattaa gatgcgacaa ccagcgcccc ttctcgcgct
      961 ggtgttgcta ctggcgctat cgcccgtggg ggctgtatac gcgcaacagg ctgcgaaagc
     1021 cgtggaatct gcacaacaac gcaaatcaca ggctgagcaa gccaaagcgg cattgcgcga
     1081 gcgtatcgca gaggttcagg cgcgcctaga taaaaagtca gcgcagtaca aacgggcctc
     1141 ggatgcgctt aagcagtccg agaaagccat ctcagacacc acccgcaggc tgcgcgcctt
     1201 gagccatgag atcgatcaag gcgaacttac actgagcgat cttcaggcac agatcgacac
     1261 cacgcaagat cgtttgcagg cagatcgaga ggcgttggcc gcgcaattgc tggctcaata
     1321 ccgcagtaat ctctcgccgt ggagcgcgat gctgtcaggg caagatcccc aaacgcttgg
     1381 ccgtgagctg ggttatttgt cttttgtgtc tggcgcccgt gtgcagatca ttgacagctt
     1441 gcgcgaggga gttacggaac tttctgggct gcaggcggct caaacccaac agcaggaaca
     1501 attggcgaag caggatgctg agcttaaggc ccagcaacag accttgcagc gcgagcgcaa
     1561 ggcgcgccaa cagctgttgg tcaagctcga gggcgccatt gctgctgagc gtgccgagcg
     1621 tgacaagctt gctcaggatg aacagcggct tggtgatttg attgagtcga tcgggcaaga
     1681 aattgcccaa gttaaggccg atgcacagca cgcacaggcc attcgcaagg acatcctcga
     1741 ggcattgccc gagggtgagg ggctaaagcg aggcattgcc ctgcctgctc aagggccgat
     1801 cgtggcacgt tacggcagca gccggcctga tggaggggat tggcgcggtg tcttgatcga
     1861 ggtcaagcca ggtgcgccgg ttaaagcggt cgcagcaggc acagtggtct atgccacatg
     1921 gttgcgaggt ttcgggaact tgattattgt ggatcacggt gatgagtc
//
LOCUS       DATBNL010000279         2884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_33235, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000279 DATBNL010000000
VERSION     DATBNL010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33235"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VIC30_04720"
     CDS             complement(<1..206)
                     /locus_tag="VIC30_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019576841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7803722.1"
                     /translation="MKEFKDLKQQWLQDPEVKKAYLETKPEFEVAGTLIAARATARLT
                     QAEVAKRMGTTQSVVARLESGRTL"
     gene            complement(203..535)
                     /locus_tag="VIC30_04725"
     CDS             complement(203..535)
                     /locus_tag="VIC30_04725"
                     /inference="COORDINATES: protein motif:HMM:NF017757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7803723.1"
                     /translation="MKQSWTVKLLNHSVEKELNRLDANMKAKFVHVCDLLETYGPKEV
                     GLPHIKHLTGDLWEIRLVSKSGAARAIYVTLSERTIMVVHLFLKKTQKTPKQALSLAM
                     KRIKGYTQ"
     gene            complement(922..1693)
                     /locus_tag="VIC30_04730"
                     /pseudo
     CDS             complement(922..1693)
                     /locus_tag="VIC30_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008159209.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
     gene            complement(1696..2130)
                     /locus_tag="VIC30_04735"
     CDS             complement(1696..2130)
                     /locus_tag="VIC30_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007860479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY7803724.1"
                     /translation="MTNTTSKYLVRPQDVEPYHPANHHETTNLRLVSRHNVGAQKMEV
                     ILGTLGKSGGALPHAHPGVEQVCYLLEGTAHVEVGGEVGGGASDQVGDQIAHESFDMV
                     PGDTCFFPADVMHKFEVTSETPVKLLVIYSPPYDENPAKVRR"
     gene            complement(2156..>2884)
                     /locus_tag="VIC30_04740"
     CDS             complement(2156..>2884)
                     /locus_tag="VIC30_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020200595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY7803725.1"
                     /translation="SQTPWQAIDVNIRGLQNMLEACAINGVKEVIFASSNATYGYGTG
                     IKGELHETLPFHSEGAPPAAILYGASKIMGEQLCRTFLQQQGLDYLVLRYSTVYGECQ
                     HYRAANALYIMQAYDQIQSGQAPVMPGDGTETKHFVYVTDVARANVAALQSTTTDTAM
                     NISGPDAVTTGELVQFILDYCGSDLKPEIKPDPPGTVRLTSGGAFYIPHDKAKAAIGW
                     EPEVNMQDGIKRLLDWRKRHDAKQ"
BASE COUNT          628 a          758 c          765 g          733 t
ORIGIN      
        1 tgtaaggttc tgccgctttc aagcctggcg acaaccgatt gcgttgtacc catgcgctta
       61 gccacctcgg cttgtgtcaa cctagctgtg gctcttgcgg cgatcagagt gcctgcgact
      121 tcaaattcag gcttcgtctc aaggtaggct ttcttgacct cggggtcttg cagccattgt
      181 tgtttgagat ctttaaattc tttcactgcg tatatccctt tattcttttc atggccagcg
      241 acagcgcctg tttgggtgtt ttttgtgttt tctttaaaaa caaatgcacc accataatgg
      301 tgcgctcaga caatgtgaca tatattgctc gtgctgcacc gcttttggat accaaacgta
      361 tttcccacag atcccccgtc aagtgtttga tgtgcggaag ccccacttct ttaggtccat
      421 atgtctcaag taaatcacat acatgtacaa actttgcttt catatttgcg tcgagtctgt
      481 tcagttcctt ctcgacgctg tggttcaaaa gtttgacggt ccatgactgt ttcatagtat
      541 agcaataaag cgataagcag agtgggagac gtaagcgaca gacaaagagc tgtcacattg
      601 agcgtccatg ctggcgtcag gccaaatgtg tatgggaaat ggttttgcag aacccagaag
      661 acgagcatca tgccactact gcaactcaat tcgtgggtgg gtgtgccgag tttgccctag
      721 cgctttggat cgccacggat ttatatcgct ttcttaagta ggttatctgc gcaagtagct
      781 ctgagccatg gacgatgcaa gggcaatgtc tgagattgcg ttctttagta agcacttgac
      841 cgcttggctc ggaaccgggt tgctcgtagc gccgcaagcc gatatttctg gccgcttttg
      901 cagctgtgac ccagttctga ctcaggaccc gttccacttg gggtttcttt tctgagcaaa
      961 ggccgcgaac cccctcttgg gcgtcaggca aacccgccac atgacaaaag ttgtcaacag
     1021 ccgaactcac cgctgcacga tagtgcgggt cactggcttc tttgaaagcc tgacgcccga
     1081 gtcgcatgac atctctgggt ttgccacaaa acaccgccgc aagttctctg gcagctggca
     1141 tgacttggtc ggctggcacc acctgactga ccagtccgag tgctttggcc tcatctgggc
     1201 caaacgtgcg ccctgagaac aacagttcaa atgcacgatg tttgcccacg atcttaggta
     1261 ggtggttaaa gtgaatcgac ggcaaaacac ccgcatcgat ttccgggtag ccgaaggtcg
     1321 actcttcaga ggcaatgatc acatcacacg aaattgacat cgtcatgccg ccaccacggg
     1381 ctgtgccatt gaccgcagca atcgagggct tgtttaacgc atactgcgca tcggtcattt
     1441 ggcgataaag tcgctcaagc aagtcaggga cattggcttg tccgtcgttg atggctttta
     1501 aatccaaccc cgcacaaaac cgccccggca cggcgctcga cacaatgacc gccctgacat
     1561 catcgtcttg cccggctttg tgtaaggcag cgatgtagtc gtcaagcagc gcttcggtca
     1621 gcgcattgac gggtgggttg tgaatgagga tttcggcaac atggttggcc gtggtgtact
     1681 ggatgagtga catggctagc gcctgacctt ggctgggttt tcatcgtaag ggggactgta
     1741 gatcaccaac aatttgacgg gcgtctcaga agtcacttcg aatttgtgca tcacatctgc
     1801 cggaaagaag caggtatcac cgggtaccat gtcgaaggac tcatgcgcaa tctgatcacc
     1861 gacctgatca ctagccccac cgccgacctc accgccaacc tccacgtgcg cagtgccctc
     1921 gagcagatag cagacctgct ccacaccggg gtgggcgtgc ggtagcgcac caccggactt
     1981 gccaagcgtg cctagaatca cctccatctt ctgggcaccg acgttgtgac gtgagaccag
     2041 tcgcaaattc gtggtctcat ggtgattggc aggatgatac ggttcgacat cctgagggcg
     2101 tacgagatat tttgatgttg tgtttgtcat atcaagtctc cggttgtttg atacttcact
     2161 gctttgcgtc atgccgtttg cgccagtcaa gtaaacgctt gatgccatct tgcatgttga
     2221 cttccggttc ccagccgatg gcggccttgg ctttgtcgtg tgggatgtag aacgcaccgc
     2281 ctgaggttag ccgaaccgtg cccggtgggt ctggtttgat ttctggtttt aagtcactgc
     2341 cacagtagtc aagtatgaac tgaactaact cgccggtggt tacagcatcg ggaccagaga
     2401 tgttcatggc cgtatcagtg gttgtgcttt gcaaggcagc aacgttggcg cgcgccacgt
     2461 cagtgacgta gacgaaatgt ttggtttccg ttccatcgcc tggcatcacg ggtgcctgac
     2521 ccgattgaat ctgatcatag gcctgcatga tgtagagcgc gttggcagcc cgatagtgtt
     2581 ggcactcgcc atagacagtg gagtagcgca gcaccagata atccaaaccc tgttgctgca
     2641 aaaaggtgcg acacagttgc tcgcccataa tcttagaggc gccgtaaagg atggctgccg
     2701 gcggagcacc ctcagaatga aatggcagcg tctcgtgcag ttcgcctttg atgccagtgc
     2761 cataaccata ggtggcgtta gacgatgcaa aaattacttc tttgacgcca ttgatggcgc
     2821 aagcctccag catgttctgc agaccgcgga tgttcacgtc aatcgcctgc catggcgttt
     2881 gaga
//
LOCUS       DATBNL010000280         6356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_142859, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000280 DATBNL010000000
VERSION     DATBNL010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6356
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142859"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..935)
                     /gene="folP"
                     /locus_tag="VIC30_04745"
     CDS             complement(87..935)
                     /gene="folP"
                     /locus_tag="VIC30_04745"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEY7803726.1"
                     /translation="MAIIWQCGRFEFDLERPILMGIVNVTPDSFSDGGRYDSARAAID
                     HARLLIEQGAQILDIGGESTRPGAEPVSVSEELDRVLPVLKALGSDNVALSVDTCKPD
                     VMRQALKAGADIVNDVTGFKQVDAIRVVAEHANCGVCTMHMQGEPRTMQQAPTYDDVV
                     QDVAEALLASAKRLQDAGISANRIALDVGFGFGKTVEHNYTLLRQIGSFVELGYPIVV
                     GVSRKSMIGTVTGRPVGERVTGSVAAALIAVTLGARILRVHDVQATRDAMAVWEAVTY
                     GPEEKK"
     gene            complement(947..2839)
                     /gene="ftsH"
                     /locus_tag="VIC30_04750"
     CDS             complement(947..2839)
                     /gene="ftsH"
                     /locus_tag="VIC30_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006222882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEY7803727.1"
                     /translation="MNNSFSKIAVWVVIALVLFTVFRQFDGRPAAQESVSYTQFMDDA
                     QAGKIRKVDVQGDVLHVIPDNGRPYTLTSPGDLWMVSDLMKAGVQVSGKAREEPSLLM
                     SIFVSWFPMLLLIAVWIFFMRQMQGGGKGGAFSFGKSKAKMLDETTNSITFADVAGCD
                     EAKEDVTELVDFLRDPSKFQKLGGRIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFSI
                     SGSDFVEMFVGVGAARVRDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGGNDEREQT
                     LNQMLVEMDGFESGQGVIVIAATNRPDVIDPALLRPGRFDRQVVVPLPDILGREQILR
                     VHMRKVPVGTNVDGMVLARGTPGFSGADLANLVNEAALFAARRNGRLVDMSDFEKAKD
                     KIIMGAERRSIVMPEDERRNTAYHESGHAVVARMLPKTDPVHTVTIIPRGRALGVTMQ
                     LPEGDRYSMDKERLLSTIAVLFGGRIAEELFMDQMTTGASNDFERATAIARDIVTRYG
                     MTTELGPMVYADNEGEVFLGRSVTKTTHMSEATMQKVDSEIRKIIDEQYTRARTILEE
                     NRPKVETMAKALLEWETIDADQINDIIEGRPPRPPKVPDAPTDVTPPSAGPTADAPGG
                     NPAEAV"
     gene            complement(3156..5939)
                     /gene="secA"
                     /locus_tag="VIC30_04755"
     CDS             complement(3156..5939)
                     /gene="secA"
                     /locus_tag="VIC30_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEY7803728.1"
                     /translation="MLSLIKKILGTRNDRLLKQLAKDVKRINALEPSMQALTDQELQA
                     LSGKLKERVQGGESLDAILPEAFALVRESSQRVFGMRHFDVQLIGGMVLHTGKIAEMR
                     TGEGKTLMATLPVYLNALSGRGVHVVTVNDYLARRDAGWMGRLYNFMGLSVGVVVPQQ
                     SNEEKRAAYRADITYGTNNEFGFDYLRDNMEYRAEDRRQRGLVFAIVDEVDSILIDEA
                     RTPLIISGQAEDHTALYKAVNAVPPMLTRMEHEPKPNEPEPEGDYWVDEKNNQVYMSE
                     AGHENAERVLTEQGLLPEGQSLYDPRHISLMHHLMSALRAHSLFHRDQHYVVQDGEVV
                     IVDEFTGRLMVGRRWSDGLHQAVEAKENCKIQLENQTLASITFQNYFRMYEKLAGMTG
                     TADTEAYEFQEIYSLETVIVPTNKPMVRKDMHDQIYKTEQEKYNAILNDIRQCQTSGQ
                     PVLVGTTSVESSELLSNALTEAGLKHEVLNAKQHAREAEIVAQAGKPGAITIATNMAG
                     RGTDIVLGGNVEKQVEMANADESLDDAAREQKIAELRDGWAALHQQVLDAGGLHIIGT
                     ERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDSLMRIFAGDRVRAIMERLKLPEGEP
                     IEAGMVNRSIESAQRKVEGRNFDIRKQLLEYDDVANDQRRVLYGQRNEVLESTNIGEQ
                     IDSLRDGALTDLVREFVPEGSVEEQWDLVALQNVLESDWQLNVPIVETVENAKEFGEE
                     DIVDLVVKAGQQAYAEKIAKVSEETWRPFERSVMLQVIDNHWREHLSALDHLRQGIHL
                     RGYAQKNPKQEYKREAIQLFSLMLERVRDDVSKLLLTVKVQGREEVEAAEREAEKQHV
                     QNVQYHHSDYDEALAEPASGQRSSSAAAEHTGSAAAAAAGTVRNPYAKVGRNEPCPCG
                     SGKKFKQCHGKLA"
     gene            complement(6007..>6356)
                     /locus_tag="VIC30_04760"
     CDS             complement(6007..>6356)
                     /locus_tag="VIC30_04760"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY7803729.1"
                     /translation="PIKQQRRFHYGLDIASPAGTPIVSVAPGRVVFAGWRRGYGRVVE
                     IEHGKGWVSRYAHAKKISVQQDQQVLAGQMIGQVGRSGHATGSHLHLEIERRGKRLDP
                     MAFWVGVNSTSTQ"
BASE COUNT         1431 a         1885 c         1595 g         1445 t
ORIGIN      
        1 gtagccgagt ttcagcgcga attgcgggtt aatgacctca ccacccacct caccacggac
       61 accgtcggtg ccaaaatatc gtcgactcat tttttttctt ctggaccgta ggtcaccgcc
      121 tcccaaactg ccatcgcgtc acgcgtggct tgaacatcgt gcacgcgaag tatgcgtgcc
      181 cctaatgtta cagcgatcag cgcagcggca acactgccag tcacgcgctc accaaccggg
      241 cgccccgtaa ccgtccctat catggacttg cgcgacacac ccacgacaat cggataaccg
      301 agttcaacaa aagagccgat ctgacgcaac agcgtgtagt tgtgctccac ggtcttgcca
      361 aacccaaagc caacgtccag tgcaatgcgg ttagccgaaa taccggcatc ttgcaagcgc
      421 ttagcgcttg caagcaaagc ctcagcgaca tcttgcacga catcgtcata ggtgggggcc
      481 tgctgcatgg tcctgggctc accttgcatg tgcatggtgc aaacgccaca gttagcatgc
      541 tcagcaacca cacggatcgc gtcgacctgc ttaaagccgg ttacatcgtt cacgatatcg
      601 gcgccagctt tgagggcctg acgcatgacg tcaggcttgc acgtgtcaac agataacgcg
      661 acgttatctg agccgagcgc cttaagcact ggtagcaccc ggtctagctc ttctgagacc
      721 gagacgggtt cagccccagg cctggtagat tcaccaccaa tgtctaggat ttgggcgcct
      781 tgctcgatca gcaagcgcgc atgatcgatt gccgcccggg cactgtcgta ccgcccccca
      841 tcagaaaaag agtctggggt gacattgacg atgcccatta aaattgggcg ctcgagatca
      901 aactcgaagc gcccacattg ccagattatt gccatgctgc cctttgttag acagcctcgg
      961 cagggttgcc gccaggtgca tcagcggttg gcccagctga tggcggtgtg acgtccgtcg
     1021 gggcgtccgg cactttaggc ggacggggtg ggcgaccctc gatgatgtca ttgatctgat
     1081 cagcatcgat ggtttcccac tcaagcaagg cctttgccat ggtctcaacc ttggggcggt
     1141 tttcctcaag gatcgtacgg gcgcgtgtgt actgctcgtc aatgatcttg cgaatctccg
     1201 aatccacttt ttgcatggtg gcttcggaca tgtgcgtggt ctttgtcacg ctacgaccca
     1261 agaaaacctc gccttcattg tcagcgtaga ccatgggtcc aagctccgtg gtcatgccat
     1321 aacgcgtcac gatgtcgcga gcaatcgccg ttgcacgttc aaagtcgttg gaggcgcccg
     1381 tggtcatctg atccatgaac aactcttcgg caatccggcc gccaaacaac acggcaatgg
     1441 tcgagagcaa acgctctttg tccatactgt agcgatcgcc ttcgggcaac tgcatggtca
     1501 cacccaaagc gcgaccacgc gggatgatgg tgactgtgtg aaccggatcc gtcttaggca
     1561 gcatgcgagc aaccacggcg tggccagatt cgtgataagc cgtgttacga cgctcgtctt
     1621 caggcatcac gatcgagcga cgctcagcac ccatgataat tttgtctttg gccttctcaa
     1681 agtcggacat atcaacgagt cgcccgttac gacgtgctgc aaacaaagca gcttcgttga
     1741 ccaagttggc caaatctgcg ccagagaagc cgggggtacc gcgcgctaac accatgccat
     1801 caacgttggt gccgaccgga actttacgca tgtgtacacg caagatctgc tcacgcccaa
     1861 gaatgtcggg caggggcacc acaacctgac ggtcaaaacg accagggcgc agcaaagcgg
     1921 gatcaatcac gtcggggcgg ttggttgctg caatcacgat gacaccctgg cctgactcaa
     1981 aaccatccat ctcaacgagc atctggttca gtgtctgttc acgctcgtcg ttaccgccac
     2041 caagaccggc gccacgctgg cgacccacgg catcgatttc gtcgatgaaa ataatgcaag
     2101 gtgcatgctt tttggcgttc tcgaacatgt cacgcacacg tgccgcaccc acaccaacga
     2161 acatttcaac gaagtcagaa cccgagatgc taaagaatgg caccttggct tcaccggcga
     2221 tggccttggc caacagcgtt ttacctgtac cgggcgagcc caccatcagc acaccgcgag
     2281 ggatacgacc accgagtttt tggaacttgg atgggtcacg caagaagtca acgagctcgg
     2341 tcacgtcctc tttggcctca tcgcaaccag caacatctgc gaatgtaatg ctgttagtgg
     2401 tctcatcgag catcttggcc ttggacttac caaaactaaa cgcaccgcct ttgccgccac
     2461 cttgcatctg gcgcataaag aagatccaga cagcgatcaa cagcagcatc gggaaccagg
     2521 acacgaagat gctcatcaac agtgacggct cttcacgtgc tttgccagag acctgcacac
     2581 cggccttcat cagatcggaa accatccaaa ggtcaccagg tgatgtaagc gtgtacgggc
     2641 ggccgttgtc agggatgaca tgcaacacgt ctccttgaac atcaaccttg cgaatcttgc
     2701 ctgcttgggc atcatccatg aactgggtgt agctcacaga ctcttgtgcc gctggtcgcc
     2761 cgtcaaactg tcggaagaca gtaaatagca ccagggcgat gacgacccat acggcgatct
     2821 tggaaaatga attattcacg gcctaactcc tgctcgacat gccttccccg ccccatagca
     2881 gggttgcttg tttgtcactg caaattggtc taacacactt ggattaccca ttctaactgg
     2941 aacagtctaa atcgaccatt tatcccgtca gcataactgg gtaagtggtt acacaaaaac
     3001 cactgcgctt gtctatatag tcagtctacc gaactctgac catagactgt aaaaatagtt
     3061 tcaatggaat tcatagcgtg aggcttttag ccatcgccat tcaggcatta acccaacgcc
     3121 agcaaattgc cgacgttgga accaattgca gtcatttacg ctaattttcc atggcattgc
     3181 ttgaatttct taccactacc acacggacac ggttcattac ggcccacctt ggcatagggg
     3241 ttacgcacgg ttccagcggc tgcagccgct gctgaccctg tatgctcagc tgccgccgat
     3301 gatgagcgct gacctgacgc cggctcagcg agcgcttcgt catagtcgga gtggtgatac
     3361 tgaacatttt gtacatgctg cttctcggct tcgcgttcag cagcctcaac ttcttcacgc
     3421 ccttgcactt tgacggtcaa taacagttta gaaacatcgt cgcgtacgcg ctcaagcatc
     3481 agcgagaaca actgaatcgc ctcgcgcttg tactcctgct tggggttttt ctgggcgtac
     3541 ccgcgtaaat gaatgccttg acgcaaatga tcaagtgctg acaaatgctc gcgccaatgg
     3601 ttgtcgatca cctgcagcat gactgagcgc tcaaaggggc gccaagtttc ttcacttacc
     3661 ttggcaattt tttcggcata ggcttgttga ccagccttga ccaccagatc gacgatatcc
     3721 tcttcgccaa actctttggc gttttccacc gtctccacga tcgggacatt caactgccag
     3781 tccgactcaa ggacattttg caaagcaaca agatcccact gctcttcaac cgaaccttct
     3841 ggcacaaact cacgcaccag atcggtcaat gcgccatcgc gcaggctgtc gatttgctcg
     3901 ccaatgttag tgctctcgag cacctcgtta cgctggccgt acaacacccg acgctggtcg
     3961 ttggcgacat catcatattc gagcagctgc ttgcgtatat cgaagttacg tccttcgacc
     4021 ttgcgctgag ccgactcaat cgaacggttc accatgcctg cttcaatggg ctcgccttct
     4081 ggcagtttca ggcgctccat aatggcgcgc acacgatcac cggcgaagat ccgcataagc
     4141 gaatcatcga gagacaggta aaagcgcgaa gagcccggat caccttgacg gccggcacga
     4201 ccgcgcaact gattgtctat tcgacgcgac tcgtggcgct cggtaccgat gatgtgcaag
     4261 ccacccgcat cgagcacttg ctggtgcagt gcggcccaac catcacgtaa ctcggcaatc
     4321 ttttgctcgc gtgctgcatc gtctagtgac tcgtcagcgt tggccatctc tacctgtttt
     4381 tcgacattac caccgagcac aatatcggtg ccacgaccgg ccatgttggt agcaatggta
     4441 atggcacccg gcttacctgc ctgcgccacg atttcagcct cgcgggcgtg ctgcttagcg
     4501 ttaagcactt catgctttag gcctgcttct gtcagcgcgt tggacaatag ttcggagctc
     4561 tccacgctcg tggtacccac gagcacaggt tgaccggagg tctggcactg gcgaatgtcg
     4621 ttcagaatcg cgttgtactt ttcttgttca gtcttgtaga tctgatcgtg catgtcctta
     4681 cggaccatgg gcttgttcgt cggcacgatg accgtctcaa ggctgtaaat ctcttgaaac
     4741 tcataggctt ctgtatcggc cgtgcccgtc atgccagcaa gcttttcata catccggaag
     4801 tagttctgga atgtaatcga agccaacgtc tggttctcaa gctgaatctt gcagttctct
     4861 ttggcttcaa ccgcttggtg caagccatcg gaccagcggc gcccaaccat taaacgcccc
     4921 gtgaactcat caacaatcac cacttcacca tcttgcacga cataatgttg gtcacgatgg
     4981 aataggctgt gggcgcgtag cgccgacatc aggtgatgca tcaaagaaat atgacgcgga
     5041 tcgtagagcg actgtccttc cggcaaaagc ccctgctccg taagaacgcg ttcggcgttt
     5101 tcatggccgg cctctgacat gtagacctga ttgttctttt catcaaccca gtaatcgccc
     5161 tcgggctctg gctcgttggg cttgggctca tgctccatgc gcgtgagcat gggcggcaca
     5221 gcatttaccg ctttatacag tgcagtgtga tcttcggctt ggccggaaat aatcaacggc
     5281 gtacgcgcct catcaatcag gatcgagtca acctcgtcaa cgatagcaaa caccagacca
     5341 cgctggcggc ggtcttcagc gcgatactcc atgttgtcgc gcaggtagtc aaacccgaat
     5401 tcgttgttgg tgccgtaggt gatatcggca cgataggctg cgcgcttttc ttcattgctt
     5461 tgctgtggca caacgacacc gacgcttagg cccatgaagt tgtacaaccg gcccatccag
     5521 ccagcatcac ggcgagccaa atagtcgttg acggtcacca cgtgcacacc gcggccgctc
     5581 aaggcattca agtacacagg caacgttgcc ataagtgtct tgccttcacc agtacgcatt
     5641 tcggcaatct tgccggtgtg caacaccatg ccaccgatta gctgcacatc gaagtggcgc
     5701 ataccgaaga cacgctgact tgactcacga accaacgcaa aggcttccgg caaaatggca
     5761 tcaagcgatt caccgccttg caccctttct tttagtttgc ccgacaaggc ttgcagctct
     5821 tgatccgtga gcgcctgcat cgacggctct agggcattga tccgtttaac gtctttggcg
     5881 agctgtttga gcaaccggtc gttccgggtt cccaagattt tcttaattag agataacatg
     5941 cgtcagtgat cctagcggtc taccattgcg ctaaacaagt cctcaagtgt accgcaggcg
     6001 cctgtctcac tgtgtgcttg tcgaattaac acctacccag aaggccatag ggtctagacg
     6061 cttgcccctg cgctcaatct ctaagtgcaa gtgcgatccg gtggcgtgcc ctgagcgacc
     6121 aacctgccca atcatctgtc cggccagcac ttgctggtcc tgttgcacgg aaattttctt
     6181 ggcatgggcg taccgcgaca cccagccttt gccgtgttcg atctccacca ctcgaccata
     6241 gccacggcgc catcccgcaa aaaccacacg accaggtgcc accgagacga tcggtgtgcc
     6301 agcgggcgag gcaatatcaa gaccatagtg gaaacgtcgc tgctgtttga taggat
//
LOCUS       DATBNL010000281         2294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_102937, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000281 DATBNL010000000
VERSION     DATBNL010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102937"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..333
                     /locus_tag="VIC30_04765"
     CDS             115..333
                     /locus_tag="VIC30_04765"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008640980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEY7803730.1"
                     /translation="MACSCAFRDFRQAFAFMTEVALLAEKADHHPEWSNVYNKVNITL
                     TTHDAGGITERDLALAKQIDAALAGYSA"
     gene            complement(395..763)
                     /locus_tag="VIC30_04770"
     CDS             complement(395..763)
                     /locus_tag="VIC30_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009520294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 domain-containing protein"
                     /protein_id="HEY7803731.1"
                     /translation="MQDALNVLGEPLQSCSFDPLTGYFRDGCCNTDDQDHGTHVVCAR
                     MTAEFLTFSAERGNDLITARPEWRFPGLKPGDRWCLCATRWKEALQAGVAPPVVLAAT
                     HSKVLEFVTLEDLKANAYAN"
     gene            complement(791..>2294)
                     /locus_tag="VIC30_04775"
     CDS             complement(791..>2294)
                     /locus_tag="VIC30_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017452293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cryptochrome/photolyase family protein"
                     /protein_id="HEY7803732.1"
                     /translation="GDQLNSQHSWFKSVEPDVHYVMMEVRQETDYVMHHAQKVLGIFA
                     AMRAFAEHLRQAGQNIHYLAIDDTANTHDIPTNLAELAHQIGATTIEYQAPDEWRLDD
                     QFSMWATDSGLTVSMVDTEHFLTERSTAAGMFKGRKRWLMEQFYRTLRQQHGMLMDGK
                     DPVGGQWNFDAENRKAWKGQPPPPADPRPVHNHRELWQTITDAGVKTFGTPQADAFRW
                     PVNRAEALAQLEHFMQHVLPNFGDYQDAMHTDEPFLFHSLLSFALNTKMLSPKEVIAA
                     AERAWREGHAPLPAVEGFIRQILGWREYVRGVYWSQMPGYTSGNALAHDTPLPDWFWD
                     GQTRMQCLSQSIGQSLEHAYAHHIQRLMIIGNFALLAGVDPQAVHRWYLGVYIDAFEW
                     VEAPNTLGMSQFADGGLLATKPYVSSAAYVGRMGNYCKGCHYNPKERLGEKACPFNAL
                     YWDFFDRHASHFEKNPRIGMAYRQLAKMTPTDRQAIREQAIVWRDNLNTL"
BASE COUNT          518 a          607 c          648 g          521 t
ORIGIN      
        1 gaggtaaaga tgtcgaacgc atcagtcgtt attaaagggc aggcattaac cgatgcctgc
       61 caaacactag acccgcgctg gcaggtgtaa gatcaaacgg ctgattcgtc atcattggcg
      121 tgtagctgtg cgtttcgcga ctttcggcaa gcgttcgctt tcatgacgga agtggcattg
      181 ctcgcagaaa aagctgacca ccaccctgaa tggtctaacg tctacaacaa agtcaacatt
      241 acgctcacca cccacgatgc aggtggcatc accgagcggg atttggcatt agccaagcaa
      301 atcgacgcgg cgctcgccgg atatagcgct tgatgaacgg cgcttgatga agtgcgctag
      361 tacaggccgc agcacgtcag ttgctagaag ggcgttagtt ggcgtacgcg tttgccttta
      421 gatcttctag cgtgacgaac tcaagcactt tgctgtgggt ggcggcaagc acgacgggag
      481 gggccacacc ggcttgcaag gcctctttcc aacgtgtggc acatagacac cagcggtcac
      541 cgggcttgag cccggggaat cgccactcgg ggcgcgctgt gatcaagtca ttgccacgtt
      601 cagcagaaaa cgtcagaaac tcagcggtca ttcgcgcgca caccacgtgc gtgccgtgat
      661 cttggtcatc ggtgttgcaa caaccatcac gaaagtaccc ggtcagtggg tcaaacgaac
      721 aggactgaag gggctcaccg agtacgttta gtgcatcttg catgaggttg ctcccagata
      781 gcaaataaag ttatagcgta ttcagattgt cgcgccagac gatggcttgc tcgcgaatgg
      841 cttggcgatc tgttggggtc attttagcga gctgtcggta tgccatgcca atacgtggat
      901 ttttttcaaa atgactggca tgacggtcaa agaaatccca gtacaacgca ttaaaagggc
      961 aggctttctc gcccaggcgc tctttggggt tgtagtgaca acctttgcag tagttgccca
     1021 tgcgaccaac ataagccgcg cttgagacgt aaggcttggt ggcaagtaag ccaccatcag
     1081 caaactgact catgccaagc gtattgggtg cttcgaccca ttcaaaggca tcgatataga
     1141 ccccgaggta ccagcggtgc acagcctgcg gatcaacgcc tgcgagcagc gcaaagttgc
     1201 cgatgatcat cagtcgctga atgtggtggg cgtaagcatg ctctagcgac tgaccgatgg
     1261 attgactcaa gcactgcatg cgcgtttgtc catcccagaa ccaatcgggt aagggcgtgt
     1321 cgtgcgccag tgcattgccc gaggtgtagc ctggcatctg tgaccagtaa acaccgcgca
     1381 catactcacg ccagcccagg atttggcgga taaagccttc aacggctggc agcggtgcat
     1441 gaccctcgcg ccaggcacgc tcagccgcag cgatcacctc ctttgggctt agcattttgg
     1501 tgttcaatgc aaacgacagc aagctgtgaa acaaaaacgg ctcgtcggtg tgcatggcat
     1561 cttgatagtc accaaagttt ggcaacacgt gttgcataaa gtgctcaagc tgcgccaacg
     1621 cctctgcgcg attcaccggc catctaaagg catctgcttg gggggtgcca aatgttttaa
     1681 cgccagcatc tgtgatggtt tgccatagct cgcggtgatt gtgcacggga cgtgggtctg
     1741 caggcggtgg gggctggcct ttccaggcct tgcggttctc cgcatcaaaa ttccactgtc
     1801 cacccacggg atccttgccg tccatcagca tcccgtgttg ctgcctcaga gtgcgataga
     1861 actgctccat taaccagcgc ttgcgaccct taaacatccc agcggctgta gagcgttcgg
     1921 ttagaaagtg ttcggtgtca accatcgaga cggtgagacc gctgtctgtg gcccacatac
     1981 tgaactgatc atcgaggcgc cattcgtcag gtgcttggta ttcgatcgtg gtggccccta
     2041 tttggtgggc tagctcggcc aggttcgtcg ggatatcgtg ggtgttggcg gtgtcatcaa
     2101 tggccaggta atgaatgttt tgcccagcct ggcgcaaatg ttcagcaaag gcacgcatgg
     2161 ccgcaaatat gccaagtacc ttttgtgcat gatgcatgac atagtccgtt tcctgacgca
     2221 cttccatcat gacgtagtgc acgtcgggtt cgacagattt aaaccagctg tgctggctat
     2281 tgagttgatc accg
//
LOCUS       DATBNL010000282         1579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_152825, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000282 DATBNL010000000
VERSION     DATBNL010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152825"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VIC30_04780"
     CDS             complement(<1..258)
                     /locus_tag="VIC30_04780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEY7803733.1"
                     /translation="MAFVVIIPARWASTRLPGKMLADLVGKPLIVRTAERACQSNASR
                     VVVATDHAEIAQTLQSHGYETVMTDVELASGTDRLAQAARLL"
     gene            complement(283..471)
                     /locus_tag="VIC30_04785"
     CDS             complement(283..471)
                     /locus_tag="VIC30_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEY7803734.1"
                     /translation="MDHKLLDILVCPICKGRLQMNADKTGLICRPDKLVFPIDDGIPV
                     MLESEAKPLDSEATSSTV"
     gene            complement(475..>1579)
                     /gene="lpxK"
                     /locus_tag="VIC30_04790"
     CDS             complement(475..>1579)
                     /gene="lpxK"
                     /locus_tag="VIC30_04790"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEY7803735.1"
                     /translation="SCMAMTQKLHAWIARQWQHRGIWAYTTWPLARIYQYFANKARDA
                     YRTGSKAPYRAPVPVVVVGNIYVGGTGKTPVTCGLAQILQELGYTPGLVSRGYGRRQT
                     TLPATGQGLHLDWQTYGDEPALIALRTGMPVSAHANRALAAKHLLQQYPEVDIILSDD
                     GLQHHGLTRDFEILVQDERGVGNGWVLPAGPLREPPSRLSEVDLVVQRCEHLNKVTTD
                     TNAETSAETAEQRAAPITLAFSVALTHWQHAASGQIVAAHELKPSLTLKAPVVAVAAI
                     GVPVRFFQSISELGIDLDARFALADHKPISQDWLEQQTAGTILMTEKDAVKLPSIHDQ
                     RIWVAQTTTLWGSDDMAVFLKKQLTKSGINRLG"
BASE COUNT          330 a          431 c          447 g          371 t
ORIGIN      
        1 gagtaggcga gcggcctgag ccaatcgatc cgtgccactg gcgagctcaa cgtctgtcat
       61 gacggtttcg taaccgtgcg actgaagtgt ttgggcgatc tcggcatgat cggtggccac
      121 caccacgcga ctagcattcg actgacaggc acgttcagcg gttcgcacaa tcaggggttt
      181 gccgactaag tcggccagca tcttgccagg tagccgtgtc gaggcccaac gggctggaat
      241 gatcacaaca aaagccatgc ttgtctcgtg tggctaggtg attcagacag tcgagctagt
      301 cgcttcactg tctaggggct tggcttctga ctcgagcatt acaggaatgc cgtcatcgat
      361 ggggaacacc aacttgtccg ggcgacaaat caggccggtt ttatcggcgt tcatttgcag
      421 ccggcctttg cagatggggc aaaccaagat gtcgagcaat ttgtggtcca tttttcaccc
      481 tagacggttg atgccagatt tcgtaagctg ttttttcagg aacactgcca tgtcatcgct
      541 cccccacagg gtcgtcgttt gcgcaaccca aatacgttga tcgtgaattg aaggcaattt
      601 aacggcgtcc ttttcagtca tcagtatagt gcctgccgtt tgttgctcaa gccagtcctg
      661 actgatcggc ttgtgatcag caagtgcgaa ccgcgcatca agatcaatgc caagttcgct
      721 aatgctctga aaaaacctga caggcacgcc aatggctgcc acagccacca ccggtgcctt
      781 aagtgtgagc gaaggcttca gttcatgagc tgcaacaatc tgaccgcttg ccgcgtgttg
      841 ccagtgcgtc agtgcaacgg aaaatgcgag tgtgatgggg gcggctcgct gctcggctgt
      901 ctctgcactt gtctctgcgt ttgtatcggt agtcaccttg ttcagatgtt cgcaccgttg
      961 tacaacaaga tcaacttcag acaaacgtga tggcggctcg cgcagggggc cagccggtaa
     1021 cacccagcca ttgcctacac cacgttcatc ttgcaccaag atttcaaaat cacgcgtcag
     1081 gccatggtgt tgcagcccgt cgtcgcttag gatgatgtct acttcagggt attgctgcag
     1141 caagtgcttg gcagcaagag cccggttggc gtgagcactc accggcatgc cggttctaag
     1201 ggcaatgagc gctggttcgt cgccataggt ttgccagtct aaatgcaatc cttggccggt
     1261 cgcgggcagg gtggtttgac ggcgcccgta cccgcgactg actaggccag gcgtgtaacc
     1321 aagctcctgc agaatttgag ccaaaccaca ggtcactggc gttttgccgg tgccaccgac
     1381 gtagatattg cccaccacga caacgggtac cggcgcccga tagggtgctt tgctgcccgt
     1441 gcggtaggca tcgcgcgcct tgttggcaaa gtattgataa atcctggcca atggccaagt
     1501 ggtgtacgcc caaatgcctc ggtgttgcca ttgtcgggcg atccaagcgt gaagcttctg
     1561 tgtcattgcc atgcagctt
//
LOCUS       DATBNL010000283         2566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_172360, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000283 DATBNL010000000
VERSION     DATBNL010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172360"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1448)
                     /locus_tag="VIC30_04795"
     CDS             complement(<1..1448)
                     /locus_tag="VIC30_04795"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY7803736.1"
                     /translation="MSASHHTTAQSIDMQLATHVATVQYADLPAHTVERIATFVADTL
                     SVGMAGSSVPQARQLLNTLAATESRETRETGQTRENTGTVPIWGTRQTQTAPNAILAN
                     AFNVHCQEFDCVHEGAVVHAMATLLPVLMAEAQKRHERDRPVSGSELIAAVAVGIDAA
                     STLGLSAKNAMRFFRPATAGGFGAAAGLARLRGFDAAKVLAAWGFQLAQTSGTMQGHR
                     EGRPVLPLQVSFNARAAWQSCELAQSGIASLAAPISGECGYLPMFEGEHDIEPLMQTL
                     GKVWRIDEFSHKPYPSGRATHAGIEGLLALIQTHQLKPEQIESVVVRGPSLISRLVNR
                     PAQPEPGPNYARLCMPYVLAKVMQHGQLLPTHYGAQELADPQTFELAQRVHMQVDDNP
                     DPNAFTPVTVTVRLTSGESHQTWLEHMLASPQRPLTRQQCRDKFDQCCALAIHPPVQP
                     PNQPPNQPPDLYERIMDLASLTDVSTLVHTTH"
     gene            complement(1445..2368)
                     /locus_tag="VIC30_04800"
     CDS             complement(1445..2368)
                     /locus_tag="VIC30_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018310354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HEY7803737.1"
                     /translation="MKAFYTDHFVLPLPEGHRFPMAKYRMVREQVADLPGLRLTEAPA
                     ASDTELLLAHDPIYLQRVITGTLSPQAQREIGFPWSTDMVERSRRSVGATIAAARMTL
                     DEGISVNLAGGTHHAYRDKGSGFCVFNDAAVAARVMQRRHGVGRVAIIDLDVHQGNGT
                     ASILRNDRSIFTLSLHGEKNFPFRKEPSDLDVGLPDGCDDEQYLAALDMALEQMLDRV
                     KPELLIYLAGADPHEADRLGRLNLSFDGLRARDARVFELARSLDVGVAITMAGGYGTD
                     INNTVRVHAQTIEQALAHWHAHHSPNMETTS"
BASE COUNT          522 a          705 c          756 g          583 t
ORIGIN      
        1 taatgggttg tgtgcacaag cgtactgaca tccgtcaacg atgccaggtc cataatgcgc
       61 tcatataagt ctggtggttg gttcggtggt tggttcggtg gctgaactgg tggatgaata
      121 gccaaggcac aacattgatc gaacttgtcc cggcactgct ggcgcgttag tggccgttgt
      181 gggctggcta acatgtgttc aagccatgtt tggtgtgact caccgctagt gagtcggaca
      241 gtcacggtga cgggggtaaa cgcattcgga tccggattgt catcgacttg catgtgcacg
      301 cgttgcgcca gttcaaacgt ttgcgggtcg gcaagttctt gtgccccgta gtgggttggc
      361 aacaattgac cgtgttgcat caccttggcc aacacatagg gcatgcacag gcgtgcgtag
      421 ttgggaccgg gctctggttg cgccggacga ttgaccaagc gactgatcaa tgacggtcca
      481 cgtacgacca ctgattcaat ctgctcgggt tttagttggt gagtttgtat gagcgcaagc
      541 agcccttcaa tgccagcgtg ggttgcgcgc ccactggggt agggcttgtg actaaactca
      601 tcgatgcgcc ataccttgcc cagtgtttgc atcagtggct caatgtcatg ctcgccttca
      661 aacatgggga ggtagccaca ttcaccgcta atcggtgcag ccagagaggc aatgccgctt
      721 tgagcaagtt cgcacgattg ccaggcggct ctggcgttaa aactgacttg cagcggcagc
      781 accggccggc cttcgcggtg cccttgcatg gtgccgcttg tttgggccaa ctgaaacccc
      841 caggcggcaa gcacttttgc agcatcgaag ccgcgcaagc gcgccagacc tgctgccgca
      901 ccaaatccgc cagccgtggc gggcctaaaa aagcgcatgg cgttcttggc cgaaagccct
      961 agcgtagagg ccgcatcaat accgaccgca acggcggcga taagttcaga cccactgacc
     1021 ggtcgatcgc gttcatgtcg cttttgcgct tcggccatga gtaccggcaa tagtgtggcc
     1081 atggcatgca ccaccgcacc ttcatgcacg caatcgaact cttggcagtg aacgttaaaa
     1141 gcattggcca agatggcgtt gggtgctgtt tgcgtctgac gagtgcccca gatgggtacg
     1201 gtgcctgtat tttctctcgt ttgccccgtt tccctcgttt ctcttgattc tgtggctgcc
     1261 aaggtattta gcaactgcct ggcttgtggc acgctgctgc ctgccatgcc caccgacaaa
     1321 gtatcggcca caaatgtggc gattcgctcc acggtgtgag ctggcaggtc tgcgtattgc
     1381 accgtggcca catgggtggc caactgcatg tcgatggact gcgcggtagt gtggtgcgat
     1441 gcactcatga ggtggtttcc atgttcggac tgtgatgcgc atgccagtgt gcaagtgcct
     1501 gttcaatggt ctgcgcatgc acccgaaccg tgttgttgat gtctgtgccg tagccgccgg
     1561 ccatggtgat ggccacgccc acatcgaggc tacgggccaa ctcaaacacc cgagcatcac
     1621 gggctcgcag tccatcaaag ctcaggttca gacgaccgag acgatcggcc tcatgggggt
     1681 ctgcgccggc gaggtaaatc aagagctcag gtttgacgcg atcgagcatt tgctccagtg
     1741 ccatgtccag cgcagcaagg tactgttcgt catcgcagcc gtcaggtagc ccgacgtcaa
     1801 ggtcactggg ttctttgcga aacgggaagt ttttctcgcc atgcaaagac agcgtgaaga
     1861 tacttcgatc attacgcaaa atgctcgccg tgccgttgcc ttggtgaaca tcgaggtcaa
     1921 tgatggccac gcggccaacg ccgtggcggc gttgcatgac gcgcgcagct accgcggcgt
     1981 cgttaaacac gcagaaccca ctgcctttgt cgcgataggc atgatgcgtg ccaccggcta
     2041 gattgacgct gatgccctcg tctagggtca tgcgggccgc cgcaatggtt gcacccaccg
     2101 aacgtctgga acgctcgacc atgtccgtgc tccagggaaa gccgatctca cgctgcgcct
     2161 gtggtgatag ggtaccggtg atgacgcgtt gcaagtagat gggatcgtgg gccaacagca
     2221 gctctgtgtc agaggccgcg ggcgcttcgg ttagccgcaa gccaggcaaa tcggcaactt
     2281 gttcacgcac catgcggtac ttggccatgg gaaatcgatg gccttctggc aggggcagta
     2341 cgaaatggtc ggtataaaaa gctttcatcg cgcaagtgac cgtaaaacct taaaaacgta
     2401 gaaacgccca aacgaatctt tgcagaccac cactttaatc gcttgcaaca ctttgtgggc
     2461 aatggccttt gcccggcgct cgttggtcgc ggtcaatatc cggattgctc tgggtacttc
     2521 ggccagcatc ctaaagatca gttaatctct tcattagaag atttac
//
LOCUS       DATBNL010000284         2403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73104, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000284 DATBNL010000000
VERSION     DATBNL010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73104"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..984)
                     /locus_tag="VIC30_04805"
                     /pseudo
     CDS             complement(1..984)
                     /locus_tag="VIC30_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810256.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
     gene            complement(1335..1502)
                     /gene="rpmG"
                     /locus_tag="VIC30_04810"
     CDS             complement(1335..1502)
                     /gene="rpmG"
                     /locus_tag="VIC30_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007180630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEY7803738.1"
                     /translation="MAKGIREKIKLESTAGTGHFYTTTKNKRSTPDKMLIKKFDPVAR
                     KHVDYKETKLK"
     gene            complement(1592..1828)
                     /gene="rpmB"
                     /locus_tag="VIC30_04815"
     CDS             complement(1592..1828)
                     /gene="rpmB"
                     /locus_tag="VIC30_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018507332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEY7803739.1"
                     /translation="MARVCQVTGKGPMSGNNVSHANNRTRRRFLPNLQYRRFWVESEN
                     RWVRLRISTNALRTIDKLGIDAVLADMRARGEAV"
     gene            2035..>2403
                     /locus_tag="VIC30_04820"
     CDS             2035..>2403
                     /locus_tag="VIC30_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY7803740.1"
                     /translation="MLNPLASLVEKKLAAMPVAVRLQMPDGQWLGPKDARVEFVAKTT
                     SALKNLAAGDIGKVGEDYVEGRVEINSPMRDLMAAANALLPNSPVEAAQQGAFSAIIK
                     RLMSVWRHSIERDAKQIEFHY"
BASE COUNT          503 a          619 c          645 g          636 t
ORIGIN      
        1 tgagtgggtg aacaacatgt agtccggtgt ccctgccttc tttgtcacgg gtcgctagct
       61 cggcctcggt ttgtccgcct tgcaggcagc gctcgataaa agccgccaat tcggggttcg
      121 ttgaggcggc gtgcgcggcc aggggtgttc aggtgccaca gcacaaaacg tcacgcccat
      181 gatggtgtca gcgcgggtcg taaaaacgaa catttgtccg tcatctatta atttgccttc
      241 gccgtcatga atgtcatgat caaaagcaaa ccgcacgccc tcgcttttac cgatccagtt
      301 ctcttgcatg gcacgcacac gatcgggcca gccgtcgagc ttgtctttga caaacgagag
      361 caactcttcg gcatagtcag tgatccgcag gtaatagcca ggtatttcgc gcttctcgat
      421 cacagcgccc gagcgccagc cacatccatc gatgacttgt tcattggcca gcacggtttt
      481 gtcgaccggg tcccagttca ctacctgtgt tttgcggtaa gcaatgcctt tttccagcat
      541 ttttaggaag agccactggt tccacttgta ataactcggg tcacaggcgc acatctcgcg
      601 tgaccagtcg atggccagtc ccattgattt catctgcttg cgcatgtaat cgatgttgtc
      661 gtacgtccac ttggctggag ggacgccaga cttcatggcg gcgttttctg ctggcatacc
      721 gaatgcatcc caccccatgg gcatcaacac attaaagccc ttcatgcgca actgtcgcgt
      781 catcatgtca ttgatggtgt agttgcgtac atggcccatg tgtagcttgc cgcttgggta
      841 gggcagcatg gagcatgcat agtatttggg cttgggattg ccgtgggcgt ctttggtatc
      901 ttcaaagacg gcgtaggcgt tttgtgcatt ccaggctgtt tgtgcctgtg cttctacatc
      961 ggtgggttcg tagcgttcct gcatgagtct tctttatgtt gagtagagag ccgcgtatgc
     1021 gtcaaatggt ccacacgtgc ggtgcgggca gaactccgca atccccatta taggtaacat
     1081 gcgacgcgtg gctttgcgta gggatgtcgg ttatcgcgtg atgggccaat cccggttgcc
     1141 aacacaatgc gccgggtctg tgtgtcggtt ctgtttcaaa gcttggcagc cacaaacaaa
     1201 ccaaagaaaa accccacttc gatatcccga gtggggctca acttctgtct caagcgctgt
     1261 tcaataactt ccaaaataca gtaacgctga cctgggtaac cgcaccagtt ggctgaacgt
     1321 ttttggctga agatttactt cagcttggtt tctttgtagt caacgtgctt gcgagcgact
     1381 ggatcaaact ttttgatcaa catcttgtca ggcgtgctgc gcttgttttt ggtggtcgtg
     1441 tagaagtgac cggttcctgc ggtcgattcc agcttgattt tttctcgaat gcctttggcc
     1501 atgtcttaat ctccgtgatg tctgcgacag cgattcgcta agtgacggat cccttatggc
     1561 gaaccgcctt cttaggctgc taaacccgtt gttaaaccgc ttcgcctcga gcgcgcatgt
     1621 cagccaacac cgcatcaatg cctagcttgt caatggtgcg aagtgcgttg gtgctgatgc
     1681 gcaaacgcac ccagcggttc tcgctctcaa cccaaaagcg gcggtattgg agatttggca
     1741 gaaaccggcg ccgcgtcctg ttgttggcgt gagagacgtt gttgcccgac atcgggcctt
     1801 ttcctgttac ttggcataca cgtgccatgg tcgcacctta tttcgatggg gcagggatgc
     1861 aataaacatc tgccggttca gtagtaagcc agagatgata ccgcgttttc gtgtcatttg
     1921 gcaagctatc gatgtcaatt tgatctcaaa ggtggcgtgg ttacatcagt cagttttctg
     1981 gcaccacaaa atcttataca ttttgagcgt tgttgatttt atctcaggag attgatgttg
     2041 aatccactgg ctagcctagt cgagaagaag cttgcagcca tgcccgttgc cgtcagatta
     2101 caaatgccag atggtcaatg gctcggcccc aaagatgctc gcgttgagtt tgtggctaaa
     2161 accacaagcg ccctgaaaaa cctggccgcc ggcgatatag ggaaggtagg ggaggattat
     2221 gttgagggtc gggttgaaat caacagcccg atgcgtgact tgatggctgc agccaatgcg
     2281 ctattgccca acagtccggt cgaagcagcc cagcagggcg ctttcagcgc gattatcaag
     2341 cgtttgatgt ccgtctggcg ccattcgatc gaacgcgacg ccaaacaaat cgaatttcat
     2401 tac
//
LOCUS       DATBNL010000285         3110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192347, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000285 DATBNL010000000
VERSION     DATBNL010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192347"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="VIC30_04825"
     CDS             <1..1047
                     /locus_tag="VIC30_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011806859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7803741.1"
                     /translation="RAQMAKIREGQERLYNPLPQFHVNASILSFFCMMLTGGCQIQAE
                     RFQPTRWWTDIRATDATIVHYLGVVVSMLLNQPVTEAERSHRIRFGFGAGVEPELHAR
                     FEQRFGFPLLEIWGMTEIVRVLVDNGPNRQVGTRAFGKAMPGLQVRVADHAGQEVADG
                     EVGEMLVRHSEAQPRKDFFSGYFDDPHATEAAWQGGWFHTGDMVTRDAHGMLHFVDRR
                     KNIIRRAGENIAAAEVEAVLLTHPLVEQVAVMAVDDPLREQEVLACVVLKPEDPNTEL
                     GLVRVRRDVAKQLFEFCMARLAYYKAPGYVVFREEIPTTGTQKIQKHRIFEQGTDPLA
                     DPLLVDLRDQKKRD"
     gene            1163..2404
                     /gene="kch"
                     /locus_tag="VIC30_04830"
     CDS             1163..2404
                     /gene="kch"
                     /locus_tag="VIC30_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HEY7803742.1"
                     /translation="MSNYPHQSIAQTGLRHLIRQINEYVPVILALLVAISGLSLIYPL
                     VHRVWLGEHHQWFDQLSWREVIDTIGLIELPRVFMGFCLLLMSIGLAMRARLAWTFSL
                     MVFALALATTIYADFWVATTKILYDLVVVVLLIRYWSMFDRSSLAAGSLFAVASVVSL
                     ICYAMLGTVYLGDQFTPKVHDLPDAAYFSVVAMSTVGFGDIVPTTHTAKMFVVSVIVL
                     GITVFATSLGAVVGPLVSGKLRQMFREKARVSMRKNHVILCGATPLALSLYRSLTAKG
                     EFVTVVLKPGVTHEYPETADLLWGEASSGDVLKQAGVDEASYVLALREDDPDNAFIVL
                     AVKSFTNSKAKTVAVVNASQNLEKIRRVNADMVFSPQLLGAELLARAMTGQPLDGSLI
                     SELFFAKPIPAAAEPAAAAKT"
     gene            2558..>3110
                     /locus_tag="VIC30_04835"
     CDS             2558..>3110
                     /locus_tag="VIC30_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006221755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY7803743.1"
                     /translation="MTQSVTNIAAYHFTDLTDLPVWRERVLNQTTALELKGTVLLAHE
                     GINLFLAGSKGGIETFLSWLRGLEPFAGLKVKYSESDEVPFKRLKVKIKNEIIRMNHP
                     AIHPAEGRAPAVEPATLRRWLQTGQDDAGRPVVMLDTRNDFEVQAGTFKDAINWHIER
                     FTQFPEAVQEHMDELEGKTVVSFC"
BASE COUNT          667 a          764 c          893 g          786 t
ORIGIN      
        1 cgcgcacaga tggccaaaat tcgcgaaggg caggaacgtc tctataaccc cttgccgcag
       61 tttcacgtca atgcctcgat tttgtcgttc ttttgcatga tgctcaccgg cggatgtcaa
      121 atacaggcag agcggttcca gccaacgcgt tggtggaccg atattcgtgc aacggatgcc
      181 acgattgttc attatctggg tgtcgtggtg tcgatgttgc tgaatcagcc ggttaccgag
      241 gccgagcgct ctcaccgtat acgatttggg tttggcgcgg gggttgaacc tgagctgcac
      301 gccagatttg aacagcgatt tggctttcct cttttagaaa tctggggaat gacggagatt
      361 gtgcgggtgc tcgtagacaa cggccccaat cggcaagtgg gtactcgagc gtttggcaag
      421 gccatgccgg gacttcaggt gcgtgtggct gaccacgcgg gccaagaggt tgctgatggc
      481 gaggtcggcg agatgctggt gcggcacagt gaggcgcagc cccgaaagga tttcttcagt
      541 ggttacttcg atgatccgca tgcaaccgag gctgcctggc aaggggggtg gtttcacacc
      601 ggcgatatgg ttacccgcga cgcgcatgga atgttgcatt ttgtggatcg ccgcaagaac
      661 atcattcgac gggctggcga gaacattgca gcagccgaag ttgaagcggt gttgttgaca
      721 catccgttgg ttgagcaagt tgcggtcatg gctgtagatg acccgttgcg cgagcaagag
      781 gttttagcgt gtgttgtgtt aaagcctgaa gacccaaata ctgagctggg attggtacga
      841 gtacgccgtg atgtggccaa gcaactgttt gagttctgca tggcgcgttt ggcctactac
      901 aaggcccctg ggtatgttgt tttccgagaa gaaattccaa cgacaggtac tcagaagata
      961 cagaagcacc gcatttttga gcaaggaact gatccgctgg ctgacccctt gcttgttgat
     1021 ctgcgagatc aaaagaaacg cgattgagtg tctgcggcgt atacttccgg tcataacgag
     1081 agttgtgggg aaaagcgtac actaagccct ctacgtatag cgccccattg gtatgggtgt
     1141 ccgatggttc cctcttaaga aaatgtccaa ctatccgcat cagtcgatcg ctcagacggg
     1201 cttacggcac ttgatccgtc aaatcaacga gtatgtgcct gtcattctgg ctttgttggt
     1261 tgctatcagt ggtctgtctc tgatttaccc actggtgcat cgtgtttggc tcggtgagca
     1321 tcaccagtgg tttgatcaac tgtcttggcg tgaagtcatt gacaccatcg gcttaattga
     1381 actcccacgt gtattcatgg ggttttgttt attgctgatg tcgattggtt tggccatgcg
     1441 cgcgcgcctg gcctggacat ttagtttgat ggtgtttgcg cttgcgcttg ccaccacgat
     1501 ctatgccgat ttttgggtgg ccaccacaaa aatcctctat gacctggtgg tcgtggtgtt
     1561 actgatccgc tattggtcca tgtttgatcg cagcagcttg gcggcgggat ctttgtttgc
     1621 agtggctagt gtggtgtcac tcatctgtta tgcgatgctg ggcacggttt acctcggtga
     1681 ccagttcacc ccaaaggtgc acgatctgcc cgatgcggcg tatttctctg tggtggccat
     1741 gtcgacagtc ggctttggcg atattgtgcc gacaactcac accgccaaaa tgtttgtggt
     1801 ctcagtcatt gtgttgggca tcacggtgtt tgctacatca cttggagccg ttgtcgggcc
     1861 attggtcagt ggcaaactac gtcaaatgtt tcgggaaaaa gcgagagttt ccatgagaaa
     1921 aaatcacgtg atcttgtgcg gcgcaacgcc attggcgttg agtctttatc gcagcctgac
     1981 tgccaaaggc gagttcgtca ccgttgttct caagccaggc gtgacgcatg agtaccccga
     2041 gacagcagat ttgctgtggg gtgaagcatc aagcggcgat gtgctcaaac aggccggcgt
     2101 agacgaggct agttacgtac tcgcgttgcg tgaagatgac cccgataacg cgtttatcgt
     2161 tctagctgtc aagtcgttta ccaatagcaa agctaaaacc gtggcggtgg tcaacgccag
     2221 ccagaacctc gaaaaaatcc gacgggtcaa cgccgacatg gtgttctcgc cgcaattgct
     2281 cggtgccgag ctgctcgcac gcgccatgac aggccaaccg ctagatggct cactgatttc
     2341 tgagctgttt tttgccaagc ccataccggc tgcggccgag cccgctgcag cggcaaagac
     2401 gtaaggtgta ggcttagggt gtaggtttag gcttaaagta aagatttgca gcaaagattt
     2461 acggcaaatc cctgctgcgc acttttgcat ttccgcgttt tgtacttgca cacgttcaac
     2521 gtctgatacg acctcagttc cccactatcc caacgttatg acccaatctg tgaccaatat
     2581 cgctgcctat cacttcactg acttaacgga cttgcctgtc tggcgcgagc gtgtgctcaa
     2641 ccaaaccaca gcgctcgaat taaaaggcac cgtgctgctc gcgcacgagg gtattaacct
     2701 gtttctggcg ggatccaagg gcggtattga aacgtttctg agttggctgc gcgggcttga
     2761 gccttttgcg ggtttaaagg tcaagtacag cgagtctgac gaagtgccgt ttaagcgtct
     2821 gaaagtcaaa atcaagaatg aaatcatccg gatgaatcac ccggcgattc atccagccga
     2881 gggtcgcgcg ccggcagtcg aaccagctac cttgcggcgt tggcttcaga ctggccaaga
     2941 tgacgccggc cggcccgtgg tgatgctcga tacgcgcaac gattttgagg tgcaggccgg
     3001 cacattcaaa gatgccatta actggcatat cgaacgattt acgcaatttc ctgaggctgt
     3061 gcaagaacac atggatgagc tcgaaggtaa aaccgtggtg agcttttgca
//
LOCUS       DATBNL010000286         3079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_152852, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000286 DATBNL010000000
VERSION     DATBNL010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152852"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VIC30_04840"
     CDS             <1..903
                     /locus_tag="VIC30_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011349829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclohexanone monooxygenase"
                     /protein_id="HEY7803744.1"
                     /translation="WREEAKKTPFGIAGHPPPEKLAAQDSFEQRQRLFETKWNTGGNI
                     SFLYAYKDLLTDEQANAMACEFVHDKIRATVKDPEVAELLIPNDHPIGTKRLCLDTGY
                     YETYNRDNVTLVNVRKAPIEKITPDGLSTSDGEYKVDDLIFATGYDAMTGAILDIDIR
                     VKDGAALRDAWKDGPKTYLGVMVNGFPNMTIITGPGSPSVKTNMISAIEQHVDWITDL
                     VTHMTERAKVKFEAQPDAQEKWVQHVNEVADSTLYPKANSWYVGANIPGKPRVFMPYV
                     AGLDKYRKICDDVASQGYEGVSIQ"
     gene            complement(1038..2336)
                     /locus_tag="VIC30_04845"
     CDS             complement(1038..2336)
                     /locus_tag="VIC30_04845"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY7803745.1"
                     /translation="MDKLHELSVHEAVVQISQGTLKPSQLVAAYVEQIARLEPDVGAF
                     VHLDVDAALRKARALDTMAPAGLLCGVPIGVKDIIETADMPTGYGSPIYAHHQPAADA
                     ACVNEVRANGAVVMGKTVSTEFAIFHPGKTANPHHLAHTPGGSSSGSAAAVGAGMVPL
                     AFGTQTAASVFRPASFCGVVGYKPSYGLIQRGGVKTLSEAFDTVGLMGRCVKDVALFA
                     AAASRRHALIPEASSAGAKPTVGLFRTAHWDEADEASQAAVLGFAQRMSKCGHRVQEL
                     VVPAVFGDLLQAQTDVMLAQAAIALGYECTHHASKCSDKLLEVWEAGNAVSDQRLQEA
                     VNTISAAQAAAKDLFAQVDVLLSPAAPGEAPRGLQATGDPVFGRSWSALGTPGLTVPG
                     ATGPNGLPIGVLLCGALNQDRKFLAAAFALEQSYKASLDH"
     gene            complement(2372..>3079)
                     /locus_tag="VIC30_04850"
     CDS             complement(2372..>3079)
                     /locus_tag="VIC30_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015603915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7803746.1"
                     /translation="WVLNGAKQFITNGKRAKLAIVFAVTDPDQGKRGISAFLVPTDAP
                     GFVVNRVENKLGIRGSDTCAITFEDCRIPEHNMLGPRGKGLAIALSNLEAGRVGIAAQ
                     AVGIAQAAFEQALRYARERVQFDVPIIEHQSVANMLADMQVQLNAAQLLTLKAASMRD
                     AGLPCLSEASQAKLYASEMAETVCSKAIQIFGGYGYLADYPVERYYRDARIAQIYEGT
                     SEIQRLVIARALKQMAL"
BASE COUNT          711 a          940 c          814 g          614 t
ORIGIN      
        1 tggcgtgaag aagccaaaaa aacacccttt ggtattgccg gccatccgcc accagaaaag
       61 ctcgcagccc aagacagctt tgagcaacgc cagcggctgt ttgagaccaa gtggaacacg
      121 ggtggcaaca tcagtttcct gtatgcctat aaagatctgc tgaccgacga gcaagccaac
      181 gccatggcct gcgaattcgt gcacgacaaa atccgggcca ccgtcaaaga tcctgaggtc
      241 gctgaactac tgatcccaaa tgaccaccca atcggcacca aacgtctgtg tcttgatacc
      301 ggttactacg aaacctacaa ccgggacaac gtcacactgg tcaacgtgcg caaagctccc
      361 atcgaaaaaa tcacgccaga cggcttgagc accagtgatg gtgagtacaa ggttgatgac
      421 ctgatttttg cgacaggcta cgatgccatg accggcgcga ttctcgatat tgacatccgg
      481 gtcaaggacg gcgctgcgct gcgcgacgcc tggaaggatg gtcccaagac ctatctcggt
      541 gtaatggtca acggttttcc gaacatgacc atcatcactg ggccgggtag tccaagcgtt
      601 aaaaccaaca tgatctcagc catcgagcag cacgtggact ggatcaccga tctggtcacc
      661 cacatgactg agcgggcaaa ggtcaaattc gaggcgcaac ccgatgccca agagaagtgg
      721 gtgcaacacg tcaatgaggt tgctgacagt accctctacc ccaaggccaa ttcctggtat
      781 gttggcgcca acattccagg caaaccacgg gtgtttatgc cctacgtcgc gggtctagac
      841 aagtaccgta agatctgcga tgacgtagcg agccagggct acgaaggcgt ctcaatccag
      901 tagcaagggt ttgtcgcaaa cgacatgggc cgcgaaccaa agtccgcggc ccatgtcgtt
      961 tctgtacctc actacaacaa ccgagtgcag caactcacta caacaatcca ctgcggcgct
     1021 acaacgcaac catgcattca gtgatcgaga cttgccttgt acgattgctc taaagcaaag
     1081 gcggcggcca gaaactttcg atcctgattc agtgcaccgc acaacaacac acctatcggt
     1141 aacccgttgg gcccggtggc acccggtacg gtcaggcctg gcgtaccaag cgctgaccaa
     1201 ctgcggccaa acacaggatc acccgttgcc tgcaaaccgc gcggcgcttc acccggtgcg
     1261 gccggtgata acaacacgtc aacttgggcg aacaggtctt tggccgcggc ctgcgccgcg
     1321 ctgatggtgt tgactgcctc ctgcagtcgc tgatcactga ccgcgttgcc agcctcccat
     1381 acctcaagca acttgtccga gcacttcgat gcatggtggg tacactcata acccaacgca
     1441 atcgcggctt gcgcgagcat cacatcggtt tgcgcttgca gcaaatcccc aaacaccgcc
     1501 ggtaccacga gttcctgcac ccgatgcccg cacttgctca tgcgttgggc aaatccgagc
     1561 actgccgcct gcgaagcctc atctgcctcg tcccagtgtg ctgttcgaaa caaacccaca
     1621 gtaggcttgg caccggcgct gctcgcctca gggatcaagg catgacgacg actagctgcg
     1681 gcggcgaaca aggccacgtc tttgacacac cgacccatga ggccgacggt gtcaaatgct
     1741 tccgataagg tcttaacccc gccacgttga atcagaccat acgacggctt gtagcccacc
     1801 accccacaaa acgaggccgg ccgaaacacc gatgcggcgg tttgcgtgcc aaatgccaat
     1861 ggcaccatgc cagcacccac cgctgcggct gatccactcg atgagcctcc gggggtatga
     1921 gccaaatgat gcggattggc cgttttgccg ggatgaaaga tggcgaactc ggtactcacg
     1981 gttttaccca tgaccaccgc tccgttggcg cgtacttcgt tgacgcaggc cgcatcggcg
     2041 gcaggttgat gatgggcgta aatgggcgaa ccgtaaccgg ttggcatgtc agccgtctcg
     2101 atgatgtctt tgacaccaat cggcacacca catagcaggc ctgccggtgc catcgtatcg
     2161 agtgctctgg ctttgcgcag cgctgcatcg acatcgaggt gcacaaaagc accgacgtca
     2221 ggttcaagtc gcgcaatctg ctcaacgtag gccgccacca actgcgacgg tttcaatgtg
     2281 ccctgcgaga tttgtacaac tgcctcgtgc acagaaagtt cgtgcagttt atccatcacc
     2341 cactccttgg atttgtgtga ctgagtgata gctaaagcgc catctgtttg agcgcccgcg
     2401 caatgaccag tcgttgtatt tcgctcgtgc cttcgtaaat ttgtgcaatg cgcgcatcgc
     2461 ggtaataccg ttcgaccggg tagtctgcca aatagccgta accgccaaag atctgaatgg
     2521 ctttactgca cacggtctcg gccatctccg aggcgtatag ttttgcctgc gatgcttcag
     2581 acaggcacgg tagccccgcg tcgcgcatgc ttgcggcttt gagcgtcaac agctgcgcgg
     2641 cattcagctg cacctgcatg tctgccagca tattggccac gctttgatgc tcgatgatgg
     2701 gcacatcaaa ttgcacacgc tcgcgggcat agcgcagtgc ttgttcaaag gccgcctgtg
     2761 caatgccgac cgcctgcgcg gcaataccca ctcgccccgc ctcaagattc gacaaggcta
     2821 tggcgaggcc cttgccgcga gggccgagca tgttgtgctc gggtatacga caatcttcaa
     2881 aggtgatcgc gcacgtatcc gagcctcgaa tcccgagctt gttttccaca cggttcacca
     2941 caaaccccgg ggcgtcggtg ggcaccaaaa acgccgaaat ccctcgcttg ccttgatccg
     3001 gatcggtcac ggcgaagacg atggcaagtt tggcccgttt gccattggtg ataaattgct
     3061 tagcgccatt taagaccca
//
LOCUS       DATBNL010000287         1585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192380, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000287 DATBNL010000000
VERSION     DATBNL010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192380"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..886)
                     /locus_tag="VIC30_04855"
     CDS             complement(<1..886)
                     /locus_tag="VIC30_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008904308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803747.1"
                     /translation="MSTSSAASPSGTSAARQYALVTSAYWSFTLTDGALRMLVLFHFY
                     QLGYSPFTLAFLFLLYEAAGIVANLVGGWLATRFGIARMLVVGLCTQITGFMLLSALS
                     PDWSATLSVVWVVIAQGVCGVAKDLTKTASKSAIKITAGQASGQLFKWVAWFTGSKNA
                     MKGVGFFMGGVLLQYLGFSGALWLMAGLLCLVLIGVLRLLPPMLGKSKASKSAKELFA
                     KSKGINLLAAARVFLFGARDVWFVVGVPVYLYAAGWTFSMVGGFLAVWTIGYGFVQAI
                     APQLVKRSEDGLTEEVPAA"
     gene            complement(890..>1585)
                     /locus_tag="VIC30_04860"
     CDS             complement(890..>1585)
                     /locus_tag="VIC30_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011829185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEY7803748.1"
                     /translation="LEGHLKRGAKRVVVAAPVKVGGVLNIVFGINHDKYEPSRDQIVT
                     AASCTTNCLAPVVKVVHDNFGIRHGQITTIHDPTNTNLMVDAVHKDLRRARSAMLSLS
                     PTTTGSATAIALIYPELAGKLNGHAVRAPVLNASLTDAVFELQKPTTAETVNALFQEA
                     SEGALAGILGFEDRPLVSIDYAQDTRSSIVDGLSTMVTDGTMLKVYAWYDNEMGYACR
                     MVDLACYMDSLGL"
BASE COUNT          423 a          473 c          389 g          300 t
ORIGIN      
        1 gcgccgccgg cacctcttcg gtcaatccgt cttcgctacg tttgaccagc tgcggggcaa
       61 tggcctgcac aaaaccataa ccaatggtcc agaccgccaa gaatccgccc accatgctga
      121 acgtccagcc cgcagcatag agatacaccg gcacaccgac gacaaaccac acatcgcgcg
      181 caccaaacaa aaacacacga gcggccgcca gcaagttaat acccttgctt ttagcaaaaa
      241 gctccttggc agactttgac gctttgctct taccaagcat gggcggcaac aggcgcagca
      301 cgccgattag taccaaacac aacaaaccgg ccatgagcca caatgcccca gagaacccga
      361 ggtactgcaa caacacgcca cccatgaaaa aacccacgcc tttcatggca tttttactgc
      421 cggtaaacca agccacccat ttgaacaact gaccgctggc ttggccagcg gtgatcttaa
      481 tggcggactt acttgcagtc ttagtgagat ctttggctac accgcatacg ccttgcgcaa
      541 tcaccaccca gaccaccgac aaagtggcag accaatctgg cgataacgca gacaacaaca
      601 taaagcccgt aatctgtgtg cacaaaccca ccaccaacat gcgggcgata ccaaagcggg
      661 tcgcaagcca cccaccgacc aagttagcca caatgccagc agcttcgtag agcaagaaca
      721 gaaacgctag agtgaatggt gaatacccga gttggtagaa gtgaaacaac accaacatgc
      781 gcagcgcgcc atcggtgagc gtaaagctcc aataggccga agtgacgagt gcgtactggc
      841 gtgccgccga ggtgcctgaa ggcgatgctg cagatgaggt tgacatgggt tagagaccta
      901 gcgagtccat gtagcaggcc aaatccacca tgcggcaggc ataacccatt tcattgtcgt
      961 accaagcgta gaccttaagc atcgtgccat cggtgaccat ggtcgataaa ccatcaacga
     1021 tcgagctgcg cgtgtcttgc gcataatcga tactgaccaa gggtcggtcc tcaaacccca
     1081 agataccggc caacgcccct tcagaggcct cttgaaacag ggcgttgact gtctctgctg
     1141 tggttggctt ttgtaactcg aacaccgcat cggtgagcga tgcatttaag acaggcgcgc
     1201 gcacggcatg gccgttaagc tttccagcta gttcaggata gatcaatgca atcgccgtgg
     1261 cgctgcctgt ggtggtgggc gataggctca acatggcact gcgcgcacgc cgcaagtcct
     1321 tgtgcacagc atcaaccatg aggttggtgt tagtcggatc atgaatcgtg gtgatctgac
     1381 cgtgacgaat cccaaagttg tcatgcacga ccttgaccac cggcgccaag cagttggtcg
     1441 tgcacgaagc tgctgtcaca atttggtcgc gacttggctc gtatttgtcg tgattaatgc
     1501 caaacacaat attcaacaca ccaccgactt ttactggcgc tgcaacaacc acacgcttgg
     1561 caccacgctt taagtgacct tcaag
//
LOCUS       DATBNL010000288         3848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_53315, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000288 DATBNL010000000
VERSION     DATBNL010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53315"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VIC30_04865"
     CDS             complement(<1..340)
                     /locus_tag="VIC30_04865"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY7803749.1"
                     /translation="MATTIADRVDHECTISFTPLHRTFMAQASAVDLRAVTDESSLAT
                     IRAGMARYGVLVFKGQQFTGQQQVAFAQRLDGELHRKTSSAVIAKNRYGDEALTDISN
                     VDGDGSILSAE"
     gene            620..1966
                     /locus_tag="VIC30_04870"
     CDS             620..1966
                     /locus_tag="VIC30_04870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEY7803750.1"
                     /translation="MSSSNTVTQIRTGPIGQTLWRLSLPNVISNVLLTLVTVADAWFV
                     SRLGTTALASLAIVFPFQVLMQMFGNGAIGGGIASALSRALGAKRQLDADALARHALL
                     IGGVMLLGFVIVLGLFARHVFTWLGADGEALEGAVRYATVTFGAASAVWLFYAMFAIY
                     RGTGHMAVPARALVISSIVQIVLSGGLTLGWGPLPSLGIVGPGVAFIVSQGGTGLALF
                     LLARNGRLGIHIRPGPIRWQPIATIMRVGGLGMVNSLTIVFAVVVVTSLVGQYGTAAL
                     AGYGLGSRLELMLVPLAFGIGGALTTAVGINMGAGQYQRARDFAWFGAKVSAVILGPL
                     GILLAIVPGLWTGLFTSDTDALYYATQYLHIVAPLYGVFFVGQTLYFASQGTGRMAIP
                     VSIGVLRLLTVSGIGLLAGSLQAPLWVVFMGVALGMTVIGVGMTASLLGPAWRAPH"
     gene            2246..2557
                     /gene="tnpA"
                     /locus_tag="VIC30_04875"
     CDS             2246..2557
                     /gene="tnpA"
                     /locus_tag="VIC30_04875"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEY7803751.1"
                     /translation="MFADFGAKADQVHLLVDIHPALNISALINNLKSASSKRVRAKHW
                     NWLRQFYDKPVLWHRAYYAGSVGNVSLETVKHYVQSQGEDMRRKASSRTPPAWPPPNP
                     A"
     gene            complement(2554..3309)
                     /locus_tag="VIC30_04880"
     CDS             complement(2554..3309)
                     /locus_tag="VIC30_04880"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7803752.1"
                     /translation="MMVAGLGGVATYWTPQIQAFSHDYRVIVHDQRGTGRSSQIPVQS
                     VEQMAEDALAVMDAAGVDRTLYLGHSTGGAIGVALALKHPDRISGLVINASTTHGDAY
                     RHKLLGLRKTLLEMGRPDAYASYTTLLLYPHWYINQNHERLVEQESKAVQTLGNAQAQ
                     ASRLDAILNFDPRDMLSRLEVPTLVLCARDDILTPLYFSEEYAALIPNAELSILETGG
                     HAASHTVTAEYNQVIQRFFERLGRASPLLNPQA"
     gene            complement(3384..3770)
                     /locus_tag="VIC30_04885"
     CDS             complement(3384..3770)
                     /locus_tag="VIC30_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015867600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEY7803753.1"
                     /translation="MAHIPIIPAGSAPPLAPYSPGVRVGNTIYVSGMLAMDKDGRSVG
                     IGDVAVQTRHVLESVKAVVQAGGASMSDIVYNAIILKDLSDYAAMNKIYAEYFPTNPP
                     ARYCIRADLVKPEFLVEITSIAYLDS"
BASE COUNT          807 a         1063 c         1069 g          909 t
ORIGIN      
        1 tctcggcact caaaatgctc ccatcgccat cgacgttgga aatgtccgtt aacgcctcgt
       61 cgccgtagcg attttttgcg atgacggccg atgaggtttt acggtgcagc tcgccatcca
      121 aacgctgcgc aaatgccacc tgttgctgcc cagtgaactg ctgtccctta aagactagca
      181 ccccatacct agccatacca gcccgtatag tcgctagact cgactcgtca gtgactgcac
      241 gaaggtcaac ggcactggct tgcgccatga aggttcgatg caagggcgtg aaagaaatgg
      301 tgcactcgtg gtcgacccga tccgcaattg tcgttgccat tgttttgcct cattttttgt
      361 taggacaacc ttgaattgct tttagcgcat tggcgcgact catggcaact ggcaccgcac
      421 taaacaccgc ctgcagccgt cgaccgtgtc tggacgatgc cctcacgcgg tgcagcaaag
      481 tgattcagcc aatgcccttg cgcttgcgta cactacgcga acacatcgcc aagcgacaac
      541 accctgtgcg cccatcaccc aaggcttttg atggacaggc tgctttggcg gtgcttcaaa
      601 caattgagca caaaaaccaa tgtcaagcag caacacggtc acacaaatta gaactgggcc
      661 gatcggccag accctgtggc gactatcgtt gcccaatgtg atttcgaacg tgctgctcac
      721 gctcgtaact gtcgccgatg cctggtttgt ttcacgcctg gggacaacgg cgctggctag
      781 cttggccatt gtgtttcctt tccaggtgct aatgcagatg tttggcaatg gtgccattgg
      841 cggtggcatt gcttcggccc tgtcgcgtgc attaggtgcc aagcgacaac tagatgctga
      901 tgcactggca cggcatgcgc ttttgatcgg cggtgtgatg ttgctcggat ttgtcatcgt
      961 gctgggcctg ttcgcacggc atgtctttac ctggctaggt gctgatggcg aggcacttga
     1021 aggtgcggtt cgctatgcca ccgtgacatt tggcgctgcc agtgccgtat ggcttttcta
     1081 cgccatgttc gcgatctacc ggggtaccgg ccacatggct gtgccagcaa gagcgttggt
     1141 tatttcttca attgtccaaa tcgtcctgtc aggtggcttg actttgggtt ggggtccatt
     1201 gccgtcactt ggcatcgtcg ggccgggagt ggcctttatc gtcagtcaag gcggcaccgg
     1261 cctagcgctt tttttgctgg cccgcaacgg caggctgggc attcatattc ggccaggccc
     1321 cattaggtgg caacccatcg ccacgattat gcgcgtgggc ggattaggca tggtcaacag
     1381 cctgacgatt gtttttgcgg tggtagtcgt cacgagcctt gtcgggcaat acggtacagc
     1441 agccttggcg ggatacggct tgggcagccg gctcgaactg atgctagtgc cgctggcttt
     1501 cggtattggg ggggcgttaa caaccgcggt tggaatcaac atgggagcag gccaatatca
     1561 gcgtgccaga gacttcgcgt ggtttggcgc caaggtatcg gcagtcatct taggcccgct
     1621 tggcattttg cttgccattg tgcctgggct atggaccgga ctattcacct cagacaccga
     1681 cgccctctat tacgcgaccc aatacctgca catcgtcgcc ccactgtatg gtgttttctt
     1741 tgtgggccag acgctctact tcgcatccca aggcacgggg cgcatggcca tccccgtgag
     1801 cattggggtg cttagactgc tgacggtcag tggcattggc ttactggccg ggtcgctgca
     1861 agcgccacta tgggtcgtgt ttatgggtgt ggcgcttggc atgacggtca tcggtgtcgg
     1921 catgaccgcc tccctgcttg ggccagcatg gcgagcacct cattagtccg tgcgttttag
     1981 gtgaatgcaa catcacgcct agccctttct atctaaaaag ccagaaatga catagccctg
     2041 cgctaagaat ccttgctcat gggtggaatt gctcaggtcg aattgctaaa aacgaaacat
     2101 ttgcgattgt tgctcatgtc tgacctaggg gcgcgccgaa cgtcactggc gtaacctcgg
     2161 tgatgcaatg gctgtaccgc tgatcctagg gagcgaactg tccgacgtgg gcaagtgact
     2221 tgcacgcgaa ggcctgaaag taccgatctt cgctgacttt ggcgccaagg ccgatcaggt
     2281 gcatttgctg gtcgacatcc atccggcgct caatatctca gcgctgatca acaacctgaa
     2341 gtcggctagc tccaagcgag tgcgtgcgaa acactggaat tggttacgcc agttttatga
     2401 caaaccggtg ctctggcatc gcgcctatta cgcgggctcg gtcggcaatg tgtcactaga
     2461 gactgtcaag cactatgtgc aatcgcaagg cgaggacatg cgccgcaagg cgtcctcccg
     2521 gaccccgccc gcttggcccc ctcctaaccc cgcctaagcc tgcgggttca gcaaggggga
     2581 tgcgcggcca aggcgttcaa aaaaacgctg gataacctga ttgtattcag cagtgaccgt
     2641 gtgagacgca gcatgaccac cggtctcgag gatgctgagt tccgcattcg gtatgagcgc
     2701 cgcgtactct tcagaaaaat acagtggcgt cagaatgtca tctcgcgcgc agaggaccaa
     2761 ggttggtact tcaagtctgc tgagcatgtc gcgcggatca aagtttaaga tggcgtctag
     2821 ccggctcgct tgagcttggg cattgcccaa tgtttgcaca gctttgcttt cctgctcgac
     2881 caaccgttca tggttctgat tgatatacca atgtggatac agcaacaacg tggtgtaact
     2941 cgcataggca tcggggcgtc ccatttctaa aagtgtttta cgcaaaccca gcaatttgtg
     3001 ccgataggca tcgccatgcg tggtgctggc gttaatgaca agaccgctaa tacgatccgg
     3061 atgcttcagc gctagcgcca cgccgatcgc ccccccagtg gagtgtccca aatagagtgt
     3121 gcggtcaaca ccggccgcgt ccatgaccgc gagtgcgtct tcggccattt gctcgacgga
     3181 ttggacaggt atctgactcg atcgacccgt gcccctttga tcatgaacaa tcacgcgata
     3241 gtcgtgacta aaggcttgga tttgaggtgt ccaataggtc gccactccgc cgagccccgc
     3301 gaccatcata agatgcgctc cgtgaccctc ggcctcccag taaatacttg ctccatcatg
     3361 ctcgattgtt gccatgaccg aggttaacta tctaggtaag caattgacgt aatctcaacc
     3421 agaaactctg gtttaaccag atcagcgcga atgcagtagc gcgccggtgg attggttggg
     3481 aagtactcgg catagatctt attcatggca gcgtaatccg ataggtcctt aagaatgatg
     3541 gcgttataga cgatatcgct catcgacgcg ccaccagcct gcacaaccgc tttgacactt
     3601 tcaagaacat gccgtgtttg tacggcgaca tcgccaatgc caacagaccg cccgtccttg
     3661 tccatggcaa gcatgccaga gacataaatg gtgttaccaa cgcgcacacc aggcgaataa
     3721 ggtgcaagcg gtggtgccga tcctgctgga ataataggga tatgggccat atacaagttc
     3781 tcctgtgtgg ggcaaaccaa gacgaaccat aggtgccgat ctaggtctac accaagttgg
     3841 cgttagat
//
LOCUS       DATBNL010000289         1890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_23220, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000289 DATBNL010000000
VERSION     DATBNL010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23220"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VIC30_04890"
     CDS             <1..181
                     /locus_tag="VIC30_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009855756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HEY7803754.1"
                     /translation="PVDGKANEALLRWLANMLRLKKQDVMLISGQTSRDKRVRLQRIK
                     ATEVLVALGLADSSL"
     gene            complement(186..968)
                     /gene="fabI"
                     /locus_tag="VIC30_04895"
     CDS             complement(186..968)
                     /gene="fabI"
                     /locus_tag="VIC30_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEY7803755.1"
                     /translation="MGFLAGKRLLITGVISDRSIAWGIARACHEQGAELAFTYAGDRF
                     KDRVEGYAKDFGSQIVLPCDVAEDDQINAVFADLKSEWDGLDGIVHSIGFAPRESIAG
                     EFLDGLSREAFRIAHDISAYSFPALVKAGLPMMQGREASVLTLTYLGAERAVPHYNTM
                     GLAKASLEASVRYLASNLGPSGIRANGISAGPIKTLAASGIKDFGEILRYVETNAPLR
                     RNVTTEQVGNAAAFLLSDLASGITGEIMHVDSGFSTAVPAYG"
     gene            complement(1019..>1890)
                     /locus_tag="VIC30_04900"
     CDS             complement(1019..>1890)
                     /locus_tag="VIC30_04900"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY7803756.1"
                     /translation="FELEQTWWRDQRRDPIASTNAALDYLEYLYEYQGDWYLAFASYN
                     WGEGSVRRALAKNERAGKPLDYRYIRMPRETQNYVPKLQAIKNIIADPERYGVILPII
                     NNEPYFVTVKKDRDIDLKVAAELAEMPVDEFAALNPAFNQGVILADLNPEIILPREQL
                     PVYLANLAAYEGDLTSWKKYPAKKGERVDEIARTFNVSVTAVRRANDLNRNTRTLSED
                     MVLIIPGPTGDVTVATAQFAQQLSTQTYRVRSGDTLSGIARKFGTRVSTLRELNGIKG
                     SKLRIGQRLQVPS"
BASE COUNT          440 a          497 c          519 g          434 t
ORIGIN      
        1 gccagtcgat ggcaaagcca atgaggcact gctgcgttgg cttgccaata tgctaagact
       61 caaaaagcag gatgtgatgc tcatcagcgg tcaaaccagt cgagacaagc gagtcagact
      121 gcaaagaata aaggccaccg aagttctggt ggccttgggg ttggcagaca gttcgcttta
      181 acttcttaac cgtaagctgg cacagctgta gagaacccgg agtcaacgtg catgatctca
      241 ccggtgatac cagaagccag gtctgataac aaaaatgcgg cggcattacc cacttgttcg
      301 gtggtgacgt tgcgacgcaa cggcgcattg gtttcgacgt agcgcaggat ctcgccgaaa
      361 tccttgatgc cactggccgc caaggtctta atggggccag ccgaaatgcc attggcacga
      421 atgccgcttg gccccaggtt gctcgccaga taacgcacgc tggcttcaag cgacgccttg
      481 gccagaccca tggtgttgta gtggggtacg gcacgctctg cacctagata ggtcagcgtg
      541 agcaccgagg cctcgcggcc ctgcatcatg ggcaggcctg ctttgacgag tgccggaaag
      601 ctgtaggccg aaatgtcgtg cgcaatacgg aaggcttcgc gtgacaggcc atcgagaaac
      661 tcaccagcga tcgattcgcg cggcgcaaaa ccaatagagt gcacaatgcc gtccagacca
      721 tcccattcgg atttaaggtc agcaaagaca gcattgattt gatcgtcctc ggccacatca
      781 cagggcaaca caatctggct gccgaaatct ttggcataac cctcaacgcg atccttgaac
      841 cggtcacccg cgtaggtaaa tgccagttca gcgccttgct cgtgacaggc acgcgcgatg
      901 ccccaagcga ttgatcggtc agagatcaca cccgtgatca ggagtcgttt gccagccaaa
      961 aaacccatgg ttgtcttcct gtattgttaa ataaatattc gaattcatcg cccatgtttt
     1021 aactgggcac ttgcaatcgt tgtccgattc gcagtttaga ccctttaatg ccgtttagct
     1081 cgcgcaaggt gctcacacgt gtaccaaact tgcgcgcgat accagacagg gtgtcgccac
     1141 tgcgtactcg ataggtttgc gttgatagtt gttgggcaaa ctgagcagtt gctaccgtga
     1201 cgtcaccggt gggccctgga atgatgagaa ccatatcttc agacaaggtg cgcgtgtttc
     1261 ggttgaggtc attggctcgg cgcacagctg tcactgagac attgaacgtg cgtgcaatct
     1321 cgtcgacgcg ctcgcctttt ttagcggggt actttttcca ggaagtcagg tcaccctcat
     1381 aggctgcaag gttggccaga taaaccggca gctgctcgcg cggcaaaata atctcggggt
     1441 taaggtctgc caagatgacc ccttgattaa atgcggggtt aagcgctgcg aactcatcga
     1501 ctggcatttc agcgagttca gcggccactt tcaggtcaat atcgcggtct tttttgactg
     1561 ttacgaaata cggttcgtta ttgatgatgg gcaagatcac cccatatcgc tcgggatcgg
     1621 caatgatgtt cttgatggct tgtaatttcg gcacatagtt ctgggtttcg cgaggcatcc
     1681 ggatgtagcg gtaatccagc ggtttaccag cgcgttcatt tttagccagt gctcgacgca
     1741 ccgatccctc accccagttg taggaggcaa acgccaggta ccagtcgcct tggtactcat
     1801 aaagatactc aaggtagtcc aaagcggcat tggttgaggc aatggggtca cggcgttgat
     1861 cgcgccacca ggtttgctcg agctcaaata
//
LOCUS       DATBNL010000290         1764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143011, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000290 DATBNL010000000
VERSION     DATBNL010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143011"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VIC30_04905"
     CDS             <1..447
                     /locus_tag="VIC30_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013517705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY7803757.1"
                     /translation="LIADEPTTALDVSVQAQIISLLKRLCRERGTAVMLITHDMGVIA
                     EATDRVAVMYAGRLAELGPTREVLTEPQHPYTHGLMASTPGASLGKSRLHQIPGSMPR
                     LDAVPDGCAFHPRCPYATDKCRELPQPHINAGRAACWHPLLDEKVL"
     gene            447..1415
                     /locus_tag="VIC30_04910"
     CDS             447..1415
                     /locus_tag="VIC30_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018573609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY7803758.1"
                     /translation="MALLQVKNLSRVFDVSKPWLNRVLERRAKALLKAVSDVSFDVQA
                     RSTYALVGESGSGKSTIGKMLVGLLRPSAGTVEIDGVDLANETDAAKIDAVRSNIQMI
                     FQDPYASLNPRWKVEDIIVEPVAARGGNTTGLAQKLLEQVGLSGRDARKFPHEFSGGQ
                     RQRICIARALASEPNLIVCDEPTSALDVSVQAQVLNLMSDLKDDFGLTYVLISHDLTV
                     VRHMADRIGVLYLGRLVEEATSDALFETPKHPYTQMLLAAAPLIDGFGRETQPPEGEI
                     PDPINPPSGCAFHPRCPIAQGICREQRPEMRELGGIRVACHLADMT"
     gene            complement(1470..>1764)
                     /locus_tag="VIC30_04915"
     CDS             complement(1470..>1764)
                     /locus_tag="VIC30_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HEY7803759.1"
                     /translation="FFYNAALLMEGTWFEILRAGATAVVGVFLLSSAVQGWFMGGMAV
                     WFLRIALTVAALSMIEGGWTTDLIGIGIAVAVVLVQRVIKPKPGAMPKVTGMD"
BASE COUNT          411 a          511 c          459 g          383 t
ORIGIN      
        1 ttgattgccg atgagccaac cacggcgctt gacgtgtcgg tacaagcgca gatcatttcg
       61 cttttaaagc gtctatgtcg agagcgtgga accgctgtga tgttgatcac ccatgatatg
      121 ggtgttatcg ctgaagccac cgaccgtgtt gccgtcatgt atgcagggcg attggccgag
      181 cttggtccaa cgcgtgaggt actcactgag ccgcagcatc cgtataccca tggcttaatg
      241 gcgtcaacgc caggcgcgtc gcttggcaaa agccgcttgc accagattcc gggatccatg
      301 cctcgactag acgcagttcc agatggttgc gcgtttcacc ctcgctgtcc ctatgcaaca
      361 gacaaatgcc gcgaattgcc tcaaccgcac atcaatgcag gtcgtgcagc atgctggcat
      421 cccctgcttg acgaaaaggt cctctaatgg cgctgctaca ggtcaaaaat cttagccgtg
      481 tatttgatgt atccaaacct tggttaaacc gggtgcttga gaggcgtgcc aaggcgttgc
      541 ttaaagccgt atcagatgtc agtttcgatg tacaggcgcg cagcacgtac gcgcttgttg
      601 gcgagagcgg atcggggaag tccacgattg gtaagatgct agttggattg cttaggccta
      661 gcgctggtac cgtagaaatc gacggtgtcg atttagcgaa cgaaactgat gcggccaaga
      721 tcgatgccgt tcgatccaac atccagatga tcttccagga tccgtacgca tctcttaacc
      781 cacgctggaa agtcgaggac atcatcgtcg agcctgttgc cgctcgaggt ggcaatacca
      841 ctggtttagc acaaaagcta ctcgaacaag tcggactgtc ggggcgcgat gccaggaaat
      901 ttcctcatga gttctccggt ggccagcgac aacgcatctg cattgcacgc gcacttgcct
      961 cagagccgaa tctaatcgtc tgcgacgaac cgacctcagc gctcgatgtc tctgttcaag
     1021 cacaggtcct taacttgatg agcgacctaa aagacgattt tggcttgacc tatgtgctca
     1081 ttagccatga cttaaccgtg gtgcgacaca tggcagaccg catcggtgtt ctatacctgg
     1141 gtcgtttagt tgaagaggcg acatccgatg cactgtttga aacgcctaaa cacccataca
     1201 cacaaatgct tttggccgct gcgccactga tcgatggctt tggtcgcgag acgcaaccac
     1261 ccgaaggtga gatccccgac ccaatcaatc caccctctgg ttgcgcgttt cacccgcgct
     1321 gcccaattgc tcaagggatt tgtcgcgagc aacgccctga aatgcgcgaa cttggcggca
     1381 tccgagttgc ttgccatctg gcagatatga cctagcacac tggtgtgcaa atcaggggcg
     1441 ctggccatta agccagcgcc cctgttcgtt taatccatcc cggtcacctt gggcatggcg
     1501 cctggcttgg gcttgatcac acgctgcacc agcaccactg ccaccgcaat accaatgccg
     1561 atcagatccg tggtccagcc gccttcaatc atcgacagtg ctgccaccgt caatgcgatt
     1621 cgcaagaacc agacggccat gccacccatg aaccagccct gcacagcaga agacaagagg
     1681 aacacaccaa ccacggcggt ggcacccgca cgcaaaattt caaaccaggt gccttccatc
     1741 aaaagcgccg cgttgtaaaa gaac
//
LOCUS       DATBNL010000291         1926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192411, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000291 DATBNL010000000
VERSION     DATBNL010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192411"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..960)
                     /locus_tag="VIC30_04920"
     CDS             complement(67..960)
                     /locus_tag="VIC30_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEY7803760.1"
                     /translation="MSTAWLVLPDFLIILLGWVLHHRFGFGRDFFTGLEKLVYYVLFP
                     TLLFQSILKTPLSPQTTGDLLLVAFILVTVGFAMVRLGGRLFRVPDIALASATQCGFR
                     FNTYLGLALAPTLGGASGQTVMALVVGLTVPLANIAAVYPLARHQGGNLFGALLRNPL
                     LMATLLGLAGNLAGFELPQSVDIMAERLGMAAVAMGILCIGPSLSWQGSQGIGGFITW
                     VVATKILLLPVVAWTCAYWLGLDNTTTAMLVLFGSLPCATAAYVLAVRMGGDGRLVSL
                     IISVTTLASAITIPVWMSLLT"
     gene            1035..>1926
                     /gene="xerD"
                     /locus_tag="VIC30_04925"
     CDS             1035..>1926
                     /gene="xerD"
                     /locus_tag="VIC30_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEY7803761.1"
                     /translation="MSTVTTPGATQTATVGSGTTIDTFIDALWLEDGLSANTLAAYRR
                     DLVAFNQWLGESGKTLDQAQGPDVLAWQAQEYQHTKPSTANRRLATLRRYYRWARRVG
                     RVQVDPCLQVVAAKQVLRLPKTLSEAQVEALLNAPDHTERGVRDRAMLEVLYATGLRV
                     SELVNLGVLDVSLSDGVIRVVQGKGGKDRLVPLGQEAAHWIERYLAQARPALLRQRTS
                     SALFVTARAAPMTRQSFWLLIKKYAIKAGVTAPLSPHVLRHAFATHLLNHGADLRVVQ
                     LLLGHADISTTQIYTHVARER"
BASE COUNT          480 a          519 c          560 g          367 t
ORIGIN      
        1 ggtaggttta gcgtcaaatt atctgtggac atcttgcaac acttttggca ggcatgaagg
       61 tgattgctag gttagcagac tcatccagac gggaatggtg atggcactag cgagcgttgt
      121 cacggaaata atgaggctga ccaggcgccc gtcacccccc atccgaacgg cgagcacata
      181 ggctgccgtg gcgcaaggca atgagccaaa cagtacgagc atggcggtgg tggtgttgtc
      241 tagaccgagc caataggcgc acgtccaggc caccactggt aacaacaaaa tcttagtggc
      301 caccacccag gtgataaaac caccaatgcc ttgactgcct tgccatgaca ggctcggacc
      361 gatgcaaaga atccccatgg cgacagcggc catgcccagt cgctcggcca tgatgtcgac
      421 cgactgaggt agttcgaacc cggctagatt gcctgcgaga cccagcaacg tggccataag
      481 caaggggttg cgtaacagcg cgccaaacag attgccgcct tgatggcgtg ccaaaggata
      541 gacagccgca atattggcca acggcaccgt gagcccaacc accagtgcca tgacagtttg
      601 accgctagca ccgccaagcg tgggcgccag tgccagaccg agataggtgt taaaccgaaa
      661 accacactgg gttgctgaag ccaaggcgat atctggcaca cgaaacaaac ggccaccgag
      721 cctgaccatg gcaaacccaa cggtgaccag gatgaaagcc acgagcagca agtcgccagt
      781 cgtttgtggc gacagtggtg tctttaagat ggactgaaac aacagggtgg gaaacaaaac
      841 gtaatacacc agcttttcta ggccggtaaa aaaatcacgg ccgaaaccga agcggtggtg
      901 cagaacccag cccagcagaa tgatcaagaa gtcaggtaat acaagccagg cagtggacat
      961 atcagtgaat tcgtcgctta aatcaatcaa taccgctatt gttgcgcatt tgcgcacaag
     1021 ccataatcac gttgatgagc acagtgacaa ctccaggggc aactcagacg gcaaccgttg
     1081 gcagtggcac aaccatcgat acctttatcg atgcgctgtg gctcgaagac gggttgtcgg
     1141 ctaacacgtt ggcggcctac cgtcgcgatc tcgtagcatt taatcaatgg ttgggtgaga
     1201 gcggcaagac gctggatcag gcacaagggc ccgatgtgct ggcctggcaa gcacaagagt
     1261 accaacacac caagccaagc acagccaacc ggcgcttggc cacgttacgt cgctattacc
     1321 gctgggccag gcgtgtcggt cgagtgcaag ttgacccttg tttgcaagtg gtggctgcta
     1381 agcaagtact gcgtttgcct aaaacgctca gtgaggctca ggtcgaggcg ttgttaaatg
     1441 cgcccgatca tactgagcgt ggcgtgcgtg accgggccat gctcgaagtg ctctacgcca
     1501 ctggattacg cgtatctgag ttggtcaacc tcggggtgct cgatgtcagc ctgtctgatg
     1561 gtgtgatccg agtcgtgcaa ggcaaaggtg gcaaagaccg gctggtgcca ttggggcaag
     1621 aggcggcgca ttggattgag cgataccttg cacaggctag gccagcgttg ttaaggcagc
     1681 gaaccagttc ggcgctgttt gtcacggcac gggccgcgcc catgacccgg cagtcgtttt
     1741 ggttattgat aaaaaaatac gccatcaaag cgggtgtcac tgcgccgtta tcgccccatg
     1801 tgctgcgaca cgcttttgcg acccacctgc tgaaccacgg tgcggacttg agggttgtgc
     1861 agctactgtt gggacatgcc gacatttcca cgacgcagat ctacacgcac gtggctcgag
     1921 agcgct
//
LOCUS       DATBNL010000292         1716 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_152977, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000292 DATBNL010000000
VERSION     DATBNL010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152977"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1716
                     /gene="murE"
                     /locus_tag="VIC30_04930"
     CDS             <1..>1716
                     /gene="murE"
                     /locus_tag="VIC30_04930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramyl-tripeptide synthetase"
                     /protein_id="HEY7803762.1"
                     /translation="TAVDGKRHEGLLTTPDVVSIHRYLAKLRDQGATHVVMEASSIGL
                     DQHRLDAVDIDLGVFTNLTQDHLDYHGDMQAYAQAKALRCKRPELKHAVINLDDRYAE
                     QMIQNSVAPVLTYAVNNASATLLASAVRQGQATQQFTLQHEDQSIEVKTPFVGTHAIA
                     NMLAVAGVLRVLGWSLTKVAATLQQLPAVAGRLEPVEPLVSNAYVPAVMVDYAHTPDA
                     LRNVLDALAPMAKARGGRLWCVVGCGGDRDRQKRALMAQVAQSCADRAVLTSDNPRSE
                     DPGLILQEMLSGLTDLSDVSVSIDRAQAILSTIWQAKPEDVVLIAGKGHERYQEVDGN
                     KHVFDDRHWGQLALLMAHNPPAVQTDTRQLQSGALFVALRGERFDGHDYLATAQKVGA
                     VAAIVEQPDEAVNLPQIVLGPTLRALQTLAAAWRAYHDIPVIGITGSNGKTTTKEMTA
                     AICRQWVGADQTLSTVGNLNNEIGVPLTLMNLRPHHQVAVIEMGMNHPGEIERLAAMA
                     QPTVALVLNAQREHQEFMKSVEAVAKENGQALCALSAHGVAVYPANDTYSDLWASLSK
                     RAGKR"
BASE COUNT          384 a          450 c          512 g          370 t
ORIGIN      
        1 gactgcagtg gatggcaagc gccatgaggg actgttaacc acaccggatg tggtgagtat
       61 tcatcgctat ttggccaagt tgcgtgacca aggcgccacg cacgtggtga tggaagcgtc
      121 gtcaattggt cttgatcaac acagactcga cgccgtggat attgacctgg gtgttttcac
      181 gaacttgacc caagaccatc tggattacca tggggatatg caggcatacg ctcaggccaa
      241 agcgctgcgc tgtaagcggc ccgaactcaa gcacgcggtg attaatcttg atgatcgtta
      301 cgccgaacaa atgatccaga actcggtggc tccggtgttg acctacgccg tcaacaatgc
      361 ctcggccaca ttgcttgcta gtgctgtcag acaaggtcaa gccacacagc agttcacgtt
      421 gcagcacgag gatcaaagta tcgaggtaaa gacgcccttt gttggtaccc atgcgattgc
      481 caacatgttg gcagtagcgg gtgttttacg tgtgctcgga tggtcgctga ccaaggtcgc
      541 agcaactttg cagcaattgc ccgctgtcgc cggtcggcta gagccggtcg agcccctggt
      601 gtcaaacgcg tacgtaccag ccgtgatggt ggattatgcg cacacgcccg atgccttgcg
      661 caatgtgttg gacgcactcg cgcccatggc caaagcacgc ggcgggcgct tatggtgtgt
      721 ggttggttgt ggtggggacc gtgaccgaca aaagcgagcc ttgatggcgc aggttgcaca
      781 gtcttgtgcc gatcgcgcgg tgctcacgag tgacaacccg cgcagcgaag acccgggtct
      841 gattttgcag gagatgctgt cgggtttgac cgatctgtca gacgtcagcg tgagcattga
      901 tcgtgcccag gcaatcctga gcaccatctg gcaagctaag cctgaagatg tggtactcat
      961 cgctggcaag ggtcatgagc gctatcagga agtagatggc aacaagcacg tgtttgatga
     1021 tcgtcactgg ggtcagttgg cattgctgat ggcacataat cccccagccg tgcagaccga
     1081 tacgcgccag ttacagtctg gcgcgttatt tgttgccctg cgtggcgaac gatttgatgg
     1141 tcatgattat cttgccaccg cacaaaaagt tggcgccgtt gccgcgatcg tggagcagcc
     1201 agatgaggcg gtaaatttgc cgcagatcgt cttaggcccc acccttagag cattgcaaac
     1261 attggccgct gcgtggcgcg cttaccacga tattccggtg attggcatta ccggcagtaa
     1321 cggtaaaacc acgaccaagg aaatgaccgc tgcgatctgc cgtcaatggg tgggcgctga
     1381 tcagacgttg tccaccgtgg gtaatctgaa taacgagatc ggcgtgccat taacgctcat
     1441 gaacttaagg ccacaccacc aagtggctgt cattgaaatg ggcatgaacc accccggtga
     1501 aattgagcgt ctggcagcca tggcgcaacc cacggtggcg ctcgtgctta acgcacaacg
     1561 tgagcatcag gagttcatga aatctgtcga ggccgtggcc aaagagaatg gccaagcgct
     1621 gtgtgcattg tcggcgcacg gcgttgcggt ctatccggca aacgatacct acagtgattt
     1681 gtgggccagt ctctccaagc gagcgggcaa acgata
//
LOCUS       DATBNL010000293         1592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_63313, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000293 DATBNL010000000
VERSION     DATBNL010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63313"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VIC30_04935"
     CDS             <1..689
                     /locus_tag="VIC30_04935"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEY7803763.1"
                     /translation="WYHQATHRGGWRVVVLYPAEALSVVSANALLKALEEPPANTLFL
                     LASDAPDRLLPTLVSRCQKFALKLPDIDQCVQWLKQNGVDKPQAWLAAAGGAPLAALQ
                     LAQSGQAACPGWASELITDLAQGKAVDLPGLADNLAKGHASGWLGTLQRLTVDLGFVA
                     SGLPARYFPGLEFSYTDVVRASEDRKNQLTRLTNLSGTMNQQARLANHPLSAKLFAQQ
                     CLQTFCDALK"
     gene            686..1480
                     /locus_tag="VIC30_04940"
     CDS             686..1480
                     /locus_tag="VIC30_04940"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014111526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEY7803764.1"
                     /translation="MTVFIDSHCHVNFPELAEDFSAIAQRMTENRVKMALCVSVNLPD
                     WDGLIAMVEREPTLWGSVGVHPDYENEIEPTVDDLVSRSHHPKVVAIGETGLDYYRLT
                     GDLEWQRERFRTHIRAAKQAKLPLIIHTRQAQEDTIRILQEEGANEVGGVMHCFTESW
                     EMAQQSMELGFYVSFSGIVTFKNARDLQETASKMPMDRLLIETDSPYLAPVPYRGKRN
                     DPSLVVHVADKIAELQGLSAQEVADQSTENFFRLFNKVERQTEVLT"
BASE COUNT          384 a          392 c          431 g          385 t
ORIGIN      
        1 cttggtatca ccaagccacg catcgcggtg gctggcgtgt ggtggttctg tatcccgctg
       61 aggcactatc agtggttagc gccaatgcat tgcttaaagc cttagaagag ccacctgcca
      121 atacattgtt tttgctggcc agtgatgcgc cagatcggtt gctaccgaca ttggtgtcgc
      181 gctgccagaa attcgcactc aaactgccgg atatagacca atgtgtacag tggctgaaac
      241 aaaacggtgt ggataagccc caagcctggc ttgcggcggc cggcggggcg cctctggcag
      301 ccttgcaatt ggcccaatcg ggccaggcag catgcccggg ttgggcgagt gaacttatca
      361 ctgatttagc acagggcaaa gcggttgatc tgcccggatt ggccgataat ttagccaaag
      421 gtcatgccag tggatggtta ggtacattgc agcgcttgac ggtcgatttg gggtttgtgg
      481 cttcggggtt gcccgcgcgg tattttccgg ggcttgagtt ttcttacact gatgtggtca
      541 gagccagtga agatcgtaaa aatcagctca cacgcctgac caacttatca ggcacaatga
      601 atcagcaagc gcgccttgcg aaccacccgc taagtgccaa actttttgcg caacaatgcc
      661 tacaaacttt ttgtgatgct ttgaaatgac tgtttttatt gattcccact gtcacgtgaa
      721 ctttcctgaa ctagccgagg atttcagtgc gattgcccaa cgcatgactg agaaccgtgt
      781 caagatggcc ctttgtgtca gtgtgaactt gccagactgg gatggactga ttgccatggt
      841 cgagcgcgag cccacgctgt ggggttccgt gggtgtgcac cccgactacg aaaacgagat
      901 tgaacccacg gtcgacgatc ttgtgtcgcg tagccatcac cctaaagttg tcgccattgg
      961 tgagacaggg cttgactact atcgcctgac gggcgatctt gagtggcagc gtgagcgttt
     1021 ccgtactcac atccgggccg ccaaacaagc caagttgccg ttaattatcc atacacgcca
     1081 ggcacaggaa gacaccattc gaatcttgca agaagagggc gccaacgagg ttggtggtgt
     1141 gatgcattgt ttcaccgaga gctgggagat ggcccagcaa agcatggagc ttggctttta
     1201 cgtgtcgttt tctgggattg tgacctttaa gaacgcccgt gacttgcaag aaaccgccag
     1261 caaaatgccc atggatcgct tgttaatcga aaccgattcg ccatatctcg cacccgtgcc
     1321 gtatcgcggt aaacgcaatg atccatcgct cgtggtgcac gtggctgaca aaattgccga
     1381 gctccagggt ttgtcagcgc aagaggttgc agaccaatca acagagaatt tctttagact
     1441 tttcaataag gtagagcgtc aaactgaagt tctaacttaa gttgcgttgg tatgcttttg
     1501 tattgagtca cacgaacgat ttaaaacgaa ctggctaaca cgatagatag gaaaaatctt
     1561 gctagaaatc acgcaaataa aaagcgccaa ct
//
LOCUS       DATBNL010000294         2403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_123182, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000294 DATBNL010000000
VERSION     DATBNL010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123182"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VIC30_04945"
     CDS             complement(<1..631)
                     /locus_tag="VIC30_04945"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY7803765.1"
                     /translation="MSTNPGAGLRSKGSAFALMLGALGVVFGDIGTSPLYAFEVVFAN
                     PLHPVSPTPENILGVLSLFVWSLVLIVTLKYVLFIMRFDNGGEGGIVALLTLLLSRCA
                     KNSRLRWWFMPLGLLGAALFYGDGVITPAISVVSAVEGLETISPEFKKYVVPVSLVVL
                     VLLFLCQSRGTESIARLFGPVMLIWFFVLAALGVHAMSSHPAVLEALNPW"
     gene            complement(973..1167)
                     /locus_tag="VIC30_04950"
     CDS             complement(973..1167)
                     /locus_tag="VIC30_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012345241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEY7803766.1"
                     /translation="MKINVGGIDRILRIVVGVVLIALALAGTIGPWGWIGVLPLATGL
                     FKICPAYSLLGVNTCGLKKQ"
     gene            complement(1224..1553)
                     /locus_tag="VIC30_04955"
     CDS             complement(1224..1553)
                     /locus_tag="VIC30_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY7803767.1"
                     /translation="MNAVTLTPSSLKELRTSAGKACALLKTMANEDRLMLLCHLIDAE
                     LNVGELEERTGIRQPTLSQQLGVLRDEKLVSTRREGKYIFYKLASPSVLLMMQTLYGL
                     YCNPDKS"
     gene            1651..>2403
                     /locus_tag="VIC30_04960"
     CDS             1651..>2403
                     /locus_tag="VIC30_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020748302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY7803768.1"
                     /translation="MRVQPFFDKDTSTFTYVVDNGPGSACAIIDSVLNYDPKSGRTNT
                     AGADAVIEHVKTNNLKTEWLLETHAHADHLSAAPYLKRELGGKIAIGEAIQTVQGVFK
                     KIFNLEPEFELDGSQFDYLFKPDETFKIGDIEAQAWHVPGHTPADMAYIVNGDTVFVG
                     DTLFMPDVGSARCDFPGGDANTLYNSVKRLLSLPPETKLMMCHDYPPAGREVRCETTV
                     AEEREKNIHLHDGVSEAEFVNMRSTRDATLSMP"
BASE COUNT          632 a          667 c          590 g          514 t
ORIGIN      
        1 gccagggatt cagggcctcc aacactgccg gatgcgaaga catggcatga acgccaagcg
       61 cggccagtac aaaaaaccag atgagcatga ccgggccaaa cagccgcgcg atgctttcgg
      121 tgccacggct ctggcaaaga aatagcaaca ccagtaccac caaggagacc ggcacgacat
      181 acttcttgaa ctccggtgag atcgtctcca agccttcaac ggctgagacc acggagatgg
      241 ctggtgtgat aacgccgtcg ccatagaaca gtgccgcccc gagcaaacca agcggcatga
      301 accaccagcg cagtcggcta ttctttgcgc aacgactcag taacaacgtc aacagcgcga
      361 caatcccgcc ctcaccgcca ttgtcaaacc gcatgatgaa caagacgtac ttcagagtca
      421 caatcagcac cagcgaccag acgaacagtg acagcacacc gagaatattc tctggcgtgg
      481 gggacacagg atgtagagga ttggcaaaga caacttcgaa ggcgtacaga ggactggtgc
      541 caatgtcacc gaataccacg ccaagcgcgc ctaacatcaa cgcaaaagca gaacccttgc
      601 ttcggagacc tgcgcccgga tttgtcgaca ttgttaaacc ctatcttcta ctgttcgttg
      661 ggtttatagc agaccttgag taacagagcg ttgcccagta gccagtaatt cagtagtcat
      721 tagacaatga gaggtgcaag ctaggtacac ggcataggcc gaggcgatgc ggcggttggc
      781 tacgcaccag aggtgacaac aaacttgtgc tggcaccact ttgccctact cggtacggca
      841 aagtggtcag tcaaaaactt gcaacggttg cgctcacttg acgcccaaac acctaatgac
      901 gggtgtttat tcaccattgc attcaccgtt tgtactgctt gtactgcttg cagttcttat
      961 cgatgcttcc tactactgct tcttcaaacc gcaggtgttc accccaagca gagaataggc
     1021 cgggcagatc ttaaacagac ccgtggccaa tggcaacacg ccaatccagc cccaagggcc
     1081 gatggtgcct gctaatgcca gcgcgataag cacaacgccc accacaatcc tgagaatccg
     1141 atcgatacca ccaacattga ttttcatatc gctctcctta caaaaggcgc aagactcgcg
     1201 ggctgcgagg cacgcctaac tactcacgac ttgtcagggt tgcaatacaa accataaagg
     1261 gtctgcatca tgagcagcac cgacggactt gctaacttgt aaaagatgta cttgccctct
     1321 cggcgggtgg atacaagttt ttcatctcga agcacaccga gctgttgcga caaggtcggc
     1381 tgacggatac cggtacgctc ttcgagttca ccgacgttca attccgcgtc aatcaaatga
     1441 cacaacagca tcaatctatc ttcgttggcc atggttttca gtaaagcgca ggctttaccg
     1501 gccgatgtcc gtagctcttt taaacttgat ggcgtcagtg tgacggcatt catggctatt
     1561 ctctataggt ctaatgagaa tattatattt gtaaataaac tattaatcaa tataattagc
     1621 ttatagccgt tttttataag gagtaacgag atgcgcgtac aacctttttt tgataaggac
     1681 acctcaacat ttacctatgt ggtcgacaac ggccctggta gcgcctgcgc catcatcgat
     1741 tccgtgttga actatgaccc caagtcaggt cgcaccaaca cagccggtgc cgatgcggtc
     1801 atcgaacacg tcaagaccaa caacctaaaa accgagtggt tgcttgagac ccacgcccac
     1861 gccgatcacc tgtcagctgc accctatttg aagcgtgagc ttggcggcaa gatcgccatt
     1921 ggcgaggcta tccaaacggt tcaaggcgtc tttaaaaaga ttttcaatct ggagcccgag
     1981 tttgaactcg acggatcaca gttcgactac ctctttaaac ccgatgagac tttcaagatc
     2041 ggcgatatcg aagcccaagc ctggcatgta cctggccaca cgcctgctga catggcgtac
     2101 atcgtcaatg gcgacacggt gtttgtaggc gatacgttgt tcatgcccga tgttgggtca
     2161 gcacgatgcg acttcccagg cggcgacgcc aacacgcttt acaactcggt caagcgcttg
     2221 ttgtcactgc cacctgagac caaactcatg atgtgccatg actatccgcc agccgggcgt
     2281 gaggtgcgtt gcgagacaac ggtggctgaa gagcgtgaga agaacatcca cctgcacgat
     2341 ggtgtcagcg aggcagagtt cgtgaacatg cgtagtaccc gtgatgccac gttgtcgatg
     2401 ccc
//
LOCUS       DATBNL010000295         3068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_133135, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000295 DATBNL010000000
VERSION     DATBNL010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133135"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /gene="rpsI"
                     /locus_tag="VIC30_04965"
     CDS             <1..325
                     /gene="rpsI"
                     /locus_tag="VIC30_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019447061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY7803769.1"
                     /translation="GSGKIMVNGKPVDEYFARETGRMVVRQPLELTGHLESFDFHINV
                     HGGGENGQAGAIRHGITRALIDYDATLKPSLSNAGYVTRDAREVERKKVGLRKARRRK
                     QFSKR"
     gene            509..1552
                     /gene="argC"
                     /locus_tag="VIC30_04970"
                     /pseudo
     CDS             509..1552
                     /gene="argC"
                     /locus_tag="VIC30_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011903719.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
     gene            complement(1531..2937)
                     /locus_tag="VIC30_04975"
     CDS             complement(1531..2937)
                     /locus_tag="VIC30_04975"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY7803770.1"
                     /translation="MPRSIGLGQLTLIGVGSTLGTGIFFVMAETVPIAGPGVVVAFLV
                     AALTAGLTAMCYAEVSSRLPVSGASYTFTYVTMGEGVAVMVAACLLLEWGIAGAAVSV
                     GWSAYLNQLVEMVTGHAIPIAWRQPPFQSSVSGLVPGGPGIVNLPAIVVVWLCTLLLL
                     RGSQASARLNTFLTVTKVTILLLFVVMTLPVFRAEHFAPFMPFGVSGVSTAAAIIFFS
                     FVGLDAVVNAGEDAINPERNIPRAILGALMIVTTVYVLVAASSLGAQAYDAFTGSNGS
                     LPAILLKATQSPASSILLATGAVISIFSVTFLTLFGQARIYLAMARDGLLPGRLANLD
                     RQTQSPAAATVLSGLIITPLAGFLPSHVLWAMVSLGTLMVFIAVAVALILLRRQGEVC
                     THIPNSDSYQSTGFKVPGYPFTPLVSIAACLYLIANLSATVFTLFAVWLTLALLFYAA
                     FGQRRAQLLARHQGKMAT"
BASE COUNT          714 a          790 c          904 g          660 t
ORIGIN      
        1 aggtagtggc aagatcatgg tcaacggcaa gcctgttgac gagtactttg cccgcgaaac
       61 cggtcgtatg gttgttcgtc agccgctcga actgacaggt cacctcgaat cgtttgattt
      121 tcatatcaac gtgcacggtg gcggtgagaa cggtcaagct ggcgcgattc gccacggcat
      181 tacccgcgca ttgatcgact acgatgcaac gttaaagcca tcactgtcga acgcgggtta
      241 tgtgactcgc gacgctcgtg aagttgagcg taagaaagtg ggtctgcgta aagcacgtcg
      301 ccgcaagcag ttcagcaagc gctaattttt ttagcgtctc gcgacaaaca atcgccccgt
      361 gcttgcgccc ggggcgattg tctattgagg ctcgggtatc gctgtgtgtc agtactccga
      421 ctagaatgtc ggcgtatgca atctcaaagc agccccaaag caatcaccgt cacaaataag
      481 gattcatgac atgtcggcct cttcggattt gatcaaagtt gggattgtgg gtggcacggg
      541 ttatacgggc gttgagcttt tgcgcctgct gagccagcac ccccaggtaa aactgacagc
      601 cattacctca cgcaaggaat cgggcatgcc cgtggctgac atgtatccca atctgcgcgg
      661 tcatgtcgat ttggcgtttt gtacgccgga agaggcggcg ctgactgaat gtgacgtggt
      721 gttttttgcg acaccacacg gtgtggccat gagccaagca aaaactttgc tcgccgcggg
      781 cgtcaaagtc attgacctgg cagcggactt tcgcctgcaa gacaccgagg tgtttgagca
      841 gtggtacaaa atgccgcatg cttgccctga tgtgctagcc gatgcagtct acggactgcc
      901 tgagttgaac cgcgatgcca ttacccaagc cagtgtggtg ggcaatcccg gttgttaccc
      961 aaccacggtg ttgcttggtc tggcgccgtt gttgtcaccg acacccttga ttgataccag
     1021 cgacatcatt gctgacgcca aaagtggcgt tagcggcgct ggtcgtggcg cgtctgtggg
     1081 cacgttgttt tctgaggtta gcgacagttt ccgggcgtat ggggtagccg gtcatcggca
     1141 ccatccggag atcaaggctc aactcgaaac tttgtcgagt ggaccggtga acctcacgtt
     1201 tgtgccacat ttggtgccca tggtgcgcgg catgttgagc accatctatg tcaagttatt
     1261 gtctgatgcg cacggcaagg atctgcaagc gtgatatgaa acgttttatg ccggcgaggc
     1321 atttgttgat gtgatgcctc caggcagttt gcctgagact cgatcggtgc gtgcttcgaa
     1381 tcagttgcgt attgcactgc atcgcccgcc cggacaccct gaccgtttga tcgttctggc
     1441 cgcccaagac aatctggtca agggggcctc aggtcaagcc attcagaaca tgaatctgat
     1501 gtttggtttg cccgaagcca ccgggttaaa tcaggtcgcc atcttgccct gatgtctggc
     1561 aagtaactga gcccgtcgtt gcccaaaagc ggcataaaag agcagcgcga gcgtgagcca
     1621 cacggcaaat aaagtgaaca ccgtggcgct gaggttggca attagataca ggcaggcagc
     1681 gatgctcact agtggcgtaa atgggtaacc aggcaccttg aatccagtgc tttggtagct
     1741 atcagagttg gggatatggg tacaaacctc gccttgccgg cgcagtagta tcagtgccac
     1801 ggcgaccgcg ataaaaacca tcagcgtgcc caagctaacc atcgcccaca acacgtgact
     1861 gggcaaaaaa cctgctagcg gggtgattat caggcctgag agcacggtgg cggcagccgg
     1921 tgactgtgtt tgccgatcga gattagcgag cctgcctggc aacaagccat cgcgtgccat
     1981 ggcaaggtag atccgagcct gaccgaatag cgtcaagaag gtcacgctaa agatcgaaat
     2041 aaccgcgccg gtggcaagca agatgctgct cgcgggactt tgtgtggctt ttaaaagaat
     2101 cgcaggtagt gatccgttag aacctgtaaa ggcatcatag gcttgtgcgc ctagactact
     2161 ggctgcgacc agtacataga cggtggtaac gatcatcagc gcgccaagga tagcgcgcgg
     2221 gatattcctt tcagggttga tggcatcttc gccagcatta accacggcgt ccagaccgac
     2281 aaaactaaaa aagatgatgg ccgcggccgt gctcacgccg ctgacaccaa acggcatgaa
     2341 tggcgcaaag tgttcggcac gaaacaccgg tagggtcatc accacaaata acaacaaaat
     2401 cgtgactttg gtgacggtca gaaaggtgtt taaacgcgct gaggcctgcg agccgcgcag
     2461 cagcagcagg gtgcacaacc acacaacgac aatggctggc agattaacaa tgccagggcc
     2521 acctggcacc aagccactga cgctggattg aaacggaggt tggcgccacg caatgggtat
     2581 ggcgtggccg gtgaccattt ccacgagttg gtttagatag gcgctccacc ccacggagac
     2641 ggctgcaccg gcaatccccc attcaagcaa caagcaggcg gccaccatta ctgccacgcc
     2701 ttcgcccatg gtgacgtacg tgaaagtgta cgaggcgccc gacacgggca accggcttga
     2761 gacttcggcg tagcacatgg cagtcaagcc cgcggttaat gccgctacca ggaaggccac
     2821 cactacaccg ggtccggcaa tgggaacagt ctcggccatc acaaaaaaga tgccggtgcc
     2881 aagtgtgctg cccacgccaa ttaatgtcag ttgaccaagt ccgatggagc gcggcatttg
     2941 ggtaccagtg atttgggagg gtgaatcttg ttgggtgtgc gggtggggta gcggtttttt
     3001 atgaaagaag cggtaaaaca taagtgggtt ttgttatgga tggttggtga tggttggttg
     3061 agtaggta
//
LOCUS       DATBNL010000296         2415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_133141, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000296 DATBNL010000000
VERSION     DATBNL010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133141"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1486
                     /gene="ppk1"
                     /locus_tag="VIC30_04980"
     CDS             <1..1486
                     /gene="ppk1"
                     /locus_tag="VIC30_04980"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEY7803771.1"
                     /translation="AGLPHGFILLTSLIRAFAGELFPGMEAHGVFQWRVTRNSDLFVD
                     EEEVTNLRLALQGELSQRNFGSAVRLEIDQLTPPHIEALLQKEFGLQAADTYRVNGPA
                     NVARLMQICQEVDRPDLLFPEFRGPVPKAFTTLPHRMGAIFDLIAANDQLLHHPYQSF
                     QPVIDFLTAAASDPDVVAIKQTIYRTGEDSELMELLLAAARAGKEVTVVVELMARFDE
                     QTNIKWASRLEEVGAHVVYGVVGHKTHAKMLLVLRREQGRIRRYGHLGTGNYHQRTAR
                     LYTDFGLMTANPAICEDMDKVFAQLTGLGARRQLNCLMQSPFSLHGAVVELIKAETAA
                     AKAGKKARIMAKMNSLLEPQVIEALYAASAAGVKIDLVIRGVCALRSGVPGLSENIRV
                     RSIIGRFLEHSRVFYFYAGGHEKVYLSSADWMDRNFFRRVEVAFPVLDPALKRRVIRE
                     SFTLALRDNVRGWLQQPDGKFVQIASRSKPSSMHEELIRLLGNK"
     gene            1539..1615
                     /locus_tag="VIC30_04985"
     tRNA            1539..1615
                     /locus_tag="VIC30_04985"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1573..1575,aa:Pro,seq:tgg)
     gene            1781..>2415
                     /locus_tag="VIC30_04990"
     CDS             1781..>2415
                     /locus_tag="VIC30_04990"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY7803772.1"
                     /translation="MSILRIAELSGVSPATVSRVFNRPQQVSEATREHVMRIADHVGY
                     RPNAAARALRTQRSRIIGVMLPTLRNPVFAECLEGIAQKALDQGFGIMPIASGYDQHQ
                     EAAAIATLLAANVDGLVLTVTDPKHCAPALDALAQKNVPYVLAYNQSPDHLCVGVNSQ
                     AEVTRAVQRLVKAGHERIAMLSGELAASDRAHARYQGYLAGMALAQLPSMPL"
BASE COUNT          521 a          600 c          690 g          604 t
ORIGIN      
        1 ggctggcttg ccccatgggt ttattttgtt gacctccttg atccgtgcct ttgcagggga
       61 gctattcccc ggcatggagg cgcacggtgt gtttcagtgg cgggtcacgc gcaacagcga
      121 cttatttgtc gacgaagaag aggtcaccaa cttgcgtctg gccttgcaag gcgaattgtc
      181 acaacgtaac ttcgggtcag ctgttcggtt ggaaattgac cagctaacgc cgccgcacat
      241 tgaagcgttg ttgcaaaagg agtttggcct tcaggctgct gatacatacc gggtcaacgg
      301 ccctgccaat gttgctcgtt tgatgcagat ttgccaagaa gttgatcgcc ccgatttgct
      361 cttccctgag ttccgtgggc cggtgcccaa ggctttcacc acgctgccgc atcgaatggg
      421 cgccatattc gatctgattg ccgctaatga tcagttactt catcacccct atcagtcatt
      481 tcagccagtg attgactttc tgaccgcagc ggccagtgat ccggatgtgg tggcgattaa
      541 gcaaacaatt tatcgcacgg gagaagactc tgagctcatg gagttgttgc ttgcggcagc
      601 tcgggccggc aaagaggtca cggtggttgt tgagctaatg gcccggtttg atgagcaaac
      661 caacattaaa tgggcttcta ggctagaaga ggtcggcgca cacgtggtct acggcgtggt
      721 gggtcataag acccacgcca agatgttgct cgtgcttaga cgcgagcagg ggcgtatacg
      781 tcgctatgga cacctcggta cgggtaatta tcaccaacgc actgcgcgtc tgtacacgga
      841 ttttgggttg atgaccgcca accctgccat ctgtgaagac atggataagg tgtttgctca
      901 actcacgggc ttgggtgcca gacgccaact caactgtttg atgcagtcgc catttagctt
      961 gcatggggct gtcgtggagt tgatcaaagc cgagacggcg gctgccaaag cgggtaagaa
     1021 agcacgcatt atggccaaaa tgaactcgct acttgaacct caggtgattg aagcgctgta
     1081 tgccgcaagt gccgcgggcg tgaaaattga tttggtgatc cgcggtgtct gtgcgttgcg
     1141 ctcgggtgtg ccggggctat ctgagaatat ccgtgttcgc tcgatcattg gccggttttt
     1201 agagcattcg cgggtgtttt atttttatgc tggtggtcac gagaaggtgt atctctcgtc
     1261 ggccgattgg atggatcgga acttcttcag acgcgtggag gtggcgtttc cggtgctgga
     1321 cccggcactg aaacgtcggg tcatccggga atcctttacc ttggccctga gagacaatgt
     1381 gcgtggctgg ttacagcaac ctgatggaaa gtttgttcaa attgcatccc gatcaaagcc
     1441 atctagcatg catgaagagc tgattcggct actaggtaac aaataggctt atagcgagcg
     1501 ccaacgaggc ggctccaatc tgctatagtt cacctcttcg gggcgtagcg cagcctggta
     1561 gcgcatctgc tttgggagca gagggtcgta ggttcgaatc ctaccgtccc gaccatttca
     1621 caaaaaccgt cattcagttc gctgggtggc ggtttttttt tcgggtggta ggttttaatg
     1681 tcgcatgcaa atgatgcgtc ataaaaaatt cacttgaagt tcacggcacc gaaacacgta
     1741 agcatcaaaa tgaaaacgtt ttcattgagc gtgccacttt atgagtattt tgcgcattgc
     1801 agagttgtcc ggcgtatcgc cagctactgt ctcgcgggtc tttaatagac ctcagcaagt
     1861 aagcgaagcg acgcgtgagc atgtcatgcg cattgctgac cacgtcgggt atcgccctaa
     1921 cgcggccgct cgcgcgctac gcactcagcg cagcagaatt ataggtgtga tgttaccgac
     1981 attacgtaac ccagtctttg ctgaatgtct ggaaggtatc gcccaaaaag cgttggatca
     2041 gggattcggc attatgccga ttgcctcggg ttatgaccag catcaagaag ctgccgcgat
     2101 tgccaccttg ttggcggcca atgtcgatgg tttggtgctg actgtaacgg acccaaagca
     2161 ctgcgcgccc gcactcgatg cgttagcgca aaaaaatgtg ccgtatgtcc ttgcctataa
     2221 ccaatcgcca gaccaccttt gtgtgggtgt aaacagtcaa gctgaggtga cccgcgctgt
     2281 tcaaagactc gtgaaagccg gtcatgaacg tattgcgatg ttaagcggcg aactagccgc
     2341 ttctgaccgt gcacacgcac gctatcaggg ttatctggct ggtatggctc tagcgcagct
     2401 gccatcgatg ccgct
//
LOCUS       DATBNL010000297         2081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_153047, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000297 DATBNL010000000
VERSION     DATBNL010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153047"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VIC30_04995"
     CDS             complement(<1..411)
                     /locus_tag="VIC30_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008448966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEY7803773.1"
                     /translation="MSETDKPSISYEDRIRADRTDSFDEELEMELDDDRLDDLLLAVP
                     PQGEEPEHAMNRRLYFKELFRLQGELVKLQDWVAHHKLKVVVLFEGRDAAGKGGAIKR
                     ITQRLNPRVCRVVALPAPSEREKTQWYFQRYVSHL"
     gene            798..1904
                     /gene="ydiK"
                     /locus_tag="VIC30_05000"
     CDS             798..1904
                     /gene="ydiK"
                     /locus_tag="VIC30_05000"
                     /inference="COORDINATES: protein motif:HMM:NF008216.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HEY7803774.1"
                     /translation="MIKLDLMRNVLVVAVMAGLLFLSAWVLLPFMAAGVWAAMIVVAT
                     WPLLMGLQRLFGGKRIFATVIMTLAIVLLLIIPLWLAITAVIEHSTEVSTWSSQLISQ
                     GLPPAPDWVSSVPVVGDRVAGAWNDLSAGGTTNLFQEYVAPHLTQAGQWALGQIGGLG
                     GVLISFFLMAVLAALMYQHGEQGADLVKRVAERLGGANGLAAVTLTGQAIRSVALGVF
                     VTALVQSLLGTIVLAIAGIPYAGFMGAVMLMLCVAQIGPSPVLVPVVVWMFWQGDSMG
                     WSIFLAVAGGLVIMLDNFLRPYLIRRGADLPLLLILLGVIGGMLTFGLIGIFVGPVVL
                     AVTYTLMMAWVEQAKAAEVQQRATSGISSPNQEK"
     gene            complement(1867..>2081)
                     /locus_tag="VIC30_05005"
     CDS             complement(1867..>2081)
                     /locus_tag="VIC30_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003803528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY7803775.1"
                     /translation="WISDSIPVALVMMAAMIGNMLVGAMVGVLVPMIRSRLGKDPAMG
                     SSVLLTFATDSLGFLIFLGLATIFLM"
BASE COUNT          433 a          533 c          614 g          501 t
ORIGIN      
        1 taggtgactg acatagcgtt ggaagtacca ttgggttttc tctcgttcgc taggggcggg
       61 caaggccacg acgcggcaaa cgcgcgggtt caagcgttgg gtgatgcgct taatcgcacc
      121 acctttgcct gccgcatcgc ggccttcaaa caacaccacg actttgagtt tgtggtgggc
      181 cacccagtct tgtaacttga cgagctcgcc ctgaagccga aacagctctt tgaagtacag
      241 ccggcgattc atcgcatgct caggttcttc accttgtggt ggtactgcaa gcaacaggtc
      301 gtctagtcga tcgtcgtcaa gctccatttc gagctcttca tcaaagctgt cagtgcggtc
      361 ggctctgatg cgatcctcgt agctaatgct gggcttatct gtctcggaca tgggggctcc
      421 tcttggtgac tggccggtaa acggttttga tgtgtagcga gcgcacaatc gtcaacgtat
      481 tggtcaacgt aatggtaatc ggagaaaaac cgctgatgac ggaatacgct ctacggtgat
      541 taattgggga tgctatttca caaacgtgac gctcacatga cagcgaggat aagccggaca
      601 tgaccgtctc ggtcgcgtgg ttaaatacgg gtcaacgata cggaaccgca aatgctacct
      661 caggcacgag tgccacggct aaagccggcg acaaattagt aaacgtgtgc ggcttgaggt
      721 cagcacaact cgcaatacaa cctgcaacac gacgtgcgat acaacgtgaa atacgataga
      781 ccaaacagga acccccgatg atcaaactcg atttgatgcg caatgtactg gtagtggcgg
      841 tgatggccgg attgttgttc ctgtcggcct gggtgctttt gccgtttatg gccgctggcg
      901 tgtgggcagc catgattgtg gtggcgactt ggcctttgtt aatgggctta caacgactgt
      961 ttggtggcaa gcggatattt gccaccgtca tcatgacgct agcgatcgtt ttactgctga
     1021 tcatacctct gtggttggcc attaccgcag tgatcgaaca cagcactgag gtgagcactt
     1081 ggtctagcca gcttatctcc caaggattgc cccccgcgcc ggactgggtg tcgtctgttc
     1141 cagtggtcgg tgatcgtgtt gccggtgcat ggaatgatct ttcagccggc ggtacaacca
     1201 atttgttcca agagtacgtg gctccacatt taacccaggc agggcaatgg gcgctgggcc
     1261 agatcggtgg tcttggcggt gtattgatct catttttttt gatggcggtt ctagctgcgc
     1321 ttatgtatca acacggtgag cagggcgctg acttggttaa gcgcgttgct gagcgtctgg
     1381 gcggcgccaa tggtttagcc gcggttacct taaccggaca agccattcgc agcgtggcgc
     1441 tcggtgtgtt cgtgaccgca ctggtgcaga gcctgctggg gacgatcgta ctggccattg
     1501 cgggtatccc gtatgccggg tttatggggg cggtcatgtt gatgttgtgc gtggcgcaga
     1561 tagggccgtc accagtactc gtgccagttg tggtctggat gttctggcaa ggcgacagca
     1621 tggggtggtc gatttttctg gcagttgccg gtggtttggt gatcatgctg gacaactttt
     1681 tacggcctta cctgatccgc cgcggcgccg atttgccact gctgcttatc ctgctcggtg
     1741 tgatcggcgg catgctgaca ttcggactca ttggcatttt tgtcggacca gtggtgctcg
     1801 cggttaccta cacgctgatg atggcctggg ttgagcaggc caaggcagcc gaagtgcaac
     1861 agcgcgctac atcaggaata tcgtcgccaa accaagaaaa ataagaaaac ccaaggagtc
     1921 agtcgcaaag gtcaacagca ccgaagaccc catcgccggg tctttgccga gtcgcgaacg
     1981 gatcatgggg accaacaccc ccaccatggc gccaactaac atgttgccaa tcatggctgc
     2041 catcatgacc agcgccacgg ggatggaatc cgaaatccac c
//
LOCUS       DATBNL010000298         3452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_112948, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000298 DATBNL010000000
VERSION     DATBNL010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112948"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VIC30_05010"
     CDS             <1..251
                     /locus_tag="VIC30_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016345739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEY7803776.1"
                     /translation="HTSDGHIVTAVQVAGLVAKRILCYAKPGQTLARGQRYGFIRFGS
                     RVDVYLPLGSSPRVAIGDKVSATTSVLAELAHGTKDQA"
     gene            248..1057
                     /gene="pssA"
                     /locus_tag="VIC30_05015"
     CDS             248..1057
                     /gene="pssA"
                     /locus_tag="VIC30_05015"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009521968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEY7803777.1"
                     /translation="MMNQEPGESNVSQDPKFPNEAERRRRGIYLLPNAFTTAALFSGF
                     YAVVQAMNGKFELAAIAIFIALVLDGMDGRVARLTNTQSAFGEQYDSLSDMTSFGVAP
                     ALVAYEFALSGLGRWGWLAAFVYVAGAALRLARFNTNIGVVDKRFFQGLPSPAAAALV
                     AGFVWLVQDNRLNLGDGWLAWTMFVITLYAGSSMVSNAPFYSGKSFALTRSVPFWVIL
                     LLVLGFVFVSSDPPVVLFGLFILYGLSGWIIWLWRVRKAKLSNFKPPNKGS"
     gene            complement(1093..1602)
                     /locus_tag="VIC30_05020"
     CDS             complement(1093..1602)
                     /locus_tag="VIC30_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017522652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803778.1"
                     /translation="MRKQLTLSVILGSVVLTGCTTLNQTPPGTPLTSVESEFGKPTLI
                     CEQPDGQQRVIWSQQPFGQYAWGTNVDDQGNVGEVVQLLDDRIFNQLSEGQWNPERVT
                     CEFGPPANIESVGMPSVRKTVWGYRYQQYGVWNMIMNVFFDPETMIVVDHYPTPDPMY
                     EYDGWSVFY"
     gene            complement(1608..2126)
                     /locus_tag="VIC30_05025"
     CDS             complement(1608..2126)
                     /locus_tag="VIC30_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803779.1"
                     /translation="MMTITHTARLTGLVASALIVTGCASVGSVKPGTTYNSLIEQYGT
                     PAVICPASDGTTRLVWSEGNAGEQAYAVTVDNQQRVSSVTQLMQQPAFDVLKQGQWNT
                     HDVRCQFGLPALVRSYGDTKSDMVWQYRFYGPGGEYDMLFVTFDRASGQMVSFSTGPD
                     PELNLTMLGGGR"
     gene            2313..2582
                     /gene="rpsO"
                     /locus_tag="VIC30_05030"
     CDS             2313..2582
                     /gene="rpsO"
                     /locus_tag="VIC30_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012401401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEY7803780.1"
                     /translation="MSVAEIKKSEIVSQFQRAQGDTGSPEVQVALLTARINELTGHFK
                     THMKDHHSRRGLLRMVSRRRKLLDYLKGRNPDAYRALIEKLGLRK"
     gene            2679..>3452
                     /locus_tag="VIC30_05035"
     CDS             2679..>3452
                     /locus_tag="VIC30_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY7803781.1"
                     /translation="MFNKVTQTFQYGQHTVTLETGEIARQASGAVVVSIEDTVVLATV
                     VAAKNAKPGQDFFPLTVDYVEKTYAAGKIPGGFFKREGRLSEKETLTSRLIDRPLRPL
                     FPEGFYNEVQVIIHVLSVDPEIDPDIAGMIGASAALAISGIPFNGPIGAARVGYLDDQ
                     YVLNPTAAQREASKLDLVVAGTQGAVLMVESEAKELPEDVMLGAVVFGHDAMQAAIGA
                     INELVRQAGKPEWDWQPAAQDEALISAVTTLAQEPLSQAY"
BASE COUNT          753 a          883 c          937 g          879 t
ORIGIN      
        1 tccatacgtc tgatggtcat attgtgactg cggtacaggt cgctggtctt gtggccaagc
       61 gtattctttg ctacgccaag cctggccaga ccttagcgcg tggtcagcgg tacggtttta
      121 tccgatttgg gtctcgggtt gatgtgtatc tgccgctagg ctcgagcccg cgggtagcca
      181 ttggggacaa agtgagcgcc actacatccg ttttggccga gttggcacac gggacaaaag
      241 accaggcatg atgaatcagg aaccaggcga gtctaacgtc agtcaagacc ccaagtttcc
      301 gaacgaggcc gaacgccggc gtcgaggcat ttatttgttg cccaacgcct ttacgaccgc
      361 agcattgttc tccggctttt acgcagttgt gcaagccatg aacggcaaat ttgaactagc
      421 tgccattgcg atttttattg cacttgtgct cgatggtatg gacggccgag tagcacgttt
      481 gaccaataca cagtcagcgt ttggcgagca atatgactcg ttatcggata tgacgtcgtt
      541 tggcgtggca cccgcgttgg tggcttacga gtttgcgtta agtggtctgg gacgctgggg
      601 ttggctggct gcctttgtgt atgtggctgg cgccgcatta cgattggctc gattcaatac
      661 caacattggt gtggtggaca agcgcttttt ccaggggcta ccgagcccgg ccgccgctgc
      721 gctagttgct ggcttcgtct ggcttgttca ggacaaccga ctaaatctcg gtgatggttg
      781 gttggcttgg accatgtttg tcattacgct ctatgcgggc agctccatgg tcagcaatgc
      841 tcctttctat agcggcaagt cctttgcatt gacgcgcagt gtgccgttct gggtgattct
      901 gctgctagtg cttgggtttg tgtttgtatc aagcgacccg ccagtggtgt tgtttgggtt
      961 gttcatcttg tacggattgt ctggctggat catttggctt tggcgagttc gcaaagcaaa
     1021 actgtctaac ttcaagccac caaataaggg ttcgtgatcc ttgtagactg acggttaggg
     1081 gatccccagg cttcaataaa aaaccgacca tccatcgtac tcatacatcg gatcgggtgt
     1141 tggatagtga tcgaccacga tcatggtttc gggatcaaaa aacacgttca tgatcatgtt
     1201 ccagacacca tattgctggt atcgataacc ccagacggtt tttctgaccg aaggcatccc
     1261 aacgctttca atattggccg gcgggccaaa ttcacaggtg acgcgttcgg ggttccactg
     1321 gccttcgctc agttgattga atattcgatc atccagcaat tgcacaactt cacctacgtt
     1381 gccttggtcg tccacattgg tgccccaggc gtattgccca aagggctgtt gagaccaaat
     1441 cacacgttgc tgcccatcgg gttgttcgca aatcaacgtt ggcttgccaa actcagactc
     1501 aacgctcgtc agtggcgtgc caggtggggt ttggttgagc gtggtgcaac cggtcagcac
     1561 cactgagccc aagatgacac tcaaggtgag ttgtttacgc atgctgttta gcgcccacca
     1621 ccgagcattg tcagattgag ctcaggatca gggcctgtac taaagctcac catctgaccg
     1681 gatgcgcggt caaaggttac gaacaacatg tcgtactcac cacccgggcc ataaaaccta
     1741 tattgccaga ccatgtcgct cttggtatca ccgtatgaac gcactaaagc gggtagcccg
     1801 aactgacagc ggacatcatg cgtgttccat tgtccttgct tgagtacatc aaatgcgggt
     1861 tgctgcatga gttgcgtcac acttgagacg cgttgttgat tgtccaccgt gactgcgtag
     1921 gcctgttcac cagcattgcc ttcggaccaa accaggcgtg tagtgccgtc actggccggg
     1981 caaataaccg ctggggttcc gtattgctca atcaggctgt tgtatgtcgt gccaggtttg
     2041 acgctgccca cggatgcgca gcccgtcaca atcagggcgc tggcaacaag accggtcaag
     2101 cgggcggtgt gagtgatggt catcatgatg tacatcctag tttaaaggta agtggattac
     2161 cctataaagt aagctataat tttcaactta agcaattgtt ttaacaacga ttgtgtaaaa
     2221 agttgcttaa accatccgtc ggacatggtt gtctggtggc ttcaaatcac gcataggcac
     2281 ctcggcttac gcgccagtcg atagaggata ttatgtcagt agcagaaatc aaaaaatcag
     2341 aaatcgtctc ccagtttcag cgtgcccaag gtgacaccgg atccccagag gtccaggtgg
     2401 ctttgctgac agctcgtatt aacgagttga cagggcactt caagacccac atgaaagatc
     2461 atcactcgcg tcgcggtctg ctgcgcatgg tcagccgccg tcgcaagctg cttgactatc
     2521 tcaagggccg taaccctgac gcctatcgcg ctttgattga aaagcttggt ctgcgtaagt
     2581 gatccacgtt tgtgggatga aatcccaaga ttgaccgtga ccgtggtggc attgtgctgc
     2641 tgcgctcacg gtttttcatt tgcaaggaat gtatcgcaat gttcaacaaa gttactcaaa
     2701 ccttccagta cggccagcac acagtcacac tggaaacagg cgaaatcgcc cgtcaggcct
     2761 caggcgctgt cgttgtctcg attgaagaca ccgttgtatt ggcaactgtg gtcgcggcaa
     2821 agaatgcaaa gccaggtcag gacttcttcc cgctaaccgt tgattacgtc gaaaaaactt
     2881 atgccgccgg aaagattcct ggcggctttt ttaagcgcga aggtcgtttg tccgagaaag
     2941 agacgctgac ctcacgcctg atcgatcgcc cgttgcgccc tttgtttccc gagggtttct
     3001 acaacgaggt gcaggtcatc attcatgtat tgtccgttga ccccgaaatt gaccctgaca
     3061 ttgccggcat gattggtgct tcggctgcgt tggcgatctc tggtatcccc tttaacggtc
     3121 ctatcggtgc tgcccgcgtc ggttacctcg atgaccagta tgtgttgaat ccaactgccg
     3181 cacaacgaga ggcttctaag ctagacctcg tggtggctgg cacacaaggc gcggttctca
     3241 tggttgagtc cgaagccaaa gagctgccgg aagatgtcat gcttggtgct gtggtgtttg
     3301 gccatgatgc gatgcaggct gccattggcg ccatcaatga actcgtgcgc caagcaggca
     3361 agcctgaatg ggattggcag ccagcagcac aagatgaggc actgatttca gctgtcacaa
     3421 ccttggcaca agaacctctg tcgcaggcct ac
//
LOCUS       DATBNL010000299         2595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143141, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000299 DATBNL010000000
VERSION     DATBNL010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143141"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VIC30_05040"
     CDS             complement(<1..710)
                     /locus_tag="VIC30_05040"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7803782.1"
                     /translation="MDIDKSSPTAATTATPEAVDRYQSLVALLQEAFVTHRDRVALVS
                     LGAELTYGELDKQSHAWAAWLQSLDLPVGSRVAIMLPNMLASPVTLIGTLRAGCVAVN
                     VNPLYTARELQAQLRDCRPDVIVLFEAFAATLQQVPATDRPKHVVIATVGDLMPKIKG
                     VLVNAVVRHVQRKVPAWHLSGTQQLTHTLSKGAQLSFAAPDIKPGDLAFLQYTGGTTG
                     EPRAAMLSQRNVVANIMQV"
     gene            789..1994
                     /locus_tag="VIC30_05045"
     CDS             789..1994
                     /locus_tag="VIC30_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEY7803783.1"
                     /translation="MQLLEPFLQWQDEIKGIRRDIHAHPELAYQELRTSDLVAKLLTD
                     WGIEVDRGLGGTGVVGIIRGSQPHAKDNAIGLRADMDALPMQELNTFEHASQHAGTMH
                     GCGHDGHTAMLLNAARYLANHRDFAGTVYLIFQPAEEGAAGAKRMIEDGLFKKFPMRA
                     VFGMHNWPGLATGTFGVTPGPIMASSNEFVIDIKGKGAHGGMPHLGHDPVMATVNVAQ
                     SLQTIISRNCHPLESGVVSVTQIHTGSAMNVIPTDAQLMGTVRTFTNETLDLIEQRMG
                     EIVEHTSRAMNCEGSLKFRRNYPPTVNAQAETEFCVEVMQEIVGAKNVEANVVPTMGA
                     EDFAFMLQEVPGCYVWIGNGMGEHRDAGHGLGPCMLHNGSYEFNDELLPLGGTYWVKI
                     VERWFDKQA"
     gene            2013..>2595
                     /locus_tag="VIC30_05050"
     CDS             2013..>2595
                     /locus_tag="VIC30_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY7803784.1"
                     /translation="MAQQEDTDQATEANLPRRLDPEDAQLALTRVQEQLRRHAVVEHL
                     VHRQEEGQQSAPVVENLLQRQHETELRGLVNSLHPADIAFILESLPKDDRQMIWQLVR
                     AEFDADVLIEVADWVRQSLIETMDRADLVAATENMDADEIADLIANLPPDVVAEVQKG
                     LTPKERAQLIEAMGYPEDSVGGIMDFDMLRVRDD"
BASE COUNT          607 a          733 c          729 g          526 t
ORIGIN      
        1 acctgcatga tgttggccac cacgttgcgt tggctaagca tcgccgcacg tggctcaccg
       61 gtggtgccac cggtgtactg taaaaacgcc aaatcgcccg gcttgatatc tggcgcagca
      121 aatgacaact gcgcgccttt gctaagcgtg tgcgttagct gctgcgtgcc tgataagtgc
      181 caggctggca ctttacgctg tacatggcgc accacggcat taaccaaaac acccttaatc
      241 ttgggcatca aatcacctac cgtggcaatc accacatgct tggggcggtc ggtagcaggc
      301 acctgctgca aggtagccgc aaaggcctca aacaacacga tgacgtcggg acgacagtca
      361 cgtaactgcg cctggagctc gcgcgcggtg taaagcggat tgacattgac cgctacacaa
      421 cccgcccgca gcgtgccaat caatgtcact ggactggcta acatgttcgg taacatgatc
      481 gccacacgcg accccacggg aaggtcaagc gactgcaacc aagctgccca ggcgtgtgac
      541 tgtttatcta gttccccgta agtcaattca gcaccaagcg acaccagcgc gaccctatct
      601 cggtgggtca caaacgcctc ttgcagcagt gccactaagg attggtagcg gtcaacggct
      661 tctggggttg ccgtggtcgc tgctgtaggg ctagatttgt cgatatccat acaagagact
      721 attttgactg ttttaagaca cgtgtttgcc gtcataatac ctagcaacgc gcttagtcgg
      781 agaaattcat gcaactgcta gaaccctttt tacagtggca agacgaaatc aaaggcatac
      841 gccgagacat tcacgcccat cccgagctgg cttaccagga gttgcgcacc tcagatctgg
      901 tcgccaaact attgactgac tggggtatcg aggtcgatcg tggacttggt ggcaccggtg
      961 tggtgggcat tattcgcggc agtcagccac acgccaaaga caacgccatt ggtctgcgcg
     1021 ccgacatgga cgccttaccc atgcaggaac tcaatacgtt tgagcatgcc agccagcacg
     1081 cgggcaccat gcacggctgc ggccatgacg gccacacggc catgctactt aacgcagcgc
     1141 gctacctggc caaccatcgt gactttgctg gtaccgtgta tttgattttt cagccagctg
     1201 aagaaggtgc ggccggtgcc aaacgcatga ttgaagatgg gttgttcaaa aaattcccaa
     1261 tgcgcgcggt gtttggtatg cacaactggc cgggtttggc cacaggtacc tttggtgtca
     1321 ccccaggccc catcatggcc tcaagcaacg agtttgtcat cgacatcaag ggtaagggtg
     1381 cgcacggcgg catgccgcat ctcggtcatg atcccgtcat ggccacggtc aacgtggcgc
     1441 aatccttgca aaccatcatc agtcgtaact gccatccgct agagtctggc gtggtgagtg
     1501 tgactcaaat tcacaccggc agcgccatga acgtcatccc caccgatgca cagctcatgg
     1561 gcacggtgcg caccttcacc aacgagacgc tagatctgat cgagcagcgc atgggggaaa
     1621 tcgtcgaaca caccagtcgc gccatgaact gcgaggggtc actgaagttt cgtcgcaatt
     1681 acccgcccac agtcaatgcc caggcagaga cggaattctg tgttgaggtg atgcaagaaa
     1741 ttgtcggcgc caagaacgtt gaggccaatg tggtacccac catgggcgca gaggatttcg
     1801 cctttatgtt gcaagaggtg cccggttgct acgtctggat tggtaacggc atgggtgaac
     1861 accgcgatgc cggtcatgga ctcggaccct gcatgctgca caacggctct tacgaattta
     1921 acgacgaact gctgccgctt ggtggcacct actgggtcaa gatcgtcgag cgctggtttg
     1981 acaagcaggc ctgatcgacc cgggataaac agatggcgca acaagaagat acagatcagg
     2041 caactgaagc aaacctgccg cgacggctcg acccggaaga cgcgcagtta gcactcacgc
     2101 gggtgcaaga gcagttgcgc cgtcatgcgg ttgtcgagca tctggtgcat cggcaagaag
     2161 aaggtcagca aagcgccccc gttgtagaaa acctgctgca gcgtcaacat gagaccgaac
     2221 tgcgtggttt ggtcaactcg ttacaccccg ctgacattgc cttcatcctg gagtcgttgc
     2281 ccaaagacga tcgccagatg atttggcagc tggtgcgcgc cgagtttgat gctgacgtgc
     2341 tcattgaagt ggccgattgg gtgaggcaat cgctcatcga aaccatggat cgtgccgatc
     2401 tcgtggcagc caccgagaac atggatgccg atgagattgc cgatctgatc gccaatctcc
     2461 cacctgatgt ggtggccgaa gtacaaaaag gcctgacccc aaaagagcgc gcccaactga
     2521 tcgaagccat gggctaccct gaggacagcg tgggcggcat catggacttt gacatgttgc
     2581 gcgtgcgaga cgaca
//
LOCUS       DATBNL010000300         3630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_23315, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000300 DATBNL010000000
VERSION     DATBNL010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23315"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VIC30_05055"
     CDS             <1..926
                     /locus_tag="VIC30_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008334733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HEY7803785.1"
                     /translation="ISSPLSAPTACSRLSTYLTYGCLSMREVFQSTEAHIRTLPAGRS
                     RHKQGLQSFVSRLYWHCHFIQKLEDEPALEFRNLHRGYDGLRENDWSQARFDALTTGR
                     TGWPLVDACVAMLAHTGWLNFRMRAMLVSVAAYPLWLHWHPVGHWLARQFLDYEPGIH
                     WSQMQMQSGTTGINVPRIYNPIKQARDHDPDGLFVRQWLPAMRRVPDMWLFEPWRMPQ
                     NIQAACGVVVGQDIASPLCDLEIATREAKHKVFGLRANPAVRAAKGAIVKKHGSRKQL
                     DSTPARKSSGATRRKKTAAPASTSTQLSLDF"
     gene            929..1081
                     /locus_tag="VIC30_05060"
     CDS             929..1081
                     /locus_tag="VIC30_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007848658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2256 domain-containing protein"
                     /protein_id="HEY7803786.1"
                     /translation="MRGVKKSNLPQKTCLTCQKPFVWRKKWESVWDEVKYCSERCRRN
                     RTQKSS"
     gene            1078..2385
                     /locus_tag="VIC30_05065"
     CDS             1078..2385
                     /locus_tag="VIC30_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004634946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003913 - DNA photolyase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASH family cryptochrome"
                     /protein_id="HEY7803787.1"
                     /translation="MTILYWFRQDHRLSDNPALTRACTITKETHQPLLPVTLRSAEQA
                     TDWGFTRLGAHRKAYEAQSLSALADSLRSIGSNLYQPENPGCEGLIALARQVNASCIV
                     CESIQAPYELDEIKAITHAGIKVETIEQAALLPHDSLPFEVSNTPTVFSDFRRQVEKA
                     KSLPRTPLARPTNLPPLPDGISGAVPYTAEIALPSLDARSALPYQQEPWQGGQASGQA
                     HLARYFASTLPGHYKASRNGLVGNDYSTKFSPWLATGAVSAAQIWQALQNHEAAYGGN
                     DGTYWIWFELLWRDHFRLMMQRFGRRLFRYAGLAKPPHQMVNTPPKHNQQGFDRWRHG
                     LTGHAFIDAGMRELAATGYLSNRMRQNVASYLIHDLGCDWRAGAAWFEHCLVDFDVHS
                     NQGNWAYIAGVGTDPRGGRRFNPDKQAHDYDRDASYRNLWSDD"
     gene            2382..>3630
                     /locus_tag="VIC30_05070"
     CDS             2382..>3630
                     /locus_tag="VIC30_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017424528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cryptochrome/photolyase family protein"
                     /protein_id="HEY7803788.1"
                     /translation="MTILRLILGDQLNSQHSWFKSVEPDVHYVMMEVRQETDYVMHHA
                     QKVLGIFAAMRAFAEHLRQAGHSVHYLAIDDIANTTNTHDIPTNLTQLAHKIGATRIE
                     YQAPDEWRLDDQLSTWATDSEFTVSMVDTEHFLTERSTASELFKGRKRWLMEQFYRTL
                     RQQHGVLMDGKDPVGGQWNFDAENRKAWKGQPPPPADPRPVHDHRELWQTITDAGVKT
                     FGNPQADAFRWPVNRTEALVQLEHFMQHVLPNFGDYQDAMHTDEPFLFHSLLSFALNT
                     KMLSPKEVIAAAEQAWRDGHAPLPAVEGFIRQILGWREYVRGVYWSQMPGYTASNALA
                     HDTPLPDWFWDGQTRMQCLSQSIGQSLEHAYAHHIQRLMIIGNFALLAGVDPQAVHRW
                     YLGVYIDAFEWVEAPNTLGMSQFA"
BASE COUNT          829 a         1079 c          970 g          752 t
ORIGIN      
        1 gcatctcctc gccgctgtca gcacccacgg cctgctcgcg tctgtctacc tatttgacct
       61 atggttgcct gtccatgcgc gaggtgtttc aaagcactga agcccatatt cgaacactac
      121 cagctggtcg tagccgccac aaacaaggcc tgcagtcgtt tgtcagccgg ctttactggc
      181 attgtcattt catccagaag ctagaggacg agccggcgct agagtttcgc aacctacatc
      241 gtggttacga tgggctacga gaaaacgatt ggtctcaagc acggtttgac gcattgacta
      301 cagggcgcac cggttggcca ctcgttgatg cctgtgtggc catgctggca cacaccggtt
      361 ggttaaattt ccgcatgcgt gccatgctcg tatcggttgc cgcctacccc ctgtggttgc
      421 actggcaccc ggtgggacat tggttggcac gccagtttct agactatgag ccaggcatcc
      481 actggagcca aatgcagatg caatcaggca ccaccggcat taacgtgcca cgcatctaca
      541 accccattaa acaagcccgc gatcatgacc ctgacggatt atttgttcgc cagtggctac
      601 ccgccatgcg gcgtgtgcct gacatgtggt tgtttgaacc gtggcgcatg ccccagaata
      661 ttcaagccgc ctgtggcgtc gtggtcggtc aagacattgc cagcccgctg tgcgatctcg
      721 aaatcgccac acgcgaggcc aagcacaagg tgttcgggct gcgtgccaat cctgccgtgc
      781 gcgccgccaa aggtgccatc gttaaaaaac acggttcgcg caaacaactc gattccacac
      841 cggctcgcaa gtcatctggc gcaacacgcc gtaagaagac agcagcaccg gcttcaacct
      901 ctacccaact aagcctggat ttctaaacat gcgcggcgtt aaaaaatcca accttcccca
      961 gaaaacctgc ctgacctgtc agaagccgtt tgtttggcgt aaaaaatggg aaagtgtctg
     1021 ggacgaggtt aagtactgct ctgaacgctg ccgccgtaac cgaacacaaa aaagctcatg
     1081 actatccttt actggtttcg ccaggaccac cgactatcag acaacccggc gcttacccgg
     1141 gcgtgcacca tcaccaaaga gacccaccag ccattacttc ctgtgacgtt gcggtcggcg
     1201 gagcaagcaa ccgactgggg gttcactcgg ttgggcgcgc accgcaaggc ctatgaagcc
     1261 caatcactga gcgcgctagc agacagcctg cgctcaatcg gcagcaacct gtatcagccc
     1321 gagaatccgg gatgcgaagg gctcattgcg ctcgcacgcc aggtcaatgc cagctgcatc
     1381 gtctgcgagt cgattcaagc gccctacgag ctcgacgaga ttaaagccat cacgcacgcc
     1441 ggcatcaagg tagaaaccat tgagcaggct gcactgctgc cccacgacag cctgccattt
     1501 gaggtcagca acacacccac cgtgttcagt gatttccgtc gccaagtgga aaaagccaag
     1561 tcgctgccgc gcaccccgct ggcgcggccg acgaacttgc ctccattgcc cgacgggatc
     1621 agcggcgctg tgccttacac cgcagagatt gctttgccaa gccttgacgc acgcagtgca
     1681 cttccctatc agcaagaacc ttggcaaggc ggtcaagcca gtggccaagc tcatctggca
     1741 cgctactttg ccagcacctt gccgggtcat tacaaggcaa gtcgcaacgg cttggtcggc
     1801 aacgactatt ccaccaagtt ctcaccgtgg ttggccaccg gtgcggtttc agcagcgcag
     1861 atctggcagg ctttacagaa ccacgaggct gcctacggtg gcaacgacgg tacgtattgg
     1921 atctggtttg agctactgtg gcgtgaccac tttcgattga tgatgcagcg ctttgggcgt
     1981 aggctgtttc gatacgcggg cttggccaaa ccaccgcatc agatggtaaa caccccaccc
     2041 aaacacaacc aacagggctt tgaccggtgg cgtcacggcc tgactggaca tgcattcatt
     2101 gacgccggta tgcgtgaact cgcagccacg ggctatttgt caaaccgcat gcgacaaaat
     2161 gtcgctagct acctgattca cgatctgggc tgtgactggc gggcgggtgc agcctggttt
     2221 gaacattgtt tggtggattt cgatgtgcac agcaatcagg gtaactgggc ttacattgct
     2281 ggcgttggca ccgacccacg cggtggccgc cgctttaacc ctgacaaaca ggcacatgat
     2341 tatgatcgtg atgccagcta ccgtaatctg tggagtgatg attgactatc ttgcgactga
     2401 tcctcggtga tcaactcaat agccagcaca gctggtttaa atctgtcgaa cccgacgtgc
     2461 actacgtcat gatggaagtg cgtcaggaaa cggactatgt catgcatcat gcacaaaagg
     2521 tccttggcat atttgcggcc atgcgtgcct ttgctgaaca tttgcgccag gccgggcact
     2581 ctgttcacta cctggccatt gatgacatcg ccaacaccac caacacgcac gacatcccga
     2641 cgaacctgac ccaactggcc cacaaaatcg gggccaccag gatcgaatac caagcacctg
     2701 acgaatggcg cctcgatgat cagttaagca cgtgggccac agacagcgag ttcaccgtct
     2761 cgatggttga caccgaacac tttctaaccg agcgctctac agcctctgaa ttgttcaagg
     2821 gccgcaagcg ctggttaatg gagcagttct atcggacctt aaggcagcaa cacggggtgc
     2881 tgatggacgg caaggaccct gttggtggcc agtggaattt tgatgcggag aatcgcaaag
     2941 cctggaaagg ccagccccca ccgcctgcag acccacgtcc tgtgcacgac caccgagaac
     3001 tctggcaaac catcacagat gccggcgtta aaacctttgg caacccgcaa gcagatgcct
     3061 ttcgatggcc ggtgaatcgc accgaggcat tggtgcagct tgagcacttt atgcaacacg
     3121 tgctgccaaa ttttggggac tatcaagacg ccatgcacac cgacgagccg ttcctatttc
     3181 acagcttgct gtcgtttgca ctgaacacca aaatgctaag cccaaaggag gtgatcgctg
     3241 cggctgagca ggcttggcgc gacggtcatg caccgctgcc agccgttgaa ggctttatcc
     3301 gacaaatact gggctggcga gagtatgtgc gcggtgttta ctggtcacaa atgccaggct
     3361 acaccgcgag caatgcactg gcgcacgaca cgcccttacc cgattggttc tgggatggac
     3421 aaacgcgcat gcagtgcttg agtcaatcca tcggtcagtc gctagagcat gcgtacgccc
     3481 accacattca gcgactgatg atcatcggca actttgcgct gctcgcaggc gttgatccgc
     3541 aggctgtgca ccgctggtac ctcggggtgt atatcgatgc ctttgaatgg gtcgaagcac
     3601 ccaatacgct tggcatgagt cagtttgccg
//
LOCUS       DATBNL010000301         2339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_172556, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000301 DATBNL010000000
VERSION     DATBNL010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172556"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VIC30_05075"
     CDS             <1..1110
                     /locus_tag="VIC30_05075"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY7803789.1"
                     /translation="QTLQSRINGGYDTLDLDFNDRGIQTLGNTIVSSRNQIHDRWLST
                     LSASFMTEKNETENSPTGGGDGYFRSKQQQYQWLNRFELTDNQNLTLGAERLNQSVDA
                     YSFGSTVDFDNDSLFTNSLMAIYNGQWGIHGVQASLRNDHNSQYGNFTTGSLGYAIDI
                     TSQWRANVSANTAFRAPTFTELYYPGFGNPDLEPERSRNIEFGLTYRHNTGELGITGF
                     YNQIKDLIVSQSPTFIPQNVDSAVIKGLTLTATQNIGSNTVVNASLDLLSPYNTSNDE
                     RLPFNAEQVLRVNGSHQMGDFAVNADWYLTSNRKDGTNTLGGYGLFNLGASYTANKHL
                     EFQIQWNNVFGKDYTLVRGYNTPGSNVFFNVKATY"
     gene            1091..1894
                     /locus_tag="VIC30_05080"
     CDS             1091..1894
                     /locus_tag="VIC30_05080"
                     /inference="COORDINATES: protein motif:HMM:NF038402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HEY7803790.1"
                     /translation="MSKPLTSLRHWGALCLWAWCAVAFADTARIVTLTPHATEMVFAA
                     GAGHQIVGTVESSDFPKAAQSIARVGDGLNTSAEQVLALDPDWVVGWSSPLISQLQSL
                     GVKTIVSNPTSLQAIGQEVLRLGELFGTSDRAQAWHTEFEKAVGELGNPDISRPIQVV
                     ILASSDGQFVIGRDALINDTLKRCGATNPFAATQAAAPQISRESLIAAEPDVMISGRQ
                     FDGAQPMTLTVPLAVIDADSLYRPGPRFIEAARTICTLVREAQQKRASP"
     gene            1910..>2339
                     /locus_tag="VIC30_05085"
     CDS             1910..>2339
                     /locus_tag="VIC30_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEY7803791.1"
                     /translation="MSTTDPLVIANQTYQSRLLVGTGKYESFAQTRAAIDASGAEIVT
                     VAIRRTNIGQNAGEESLLEHLPPDQFTILPNTAGCYSADDAVRTLRLARELLDDHRLV
                     KLEVLGDPHTLFLNMPETLAAAKTLVAEGFDVMVYCTDDPI"
BASE COUNT          573 a          683 c          589 g          494 t
ORIGIN      
        1 caaaccttgc aatcacggat caatggcgga tatgacacct tggacttgga tttcaatgac
       61 cgcggcattc aaaccttggg caacaccatc gtcagttcac gcaatcaaat ccatgatcgt
      121 tggctcagca cgctgtcagc gagctttatg acagaaaaaa atgagaccga gaacagcccg
      181 actggtggcg gtgacgggta tttccggtcc aaacaacagc agtaccagtg gttaaaccga
      241 ttcgaactca cagacaatca gaacctgacc ttgggagctg aacgcctgaa ccaatcggtc
      301 gatgcctact cgtttggctc aaccgtcgac tttgataacg acagcctctt taccaactca
      361 ctcatggcca tctacaacgg gcaatggggt atccatggtg tacaggcgag cctacgtaat
      421 gatcacaact cgcaatacgg caacttcacc accggcagcc tcggttatgc cattgacatc
      481 accagccagt ggcgcgccaa cgtctcggcc aacaccgcgt ttcgggcacc gacctttacc
      541 gaactctatt acccggggtt tgggaatcct gaccttgagc ctgaacgttc acgcaacatc
      601 gagtttggac tgacctaccg gcacaacaca ggcgaacttg ggataaccgg cttctacaac
      661 caaatcaaag acctgattgt gtcgcagtca ccgacgttta tcccgcaaaa cgtcgattcc
      721 gcggttatta agggactgac gttgaccgcc acacaaaaca tcggctcaaa cacggttgtc
      781 aacgcaagcc tcgatttgct gagcccctac aacaccagca atgatgagcg cctgccattt
      841 aatgccgagc aggtgttgcg tgtgaacggg tcacatcaaa tgggggactt cgctgtcaac
      901 gccgattggt acttaaccag caatcgtaaa gacggcacca acaccctcgg cggctatggg
      961 ctctttaacc tcggtgccag ctacacggcc aacaagcacc ttgaattcca gattcagtgg
     1021 aacaacgtgt tcggcaaaga ctacactttg gttcgaggct acaacacgcc aggctccaat
     1081 gtatttttta atgtcaaagc cacttactag tttgcgccac tggggcgcac tatgcctttg
     1141 ggcatggtgc gccgtagcgt ttgcagacac ggcccgcatt gtcacgctca cgccacatgc
     1201 caccgagatg gtgtttgccg cgggcgcagg ccatcagatc gtgggtaccg ttgagtcaag
     1261 tgattttccg aaagcggcac aatccatcgc tcgcgtcggt gatggactga acaccagtgc
     1321 cgagcaagtc ttggcactgg atcctgactg ggtggtggga tggtcatcac cgctgatatc
     1381 gcagctacaa agcctaggag ttaagaccat tgttagcaac cccacctcac ttcaagccat
     1441 tggccaagaa gtcttgcgtc tcggtgaact gtttgggacg tcggatcgcg cacaagcctg
     1501 gcacactgaa tttgaaaaag cggttggcga acttggcaac cctgacataa gccgacccat
     1561 ccaagtggtg atcttggcca gcagcgatgg tcagttcgtc attgggcgcg atgcattgat
     1621 caatgacaca cttaagcggt gcggtgcgac caatcccttt gcggcaacgc aagcggctgc
     1681 cccgcaaatc agccgtgaga gcttgattgc cgccgagccc gatgtcatga ttagtggcag
     1741 acagttcgat ggcgcccaac ccatgacgct aacagttcct ttggcggtaa ttgatgcgga
     1801 ttcgctgtat cgtccgggtc caaggtttat cgaagccgct cgcacgatct gtacacttgt
     1861 acgagaggct caacaaaagc gcgcctcacc atagcaatag gaaacctgta tgagcaccac
     1921 agacccactg gtcattgcca atcaaaccta tcagtcccgt ctgctcgtag gcaccggcaa
     1981 gtatgagagc ttcgctcaaa cccgtgccgc catcgatgcc agtggcgccg agatcgtaac
     2041 cgttgccatc cggcgcacca acatcggtca aaacgccggt gaagaaagct tgctcgagca
     2101 cttgccaccc gatcaattca cgatcttgcc caacaccgct ggctgctaca gcgccgacga
     2161 cgcggtacgc actttacgcc tggcacgcga gctgcttgat gaccaccgct tggtcaagct
     2221 cgaggtgctc ggtgacccgc acacactgtt tctcaatatg cctgagacac tggccgcagc
     2281 caaaacgctg gtagcagagg gctttgatgt catggtttat tgcaccgatg accccattc
//
LOCUS       DATBNL010000302         1629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73303, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000302 DATBNL010000000
VERSION     DATBNL010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73303"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VIC30_05090"
     CDS             complement(<1..241)
                     /locus_tag="VIC30_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803792.1"
                     /translation="MKNVVTNVAMRSAFACLMAVAGFMLAPHAMAFEVGHSRVVSAPG
                     QPLAVVVPVKGLNASDGASLAVRLASPEQWQAAGLT"
     gene            complement(347..1474)
                     /gene="asd"
                     /locus_tag="VIC30_05095"
     CDS             complement(347..1474)
                     /gene="asd"
                     /locus_tag="VIC30_05095"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEY7803793.1"
                     /translation="MGSAVGFVGWRGMVGSVLMQRMRDENDFAGIDPVFFSTSNAGGR
                     APDWAGESLLQDAHDLETLRKLPIIVTTQGGDYTSAVHAKLRASGWQGHWIDAASTLR
                     MSPEAVIVLDPVNRTVIDRAMAKGTKDFVGGNCTVSCMLMGLAGLFNAGLIEWMTSMT
                     YQAASGGGAQHMRELLKQFGLLNERVSAELADPASAILAIDKAVLDLQRSGELPVDNF
                     GVPLAGNLIPWIDKDLGNGVSREEWKAGAETNKILGRGEGFDQPAIPIDGLCVRIGAM
                     RCHSQALTIKLTKDVPLDEITERLENGTPWAKVIPNSKEATMADLSPVAVTGTLDIPV
                     GRLRKMSMGPQYLSAFTVGDQLLWGAAEPLRRMLNILLERA"
BASE COUNT          413 a          487 c          376 g          353 t
ORIGIN      
        1 tggttagtcc cgctgcctgc cattgctcgg ggctagctag tctgaccgcc agagaggcgc
       61 catcgctagc gttcaaaccc ttaacaggca caacaacagc caaaggttga cccggcgcgg
      121 aaactacccg gctgtgaccc acctcaaatg ccatcgcatg tggcgcgagc ataaaaccgg
      181 caacagccat taagcaagcg aacgcagagc gcatcgccac attcgtcaca acatttttca
      241 tattattttt catagtagcc aaagcttaaa tctgtacgaa cacgtacgat acgagcgaat
      301 tacttgttat tcgatctaaa ttgccagcaa ctttaacaaa agcgtcttat gcgcgctcaa
      361 gtaagatgtt caacatgcgg cgcaacggct cggccgcacc ccataaaagt tggtcgccga
      421 ccgtgaaagc gctcagatat tgcgggccca tgctcatttt gcgtaggcgt ccaaccggaa
      481 tatcaagcgt accggtcacc gcaaccggcg acaaatcagc catggtcgct tccttggaat
      541 tagggatgac tttggcccaa ggtgtgccgt tttctaggcg ttcagtaatc tcatcgagcg
      601 gcacgtcttt ggtcagtttg atcgttaatg cctggctgtg gcatcgcatc gcaccaatac
      661 gcacacacaa tccatcaatg ggaatagcag gctgatcaaa gccctcgccg cgcccgagta
      721 tcttgttggt ctcagcgccc gctttccatt cttcgcgcga gacgccgttg cccagatctt
      781 tgtcgatcca tgggatcaag ttgccggcca acggcacacc aaagttgtca acgggtaatt
      841 caccacttct ttgtaaatcg agtaccgctt tgtcgattgc cagaatcgca gaggccggat
      901 cagccaactc agcactaacc cgttcattta acaacccgaa ttgcttgagc aattcacgca
      961 tgtgttgagc gccacccccg gatgccgctt gataagtcat gctggtcatc cactcaatca
     1021 aaccagcgtt aaatagtcca gccagtccca tgagcatgca agagaccgtg cagttaccac
     1081 cgacaaagtc ttttgtacct ttggccattg cacgatcgat aacagtgcgg ttaaccggat
     1141 ccaagacaat aaccgcctca gggctcatgc gcagcgtact tgcagcgtca atccaatgcc
     1201 cttgccaacc agacgcgcgt aacttggcgt gcacggccga ggtgtaatcg ccaccttgtg
     1261 tggtgacaat aatgggcagt tttcttaaag tctcgaggtc gtgcgcgtct tgcagcaacg
     1321 attcgccagc ccaatccgga gctcggccac ccgcgttact ggtcgaaaaa aacaccgggt
     1381 cgatgccggc aaagtcattc tcatcgcgca tgcgttgcat gagcacagag cccaccatgc
     1441 cacgccaacc cacaaaacct acagctgaac ccatcagata tcgcctcaaa aaaaccggct
     1501 aaccagtcag accttaatta aagccaaaac ctcaacgcca acggcgctgc tcactggtcg
     1561 cccatagcga tatcataccg tgtcaagcgc tttgagcacg gcgtcgccca tctctgaagt
     1621 accaacttt
//
LOCUS       DATBNL010000303         2101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143168, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000303 DATBNL010000000
VERSION     DATBNL010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143168"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VIC30_05100"
     CDS             complement(<1..653)
                     /locus_tag="VIC30_05100"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEY7803794.1"
                     /translation="MLPYAEFLDVAVRAAHAGAAVLQNHRGAREKLVIDRKGRNDLVS
                     QADREAESAVIEILRSETPELGIIGEESGGELGSQATWYVDPLDGTTNYLHGMEHYAV
                     SIGLVAHAGAPDAMGQPLTHDLPIVGVVYDPNREEMFTALQGVGAWMNGHRIHCTKVD
                     QASDALIATGIPVRSFEYLDPYLAALKELVLNTRGVRRQGSAALDLCWLAAGRVDAY"
     gene            765..1973
                     /locus_tag="VIC30_05105"
     CDS             765..1973
                     /locus_tag="VIC30_05105"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7803795.1"
                     /translation="MSNTEQPRLVNKDQSPAKCDEVCSDILVVGGGIAGSTVAAVLAQ
                     SDLQVSVIDPMQTHGTHLAAALTPVISSDNNARSRLSRLGAALAGQWWQQFGSEVVST
                     EVASPCGAIQLQRPEGAKRVTDLKAQAQTFAQPDWARWVERDEASALAGLPLPRGGIW
                     YPGGWLVRVPKLIKAMQSMPGVTLHRFAVGQLRRVATGWLALDASGEPIAQGRHVVLA
                     NAFDVLGLLERSGLEDVLAGCARLPAMHRLAGEITLLPAQALSGGPKCIVGGDGYVLP
                     SVDGWCVSGGTYVRDADQAGCTEAGRMANWTRAQQLLDINVDQSKGVESLPGWAGWRA
                     VLPGRLPAIGALPGVVGLWTTTAGASRGLTWSVLGANLIRDQILGRENGLESEQGFGL
                     DQAMRQAICP"
BASE COUNT          422 a          554 c          648 g          477 t
ORIGIN      
        1 caataggcat caacccggcc ggccgccagc cagcaaaggt ccagtgcggc tgaaccctga
       61 cggcgcacgc cccgggtgtt gagcacgagc tctttcagtg ctgctaagta tggatcgagg
      121 tactcgaagc tgcgcacagg aatgcccgtg gcaatcagtg catcgctggc ttgatcgact
      181 ttcgtgcaat ggattcgatg gccgttcatc caagcgccta cgccttgcag ggccgtgaac
      241 atttcctcgc gattggggtc gtagacgacg cctacgatag gcaagtcatg ggtcagcggt
      301 tggcccatgg cgtcaggtgc cccggcatgg gccaccaagc caatagagac ggcgtaatgt
      361 tccatgccat gcaggtagtt ggtggtgccg tctaatggat cgacatacca ggtggcctga
      421 ctgccgagct cgccgccaga ctcttcgcca ataatgccaa gctcaggtgt ctcgctgcgc
      481 aaaatctcaa tgaccgcgga ctcagcttca cgatcggcct gggaaaccag gtcgttgcga
      541 ccttttctgt caatcaccag tttttctcgt gcgccacggt ggttttgcaa cacggcagcg
      601 cctgcgtgcg cggcacgtac ggcgacatct aaaaactcag catagggcaa catccgcaaa
      661 tctccatcag gctcggtgaa gcaaaaacgc caccattgag gtactgtact gcaaacgtct
      721 gacaaccatg tgtcctccat aaacatcctt cacataagcc cctgatgtcc aatacagaac
      781 aaccccgtct cgtgaacaaa gatcagtcgc cagccaagtg cgatgaagtc tgttctgaca
      841 tactcgttgt cggcggtggc atagcaggct cgaccgttgc tgcggtgttg gctcaatccg
      901 acttgcaggt aagcgtgatt gaccctatgc aaacgcacgg cacgcatttg gctgctgcgc
      961 tcacacccgt gatatcgagt gacaataatg cgcggtcccg attgtcgcgg ttgggggcag
     1021 cgttagctgg tcagtggtgg caacagtttg gctcagaagt ggtgtccaca gaagtggcat
     1081 caccctgtgg cgccatccag ttacagcgcc ccgagggtgc taagcgcgtt actgatctca
     1141 aagcccaggc acagacgttt gctcagcccg actgggcgcg ttgggtcgag cgtgatgagg
     1201 caagtgcgct tgctggatta ccgctgccgc gcggtggcat ttggtaccca gggggttggc
     1261 tcgtgcgagt gcccaaattg attaaggcca tgcaatcgat gccgggcgta acgctgcatc
     1321 ggtttgccgt tggccagctt cgtcgtgtcg caaccggctg gttagcactt gatgccagcg
     1381 gtgagccaat cgctcagggc aggcacgttg tcttggccaa cgcattcgat gtcttggggt
     1441 tacttgaacg ttcgggttta gaagatgtgt tggccggatg cgcgcgcttg ccggcgatgc
     1501 atcgcctggc tggtgaaatc acgttgctgc cagcgcaggc gctgtccggt ggtccgaagt
     1561 gcattgtggg tggcgatggt tatgtgctgc cttcagtaga cggttggtgt gtgtcgggcg
     1621 gcacctatgt gcgagacgct gatcaggccg gctgcaccga ggctgggcgc atggccaact
     1681 ggacaagggc gcagcagttg ctagatatca atgtcgatca gtcaaaaggg gttgagtcat
     1741 tacccggctg ggctggctgg cgggcagtgc tgccagggcg gttaccagcc attggcgcct
     1801 taccgggcgt tgtgggtttg tggaccacaa ccgcgggtgc ctcaaggggt ttgacatggt
     1861 cagtgttggg ggcaaacttg atacgcgatc agatcttggg gcgagaaaat gggctggagt
     1921 cggagcaggg gttcggtctg gatcaagcca tgcgtcaggc catttgtcct taattgacgt
     1981 taacttaaaa atttttttac ccacaaaata tttgcccttt gtctttgaaa agtaaccagt
     2041 ttctggtgca aatgaggagg cttggtgtgg tgaatttggt gggtatcgcc cggttttacc
     2101 c
//
LOCUS       DATBNL010000304         1886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_3407, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000304 DATBNL010000000
VERSION     DATBNL010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3407"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /gene="purU"
                     /locus_tag="VIC30_05110"
     CDS             complement(<1..739)
                     /gene="purU"
                     /locus_tag="VIC30_05110"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008864 - formyltetrahydrofolate
                     deformylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HEY7803796.1"
                     /translation="MTSVPNDYILTLSCPDRMGIVHRVSGLLLSHEGNIIDAQQFGDE
                     QTGRFFLRVHFALAAHASNSAIDEVRNDMAATAEAFDMQWQIHGAKDKAKLLILVSKQ
                     GHCLNDLLFRVHSGQLNAEVAAVVSNHRDFEPLVRSHGVAFHHLPVTTETKSEQEAQI
                     LELVEQLNIDLVVLARYMQILSGDLCRALAGRAINIHHSFLPSFKGAKPYYQAHARGV
                     KIIGATAHYVTPDLDEGPIIEQDIERVD"
     gene            complement(736..1878)
                     /locus_tag="VIC30_05115"
     CDS             complement(736..1878)
                     /locus_tag="VIC30_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY7803797.1"
                     /translation="MSKDVQCIVVGAGVVGLAIARELATCGVEVLVTDQAEGIGTGTS
                     SRNSEVIHAGIYYPAGSLKARLCLAGKHLLYEYCRARGVAYRQLGKLIVASDETEHDA
                     LKNILHKAQTNGVHDLQWLDAYQAQALEPALNCTAALLSPSTGIINSHGLMLAYQGDA
                     ENAGAQCVFHCPFESARALSDGGFEVSGFEVSFGGLEPMTLTCDMLINTAGLQAPALA
                     HRIDGLDASHIPAAYLCKGSYFNLQGKAPFDHLIYPVPQRAGLGVHLTLDLGGQAKFG
                     PDTQWVDREDYDIDPKRCEDFYEAVRRYWPDLKDGALQPGYTGIRPKISGPDEPAADF
                     CISGPSEHGLTGLVNLFGIESPGLTASMAIALEVKRILLNEPTPDS"
BASE COUNT          436 a          502 c          521 g          427 t
ORIGIN      
        1 tatcaacacg ttcgatgtct tgctcaatga tgggaccctc gtcaaggtct ggtgtcacgt
       61 aatgggcagt cgcaccaatg attttgacgc cgcgagcgtg cgcttggtaa taaggttttg
      121 cgcccttgaa gcttggcaag aagctgtgat gaatattgat cgcacgcccg gctaaggcac
      181 ggcaaagatc gcctgagagg atctgcatgt aacgtgccaa caccaccaga tcaatgttga
      241 gttgctcaac aagttcgagg atttgtgcct cttgttcgct tttcgtctcg gtggtgacgg
      301 gcaggtgatg aaacgccaca ccgtgcgagc gcaccagcgg ctcaaagtcg cgatgattcg
      361 acaccacagc ggctacttcg gcattgagtt gaccgctgtg cacgcgaaac agtagatcgt
      421 ttaagcaatg cccttgtttg ctgacaagaa tcagcaattt agccttgtct ttagcgccgt
      481 ggatttgcca ttgcatgtca aacgcctcgg ccgtggctgc catgtcgttt cgaacctcat
      541 caatggcact gttactggca tgggcggcca aggcgaaatg cacgcgcaga aagaaacgac
      601 ccgtttgctc atcaccaaac tgctgcgcat cgatgatgtt gccctcatga gagagcaaca
      661 aaccgctcac gcggtgaaca atgcccatgc ggtcagggca agacagcgtc agaatgtaat
      721 cgttcggaac agaggtcatg aatcaggtgt gggttcgtta agtaagatgc gtttgacttc
      781 aagggcgatg gccatggatg cggtcaagcc cggtgattct atgccaaaaa ggttaaccag
      841 acctgtcagg ccgtgctcac taggtcccga tatacaaaaa tcggctgctg gctcatcagg
      901 cccagaaatc ttgggacgaa tgccggtata gcccggttgc agagcgccgt ccttcagatc
      961 aggccaatat cgacgcacgg cctcatagaa gtcctcacaa cgtttgggat caatgtcgta
     1021 gtcttcacga tcaacccatt gtgtgtcggg gccaaacttg gcctggccac ctagatcgag
     1081 cgtcagatga acgccgagtc cggcacgttg cggtacagga tagatcaagt gatcaaatgg
     1141 cgctttgcct tgcaggttga aatagctgcc tttgcaaagg taagcggctg ggatgtgcga
     1201 tgcatccagc ccgtcaatgc ggtgagccag agcgggcgct tgcaagccgg cggtgttgat
     1261 caacatgtcg cacgtcaggg tcatcggttc tagaccaccg aacgacactt caaagccgga
     1321 cacttcaaag ccgccatcgg ataatgcccg agcggactca aacggacagt gaaacacgca
     1381 ctgcgcacca gcgttttctg cgtcaccttg ataggcgagc atcagaccgt ggctgttgat
     1441 gatgccggtt gacggggaca gtagggcagc agtgcagtta agcgccggct caagcgcttg
     1501 cgcttggtaa gcatctagcc attgcaggtc atggacccca tttgtctgcg ctttatgaag
     1561 gatgtttttt aaggcgtcgt gctctgtttc gtcgctcgcg acgatgagct tgcctaactg
     1621 tcggtatgct accccgcgcg cacgacagta ctcgtaaagc aagtgtttgc ctgctaggca
     1681 cagacgtgct tttaggctgc ctgctggata gtaaataccg gcgtgtataa cttcggagtt
     1741 gcgcgagctt gtgcccgtgc caatcccttc ggcctggtct gtcactaaaa cttcgacgcc
     1801 gcatgtggcc aactcacgcg cgatagccaa gccaaccaca ccagcgccaa cgacaataca
     1861 ctgcacatct ttactcatgg cgtttc
//
LOCUS       DATBNL010000305         2223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_163307, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000305 DATBNL010000000
VERSION     DATBNL010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163307"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1418
                     /locus_tag="VIC30_05120"
     CDS             198..1418
                     /locus_tag="VIC30_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY7803798.1"
                     /translation="MTTHAPIHAATHLNRIGQGRHFLQIPGPSNVPDRVLRAIDHPTI
                     DHRGPEFAALGLQILAAIKPVFGTTNPVIIYPGSGTGAWEAAMVNVLSPGDSVLMVET
                     GQFATQWKHLATKLQLQPEFIPGDWRTGVNAADIEARLSQDSQHQIKAVCVVHNETST
                     GVTSDIAAVRAAIDAAKHPALLMVDTISGLGSIEYKHDEWGVDVTIAGSQKGLMMPPG
                     LGFNAVSDKAIKASEHATMPNAYWRWDEIIEANKKGVWPTTPATNLLYGLAEVLDMLH
                     EEGLDHVYARHQRHAQATRLAVQAWALEVLCANPTQYSPVLTAVVMPKRDDGTHHDAD
                     AFRKLVLEKYNMSLGTGLNKLQGWVFRIGHLGHFNDLTLLGTLGGVEMGLANAGVPHK
                     RGGVQAAIDFLAKT"
     gene            complement(1467..>2223)
                     /locus_tag="VIC30_05125"
     CDS             complement(1467..>2223)
                     /locus_tag="VIC30_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEY7803799.1"
                     /translation="MDVTLEQAAHGLETEIRVPSWENCETCDGSGAKPGSSPTTCRTC
                     GGAGAVRMQQGFFSVQQTCPTCHGSGKEITDPCKACDGVGRVRKNKTLQVKIPAGIDD
                     GMRIRSGGNGEPGVNGGPPGDLFVEIHIKPHDIFQRDGDDLHCELTIPFTTAALGGDI
                     QVPTLSGKAEITIPDGTQSGKTFRLRGKGIKGVRAGYPGDLYCHVQVETPVKLTDEQK
                     DLLRQFEKSLGEGGHRHTPHSKSWTDRVKDFFS"
BASE COUNT          525 a          647 c          582 g          469 t
ORIGIN      
        1 ctaagtagac gcttgaatgc gacaaactca atcgggtgct cgtcaagggt gagcacccga
       61 tttttttgtg tgcggaacaa gttcgaggac cgaatgcgag ggacatgtgc aatgagcacg
      121 tgcaatgagc aaggtgacac aagcgcactt ctcgagtaca agaggtcttg tctgccgata
      181 ttgacctaca caccaccatg acaacacacg cccccattca cgctgcaacc cacttaaacc
      241 gtattggcca aggccgtcat ttcctgcaaa ttccgggacc gagtaacgtg cccgatcgcg
      301 ttctgcgcgc cattgatcac cctacgattg atcaccgcgg acccgagttt gccgcactgg
      361 gtttgcagat tttggctgct atcaaacccg tgtttggcac caccaatcca gtgatcatct
      421 atccgggttc aggcacgggc gcttgggaag cggccatggt caatgtgctc tcacccggag
      481 atagtgtgct catggtcgag acagggcaat tcgccacgca atggaaacac ctcgccacca
      541 aacttcagct gcagcccgaa ttcatccccg gtgactggcg cacgggcgtg aacgccgccg
      601 atatcgaggc gcggttaagc caagacagcc agcaccaaat caaagctgta tgcgtggtgc
      661 acaacgaaac atcaactggt gtgacatcgg acattgctgc ggtcagagcc gccatcgacg
      721 cagccaaaca ccctgcactc ttgatggttg acactatctc ggggcttggc agcattgaat
      781 acaaacacga tgaatggggc gtggatgtga ccattgctgg ctcacaaaaa ggcctgatga
      841 tgccgcctgg cttgggtttt aatgccgtga gtgacaaagc catcaaagcc agtgaacatg
      901 ccaccatgcc caatgcctac tggcgttggg acgagattat cgaggccaat aaaaaagggg
      961 tgtggcccac cacacctgca acgaacctct tgtatggctt ggccgaagtg ctcgacatgc
     1021 tgcatgagga agggttagat catgtctatg cccgccacca acgccacgcc caagccacgc
     1081 gtctggcggt tcaagcctgg gcgctagagg tgctgtgcgc caatcccacc caatacagtc
     1141 cggtgctcac cgcggttgtc atgcccaagc gtgatgatgg tacccaccac gatgccgacg
     1201 cattcagaaa actggtcctc gagaaataca acatgtcact gggcacaggc ctgaacaagc
     1261 tgcaaggctg ggtgttccgt atcggccacc tcggtcattt caatgacctg accttactcg
     1321 gcacccttgg cggtgtcgag atgggcctgg caaacgctgg tgtgccccac aagcgcggtg
     1381 gtgttcaggc tgccattgat ttcctggcaa agacctgaac agcactcacg cataccgcaa
     1441 cacccataca gaaccaatca atctcatcac gagaaaaagt ctttgacccg atcggtccag
     1501 gacttgctgt gcggggtgtg acgatggccg ccctcaccga gtgacttctc aaactggcgc
     1561 aacaagtcct tttgttcgtc ggtcaactta actggtgtct ctacttggac gtggcagtac
     1621 aagtcacccg ggtagccagc ccgaacacct ttaatgcctt tgccgcgcaa acggaaggtc
     1681 ttgccagatt gcgtgccatc gggaatggta atttccgctt taccactgag tgttggtacc
     1741 tgaatgtcgc caccaagagc ggcagtggta aacggtatcg tcaactcaca gtgcaagtca
     1801 tcaccatcgc gctggaagat gtcatgcggc ttgatgtgga tttcaacaaa gagatcacca
     1861 ggtgggccgc cgttgacacc aggctcaccg ttgccgcctg agcgaatccg catgccgtca
     1921 tcaatgccgg cggggatttt gacttgcagt gttttgtttt tacgcacgcg ccccacgcca
     1981 tcgcaagctt tgcaaggatc ggtgatttct ttgccagatc catgacacgt tgggcacgtc
     2041 tgctgcacac tgaaaaatcc ttgctgcata cgcaccgcac cagcaccacc gcaagttcga
     2101 caagtcgtag gtgaactgcc tggcttggca ccagaaccat cacacgtctc gcagttctcc
     2161 cagcttggaa cacgaatctc ggtctccaaa ccatgggctg cctgttccaa agtgacgtcc
     2221 atg
//
LOCUS       DATBNL010000306         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_153129, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000306 DATBNL010000000
VERSION     DATBNL010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153129"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VIC30_05130"
     CDS             <1..362
                     /locus_tag="VIC30_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY7803800.1"
                     /translation="IFGVELLPAVRQGATVLANFSNLGWFGDSWALRQHWQMARFRSM
                     ETRRPTLRATNTGITGAIDPSGRVIAELPVLAAGYVDVQVQGHTGLTPYTRWGNYPMW
                     ILVCLILLVAVVSRKRH"
     gene            434..1600
                     /locus_tag="VIC30_05135"
     CDS             434..1600
                     /locus_tag="VIC30_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005669563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7803801.1"
                     /translation="MSDALLVRSLGDITEIDAQTWDALNAQAGGSMLTSHRFLQAFEQ
                     SQSVCPDTGWQPQHLLIQDEASQAVVAAVPLYIKGHSYGEFVFDWAWADAYQRAGLRY
                     YPKWMSGVPFTPVTSARLLCTPEDQTLAAHALVKTVSATDLSSLHVLYTTEDEQQRLE
                     GAGCLTRHHTQFHWHNPGWSTFDEFLAQLTQPKRKKVRAERRKVAHAGVSTVVKTCDE
                     ITEADWDFFYRCYDNTYAERGNPPYLTREFFRLVDPQHCVMVLAHREARPIASSLLWL
                     DVLTDPVSGKQTKKLYGRYWGGLEHIDCLHFEVAYYTPIQWAIDNQIDIIEGGAQGEH
                     KMARGFTPVQTRSAHWLAHEGFTQAVADYLDREKRGLAAYNEALGSPFKTKPIA"
     gene            1693..1768
                     /locus_tag="VIC30_05140"
     tRNA            1693..1768
                     /locus_tag="VIC30_05140"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1726..1728,aa:Ala,seq:ggc)
BASE COUNT          422 a          510 c          487 g          408 t
ORIGIN      
        1 acatctttgg ggttgagttg ctgccagcgg tcagacaggg tgctacggtt ttagcgaatt
       61 tcagcaacct gggatggttt ggtgacagtt gggctttgcg gcagcactgg cagatggcac
      121 ggtttcgcag catggagacc cgtcgcccga cgctacgcgc caccaacact ggcatcaccg
      181 gtgccattga cccatcaggc cgggtgattg ccgaattacc cgtgctcgcg gctggctacg
      241 tagacgtgca ggttcaaggg cacacgggac tgacgccata cacgcgatgg gggaactacc
      301 ccatgtggat cctggtgtgc ctcatactgc tggttgcggt ggtcagtcgc aagcgacact
      361 gaaaccaccg caaaaaaaca caacaaccac actcaaccac actcaaccac actcaaccaa
      421 cgttgcccac ctcatgtctg acgctttgct ggtacgttct cttggtgaca ttaccgagat
      481 tgatgcacaa acatgggacg ccctgaatgc gcaagccggt ggctccatgc tgacctccca
      541 tcggttcttg caggcctttg agcagtcgca aagcgtgtgt ccagataccg gttggcagcc
      601 ccagcatcta ttgattcaag atgaggcttc gcaagccgtc gtggcagctg tcccgctcta
      661 catcaaaggc cactcttatg gtgagttcgt gtttgattgg gcatgggcag atgcgtatca
      721 gcgtgcgggt ctgcgttatt acccaaagtg gatgtcgggc gtgccgttta cgccggtgac
      781 atcggcgcgc ttgttatgca cgcccgagga ccaaacactg gccgcacatg cattggttaa
      841 aaccgtcagc gcaaccgatc tgtcatcgct acacgtgctc tacaccaccg aagatgaaca
      901 gcaacgcttg gaaggcgcgg gctgcctgac acgtcaccac acccagtttc actggcacaa
      961 cccgggctgg tcgacatttg acgagttctt agcgcaactg acccagccca aacgcaagaa
     1021 agttcgggct gaacggcgca aggtagcgca cgctggtgtc agcaccgttg ttaaaacatg
     1081 cgatgaaatt accgaggccg attgggattt tttctatcgt tgttatgaca acacctatgc
     1141 tgaacgcggc aatccaccct atctgactcg agagttcttc cgactcgttg acccgcaaca
     1201 ctgtgtcatg gtgttagctc accgagaggc cagacccatc gcatcctcgc tgctgtggct
     1261 agatgtgctc actgatcctg tcagtggcaa gcaaaccaaa aagctctatg gacgctattg
     1321 gggtggtctc gaacacatcg actgcctgca tttcgaggtg gcgtactaca cgcccattca
     1381 gtgggccatc gacaatcaga tcgatatcat tgaaggtggt gcacagggtg aacacaaaat
     1441 ggcgcgcgga ttcacaccgg tgcaaacccg atcggcacac tggctggcac acgaggggtt
     1501 cactcaagca gtagccgatt accttgaccg agaaaaacgt gggttagccg cgtacaatga
     1561 ggcgctgggt tcgcctttta agacaaagcc cattgcctaa aacgcctgat gtacgattta
     1621 cagtgccccg aatgccagtt caatttgcca agaactaaag tttcatgcat aatcttgttc
     1681 ttcgcagatt ctgggggtat agctcagctg ggagagcgct tgcatggcat gcaagaggtc
     1741 agcggttcga tcccgcttat ctccaccagt taattcgata cttagcgctg tatcgttaca
     1801 gaaattctct aggtccccat cgtctag
//
LOCUS       DATBNL010000307         2072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_133278, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000307 DATBNL010000000
VERSION     DATBNL010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133278"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..119
                     /locus_tag="VIC30_05145"
     CDS             <1..119
                     /locus_tag="VIC30_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEY7803802.1"
                     /translation="PKKLMPRMQHLLQRSDLTQDEVDMLRGMCTAMMKSTQS"
     gene            189..1115
                     /gene="cysE"
                     /locus_tag="VIC30_05150"
     CDS             189..1115
                     /gene="cysE"
                     /locus_tag="VIC30_05150"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013435662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEY7803803.1"
                     /translation="MFSRMKEDISCILDRDPAARSRLEIVTCYPGLHAIWVHRMAHRL
                     WVSRWHWLARLVSHLGRVFTGIEIHPGATFGQRVFIDHGHGVVIGETAVVGDDCTIYQ
                     GVTLGGTRLYKGEKRHPTLGTGVVVGAGAKVLGGFKVGDGARIGSNAVVVKPVPAGAT
                     AVGNPARVILPQADTDRSHTAKPSAAPTSQAQATADCDRGSLDTKPLQDMLAAQASRP
                     EQRSNESNESTDSSDSNEQKLGDGDGFSAYGVNLGDTDPLVRVLHELIDHTAKQDARI
                     SQLCRTIESMGKRVNGAPDDELDAERLNKLVD"
     gene            complement(1152..1790)
                     /locus_tag="VIC30_05155"
     CDS             complement(1152..1790)
                     /locus_tag="VIC30_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEY7803804.1"
                     /translation="MQRLTRDQIAERLAKDIAEGAYVNLGIGLPTKVANYLPKDKEIF
                     LHSENGVLGMGPAPKEGQEDWDLINAGKQPVTLLPGGSFFHHADSFAMMRGGHLDICV
                     LGAFQVSRHGDLANWHTGEPDAIPAVGGAMDLAAGARAVYVMMELLTRDGQSKLVDQC
                     TYPLTGLKCVSRIYTDYAVFQIEGNGVVRVVDDCSGAGSEELKRLTGLDLAF"
     gene            complement(1800..>2072)
                     /locus_tag="VIC30_05160"
     CDS             complement(1800..>2072)
                     /locus_tag="VIC30_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEY7803805.1"
                     /translation="QGKEVRTIDGEDYLFEAPIKADVAFIKAKSGDRWGNLTYNKTAR
                     NFGPVHATAAGLTVAQVDTVVELGELDPEAVVTPGIFVQRVVQVQS"
BASE COUNT          488 a          598 c          564 g          422 t
ORIGIN      
        1 atcctaaaaa gctcatgcca cgcatgcaac acctactgca acgcagcgac ttaacgcaag
       61 atgaggtcga tatgttgcgt ggcatgtgta cggccatgat gaaatcgaca cagtcgtaac
      121 cacttaaagc agcaaccaca gcatggactc agcttaccga ggggtctgca ttcagttacg
      181 atgcgcacat gtttagtcga atgaaagaag acatcagctg cattttggat cgcgacccag
      241 cggcacgcag ccgcttggag atcgtgacct gctatccagg cctgcacgcc atttgggtgc
      301 accgcatggc ccatcgtctg tgggttagcc gctggcattg gttagcgcgc ctagtgtcac
      361 atctgggacg cgtatttacc ggcatcgaga ttcacccggg ggcgacgttt gggcagcgcg
      421 tgtttattga ccatggtcac ggtgtggtga ttggggaaac tgccgtggtg ggcgatgatt
      481 gcaccattta ccagggtgtc actctgggcg gcactcggct ctataaagga gaaaaacgcc
      541 atcccacgct cggtactggc gtggtggtgg gcgctggcgc caaggtgctg ggggggttta
      601 aggtgggcga tggcgcgcga atcggctcca atgccgtggt cgtcaaaccc gtgccagccg
      661 gcgctaccgc cgttggtaac cctgcccgcg tgattctgcc ccaagccgat acagacaggt
      721 cacacacggc caagccgagc gcagcgccaa catcgcaagc tcaggcaacg gcagattgcg
      781 accgaggcag cctagatacc aaacccttac aagacatgct ggccgctcag gcgagccgtc
      841 ctgagcagcg tagcaatgaa agcaatgaaa gcactgatag cagtgatagc aatgaacaga
      901 agctcgggga cggcgacggc tttagtgcct atggcgtgaa cctaggtgac accgacccgt
      961 tggtgcgtgt cttgcacgag ctcattgatc acaccgccaa gcaagacgcg cggatatcac
     1021 agctgtgccg caccatcgag tccatgggca agcgcgtcaa cggtgcgcca gacgatgaac
     1081 tcgatgccga gcgactcaat aagctcgtgg attgacgtgg gctagacaat ctcgcgaact
     1141 gaataagcca attaaaacgc tagatcgaga cctgttagac gtttgagctc ttcagaacca
     1201 gcgcctgagc agtcatcaac cacacgcacc accccgttgc cttcgatttg aaacacggca
     1261 tagtctgtgt agatgcgtga gacacacttc aaaccggtca atggatacgt gcactgatcg
     1321 accagtttgg attgaccgtc acgcgtcaat aactccatca tcacgtaaac cgcacgcgca
     1381 ccagcagcca gatccatggc gccaccgacc gccggaatcg catccggctc gccagtgtgc
     1441 cagttggcca gatccccgtg gcgcgatact tgaaacgccc ccaacacaca gatatccaga
     1501 tgaccaccac gcatcatggc aaatgaatcg gcatgatgga aaaagctgcc gcctggtaac
     1561 aaagtcacag gctgtttgcc ggcattaatc agatcccaat cttcctggcc ttctttcgga
     1621 gcaggtccca tgccaagcac gccattctcg ctatgcaaaa agatttcttt gtctttgggc
     1681 aggtaattgg ccactttggt gggcagacca atgcccaaat tgacgtaagc gccctcggca
     1741 atgtccttgg ccagtcgctc ggcgatttga tctcgggtta aacgttgcat atcgatctcc
     1801 tacgactgaa cctgaaccac gcgttgcaca aaaatcccgg gcgtgaccac cgcctcaggg
     1861 tcaagctcgc caagttcgac aacggtgtcg acttgcgcga cagtcaatcc ggcggcggtg
     1921 gcatgcactg gcccgaaatt gcgtgcggtc ttgttatacg tcagattccc ccaacgatca
     1981 ccagacttgg ctttgataaa tgccacgtcc gctttgattg gcgcctcaaa caagtagtct
     2041 tcgccgtcta tggtgcgcac ctctttgcct tg
//
LOCUS       DATBNL010000308         2571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_23404, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000308 DATBNL010000000
VERSION     DATBNL010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23404"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..1461)
                     /locus_tag="VIC30_05165"
     CDS             complement(220..1461)
                     /locus_tag="VIC30_05165"
                     /inference="COORDINATES: protein motif:HMM:NF019421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HEY7803806.1"
                     /translation="MTETVSSLSVLLHGETIGTLTHLGHDKTTFSFADSYVNNPSRPI
                     LSLSFLDVSGEVMIRPKVTQTKLLPFFSNLLPENALRDYLASRAGVNPVREFFLLRAL
                     GSDLPGAIRVEPSDGQVLPSADGKSEGDQDGQRPMRFSLAGVQLKFSAVQRARCGLTI
                     PATGEGGSWIVKLPSQRFDALPENEYAMMELARKIGIDVPETRLMPIDQIQGIPQTLQ
                     NMGSPLKRGEHAFVIRRFDRGVGQHEGHPIHIEDFAQVFGVYPNDKYRKASMRNIAQV
                     LKQEASQDDQIEFIRRLVFSALIGNADMHLKNWSLIYRDRHRASLSPAYDFVSTIAYL
                     PDDSAALTVSRSKKFSDFTLDELQHLAVKAKLAQDLVIDTAKQTVQAFDEIWSQEKAH
                     LPLTSSMVEAIDQHRARVPLS"
     gene            complement(1454..1780)
                     /locus_tag="VIC30_05170"
     CDS             complement(1454..1780)
                     /locus_tag="VIC30_05170"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7803807.1"
                     /translation="MPLLTEDFVERLKTARKKKRLSQRKLGARFGVPQSHISKIESGN
                     VDLRLSTLVEYARILDLELFLVPSASVLAVETMIRVTESNRNVDELTLPAYRLDDDDI
                     EGDTDD"
     gene            2180..2551
                     /locus_tag="VIC30_05175"
     CDS             2180..2551
                     /locus_tag="VIC30_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803808.1"
                     /translation="MRHLFCIDSITEITPTMANGVIVSGSHGGVSSASYVVNALHKPF
                     AVFFNDAGVGKDQAGIEALKILDELHILAFAYGHNSARIGQAADGLQNGIVTHVNQTA
                     NSFAATIGGPVHDLVVRLRDM"
BASE COUNT          640 a          705 c          606 g          620 t
ORIGIN      
        1 agatcctgcg ccgggtgccc gagctcagtt tcctcaagta gaccgcttgt tcggtcgcgt
       61 caatacgttc aatgatccag tccatggcga gcatcttagc gacaaacgca ggccgcgacg
      121 gagaccctgt gtgcgcgccc cctacttggc aagccctagg tcttgtaggt ctggtagcca
      181 acctgcaagg tcgtcgacgc tcgaatggct ccacactgcc tagctcaagg gcacacgagc
      241 ccgatgttga tcgatcgctt caaccatcga ggaagtcagc ggcaaatggg ctttttcttg
      301 ggaccaaatt tcatcgaatg cctgcacagt ttgcttggct gtatcaatca ccaagtcttg
      361 cgccaacttg gccttaacag ctaggtgctg tagttcatct aacgtgaaat cactaaactt
      421 cttgctgcgg cttaccgtca atgctgcgct atcgtcgggc agataagcaa tggtcgagac
      481 aaaatcatag gccggcgaca gtgacgccct atgcctgtcc cggtatatca gtgaccagtt
      541 ctttaagtgc atgtccgcgt tgccaatcag cgcactgaaa accagccgac gaatgaactc
      601 tatttggtcg tcctgactgg cctcttgctt gagcacttgc gcgatattgc gcatgcttgc
      661 ttttctgtac ttgtcgttcg ggtaaacacc aaaaacctga gcaaaatcct caatgtgtat
      721 agggtgcccc tcgtgttgac caacgccacg atcaaaacgc ctgatgacaa atgcatgctc
      781 gccgcgtttt aacgggctgc ccatattctg tagggtctgt ggaatccctt gaatctgatc
      841 aatgggcatc agacgcgttt cggggacatc aattcctatc ttgcgcgcca gttccatcat
      901 ggcgtattca ttttccggca gcgcatcaaa acgttgcgat ggcaacttca caatccatga
      961 acctccctca ccagttgctg ggatggttaa cccgcaacgc gcccgctgca ctgcagagaa
     1021 tttgagttgt acgcccgcca gagaaaagcg catcggccgc tgaccgtctt gatcaccctc
     1081 tgacttgcca tctgcagaag gcaagacctg accatcagac ggttcaaccc ggatcgcacc
     1141 tggcaaatct gaccctagtg ccctcaacaa aaaaaactcg cgaaccggat tcacgccagc
     1201 gcgactggct aggtaatccc ttaatgcatt ttcaggcaaa aggttcgaga aaaaaggaag
     1261 cagtttggtc tgcgtcacct taggacgtat cattacctca ccagacacat ccagaaaact
     1321 caggctcaaa atcgggcgag atggattgtt gacataagaa tccgcaaaag aaaacgtggt
     1381 cttatcgtga cccaaatggg tcagcgtgcc aatcgtttcg ccatgaagca acacactcaa
     1441 agaggacacg gtctcagtca tcggtatcac cttcgatatc atcatcatct aagcggtagg
     1501 ctggcaacgt gagctcatcg acgttacggt tgctttctgt gacgcgaatc atcgtctcaa
     1561 cggctaatac cgatgcactc ggaacgagaa acagctcaag atcgagtatg cgcgcatact
     1621 ccactagcgt cgacaaccgc aagtcgacat tgcctgactc gatttttgag atgtggctct
     1681 gaggcacacc aaagcgtgca ccgagctttc tttggctaag gcgcttcttt tttcgagccg
     1741 tttttaaacg ctccacaaag tcttcagtta gtagaggcat ggcacttaaa gttttgttgg
     1801 atatggttta tttgatgcgc ttgatgtgat atgttttatt atatcaataa tttactttga
     1861 tacactttaa catatcattt attcaatcac ctttcaatca cggcgcttct ttcggaagtt
     1921 gtccgaattt catgccgcgc gttttaaatc cgcttgttct agtacctaac gccagaaaac
     1981 tgccacttac aactgccact gacggctgcc gctgacaact gccctctatc aacagcgtag
     2041 ctggctagac tggatataga cgcaccgaac cgcacctatg ggctataacg gtcggcatgt
     2101 gactcgcata ccagcgcacc agatacagca ccagatacag caccagatac agcaccagat
     2161 acagcaccaa ataccgccaa tgagacatct tttttgtatc gactccatca ctgaaatcac
     2221 ccccaccatg gccaatggcg tgattgtctc tggctcgcac ggcggcgtgt cgtcggcaag
     2281 ctacgtggtt aacgctctgc acaagccatt tgcggtgttc tttaacgacg ccggtgtagg
     2341 caaagaccaa gcgggtatcg aagcattaaa gatactggac gaactgcaca ttctggcctt
     2401 tgcctatgga cataacagtg cacgtatcgg gcaggctgcc gatgggctgc agaacggcat
     2461 cgtcacccat gtcaaccaaa ccgcaaacag cttcgctgcc accattggtg gcccagtgca
     2521 cgatctggtg gtacggctgc gggatatgtg agtcgttgtg ctaaaaaatc a
//
LOCUS       DATBNL010000309         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_23437, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000309 DATBNL010000000
VERSION     DATBNL010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23437"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="VIC30_05180"
     CDS             <1..1426
                     /locus_tag="VIC30_05180"
                     /inference="COORDINATES: protein motif:HMM:NF023657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HEY7803809.1"
                     /translation="NLYDGYYEGKTPGQNKMARVFDSTAINSTQRFANRIQSALFPPY
                     RAWCELTPGNDIPKERQPEIREALEVYTSRMFDVVRQTNFDLAISEFLLDLCVGTAVM
                     LVQPGDDDAPVRFTPVPQYLVSLEEGPYGTVDNVYRRLRIRGEAITRQWPDANIPERL
                     QEMIDQKPDQEIDLIEATVYNLDEDIYCYHLVWPKDKSELVYRTMNISPWIVARFMKV
                     PGEVYGRGPLVTALPDIKTLNKVKELVLKNASLAVAGVYTAADDGVLNPQTIKITPGA
                     IIPVARNGGPQGESLRPLRSATDFNTSQLVINDLVTSIKRMLYDDSLPPDTMSARSAT
                     EIVQRMKELSQNLGSAYGRLITEAMTPLVRRILYVMDEMNIIDLPLEVNGLQVKIVPN
                     APLAQAQNMDELEKVLQFGQVAQQFGMLGQVAVNQEEMLDYIAVKMGVPQSLLNTAEQ
                     REIIMQQMQQQQQAAMQPPEAPAV"
     gene            1436..1699
                     /locus_tag="VIC30_05185"
     CDS             1436..1699
                     /locus_tag="VIC30_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803810.1"
                     /translation="MEGWDGLREAENMHLRDQAISQDDIDIAYVRCFSTEAGQEVIAH
                     LKAMTLDQPSWYPGEDPSHGFAREGQNSVVREMLRRIERGRNL"
BASE COUNT          490 a          454 c          507 g          392 t
ORIGIN      
        1 caatttgtat gacggatact acgaaggcaa aacgcctggt caaaacaaaa tggcgcgggt
       61 gttcgactcg actgcgatca actcgacgca gcgttttgcg aaccgtattc agtctgcact
      121 gttccctccg tatcgcgcat ggtgtgagct gactccaggc aatgacattc ctaaagagcg
      181 tcagcctgag atccgcgagg cgctcgaggt gtacacaagt cgcatgtttg acgtagtgcg
      241 ccagacaaat tttgacctgg caatatctga gttcctgctc gatctgtgcg tcggcacagc
      301 ggtcatgctc gtgcagcctg gcgatgatga tgcgcctgtt cggtttacgc cggtgccaca
      361 atacctggtc tcactcgagg aaggtccata cggcacagtc gataacgtct atcgtcggct
      421 gcgtatccgc ggtgaagcaa tcacgcgcca gtggcctgat gcgaatatcc cagagcgttt
      481 gcaggaaatg atcgaccaga agccagatca ggaaatcgat ctgatcgagg cgacggtgta
      541 taacctggac gaagacatct actgctatca cctggtctgg ccgaaagata agtcggagct
      601 cgtgtatcgc acaatgaata tctcgccctg gatcgtcgca cgattcatga aggtgccagg
      661 cgaagtctat ggccgcgggc cattggtcac cgcactgcca gacatcaaaa cgttaaacaa
      721 ggtcaaagaa ttggtcttga aaaatgcgtc acttgcagta gccggtgtat acacggctgc
      781 tgatgacggc gtgctgaacc cacagacaat caagattact ccaggggcga ttatccctgt
      841 ggcgcgcaat ggcgggccgc aaggcgaatc gctgcgccca ttgcgttcag caactgattt
      901 taatacatcc cagttggtca ttaatgattt ggtgacctca atcaagcgga tgctttacga
      961 cgattcactg ccgcctgaca cgatgtctgc tcgatcagca actgagatcg tgcagcgcat
     1021 gaaagagctg tctcaaaacc taggctcggc atatggccga ctcattactg aggcgatgac
     1081 gcctctagtg cgtcgaatct tgtacgtcat ggatgaaatg aacattatcg atttgccgct
     1141 tgaggtgaat ggattacaag tgaagattgt gcctaatgct ccattggcac aagcacagaa
     1201 catggatgag cttgagaagg tcctacagtt tggccaggtt gcccagcagt tcggcatgct
     1261 cggtcaggtt gcagtgaatc aagaagaaat gctcgactac attgcggtga agatgggcgt
     1321 accacaatct ttgctcaata cagcagagca gcgtgaaatc atcatgcagc aaatgcagca
     1381 acaacaacag gcggcgatgc aaccaccgga agcaccagcc gtttaggagt gagacatgga
     1441 aggatgggac ggtctgagag aggccgaaaa catgcacctg cgagaccaag ctatttcgca
     1501 ggatgatatc gatattgcct atgtgcgctg cttttccaca gaagcaggtc aagaagtgat
     1561 cgctcaccta aaagcaatga cattggatca gccgtcctgg tatccaggcg aagatccaag
     1621 tcacggcttt gcgcgtgaag gtcaaaatag tgtggtgcgc gagatgctgc gccgaatcga
     1681 aagaggaaga aacctatgag tgaagatatg agtgttgctg agaacacaga gtcaacgacc
     1741 gaagaatccg ggtcgctgct ttcaccaagt gtcggcgagc aagaaacccc gcaaagccca
     1801 gaagaaatgt cggtgcctca cctggaaagt gagcaagaag gcc
//
LOCUS       DATBNL010000310         1589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_153191, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000310 DATBNL010000000
VERSION     DATBNL010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153191"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1390
                     /gene="xseA"
                     /locus_tag="VIC30_05190"
     CDS             74..1390
                     /gene="xseA"
                     /locus_tag="VIC30_05190"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006220285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEY7803811.1"
                     /translation="MTVESTFTNHGAEPSFYTVSELNEAVTELLAHEFGPVWLRGEVS
                     SFTRAASGHFYLSLKDERAVVRAVMFRGRQAHCAFTPAVGDKVEVQARLGLYEPRGEF
                     QVNIEVLRRAGRGSLHEQFELLKSKLQAEGLFDLAGKRPIERLPRAIGVITSLGAAAL
                     HDVLTTLARRAPQVPVIVYPCLVQGQSAPLALRQALAKANGRQEVDTLLLVRGGGSIE
                     DLWAFNDENLARDIASSAIPVIAGVGHESDTTIADFVADLRAPTPTAAAELCCVARGD
                     MIAMLMNQTAALHQRMRRKLEQGAQRLDRLSLKLVAPSQRIAAKQHRVAMLAQRLRHA
                     SPDIAALQQRNQQGAIRLARAATQALTARVHRLEHLNATLGGLSPTAPLERGFALVRD
                     SKGQIVTRAESLHPQDELMIAFASGQAVAQVQSVNPATQTRVDKKD"
     gene            1488..>1589
                     /locus_tag="VIC30_05195"
     CDS             1488..>1589
                     /locus_tag="VIC30_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="SodB; iron binding; present under aerobic and
                     anaerobic conditions; destroys free radicals; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HEY7803812.1"
                     /translation="MTHTLAPLPYEMDALAPHISKETLEYHYGKHHQT"
BASE COUNT          341 a          433 c          477 g          338 t
ORIGIN      
        1 atccgcgacg cgctgcagcc actggcggcc gtgcggggca ggagcgtggc caccttctac
       61 ggcagcaacc cttatgacag ttgaaagtac gttcacaaat catggcgctg agccctcgtt
      121 ctacacagtc agtgaactaa acgaagcggt gactgagttg cttgcccacg agttcggtcc
      181 agtctggctg cgtggcgagg tctctagttt tactcgggcg gcgtccggtc atttttacct
      241 gtcgctcaaa gatgaacgcg cggtggtgcg tgccgtgatg tttcgaggcc gacaggccca
      301 ttgtgctttt acccccgctg tgggcgacaa ggtcgaagtc caagctcggt tgggcctgta
      361 cgagccacgc ggtgagtttc aggtcaacat cgaggtccta agaagggcgg gtcgcgggtc
      421 actgcatgag cagtttgagt tgctgaaatc aaaattacaa gctgagggtt tgtttgatct
      481 ggctggcaag cgacccattg aacgtctgcc acgagccatt ggagtgatta cttcattggg
      541 ggcagccgcc ttgcacgatg tattgactac gctggcacgt cgcgcacctc aggtaccagt
      601 gattgtttat ccttgcttgg tccaaggcca aagcgcgcct ttggcgctcc ggcaggcact
      661 ggccaaagcc aatgggcgac aggaagtcga taccttgctg ttggtcagag gcgggggcag
      721 catcgaagac ctgtgggcgt ttaacgacga gaatttggca cgggacatcg cctcaagtgc
      781 catcccggtg attgccggtg tggggcatga gtctgatacg acgattgccg attttgtggc
      841 agatttacgt gcgccaacgc ccacagcggc tgcagaattg tgctgcgtgg ccagaggcga
      901 catgattgcg atgctgatga accagacggc tgcattgcac cagcgcatgc gaagaaagct
      961 ggagcaaggt gctcagcgcc ttgaccgcct gtcattaaaa ctcgtggcgc cttctcagcg
     1021 tattgcggct aagcagcatc gggtcgctat gttggcgcaa cgtctgcgcc atgccagtcc
     1081 tgatattgca gcgctacagc agcgcaacca gcaaggcgcg atcaggcttg cgcgagcggc
     1141 gacacaagcc ctcacggcgc gcgtgcatcg tttagagcac cttaatgcta cgcttggtgg
     1201 gctctcgccc acggcaccac ttgagcgcgg gtttgcactg gtgcgtgata gcaaagggca
     1261 gatcgtgacg cgcgccgagt cgttacatcc ccaagatgag ttgatgatcg cctttgccag
     1321 tggtcaggcg gtcgcacaag tgcaatcggt gaacccagca acccaaaccc gcgttgataa
     1381 aaaggattga tgcccgtggt cacggcgggt ggatacaata cgtggcgttg ggtgtaagct
     1441 tcacccgatc atgattccaa tgactcagaa aaaaggatac cgcttccatg acacataccc
     1501 ttgcaccgtt gccttacgag atggacgcgc tggcacctca catctcaaag gaaacgcttg
     1561 agtatcacta cggcaaacat caccagacc
//
LOCUS       DATBNL010000311         2700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_103359, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000311 DATBNL010000000
VERSION     DATBNL010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103359"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VIC30_05200"
     CDS             complement(<1..557)
                     /locus_tag="VIC30_05200"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEY7803813.1"
                     /translation="MSQIQELPFAAIQFYSTASYHCSYLPDEQARSQVAAPGHLIHAD
                     NYTELVQQGFRRSGVFTYRPHCDHCKACIPVRVDCAAFTPNRSQRRAAKAHRDLRAHI
                     MALGWSAEHFELYSRYQSARHPGGGMDEDSQAQYRQFLLASRVNSRLVEFRDGHGKLF
                     MVSIIDILEHGLSSVYTFYDPDQAG"
     gene            complement(563..1354)
                     /gene="aat"
                     /locus_tag="VIC30_05205"
     CDS             complement(563..1354)
                     /gene="aat"
                     /locus_tag="VIC30_05205"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEY7803814.1"
                     /translation="MPGPLIWVKPDEPLPRAGQALLNPPGLVAAGLDLSVPRLTEAYR
                     KGLFPWFSDGDPVLWWSPDPRMVLVPDELHISKSLGKQLRQIARQQQNGDYGVIVTTN
                     QAFDAVMHGCAARGEHGQDTWITVEMKQAYQQWHAAGAVHSVETWMNGQLVGGLYGVC
                     LGRMFFGESMFTRATNASKIALVHLVRFLQRQGVTMIDCQMQTEHLASLGARSIAREI
                     FIDHVSVATDSPPIDWSRGWIDAEGDFRPNLPEETKRKPMRFMYD"
     gene            complement(1361..1948)
                     /locus_tag="VIC30_05210"
     CDS             complement(1361..1948)
                     /locus_tag="VIC30_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY7803815.1"
                     /translation="MDKHPDSPDFFFPAPRRSNFCSQCATPITRRTPPGDNRERDLCE
                     HCGAVHYQNPRMVVGTLPVWDNKVLLCLRAIEPRANTWTLPAGFMELAETTGQGALRE
                     TREEAGVEVELGSLYTVIDVSTVDQIHVYFLAHAANGDVDPGPESLDARYFALDDIPW
                     DNLAFRSVSTTLKHYISDLQRGQFETRYYTLPPAY"
     gene            complement(1964..2572)
                     /locus_tag="VIC30_05215"
     CDS             complement(1964..2572)
                     /locus_tag="VIC30_05215"
                     /inference="COORDINATES: protein motif:HMM:NF022609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 family protein"
                     /protein_id="HEY7803816.1"
                     /translation="MDPSVIQAIERWPNVPAVFGWLSLTARGQWRLHPDGKAHEGSTG
                     ESISNPQILAFINRNYASDELGRWYFQNGPQRVYVRLDAAPWILFADDAQRQFNTHTG
                     SVAANVDRVWLDEQGQIYLQTELGPGMIVDRDLPRFLAGAKTQTALTLEDWWAQGLST
                     TTSLTGLDQHWPACVNPLPVRRLDAATPIDTQLKFVANPRPA"
BASE COUNT          553 a          723 c          832 g          592 t
ORIGIN      
        1 ctgcctgcct gatcagggtc gtagaaggta tacaccgatg acagtccatg ttccaggatg
       61 tcgataatcg acaccataaa gagcttgcca tgtccgtcac gaaactccac cagacgagag
      121 ttgactcggc tggccagtaa aaactggcga tattgcgctt ggctgtcttc atccatgccg
      181 ccaccgggat gacgcgcgct ttgataacga ctgtagagct caaagtgctc ggccgaccag
      241 ccaagcgcca tgatatgggc acgcagatcg cgatgtgctt tggcggcacg gcgctggctg
      301 cggttgggtg tgaaggcggc gcaatcaacg cgcaccggaa tgcacgcctt gcagtgatcg
      361 cagtgcggtc ggtaggtaaa gacaccactg cgccgaaacc cctgttgcac cagctcggtg
      421 tagttgtcgg cgtgaattaa atgtccaggt gcggccactt gcgagcgcgc ctgctcatcg
      481 ggcaggtagc tgcaatggta gctcgcggtg ctatagaact ggatggccgc aaagggcagt
      541 tcctgtatct ggctcatggg aatcaatcgt acatgaaacg catcggtttg cgcttagttt
      601 cctcaggcag attagggcgg aaatcgcctt cggcgtctat ccatccccta gaccagtcaa
      661 ttgggggtga gtcagtagcg acgctcacgt ggtcgataaa gatctcgcgc gcgatgctgc
      721 gtgcaccaag cgaggccaag tgttcggtct gcatctggca gtcgatcatg gtgacacctt
      781 gtcgttgcag aaaacgcacc agatgaacca aggcgatttt agaggcgttg gtggcgcggg
      841 tgaacatcga ctccccaaaa aacatcctgc ctagacaaac accatacaac ccgccgacaa
      901 gttggccgtt catccaggtc tccacgctgt gcacagcacc tgcggcatgc cattgttgat
      961 aggcttgttt catctcgacg gtgatccacg tgtcttggcc gtgttcaccg cgcgcagcac
     1021 aaccgtgcat gaccgcatca aatgcctgat tggtggtgac gattacaccg taatcaccgt
     1081 tttgttgctg acgggcgatc tgtcgcagtt gtttgcccag tgatttgctg atgtgaagct
     1141 cgtcgggcac aagtaccatg cgtgggtccg ggctccacca taggacgggg tcgccgtcac
     1201 taaaccaggg aaagagccct ttgcggtagg cctcggtcag ccttggcacg ctcaagtcca
     1261 ggccagcggc caccagtcca gggggattta gcagggcttg gccagcacgt ggcagtggtt
     1321 catcgggttt aacccagatc agtgggccgg gcatgttgcg ttaataggcc ggtggcaggg
     1381 tgtagtaacg cgtctcgaat tgtccgcgtt gcaagtcgct gatgtagtgt ttcagtgtcg
     1441 tggacactga acgaaacgcc agattgtccc aagggatgtc atcaagcgca aagtaacgcg
     1501 cgtcaaggct ctcggggccg gggtcaacgt cgccgttggc cgcatgcgcc agaaagtaca
     1561 catggatttg atcaacggtt gatacgtcaa tcacggtgta gagcgaaccg agttcgactt
     1621 cgacaccggc ttcttcgcgt gtctcgcgca aagcgccctg accggtggtc tcagccagct
     1681 ccatgaaccc agcaggcagc gtccatgtgt tggcgcgtgg ctcgatggct cgcaggcaca
     1741 gcagcacctt gttgtcccag accggtaagg tgccgaccac catgcgcggg ttctggtagt
     1801 gcacagcacc acagtgttca cacaggtcgc gctcacggtt gtcacctggt ggcgtgcggc
     1861 gtgtgatggg tgtggcgcac tggctgcaga agttgctgcg tctaggtgcc gggaaaaaga
     1921 aatcagggga gtcggggtgt ttgtccatcc cggtattcta gccttaggct ggccgcggat
     1981 tagccacaaa ctttagttgg gtatcgattg gggtggcggc atctagccgt cgcaccggca
     2041 gggggttgac gcaggctggc caatgttggt ccaggcctgt tagcgaagtc gtggttgaaa
     2101 gcccttgcgc ccaccagtct tcaagggtga gggcggtctg ggtcttggcc ccagccagaa
     2161 agcgcggcag atcgcgatca acgatcatgc cgggccccag ttccgtttgt aaatagatct
     2221 gaccctgctc atctagccag acgcgatcga cgttggccgc gactgaacct gtgtgcgtat
     2281 tgaattggcg ttgtgcatcg tcggcaaaca agatccaggg cgcggcgtca aggcgcacgt
     2341 agacgcgctg gggcccattc tgaaagtacc aacgcccaag ttcatcactg gcgtaattgc
     2401 gattgataaa agccaagatc tgggggttac tgattgactc acccgtactg ccctcatgtg
     2461 ccttgccatc tgggtgcaag cgccattgac cgcgtgctgt gagcgacagc cagccaaaga
     2521 ccgctggcac gttgggccag cgttcaatgg cttggatgac agatgggtcc atggtttgct
     2581 atttctgcgg gctgttgggt tcaggaaaat caggcgctgg tgctttctcg tctttgccac
     2641 tgctgacgat agtttgggcg tcaagttttt gagagagagc agagcctgtc ggtggatagt
//
LOCUS       DATBNL010000312         9255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_153234, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000312 DATBNL010000000
VERSION     DATBNL010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 9255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9255
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153234"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1377
                     /gene="paaN"
                     /locus_tag="VIC30_05220"
     CDS             <1..1377
                     /gene="paaN"
                     /locus_tag="VIC30_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018715831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation protein PaaN"
                     /protein_id="HEY7803817.1"
                     /translation="AAMPGWQAIGAEGRTGICLEILHRLNQQSFEIGHAVMMTSGQGW
                     MMAFQAGGPHAQDRALEAVTYAWREQSFVPSQALWEKPQGKNPPIEMRKHFEIVGRGV
                     GLVIGCGTFPTWNTYPGLFATLATGNGVIVKPHSNSVLPAAITVKTIRDVLSEYGIDP
                     NLVSLCVAPDRSVTQKLTTHPDIKSVDFTGGNAFGQWLLDNCKQANVYAELAGVNNIV
                     IDSTDAYKAMMNNIAFTLSLYSGQMCTTTQVILVPAQGIQTEDGHKTFDEVCADLAKS
                     VERFLSKPEVAHAVLGAIQSPATVERIEQANSGALGHVLLASQALSNPDFPDAVVRTP
                     VLLSCDSQDESAYMEERFGPISFVVKVADTKAAIDLSERLVSTHGALTVGIYSTDDQV
                     LEAMTQATWRSKVALSVNLTGSVLVNQSAAFSDFHGTGGNPAGNAAYTDSAFVANRFR
                     VIQRRHHV"
     gene            1386..2183
                     /gene="paaG"
                     /locus_tag="VIC30_05225"
     CDS             1386..2183
                     /gene="paaG"
                     /locus_tag="VIC30_05225"
                     /EC_number="5.3.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004300 - enoyl-CoA hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
                     isomerase PaaG"
                     /protein_id="HEY7803818.1"
                     /translation="MNYQTILLNITDSVATLTLNRPDKLNSFTGQMHAELRHALDSIE
                     DSDQARVLVITGAGRGFCAGQDLADPELATGSGQDPVDLGKLVEQNYKPLVMRLQNLR
                     VPTVAAVNGIAAGAGASLALACDITIAKSCASFMLAFSKIGLIPDTGSTWFYPRRIGM
                     ARALGAAMLAEKLTAAKAADWGLIWEVIDDDDFDKRVLDLANQLASMPTKALVRTREA
                     MRTSMNQSLADQLTLEGQWMSELGISEDYAEGVSAFMQKRVAHFKGR"
     gene            2186..2659
                     /gene="paaI"
                     /locus_tag="VIC30_05230"
     CDS             2186..2659
                     /gene="paaI"
                     /locus_tag="VIC30_05230"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HEY7803819.1"
                     /translation="MDEHAPAVDPQALAQAVAQTMWSRDHAAQALGIRIESAAPGQAQ
                     LLMDVRQDMLNGHDICHGGMIFSLADTAFAYACNAYNQTTVASACHIDFLAPAKRGDT
                     LRAIAIERSRSGRTGVYDIAIETIDGTPIALFRGKSHRIAGEVIASALPTDSTAK"
     gene            2689..4011
                     /gene="paaK"
                     /locus_tag="VIC30_05235"
     CDS             2689..4011
                     /gene="paaK"
                     /locus_tag="VIC30_05235"
                     /EC_number="6.2.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047475 - phenylacetate-CoA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase PaaK"
                     /protein_id="HEY7803820.1"
                     /translation="MTSRQPNPTDLETIETASRDEISALQLERLKWSLRHTYDNVEPY
                     RKRCEQNDVHPDDLKTLGDLAKFPFMTKTDLRDHYPFGLFAVPRQQISRLHASSGTTG
                     KSVVVGYTARDLNHWADLVARSLRAAGVRAGDMVHNAYGYGMFTGGLGAHAGIERLGC
                     TVVPMSGGQTERQVQLIQDFRPDAIMVTPSYSLVIAEAFERAGIAPEDISLKIGIFGA
                     EPWGEGMRTEIERKLAIDAIDIYGLTEVMGPGVACECIETKDGPVIWEDHFYPEIIDP
                     VTEEVLPDGELGELVFTSLTKEAFPVIRYRTRDLTRLLPPTARAFRRIGKLTGRSDDM
                     LIVRGVNVFPTQIEEQVLRDTRLSGNYQIVLTRDGHLDNVEVRCEIQRELSGASEKEI
                     ADIARELQHHIKTNIGISTKVSVLGVESIPRTLTGKAKRVIDERPKQN"
     gene            4029..5237
                     /gene="pcaF"
                     /locus_tag="VIC30_05240"
     CDS             4029..5237
                     /gene="pcaF"
                     /locus_tag="VIC30_05240"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018715826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEY7803821.1"
                     /translation="MKEAFICDAIRTPIGRYGGTLSSVRADDLGALPIAALMQRNPNV
                     DWSRVDDIIYGCANQAGEDNRNVARMCGLLAQLPVDVPGTSVNRLCGSGMDAVGMAAR
                     AIKCSEGELMIAGGVESMSRAPFVMGKAESAFSRQAQIFDTTIGWRFVNPQMKAQYGI
                     DSMPQTADNVAEQFKISRSDQDAFAWRSQQRWAAANAAGRFGDELIPVSVQKSRKADP
                     VVFDTDEHPRPNVTIEDLAKLKGVNGPDLSVTAGNASGVNDGACALLLASETAAKQHR
                     LTPRARVIAMATAGLEPRIMGFGPAPAVRKLLAMTGMTLDQMDVIELNEAFAAQALAV
                     TRDLGLADDEPRVNPNGGAIAMGHPLGMSGARLVTTAMYELHRRQGRYALCTMCIGVG
                     QGIAMVIERV"
     gene            5325..6323
                     /gene="paaA"
                     /locus_tag="VIC30_05245"
     CDS             5325..6323
                     /gene="paaA"
                     /locus_tag="VIC30_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaA"
                     /protein_id="HEY7803822.1"
                     /translation="MYTQAMDIPGQNQTAIAVDLSPEEAGFQSRIAADDRIEPQDWMP
                     EAYRKTLVRQISQHAHSEVVGMLPEGNWISRAPSLKRKAILIAKVQDEGGHGLYLYSA
                     AETLGASRDEMLDALHTGKAKYSSIFNYPTLNWADIGVIGWLVDGAAIMNQIPLCRCS
                     YGPYSRAMVRVCKEESFHQRQGYEALLVMMRGTDKQKEMVQDAVNRWWWKCLAMFGPP
                     DEDSPHSAQAMAWGIKRISNDDLRQKFVDATVPQADVLGVTLPDSDLKWNEERQHYDF
                     GQIDWQEFWDTVQGNGPCNRERLATRVKAHKDGQWVRDAAMAYAQKQAQRAHKEAA"
     gene            6320..6616
                     /gene="paaB"
                     /locus_tag="VIC30_05250"
     CDS             6320..6616
                     /gene="paaB"
                     /locus_tag="VIC30_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009516676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaB"
                     /protein_id="HEY7803823.1"
                     /translation="MNTPALKDWPLWEVFIRSKQGLEHKHCGSLHAADAEQALRMARD
                     VYTRRQEGVSIWVVPSSNITASNPDNKGELFDPAADKIYRHPTFYDIPDEVGHM"
     gene            6616..7398
                     /gene="paaC"
                     /locus_tag="VIC30_05255"
     CDS             6616..7398
                     /gene="paaC"
                     /locus_tag="VIC30_05255"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018715822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HEY7803824.1"
                     /translation="MKAPVEYLLHLADNAVVLGQRNAEWCGHGPILEEDLALANVSLD
                     LIGQARLLYQLAAKRMGGDATEDSLAYLRDDTEFRNYTLLELPNFGPLVGYAASDRDY
                     ATTIVRNFLYHALMVLVWDKLGQSPDEDLAAIAQKSIKESRYHLDHTRDWVIRFGDGT
                     PESHDRAQKALDYLFPYTAEFWVASDIETKANASGAAIDVASLRASWDHIVDDTLALA
                     TLTEPTVKGYVPQGKQGVHSEHLNYLLSEMQSLARAHPEATW"
     gene            7416..7916
                     /gene="paaD"
                     /locus_tag="VIC30_05260"
     CDS             7416..7916
                     /gene="paaD"
                     /locus_tag="VIC30_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006998528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HEY7803825.1"
                     /translation="MSESVEKAWTLLEELTDPEIPVVTLRELGILRDIRQNATGIEVV
                     ITPTYSGCPAMDQIEDDVKSVLRSAGLDATVITQLSPAWTTDWMTDQAKDKLRAYGIA
                     PPHTTASSGNRIHLTRKDPTSEPIECPHCGSNHTTVISQFGSTSCKALYKCLECREPF
                     DYFKPY"
     gene            7935..9032
                     /gene="paaE"
                     /locus_tag="VIC30_05265"
     CDS             7935..9032
                     /gene="paaE"
                     /locus_tag="VIC30_05265"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaE"
                     /protein_id="HEY7803826.1"
                     /translation="MSSPRFQDLAVKRVTPEAAGAVAITFEIPEPERASFNFEPGQFL
                     TLRASINGQDVRRNYSISSPRSRLHNKGELEIGIRPVEGGLFSNWAATSVKPGDRIAV
                     MPPDGRFVVKKKRAIHRVGFAAGSGITPILSIAATTLEEQPDSKFTLVYGNRRMSSVM
                     FNETLQDLKDRYRDRLTMIHVLSRQAQEVDLLQGRIDSQKVNDLLNTLLPVGSLDEVF
                     ICGPDEMISETEAALKQAGLAEERIRTERFTVNLPAGANPVGTQTAAAEKAEASKDIS
                     MTLILDGMEHEIPLSKQDKVLDAALLAGLDLPYSCKAGVCCTCRAKVLEGSTTMEKNF
                     TLEEDEVQQGFVLTCQASVTSPHLVISFDER"
BASE COUNT         2295 a         2481 c         2460 g         2019 t
ORIGIN      
        1 gcggccatgc ccggatggca agccatcggt gctgagggtc gcaccggtat ctgtctggaa
       61 atcctgcatc gactcaatca acaaagtttc gagattggtc acgctgtcat gatgactagc
      121 ggtcaaggct ggatgatggc attccaggct ggcggtccac atgcccaaga tcgtgctctg
      181 gaggctgtca cttacgcttg gcgcgagcaa agctttgtgc catctcaagc actgtgggaa
      241 aagccccagg gcaagaaccc gcccatcgag atgcgtaagc attttgagat tgtgggtcga
      301 ggtgtcggtc ttgtcatcgg ttgtggcacg tttccgactt ggaacactta ccctggtttg
      361 tttgcgacac tggccacagg caatggtgtc atcgtcaaac cgcacagcaa ctcggtgcta
      421 cctgctgcca ttacagtgaa aactatccgc gacgttctga gcgaatatgg cattgacccg
      481 aacttggtta gtctttgtgt cgcacccgac cgatcggtga cacaaaagct aaccactcac
      541 cctgatatca agtctgtaga cttcaccggc ggcaacgcgt ttgggcaatg gcttctggat
      601 aactgcaagc aagccaacgt ctatgccgaa ctcgctggcg tgaacaacat agtcattgac
      661 tcgacagatg cctacaaagc gatgatgaac aatatcgcct ttacgctgtc gttgtattcc
      721 ggacaaatgt gcaccacaac gcaggtcatt ctggtgccgg cgcaaggcat tcaaaccgaa
      781 gatggccaca aaacattcga tgaagtctgc gccgatctgg ccaagagtgt tgagcgattt
      841 ctatcaaagc ccgaagtcgc acatgcggtg cttggggcta tccagtcacc ggcgactgtc
      901 gagcgaatcg aacaggccaa cagcggggca cttggtcacg ttctattggc atcgcaagcg
      961 ctttctaacc cagactttcc agatgccgtc gtgcgaacgc cggtcctgtt gagctgtgat
     1021 tcacaagatg agtccgcata catggaagaa cgcttcgggc caatcagttt tgtagtcaaa
     1081 gtcgccgaca ctaaggccgc tattgatttg tctgaacgat tggtcagtac acatggggca
     1141 ctgactgttg gtatttattc cactgacgat caggtgctcg aagcaatgac acaggctact
     1201 tggcgcagca aagtggcact gtcggtcaac ctcacaggta gcgtactggt aaatcagtcg
     1261 gccgcatttt ctgatttcca tggcacgggg ggcaatcctg cgggcaatgc ggcctacacc
     1321 gacagcgctt ttgtggcgaa tcgattccgc gtgattcaac gccgtcatca cgtataaggc
     1381 ctgccatgaa ctatcaaacc attttgctca atatcacgga ctcagtggca acactgacgc
     1441 taaaccgacc ggataagctc aacagcttca ccgggcagat gcacgccgag ttgcgacacg
     1501 cattagatag catcgaggat agcgatcagg cccgcgtatt agtgatcact ggcgctggac
     1561 gcgggttttg tgcgggacag gatcttgctg accctgaact ggcaaccgga tcaggccaag
     1621 accccgttga tcttggcaaa ttggtggagc aaaactacaa acccttggtc atgcgcctac
     1681 agaaccttcg cgtaccaacg gttgcagctg tcaacggcat tgctgcaggt gccggtgcaa
     1741 gcctggctct ggcttgtgac atcacaatcg ccaaatcctg cgcctccttt atgctcgctt
     1801 tcagcaaaat cggattaatt cctgacacag gcagcacctg gttctaccct aggcgtatcg
     1861 gcatggcacg agcactcggt gcagccatgc tggcagaaaa actgacagcg gccaaggcgg
     1921 ctgactgggg tctcatttgg gaggtcattg atgacgatga ctttgacaag cgcgtcttgg
     1981 atttagcaaa ccagctagcc agcatgccca ccaaagccct tgtgcgtacc cgtgaggcca
     2041 tgcgaacaag catgaatcaa tcattggctg atcagctcac gcttgaaggc caatggatga
     2101 gcgaactcgg tatctcagaa gactatgcgg aaggtgtcag cgcgtttatg caaaagcgtg
     2161 ttgcgcattt caaggggaga taagcatgga tgagcacgca ccagcagtgg atccacaagc
     2221 gttagcgcag gccgtcgcgc agaccatgtg gtcgcgtgat cacgccgcac aagcccttgg
     2281 aatccggatt gaatcagcgg ccccaggcca ggcgcagttg ctcatggacg tgcggcaaga
     2341 catgctaaat ggtcacgata tttgccacgg cggcatgata tttagcctgg ccgacacagc
     2401 gtttgcctat gcgtgcaacg catacaacca aacaaccgtt gcgtcggcct gccacattga
     2461 ctttctggct ccagccaaac ggggtgacac attgcgcgcc attgccatcg agcgttcgcg
     2521 ttcaggtcgc actggtgtgt atgacattgc cattgagaca atagacggca cgccaattgc
     2581 cttatttaga ggcaaaagcc atcgaattgc tggtgaagtg atcgccagtg cgctgcccac
     2641 ggacagcaca gcaaaataac aaagaccgct cataaaccgg aggagacagt gaccagtaga
     2701 caacccaacc caactgactt ggaaaccata gagaccgcca gtcgagacga gatttctgcc
     2761 ctgcagcttg agcgtctgaa gtggtcattg cggcacacct atgacaatgt cgagccctac
     2821 cgcaaacgct gtgagcaaaa cgatgtgcat ccagatgact taaaaacact cggtgaccta
     2881 gccaagtttc cctttatgac taaaacggac ttgcgtgatc actatccgtt tggactattt
     2941 gccgtgcccc gtcagcagat ctcccggctt cacgcctcga gcgggaccac gggcaagtca
     3001 gttgttgtcg gttacaccgc ccgtgatctc aatcactggg ccgatcttgt ggcacgttca
     3061 ctgcgtgcag ctggtgtgcg cgccggcgac atggtgcata acgcctatgg gtatggcatg
     3121 ttcacgggtg gactcggtgc tcacgccggc atcgagcgtt tgggctgtac ggtcgtaccg
     3181 atgtcgggcg gtcaaaccga gcggcaggtc cagttgattc aggactttcg acccgatgcc
     3241 atcatggtga ccccctctta ctctttggtc atcgccgaag cgtttgagcg cgcaggcatc
     3301 gcaccggaag atatttcatt gaaaatcggc atctttggtg ctgaaccctg gggcgaaggc
     3361 atgcgcaccg agatagaacg caagctcgcc atcgacgcca ttgacattta cgggttgact
     3421 gaagtcatgg gccctggcgt ggcctgtgaa tgcattgaaa ccaaagatgg gccagtcatt
     3481 tgggaagatc atttctaccc tgaaatcatt gatcccgtca ctgaagaagt gctacccgat
     3541 ggcgaactag gtgagcttgt cttcacctct ttgaccaaag aggcctttcc cgtcattcgc
     3601 taccgcacgc gcgatctaac caggctgttg ccgccaacag ctcgtgcctt tcgacgcatt
     3661 ggtaaattga ccggtcgatc agatgacatg ctgatcgtgc gcggggtcaa cgtgttccct
     3721 acgcagatcg aagaacaagt gttgcgtgac acgcgcctga gcggtaacta tcaaatcgta
     3781 ttaacccgcg atgggcatct cgacaacgtc gaggtacgtt gcgagataca acgcgaactc
     3841 tctggcgcat cagaaaaaga gattgccgac atcgcccgtg aattgcagca ccacatcaaa
     3901 accaacatcg gtatcagcac caaagtcagc gtactaggtg ttgagtccat tccacgcaca
     3961 ctgactggca aagccaaacg tgtgattgat gagcgaccga aacagaacta atcaccacag
     4021 agaacatcat gaaagaagct tttatctgcg atgccattcg cacccccatc ggccgttacg
     4081 gtggcacact ttcatcagtg cgtgccgatg atcttggcgc actccctatc gccgccctca
     4141 tgcaacgcaa ccccaacgtt gactggtcgc gagttgacga tattatttac ggttgcgcca
     4201 accaagccgg ggaagacaac cgcaacgtgg cgcgcatgtg cggattgctt gcacaactcc
     4261 ccgtggatgt gccaggcacg agcgtgaatc gcttatgcgg ctccggcatg gatgccgttg
     4321 ggatggcggc tcgtgccatc aaatgctcag aaggcgagct gatgattgcg ggcggcgtcg
     4381 aaagcatgtc gcgcgcgcct tttgtcatgg gcaaagccga atcagctttt tcaagacaag
     4441 cccagatctt tgacaccaca attggctggc gctttgtcaa cccacaaatg aaagcgcaat
     4501 acggcattga cagcatgcca caaacagccg acaacgtcgc tgagcaattc aaaatctctc
     4561 gctctgatca ggatgcattt gcatggcgtt cacaacaacg ctgggccgct gccaatgcgg
     4621 ctggtcgttt cggtgacgag ctgatacccg tgtcggttca aaaaagccgc aaggctgatc
     4681 cggtagtgtt tgacacagat gagcaccctc ggcccaacgt caccatcgaa gacttggcca
     4741 aactcaaggg tgttaatgga cctgatctga gcgtgactgc gggcaatgcc tccggtgtca
     4801 acgatggcgc atgcgcttta ctactagcct ctgaaaccgc ggctaaacag catcgcctga
     4861 cgccccgtgc tcgcgtgatc gccatggcaa cggccggtct ggagccacgc atcatggggt
     4921 ttggaccggc accagccgtg cgcaaactat tggcaatgac aggcatgaca ctggatcaaa
     4981 tggatgtcat tgaactgaat gaagcattcg ccgctcaggc acttgccgtt actcgggatc
     5041 ttggcctggc tgacgatgaa ccgcgagtca accctaacgg tggcgctatc gcgatgggtc
     5101 acccattggg aatgagtggt gccaggttgg tcacgactgc catgtatgaa ctacaccgcc
     5161 gtcaaggacg ttatgcactt tgcaccatgt gcattggtgt gggtcaaggt attgccatgg
     5221 tgattgaacg ggtttaacga aagttttgat ggtgttttag cgaattaaag atgctggcaa
     5281 caaggttata ggaccgaatg ccagacacta caggagagga agatatgtat acgcaagcga
     5341 tggatatccc cggccagaac caaactgcaa ttgcagtcga tttaagccca gaagaagcgg
     5401 gttttcagtc acgcatcgcc gctgatgatc gaatcgaacc acaggactgg atgcctgagg
     5461 cctaccgtaa gacactggtt cgccaaatca gtcaacatgc acacagcgaa gtcgtcggca
     5521 tgttgccaga gggcaactgg atctcgcgcg cgcctagcct caagcgcaaa gccattttga
     5581 tcgctaaagt gcaagacgaa ggcggtcatg ggctgtattt gtacagcgca gccgagacgc
     5641 tcggtgctag tcgcgacgag atgcttgatg cgctacacac tggcaaagcg aagtacagct
     5701 ccatctttaa ctaccccacg ctgaactggg ccgatattgg cgtcatcgga tggttagttg
     5761 acggtgcggc aatcatgaat cagatccctc tgtgccgctg ctcatatggc ccctactcac
     5821 gagccatggt acgtgtctgc aaggaagagt cgttccatca acgtcagggt tatgaagcgc
     5881 tgctagtcat gatgcgcggc accgacaaac aaaaagaaat ggtgcaagat gcggtcaacc
     5941 gttggtggtg gaagtgcttg gccatgttcg gcccccccga tgaagacagc cctcactcag
     6001 cccaggcgat ggcttggggt atcaaacgca tcagcaacga tgacttacgg caaaaatttg
     6061 tcgatgcgac tgtgccgcaa gccgacgtac ttggcgtgac acttcccgat tcagatctga
     6121 aatggaatga agagcgtcaa cactacgatt tcgggcaaat tgactggcaa gaattctggg
     6181 atacggttca aggcaatggc ccctgcaacc gggagcgcct cgccactcgt gtcaaagcac
     6241 ataaagatgg tcaatgggtt cgtgatgccg ccatggctta tgcacaaaaa caagcacaac
     6301 gtgctcacaa ggaggccgca tgaatacccc tgccttaaaa gattggcctt tatgggaagt
     6361 ttttattcgc agcaaacaag gccttgaaca taagcattgc ggtagcctgc atgccgctga
     6421 tgcagaacaa gcactgcgta tggctcgtga tgtctatacg cgtcgccaag agggcgtcag
     6481 catctgggtg gtgccgtctt cgaacatcac ggcaagcaac cctgacaata aaggtgagtt
     6541 gtttgatccg gccgctgaca agatttatcg gcatccaact ttttatgaca tccctgacga
     6601 agtggggcac atgtgatgaa agcacctgtc gaatatttgc ttcacctggc cgacaacgca
     6661 gtcgtgctcg ggcaacgtaa cgccgagtgg tgtggtcatg gtcctatatt ggaagaagac
     6721 ctcgccttgg ctaacgtcag ccttgatctg atcgggcagg cacgtctgct ttatcaactc
     6781 gcggccaaac gcatgggtgg tgacgccacg gaagatagcc tggcttacct tcgcgatgac
     6841 accgagtttc gcaactatac attgctcgaa ctgccaaatt ttgggccgct cgttgggtat
     6901 gctgcgagtg atcgcgatta cgccaccacc atcgtgcgta attttctcta ccacgcactg
     6961 atggtgctcg tctgggacaa gcttggccaa tcacccgacg aggacttggc tgcaattgcc
     7021 cagaaatcca tcaaagagag tcgctatcac ctcgatcaca cacgcgactg ggtcattcgc
     7081 ttcggtgatg gcacaccaga gtcccatgac cgtgctcaga aagcgcttga ttacctgttt
     7141 ccatacactg ccgaattttg ggtcgccagc gatattgaga cgaaggccaa cgcctctggc
     7201 gcggctatcg atgttgcgag cctacgtgca tcatgggatc acatcgttga tgacacactg
     7261 gctctagcaa ccctgaccga gccaacggtc aaaggctacg taccacaggg caagcaaggt
     7321 gtgcactctg aacatttgaa ctatctactc agtgagatgc aaagtctggc ccgcgctcac
     7381 cctgaggcga cttggtaacg gatgcagagc aaacaatgag tgagagcgta gaaaaagcat
     7441 ggacattgct agaggagcta acggatcctg agatcccggt ggtcaccttg cgtgagctcg
     7501 ggatactcag agatatccgt caaaatgcca ccggtattga ggtcgtaatc acaccgactt
     7561 atagcggctg ccctgcgatg gatcaaattg aagatgacgt gaaatccgtg ctgagatcag
     7621 ccgggctgga cgcaaccgtt atcacacaac tatcaccggc ttggacaact gactggatga
     7681 cggatcaagc caaagacaag ttacgcgcct acggcatagc accgccgcat acaactgcct
     7741 cgtctggcaa cagaattcat ctaactcgta aagaccctac atccgaaccc attgaatgcc
     7801 cgcattgcgg ctcgaatcac acaacggtca tatcccagtt tggctcaacg tcgtgcaagg
     7861 cactgtacaa gtgtctcgaa tgtcgagagc cctttgacta cttcaaacct tactaaaagg
     7921 gcggagaact tatcatgtca tccccacgtt tccaagattt agcggtcaag cgtgtcacac
     7981 ctgaggccgc cggtgccgtt gccatcacat ttgagattcc agaaccagaa cgggcatcct
     8041 ttaacttcga gcctggacag tttcttaccc ttcgtgcttc gatcaacggt caagatgtgc
     8101 gacgcaatta ctcaatcagc agcccgcgaa gccgacttca caataagggc gaactcgaga
     8161 tcggcatacg acccgttgaa ggtggtttgt tttctaactg ggccgctacc tcggtcaaac
     8221 ctggcgacag aattgctgtc atgccgcccg acggacggtt tgtcgtcaag aaaaaacgcg
     8281 ccatccatcg agtaggattt gctgcgggtt ctggcatcac acctattttg tcgattgccg
     8341 caaccacgct tgaggaacag cctgattcca aattcacgct agtgtacggt aatcgtcgaa
     8401 tgtctagcgt gatgtttaac gaaacccttc aggacttaaa agatcgctat agagatcgtt
     8461 tgaccatgat tcatgtcctc tcgaggcagg cgcaagaagt ggatttattg caggggcgta
     8521 tcgacagtca aaaagtcaat gatcttctca atacattact gccggtaggc agtctcgatg
     8581 aagtcttcat ctgcgggccc gatgagatga tcagcgagac tgaagcagcg ctcaagcaag
     8641 caggcttggc cgaagaacgg attcggacag agcggttcac ggtaaatctg ccagcaggtg
     8701 caaaccctgt cggcacgcaa acagctgctg cggaaaaagc cgaagcatcc aaagatattt
     8761 cgatgacact catactagat gggatggagc atgaaattcc cctatcgaag caagacaaag
     8821 tgctcgatgc tgccctgcta gccgggcttg acctgcctta ctcttgcaaa gccggtgttt
     8881 gttgcacctg cagagccaag gttctcgaag ggtcaaccac catggagaaa aactttacgc
     8941 tcgaagaaga tgaagtgcag caaggttttg ttttaacgtg tcaggcaagt gtgacaagtc
     9001 cgcaccttgt tattagcttc gacgagcgct agtgcgagtc gtgagtgcac gggtctttgc
     9061 cactgacaag tagtggttag acccgaaaac aacactcaaa cataacgagg ggcctagcgc
     9121 acagacagag tcttaatgag ctatgcaacc ttggccatta caaccattac aaccgctcag
     9181 ccaacacgct taagatacgc gtagatgtct cgtcgttttg ttggacacct tgatcgttgt
     9241 atacgcgcac aacag
//
LOCUS       DATBNL010000313         3216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_33658, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000313 DATBNL010000000
VERSION     DATBNL010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33658"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /gene="dacB"
                     /locus_tag="VIC30_05270"
     CDS             <1..960
                     /gene="dacB"
                     /locus_tag="VIC30_05270"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEY7803827.1"
                     /translation="AINPGDFDGKPDRPYNASPDAFMIGFGALRLVFTPDLQSKRWRA
                     FVDPPIDGVDIDSNIKYLDGSCRRGPNVGIRMVENGNDVRFRVDGQAYGACGEFDFYR
                     LAFDQQAFAARALRSMWTELGGTMTGEVKAGTTPNNAMPVAAHQSPPLAEVIRLVNKR
                     SNNVMTRVLMLTLGAQFGPRPATVASSAEVVKQIISRQGIELGQTVVDNGSGLSRDAR
                     ISADVMSDILQHAWRSPTMPEFVSSMAILGIDGTLRRRLSNNDARGYANMKTGALKNA
                     RAIAGYVLAKSGKRYVFVSLVNHPQAYKARDFENSVMDWLNER"
     gene            1035..1676
                     /gene="upp"
                     /locus_tag="VIC30_05275"
     CDS             1035..1676
                     /gene="upp"
                     /locus_tag="VIC30_05275"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003819789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEY7803828.1"
                     /translation="MALHEIKHPLVKHKLGLMRGAALSTKSFRELAQEVTTLLMYEAS
                     KDFAMEAHQEQGWAGEVTVERVAGKKVTVVPILRAGIGMLDGVLHLIPGARVSTVGLA
                     RNEDTLQAHTYYERLVGQLEQRTAIIVDPMLATGGSMVAAIELLKKSGAKDIRALVLV
                     AAPEGIKRVMDAHPDVAIYTAAVDQGLNEHGYIVPGLGDAGDRVFGTKQKHPD"
     gene            1712..2686
                     /locus_tag="VIC30_05280"
     CDS             1712..2686
                     /locus_tag="VIC30_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY7803829.1"
                     /translation="MTVKTSAWLLPLLAVLVVASMLTGPAKVGLAELGDWFTGQANAQ
                     TNLVLGELRWPRTLMSLLTGATLAAGGAVMQSLFRNPLAEPGLVGVSAGAALGAVAAM
                     ALGVTGFLVIGAAGFVGAVTATAIAWQFARGWPSSAGLLLAGVAINALVASLISLLIA
                     FAPDAQLRSMTFWTLGSMSRTPWPVVVALAIWLPLGFWWLYRHWPALNALLLGESQAA
                     HVGVNVSALRASLIVAMALLIGPLVAFTGAISFVGLLVPQLVRRLYGSDHRQLLPIAA
                     VMGAAAVLAADILSRVLIAPAELPVGVVISLIGAPAFLWVLRRTVTRC"
     gene            complement(2696..>3216)
                     /locus_tag="VIC30_05285"
     CDS             complement(2696..>3216)
                     /locus_tag="VIC30_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927883.1"
                     /note="catalyzes the decarboxylation of
                     3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-octaprenyl-4-hydroxybenzoate decarboxylase"
                     /protein_id="HEY7803830.1"
                     /translation="TTYTGKPPDEPAVLGVALNEVFVPLLQRQLPEIKDFYLPPEGCS
                     YRLAVISIRKQYPGHAKRVMFGIWSILRQFMYTKFLIVVDDDIDTRDWKEVVWAMTTR
                     MDPVRDTITAENTPIDYLDFASPVSGLGGKLGMDATNKWSGETDREWGRPIKMDQDTK
                     NRVDDLWGSLGL"
BASE COUNT          670 a          802 c          962 g          782 t
ORIGIN      
        1 gcgattaacc ccggtgattt cgatggcaaa cccgatcgac cttataacgc gagtcctgat
       61 gcattcatga ttggttttgg tgctttgcgc ctggtgttca cgccggattt gcagtccaaa
      121 cgttggcgtg cgtttgtaga cccaccgatt gatggcgtgg atatcgacag caacatcaag
      181 tacctcgacg gcagttgccg gcgtggtccg aatgtgggca ttcgcatggt tgaaaacggc
      241 aatgatgtgc ggtttcgtgt cgatggccaa gcttacggtg cttgtggtga atttgatttc
      301 taccgtctag ccttcgatca gcaagccttc gccgcacgcg cacttcgtag tatgtggacg
      361 gagttgggcg gcacgatgac cggcgaagtc aaagccggaa cgaccccgaa caatgccatg
      421 ccagttgctg cacatcagtc gccgcctctt gctgaagtca tacgtttggt caataagcgc
      481 agcaacaacg ttatgacgcg agtgttgatg ctcacgcttg gtgcacagtt tggtccgcga
      541 ccagccacgg tggccagcag cgcggaggtg gttaaacaaa tcatttcccg tcagggcatt
      601 gagcttggtc agaccgtggt cgacaatggg tctgggttgt cacgcgacgc taggatcagc
      661 gctgacgtca tgtcagacat cttgcaacac gcatggcgct cgcccacgat gcctgagttc
      721 gtctcatcga tggcgattct gggtattgat ggcacgctca gacgtcgtct aagtaacaat
      781 gacgctagag gctacgcgaa catgaaaacc ggtgcactta aaaacgccag agcaatcgcc
      841 ggttatgtct tggccaagtc tggtaagcgc tacgtgtttg taagcctggt caatcatccc
      901 caagcctaca aagcgcgcga ttttgagaac tcggtaatgg attggctaaa tgagcgttga
      961 tgccgaccaa aaccagaacc aaaacccggg cggtatcggc gtaactaaaa cagtacacag
     1021 caggagaagg tcgcgtggca ttgcatgaaa tcaagcaccc tttggtcaag cacaagctcg
     1081 ggttgatgcg cggtgctgcg cttagcacca aaagtttccg agagctagcg caagaagtca
     1141 ccacattgct gatgtatgaa gccagcaaag actttgccat ggaggcgcat caagagcagg
     1201 gctgggcagg tgaggtaact gttgagcggg tggctggtaa gaaagtgacg gtcgtaccga
     1261 tcttgcgtgc aggcattggc atgcttgacg gggtgctgca tttgattcca ggtgcgcgcg
     1321 tcagtacggt tggtttagcc cgcaacgaag atacgttgca agcccacacc tattacgagc
     1381 gtttggttgg gcaactagag caacgcaccg cgatcatcgt ggatccgatg ttggcgaccg
     1441 gtggttccat ggttgccgcc atcgagttac tcaaaaaatc cggtgccaaa gatattcggg
     1501 cgctggtgtt ggtcgctgca cctgagggta tcaaacgtgt aatggacgcc catcctgatg
     1561 tggcaatcta caccgcagca gtcgaccaag gtttaaatga gcatggctat atcgtgccag
     1621 gtctgggaga cgccggtgac cgtgtgttcg gtaccaaaca aaagcacccg gactagggtg
     1681 ttgcggttta agcagaaacc actcagagac catgaccgtt aaaacaagcg cgtggctgtt
     1741 gccgctgctg gccgtgttgg tggtcgctag catgctgacc ggcccagcaa aggttggtct
     1801 ggccgagctt ggtgattggt tcaccgggca ggcaaatgca caaacgaatt tggtgcttgg
     1861 tgagttgcgt tggcccagaa ccttgatgtc gctgctcacg ggagcgaccc tagctgccgg
     1921 tggtgcggtc atgcagagcc tatttcgcaa cccattggct gagcctggtt tggtgggagt
     1981 ctctgcaggg gcggcacttg gggccgtggc tgccatggca ttgggtgtta ccggtttttt
     2041 ggtgatcggt gcagctggtt tcgtgggcgc ggttactgcc acggcgattg cttggcagtt
     2101 cgcacgtggc tggccaagtt ccgcgggttt gctgctggcc ggtgtggcca ttaatgcatt
     2161 ggtggcaagc ttgattagcc tcttgattgc ctttgccccc gatgcacaac tacgttcgat
     2221 gacgttttgg acacttggca gcatgagtcg cacgccttgg cctgttgtcg tcgcgctcgc
     2281 tatatggttg ccgttggggt tttggtggtt gtatcgacac tggccagcct taaacgcgct
     2341 attgcttggt gagtcacaag cagcacatgt tggtgtcaat gtatcggcgc tgcgtgccag
     2401 cctgatcgtg gccatggcat tgttgattgg accgttggtg gcatttactg gcgcaatcag
     2461 ttttgtggga cttttagtgc cacagcttgt gcgccgtctt tacggcagtg atcatcgcca
     2521 actgttgccg attgctgcag tgatgggggc ggccgccgta ttggcggccg acattttgtc
     2581 gcgcgtgttg attgcaccag cagagttacc ggttggtgtg gtgatcagct taatcggcgc
     2641 acccgccttt ttgtgggtgt tgcgccgaac agtgacgcga tgttagagac ctgtgttaaa
     2701 gacctagtga gccccacaaa tcatcgaccc ggtttttagt gtcttgatcc atttttatcg
     2761 gacgacccca ttcacgatct gtctcacctg accacttgtt ggtggcgtcc atgccaagct
     2821 tgccaccgag acctgagaca ggtgaagcaa agtccaagta gtcaatgggt gtgttttctg
     2881 cggtgatcgt gtcacgcact ggatccatgc gggtggtcat ggcccagacc acttctttcc
     2941 agtcgcgtgt gtcgatgtca tcgtcgacca cgatcaggaa cttggtgtac atgaattggc
     3001 gcaaaatact ccaaatgccg aacatcacac gtttggcgtg accgggatat tgtttgcgta
     3061 tggaaatcac agccaaacga taactgcaac cttccggcgg cagataaaag tctttgatct
     3121 caggcaactg gcgttgcaac aacggcacaa agacctcgtt taacgctacc ccgagcacgg
     3181 ctggctcgtc tggcggcttg ccggtgtagg tggtga
//
LOCUS       DATBNL010000314         2347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_93462, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000314 DATBNL010000000
VERSION     DATBNL010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93462"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VIC30_05290"
     CDS             complement(<1..623)
                     /locus_tag="VIC30_05290"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7803831.1"
                     /translation="MMAYLVAGLLGMLALTIPVGIVLFLLGFGVDSFFSVFPLMKALG
                     RMVWSTSNSSSLIAIPFFILLGEILVRSGIAKTTYSALDRWVSWLPGGLVHANIATAT
                     MFSATSGSSVATAASVSTVAMPQAKALGYDPRLFSGAIAAGGTLGIMIPPSINLIVYG
                     FLTQSSIPQLFLAGLVPGILLALGFMAITAIICAVKPGLGGQRRHFT"
     gene            complement(620..1168)
                     /locus_tag="VIC30_05295"
     CDS             complement(620..1168)
                     /locus_tag="VIC30_05295"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY7803832.1"
                     /translation="MIDAVLRGVKAVNRVTLIGLGILLWGGVMIVLVDITLRLFGTSL
                     GGTDEISGYLMAILAAWGMGYTLTVLGHIRIEALRDRLGDNLKLALDVLAIASVAVVI
                     TLIAIEGWPVLERSWLSDSRANTPLETLLWTVQLPWLLGWAWFALVAWVQFLAALVLI
                     VQGKKARALELIGTANEGQPQS"
     gene            complement(1208..2239)
                     /locus_tag="VIC30_05300"
     CDS             complement(1208..2239)
                     /locus_tag="VIC30_05300"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY7803833.1"
                     /translation="MKSKLIMTAVASVFCVSAYAESLSVVGSWSSLPLHNQYEKPYWT
                     ETLPKASNGEIDITMTTHNQMGTAVGDVFRLLGDGVYDVAMTVGDYAVADAPELEGLD
                     VPLVALTADQARAMVDAARPMVDEIFRDRFNSHVLAIAPYPPQVVFCNAEVNTLDDLK
                     GKKIRASGRMTAKFLEALGAEGVNVAFSEVPGALQKGVVDCAVTGAGSGYSAGWWEVS
                     THLMAIPLGGWDPVVTAVNLDKWNSLSADQQKLITDTIKTDFEDPAWAAAQTALVNDI
                     ACLTGNGACPAGDTRDMVLVEVSDADFTRAKTVLIEQVLPEWSERAGGNWGQRWSDSV
                     GEVVGVSIK"
BASE COUNT          609 a          697 c          582 g          459 t
ORIGIN      
        1 caagtgaaat gccggcgctg gccaccgagt cctggtttga ccgcacagat gattgccgtg
       61 atggccataa acccaagtgc tagcaagatg cctggcacca gccccgcgag aaacaattgc
      121 gggatcgagc tttgggtcaa gaacccgtaa acaatcagat taatagacgg cgggatcatg
      181 atccctaagg tgccacccgc ggcaatcgcc ccagaaaaca gtcgcgggtc ataccccaac
      241 gccttggcct gcggcatggc caccgtactg acactggctg ctgtggcaac ggatgatccc
      301 gaagtggcgg agaacatggt cgctgtggca atgttggcgt gcaccaagcc gccaggcaac
      361 catgacaccc aacggtctag tgcgctatat gtggttttag caatgccaga gcgaaccaag
      421 atctcgccta acaagataaa aaacgggatg gcaatgagcg atgacgaatt agaggtggac
      481 cacaccatcc gtccgagtgc tttcatgagt gggaaaacac taaaaaagct gtcaacgcca
      541 aagcccaaca aaaaaagcac aatgccaacc gggatggtca gtgccagcat cccaaggagc
      601 ccagccacca gataggccat catgactggg gctgtccttc attggccgtg ccaatgagtt
      661 caagcgcgcg agctttcttg ccttgcacga tcagcacaag cgctgccaga aactgaaccc
      721 aagctactaa agcaaaccaa gcccagccca gtagccacgg cagttgcacg gtccacaaca
      781 atgtctcaag cggcgtattg gcccgagagt cgcttaacca ggagcgctct aacactggcc
      841 agccttcaat ggcaatgagg gtgatcacca cagcgaccga tgcaatcgcc aagacatcga
      901 gtgcgagttt gagattgtca ccaagccggt cgcgaagcgc ttcaatccgg atatgaccta
      961 aaactgtcag cgtgtaaccc ataccccaag cggccaagat ggccatgagg tagccgctga
     1021 tttcatctgt accgccaagt gacgtaccaa acaagcgcag ggtgatgtcc acgagcacga
     1081 tcatcacccc gccccagagc aaaataccaa gaccaatgag ggttacgcgg ttcaccgctt
     1141 taactccccg caacacagca tcaatcatgg cgtccttacc tactctttct acgtatcagg
     1201 ctggtactta cttgatggac acaccgacaa cctcaccaac actgtcactc cagcgctgac
     1261 cccagttgcc gcccgcacgc tcggaccact caggcaacac ctgctctatc aatacagtct
     1321 tggcacgcgt gaaatcggca tccgagacct ctaccaaaac catgtcacgc gtatcaccgg
     1381 ccgggcatgc gccattgcca gtcaagcaag cgatgtcatt gaccagcgca gtctgggcag
     1441 ccgcccatgc gggatcttcg aaatcagttt taatggtgtc tgtgatgagt ttttgttggt
     1501 cagctgacaa gctattccac ttatccagat tcaccgctgt cacaaccgga tcccaaccac
     1561 cgagcggaat ggccatcagg tgcgtcgaca cttcccacca gccggctgag taaccagatc
     1621 ctgcaccagt gaccgcgcaa tcaaccacac ccttttgcag tgcgccaggg acttcggaga
     1681 aggccacgtt cacgccctcg gcaccgagtg cctcgagaaa cttggctgtc atacgaccag
     1741 aggcacggat ttttttgccc ttgagatcgt ccagggtgtt gacctctgca ttacaaaaga
     1801 ccacttgtgg agggtatggg gcgatggcca gtacgtggct gttaaaccga tcccggaaaa
     1861 tttcatccac catcggtctg gccgcatcga ccatggcacg cgcttgatca gcagtcaaag
     1921 ccacgagcgg tacatcaaga ccctcaagct ctggcgcatc ggccacagca tagtcaccca
     1981 cggtcatggc cacgtcatag acaccatcgc caagcaggcg aaacacgtca ccgacggctg
     2041 tgcccatctg gttgtgtgtg gtcatggtga tatcgatttc accgttagac gcctttggca
     2101 gcgtctcagt ccaatacggc ttttcatatt ggttatgtag aggcaggctt gaccaactgc
     2161 caaccactga cagtgattcg gcataggcgc taacgcaaaa aaccgacgcc actgccgtca
     2221 tgatgagttt ggatttcata gatatacctc tcggtaaggg atgattaaac agacgcctcg
     2281 tacttgcacc gctttatcga gcagtagcga aacgaaacat atctacagtc tatagcttac
     2341 agttcct
//
LOCUS       DATBNL010000315         1536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_13900, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000315 DATBNL010000000
VERSION     DATBNL010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13900"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..1047)
                     /gene="mreC"
                     /locus_tag="VIC30_05305"
     CDS             complement(136..1047)
                     /gene="mreC"
                     /locus_tag="VIC30_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEY7803834.1"
                     /translation="MASNVDLQLFRRSVPAEVKLVLLSLLCVVMLVVDANSTLLNPLR
                     QGMSLALYPFQRVVMLPRDAVTVVQDYTNAARLLQQESDDLRRQRIELSQVITNAAQL
                     VTENEQLRRLLSVVEQRPEFPTVVVEVLYEPVNPYQRRLIFNKGSEVGIAAGMPVIDE
                     GGVVGQVVRVTPYSSEAALLTDEQLAIPVQLLRNGLRLIAFGSTVPGKVEVRYFSSDA
                     DIAVGDVLVTSGVGGGFPSGLSVATVESVERDSASGFARALAEPTAYPERYRHFLVLK
                     VPLGDSVTSDALSEPIPMGEEGSDARR"
     gene            complement(1146..>1536)
                     /locus_tag="VIC30_05310"
     CDS             complement(1146..>1536)
                     /locus_tag="VIC30_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004628293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEY7803835.1"
                     /translation="RSKEIGSAFPGSEVREIEVKGRNLAEGVPRSFTVSSNEILESLT
                     DPLNQIVSAVKIALENTPPELGADITDKGIALTGGGALLADLDRLLQEETGLPVVVAE
                     DPLTCVVRGCGDALEHLEKLGAIFIDD"
BASE COUNT          400 a          463 c          370 g          303 t
ORIGIN      
        1 aaccgccaag gcagcaagct caataaaaac accaataaaa ttgaacccca gaccacccac
       61 ccatctgttt gcacgtcccg gctgtcagca cccatgccaa cagtgcgcaa caatccactc
      121 gtttgtgggt tcgaattatc gccgcgcatc agagccctcc tcacccatgg gtatcggttc
      181 agacagcgca tcggacgtca ccgaatcacc aagtggcact ttgagcacca gaaagtggcg
      241 ataccgttca ggataggccg ttggctctgc cagggcacgc gcaaaacctg acgccgaatc
      301 gcgctcgaca ctctcgacag tcgccactga caagccagac ggaaatccgc caccgacacc
      361 gcttgtgacc aacacatcgc ccacggcaat gtcggcgtct gaagaaaaat agcgcacctc
      421 gactttgcca ggcaccgttg agccaaatgc aataagccgc aacccattac gcaacagttg
      481 caccgggata gccaactgtt cgtcagttag caaagcagct tcagaagaat atggggtcac
      541 ccgcacaacc tgcccaacca cgccaccctc atcgatgacg ggcatacccg ctgcaatccc
      601 tacttcactg cctttgttaa atatcaaccg ccgttgatag ggattaacgg gctcatataa
      661 aacttccacg accaccgtgg ggaattccgg acgctgctcg actacgctta gcagacgacg
      721 caattgctcg ttttctgtga caagctgagc ggcattggta atcacctgcg acaactcaat
      781 acgttggcga cgcaagtcat cgctttcttg ctgcaacaaa cgcgcagcat tggtgtaatc
      841 ctgcaccacc gttacagcat cacggggcaa catgacgaca cgctggaaag ggtaaagagc
      901 caggctcatg ccctggcgca atggatttaa cagtgtcgaa ttggcatcga ccacgagcat
      961 gaccacgcac aacaggctca gtaatacgag tttgacttcg gcaggcacgc tgcgccgaaa
     1021 taattgaaga tctacattgc ttgccatggc tagctgtcgc agataagaga tggggtcgac
     1081 ctaaaaagcc gatccggctt gctcggcacg cgacggtcat gaggcatgtc cgtcatcgtt
     1141 gaccctcagt cgtcgataaa gatggcacct agcttttcca gatgctcaag cgcatcgccg
     1201 caaccacgca ccacgcaggt cagcgggtct tcagccacta ccacaggcaa cccggtttcc
     1261 tcttgcaata aacggtcaag atcagctagc aaagcaccac cgccagtcaa tgcaatgcct
     1321 ttgtcggtga tgtcggcacc aagttcaggc ggcgtattct cgagcgcgat tttaacggcc
     1381 gacacgatct gattcagcgg gtcagtgagc gactcaagaa tttcattaga agagactgta
     1441 aagctgcgag gcacgccttc ggccaagttg cgacctttta cttcaatctc acggacttcc
     1501 gatcctggga aagcggagcc gatttcttta gatcgg
//
LOCUS       DATBNL010000316         2943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73526, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000316 DATBNL010000000
VERSION     DATBNL010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73526"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..775
                     /locus_tag="VIC30_05315"
     CDS             164..775
                     /locus_tag="VIC30_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803836.1"
                     /translation="MASIYTERHSGVALYCGSAPCVFSDLEEAKKLFPEAPVYGANYT
                     ASMIPEIEHVWSQHDDFAQKIKDDAGRQIYVHTRFSQSMGIDNLWKLKHLRRVYDAVD
                     YVWPDLDWVAGSSGVAGAYWLRHGMGYDKVIICGAPLSIDCLDYSKEYSGYQRNKGRP
                     CAKKKNMQEWLTVLKRNVGPRTEGIYSMSGATQRILGGPDGIR"
     gene            762..1379
                     /locus_tag="VIC30_05320"
     CDS             762..1379
                     /locus_tag="VIC30_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803837.1"
                     /translation="MASGDTKLSICSDALIMLGASPLSSFSEGTDAAQICDRLYDDLK
                     KSLVASYPWSWSFKKVQLARLTSTPANEWKYEYALPGDTLAGVRAVFNTGSTGVQPIQ
                     YGWEIMGDRVQTSEEVIFVDYQFAPNESALPSYFVQLLKYAMAAEIAETVTDQITKAQ
                     YYEQKAYGTLQENRRGGYFRVAANIDGSNNSMEAFQDFTLISVRQ"
     gene            1376..>2943
                     /locus_tag="VIC30_05325"
     CDS             1376..>2943
                     /locus_tag="VIC30_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803838.1"
                     /translation="MSRVIQVQTNFTSGELDPKLRARIDLQQYYNGLETAQNIVIQPQ
                     GGFVRRNGTRYLATLPASAADGARFVHFEFSVNDSYMLLFVDERMYVLKDGVQITDIN
                     GSGNDYLAVTKITDAVIPTMCWAQSADTLIIVQENMVPQKIVRGATDASWTISDLAFD
                     FIPKFAYTLSVSNPAANITPDAEDGKVTITASTSVFSAGNVNRYIDASPQGRARIVEF
                     VSGTVVKAITEVPFFDTSAIASGDWDLEAGYEDTWSVTRGWPRSAVFYEGRLYFGGAS
                     SRPSTLWGSRVGDFFNFDPGESFDDAAIEATLDTGRFNAIIDLYAGRNMQIFTTGGEF
                     YIPQTLGDPITPSNLAVQEQTSNGVRPGIRVVNVDGATVFVQRQGKALAEFIFSDTVN
                     GYISTKISLLSSHLLKSPTDMAVRRATSTDEGDQLLIVNGDDGTIACYTLLRAQEIIA
                     PSEWTTDGEYLAVGVDIEDTYAVVKRNIDGSEVYYVELFSDGLTLDCAKSGTTATTIT
                     GLSFLEGETIKVIR"
BASE COUNT          738 a          700 c          794 g          711 t
ORIGIN      
        1 ttgctcaaag tgggcgacct gatctacgtt tgggattcaa gcgtaccaac aggtagcctt
       61 gtggttgttc tgtctaacgc tgccggtgtc gttgacacaa gcaacgcgac agttctcaca
      121 atgaccgact cagactaaag gacggggcct cggccccttc tttatggcga gtatttatac
      181 tgaaagacac agtggtgttg ctctttattg cgggagcgca ccctgtgttt tttcagattt
      241 ggaagaagca aaaaagctat ttccagaagc tccggtttac ggggcgaatt acactgcaag
      301 catgatccca gagatcgagc acgtttggag tcaacacgat gactttgctc aaaagatcaa
      361 ggacgacgca ggcagacaga tttatgtgca tacgcgtttt agtcagagca tgggtataga
      421 taatctatgg aagctgaaac acttgagacg cgtatatgat gcggtcgact atgtgtggcc
      481 ggatcttgat tgggtcgcag gcagcagtgg ggttgctggg gcttactggc taaggcatgg
      541 catggggtat gacaaagtga ttatctgcgg tgcgccgtta agtattgatt gtttggatta
      601 ttcaaaggaa tactcaggtt atcagcgcaa caaaggccgc ccatgcgcaa aaaagaaaaa
      661 tatgcaagaa tggcttacag tattaaagcg taacgtaggg ccgaggacag aagggattta
      721 ctcaatgtct ggagcgacac agagaatttt aggagggcca gatggcatcc ggtgacacta
      781 aactgtccat ctgttcggac gcgttaatca tgttgggggc ctcgcctctt tcgtcgtttt
      841 cggaaggtac tgacgcggca cagatttgtg accggctgta cgatgacctt aaaaaatccc
      901 ttgttgcgtc gtatccatgg tcttggtctt tcaagaaagt gcagcttgca cgcttgacga
      961 gcaccccggc taacgaatgg aagtacgaat acgcattacc aggcgacacg cttgctggtg
     1021 taagggctgt atttaacaca ggatcaactg gcgttcagcc aatccagtac ggctgggaga
     1081 tcatgggcga cagggttcag acaagcgaag aggttatctt tgtcgattat cagttcgcac
     1141 ccaatgagtc ggccttgccg tcatactttg tgcagctgct gaaatatgca atggcggctg
     1201 agatcgcaga gactgtcacc gaccagatca ctaaggctca gtactatgag caaaaagcgt
     1261 atggcactct acaggaaaac cgtcgcggtg gttacttccg agtcgcagcc aacattgacg
     1321 gttctaacaa ctcaatggag gctttccaag actttacgtt gatctcggtg cgccaatgag
     1381 tcgcgttatt caagttcaga ccaactttac gtctggtgag cttgacccta agttgcgtgc
     1441 gcgcatcgac ctgcaacagt attacaacgg acttgagact gcccagaaca ttgtgatcca
     1501 gccgcagggt gggtttgtcc gacgcaacgg tacccgctat cttgcgacgc taccagcatc
     1561 agcagcagac ggagctcggt ttgtacactt tgagttctca gtcaacgaca gctatatgct
     1621 tttgtttgtc gatgaacgca tgtacgtcct taaggacggc gtgcagatta cagacattaa
     1681 cggatctggt aatgactatt tggcggtgac caagattacc gacgcagtga tcccgacaat
     1741 gtgttgggcg cagtcagctg atacgctaat cattgtgcaa gagaacatgg tcccacaaaa
     1801 gatcgtgcgc ggagccacag acgcgtcttg gacaatctct gacctcgcgt ttgatttcat
     1861 tccaaaattc gcatacacgc tcagcgtgtc gaatccggcg gccaacatta cgcctgacgc
     1921 tgaagatggc aaggtgacaa tcacggcatc tacatctgta ttcagcgccg gcaacgtcaa
     1981 tcggtatatc gacgcatcgc cacagggccg cgctcgcatt gttgaatttg tatccggcac
     2041 agtggttaag gcaatcacag aggtgccgtt ctttgacaca agcgctatcg cttctggtga
     2101 ttgggacctt gaggcgggat acgaggacac ttggtcagtc acacgcggct ggcctcggtc
     2161 ggctgtgttc tacgaaggtc gcttatactt tggtggcgca tcatcgcggc catcaacatt
     2221 gtggggcagc cgagtaggcg acttcttcaa ctttgacccg ggcgagtcgt ttgacgacgc
     2281 cgcgattgag gcgacactgg ataccggccg gttcaatgca atcattgatc tgtatgccgg
     2341 acgaaacatg cagatcttca ccacaggtgg tgagttctac attccgcaaa cattaggtga
     2401 cccaattacg cccagtaatc ttgctgtgca agaacagaca tcaaacggtg tgcgccctgg
     2461 tattcgggtg gtcaacgtgg atggggccac agtatttgta cagcgccaag ggaaggcgct
     2521 agccgagttc atctttagtg acacggtaaa cggctatatc tccaccaaga tctcattgct
     2581 atcgtcgcac ctactcaagt ctccgaccga catggcagtg cgcagagcaa cctcaaccga
     2641 tgagggtgac cagcttttga ttgtcaatgg cgatgacggc accattgcgt gctacacgct
     2701 actgcgagcg caggaaatta ttgcgccatc agaatggact acagacggcg aataccttgc
     2761 tgttggcgtc gacattgaag acacatacgc tgtggttaag cgcaacattg atggcagcga
     2821 agtgtactac gttgaactat ttagcgacgg tctaacgctt gattgtgcaa agagtggtac
     2881 aacggcaaca acaattaccg gtctttcgtt tcttgaaggt gaaacgatta aagtcatccg
     2941 cga
//
LOCUS       DATBNL010000317         2281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_153342, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000317 DATBNL010000000
VERSION     DATBNL010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153342"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VIC30_05330"
     CDS             complement(<1..423)
                     /locus_tag="VIC30_05330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803839.1"
                     /translation="MAENFVLQLLHHADFEGNTNALEDAPRLAALFDHFDDTYVGNTL
                     KLSAGDNWIPSPWYNSQEADQTALVMALQDAYETHFGLSEGTLSGLTVSPGVIDQAIL
                     NLIGIEASTLGNHDFDQGDSGVARIIKMSLDSEATTIDA"
     gene            581..802
                     /locus_tag="VIC30_05335"
     CDS             581..802
                     /locus_tag="VIC30_05335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803840.1"
                     /translation="MAGFTQHRLRALAARLYCHAVLSRGAVSWFLQANHMHTLSVIQV
                     SHTGLTIKFGLVVSCRVLLLFVLLLLGNV"
     gene            888..>2281
                     /locus_tag="VIC30_05340"
     CDS             888..>2281
                     /locus_tag="VIC30_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEY7803841.1"
                     /translation="MTTFIVSNLNDAGAGSLRAAIDAANAANANAASDGAASSVITFA
                     VAGTITLASALPAITSSVVLDATTAPGYDVAQSPVVTLDLNQQDGLVFTTGAQGSGLY
                     GLAIGGAAGDGVTLQAGGMTLDKNYIGLAADGSALANGGDGILMGATAAGNVIGLNES
                     GDQGVVSNVIANNAGNGIAISGGSGHTLAANRIGTDPTGEIDMGNTGHGVHLTNATTG
                     NTIGGTVYVDGATGAVNNPTGTKGTVEPVFVVPPLGNQISGNDGHGVLIDTGSQNNML
                     NGNFIGTRADGNAPIGNGGHGVLISEADNNALIGCAFVDEPFVYYNVLSGNAGDGLRI
                     TDSDNTTVQANFFGVGANNATLVGNAGNGIRVGGDSSNTTVGGVIPLGNVSGGNTLNG
                     IYVTDSASDFISFNTFGGLFAFQGAAPNGQNGIEIDATGGGNELRTNVLSGNLGNGIE
                     ISGHARDVSIDPNIA"
BASE COUNT          493 a          606 c          669 g          513 t
ORIGIN      
        1 ggcatcgatg gtggtggcct cactatcaag gctcatcttg atgatgcggg ccacgcccga
       61 atcaccttga tcaaaatcgt ggttccccag cgttgaggct tcgataccga tcaagttcag
      121 aatcgcctga tcgataacgc cgggactaac cgttagaccg gacagcgtgc cttcgcttag
      181 gccaaagtgc gtctcataag catcttgtag ggccatgacc aaggcggtct ggtcagcctc
      241 ttggctgttg taccaaggcg aaggaatcca gttgtcacct gcagacagct ttaaggtgtt
      301 gcccacgtac gtgtcatcaa agtggtcaaa caaggcagcc aagcggggtg cgtcttctaa
      361 cgcattggtg ttgccttcga aatccgcatg gtgtagcaat tgcaggacaa agttctcagc
      421 catgaaaagc tcctgataga gggaagagtt ttgccgccag aaatcgacgg gcaatagcgc
      481 agccacccgg gatcgggtga atgaaataac gcaatttagc cacgcggtca tgacagggtt
      541 ttgaaggttg cgtgtcagtt tgaagtcaat cgcgtgacac ttggctggtt tcactcagca
      601 tcgcttgcgt gcattggcgg ctcgtttgta ctgccatgcg gtactgtcgc gaggtgcggt
      661 gtcatggttc ttacaggcca accacatgca cacgctatcc gttattcagg tcagccacac
      721 agggctcaca atcaagttcg gtttagtggt gagttgtcgt gtgttgttgc tctttgtttt
      781 gttattgttg ggtaatgtct gaattcatac cgtcgggccg tcaagcctag gcccattggg
      841 gggtttggtc ttgcgccaga tcgcctttga ccttctagga aaaaaacatg acgactttca
      901 tagtgtcaaa tctaaacgat gccggcgcag gctcattgcg cgcggcaatt gatgcggcta
      961 atgcggctaa tgcgaatgct gcgagcgacg gtgccgccag cagtgtcatc acctttgctg
     1021 tggctggcac catcaccttg gccagcgccc tgccggccat cacctcctcg gtcgtgcttg
     1081 atgccaccac agctccgggc tatgacgtgg cgcagtcacc ggtggtgacg ctggatttga
     1141 accaacaaga cggcttggtc tttacaacgg gcgcacaagg ctcgggcctc tacggtctgg
     1201 ccattggggg ggcggctggt gatggcgtga ccctgcaggc cgggggcatg acgctagaca
     1261 agaattacat tggactcgcg gccgatggta gcgccttggc caatggtggt gatggcatct
     1321 tgatgggggc gaccgctgcg ggcaatgtca ttggcctaaa cgagtccggt gaccaaggtg
     1381 tggtcagtaa cgtcattgcc aataacgctg gcaacggcat cgcgatttct ggtggttccg
     1441 gacacacatt ggcggccaat cgaatcggca ccgaccccac gggcgagatc gacatgggca
     1501 ataccggtca tggggtgcac ttaaccaatg ccaccaccgg taacaccatc ggtggcacgg
     1561 tctacgtgga cggcgccacc ggcgcggtta acaacccaac gggtaccaag ggcacagtag
     1621 agccggtgtt tgtggtgccc cctttgggca accagatttc gggcaatgac ggccatgggg
     1681 tgctgattga cacgggttcc cagaacaaca tgctaaacgg caatttcatt ggcacgcgag
     1741 ccgatggcaa tgcgccaatc ggtaacggcg gccatggcgt gttgatctca gaagcagaca
     1801 acaacgcctt gatcggttgc gcgtttgtcg acgaaccctt tgtctactac aacgtattaa
     1861 gtggcaatgc cggcgatggc ctgcgcatca ccgactcgga caacaccacg gtgcaagcca
     1921 acttctttgg cgtgggtgcc aataacgcca cgttggttgg caatgccggc aacggtatcc
     1981 gcgtgggagg cgattcgagc aacaccaccg tgggtggcgt gatcccgctt ggtaacgtct
     2041 ccggtggtaa tacgcttaac gggatttatg tcaccgattc ggcaagcgac tttatttcgt
     2101 tcaacacctt tggaggcttg ttcgcctttc agggcgcagc acccaatgga caaaacggca
     2161 ttgagattga cgccacaggc ggtggcaacg aactgcgcac caacgtgctc tcaggcaacc
     2221 ttggtaacgg cattgaaatc agtggacacg cccgtgatgt ctctattgac cccaatattg
     2281 c
//
LOCUS       DATBNL010000318         1822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_63642, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000318 DATBNL010000000
VERSION     DATBNL010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63642"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..959
                     /locus_tag="VIC30_05345"
     CDS             <1..959
                     /locus_tag="VIC30_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HEY7803842.1"
                     /translation="GVSGSGKSTFAREVLLDNLANAVGIGEPEKWFGCQSIEDWQYID
                     RVLEVDQTPIGKTPRSCPATYIGFWDDIRKQFANTQEARMRGWKTNRFSFNTGDGRCP
                     VCEGQGMRTVEMSFLPDVKVPCDACHGDRFNADTLSARLRGKHVGEVLSMEVDEAVEF
                     FAAHPKVAHPLKLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELAKAKVTDGIIKTG
                     RASRLPHTLYVLDEPTVGLSMADVEKLIHVLHRLTDAGNTVVVIEHNLDVIAEADWVV
                     DLGPEGGSQGGRLVAQGSPDVLIRKHLKQSHTAQALKPLLKH"
     gene            1011..>1822
                     /locus_tag="VIC30_05350"
     CDS             1011..>1822
                     /locus_tag="VIC30_05350"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803843.1"
                     /translation="MRLTSPALAPILGLGQICSWGTLYYSFPLIALQMEAELGWSKSE
                     LYAGATLGLAMTALLSYPVGAGIDRGFGKWIMGGASLAALGVMGWWSVTDHLLAFYVI
                     CALSGAIQAAVLYEPAFAVLARHVGAPNARRGITHITLWGGFASTVFIPITELLISTL
                     DWRTTLLWLGAVNFVFGLVYLWVIQPEHDVSHAHTPAQKQADATRDRLIVRENLNNSL
                     FWLVLGSLTVYAGMFSAFTFHMYPLLQEQGLNERDVVLAIAIIGPAQVLGRYL"
BASE COUNT          393 a          468 c          509 g          452 t
ORIGIN      
        1 tgggtgtatc tggctctggc aagtcaacgt ttgcccgcga ggtgttgctg gacaatctag
       61 ccaatgccgt tggcatcgga gaaccagaaa aatggtttgg ctgtcagtct attgaagact
      121 ggcaatacat cgatcgcgtg ctcgaagttg accagacccc aatcggtaaa acaccccgtt
      181 catgcccggc aacctacatc ggtttctggg acgacattcg caaacaattt gccaacacac
      241 aagaagctcg tatgcgtggc tggaaaacca atcgtttctc ctttaacacc ggcgacggcc
      301 gttgtccggt ctgcgaaggg caaggcatgc gtacggtgga aatgagtttc ttacctgacg
      361 tcaaagtacc ttgtgatgcc tgtcatggtg accgcttcaa tgcagataca ttaagcgcgc
      421 gtttgcgagg caagcatgtc ggtgaagtgt tgtccatgga agtcgatgag gctgttgagt
      481 tctttgctgc tcacccaaag gtggctcatc cacttaagct tatgcaagac gttggcctcg
      541 gttacttgac gcttggccaa ccctcaccga cgctatctgg tggcgaggcg caacgcatca
      601 agctggtgac ggagttagcc aaagcgaaag tcaccgatgg catcattaaa accgggcgtg
      661 cctcccgatt gccgcacaca ctttacgtac tcgatgagcc gactgttgga ctttccatgg
      721 ccgatgtaga aaagttaatc catgttctgc atcgcttgac cgacgctggc aatacagtgg
      781 tagttatcga acacaaccta gacgttatcg ctgaagccga ctgggtggtg gatctgggtc
      841 ctgaaggcgg cagtcaaggt ggtcgattgg ttgcccaagg ttcgcccgac gtgttaatcc
      901 gtaagcatct aaaacaatca cacacggcac aggccttaaa accgctgctt aagcattaac
      961 atcgttcacc tggatacctt ttgcactgac accagttaca ccaccactta atgcgtttaa
     1021 cgtcaccggc gcttgcgccc attctcggtt taggtcagat ttgctcctgg ggcacgctct
     1081 actacagctt tccattgatt gccttacaaa tggaagcaga gctgggctgg agcaagtctg
     1141 aactctacgc cggtgccacg ctaggactgg cgatgacagc gcttctgagc tatccggtcg
     1201 gtgcgggcat agaccggggt tttggtaagt ggatcatggg tggggcctcg cttgccgcgt
     1261 tgggtgtgat gggctggtgg tctgtcacag atcatttatt ggcgttttat gtcatctgtg
     1321 cactcagtgg cgccatacag gcggcagtgc tctatgagcc ggctttcgcg gtactcgcgc
     1381 gacacgttgg agcgccgaat gcacggcgcg gcattaccca catcacgctt tggggtggat
     1441 ttgccagcac ggtatttatc ccgatcaccg agttgctcat ctcaacgctg gattggcgta
     1501 ccacgctgct gtggttgggc gcagtgaact ttgtgttcgg tctggtgtat ttgtgggtta
     1561 ttcaacctga gcatgatgtg agtcatgccc acacgcctgc gcaaaaacaa gccgacgcaa
     1621 cgcgagatcg gctgatcgtg cgcgagaacc taaacaacag tctgttctgg ttggtgctgg
     1681 gatccttgac cgtgtatgcc ggcatgttct ctgcatttac gtttcacatg tatccgctgc
     1741 tgcaagaaca agggcttaat gaaagggatg tggtgttggc catcgccatc atcggtccgg
     1801 cgcaagtgct cgggcgttat ct
//
LOCUS       DATBNL010000319         2371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143407, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000319 DATBNL010000000
VERSION     DATBNL010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143407"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VIC30_05355"
     CDS             <1..430
                     /locus_tag="VIC30_05355"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY7803844.1"
                     /translation="DCDIVVASTEAKFTCSFNKIGLLPDLGGLWSIPARMGLGRAKLM
                     MLTGRTLDATSAQAQGLVEELCEPGQALETAVKLAQEIAQCAPLTHGMTKAALARGSM
                     SVDELLALEVDLQGLLFGTEDFQEGRQAFLDKRKPVFQGK"
     gene            576..989
                     /locus_tag="VIC30_05360"
     CDS             576..989
                     /locus_tag="VIC30_05360"
                     /inference="COORDINATES: protein motif:HMM:NF027482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4864 domain-containing protein"
                     /protein_id="HEY7803845.1"
                     /translation="MKIATWLASVCIGLVVGSAQAEPTRNADIEKVIDQQMAAFQADD
                     FKAAFEFAAPNIQKKFGTPEKFAFTVIHAYPMVWRPTDVQYIGVEQYSGQSLQKVMIT
                     DRNQTLHVLVYQMLPLDQGWRIGGVQIIRQPKSDT"
     gene            1101..1865
                     /locus_tag="VIC30_05365"
     CDS             1101..1865
                     /locus_tag="VIC30_05365"
                     /EC_number="4.1.3.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HEY7803846.1"
                     /translation="MDKPTTELCAHTLTSMNYRDQDLVEDLLCKRTFSEVMFMQIMAR
                     EPRAVDMRILDAVLITLMEHGLTPSAIATRMIYMSAPENLQGAVSAGLLAVGSQFVGT
                     MENNARLLDQIIAADDQAAKAREIVLEMKASKAHLPGFGHHLHKPDDPRSMKLLALAE
                     AESELPGTHVKALRLLSQTIDDIYGKHITINATGATAALLGEIGVPSTLMRGFAVISR
                     AAGLVSHIAEEQKSPAGRYIWDKIDHDIPYVKTPLK"
     gene            complement(1964..>2371)
                     /locus_tag="VIC30_05370"
     CDS             complement(1964..>2371)
                     /locus_tag="VIC30_05370"
                     /inference="COORDINATES: protein motif:HMM:NF023197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 family protein"
                     /protein_id="HEY7803847.1"
                     /translation="EQTLYQVRQKITDSIRTAVAKQAKVVTRPGPDVANVSIAITGAQ
                     TLSDGFKPTDLIPVRAVLNVASKATGLDSKNALLVVEAKVNDSQSGELIGQALYTVSG
                     ESFRMESSSVEAFEKLADKWVKTALRVAAGRQP"
BASE COUNT          582 a          674 c          613 g          502 t
ORIGIN      
        1 agactgcgac atcgtggtgg cctctactga agcgaaattc acctgctcgt ttaacaagat
       61 cggcttgcta cctgacttgg gtggcctatg gtccattcca gcacgcatgg ggcttggccg
      121 cgccaaactg atgatgctca ccggtcgcac gctagacgcc actagcgcac aggcgcaagg
      181 tctggttgaa gaactatgtg agccaggcca ggcacttgag acggctgtca aactcgctca
      241 ggaaattgcc caatgtgcac ccttgaccca tggcatgacc aaagccgcgc tagcccgcgg
      301 ttcaatgagc gtcgatgagt tactggcact cgaagtagac ctgcaagggc tgttgtttgg
      361 caccgaggac ttccaagaag gccgtcaagc gtttctggac aaacgcaaac ctgtgttcca
      421 aggcaaatag ttgcttacag cacagtcgca acgcagtcgc ttgccggcca tcggcgcatt
      481 ctgctgtcat ggatatcccc agtggcggca gggtatcacc atcggtgatg atcattcgtg
      541 tgtacaacca aaaaacacac caaacgggga tcgccatgaa aatcgcaact tggctggctt
      601 ctgtctgcat cggattagtg gttggtagtg cgcaggccga acccacacgt aacgccgaca
      661 tagaaaaagt cattgatcag caaatggctg catttcaggc cgatgacttt aaagccgcct
      721 ttgaatttgc agcacccaac attcaaaaaa aatttggcac gcccgagaag tttgccttca
      781 ccgtcatcca cgcctatccc atggtctggc gacccaccga cgtgcaatac atcggggtcg
      841 agcaatacag tggtcaatcg ttgcaaaagg tcatgatcac cgaccgcaac cagacgctgc
      901 atgtgttggt gtaccaaatg ttgccacttg atcaaggttg gcgcatcggg ggtgtgcaga
      961 ttattcgcca gcccaagtcc gatacgtagt tgcacggtca caaagtcgca cagtcaacaa
     1021 gtcgcacagt cacaccagcc ataccccggg gtgcgccggg atgctacaac ttccaacata
     1081 ccttttgttg gagagaggcg atggacaagc ccaccaccga gctttgtgcg cacacgctca
     1141 caagcatgaa ctaccgcgac caagacctcg ttgaagactt gctctgcaaa cggaccttct
     1201 ccgaagtgat gttcatgcag atcatggccc gagagccacg tgccgtcgac atgcgcattc
     1261 tcgatgctgt gctcatcaca ttgatggagc atggcttgac gccaagcgcc atcgccactc
     1321 gcatgatcta catgagcgca cctgagaacc tgcaaggggc cgtgtcagct ggactgctag
     1381 ctgtgggcag ccaattcgtt ggcaccatgg agaacaatgc tcgattgctc gaccagatca
     1441 ttgccgcaga cgatcaagcc gccaaagcac gcgaaatcgt gcttgagatg aaggcatcga
     1501 aggcccactt gccagggttt ggccatcact tacacaaacc ggatgacccc agaagcatga
     1561 agttgctggc attggctgag gctgaaagtg aattgcctgg cacccacgtc aaggccctgc
     1621 gtctgctgtc acaaaccatt gacgacattt acggcaagca catcacgatt aacgccacgg
     1681 gtgccacggc cgctttactc ggtgaaatcg gcgtgccatc aacactcatg cgcgggtttg
     1741 cggtgatttc acgcgctgca ggtctggtct ctcacatcgc agaggagcag aaatcgccgg
     1801 ccggacgcta catctgggac aagatcgatc acgacatccc ttacgtgaag acaccgctta
     1861 aatgatgacg tagaaagggc agcccgagct gccctttcta ctttctatat caaacgaaac
     1921 gcaaattagc tacctactac agcagctatc tagacgcagc aaactatggc tgacggccag
     1981 ctgccacacg cagtgctgtc ttgacccact tgtcagctaa cttctcgaat gcctcgactg
     2041 acgaggactc catgcggaag gactcacccg agacggtgta gagagcctga ccaatcagct
     2101 cacccgattg actgtcgttg accttggctt cgaccacgag caaagcattc tttgaatcca
     2161 agcctgtggc tttgctagcc acattcaaca cggctctcac gggaatcaag tcggttggtt
     2221 taaaaccatc agacagcgtt tgggcacctg tgatagcgat gctgacattg gcgacatctg
     2281 gaccaggtcg ggtgacaact ttggcttgtt tagccaccgc ggtacggatg ctgtctgtga
     2341 tcttctggcg cacctgatac aacgtctgtt c
//
LOCUS       DATBNL010000320         2549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_63654, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000320 DATBNL010000000
VERSION     DATBNL010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63654"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /gene="pagP"
                     /locus_tag="VIC30_05375"
     CDS             complement(<1..527)
                     /gene="pagP"
                     /locus_tag="VIC30_05375"
                     /EC_number="2.3.1.251"
                     /inference="COORDINATES: protein motif:HMM:NF008271.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) palmitoyltransferase PagP"
                     /protein_id="HEY7803848.1"
                     /translation="MALKTPTTCRTLAATAILATSSAAAASTGSTSSTLGAWFDTASE
                     HVSDTWHEGDTELYVPIWTFHHRGTYDDDHIEDFNEFPAGIGLGKGRYNSSGNWEGMY
                     AMGFMDSHNEPSFMAGYAWVPTWELGNEVKAGVGVTGFLMSRSNYWNGIPFPGVLPIA
                     SIGYKQLSLQAAYIP"
     gene            complement(769..1332)
                     /locus_tag="VIC30_05380"
     CDS             complement(769..1332)
                     /locus_tag="VIC30_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEY7803849.1"
                     /translation="MSSPTHVTITGYPSHLLNAAALAGICLSLLIAFFLQIFNGEIPC
                     PLCMLQRVGLMMVGFGFFLNVRFGPSAIHYAIIILSAMIGASVSLRQDLLHIIPGTGG
                     YGSTIFGYHLYTWGFISFMAVIIFTAIMLVVDRNRLSGNNIQSATWIATALGTLLVLL
                     GLGNLLSNILVCGFSICSGDPKGYLFF"
     gene            complement(1340..1489)
                     /locus_tag="VIC30_05385"
     CDS             complement(1340..1489)
                     /locus_tag="VIC30_05385"
                     /inference="COORDINATES: protein motif:HMM:NF039621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5993 family protein"
                     /protein_id="HEY7803850.1"
                     /translation="MPSVLLTLFGTYMATRGSRKIALVCWVLAILAMLGAMSYHMDDS
                     LNIDL"
     gene            1855..>2549
                     /locus_tag="VIC30_05390"
     CDS             1855..>2549
                     /locus_tag="VIC30_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEY7803851.1"
                     /translation="MTSPNKTSIRIGAGSAWWGDRVEPAALSAEKGQLDYLCFETMAE
                     ATISAAQVRSRRDPSFAGYDTYLDDRMRAVLPHCIPQGTRIISNQGWINPDAAAKRAI
                     ELLADMGFHGVKVASINGSLITERVLQLTDKILENGQSTSTLESTMVSAEVYMGAEPI
                     VQALRDGAQIVFTGRVADPSLFVAPMMYEFGWDALDHDKVGAGSAIGHLLECGAQATG
                     GYFSDPGFKDVPRP"
BASE COUNT          638 a          648 c          733 g          530 t
ORIGIN      
        1 cttgggatat aggcagcctg tagtgacagt tgcttatagc caatggaagc aatgggtaac
       61 acgccaggaa acgggatacc gttccagtag ttactgcgtg acattaaaaa cccggttaca
      121 cccacaccgg ctttgacctc attgcccagc tcccaggtag gcacccacgc atagcccgcc
      181 atgaaagacg gttcgttgtg tgagtccatg aagcccatgg cgtacatgcc ttcccagttg
      241 ccactgctgt tgtaacgacc cttgcctaaa ccgatacccg ccgggaactc gttgaaatcc
      301 tcgatgtggt cgtcatcata agtcccgcga tggtggaagg tccatatggg cacatacagc
      361 tcggtgtcac cttcatgcca ggtgtcactg acatgctcgc tcgccgtgtc gaaccaggcg
      421 cctagggttg aggacgtcga tcccgtggag gccgcagcgg cactcgaggt ggcgaggatg
      481 gcagtggcag ccaaagtgcg gcaggtcgtg ggggtcttca aggccatggc gtgattgcaa
      541 acttaaaggt ttagttacta acagcataac cgctgcacaa aaaagtgacc tgaaaaacgc
      601 atcactcagc tgtcagacca cggtagggca ggccagttcc gctgttgtta gcctacattg
      661 cttgaacctg ggttgcttta atcagtagtg cattgatggt gcatgactaa aacaacacgg
      721 cctgcggtgt atcccacgca ggccgtgtgt tgtcacatag gactcgcttc agaaaaagag
      781 gtagcccttg gggtcacccg agcaaatgga gaagccgcag accagaatgt tggacagcag
      841 attacccaaa cccagaagca ctaaaagggt gcccagtgcc gtggcgatcc aggtagcact
      901 ctggatgttg ttgccactta agcggttgcg atcgaccacc agcatgatcg ctgtgaagat
      961 gatgacggcc ataaacgaaa tgaagcccca ggtgtagagg tggtagccaa agatggtgga
     1021 gccgtaacca ccagtgcccg gaataatgtg cagtagatcc tgacgcagtg agacgctcgc
     1081 accaatcatg gctgacagga tgatgatcgc atagtgaatg gccgaaggac caaaccggac
     1141 atttaaaaag aacccaaaac caaccatcat gagcccaacg cgctgcaaca tgcaaagtgg
     1201 gcaggggatt tcaccgttaa aaatctgcag aaaaaatgca atcaacagtg acaaacaaat
     1261 gcctgccaag gcggccgcgt taagcaaatg agacgggtaa ccggtaattg tgacgtgggt
     1321 aggactgctc atgtttgcct cacagatcga tgttaaggga atcgtccatg tgataggaca
     1381 tcgcgccgag catggccagt atggccagaa cccagcatac caaggcgatc ttgcgtgagc
     1441 cgcgcgtggc catgtaggtg ccaaatagcg ttagtaggac tgagggcatg attagcatcg
     1501 gtggttttct cccttgtttg acgtcattat tattgcgatg tgtgaactgt agcttacgga
     1561 gtgtgcccga tcaatatgac aattgtcaca tgacttggtt gtgacattgg cttgaaccgg
     1621 ttgtgctgtc ggtttgccaa attggttcgc taaacctcaa atctgtgaac agcgctgtca
     1681 aggatgacga accgcgagac agatccgtta tcaaatcacg gcagcagact cgccgagacc
     1741 ggcgcggggt gcgtacactg actcaaacta gcactgaatc catgccaaat caaaacaaat
     1801 caagccaaat catcagtcag tgtggggggg agatatatgc aacgagcggc gcaggtgaca
     1861 tcacctaaca aaacgtctat tcggattggc gcgggatcgg cctggtgggg cgatcgcgtt
     1921 gagccagcgg cactcagtgc agagaaaggt caactggact acctgtgttt cgaaaccatg
     1981 gcagaagcca cgatctcggc cgcacaggta cgcagccgac gcgaccctag ctttgctggg
     2041 tatgacacct accttgacga tcgcatgcgg gctgtgttgc cgcactgcat accgcagggc
     2101 acgcgcatta tttccaacca gggctggatc aacccggatg cggcagccaa gcgcgcgatc
     2161 gaattgctgg ccgacatggg gtttcatggg gtcaaggtgg cgtcaatcaa tggcagcctg
     2221 attaccgagc gtgtgctgca gttaaccgac aagatcctag agaacggtca aagtacaagc
     2281 acgctagagt cgaccatggt gtctgccgaa gtctatatgg gcgccgagcc cattgttcag
     2341 gccttgcgag acggtgcgca gattgtgttt acgggtcgcg tggcagaccc ctcgctcttt
     2401 gtggcgccca tgatgtacga gtttggttgg gatgcacttg accacgacaa agtcggtgct
     2461 ggcagtgcca ttggacattt gctggaatgc ggggcgcagg ccacgggcgg ctacttctct
     2521 gacccggggt ttaaagatgt gccacggcc
//
LOCUS       DATBNL010000321         2921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_14016, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000321 DATBNL010000000
VERSION     DATBNL010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14016"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VIC30_05395"
     CDS             <1..409
                     /locus_tag="VIC30_05395"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY7803852.1"
                     /translation="LCKQITVRQIRQLRSHLVAERRALKREDVAQRTQLLGEFHLVLA
                     RMHGNTVLHDTLGELMLRCSLIALAYQSPQSAQASHAEHVALVDALEKREAATAVRLM
                     KGHLQHVHHNIDVDHRNLESEQTLANALAGLTD"
     gene            431..1393
                     /gene="puuE"
                     /locus_tag="VIC30_05400"
     CDS             431..1393
                     /gene="puuE"
                     /locus_tag="VIC30_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009552474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase PuuE"
                     /protein_id="HEY7803853.1"
                     /translation="MNTSVRNPTHYPRDLIGYGRHRPDAKWPGGARVALQFVLNYEEG
                     AENTVLHGDAGSEQFLSELFNPTAYAARHLSMESIYEYGSRIGVWRVLREFEQRALPL
                     TVFGVGMALERHPDVAQAFIEAQHEIACHGWRWIHYQDADEATEREHMRQGMQAIENL
                     TGQRPLGWYTGRDSPNTRRLVADFGGFEYDSDYYGDDLPFWLNVKKSDGDFSPQLVVP
                     YTLDCNDMRFAMPQGFSDGDEFFTYLRDAFDVHYAEGATQPSMMSIGLHCRLIGRPGR
                     FRALQRFLDHIERHQQVWVTRRIDIARHWKTAHPFDANTAFNWM"
     gene            1438..2691
                     /locus_tag="VIC30_05405"
     CDS             1438..2691
                     /locus_tag="VIC30_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011482370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HEY7803854.1"
                     /translation="MPNDTLHQKLDAWVDAHFDEQVRFLQELVRVPTDTPPGNNAPHA
                     EHTAELLTRMGLPPEKHSVPADEVNAYGLQSITNLIVRRHYAEGPTIALNAHGDVVPP
                     GEGWTYDPYGAEIVDGKMYGRATAVSKSDFATFTYALRALESLGVPLKGQLELHFTYD
                     EEFGGEMGPGWLLRQGLTKPELMIAAGFSYEVVTAHNGCLQFEVTVEGDMAHAAIPDS
                     GTDALQGAVHILNALYRLNHEYLNITSKVDGITHPYLNIGQISGGTNTNVLPGKVIFK
                     LDRRMIPEEDSAAVETAIRQTINEAAAGFAPARGGTQLKVSIRRLLLANAMAPLEGNK
                     PLVNSLQHNAEEVFGEPIKAIGTPLYTDVRLYVETGVPGVIYGAGPRTVLESNAKRAD
                     EHLVLEDLRRATKVVARTLADLLIN"
     gene            2703..>2921
                     /locus_tag="VIC30_05410"
     CDS             2703..>2921
                     /locus_tag="VIC30_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803855.1"
                     /translation="MNQTLPAGAQVFDKHAADYDAWFDSPKGRALFELELKVLRALKP
                     NTDSWLEIGTGSGRFAQALGIEYGAEPSP"
BASE COUNT          697 a          812 c          783 g          629 t
ORIGIN      
        1 gctttgtaaa caaataaccg tgcgacaaat acgtcagtta cgctcgcatc tcgtggctga
       61 gcgacgggcc ctaaagcgcg aagatgtcgc ccaacgcacg caacttcttg gtgagtttca
      121 cttagttctc gccaggatgc atggcaatac cgtgttgcat gacacgctcg gcgagctaat
      181 gctgcgatgc tcactgattg cactggccta tcagtcaccg caatcagcac aagcgtcaca
      241 cgctgaacat gttgcattgg tagacgcgct cgaaaagcgc gaggcagcaa ctgccgttcg
      301 cctgatgaaa ggccatctgc aacatgtgca tcacaacatt gatgtcgacc accgcaatct
      361 tgagtccgaa caaacactgg ccaatgcctt ggctggccta accgattaac gtctacgaca
      421 ggtaaccacg atgaatacca gcgtccgcaa tccaacgcat tatccacgtg acctaatcgg
      481 ctatggccga caccgacctg atgcaaaatg gccgggcggc gcgcgcgtag ccctgcaatt
      541 tgtcttgaac tatgaagaag gcgcagaaaa caccgtcctg cacggcgacg ctggcagcga
      601 acaatttcta tctgaactct ttaatcccac agcctacgcc gcccgccatt tgtcgatgga
      661 gagcatctac gaatatggtt cacgcatcgg tgtctggcgt gtgctacggg aattcgagca
      721 acgcgcgctg ccactgacgg tttttggggt tggcatggcg cttgagcggc accctgatgt
      781 tgcacaggcg tttatagaag cccagcatga aatcgcctgc catggctggc gctggattca
      841 ctaccaagat gctgatgaag ccactgagcg cgagcacatg cgccaaggca tgcaggccat
      901 cgagaacttg acggggcagc gcccgttggg ctggtacacc ggacgagaca gtcccaacac
      961 gcgtcgcttg gttgctgatt ttggggggtt tgaatacgac agtgactact acggtgacga
     1021 cttgccgttt tggttaaacg tcaaaaagtc agatggtgat ttctcacctc aattggttgt
     1081 gccttacacc ctagactgca atgacatgcg atttgccatg ccgcagggat ttagtgacgg
     1141 cgatgagttc tttacctatt tacgcgatgc ctttgacgtg cattacgccg aaggcgccac
     1201 acaaccgagc atgatgagca taggcctgca ctgtcggctc attggacgcc cgggacgatt
     1261 tcgggcactg caacggtttc ttgatcacat tgagcgccat cagcaggttt gggtgacacg
     1321 acgcattgac attgcacgtc actggaagac cgctcacccc tttgatgcaa acaccgcatt
     1381 taactggatg taagccctgc aagacctaat tttaaaaaca caccaaccgg agacaccatg
     1441 cccaacgaca cgcttcacca gaaactagac gcctgggttg acgctcattt tgatgagcag
     1501 gtgcggtttt tacaggaact ggtgcgtgtg cccactgata ccccgccggg taacaatgca
     1561 cctcacgctg agcacaccgc cgagttgctg acccgcatgg gcttaccccc agaaaagcat
     1621 tctgttccgg ctgatgaggt caatgcttat gggctgcaat cgattacgaa cttgattgtt
     1681 aggcgtcatt acgcagaagg accaaccatt gctttaaatg cacacggtga tgtcgtaccg
     1741 ccgggcgaag gctggacgta cgatccctat ggcgctgaga ttgtcgatgg caagatgtat
     1801 gggcgcgcca ccgctgtgag caagagcgat ttcgcaacct ttacctatgc gcttcgtgcc
     1861 ctggagtcgc tcggtgtgcc gctgaaaggc cagcttgagc tgcactttac ttacgatgaa
     1921 gagttcggcg gtgagatggg acctggctgg ttattacggc agggacttac caaaccagaa
     1981 ctcatgattg cagctgggtt tagttacgaa gtggttaccg ctcacaacgg ttgtctgcaa
     2041 ttcgaagtca cagtcgaagg cgacatggca catgcggcca ttccagatag cggcaccgat
     2101 gccctgcaag gtgccgtgca catccttaat gcgctgtacc gactaaacca cgagtatctg
     2161 aatatcacct ccaaagtaga cggcatcacc cacccctact taaacatcgg ccaaatctct
     2221 ggaggcacca acaccaacgt gctgccgggc aaggtgatat ttaaactcga caggcgcatg
     2281 atcccggaag aggactcggc cgccgtcgaa accgccatta gacaaaccat caacgaagcg
     2341 gccgccggct tcgcacccgc gcgtggtggc acgcaattaa aggtcagcat tcgccgtctg
     2401 ctactagcca acgccatggc gccacttgag ggcaacaagc ctttggtcaa ctccttgcaa
     2461 cacaatgctg aggaagtgtt tggtgaaccg attaaagcca ttggcacgcc gctctacacc
     2521 gatgtgcgtt tgtacgttga gactggcgtg cccggcgtga tctacggcgc cggtccgcgc
     2581 accgtattgg agagcaacgc caagcgcgct gacgaacatc tggtgcttga agacttgcgc
     2641 cgcgccacca aagtggtcgc tcgcaccttg gctgacttgt taatcaatta ggggtgtgca
     2701 ccgtgaacca aacactaccg gctggtgctc aagtattcga caagcatgct gcagactatg
     2761 acgcatggtt tgatagccca aagggtagag ccctgttcga gttggagctt aaagtcttgc
     2821 gagcactcaa acctaacacg gactcgtggc tcgagattgg caccggtagc gggcgctttg
     2881 cacaggcttt agggattgaa tatggtgccg aaccgtcacc t
//
LOCUS       DATBNL010000322         1890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_182412, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000322 DATBNL010000000
VERSION     DATBNL010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182412"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..730
                     /locus_tag="VIC30_05415"
                     /pseudo
     CDS             145..730
                     /locus_tag="VIC30_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006759112.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(802..1803)
                     /locus_tag="VIC30_05420"
     CDS             complement(802..1803)
                     /locus_tag="VIC30_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011518937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7803856.1"
                     /translation="MNDQKNAPKNTPNTDPTTANQTVKRPTVLACVDQSPYATYVTDY
                     AAWAAKRLNTGLELLHVIDRNPELGPDQDHSGAIGFNEQENLLKKIVDEDEQRSRLAR
                     ETGRVFLNELKQRAENQTNQANQPGQTDQTDQADQTDYSDHPTLHVDMRQRHGSLVDS
                     LLERQDQTTLVVMGRRGASSATTNRDLGRNLESVVRTMKCPILSVTDAFKVPTHLMIA
                     YDAGSASRKGLDMVATSPAFQGIKCSVVMVKDKESKDAPRQLAQAKTKLSDAGLDVDT
                     HLLIGDFEGLMAKSIQTLGIDLLVMGAYTHSPWRSLFMGSHTTDLLRAASVPTLLLR"
BASE COUNT          428 a          465 c          520 g          477 t
ORIGIN      
        1 acagtttttg ccagatcgat gccaactgtc gtaatcttca tggtggacgc cctcctgtag
       61 cgtagtgttt gagttaacac cctcacttta aggcactctg atgccgtagc atcaggtcgg
      121 ggcgtccatt ccattgtttg accaagaaag tggcgtttgc aagtgaagtt ctctgccaac
      181 tggaaaaagc agaaaaagaa gatagttcgt ttgtatgaac gcatcgccaa cgcgagacat
      241 gatttcttgc acaaagcctc aacactgatc agcaaaaacc acgccatggt tgttgttgag
      301 gacttgaagg tcagaaacat gtcgaaatcc gccaaaggcg acttggccaa tccgggtcga
      361 aacgtgaaag ccaagtcagg cttaaaccga tcgatcctgg atcaaggctg ggaagcgttt
      421 gttaaaccgg tttgtacaaa tgcttcaata caagcaaact tggttgggtg gcgaggtgat
      481 tcaggtagat cctcaacaca cctcgcagac ctgcccagaa tgccaccatg tcagcaaaga
      541 caaccgcacc tcacaatcaa gatttaaatg tgttgcatgc ggttatacgg aaaacgctga
      601 cttggtgggt gcgttaaatg tactagcccg agggcatcgg gttctcgcct gtggagttga
      661 aacgttggtt ttaacgatga agcaggaacc attgggaagt agcgatacac gcccaatctt
      721 ggcggcttga taaagccgct aggaatcctc gtcgttcagg acggggagga cgtcaacacc
      781 agcattgata accactacca ctcaccgcag caacaacgtc ggcacgctcg ccgctcttag
      841 caaatcggtg gtgtgactgc ccatgaacag tgaacgccaa ggtgaatggg tgtatgcacc
      901 catcaccaag agatcaatgc cgagcgtctg aatgctttta gccatcagcc cctcaaaatc
      961 accaatcaac aaatgggtgt cgacgtcaag gcccgcgtca ctgagtttgg ttttagcttg
     1021 cgctaactgc cttggggcat ccttagactc tttgtctttg accatcacga ctgaacactt
     1081 gatgccttga aacgccgggc tagtggccac catgtccaag cctttgcggc tggcactgcc
     1141 tgcatcgtaa gcaatcatca aatgcgtagg taccttgaac gcatcggtga ccgacaagat
     1201 aggacatttc atggttcgca ccacgctctc gaggttacgc ccaaggtcac ggttcgtggt
     1261 cgctgatgag gcaccgcgtc tgcccatgac cacgagcgtg gtctggtctt ggcgctcgag
     1321 caaactatca acgagcgaac catgacgttg gcgcatgtcc acgtgtaggg ttgggtggtc
     1381 ggagtagtcg gtctggtcgg cttggtcggt ttggtcggtt tggccgggct ggttggcttg
     1441 attggtttgg ttctcagctc gttgcttcag ttcatttaag aacacccgcc cggtctcacg
     1501 agccagacgg ctgcgttgtt cgtcttcgtc gacgatcttt ttaagcaggt tttcttgttc
     1561 gttaaaacca atcgcaccgc tgtgatcttg gtcaggaccc agctcagggt tgcggtcaat
     1621 gacgtgtagc agttctaggc cagtgtttaa tcgtttggca gcccaggcag cgtagtcagt
     1681 gacataggtg gcatagggtg actgatctac gcaggccagc acggtggggc gtttcacagt
     1741 ctggtttgcc gtggttgggt cggtgtttgg ggtgttcttt ggggcgttct tttggtcatt
     1801 catttgatta ttcatggcat caatcggttt gttcgcaggt tagcggtact tgttagcggt
     1861 gcttgtcagt gcagcccctc agtgcagcgc
//
LOCUS       DATBNL010000323         2323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_63699, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000323 DATBNL010000000
VERSION     DATBNL010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63699"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VIC30_05425"
     CDS             complement(<1..304)
                     /locus_tag="VIC30_05425"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HEY7803857.1"
                     /translation="MMTDKIKIFPLDNKKAPGVPKGTDWRSWDKGADTPVYGLMIPKG
                     VYIIDLDTYKGVTTEQADAAIGAPLAWSEAALQRTMSGGTHYAFRVPDSADLTNGAN"
     gene            complement(285..479)
                     /locus_tag="VIC30_05430"
     CDS             complement(285..479)
                     /locus_tag="VIC30_05430"
                     /inference="COORDINATES: protein motif:HMM:NF025900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/CI family transcriptional regulator"
                     /protein_id="HEY7803858.1"
                     /translation="MEEIIGYFGSRAELARLLDVDRAAVAQWLRYGLPPARAIEIERL
                     SEGRFKASDIVGAKHDDGQN"
     gene            572..877
                     /locus_tag="VIC30_05435"
     CDS             572..877
                     /locus_tag="VIC30_05435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803859.1"
                     /translation="MLETKIEKLTDAIERLIVALDSAPTTTQATPVEPAKDAAPEQTG
                     DISKDDLQAWALTKVREDKSFKVLLMEQLSAKGAKTISQLPDNAAAQEVYVALGGEA"
     gene            874..2001
                     /locus_tag="VIC30_05440"
     CDS             874..2001
                     /locus_tag="VIC30_05440"
                     /inference="COORDINATES: protein motif:HMM:NF022379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HEY7803860.1"
                     /translation="MTAHAKLSASGSARWLNCAGSVAAEATIPSANKGGFYASEGSTA
                     HELADICLTEGKSPFDFEGQTLPENNAVTVDREMCNAVQDYMDYVATVPGVHEYEQRV
                     DFSDWVPEGFGTSDVISVDGDTIYIVDLKYGKGVRVDAEDNTQMMLYALGAYSEQSLL
                     HELKTVKMAIVQPRLDHISEATITVEALLKWAEWVAERAEEAISKDAERTPGEKQCQW
                     CAAKATCPALDAYTRRIVSADFDDLSNPDTLPDDRVREVLDAKKLITGWLDAVEKHVV
                     ERLESGQDFPGYKLVAGRSLRQWEDEKTAETKLVELLDTDAYERKLLTPAKAEKVLGK
                     KKAVEIADLIVKPEGKPTLAPESDKRPAVNVTANDFEACKT"
     gene            2062..>2323
                     /locus_tag="VIC30_05445"
     CDS             2062..>2323
                     /locus_tag="VIC30_05445"
                     /inference="COORDINATES: protein motif:HMM:NF022444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ssDNA-binding protein"
                     /protein_id="HEY7803861.1"
                     /translation="MKIKLQNVRLSFPSLFRKAVFSGEETKYEATLLINKETQADLIK
                     QIGDAIKEKIKVDLKGAKLPADKICMKDGENIEYDGYAGHWSI"
BASE COUNT          579 a          613 c          667 g          464 t
ORIGIN      
        1 cgttggcgcc attggtgagg tctgcgctgt cgggcactcg gaaagcgtag tgggtgcctc
       61 cggacatggt acgttgcaat gcggcctctg accacgcaag gggtgcgcca atggcggcgt
      121 ccgcctgttc ggtggtcaca cctttatagg tgtcgaggtc gataatatag acgcctttgg
      181 ggatcatcag gccatagacc ggcgtgtccg cccctttgtc ccagctgcgc cagtctgtgc
      241 cttttggtac accgggcgcc tttttgttgt caagcgggaa aatcttaatt ttgtccgtca
      301 tcatgcttgg ccccaactat atcagatgct ttaaagcggc cttcactcag gcgctcgatt
      361 tctatggccc tagcgggggg caagccgtaa cgcaaccact gggcaaccgc cgccctatcc
      421 acatccaaaa gccgggcaag ctccgctcga ctgccaaaat acccgatgat ttcttccacg
      481 ttgtcgcctc ttttgttaag caatgcttta cagcatacac ggtttgcgct aggatgttaa
      541 gcgtaactta actgaaaaag ggtacaacaa aatgctggaa actaaaattg aaaagctaac
      601 cgacgccatc gaacgcctga tcgtggcgct tgattctgcc ccgacaacca cgcaggctac
      661 ccctgttgaa ccggccaagg acgccgcgcc agagcaaacc ggcgacatta gcaaagacga
      721 cttgcaagcc tgggcgctga ccaaggtgcg cgaggacaaa agcttcaagg tgctgctaat
      781 ggaacaattg tcggccaagg gggccaagac catcagccaa ttgcccgata acgccgccgc
      841 gcaagaggtg tatgtggcct tgggcggtga agcatgacag cccacgccaa gcttagcgcc
      901 agcggctcgg ctcgctggct gaattgtgcg ggcagtgttg cggctgaggc caccatacct
      961 agcgccaata aagggggctt ctacgccagc gagggttcaa cggcgcacga gcttgccgac
     1021 atctgtctga ctgagggcaa aagccccttt gattttgagg gtcaaacact gccggaaaac
     1081 aacgcggtca cggttgatcg cgagatgtgt aacgccgtgc aggactacat ggactatgtg
     1141 gccacagtgc ccggcgtgca tgagtacgag cagcgcgtgg attttagcga ctgggtgcca
     1201 gaagggttcg gcacctccga tgtgatcagc gttgacggcg ataccatcta tattgttgat
     1261 cttaagtatg ggaaaggcgt gcgcgtcgat gccgaggaca acacgcaaat gatgctgtat
     1321 gcgttgggtg cctattctga gcagtcgctg ttacatgagt tgaaaacagt gaagatggcc
     1381 attgtgcagc cgcgccttga ccatatcagc gaggccacaa taacggtcga agcgttgttg
     1441 aagtgggcgg agtgggtagc cgagcgggcc gaagaagcga taagcaaaga cgcggaacgc
     1501 acgccgggcg agaaacaatg ccaatggtgt gcggccaagg ccacctgccc cgcacttgac
     1561 gcctacaccc gccggatcgt gtcggcagac tttgacgatc ttagcaaccc tgacaccctg
     1621 cccgatgatc gcgtgcggga ggtgctggac gccaagaagt tgataactgg ctggctggac
     1681 gccgtggaaa agcacgttgt tgagcgccta gagtcgggtc aagacttccc cggttacaag
     1741 ctggtggctg gccggtcgct gcgccaatgg gaagacgaaa aaacggcaga aaccaaactg
     1801 gttgaattgt tggacaccga cgcctacgag cgcaagttgt tgacgccggc caaggccgag
     1861 aaggtactcg gcaagaaaaa ggcggttgaa attgccgacc ttattgtcaa gcccgagggc
     1921 aaacccacgc tggcgcctga gtcagataag cgcccagcgg ttaacgtgac ggccaatgac
     1981 ttcgaggctt gcaaaacgta aaccgttaag ctatgcttaa cactgccaat gttggcacca
     2041 caaacttaaa aggctttaaa catgaaaatt aaactgcaaa atgttcgact ctccttcccc
     2101 tctttgttcc gcaaagctgt gtttagcggt gaagaaacca agtacgaggc gacactgctg
     2161 atcaacaaag agacgcaggc cgatctgatc aaacagattg gtgatgcaat caaggaaaag
     2221 atcaaagttg acctcaaagg cgcaaagcta cctgccgata aaatctgcat gaaagacggt
     2281 gaaaatatcg agtatgacgg ctacgccggt cactggtcaa tca
//
LOCUS       DATBNL010000324         5821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143455, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000324 DATBNL010000000
VERSION     DATBNL010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5821
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143455"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VIC30_05450"
     CDS             complement(<1..403)
                     /locus_tag="VIC30_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803862.1"
                     /translation="MKTNFLMGCTLACMGMGASAQSAFEGFYGQASTGYEHTTVQDAQ
                     LTGTDFGSTPNLSNTVSPSFSGMPLILGVGYTWQVQDQFTFGLGIDYSFNSQKDTNAA
                     VFTYPSTGSSTGYDYQFSVSDRVNVYLTPGYA"
     gene            668..1276
                     /locus_tag="VIC30_05455"
     CDS             668..1276
                     /locus_tag="VIC30_05455"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803863.1"
                     /translation="MATEPSETVSQAREQLKFPSFPLVATLATQSLATMAAYSFPVVA
                     PVIADDLEVPGTLVGFFIAIVYGVGILSALLSPRFIRRFGAVRVSQLVLIATLAMLLA
                     CSIGSIVSAVLGAALLGLAYGATAPASAHLLVPRTPLRMMNLVLSIRQIGVPLGGVLA
                     GLVMAPLTLSLGWQAALLWQTLPVLVTVLLLESVRRQWDVDR"
     gene            1361..1885
                     /locus_tag="VIC30_05460"
     CDS             1361..1885
                     /locus_tag="VIC30_05460"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803864.1"
                     /translation="MSFVYTGLQLCFIAFLTVHLTSKTGFNLVQAGWALAMFQVAGVI
                     SRPIWGWLADRWCSANALLAWQGFIMGATALLTGQFAMDWEPWMVFGLCAVAGASASG
                     FTGLAYAEWARLGGAQRTEATGLGSGLMFAGVLLLPSLFSVVVTALDDYALTYGFVGA
                     LTALAGFLLLRSGK"
     gene            2156..3349
                     /locus_tag="VIC30_05465"
     CDS             2156..3349
                     /locus_tag="VIC30_05465"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7803865.1"
                     /translation="MIRHDDGESIALFEPLMISEGSPHRRHLNDLALELAEKSASFRS
                     SLPEPITQSLAELVRSMNCYYSNLIEGHDTHPIDIERALGDDYSADPDKRDLQLEAKA
                     HINVQKWIDEGGISEHPSSPAMILELHRRFCDLLPPGLLFIEHPTTKEPVPVIPGELR
                     TGYVEVGRHITISPGAVTRFLDRMHQAYRRAGRIEAILAAACAHHRLLWIHPFTDGNG
                     RVARLMSYAMLRKSLDTRGLWSVARGLARQEQTYKHQLASCDGSRHGDLDGRGNLSEK
                     ALAKFVTFFLQTCIDQVEFMARLMQPQRLRDRIMIWAEEEMRAGALPPKSDLVLNAVL
                     SQGKLERGGVDSILGMSPRSARRITSVLLEVGALTSQSSRAPLLLAFPAKFAGRWMPG
                     LFPDA"
     gene            complement(3411..3487)
                     /locus_tag="VIC30_05470"
     tRNA            complement(3411..3487)
                     /locus_tag="VIC30_05470"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3451..3453),aa:Met,seq:cat)
     gene            3688..4383
                     /locus_tag="VIC30_05475"
     CDS             3688..4383
                     /locus_tag="VIC30_05475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY7803866.1"
                     /translation="MTDTSAKPVRIWDLPTRLFHWLFATSVIGAVVTVKVGGSWMDWH
                     MPLGITALVLLAFRLIWGFTGSRYARFNSFFVSPKQTWAYLKTRPHVESAGHNPLGAW
                     SVFALLLVVGVQAFTGLFTTDDILVQGPLNQFVSGDVASLMTSIHKFNETPLFILVGL
                     HLVAILIYAIRGVKLVPAMVTGNKTEAELPANTRSARDDIGLRAWAFVLIVLLGSIGW
                     WLYELGQTAPMSF"
     gene            complement(4475..4927)
                     /locus_tag="VIC30_05480"
     CDS             complement(4475..4927)
                     /locus_tag="VIC30_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY7803867.1"
                     /translation="MKKSLLASLTFALAAPLLAANVHAQAFGKAQDAIDYREGAFQIM
                     KAHFGALQPVVKGQIPYDQAMVLANVEILDQVSKLPWKAFGPGTEGGDALDDIWLDEE
                     GFKAAQKKYLDSLVPLTAAAKEGNLDKLKAAFVDTGASCKACHDSFRD"
     gene            complement(4977..>5821)
                     /gene="purB"
                     /locus_tag="VIC30_05485"
     CDS             complement(4977..>5821)
                     /gene="purB"
                     /locus_tag="VIC30_05485"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEY7803868.1"
                     /translation="TPTTLGKEFANVSHRLARAIDAIEAVKPLAKLNGATGNYSAHLS
                     AYPDIDWPAFSAKVLAELGLTQNTHTIQIEPHDWMAELFDAIARANTILLDLDRDVWG
                     YISLGYFKQKLKEGEVGSSTMPHKVNPIDFENSEGNLGLANAMLRHLAEKLPVSRWQR
                     DLTDSTVLRNVGVALGYCVVAYEACAKGLGKLEVNAVVIDADLDECWEILAEPVQTVM
                     RRHGLPEPYEQLKALTRGKGITRDALQGFIAELDLPQVDKDRLLKMTPRNYLGLSKSL
                     AKQP"
BASE COUNT         1318 a         1546 c         1517 g         1440 t
ORIGIN      
        1 tggcatagcc gggtgtcagg tatacattca cgcgatctga cacagaaaac tgataatcgt
       61 atcccgttga tgagcctgtg ctcggatacg tgaacaccgc cgcgttggtg tccttttggc
      121 tattgaacga ataatcaatg cctaggccaa acgtaaattg gtcctgcact tgccaggtgt
      181 agcccacacc cagaatcaaa ggcatgccac tgaagcttgg gctaacggta ttgctcagat
      241 tgggggtcga cccaaaatcc gtaccagtca gttgcgcatc ttgcaccgtg gtgtgctcat
      301 agccagtcga cgcctgcccg tagaagcctt cgaatgcgct ttgggcactc gcgcccatac
      361 ccatgcacgc caaggtgcat cccatcaaga agtttgtttt catttgtcgg ccgctattgt
      421 gagaaggcgc ctaacagcag acaacggcag acgcgatcgt ggtgttgttt caagcttgcg
      481 catcagtcac gtatcaaaga ttgcaagcaa cgtttggact atagcaccgc acccaagctc
      541 aaggcgatag caactagcag ggcatgggcc acacaggcac tgattttttc tcatactatc
      601 gataggtgta agcaagataa gtctgtgaca gacatagaac actttcagca caggaacaga
      661 aatccctatg gccacagagc ctagcgagac cgtcagtcaa gcacgcgagc agcttaagtt
      721 cccgagtttc ccgttggtcg ctactttggc gacacaaagc ttggcgacaa tggcggcgta
      781 ttcgtttccc gtcgtagccc cggtgatcgc cgatgacctt gaggtacccg gcacattggt
      841 cggctttttt atcgctattg tctatggcgt cgggatttta tcggcgctgc tgtcgcctcg
      901 ctttattcga cgctttggtg ctgtcagagt cagtcaattg gtactcatcg caacactcgc
      961 aatgcttttg gcctgctcaa ttggcagcat tgtctcagct gtgcttgggg cagccttatt
     1021 agggctggcc tacggtgcga cagcgcccgc tagcgcacac ctgcttgtac cccgcacgcc
     1081 gctgcgcatg atgaacttgg tgctgtcgat tcgacaaatt ggcgtgccct tgggcggtgt
     1141 gctggctggg ctagtgatgg ccccactgac cttaagtcta gggtggcaag cggcattact
     1201 ttggcagaca ctgccagtat tggtcaccgt acttctattg gaatccgtgc gtcgccagtg
     1261 ggacgtggac cgataacctg gccagcggat cttaagcacc ggcctttttg cgcccgttca
     1321 aattctgttt gaccgacccg aactcaggcc cttggcgttt gtgagctttg tttataccgg
     1381 cttgcagctc tgtttcatcg cgtttttaac ggtgcatctc accagtaaaa ccggtttcaa
     1441 tctcgtgcaa gccggctggg ctttggccat gtttcaggtg gccggtgtga tcagccgtcc
     1501 catttgggga tggttagcag accgatggtg ctcggcaaat gctttgctgg catggcaagg
     1561 tttcatcatg ggtgcgacag ctttactcac cgggcagttc gccatggact gggaaccctg
     1621 gatggtgttt gggttgtgtg ccgtggctgg ggcttctgct agcggcttta ctggtctggc
     1681 ctatgccgag tgggcgcgcc taggcggtgc gcagcgaact gaggcgactg gcttgggatc
     1741 tggactgatg tttgccggtg tattgctatt gccgtcgttg ttctcagtgg ttgtgacagc
     1801 gttagatgat tacgcgctga cctacggctt tgtcggcgcc ttaaccgcat tggccggatt
     1861 tttactgctg cgctcgggca aatgatgcca atttgcgggg tgcggtcaag gtcattgcct
     1921 gataacccgg tcgcagcata ctcgcataac ctcacattga ccaaacaaac tcaacaagac
     1981 gaagatacgg ccaagtaacc gcacaaataa ccggacaaat aaccggacaa atacttgtcg
     2041 taataacgtc aacaaccaaa ctaaccttat gataatatac gatattatat atgtataaac
     2101 cagataaaaa accggctaaa aaaccggcca aaagccagcc acatcacagg caaatatgat
     2161 acggcatgac gatggtgaaa gtatcgctct ctttgagccc ttgatgatct ccgagggttc
     2221 gccccatcgt cgacatttaa acgatctagc gttggagttg gctgaaaagt cagcatcttt
     2281 ccgaagtagc ttgccagaac ccatcaccca atccctcgct gaacttgtac ggtcgatgaa
     2341 ctgctactac agcaatctga tcgaagggca cgatacgcat cctatcgata tcgaacgtgc
     2401 cttgggcgat gattacagcg ccgacccaga caagcgcgat ctgcagcttg aagcgaaagc
     2461 ccacatcaat gttcaaaaat ggattgatga aggcggcatt tcagaacatc caagctctcc
     2521 ggcgatgatt ctcgagcttc accgccggtt ttgcgatctc ctgccgcctg gccttctatt
     2581 tattgagcac cccacgacta aagaacccgt tccggttatt ccgggagagt tgcgtaccgg
     2641 ctatgttgag gtcggccgac acatcacaat tagccctggt gctgttacgc gctttttgga
     2701 tcgtatgcat caagcgtatc gccgcgcagg gcgcatagaa gcgattctgg ccgcggcatg
     2761 cgcccatcac cgacttcttt ggatccaccc ttttactgat ggcaatggcc gcgttgcgcg
     2821 tttgatgtcg tatgccatgt tacgaaagtc tctcgatacg cgggggctat ggtcggtcgc
     2881 ccgagggcta gcgcgacaag aacagaccta taaacaccag ctggcctcat gtgacggatc
     2941 gcgtcacggc gacctcgatg gtcgtggcaa cctaagtgaa aaagcgctgg caaaatttgt
     3001 gacattcttt ctacagacct gtattgatca ggtagagttc atggcccgcc tgatgcagcc
     3061 gcagcggctg cgtgatcgga tcatgatttg ggccgaagaa gaaatgcgcg cgggagcatt
     3121 gccgcctaaa tccgaccttg ttctcaatgc cgtgttgtct caaggaaagc tcgagcgcgg
     3181 tggtgttgac tccatcctcg gtatgagccc ccgctcagcg cggcgcatta cgtcggtctt
     3241 gctagaggtg ggcgcgctca catcgcaaag tagccgagcg cccttgcttc tcgcatttcc
     3301 tgcaaagttt gctgggcgct ggatgccggg tctttttcct gacgcctgat gcacgactgc
     3361 tcagacgctg ccgcgaaggc acgatgtctc gagtatgtac cttgaatttt tggtggcgca
     3421 tcagggattc gaaccccgga cctgcggatt atgattccgt cgctctaacc aactgagcta
     3481 atgcgccgat gaggaaatgc actgtgacga tcgtttagag cagcgaatga aacatttact
     3541 aaagccaaca actgctaaaa acgtgttcca acttgtaaag cctgcctttg cattcataac
     3601 tacaatatct ggcaaatgct ttaatgtcag gaacgtgaat atagcacttt ttgcgaccac
     3661 tttcaggatt tgaaccgaga gccatatatg acagacacat cagccaaacc cgttcgtatt
     3721 tgggatctgc ccacccgatt gtttcattgg ctttttgcca cgagcgtcat tggtgctgtg
     3781 gtaacagtca aggtgggcgg cagctggatg gactggcaca tgccgctagg catcacagcc
     3841 ctggtgctct tggcatttcg tttgatctgg ggctttaccg gatctcgcta tgcacgcttt
     3901 aacagttttt tcgtctcacc caaacaaacc tgggcctatc tgaagactcg gccacatgtc
     3961 gaatcagcag gacacaatcc acttggcgcc tggtctgtgt ttgcgttact gctggtagtc
     4021 ggcgtgcaag ccttcaccgg tctattcacc accgatgata ttttggtgca aggcccctta
     4081 aaccaattcg tcagtggcga cgtcgccagt ctcatgacga gcattcacaa attcaatgaa
     4141 accccacttt tcatattagt tgggttgcat ctggttgcca tcctgattta cgccattcgg
     4201 ggcgtcaaac tcgtacctgc gatggtgact ggcaacaaga ctgaggctga actaccggcc
     4261 aacacacgat ccgcccgcga cgatattgga ttacgcgcct gggcgtttgt gctaattgtt
     4321 ttgctgggca gcattggatg gtggctctac gagcttggtc aaaccgcccc aatgagtttt
     4381 tgagctcgag tgttcacaca gacgcgactg gagtaaaaaa aggtaccgtc acagacggca
     4441 ccttttaact agtcagcatt tggcgctaaa gcacttagtc ccggaaactg tcgtgacaag
     4501 ccttacagga tgcgccggtg tcaacaaacg cggccttgag cttatcgagg ttgccctctt
     4561 tcgcagctgc tgtcaacggt acgagcgaat ccaaatattt cttctgagcc gctttgaaac
     4621 cttcctcatc aagccagata tcgtcaagcg catcaccgcc ttcggtgcct ggcccaaacg
     4681 ctttccatgg cagcttcgag acttgatcga gaatttcgac gttagcaagc accattgcct
     4741 gatcgtaagg aatctggccc ttgaccactg gttgcaatgc cccaaagtgc gccttcatga
     4801 tttggaatgc accctcacga tagtcgatgg catcttgtgc cttgccaaac gcttgggcat
     4861 gaacattggc cgccaacagg ggtgcagcga gtgcaaacgt aagcgaagct agtagggatt
     4921 tcttcatgtg gatgacctcc ttaaaattca caacatgcac gttcgactat acccgttcaa
     4981 ggctgctttg ccagtgattt agacaagcca aggtagtttc ttggcgtcat ttttagcaat
     5041 cggtccttgt caacttgagg cagatcaagt tcagcgataa atccttgtag tgcatcgcgc
     5101 gtgataccct tgccacgcgt taaggccttg agctgctcgt agggctccgg taaaccgtgt
     5161 cgacgcatga cggtttgcac gggttcagcc aggatctccc agcactcgtc caaatcggca
     5221 tcaatgacaa cggcattgac ctcaagtttg ccaagaccct tggcgcaagc ttcataggcc
     5281 accacgcaat aaccaagtgc cacgccaaca ttgcgaagca cggtcgaatc ggtcaagtca
     5341 cgctgccaac gcgacacagg cagtttctca gccaaatgcc gcaacattgc attagcgagc
     5401 cctaagttac cttctgagtt ctcaaagtca attgggttga ccttgtgtgg catggttgaa
     5461 gagccgacct caccttcttt gagtttttgt ttgaaataac ccaacgagat atagccccac
     5521 acatcacggt caaggtccaa caaaatggtg ttggcgcgcg caatggcatc gaagagttca
     5581 gccatccagt catgcggctc aatttggatg gtgtgcgtgt tttgtgtcag accaagttcg
     5641 gcaaggacct tggcactgaa agcgggccag tcaatgtcag gataagcgct caagtgagcg
     5701 ctgtagttac cagtcgcacc gttgagtttg gctaatggct tgaccgcctc gatcgcgtcg
     5761 atcgcgcgcg ctagacgatg gctcacgtta gcaaactctt tgccgagcgt ggttggtgtg
     5821 a
//
LOCUS       DATBNL010000325         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_192856, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000325 DATBNL010000000
VERSION     DATBNL010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192856"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VIC30_05490"
     CDS             <1..440
                     /locus_tag="VIC30_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY7803869.1"
                     /translation="HDAMRILAEEWHGWLAYGLHSVFTLPFYLAIAGIVIMWYCYVIN
                     PKAPAAISKALSFLKPLLDNKYYFDWFNEKVIMPFSRWFGKELWEKVDQGVIDNTLVN
                     GSAKVVAAVAAVSRRLQSGYIYHYAFFMIIGLMALITFILVNK"
     gene            437..1936
                     /locus_tag="VIC30_05495"
     CDS             437..1936
                     /locus_tag="VIC30_05495"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019247436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEY7803870.1"
                     /translation="MMIGEIASSSVPWLTIAIFTPIIFGLIILLIGRDDQPNIARWLG
                     VIGATLGLLATIPLYTGFDTSTADMQFVHKAEWISVFAANYHVGVDGISLWYVLLTAL
                     ITLIVVIAGWGSITYKVSQYKAAFLILSGLMIGVFSSLDGLLFYVFFEATLIPMYLII
                     GIWGGPNRVYAAVKFFLYTLLGSLLLLVAFLYLWATTGSWAILDWQQAPLTYDEQVLI
                     FLAFLASFAVKVPMFPVHTWLPDAHPEAPTGGSVILAPIMLKLGAYGFLRFSLPITPD
                     ASVGLADLMIVLSLIAIIYIGFVALVQKDMKKLVAYSSISHMGFVTLGFFIFNIEGLK
                     GGLVQMVSHGFISGALFLCIGVLYDRMHTHKIADFGGVVNQMPKFVTFFVLFSMANAG
                     LPGTSGFVGEFMVILGAIHFNFWIGVLTATALILAASYSLWMVKRVAYGKVANERVAK
                     LKDLDAREFFVLGILAVATLYMGIFPKPFTDVMNASVHVLLEHIATGKL"
BASE COUNT          386 a          473 c          543 g          637 t
ORIGIN      
        1 gtcacgacgc catgcggatt ttggccgaag agtggcatgg ttggttagcg tatggcttgc
       61 actcggtctt tacgttgccg ttctatttgg ccatcgcggg tattgtgatc atgtggtact
      121 gctacgtgat taaccccaag gcacccgcgg caatatcgaa ggcattgtct ttcttgaaac
      181 cgctgctcga taacaagtac tacttcgact ggttcaatga aaaagtcatc atgccgttct
      241 ctcgttggtt cggtaaggag ctgtgggaga aggtggatca aggtgtgatt gacaacacgc
      301 ttgtcaatgg atcagccaag gtcgtggctg cagtggctgc agtgagccgt cgactgcagt
      361 cgggctatat ctatcactat gcgtttttta tgattatcgg gctaatggct ctgattactt
      421 ttattttggt aaataaataa tgattggcga gatagcatcc tcttctgtcc cttggctgac
      481 cattgcgatc ttcacgccca ttatttttgg actgatcata ttgttgattg ggcgtgatga
      541 tcagcccaat atcgctcgct ggttgggtgt tattggcgcc acgcttgggt tgttggccac
      601 cataccgctt tataccgggt ttgatacgtc aacggccgac atgcaatttg ttcacaaggc
      661 cgaatggatt tcagtttttg cagcaaatta tcatgtggga gttgatggca tttccctctg
      721 gtacgtattg cttacagcgc ttatcacgct gattgtggtg attgccggtt ggggctcaat
      781 tacgtataag gtctcacaat acaaagctgc attcctgatt ctgtcggggt tgatgatcgg
      841 ggtgttctcg tcactcgatg gtttgttgtt ttacgtgttt tttgaggcga cgctcatccc
      901 gatgtatctc atcatcggta tttggggcgg ccctaatcgc gtctatgccg cggttaagtt
      961 ttttctatac acgctgcttg gctcgttgct tttattagtc gcctttctat atctctgggc
     1021 gaccactggc tcatgggcga ttttagattg gcagcaggcg ccgctgacct acgatgagca
     1081 ggtgctgatc ttcctagcgt tcctggcctc ctttgcggtc aaagtgccca tgtttccagt
     1141 acatacttgg ttgccggatg ctcacccaga agcgccgacc ggtggttccg tgattctggc
     1201 gccgatcatg cttaagctcg gtgcgtatgg ctttttgcgg ttctcgttgc cgattacgcc
     1261 agatgcctcg gttggtttgg ccgatctaat gatcgtgctc tcgctgattg ccattatcta
     1321 catcggcttt gtggcgttgg tgcaaaagga tatgaaaaag ctcgtggcgt actcgtccat
     1381 ttcacacatg gggtttgtga cactaggttt tttcatcttc aatatcgaag gcctcaaggg
     1441 aggtctggtg cagatggttt cgcacggatt tatctctggc gccctgttct tgtgtatcgg
     1501 ggtgctctac gaccgcatgc atacccacaa gattgctgac tttggcgggg tggtcaacca
     1561 gatgccgaag ttcgtcacgt tctttgtgct ctttagtatg gccaacgcgg gcttgccagg
     1621 cacgagtggc tttgtcggtg aattcatggt gattctgggc gctatccatt tcaatttctg
     1681 gattggggtg ctgactgcta ccgctttgat tcttgctgca agttattcgc tttggatggt
     1741 caagcgtgtg gcctacggca aagtcgccaa cgagcgtgtt gccaagctta aagatctgga
     1801 tgcacgcgag ttcttcgtgc tcggcattct tgcagttgcc acgctctaca tgggcatttt
     1861 ccccaaaccg ttcaccgatg taatgaatgc gtctgttcat gttctgctcg aacacattgc
     1921 caccggaaaa ctataagtcg ccatgatgga atctcaattt aacttcgctc ttgtactgcc
     1981 agagatcatc ttgctggtgg cggccatggc cattctgatt atcgatgcgt tttcagatg
//
LOCUS       DATBNL010000326         2064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_53826, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000326 DATBNL010000000
VERSION     DATBNL010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53826"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VIC30_05500"
     CDS             complement(<1..650)
                     /locus_tag="VIC30_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803871.1"
                     /translation="MSQHDDNVQPFESIDERDLHAYVDGLLDAQRARQVQEYLKRHPD
                     KLKQVEDYRQYNELLRQAHQDVAQEPVPMRLLSIVDRPRQSLWPSITRMAAVGALCVV
                     SAGGGWLAAMQGGLGTSGDNGLVQNFLQQIATNTSAPFESMSVKKLDIQSGEQTDPLN
                     WLTQKVALEMEAPNLIAAGYTMQSRRLITRGAQEFVELTYVNSSGDAVMLYMKTRW"
     gene            complement(647..1198)
                     /locus_tag="VIC30_05505"
     CDS             complement(647..1198)
                     /locus_tag="VIC30_05505"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY7803872.1"
                     /translation="MKLTEQERREINWMISREIPALRRYAQTLLRGAGDKDDLVQDTL
                     ERAMNKVHTWRREGSIRSWLYRIQYTVFVNRYQSQIRRNEVTTEGLDHNESMTQYDKQ
                     DDRLECQRMLKALEQLKAQHSEVLVLIAVEGFSYDQAAQILNVPVGTVRSRLSRGREE
                     LRAEMQITQLNEQPMQSRSGGQS"
     gene            1428..1811
                     /locus_tag="VIC30_05510"
     CDS             1428..1811
                     /locus_tag="VIC30_05510"
                     /inference="COORDINATES: protein motif:HMM:NF025140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4168 domain-containing protein"
                     /protein_id="HEY7803873.1"
                     /translation="MKTLKHKLVMVAASLGMMSTAGLVTVASAQSSQTGTQATEQQAS
                     VSDAELQEFARARADVEQIQTKYQGRAQDVKSQEEMQKLQAQANDEMVAAVQSTNLSV
                     EQYNNIARLIQTNQQVLDRFMEIAR"
BASE COUNT          514 a          560 c          493 g          497 t
ORIGIN      
        1 tcccaacggg ttttcatata gagcatgacc gcatcccccg aggagttcac gtatgtcagc
       61 tcaacaaatt cctgtgctcc acgcgtaatc aatcgacgcg attgcatggt gtaccccgca
      121 gcgatcagat tcggggcctc catttcaaga gccaccttct gcgtcaacca attcaaggga
      181 tcggtttgct cccccgattg aatgtcgagt tttttcacag acatggattc aaatggcgca
      241 gatgtattgg tagcaatttg ctgtagaaag ttttgtacca agccgttatc accagacgta
      301 cctaaaccac cctgcatggc tgccaaccaa cccccgccgg ctgacacaac acacaacgca
      361 cccacagccg ccatccgtgt gatagacggc caaagcgact ggcgcggcct atcgacgatt
      421 gataacaagc gcatcggtac aggctcctgg gccacatcct gatgggcttg acgcagcagc
      481 tcattgtatt gacggtagtc ttcgacctgt ttgagtttgt cggggtgacg ttttaaatac
      541 tcttgaacct gacgggcacg ctgcgcgtca agcaaaccgt ccacgtaagc atgcaaatcg
      601 cgctcatcga ttgactcaaa aggctgtacg ttgtcatcgt gctggctcat gactgccctc
      661 ctgaacgtga ctgcatgggt tgctcattga gctgggtgat ttgcatttct gcgcgtagct
      721 cctcgcgccc tcgcgatagc cttgatcgta ccgtcccaac tgggacattt aggatctgcg
      781 cagcctggtc gtaagaaaac ccttcaaccg cgatgagtac caacacctcg ctatgctgtg
      841 ctttcaactg ctcaagggcc tttaacatcc gttgacattc gagccgatcg tcttgcttgt
      901 cgtattgcgt catgctctcg ttgtggtcta ggccctctgt ggtcacttca ttgcggcgta
      961 tttggctttg atagcgatta acaaatacgg tgtattggat gcgatagagc caactacgga
     1021 tgctgccctc gcgccgccac gtgtgtacct tgttcatggc ccgctctaac gtgtcctgca
     1081 ccaaatcgtc tttgtcccct gcaccacgca acagcgtctg agcatagcgg cgcaacgccg
     1141 gaatctcgcg tgagatcatc cagttgattt cgcggcgctc ttgctcggtt aatttcataa
     1201 atgcaactgc tcctgctaca gtttttttaa gccttatatg ccttatatga cttaccacta
     1261 cgatgacagt ctcaaggcct ataaagttcc aaaaaagtct ctcacgctcg atctgcgaga
     1321 gcgaatgatt agcaaatcga ctttatccag aaaaaaatgg aacgttttat ccaacgagac
     1381 tgtcttgggg gttcaagtta cacatgaacc atgaaggagt aaaacgaatg aagacgttaa
     1441 agcacaaatt ggtaatggtt gcagcatctc ttggcatgat gtcaacagca ggtctagtca
     1501 cggttgccag tgcacaaagt agccaaacgg gtacacaggc aactgagcaa caagcatcgg
     1561 tttcagatgc cgagttgcaa gagtttgcac gagctcgtgc agatgtcgag caaattcaga
     1621 ccaaatatca aggtcgtgcc caagacgtga aatcccagga agagatgcaa aagttgcaag
     1681 ctcaagccaa tgacgaaatg gtggccgccg ttcaaagcac caatctaagc gtggagcaat
     1741 acaacaacat tgcccggcta attcaaacca accagcaagt gttggatcgg ttcatggaaa
     1801 tagcacgcta ggttcttcat taagcaatag cagttaacga agaagcccgc attcccggtg
     1861 agcctcagtc agattatcag ttagaccctc gtttaaacga tccgtcagac ccaggctcac
     1921 cgcgctgggc ttagaacgcc agcatcttca catccgcttt gagcatgtag gccgccacat
     1981 cagcgggttt gcctggcttg acacccggga tcagcgcatc tggctttaag cctttgttgg
     2041 gcaagtacag cgcgcacacc tcca
//
LOCUS       DATBNL010000327         4898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_103595, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000327 DATBNL010000000
VERSION     DATBNL010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103595"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..740
                     /locus_tag="VIC30_05515"
     CDS             <1..740
                     /locus_tag="VIC30_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="TerL"
                     /protein_id="HEY7803874.1"
                     /translation="LDWIRCYAGGEYVYVQEGRPVWPEYDDSVMSTEDAPLDRTIPIH
                     IGLDFGLTPAAVFGQRLPSGRWNILKEIVTDDMGLERFGLILLNEINVNYPKMDILVW
                     GDPAGGKRDEIFEVTAFDHLKTIGLNARPTASNDFQVRREAGAMPMNRFIDRKPGLQV
                     YKDCQRLRKSLAGGYHFKRVAVGGGHERFRDAPNKNEHSHVGDAFGYLLLGGGEHRAM
                     TRGYGGRYGAAGPTGSQYQANTDFSIW"
     gene            734..1222
                     /locus_tag="VIC30_05520"
     CDS             734..1222
                     /locus_tag="VIC30_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803875.1"
                     /translation="MVTAHQIQEMINMKGLTILPFHETHMARVNPSKEDRHLFAHMPN
                     FDQMLIDLAQSKTGFTIFYERQPALCFGLDMRWPTMAEAWLVPGPVSIEHGTLLSRGT
                     RRFFDKIGPALGLRRLQIVVSVHRERAIQWAKFLKFKEEGLMVQYGPEGFDYYMYARI
                     YQ"
     gene            1219..1446
                     /locus_tag="VIC30_05525"
     CDS             1219..1446
                     /locus_tag="VIC30_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803876.1"
                     /translation="MSGIFGGGGAKAPDTSKQEALQEKQEARTKRQEAEEQRKLAAQQ
                     RARRTGGTRSLLSPDREDARRGLSSTLSGME"
     gene            1926..2060
                     /locus_tag="VIC30_05530"
     CDS             1926..2060
                     /locus_tag="VIC30_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803877.1"
                     /translation="MPMTEKGSKIKSAMKQKYGKKKGEQVFHASKNKGTVKGVEKKGY
                     "
     gene            2063..3613
                     /locus_tag="VIC30_05535"
     CDS             2063..3613
                     /locus_tag="VIC30_05535"
                     /inference="COORDINATES: protein motif:HMM:NF023657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HEY7803878.1"
                     /translation="MARISPQEILKRQEKADARKEEWRTIYEECYEFALPQRNLYSGH
                     YEGKTAGQNKMVRVFDSTAINATQRFANRIQSALFPPYRAWCNLEPGDDIPADRKAEI
                     REALQIYTQRMFSVVRQTNFDLAMSEFLLDLCVGTAVMLIQPGDEDAPVRFIPVPQYL
                     VSLEEGPHGTIDNVYRRMRIRGEAIQRQWPDAKIPERLQQEIDKKPEGEIDLIEATVF
                     NTDEDIYCYHLIWSKDKKTADELVYRTMTVSPWIVARFMKVPGEVYGRGPLVTALPDI
                     KTLNKVKELVLKNASLAVSGVYTAADDGVLNPQTIRIVPGAIIPVARNGGAQGESLRP
                     LRSATDFNTSQLVINDLVMNIKKMLYDDSLPPDNMSARSATEIVQRMKELSQNLGSAY
                     GRLITEAMTPIVRRILEVMDQMNIIDLPLEVNGLQVRVVPTSPLAQAQNMDDLDSVLQ
                     FAQIAQAFGQVGQMAINQEEMLTYVAEKMGVPQSLLNTPEEKEIIVQQMQQQAAQMQQ
                     MQQQPPQA"
     gene            3623..3886
                     /locus_tag="VIC30_05540"
     CDS             3623..3886
                     /locus_tag="VIC30_05540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803879.1"
                     /translation="MEGWDSLRQSDNEHLQQNKLAQDDINVLYVRCFSTEAGIEVLEH
                     LKSVTLDQPTWYPGEDPSHGFAREGQNSVVREILRRIERGRQA"
     gene            3883..4680
                     /locus_tag="VIC30_05545"
     CDS             3883..4680
                     /locus_tag="VIC30_05545"
                     /inference="COORDINATES: protein motif:HMM:NF017233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803880.1"
                     /translation="MSEEALMENENTQEESSSLLSPTATPEVDQDRPTEMPHMVQDDQ
                     VAEGDGEIDWGERPDYIPEQFWDEKDGPDLEGMAKAYQEMRTKMSQGKHKAPKDGKYD
                     IAQLKDHGVMDDDPLLGEFSNFAKDNGLSQDQFDQITSMYMQHMNEMMGDIDTNREAE
                     MAKLGPKGDKVVSSLNQWLTKLGTSGALSAEEVDAIAAKADNANFIMALNKIRQSYGE
                     QAIPDITVQEGSTYSKADLESMIADPRYGKDMSYTQQVEQKFYDMYN"
BASE COUNT         1325 a         1165 c         1383 g         1025 t
ORIGIN      
        1 acttagattg gatccgctgt tatgccggcg gcgaatatgt gtatgtacaa gaaggtcgcc
       61 cagtgtggcc ggagtacgac gactcggtga tgtccacaga ggatgcgcca ctggatcgca
      121 ctatcccaat acacatcggc ctcgactttg gtttgacacc tgcggcggtc tttgggcagc
      181 gcctgccatc tgggcgctgg aatatcctga aagagatcgt cacagacgac atgggcttgg
      241 agcgattcgg attaatcctg cttaatgaga tcaacgtcaa ctatcccaag atggacattc
      301 tggtctgggg cgaccctgcc ggtggcaagc gtgatgagat tttcgaggtg acggcgttcg
      361 accacctcaa gacgattggc ctcaacgcac gcccgacagc gagtaacgac ttccaggtgc
      421 gccgtgaagc gggagcgatg cccatgaaca ggtttattga tcgcaagcct gggcttcagg
      481 tgtacaagga ttgccaaaga ttgcgcaagt ctttggccgg cggctatcac ttcaagcgcg
      541 tcgccgtagg cggtgggcat gagcgcttcc gcgatgcgcc gaacaagaac gaacactcac
      601 acgtcggcga tgcgttcggg tatctcctgc tcggcggcgg tgagcacagg gcgatgacta
      661 ggggctacgg cggtcgctac ggcgcagccg ggccgaccgg atcgcagtac caagctaaca
      721 cggacttttc gatatggtga cagcgcatca gattcaagaa atgatcaaca tgaaggggct
      781 gactatcctg cccttccatg agacgcacat ggctcgcgtg aacccgagca aagaagatcg
      841 gcacctgttt gcgcacatgc caaactttga tcagatgctt attgatctag ctcagtcgaa
      901 gacggggttc actatttttt acgagcgaca acctgcgctg tgctttggtt tggatatgcg
      961 ctggccaaca atggcagagg cttggctagt gcctggacca gtttctatcg aacacggaac
     1021 acttttgagt cgcggtaccc gtaggttttt tgataagatt ggcccagctc tcggtttacg
     1081 gcgactgcag attgtggtaa gtgtccaccg tgaaagggcg atacagtggg ctaagttcct
     1141 aaaattcaag gaagaaggct tgatggttca gtatggccca gaagggtttg actactacat
     1201 gtatgcgagg atttatcaat gagtggaatt tttggcgggg gtggagctaa agctccagac
     1261 acatcaaagc aagaggcatt gcaagagaag caagaggcgc gcaccaagcg tcaggaagct
     1321 gaagagcagc gcaaacttgc cgcccagcaa cgcgctcgcc gtaccggcgg cacgcggtca
     1381 ttgttgtcgc cggatcgtga agatgcgcgg cgtggtttat caagcacatt aagtgggatg
     1441 gaataattat gggattcgga agaagaagct caccagcacc ggcacctaag ccagagccgg
     1501 ctccagagcc agttgttgaa aaggtagatc gtcgagctga acaggatgca gctgcgctgc
     1561 gcgcaaggaa tcgtcgcggt ggtcagcgct cattgctgtc aacctcgcgg gaagaagcgc
     1621 agaccggttt gtctaacaag ctcagtggcc agtaatgcgc aaagagcata agagcccgag
     1681 cggcgggctg actgaagcgg ggaggagaca ctttgaggcg aaggaaggtg gaaaccttaa
     1741 acctcctgtt tctagtggca ctaaccctcg ccgtgtatct ttcgctgctc ggttcgctgg
     1801 ccagagtcat cctatgaagg acgacaaggg caagccaacg cgttatgccc tggctttgaa
     1861 gaagtggggt ttcagttcac cggcagaggc tagagccttt gcaaagcggc acaaggagtc
     1921 ttgatatgcc aatgaccgag aaaggttcaa agattaagtc tgcgatgaag cagaagtacg
     1981 gcaagaagaa aggcgagcaa gtctttcacg cgtcgaagaa caaaggcacc gttaagggcg
     2041 tcgagaaaaa gggatattaa ccatggcacg catcagtcct caagaaatcc tcaagcgcca
     2101 ggagaaggct gacgcacgca aggaagagtg gcgcacgatt tatgaggagt gctatgagtt
     2161 tgcattacct cagcgcaacc tgtactcagg ccactacgaa ggcaagactg ccggccaaaa
     2221 caagatggtg cgggtatttg actcaactgc gatcaatgcg acgcagcgtt ttgccaaccg
     2281 tattcagtct gctttgtttc ctccgtaccg cgcatggtgc aatctggagc cgggcgatga
     2341 catccctgcg gatcgcaagg ccgagattcg cgaggcgtta caaatttaca cacagcgcat
     2401 gttctctgtt gtacgacaga ccaactttga tttggccatg tctgaattcc tactcgacct
     2461 ttgcgtcggc acagcggtca tgctcatcca gcctggagat gaagatgcac ccgttcggtt
     2521 cattcctgtg cctcagtatc ttgtatcctt ggaagagggt ccgcacggta cgattgataa
     2581 tgtgtacaga cgtatgcgga tcagaggcga agcgatacaa agacaatggc ctgacgccaa
     2641 gattccagaa agactgcagc aagaaattga caagaagccg gaaggcgaga tcgatctgat
     2701 cgaggcgact gtattcaata cagacgaaga catctactgc tatcacctga tttggtcgaa
     2761 agacaagaag actgcagatg agctggtgta ccgcaccatg acggtttcgc catggatcgt
     2821 cgcacggttt atgaaggtac cgggcgaagt ctatggccgt gggccactgg tcactgcatt
     2881 gccagacatc aaaacgctga acaaagtcaa agagttagtg ttgaaaaacg catcgctagc
     2941 cgtgtcgggt gtgtatacag cggctgatga tggtgtgctg aacccacaga caatccgcat
     3001 tgtgcctggt gcaatcatcc cagttgctcg gaacggtgga gcgcagggtg agtcattgcg
     3061 tccattgcga tctgctactg acttcaacac gtcgcagctg gtcattaatg atttggtcat
     3121 gaatatcaaa aagatgctgt acgacgattc gctaccgcct gacaacatgt cggcgcgtag
     3181 tgcgacagag atcgtgcagc gcatgaagga attgtctcaa aacctaggtt ctgcctatgg
     3241 gcgtttgatt actgaggcga tgacgccaat cgtgcgacgc atccttgaag tgatggatca
     3301 aatgaacatc attgatctgc cattagaggt aaacggacta caggtacgcg tcgtaccgac
     3361 gtcgccgttg gcgcaagcac agaacatgga tgatctggac tctgtgctac agtttgcgca
     3421 gattgcgcag gcgtttggtc aggttggtca aatggccatc aatcaggaag agatgctgac
     3481 ctatgtggca gaaaagatgg gtgttccaca gagtctgttg aacacgccgg aagaaaaaga
     3541 aattatcgtg cagcaaatgc aacagcaagc tgctcaaatg cagcaaatgc aacaacagcc
     3601 gccgcaggct taggagtgag gcatggaagg ttgggacagt ctgcgtcagt cagacaacga
     3661 acacctgcaa caaaacaaac tcgcacagga tgacatcaac gtattgtatg tacgttgttt
     3721 ctccactgag gcgggaatcg aagtacttga gcacttgaag tctgtgacat tggatcagcc
     3781 aacctggtat ccgggcgaag atccaagtca cggctttgcg cgtgaaggtc aaaacagtgt
     3841 agtgcgcgag atattgcgcc gaattgaaag aggaagacaa gcatgagtga agaagcgtta
     3901 atggaaaacg aaaacacgca ggaagaatcc agctccctgt tatcaccaac tgcgacgcca
     3961 gaggttgacc aagaccggcc aaccgaaatg ccgcacatgg tgcaagacga tcaagttgca
     4021 gaaggcgatg gcgagataga ttggggcgaa agacctgact acattccaga gcagttctgg
     4081 gacgaaaaag atggtccaga cctagagggt atggccaagg catatcaaga gatgcgtacc
     4141 aaaatgtcac aaggcaagca caaagcgccg aaggacggga agtacgacat cgcacagctc
     4201 aaggaccatg gcgtcatgga tgacgaccca ttgctgggtg agtttagcaa ttttgcaaaa
     4261 gacaatggat tgagccaaga ccagttcgat cagatcacgt ctatgtacat gcaacacatg
     4321 aacgagatga tgggcgacat cgacacgaat cgcgaggctg aaatggcgaa gctggggccg
     4381 aaaggtgaca aggtggtgtc aagtcttaat cagtggctaa cgaagctcgg cacatctgga
     4441 gcgttatcag ctgaagaagt cgacgctatt gcggcgaagg ctgacaacgc gaacttcatc
     4501 atggccttga acaagatccg tcaatcctat ggtgagcaag cgatacctga catcacggtt
     4561 caagaaggca gcacctactc aaaagcagac cttgagtcga tgatcgccga cccgcgctat
     4621 ggcaaagata tgtcttacac gcaacaagtt gagcaaaagt tttacgatat gtataactaa
     4681 tgtatacagg gggagcaact tgctctcccc ttcttgtttg aaacccacaa aaacctgata
     4741 tattccaatc aaccgacaac tcagattcct gagccggcga cctgactgat gcggcccaca
     4801 cggataaccg atacaggttt tacccttaaa gaaatttttt gattggagaa agtacaatgg
     4861 cagtacaaat ttcaaatgcc tttgtaacct tgttcgac
//
LOCUS       DATBNL010000328         2072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143489, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000328 DATBNL010000000
VERSION     DATBNL010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143489"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..1789
                     /gene="gadC"
                     /locus_tag="VIC30_05550"
     CDS             182..1789
                     /gene="gadC"
                     /locus_tag="VIC30_05550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate:gamma-aminobutyrate antiporter"
                     /protein_id="HEY7803881.1"
                     /translation="MATKTPDTAANLTINSTAKQLSLIGFFAITASMVMAVYEYPTFA
                     TSGFSLVFFLLLGGALWFVPVGLCAAEMATVKGWEEGGVFAWVSNTLGERWGFAAISF
                     GYLQIAIGFIPMLYFVLGALSYILKWPALNDDPVVKTIAGLVILWVLALTQFGGTKHT
                     AQIAKVGFFAGILLLALILIALAISYLTTGGHIAIEMSAATFFPDFTQLGTLVVFVAF
                     ILSYMGVEASATHVNEMKNPGRDYPLAILLLMIAAICLSSIGGLSVASVIPLDKINLS
                     AGVVQTFEVLVKHYGAGLEWAVRAIAALLVLGVLAEIAAWIVGPSRGMYVTAQKGILP
                     HRFNKVNKNGVPVALVIFQLSITTLALIVLTNTGGGNNLSFMIALTLTVLIYLCSYFL
                     LFLGYLQLVLKQPEKERVFNVPGGKNVKVIVASSGFIISVLAFLVSFVPPTSLPASES
                     IGAYLELLIGSFVVVVAIPFIVYAVHTKHGKTTNATMHHIKHHSAPKGHFFIHPRARS
                     THHFQVHDETAESVNPDSDNAEKTDSK"
BASE COUNT          457 a          568 c          516 g          531 t
ORIGIN      
        1 cgatttgacc tgcgggttga attgaagtgc ccattaatcc ccttaaaccc ttcataccct
       61 ttaaacctac tcccaccaga ctagcagaga ctcgaacccc gacactccaa aagtccgaac
      121 tctttgcacg tcattacagt ccgaccaact gttaatcaac accacaataa gggagccatc
      181 tatggccacc aaaaccccag atacagcagc caacttaacg atcaactcga cagctaaaca
      241 gcttagtctg attggttttt ttgcgatcac ggcctccatg gtcatggccg tctacgagta
      301 cccaacgttt gccacatccg gctttagcct ggtgtttttt ctgttgttgg gcggagcgct
      361 ttggttcgtg ccggttggtc tatgtgccgc agagatggcc accgtcaaag gctgggaaga
      421 aggtggggta tttgcctggg tgagcaatac gcttggtgaa cgctgggggt ttgcagcgat
      481 ctcgtttgga tacctgcaaa ttgccattgg ctttatcccg atgctgtatt ttgtgctcgg
      541 cgccttgtca tacatactca aatggccagc gcttaatgac gaccccgtcg tgaagaccat
      601 cgccggcctc gttattctct gggtattggc cttgacccag ttcggtggca ccaaacacac
      661 cgcgcagatc gccaaggtgg gcttttttgc agggattttg ctgctcgcat tgatcttgat
      721 cgcgctggcc atcagttact tgaccactgg cggacacatc gccatcgaaa tgtcggcagc
      781 caccttcttt ccagatttca cgcagttggg caccttggtg gtgtttgtgg cattcatctt
      841 gagctacatg ggcgttgaag cgtcggccac gcacgttaat gaaatgaaaa acccaggccg
      901 cgactaccca ctggcgatcc tgctgctcat gattgcggcc atttgcctaa gctccattgg
      961 tggcctgtct gtggcctcgg tcatcccgct cgacaaaatc aatctgtcgg ctggcgtggt
     1021 gcaaaccttt gaggtgttgg ttaagcacta tggcgcgggc ctcgagtggg cggtgcgcgc
     1081 cattgccgcc ttgttggtct tgggtgtgct ggctgaaatt gccgcctgga ttgtcggtcc
     1141 gtcacgcggc atgtacgtca cagctcaaaa aggcatcctg ccgcaccgct ttaacaaggt
     1201 caataaaaac ggcgtgcccg tggctttggt gatatttcaa ttgtcgatta ccacgctggc
     1261 tctgattgtg ttgaccaaca ccggtggtgg caacaacttg tcgttcatga ttgccctgac
     1321 actcacggtt ttgatttacc tgtgtagcta tttcctgttg tttctgggtt acctgcagct
     1381 cgtgctcaag caaccagaaa aagaacgggt ctttaatgtg cccggtggca aaaacgtcaa
     1441 agtgattgtc gcaagctctg ggttcatcat ctcggtgctg gcgtttctgg tgtcgttcgt
     1501 gccaccaacc tcactgccgg cctctgaaag tatcggtgcc tacctcgaac tcctcattgg
     1561 cagcttcgtg gtggtcgtgg cgattccctt cattgtttat gcggtgcaca ccaagcatgg
     1621 caagaccacc aacgcaacga tgcaccacat caagcaccac agcgcgccca agggtcactt
     1681 cttcatccat ccgcgcgcac gctcaacgca tcactttcag gtgcatgatg agacggctga
     1741 aagtgtgaac cccgacagcg acaacgctga gaaaactgac agcaagtgat aacaactggc
     1801 gtcaaaccac aaggtttgac gccagtgcag acagcacttc aatcgattga tcactagttt
     1861 tcactgtttc taccattttc accatttggt gaaaatggta gaaacagtga aaactttgtt
     1921 ggcgtgcatt gcaagtcgcg cgctggcagc taacgccagt tcaataaact gggtcgtaca
     1981 aattcaaccg cagctctcgc gccacatccc caatcatttt ttgtgctcta acgctattac
     2041 ccacactatc gagtggtgga gagaatgcag ca
//
LOCUS       DATBNL010000329         4446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_14138, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000329 DATBNL010000000
VERSION     DATBNL010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4446
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14138"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1352)
                     /gene="glmU"
                     /locus_tag="VIC30_05555"
     CDS             complement(<1..1352)
                     /gene="glmU"
                     /locus_tag="VIC30_05555"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEY7803882.1"
                     /translation="MLNIVILAAGMGKRMQSSQPKVLQTIGGQSMLSRVINTARSLSP
                     DRLIIVVGHGEELIRQSLEGQTDVHFVSQWPQLGTGHAVAQTSAWLKDGPENNATMVL
                     YGDVPLVQTDTLQALLAASDNGLALLTEDLDFPHGYGRIVRDAQNRVQTIVEEKDATA
                     AQRQIKEVNTGMLVAPTGKLVQWLERLDNNNAQGEYYLTDIVAMAAKDGVSINTVAPQ
                     ASYETQGVNSRQQQAELERLWQQELATRQLRSGVALADPARFDQRGELMCGQDVFIDV
                     GCVFEGMVVLGDGVTIGAHCVLKDVTVGAGTQILSFSHLQQADIGKGAQIGPYARIRP
                     GTRLDDEVHIGNFVEIKNTHIETQSKVNHLAYVGDADIGQRVNVGAGTITCNYDGANK
                     HRTVIEDDAFIGSDTQLVAPVKVGKGATLAAGTTLTKDAPPHKLTMSRSSQKTLENWQ
                     R"
     gene            complement(1357..2052)
                     /locus_tag="VIC30_05560"
     CDS             complement(1357..2052)
                     /locus_tag="VIC30_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhaM family polyhydroxyalkanoate granule
                     multifunctional regulatory protein"
                     /protein_id="HEY7803883.1"
                     /translation="MSQDSHNPFAIPGMNAAFMSSPNNPLLASMDMMRQAMGNMGYGA
                     KTTTGESMPNPMAPEELEKRIAELRVVENWLKLNLSMLSSTIQGMEVQHATVKTLQSF
                     VAMGQTGTTHTDSAASPLEVALGLKPAPKGKASAPQPAPTPPTDDSSSAPASANESPQ
                     QAAAQGWWNMLENQFAQIAAATANAAKVNNEHLQKAAAMQQPKKPAASKTATKRAAKK
                     TTRTTQAPKKSSP"
     gene            2120..2344
                     /locus_tag="VIC30_05565"
     CDS             2120..2344
                     /locus_tag="VIC30_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3717 domain-containing protein"
                     /protein_id="HEY7803884.1"
                     /translation="MTKHISITDIEAAINYWRQTHPAQGEELRLNRLAAALAEPYAML
                     IMTRRSEVDVANLDSAAQEAIDQWRRASGQ"
     gene            complement(2333..2920)
                     /locus_tag="VIC30_05570"
     CDS             complement(2333..2920)
                     /locus_tag="VIC30_05570"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY7803885.1"
                     /translation="MSRLRVWLLVLSLGFLTACSDQTDFLGSDISGGDIGQGWTLTDH
                     HGQSASIDRFNDKVTLVFFGFTQCPDVCPASLSEVHNALAQLGDQAKDVQVLMVTVDP
                     ERDTPEVIEEYLGAFSDGLPTEFLGLTGNPEQVRKAAQTFRAYYAKVPTEDGSYTMDH
                     SASYYLFDPAGQARVLVSNQAGPDALAHDIKQLLP"
     gene            complement(2947..3852)
                     /gene="cyoE"
                     /locus_tag="VIC30_05575"
     CDS             complement(2947..3852)
                     /gene="cyoE"
                     /locus_tag="VIC30_05575"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEY7803886.1"
                     /translation="MTTATAHNNPSLWRQYMVLTKPRVTQLAVFCAVIGMFLATPTIP
                     SLQTLVAGTAGIWLLAAAAFAVNCLIEQQIDAKMLRTSRRATATGTISSQQVILLSGL
                     VGGAGMFVLYQWVNPLTMWLTFATFVGYAIIYTMILKPRTPQNIVIGGLSGAMPPALG
                     WAAVANNVPAEAWLLVLIIFIWTPPHFWALALYRNKDYEKSGLPMLPVTHGQSFTRLH
                     ILLYSIALLGTTLLPFAVRMSGWLYLACAVVLGLRFIQISWQLYQSYSDDKARQLFKY
                     SILYLALLFGSLLADHWLIALSARA"
     gene            complement(3862..>4446)
                     /locus_tag="VIC30_05580"
     CDS             complement(3862..>4446)
                     /locus_tag="VIC30_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEY7803887.1"
                     /translation="LALMTWLAARERYHIPINPDNHRYKPWVAFGLILLFMQIGLGGW
                     VSTNYAALACMDFPTCNGQWIPPMNFEEGFSLVRGLGVLPNGEAISQLALVAIHWVHR
                     NFAWVIFAYMGFLVWRLRGDPGLRGPCHLIALLLVAQLFTGLTTIFFEWPLLIAVLHN
                     GGAAGLTLATVTLLVRVTGMQPAQVRRANVPQFA"
BASE COUNT         1010 a         1191 c         1228 g         1017 t
ORIGIN      
        1 cgctgccagt tttcaagggt tttctgcgaa gatcgagaca tggtcagctt atggggtggc
       61 gcatctttgg tcaacgtcgt gccggcagcc aaggtagcac ccttgcccac cttgaccggt
      121 gcgacaagct gtgtatctga gccgatgaat gcgtcatctt caatgacggt tcggtgtttg
      181 ttggcgccat cgtaattaca tgtaatcgtg cctgcgccca cattgacacg ttggccgatg
      241 tcggcgtcac ccacataggc cagatgattg accttgcttt gcgtctcgat atgggtgttt
      301 ttgatttcca caaagttgcc aatgtgcact tcatcgtcaa gccgtgtacc tggccgaatg
      361 cgcgcatagg gtccaatctg tgcgcccttg ccgatatcag cctgttgcaa atggctaaat
      421 gacagaattt gcgtgccagc gccgaccgtc acatctttta agacgcaatg ggctccaatg
      481 gtcacgccat cgcccaagac caccatgcct tcgaacacac atcccacgtc aatgaacacg
      541 tcttggccgc acattaattc accgcgctga tcaaaccgtg ctgggtcagc aagcgccaca
      601 ccactgcgta actgccgtgt cgccaattct tgttgccaga gtcgttcaag ctcggcttgt
      661 tgctgccggc tattgacacc ttgggtttca tacgaggctt ggggtgcgac ggtgttaatc
      721 gacaccccat ctttggcggc catggccacg atatcggtca ggtaatactc gccttgcgca
      781 ttgttattat ctagtcgctc cagccactgc acgagtttgc cggtgggtgc cactagcatg
      841 ccggtgttga cttctttgat ttgccgctgc gccgctgtag cgtctttttc ctcgacaatg
      901 gtttgcacgc ggttttgtgc gtctcgcaca atccgaccat aaccatgcgg gaaatcgagg
      961 tcctcagtta gcagggctaa cccattgtca ctggccgcga gcagtgcctg caaggtgtca
     1021 gtctgcacca gaggcacatc accgtatagc accatggtgg cattgttttc tgggccgtct
     1081 ttaagccagg ccgacgtttg tgccaccgca tggccagtac ctagctgcgg ccattgcgaa
     1141 acgaaatgca cgtcggtttg accttcaagg gattggcgaa tcaactcttc accatgtcct
     1201 acaacaatga tcaaccggtc cggtgacaag gatcgggcgg tattgattac ccgcgacaac
     1261 atggactgcc caccaatggt ctgtaagacc ttgggttggc tggattgcat gcgcttgccc
     1321 atgccggcag ccaaaataac aatattcaac atacgtttac ggcgaagatt ttttcggggc
     1381 ttgtgtggtg cgggtggttt tcttggctgc gcgtttggtg gccgtcttgg acgccgccgg
     1441 ctttttcggc tgttgcatgg cagcagcctt ttgcaggtgt tcgttgttta ctttggccgc
     1501 gttagctgtg gccgcggcaa tttgcgcaaa ttggttttcc agcatgttcc accagccttg
     1561 tgcagccgcc tgttgggggc tctcgttggc gctagctggt gcgctcgaag agtcgtcggt
     1621 aggcggtgtt ggggcgggct gaggcgcgga tgctttgcct ttcggtgctg gttttagccc
     1681 caaggcaacc tccaatggcg aggcagctga atcggtgtga gtcgtgccag tctgtcccat
     1741 cgcaacaaag gactgcagtg ttttgacggt cgcgtgctgc acttccatgc cttgaatcgt
     1801 gctgctaagc atcgataggt tgagttttaa ccagttctcg accacacgaa gctcggcaat
     1861 ccgtttttca agctcttcgg gggccatcgg gttcggcatg gattcaccgg tagtggtttt
     1921 ggcgccatag cccatattgc ccatggcctg gcgcatcata tccatactag ctaacaaggg
     1981 gttgttggga ctgctcatga acgccgcgtt catgccggga atggcgaaag ggttgtggct
     2041 atcttggctc atgcgtgtct ccctctttgg tggtcgggct tagtgttcat cataagagat
     2101 attctgcaac aatgcgtgca tgacgaaaca catttcgatt actgatattg aagcagcaat
     2161 taattattgg cgccagaccc accccgccca aggcgaggag ttacggttga atcggcttgc
     2221 tgccgccttg gctgaaccct atgcgatgct catcatgacg cgcagaagtg aagtcgatgt
     2281 cgcaaacctt gatagcgctg cgcaagaggc catcgatcaa tggcggcgtg cgtcagggca
     2341 ataactgttt gatgtcatgt gccaacgcat cgggtccagc ctgattgctc acgagcacac
     2401 gggcttggcc agcaggatcg aacagatagt atgaagcgct gtgatccatg gtgtagctgc
     2461 catcttctgt gggcactttc gcgtagtaag cgcggaaggt ctgggcagcc tttctgactt
     2521 gctcaggatt gccggttaat cctaagaatt cagttggcag tccatcactg aaggcgccga
     2581 ggtactcttc gatgacctcg ggcgtgtcac gttccgggtc aacggtcacc atgagtactt
     2641 gtacgtcttt ggcctgatca cccaattgcg ctaaggcgtt gtgaacttca gacaatgagg
     2701 ccgggcaaac gtctgggcat tgcgtaaacc caaaaaagac caacgtgact ttgtcgttaa
     2761 accgatcgat cgaggctgat tgaccgtggt ggtcggtcag ggtccaaccc tgaccgatgt
     2821 cgccaccgga gatgtcgcta cctaaaaagt ccgtctggtc tgagcaggcg gtaagaaagc
     2881 caaggctcag taccaagagc caaacacgta aacgcgacat caaaacgatt tccccacaat
     2941 ggcgcctcag gcgcgtgcac ttaaggcaat aagccaatga tcagctagta agctaccaaa
     3001 caaaagtgcc aggtaaagga tggagtattt gaacaattga cgggccttgt cgtcgctata
     3061 tgactgataa agctgccaac tgatttgtat gaaacgcaat ccgagcacaa cagcacaagc
     3121 caaatacagc caaccactca tgcgcaccgc gaagggcagc aatgtcgtgc caagcaaggc
     3181 aatgctgtat agcaaaatgt gcaaacgggt aaagctttgg ccatgggtga cgggcagcat
     3241 cggcaaacca gacttctcat aatccttatt gcgatacaag gccagcgccc aaaagtgggg
     3301 tggggtccag ataaagataa tcagcaccag caaccaagcc tcagccggaa cgttgttggc
     3361 cacagcagcc cagccaagtg cgggcggcat ggcaccagac aaaccgccga tcacaatgtt
     3421 ctgaggcgtg cgcggcttga ggatcatggt gtagatgatg gcatacccaa caaacgtggc
     3481 aaacgtcagc cacatggtca gggggttgac ccattggtag agcacaaaca tgccggcacc
     3541 accaaccaaa cccgacaata aaatcacttg ttgagaggaa atggtgccag tcgccgtggc
     3601 gcggcgagac gtgcgtaaca tcttggcgtc aatctgctgc tcaatcagac agttcacggc
     3661 aaacgcggcc gctgccaata accagatccc ggctgtcccg gccaccaggg tttgtagcga
     3721 aggtatggtt ggtgttgcca agaacatgcc aatgaccgca cagaacacag caagctgcgt
     3781 gacacgcggc ttggttagca ccatgtactg gcgccaaagc gaagggttgt tgtgtgcggt
     3841 tgcggttgtc atattcgtat tttaggcaaa ctgaggcaca ttcgcacgtc ttacctgcgc
     3901 tggttgcatg ccagtgactc ttacaagcaa cgtaaccgtg gccaaagtca ggcccgcggc
     3961 gccaccgtta tgcaagacgg cgattagcaa aggccattca aagaagatcg tggtcagccc
     4021 ggtaaagagt tgtgccacca gcaaaagtgc gatcagatgg caagggccgc gtaggccggg
     4081 atcgccgcgc aagcgccaca ccagaaagcc catataggca aatattaccc atgcaaagtt
     4141 gcggtgtacc cagtggatgg ccaccagcgc cagttgggaa atcgcttcgc cattgggcaa
     4201 gacacccagc ccgcgcacga gcgagaaccc ctcctcaaaa ttcatggggg ggatccactg
     4261 accgttacag gttgggaagt ccatacacgc tagggccgca taattcgtac taacccagcc
     4321 gcccaatccg atctgcataa ataacagtat cagcccaaag gcgacccacg gtttgtagcg
     4381 gtgattatcg ggattgatcg ggatgtgata tcgctctcgc gccgctaacc aggtcattaa
     4441 tgccag
//
LOCUS       DATBNL010000330         4466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113427, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000330 DATBNL010000000
VERSION     DATBNL010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4466
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113427"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VIC30_05585"
     CDS             complement(<1..198)
                     /locus_tag="VIC30_05585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009457694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEY7803888.1"
                     /translation="MSDSATKKRPQFRNINVLQLLKYRLPLAGRLSILHRVSGALMFL
                     LLPVLILPLFAMSMSPTGFEAF"
     gene            complement(336..1106)
                     /locus_tag="VIC30_05590"
     CDS             complement(336..1106)
                     /locus_tag="VIC30_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008329941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7803889.1"
                     /translation="MDNNESLAQAVAPARREQAASFSPLYQQIRQLLLQALEKGEWKP
                     GESIPSEFELARRFHVSQGTVRKAIDELASEHILIRRQGKGTFVATHQEPVVRFRFLR
                     LAPSDGQPVPAESEILWCRKIKASADTASALDLRSGDGVIYIRRLLRFRGQPTVIDDI
                     YLPAVMFKGLTMALLTENEGPLYGLLESRFGVSMVRADERLRAVGAPADVADLLDIGA
                     EQPLLRVDRISYTYGDRAVELRYGHYLTDEYFYRNTLM"
     gene            1335..2324
                     /locus_tag="VIC30_05595"
     CDS             1335..2324
                     /locus_tag="VIC30_05595"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006028603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016615 - malate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEY7803890.1"
                     /translation="MTKPAMRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEI
                     PDEKAQNALKGVMMELDDCAFPLLQSMSAHSDPKEAFKDADVALLVGSRPRGPGMERK
                     DLLTVNAQIFTVQGQALNETASRDVRVLVVGNPANTNAYIAMKSAPDLKPENFTAMLR
                     LDHNRALSQLATKLGRPVADIQKLAVWGNHSPTMYPDYRYATIGGQSVAKIINDDAWN
                     RDVFIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVMGTDGKWVTMGIPSDGSYG
                     IPEGVMYGVPVTCEGGQYHRITGLEIDEFSRERMDLTLKELLEERDGVADLLK"
     gene            2391..3281
                     /gene="prpB"
                     /locus_tag="VIC30_05600"
     CDS             2391..3281
                     /gene="prpB"
                     /locus_tag="VIC30_05600"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEY7803891.1"
                     /translation="MTQTQSAGARFRAALKEESPLQIIGAINANHALLAKRAGYRAIY
                     LSGGGVAAGSLGLPDLGINTLDDVLTDVRRITDVCDVPLLVDIDTGFGPSAFNISRTV
                     KSLIKFGAAACHIEDQVGAKRCGHRPGKEIVSTEEMRDRVKAAADARTDENFYLIART
                     DAIAVQGVDAAIERGLACVEAGADAIFAEAAYDLPTYEKFVKAVGVPVLANITEFGKT
                     PLFTVEELRSVNVGMVLYPLSAFRAMNKAAETVYETIRRDGHQKNVVDMMQTRDELYD
                     RIGYHEYEQKLDALFTQSKS"
     gene            3310..>4466
                     /gene="prpC"
                     /locus_tag="VIC30_05605"
     CDS             3310..>4466
                     /gene="prpC"
                     /locus_tag="VIC30_05605"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEY7803892.1"
                     /translation="MATTRKTATKKTVEQPTSAPKPKKSVALSGVIAGNTALCTVGRT
                     GNDLHYRGYDILDFADVCEFEEIAHLLIHGKLPTKSELVAYKEKLKAMSDLPAQLQAA
                     LEALPASSHPMDVMRTATSVLGCVLPEKDDHNIPGARDIADRLMACLGSALLYWYHYS
                     HNGRIIDVQTDDDSIGGHFLHLLHGKTPDQDWVRAMHTSLILYAEHEFNASTFTSRVI
                     AGTGSDMYSAITGGIGALRGPKHGGANEVAFEVQKRYETPDEAEADIRRRVENKEVVI
                     GFGHPVYTIADPRNEVIKSVAQRLSKKANNMKMYNIAERLETVMWDVKKMFPNLDWFS
                     AVSYHMMGVPTAMFTPLFVIARTAGWSAHIIEQRVDNKIIRPTANYVGPEN"
BASE COUNT         1089 a         1256 c         1130 g          991 t
ORIGIN      
        1 aaacgcctca aaaccggtgg gcgacatgct catcgcaaac aacggcagaa tcaagactgg
       61 cagcaacaaa aacatcaatg cgccgctgac tcggtgaaga atcgacagtc tgcccgccag
      121 aggcaggcga tattttagga gttgcaaaac gttgatatta cgaaattgcg gtcgcttttt
      181 agttgcgctg tctgacatgc tggcctcttt cttcaaaaca aacgataagt aaaactggtt
      241 ctggtgtctt taatttttgc tacgcaaatt gcgccctttg aattcccgta ttttcgccta
      301 ttggcgccca tctctcaaat caacctaaat cccagttaca tcaacgtgtt acggtagaaa
      361 tactcatcag tcagataatg accataccgt aattctaccg cacggtcgcc gtacgtgtag
      421 gaaatcctgt cgactcgtaa caaaggctgt tccgcaccaa tatcaagcaa atctgcaaca
      481 tcggctggcg caccaaccgc gcgcaaacgt tcgtcggctc ggaccatgct cacaccgaag
      541 cgtgactcaa gtaaaccata gaggggccct tcgttttcag ttagtagcgc catggtcaga
      601 cccttgaaca tcaccgcggg cagataaata tcatcgatga cggttggttg acctcgaaag
      661 cgcagtaggc gccggatgta aatcacccca tcaccgctac gcaggtcaag ggcgctagct
      721 gtatcagcac tggctttgat tttgcgacac cagagaattt cgctctcagc gggcaccggc
      781 tggccgtcac ttggtgcgag tcgcagaaat cgaaagcgca ccactggctc ttgatgggtg
      841 gcaacaaagg tgcccttgcc ctggcgacga atcagaatgt gttcgctggc gagttcatcg
      901 atggctttgc gcactgtgcc ttgactgaca tgaaaccgcc gcgctagctc gaactcgctg
      961 ggtatagatt cgcctggctt ccactcccct ttctctaggg cttgcaacag caattggcga
     1021 atctgctggt agagcgggct aaacgatgcc gcctgctccc gtctggcagg tgccactgct
     1081 tgggcgaggc tctcgttgtt atccatgaca ctgttgtgga cgctgaaaat gcgattgtcc
     1141 cacaggagag ccacaattac cagaattctt atgtcttata taagatataa gactattgac
     1201 gcaggcctca ctctctttta atatctacgg gattgtccct aacccctgtt ttcaaaaggg
     1261 ctaaacttca aatggtactg acacggtatg tcagcccaac tgtttcaacc agtcaccaag
     1321 acggagatcg cactatgacc aaacctgcaa tgcgcgttgc agtcacaggt gccgcaggcc
     1381 aaatcggcta cgccctgctt ttcagaatcg cttccgggga aatgctaggc aaagatcaac
     1441 ccgtgatctt gcaactactc gaaatccctg acgaaaaagc ccagaacgcc ctcaaaggcg
     1501 tgatgatgga actcgacgac tgcgcctttc ctctactgca atccatgtca gctcatagcg
     1561 atcccaaaga agcctttaaa gacgctgatg tggctttgct cgttggctca cgcccacgcg
     1621 gccccggtat ggagcgcaaa gacctcttaa ccgtcaatgc tcaaattttc acggtgcagg
     1681 ggcaagcgct taatgagacc gctagtcgcg atgttcgcgt attggtggtg ggtaaccccg
     1741 ccaacaccaa cgcctacatc gccatgaagt cggcaccaga cttaaagcca gaaaacttca
     1801 ccgcgatgct gcgtttggat cacaaccgtg cattgtcaca gttggccacc aaactcggtc
     1861 gccctgttgc tgacattcag aaactcgccg tttggggcaa ccactcgcca accatgtacc
     1921 ctgactatcg ctatgccact attggcggtc aaagcgtcgc taagatcatc aatgatgatg
     1981 cctggaatcg cgacgtcttc atcccaacgg tgggcaagcg cggcgcggcc atcatcgagg
     2041 cacgcggcct ttcctcggca gcatcagcag ccaacgcagc cattgatcac atccacgact
     2101 gggttatggg taccgatggc aaatgggtca cgatgggcat cccgtctgac ggctcttatg
     2161 gcatcccaga aggcgtgatg tacggtgtgc ccgtgacatg cgaaggcggt caatatcacc
     2221 gtattaccgg cctggagatc gatgagtttt cacgcgagcg catggatctg acgctcaaag
     2281 aactgctcga agagcgcgac ggcgtggccg accttctcaa ataaaaagac ggctcaaggc
     2341 ctgcatctgc aggccttgct gctgccattg ctacctcaaa ggagacttaa atgacacaaa
     2401 cccaatcagc tggtgcacgt tttagggccg cgctcaaaga agagtcaccc ttgcaaatta
     2461 tcggtgctat caacgccaac catgcgttac tggctaaacg tgctggctac cgtgccattt
     2521 acctctctgg tggtggtgtg gccgcgggat cactcgggct gcctgacttg ggcatcaaca
     2581 cgctcgatga tgtgctaacc gatgtgcgtc gtattaccga cgtgtgcgat gtccctctac
     2641 tcgtggacat tgacacaggc tttggtcctt ctgcttttaa catttcacgt accgtcaaaa
     2701 gcctgatcaa atttggtgcg gctgcctgcc acatcgaaga ccaggttggc gccaagcgtt
     2761 gcggccatcg cccgggcaag gaaattgttt caaccgaaga aatgcgtgac cgcgtcaaag
     2821 ccgcagctga tgcgcgcaca gacgagaact tttacttaat tgcgcgtacc gacgcgatcg
     2881 cggttcaggg tgttgatgcc gccatcgaac gtggcttggc ttgtgtcgaa gccggcgctg
     2941 acgccatctt tgccgaagcc gcttatgact taccgaccta cgaaaagttt gtcaaagccg
     3001 tgggcgtgcc tgtattggcg aacatcaccg aattcggtaa gacgccgcta tttaccgttg
     3061 aggaattgcg ctccgtcaat gttggcatgg tgctgtatcc gctgtcagca tttcgcgcca
     3121 tgaacaaagc cgcagaaacg gtctacgaga ccatccgtcg cgatggccac caaaagaacg
     3181 tggtcgacat gatgcaaacc cgcgatgagc tgtacgaccg tatcggttat cacgagtacg
     3241 aacaaaagct agacgctctt tttacgcagt ccaaatctta agaatctgat ttcgccacaa
     3301 ggagttcgca tggccaccac ccgtaaaact gccaccaaaa aaaccgttga gcagcctacg
     3361 tccgcaccga aaccaaagaa atccgtcgcg ctgtccggcg ttattgccgg caacacggca
     3421 ctgtgtacgg tcggacgtac gggcaacgat ctacattacc gaggctacga cattctcgac
     3481 ttcgctgatg tctgcgagtt tgaggaaatt gcgcacctgc tgatccacgg caaattgccc
     3541 accaaatccg agctagtcgc ctacaaagaa aaactcaagg ccatgagcga cttacccgca
     3601 caattgcagg ccgcgcttga agcactacct gcctcaagcc acccgatgga cgtcatgcgc
     3661 acagcaacct ctgtgttggg ttgtgtgctg cctgagaaag atgaccacaa catccccggt
     3721 gcacgtgaca tcgctgatcg tctgatggca tgccttggct cagccctgct ctactggtat
     3781 cactacagtc acaacggtcg catcattgat gtgcagaccg acgatgacag catcggcgga
     3841 catttcttgc acctcttgca tggcaaaaca cctgatcagg attgggtgcg tgcgatgcac
     3901 acctccctga tcctgtatgc agagcacgag ttcaacgcct caacatttac tagccgagtg
     3961 attgctggca caggctcaga catgtactca gcgatcactg gtggcattgg tgcgctgcgt
     4021 ggccccaagc atggtggcgc caacgaagtg gcctttgaag tgcaaaagcg ttacgagacg
     4081 cctgatgagg cagaggcaga catccgtcgt cgcgtcgaaa acaaagaggt cgtcattggc
     4141 tttggccatc cggtctacac catcgccgac ccgcgcaatg aagtgattaa gtccgttgct
     4201 cagcgcctgt caaagaaggc caacaatatg aagatgtaca acattgccga gcgtcttgaa
     4261 acggtgatgt gggatgtgaa aaaaatgttc ccgaaccttg actggttctc ggccgtttcg
     4321 tatcacatga tgggtgtgcc aacggccatg ttcaccccgt tgttcgtgat cgcgcgcacc
     4381 gcaggttggt cggcacacat cattgaacag cgcgtagaca acaagatcat ccgcccaaca
     4441 gccaattacg tgggtccaga gaactt
//
LOCUS       DATBNL010000331         2263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73736, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000331 DATBNL010000000
VERSION     DATBNL010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73736"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VIC30_05610"
     CDS             complement(<1..392)
                     /locus_tag="VIC30_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017234374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7803893.1"
                     /translation="MITAADSRIPAPGARIAVVGAGIAGLASAWLLANRYHVTLFEAG
                     SYFGGHSNTVDVTLEGKTHPVDTGFLVHNDLTYPNLIALFELLGVPVHESDMSFGVSI
                     DEPDIEWAGTNLGTVFAQKSNLVKPALLG"
     gene            complement(389..916)
                     /locus_tag="VIC30_05615"
     CDS             complement(389..916)
                     /locus_tag="VIC30_05615"
                     /inference="COORDINATES: protein motif:HMM:NF027363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016872 - intramolecular lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chalcone isomerase family protein"
                     /protein_id="HEY7803894.1"
                     /translation="MPVSATFDDASKIAALPQALEAQFPGHWQVHGQGLFTWSVFRVY
                     RAALHVQGDGFDTAAPCASAEPFALDLNYLRNVSADQIVQTSIQEMRRLREPDEAALA
                     QWGEQLQAILPDVGLGDRLVGVFVPGKGVSFFGREAALGQIDDPAFAEAFAAVWLDAQ
                     TRAPALRANLLGLSV"
     gene            1178..1801
                     /locus_tag="VIC30_05620"
     CDS             1178..1801
                     /locus_tag="VIC30_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013538636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7803895.1"
                     /translation="MANPQKLSFKEQQHKFREDAILDTVNRLLAQKGYDLMTMDEVAA
                     EVGIAKASLYKHFDSKEALAAASMTRFIEDAVAMAQGQPAHLPAVDKLKGVVRWAVRI
                     HLSGTMPSLPSTRSSIQQTLLEHQPYVEQLGALTELLGVWIGQAQEAGDLSPALPGEV
                     ILYTIYARSCDPVADFLKAGGAFSDDDIVELLVHTCFEGMTKAPGCL"
     gene            1892..>2263
                     /gene="rdgC"
                     /locus_tag="VIC30_05625"
     CDS             1892..>2263
                     /gene="rdgC"
                     /locus_tag="VIC30_05625"
                     /inference="COORDINATES: protein motif:HMM:NF016281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEY7803896.1"
                     /translation="MWFKNLKVFRLAEHWANNMADLDEALKADAFAPADDISAVSTGW
                     VPPRDDDERFAVDVQGQWLAAFRIEKKLLPSTVINQTVKARAQVIEEEQGYTPGRKQL
                     RDLKEAVTDELLPRAFSVARDV"
BASE COUNT          565 a          625 c          600 g          473 t
ORIGIN      
        1 ccgagaagcg caggcttcac aaggttggat ttctgggcaa acaccgtacc gaggttggtg
       61 cccgcccatt caatgtcggg ctcatcaata gacacgccaa acgacatgtc gctttcatgc
      121 acgggtacgc caagcaactc aaatagtgca atcaggttgg gatacgtcag gtcgttgtgc
      181 accaaaaacc cggtatcgac cggatgggtt ttaccctcaa gcgtcacgtc tactgtattg
      241 gaatgcccgc cgaaataact gccagcctca aacaaggtga cgtggtagcg gttagccaac
      301 aaccacgcac tggccaagcc ggcgatgccc gcaccaacga cggcgatgcg cgcaccaggc
      361 gcggggatgc gtgagtccgc cgccgttatc ataccgagag acccaataag ttggcgcgca
      421 gtgccggtgc gcgtgtttgc gcatctagcc aaacagcagc aaacgcctcg gcaaacgccg
      481 ggtcatcgat ttgccccaag gccgcctcgc gcccaaaaaa tgacaccccc ttacctggca
      541 caaacacacc aaccaggcgg tcgccaagcc caacatcagg caagatggct tgcaactgct
      601 caccccactg cgccagggca gcttcatctg gctcgcgcaa gcggcgcatt tcctgtatcg
      661 acgtctgcac aatctgatca gccgatacat tacgcagata gttcaaatcc agtgcgaagg
      721 gctcggccga tgcacagggt gcggccgtat caaacccgtc accttgcacg tgcaatgccg
      781 cgcggtacac gcgaaacacg ctccaggtaa atagcccttg gccatgcacc tgccagtggc
      841 cgggaaactg tgcctccagc gcttgcggca aggctgcaat cttagaggca tcgtcaaatg
      901 tggcagatac gggcataatg gttatcaact tgaaggttat aaagtgactc tttggtcatt
      961 acttggacgg cattactgca aggactatca ataagtttct tacaccaaag tgactactga
     1021 gaatacaatt gaaacgaatt ggtttaataa aaatactgat tagtaacttt ctgaactgat
     1081 tagataccag atttgggttt gacgcaatag cggcaaacca ctgcaataaa acactgcaat
     1141 aaatcactgc ttaaaaaaac tgaggaaacg ttttgtgatg gcaaacccac aaaagctctc
     1201 attcaaagaa caacagcaca agtttcgtga agacgccatt ctcgatacgg ttaatcgtct
     1261 gctcgcgcaa aagggctatg acttgatgac catggacgag gtggccgccg aagtcggcat
     1321 cgccaaggca agcctataca agcacttcga ttccaaggag gcattggctg cagcctcgat
     1381 gacgcgcttt attgaagacg ctgtggccat ggcacaaggt caacccgcac acttacctgc
     1441 cgtggacaaa ctcaagggcg tggtgcgttg ggcggtccgt attcatctgt caggcaccat
     1501 gccatcgctg ccctcaactc ggtcaagcat tcaacagact ttgcttgagc atcagcccta
     1561 tgttgaacag ctcggggcac tgacagaatt gctcggcgtc tggattggcc aggcccaaga
     1621 ggctggcgac ctgtcgccag ccctgccagg cgaagtcatt ctctacacca tctacgcccg
     1681 ctcctgtgac ccggtggccg atttcctcaa ggctggcggc gcctttagcg atgacgacat
     1741 tgttgagctg ctagtgcaca cctgttttga ggggatgaca aaggccccgg gctgtctcta
     1801 acacggtctc caacgggacg gctgggctca cgctacactg ccgacttgtt gatttttttg
     1861 tttggcgctg cgtcaaactc gggatggtgg catgtggttt aagaacctga aagtatttcg
     1921 tctggccgaa cattgggcca acaacatggc tgacttggat gaggcattaa aagccgacgc
     1981 ctttgcgccg gctgacgaca tctcagcggt atcaacaggc tgggtgccgc cgcgcgatga
     2041 tgatgagcgc tttgccgttg acgtacaagg tcagtggttg gccgcatttc ggatcgagaa
     2101 aaaactcttg ccctcaacgg tgattaacca gacggttaag gcgcgtgcgc aagtcattga
     2161 agaagaacag ggctacaccc ctggacgcaa acagctacgt gatttaaaag aagccgtgac
     2221 tgacgagttg ctgccacgtg cctttagtgt ggcgcgggac gta
//
LOCUS       DATBNL010000332         2551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_163772, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000332 DATBNL010000000
VERSION     DATBNL010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163772"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VIC30_05630"
     CDS             <1..304
                     /locus_tag="VIC30_05630"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004627089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEY7803897.1"
                     /translation="VPASQTVLKRAGLSIEQIDVIEANEAFAAQACAVSKELGLDPEK
                     VNPNGSGISLGHPIGATGAIITVKALHELHRTGGRYALVTMCIGGGQGIAAIFERA"
     gene            complement(349..1026)
                     /gene="radC"
                     /locus_tag="VIC30_05635"
     CDS             complement(349..1026)
                     /gene="radC"
                     /locus_tag="VIC30_05635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEY7803898.1"
                     /translation="MTLRESLTPEERPRERLAKFGAKALTDAELIALMLGSGLRGRTA
                     IGVAADLLNQCGGLRGLQRQSIKTLRQYKGLGPARASVLAACFELAERTSLSELKARP
                     SIEHPGQIADYCRVLLTNKSVEHCVAVLLDVQNQVIDCKILSCGTLTEAAVYPREVVK
                     LALEYHASSLILAHNHPSGTPEPSPGDITMTQTLAEALALVDVTLLDHIIVAGPRTLS
                     IREMGHM"
     gene            1107..1568
                     /locus_tag="VIC30_05640"
     CDS             1107..1568
                     /locus_tag="VIC30_05640"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005019191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEY7803899.1"
                     /translation="MTNLPTVREDSYLTLHYRIVIESGPGAGSVFIDTFDGRPATLQL
                     GVGQWAPGMEQALIGRAEGDCFSLQLEAEQAYGDRNPELVQRVSRQMLNEHAGEDADF
                     EAGDMVSFTAPNGGQYSGVFKEMDDTGAVFDFNRPLAGRQLRVDIDLLGVI"
     gene            1568..2542
                     /gene="ispH"
                     /locus_tag="VIC30_05645"
                     /gene_synonym="lytB"
     CDS             1568..2542
                     /gene="ispH"
                     /locus_tag="VIC30_05645"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEY7803900.1"
                     /translation="MSGQQTQAVDSPAVEVILAQPRGFCAGVDRAIEIVERALQVHGA
                     PVYVRHEIVHNKFVVQDLRAKGAVFVKELDEIPPDAMVVFSAHGVSRQVQDEAKTRGF
                     RVFDATCPLVTKVHVEVAKMRAAGLEVIMIGHQGHPEVEGTLGQSSEGMHLVETVADV
                     EQLQVVNPEKLAFVTQTTLSVDDAAVVADALRQRFPGIQEPKKSDICYATQNRQDAVK
                     LMSQQCDLVLVVGSANSSNSNRLREVAARLGVDAYLIDGPEAIEPQWLVDKQHVGITA
                     GASAPEVLVQDVVARLKSLGAISVRTMDGLQENVSFPLPKGLSTKSVA"
BASE COUNT          543 a          638 c          767 g          603 t
ORIGIN      
        1 agtgcctgcc tcacaaacgg ttcttaagcg tgcgggcttg agcattgagc agatcgacgt
       61 cattgaagcc aatgaagcgt tcgcggctca agcttgcgcc gtttccaaag agctgggctt
      121 agatcccgag aaggtcaacc ccaacggtag cggcatttcg cttggtcatc caattggtgc
      181 caccggcgcc atcatcacgg tcaaagcttt gcatgagttg catcgaacgg gcggtcgtta
      241 tgcgttggtg accatgtgta tcggtggtgg tcaaggcatt gctgccattt ttgagcgggc
      301 ttgatccagc gcctcaattt gtgctgatgt aatgcccttc gtaggccctc acatgtgacc
      361 catttctcga atggatagcg tgcgagggcc tgccacaatg atgtgatcga gcagggttac
      421 atcgactaaa gcaagtgcct cggccaacgt ttgcgtcatg gtgatgtcac ctgggctggg
      481 ttcaggggtg ccagatgggt ggttatgcgc caagatcagg ctgctggcgt gatactcaag
      541 cgccagtttg accacttcac gcgggtagac cgcggcctcg gttagcgtgc cacacgaaag
      601 aatcttgcaa tcgataacct ggttctgaac atcaagcaaa acagcgacac agtgttcaac
      661 ggacttgttg gtcagaagca cccggcagta gtcggctatt tggccagggt gctcgatgct
      721 aggtctggcc ttgagttcag acaggctggt gcgttcggcc aattcaaaac aggctgccaa
      781 cacactggcg cgtgctggcc ccaacccttt gtattgcctc aaggttttga tggactgacg
      841 ttgtaagccg cgcaaaccgc cgcattggtt gagtaagtct gctgccacgc caatggcggt
      901 tcgaccgcgt aggccactgc caagcatgag cgcgatgagc tcagcgtcgg ttaatgcttt
      961 ggccccgaat tttgcgagcc gttctcgtgg gcgttcctct ggggtcaggc tttcacgcaa
     1021 agtcatggat gaacctctaa aatcacggac tgctttgatt ggcaacgtgg tattttgatt
     1081 gaacttaaga gctagcgaac gcacccatga caaatttgcc caccgtccgt gaggactcat
     1141 acttaacgtt gcactatcgc atcgtgattg aaagcggccc tggcgctggt tcagtattta
     1201 tcgacacgtt tgacggccga ccggcaaccc ttcagcttgg cgttggtcag tgggcgccgg
     1261 gcatggagca ggctttgatt gggcgcgctg agggcgactg tttcagcttg caactcgaag
     1321 ccgagcaagc ttacggcgac cgtaaccctg aattggtaca acgtgtcagt cgtcagatgc
     1381 ttaacgaaca tgccggcgag gatgccgatt tcgaggctgg cgacatggtt tcctttacgg
     1441 cacctaacgg cggccagtat tctggtgtct ttaaagaaat ggacgatacc ggtgcggtgt
     1501 ttgatttcaa ccgcccgctt gcgggccggc aactgcgtgt cgatattgat ttgttgggag
     1561 tgatctgatg agcggtcagc aaacacaggc agtggattcg cccgccgtcg aggtgatatt
     1621 ggcacagccc cgcgggtttt gtgcgggggt ggatcgtgcc attgaaatcg tcgagcgcgc
     1681 gctacaagtc catggtgcgc cggtatatgt gcgccatgag attgtgcaca acaaatttgt
     1741 ggtgcaggat ctgcgcgcca agggggcggt gtttgttaaa gagctcgatg aaatcccccc
     1801 tgacgcaatg gtggtgtttt ctgcgcatgg tgtttctagg caggtacagg acgaggccaa
     1861 aacacggggc tttcgagtgt tcgatgccac gtgtccactg gttaccaagg tgcacgtcga
     1921 ggtcgctaaa atgcgcgcgg ccgggctcga agtgatcatg atcggccatc aagggcatcc
     1981 tgaggttgag ggcacactcg gtcaatctag tgagggcatg cacttggtcg agacggtggc
     2041 tgacgttgag cagctgcaag tggttaaccc agagaaactg gcgtttgtga cccaaaccac
     2101 gctatcagtc gatgatgctg ctgtcgtggc cgatgcgtta aggcagcgtt tccctggcat
     2161 acaggaacct aaaaagagtg acatttgtta cgccacacaa aaccgccaag atgctgtcaa
     2221 gctcatgagt cagcagtgcg atttggtatt ggttgttggt agtgccaaca gttcgaactc
     2281 gaatcgctta cgcgaggtag cggctaggct cggtgttgac gcttacctca ttgatggacc
     2341 agaagcgatt gagccacagt ggctagtgga taaacaacat gtgggtatca ccgctggggc
     2401 atcggcaccc gaggtgctcg tgcaagatgt ggtggcgcgc ctgaaatcgt tgggcgccat
     2461 ttctgttcgc accatggatg gcctacaaga aaacgtctcg tttccattgc ccaagggtct
     2521 gagcacgaag tctgtcgctt aggcgctcaa t
//
LOCUS       DATBNL010000333         3065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73769, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000333 DATBNL010000000
VERSION     DATBNL010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73769"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /gene="mutL"
                     /locus_tag="VIC30_05650"
     CDS             <1..263
                     /gene="mutL"
                     /locus_tag="VIC30_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929705.1"
                     /note="This protein is involved in the repair of
                     mismatches in DNA. It is required for dam-dependent
                     methyl-directed DNA mismatch repair. Promotes the
                     formation of a stable complex between two or more
                     DNA-binding proteins in an ATP-dependent manner without
                     itself being part of a final effector complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HEY7803901.1"
                     /translation="SLVRGILHDMAEVGVSALLTEQRNQLLSTMACHGAVRANRQLTI
                     AEMNALLRQMEQTERADQCNHGRPTWLSWRLADLDRLFMRGQ"
     gene            260..1198
                     /gene="miaA"
                     /locus_tag="VIC30_05655"
     CDS             260..1198
                     /gene="miaA"
                     /locus_tag="VIC30_05655"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEY7803902.1"
                     /translation="MNADDLPLLCLAGPTAAGKSAVCQVLADHLPIEIINVDSATIYR
                     GMDIGTAKPSATEQASVTHHLLDILDPAQSYSAAQFRRDALRCVMQIRARGRLPLLAG
                     GTMLYFKVLRDGIDDLPDADPQCRADISARAQALGWPALHQALAKVDSVTAARLAPND
                     SQRIGRALEIYEMSGQPMSALIGRQTDTGMPMKLISLEPSDRQVLHDRIERRFDQMLA
                     HGLVHEVRQLFERGDLTPELPSMRCVGYRQIWQHLAGQSSLTEAREQGIAATRQLAKR
                     QLTWLRSMPDRHVVDSLAADAGSQVLAQVQTILATS"
     gene            complement(1244..2293)
                     /gene="purM"
                     /locus_tag="VIC30_05660"
     CDS             complement(1244..2293)
                     /gene="purM"
                     /locus_tag="VIC30_05660"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEY7803903.1"
                     /translation="MTQPSNTPLTYRDAGVDIDAGEALIDRIKPLAAKTMREGVMAGI
                     GGFGALFEVPKRYQEPVLVSGTDGVGTKLRLAFDWQRHDTVGVDLVAMSVNDILVQGA
                     EPLFFLDYFACGRLSVDVAASVVGGIAKGCELAGCALIGGETAEMPGMYPDGEYDLAG
                     FAVGAVEKARIIDGKSIAAGDMVLGLASSGAHSNGYSLLRKVLERTNAKPEDRFENGT
                     LGDAVMAPTRIYVKQVLAALAQFGPAIKGLAHITGGGLLDNVPRILQPGMQAQLNASA
                     WPMPALFEWLQQAGGIDSQEMYRVFNCGIGMVLVVDAEQASAITTFLAEQGEQVYTLG
                     RIQACDSHAAQTVVI"
     gene            2281..>3065
                     /locus_tag="VIC30_05665"
     CDS             2281..>3065
                     /locus_tag="VIC30_05665"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEY7803904.1"
                     /translation="MVGSWGKRRAYLNKRNVNQKRESPKVVFAAQCVTMAKLQPQIAI
                     LRLERMAQQLILDILPSPDPTLQNMVPGGNGALIAAIQTLLPGHTLYAWGPDGSGRTH
                     LLRASCAFHGGIYIDTNAATHNIQALIESMVAGHGIACVAVDDVQTLDDSGLAALFGL
                     YNRWRECAGGADAFRLLVAGDRAPLQMPCREDVRTRLGWGAVYRLEPLSDDEKFDALM
                     HHAKARGMPLSEDVLRWLLTHGSRDIRALFAALDALDRYALAN"
BASE COUNT          689 a          916 c          829 g          631 t
ORIGIN      
        1 ggtcattggt gcgtgggatc ctgcatgaca tggctgaagt gggcgtaagc gcattgctga
       61 ccgaacaacg caaccaactg ctctcgacca tggcctgcca cggtgcggtg cgcgccaatc
      121 gccagctcac cattgccgaa atgaatgccc tgttgcgcca aatggagcaa acagaacgtg
      181 ccgatcagtg caaccacggt cgcccaacct ggttgtcttg gcgactcgct gaccttgacc
      241 gtctgttcat gcgcggccaa tgaacgcaga tgacctacct ctgctctgcc tagctggccc
      301 cacagcggcc ggcaaaagcg ctgtttgtca ggtgctggca gatcatttac ccattgaaat
      361 catcaatgtc gattcggcca ccatctaccg cggcatggat attggcacag ccaaaccgag
      421 cgccacagaa caagcatcgg tgacgcatca cttactcgat atcctagacc cagcacaaag
      481 ctattcagcg gcgcagtttc gccgcgatgc actgcgctgt gtaatgcaaa tccgtgcgcg
      541 cggccgtctg cccttgctgg ccggtggcac catgctgtat ttcaaagtgt tgcgcgacgg
      601 cattgatgat ttgcccgatg ctgacccgca atgccgggca gacatctcgg cgcgcgcgca
      661 ggcacttggc tggcccgctc tgcatcaagc gctcgcaaag gtggactccg tcacggcggc
      721 aagactcgca cccaatgaca gtcaacgcat cggccgggcc ctagagattt atgaaatgag
      781 cgggcaaccc atgtctgccc tgatcggtcg tcagaccgat acaggcatgc ccatgaagtt
      841 aattagccta gagcccagcg accgccaggt cctgcacgac cggatagaga ggcgctttga
      901 tcaaatgctg gcacacggat tggtgcacga ggtgcgccaa ctctttgagc gcggtgacct
      961 aacccctgaa ctgccttcga tgcggtgtgt cggttaccgt caaatctggc aacacttggc
     1021 aggtcaatcc tcgttgaccg aggcgcgaga acaaggcatt gctgccacgc ggcaattggc
     1081 taaacgacag ctgacttggc ttagaagcat gcccgatcgc cacgtggttg acagccttgc
     1141 ggccgatgct ggtagccaag tgctagcgca ggtccagacc atcttggcta caagctagct
     1201 ttctgagcac gaccaacaaa acaccttggc tacagagatc tcactagatc acaacggttt
     1261 gtgccgcatg tgaatcacaa gcttggatcc gacccaacgt atagacctgt tcaccttgct
     1321 cagccaagaa tgttgtaatt gcgctggctt gctcggcatc gaccacaagc accatgccaa
     1381 tgccgcagtt aaagacccga tacatttcct ggctatcgat gccgccggct tgctgcagcc
     1441 attcaaagag cgccggcatt ggccaagcgc tcgcgttcaa ctgcgcctgc ataccaggct
     1501 gaaggatacg tggcacattg tccagcaagc caccgcctgt gatgtgcgcc aggcctttga
     1561 tcgccggacc aaactgcgcc aacgccgcca atacctgttt gacataaatg cgcgtgggcg
     1621 ccatcacagc atcgccaagc gtgccgttct caaatcgatc ttcaggcttg gcgttggtgc
     1681 gttcgagcac tttgcgcaat aacgagtacc catttgaatg tgcgccactt gaagccaaac
     1741 caagcaccat gtcgcccgcg gcaatggact tgccatcaat aatgcgggct ttctcgacag
     1801 cgcccacggc aaaaccggcc agatcgtatt caccatcggg atacatgcct ggcatttcag
     1861 ctgtttcgcc cccaataagc gcacaaccgg caagctcaca gcctttggca atgccgccca
     1921 ccacgcttgc ggccacgtca accgacaacc gaccgcaggc gaagtagtcc aaaaagaaca
     1981 agggctcagc accttgcacc aagatgtcgt taacactcat ggccactaaa tcgacaccca
     2041 cggtgtcgtg acgctgccag tcaaaggcca accgcagttt ggtgcccacc ccgtcggtgc
     2101 ctgacaccaa cacgggctct tggtagcgtt tgggcacttc aaacaacgca ccaaagccac
     2161 caatgccagc catgacgcct tcgcgcatgg ttttagcggc cagtggcttg atacggtcaa
     2221 ttagcgcttc accagcatcg atatcaacgc cggcgtcgcg gtaggtcaaa ggggtattag
     2281 atggttgggt catggggtaa gcgtcgagcc tatttaaata aaagaaacgt gaatcagaag
     2341 cgtgagtcgc ccaaagtggt gtttgccgca caatgtgtga caatggcgaa gttacaacca
     2401 caaatcgcta ttctacgact tgagcgcatg gcgcagcagc tgattctcga tattctgccc
     2461 tcgcctgacc ccaccctgca aaacatggtg cctggcggca acggtgcatt gatcgccgcg
     2521 atccagacat tattgcctgg gcacaccctc tatgcatggg gacctgacgg tagcggccgc
     2581 acacatttgt tgcgagccag ctgtgcattt catggtggca tctacatcga cacaaatgca
     2641 gcaactcaca acatacaagc actgatagag tccatggtgg ccggtcacgg cattgcatgc
     2701 gtggccgttg atgacgtcca gacgctcgat gacagcggcc ttgcggcctt gtttggcttg
     2761 tacaatcggt ggcgcgagtg cgcgggcggc gcagatgcct tccggctttt agtggcgggt
     2821 gaccgagcac cactgcagat gccttgccgg gaggacgttc gcacccggct gggctggggt
     2881 gctgtttatc ggctggaacc cttgtctgac gatgaaaagt ttgacgcgct catgcaccat
     2941 gctaaggctc gaggcatgcc attgtcagaa gacgtcttgc gctggctact aacccatggg
     3001 tcgcgcgata ttcgggcctt gtttgctgcg cttgatgcat tggatcgcta tgcactggct
     3061 aacca
//
LOCUS       DATBNL010000334         3742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_84016, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000334 DATBNL010000000
VERSION     DATBNL010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3742
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84016"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VIC30_05670"
     CDS             complement(<1..184)
                     /locus_tag="VIC30_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012745943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase"
                     /protein_id="HEY7803905.1"
                     /translation="MKLVRYGAPGKEKPGLIDADGKVRDLSGKIKDIGPEQLSPAGLA
                     KLAKIKPESLPLVRGKP"
     gene            complement(308..1057)
                     /locus_tag="VIC30_05675"
     CDS             complement(308..1057)
                     /locus_tag="VIC30_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009552284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7803906.1"
                     /translation="MRLTGKTIIITAAGQGIGRASALAMAREGATVWATDVNADLLSA
                     FDSMANINTASLNVLNTAEINALAEKIGSVDVLFNCAGYVHQGDIMQTNDEQWDFSMD
                     LNVKSMYRTIRAFLPGMLANGNGSVINMASAASSIKGAPNRVVYAASKAAVLGLTRAL
                     AADYVARGVRFNAICPGTVESPSLGERIQAVSKDTGKSVDEARNMFVSRQPMGRLGTA
                     DEIAALAVYLASDESSFTTGTSQIIDGGWSL"
     gene            complement(1191..2258)
                     /locus_tag="VIC30_05680"
     CDS             complement(1191..2258)
                     /locus_tag="VIC30_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019652402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEY7803907.1"
                     /translation="MDASARAAFNADELQSLATELLIRAGLDTAMAATVASTLIEGDL
                     LGHDTHGLALLPGYLKELQSGAMTPKGSYTVIADKPAAAVWDGERLPGPWLIEQGLDM
                     LMPRARELGVASLAIRRSHHIACLAVYLMRAAKEGFLMVLASSDANSASVAPYGGTRA
                     VFTPNPIAIGYPCSSGDVLIDISASITTNGMSNRKAAAGQRFEENWLMDAQGNPSNDP
                     AVFSEDPPGTILPIGGLTYGHKGYGLALMIEALTGGLAGFGRADPKQGWGATVHITLY
                     DIASFAGQTDFLRQMDEIADQCINNPPRPGVSKVRLPGQGGLAKRDEQLQSGVRLHPD
                     IAKGLVGFCDQYGKVWPTPIG"
     gene            complement(2415..3182)
                     /locus_tag="VIC30_05685"
     CDS             complement(2415..3182)
                     /locus_tag="VIC30_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019140329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803908.1"
                     /translation="MARAAQYDFSDKHAVVTGGAAGIGHAIVERLLDGGASVTIFDRD
                     TDALAAAKAALGQRVHTAKVDVADEQSVVAAVKSAQEFQAHIDILVNSAGITGPNTTV
                     IEYPVDEWNRVFDINTRGTFLTCKHIAPVMKAADKGQGYGRIVNIASIAGKEGNPNAS
                     AYSASKAAVISLTKSLGKELSATGIRVNCITPAAVKTGMFDQMTQQHIDFMLSKIPMN
                     RFGTVQEMANLVAWLASDECSFSTGAVFDISGGRATY"
     gene            3441..>3742
                     /locus_tag="VIC30_05690"
     CDS             3441..>3742
                     /locus_tag="VIC30_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017453010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HEY7803909.1"
                     /translation="MKVLITDFDFPDLDLEQGMFRDAGIEVKTAQCKTEADVIAAGQD
                     ADALLIQYAPVNEQVFAALPNIKIASRYGAGFDTINTDDAKAHGVWVCNSPDYGMH"
BASE COUNT          860 a          979 c         1011 g          892 t
ORIGIN      
        1 gcggtttgcc gcgaaccaag ggtagcgact cgggcttgat cttggccagc ttggcaaggc
       61 cagcaggcga gagttgttcg gggccgatat ctttgatctt gccagacagg tcacgcactt
      121 tgccatcggc gtcaatcaag ccgggttttt ctttgccggg ggcaccatat cgaacgagtt
      181 tcacgggatc tccttgcgtc tgtattaaaa agtgttgtta ctgcaaaatt acgtcggtgg
      241 cgctgtcatt agggtctggg tcgtagcttt cgcctttggc cttttactat tagcgctggc
      301 ttcgatctta cagcgaccac ccgccatcga taatttgcga agtgccagtg gtaaagcttg
      361 actcgtctga agccagatag accgcaaggg cggcaatttc atcggccgtg ccaagccggc
      421 ccatgggttg gcgtgacaca aacatattgc gcgcctcatc aaccgattta ccagtatctt
      481 tggagacagc ctgaatgcgt tcgccaagcg atggtgactc gactgtgcct gggcaaatcg
      541 cgttaaaacg aacgcctcgc gccacgtagt ccgctgccaa ggcacgcgtt aaaccaagca
      601 ccgctgcttt cgaggcggca tagaccaccc ggttgggggc acctttgatg ctagaggcgg
      661 cagaagccat attgatcaca ctgccgttac cattggcgag catgcccggt aaaaatgcgc
      721 ggatggtgcg atacatggac ttcacattca agtccatgct gaagtcccat tgctcatcat
      781 tggtttgcat gatgtcaccc tgatgaacgt agcccgcaca gttaaagagt acgtcgacgg
      841 agccaatttt ttcagctaag gcattgatct ctgcggtgtt caggacattt aatgaggcag
      901 tattgatatt ggccatcgaa tcaaaggcac tgagcaaatc ggcattcacg tcggtggccc
      961 aaacggtggc gccttcacgg gccatggcca acgccgaggc ccgaccaatg ccttggccgg
     1021 ctgcggtgat gatgatggtt ttgcctgtca ggcgcatgac gaagtcctcc gtaagcatgt
     1081 agtcataaat tcggtaaaaa ttggtctgac caatctatca gagcgcaagc caaaatccag
     1141 tggtgcaaac cctgtattgt gctttgacgg cgctttaaat tccctagccg ctagccgatc
     1201 ggtgtgggcc acactttccc atattgatca caaaacccaa ccaaaccctt ggcgatatct
     1261 gggtgtaagc gcacgcctga ttggagttgc tcatcgcgct tggctagccc gccttggcca
     1321 ggcaacctga ctttgcttac accggggcgc ggtgggttat tgatgcattg gtcagcgatc
     1381 tcatccattt gccgcaaaaa gtctgtctgc ccagcaaagg aggcaatgtc gtagagcgtg
     1441 atgtgtacgg ttgcacccca gccttgtttg ggatcagctc gcccaaagcc ggctaaccca
     1501 ccagttaaag cctcaatcat aagtgccaag ccgtagcctt tgtggccata ggtcaatcca
     1561 cctatcggca aaatggtacc aggtggatct tcactaaaga ccgcagggtc gttagacgga
     1621 ttgccctggg catccattaa ccagttttcc tcgaatctct ggccagcggc cgctttgcga
     1681 ttactcatgc cgttggtggt gattgaagct gaaatatcaa ttagcacatc accacttgaa
     1741 caagggtatc caatggcaat agggttgggc gtaaataccg cgcgcgtgcc cccgtatggt
     1801 gcgacactgg ctgagttggc atcagagctt gccaacacca tgagaaaccc ctctttggcc
     1861 gcgcgcatca gatagacagc cagacacgca atgtggtgac tgcgtcgaat cgcaagcgat
     1921 gccacgccaa gctcacgcgc tcgtggcatc aacatgtcta ggccttgctc gattaaccac
     1981 ggaccaggca aacgctcgcc atcccagact gctgctgcag gtttgtcggc aatgacggtg
     2041 taactgcctt taggcgtcat agcacccgat tgcagttcct tcaggtaacc gggtagtaag
     2101 gccaaaccat gggtatcgtg acccagaaga tcaccttcga tcagggtgct ggcgacggtg
     2161 gcggccatgg cggtatctag gccggcccgg atgagaagct cggtggccag tgactgaagt
     2221 tcatcggcat taaacgccgc gcgtgcgcta gcatccatgt ctgtccttgt cgtttgctta
     2281 gatttggtta gatttgatta agtgtgatgt ggtgtggggt tgtttggtca gtatcttgcc
     2341 agtcgcattt cgtgactgga taaagattcg agcgtcaaaa cagccaaagg cccaaacagc
     2401 cacacactca tacatcagta tgtggcccga cccccggaga tatcaaacac cgcaccggtg
     2461 ctaaagctgc attcgtctga tgcaagccac gccaccagat tggccatttc ctgaacggtg
     2521 ccaaaccggt tcatcggtat cttggagagc atgaagtcaa tgtgttgctg cgtcatctga
     2581 tcaaacatac cggtcttgac cgccgcgggc gtaatgcagt tgacccgaat gcccgtggca
     2641 ctaagctcct tgcccagtga tttggtcaat gaaatcacgg cagcctttga ggcgctgtag
     2701 gccgaagcgt taggattacc ttctttgccg gcaatcgagg cgatgttgac gatgcggccg
     2761 tagccttggc ccttgtcggc tgccttcatg actggcgcaa tgtgcttaca cgtcagaaac
     2821 gtcccacggg tgttgatatc aaagacgcgg ttccactcat cgaccgggta ctcgatgacg
     2881 gtggtgttgg gcccggtgat cccagcgcta ttgaccaaga tgtcaatgtg ggcctgaaat
     2941 tcttgggcgg acttgactgc cgcgacaacc gattgctcgt cagcgacatc gacctttgcg
     3001 gtgtgaacgc gttggccaag cgcagctttt gcagctgcaa gtgcgtcagt gtctcgatca
     3061 aagatcgtga cactggcacc accgtccaac aatcgttcga caatggcgtg tccaatgccg
     3121 gctgcaccgc ccgtgactac tgcgtgtttg tcagaaaaat cgtattgagc cgcacgtgcc
     3181 atgttgtttg cctctttgtt gtgttctaga gatatcgata aacggactga tactttttag
     3241 gggtttaccc gcttttgctg gtagatcgct tgacaaaatt ggtcagacca attgaactgt
     3301 catcacaaca ttaatcgtgt tgatgtcatt cgtcaacgag agaaatcgag tagaacgagt
     3361 tagcacgcag cacgatccaa acaagaataa gcaggccggt caattaacaa gtcggtcatg
     3421 caagcatgga gacaaatgcc gtgaaggtgc tgattactga ttttgatttt ccggatctag
     3481 atctggagca gggcatgttt cgtgatgccg gcatcgaggt aaaaaccgca caatgcaaga
     3541 ctgaggctga tgtgattgcc gctggccaag acgccgatgc gttactgatt cagtacgccc
     3601 cagttaatga acaggttttt gctgcgctac ctaacataaa gatcgcaagc cgttatggcg
     3661 ctggctttga caccattaac accgatgatg cgaaagccca cggtgtgtgg gtgtgtaatt
     3721 cacccgacta cggcatgcac ga
//
LOCUS       DATBNL010000335         1575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113497, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000335 DATBNL010000000
VERSION     DATBNL010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113497"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..640)
                     /locus_tag="VIC30_05695"
     CDS             complement(<1..640)
                     /locus_tag="VIC30_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803910.1"
                     /translation="MTEPNIVLQATNVSRHFEDGERRVQVLDGVDLSVTAGEMVAIVG
                     ASGSGKSTLLHCLGLLDRPDSGELRIADELTNDLSEKARARLRNAHLGFVYQFHHLLP
                     EFNATDNVAMPLIVGKQPMSQARARARELLAEMGLDHRLDHYPGQLSGGERQRVALAR
                     ALVARPLCVLADEPTGNLDRDTAQQVFDLITRIRDDFGTAVVLVTHDLQLAQR"
     gene            complement(633..>1575)
                     /locus_tag="VIC30_05700"
     CDS             complement(633..>1575)
                     /locus_tag="VIC30_05700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY7803911.1"
                     /translation="AILMRGQALRGVQVRGVDPAMEPEVSELASQMVQGSLLDLTPGS
                     FGLVIGQTLADTLGLSTGDSVMLLAPQGSVSPAGFTPRLRQFTIAGLYRSGHHEYDSS
                     LVFTDTQDAARLFRDTGTAGVRLSIADMHTAPLVAAQLGSYLPRGVLAADWSRNNRTW
                     FAAVQTEKRMMFLILALIVAVAAFNLLSSQVMAVKDKQSDIAILRSLGATPGAIARIF
                     LIQGALIGIVGTALGVGGGALLAYNIDTLVPAIETALGIQFLSPEIYFISSLPSDPRT
                     GDITVIAVTSLVMSLLATLYPSWRASRLEPAQVLRHD"
BASE COUNT          382 a          474 c          416 g          303 t
ORIGIN      
        1 cccgttgggc cagttgcaaa tcatgcgtca ccaacacaac cgccgtccca aaatcatcac
       61 ggatgcgggt gattaagtca aacacttgtt gcgcggtatc gcggtctaag ttgcctgtgg
      121 gttcatcggc caacacgcac aacggtcggg ccactagcgc gcgtgccaac gccacacgct
      181 gacgttcacc gccagataac tgccccggat agtggtccag acgatggtca agccccatct
      241 cggctagcag ttcacgggca cgcgcacgcg cctgtgacat cggctgcttg cccacaatca
      301 gtggcatggc gacattgtca gtggcgttaa attcgggcag caagtgatga aactgataca
      361 caaaccctaa gtgcgcattg cgcagccgag cccgtgcctt ctcagataga tcgtttgtaa
      421 gttcatccgc aatacgcaac tcgccactgt cggggcggtc tagcaaaccc agacagtgca
      481 gcagcgtgct tttaccggag cccgaagcac ccacaatggc caccatctca ccggcggtga
      541 ccgacaggtc gacgccatcg agcacttgta cgcgtcgctc gccatcttcg aagtggcggc
      601 tcacgttcgt tgcttgcaac acaatgtttg gttcagtcat gacgcaacac ctgtgccggt
      661 tcaagtcggg acgcccgcca gcttgggtac aacgtagcca gcaaagacat caccagcgaa
      721 gtcacagcaa tcaccgtgat gtcgcccgta cgagggtcag atggcaatga tgagataaag
      781 taaatttctg gcgacagaaa ttggatgccg agtgccgttt caatggcagg cacgagcgta
      841 tcgatgttgt aagccaaaag cgcaccacca ccgacaccca aagctgtgcc gacaatacca
      901 atcaatgccc cttgaattag aaagatgcgg gcaatcgccc caggcgtggc accaaggctg
      961 cgtaagatcg caatgtcaga ttgcttgtct ttgacagcca tgacctgcga tgacaagagg
     1021 ttgaaggcgg cgaccgccac aatcagcgcc aaaatcaaaa acatcatgcg cttttctgtt
     1081 tgtaccgcgg caaaccaagt ccggttgttg cgcgaccaat cggctgccag caccccgcgt
     1141 ggcaagtaac tacccaactg cgcagccacc agtggcgcgg tgtgcatgtc ggcgatgctt
     1201 aaccgaacac ccgctgtgcc cgtgtctcta aacagccgtg ccgcgtcttg cgtatcggta
     1261 aataccaatg aactgtcgta ttcatgatgg ccagatcgat acagaccggc aatggtgaac
     1321 tgacgcagcc gcggcgtaaa gcccgctggg ctgacactac cttgcggtgc gagcaacatg
     1381 acactgtcgc cagtggataa tcccaaggtg tctgccaacg tttggccgat caccaaacca
     1441 aatgatccgg gcgtgagatc gagcaaactg ccttgcacca tctggcttgc tagctcagag
     1501 acttcaggct ccatggcggg atccacaccg cgcacctgta caccacgcaa tgcttgcccg
     1561 cgcataagaa tggct
//
LOCUS       DATBNL010000336         4462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143625, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000336 DATBNL010000000
VERSION     DATBNL010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4462
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143625"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VIC30_05705"
     CDS             complement(<1..280)
                     /locus_tag="VIC30_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7803912.1"
                     /translation="MSAGSFLREALIAGIALCVLIAVPFVTDSSAAIDFGIRLAAFAV
                     FATSLNMLVGFGGMVSFGHALYFGAGAYSFGLIMQHFGMPIPLAFVLAV"
     gene            complement(277..1182)
                     /locus_tag="VIC30_05710"
     CDS             complement(277..1182)
                     /locus_tag="VIC30_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7803913.1"
                     /translation="MDSAALLDCFTSVSCIVTQTSTGLIVGALLFMVAAGLTLIFGVL
                     GIVNFAHGSLYMLGAYIALSAFRISDSFVISTIVGALGVGLFSLFFERFFMRRVYGAD
                     VLMQLLVCYAFILILDDAVKIIWGSEFQSMGMPAYFQQPPVFLGGGVIPVFYIYLIGI
                     AALMAIVLWFILSKTKVGKIVRAAAGNPSMTSALGLNTSLIYAGVFAFGGALAGLAGA
                     LAAPVRSMSPGMGFSVLIESFIVTVIGGMGSVAGALIGALLIGLIRSFGSIGFPLFIE
                     GIMFIAMAAILVLKPSGILGKETRK"
     gene            complement(1270..2544)
                     /locus_tag="VIC30_05715"
     CDS             complement(1270..2544)
                     /locus_tag="VIC30_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803914.1"
                     /translation="MKKRSQTVASQQRRQIVTGSMAAVGLASIGLPTISLAQNNPIKI
                     GMPTILSGRVAMLGEASRNAAMMGVAAFNAAGGLNGRPVELVIRDSKGRPDEAGRIAR
                     ELINSDGCDMILDAEASSGAFAVHEVARDLGFLVIHTCSETSALTADPKMRIPNGFRA
                     ARQGVHDAIVGGDYAGKVSKEQGLKTWMSISPDYSYGRDTTAEFFEYLQYFNKDVEII
                     NSVWPKLFQADYSEPITRLLQGKPQAVYSCLWGGDLTSFIDQASIYGLMQNRQFFGVN
                     MADYAVLTAIKAVPPNMHSGNRYLKSIPKTPQNAQWCDAYVAEFNTMPLNWSWENAVG
                     IDFMLKAIKQTNGTDTKKMSEALAGMTIDSPFGTEGKITMRAEDHTIVDYAIAWGDLK
                     QSEPYMPQPYMGNWQTILELEKQWMKNKGFIS"
     gene            3062..3811
                     /locus_tag="VIC30_05720"
     CDS             3062..3811
                     /locus_tag="VIC30_05720"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006048451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY7803915.1"
                     /translation="MLLNAKVAIVTGAASGFGAEIARVYAREGAKVVLVDLNEAGANA
                     VAKEIGDNAIAVKCDVSRREDIDKTVKQAISSFGTVDIVVNNAGYTHKNQPLLDVDEA
                     TFNRVFDVNVKAIYHMIMAVTPLMRERQSGCIINVGSTAGIRPRPGLTWYNASKGAAN
                     LMSKSLAVELAPDNIRVNVICPVMGETGMLGDFMGIADTPENRAKFIATIPLGRLSQP
                     SDIANVALFLAQDSSNFLTGLEFPVDGGRTV"
     gene            complement(3886..4239)
                     /locus_tag="VIC30_05725"
     CDS             complement(3886..4239)
                     /locus_tag="VIC30_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803916.1"
                     /translation="MFVMLQHVAHVRSGDKGNTSNISVFAYEPEFYPLIKSQLTAERF
                     KAHYQGVIKGDVLRYEVDNIEALNFVAHGALGGGVSRSLSLDNYGKALSAAILGFELE
                     VPQTLVPKLRGMFGS"
     gene            complement(4241..>4462)
                     /locus_tag="VIC30_05730"
     CDS             complement(4241..>4462)
                     /locus_tag="VIC30_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012840266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7803917.1"
                     /translation="PEPYELAVRVAARTATREQALKVGREVDGMAVSGVAHTGKRVPF
                     QERIREIIGVWSSLVPRDQVQASVSYWES"
BASE COUNT         1237 a         1205 c         1076 g          944 t
ORIGIN      
        1 cgactgccaa cacaaacgcc aatggaatcg gcattccaaa gtgctgcatg atcagaccga
       61 acgagtaggc gccggcaccg aaataaagcg catgtccgaa cgacaccatg ccaccgaatc
      121 ccaccagcat attcagtgag gtagcaaaca cggcaaacgc agccaatcga ataccaaaat
      181 caatagccgc agaggagtca gtaacaaatg gcactgcaat cagcacgcat aacgcgatgc
      241 cggcaattaa tgcctccctc aggaatgagc ccgcactcat ttacgcgtct ccttacccaa
      301 gattccgcta ggcttgagca ccagaatcgc agccatggcg ataaacatga tgccttcaat
      361 aaacagcggg aagccgattg aaccaaagga tcgaataaga ccaatgagca gcgcaccgat
      421 caaagcaccg gcaaccgagc ccatgccacc gatcactgtc acgatgaatg actcaatcag
      481 cactgaaaat cccatgccgg gtgacatgga gcgcaccggc gccgccaaag cccctgccaa
      541 cccagctaac gcgccaccaa aagcaaacac acctgcgtaa atcaggctgg tatttaagcc
      601 taacgccgac gtcatggacg ggttgccagc ggcggctctg acaatcttgc caactttggt
      661 tttactcaga ataaaccaca agacaattgc catcagcgcg gcaatcccaa tcaaatatat
      721 gtagaaaacc ggaatcaccc caccaccgag aaataccgga ggttgctgga aataagcggg
      781 catgcccatg gattggaact cagagcccca gatgatcttg actgcatcgt ccagaatcag
      841 aatgaaggcg taacacacca acaactgcat caagacatca gcgccgtaca cacgtctcat
      901 gaaaaatcgt tcaaaaaaca aactgaataa gccaacaccc aatgcaccga cgatcgtcga
      961 aatcacaaag ctgtcagaga tgcgaaatgc gctaagtgcg atataggcac caagcatgta
     1021 tagcgagcca tgagcaaaat tcacaatgcc aagcacaccg aatatgagcg tcaagccagc
     1081 ggcgaccata aatagcagcg caccaacaat caaaccagtg ctcgtttggg tgacgatgca
     1141 tgacactgac gtgaagcaat caagtagggc agcagagtcc aaagccgtct ccgaaggaaa
     1201 tacgggtaat tacagacccg gacgaccacg tttgatcatc cgggatagca gaacaaccaa
     1261 tgattaaatt caggagataa agcctttgtt cttcatccac tgcttctcaa gctcgagaat
     1321 tgtctgccaa ttgcccatgt agggttgtgg catgtatggt tcgctttgct tgaggtcgcc
     1381 ccaggcgatg gcgtaatcca caatggtgtg gtcttcggca cgcatggtga tcttgccttc
     1441 ggtgccaaat ggagaatcaa tcgtcatgcc tgcgagggct tcggacatct ttttggtatc
     1501 agtgccattg gtctgtttaa tcgctttgag catgaaatcg atacccacag cgttttccca
     1561 tgaccagttc agcggcatcg tgttgaactc ggcaacgtaa gcatcacacc actgcgcgtt
     1621 ttgcggggtt ttgggaatgg atttcaaata acggttgcca gaatgcatgt ttggcggcac
     1681 agccttgatg gcagtcagaa cagcatagtc cgccatgttg acaccaaaga actggcggtt
     1741 ttgcatcaga ccgtagatac tggcctgatc aataaaggat gtcagatcac caccccacaa
     1801 acaggaatag accgcttgcg gtttgccttg cagcaagcgg gtaattggct cactgtagtc
     1861 ggcctgaaac agcttgggcc aaaccgaatt gatgatctct acgtctttgt tgaaatactg
     1921 caggtactca aaaaactccg ccgtcgtatc acggccatat gagtagtcgg gcgaaatact
     1981 catccaagtc ttaaggccct gctctttgga taccttacca gcgtagtcac caccgacaat
     2041 ggcatcgtgc acgccttgac gcgctgcacg aaagccattc ggtatgcgca ttttggggtc
     2101 tgccgtgagt gctgatgttt ccgagcaggt atggatcacc agaaacccga ggtcacgtgc
     2161 tacctcatgc acagcaaatg cgcctgaaga tgcttcggcg tccaggatca tgtcacaacc
     2221 atctgaattg atcagctcac gtgcgatgcg gccagcctca tcaggtcgcc ctttagaatc
     2281 ccgaatcacg agctcgaccg gacggccatt caaaccgcca gcagcattaa aggcagccac
     2341 acccatcatg gccgcattgc gagatgcttc accaagcatg gccacccgcc ccgataggat
     2401 ggtgggcata ccgatcttga ttgggttgtt ttgcgccaac gaaattgtgg gcaagccaat
     2461 cgatgccaag ccgaccgctg ccatagagcc tgtgacaatt tggcggcgct gctgcgaggc
     2521 cactgtctgt gaacgttttt tcatgcatgt ctcctttttt gtagtattaa atcctgcata
     2581 caaacgcaac gctaatgggc gctaaaaact gtgtagctac caatacaaaa gtagatcagc
     2641 tctcaaaact caatcaaaaa acgaagacgc ctcgagcaaa gtttgaggtc gtctgagccg
     2701 attaattggc agggctgcac tgagttgtct actcttttac ttttattttt tttgactcta
     2761 gcgcacggct gagctttaag gaacaacggg aaaacccttg gctttaccga taggctagaa
     2821 accaacacgc cgcccgagcc cgacatacaa gagagaaaaa aacgggtgtc agcactaact
     2881 tccgacgcta ttaatcgaca catgatcgat atgacacacg agatgcttga gggtatagtc
     2941 agtcgagggt ttaacaaacg tcagcttagt gcggttggtg actaaatgcg tgttgacaaa
     3001 gcagtcaacc aacgccgtct gacttaccct gactgacaca aataaaacaa ggagacaagt
     3061 catgctattg aacgcaaaag ttgccatcgt cacaggtgcg gccagcggtt ttggggcaga
     3121 gattgcaagg gtttatgctc gagaaggcgc aaaagtcgtg ttagtggact taaacgaagc
     3181 aggcgccaat gccgtggcca aggaaatcgg agacaatgcg attgctgtta aatgtgatgt
     3241 cagtcgacgc gaagatatcg ataaaacggt taagcaggcc atctcatcat tcggcaccgt
     3301 cgatattgtt gtgaataatg cgggctatac ccacaaaaac cagcctctct tagatgtcga
     3361 tgaggccacc tttaatcggg tgtttgatgt caacgtcaag gcgatctacc acatgatcat
     3421 ggcggtaaca cctctgatgc gcgagcgaca atcggggtgc atcatcaatg tcggatctac
     3481 ggctggcatc cgaccaagac ctggtctgac ttggtacaac gcctcaaaag gtgctgccaa
     3541 tctgatgtca aagtcgcttg ccgtcgaatt ggcaccagat aacattcgcg tcaacgtcat
     3601 atgcccagtc atgggtgaga caggcatgct cggtgacttc atgggcattg ctgacacacc
     3661 cgagaaccga gccaaattta ttgccactat cccgctgggt cgcttgagcc aaccatcgga
     3721 tatcgcaaac gtagcgctgt ttttagcgca ggacagctcg aactttttaa ccgggctcga
     3781 gttccctgtc gatggtggca gaacggtcta aattaatgtg cggtgtcgtg ttcaccttct
     3841 cacgcattga cgcgacacca ccacgatagg accaacgcca gcccgctagg atccaaacat
     3901 gcctcgcagc ttgggaacta gcgtctgtgg cacctccaac tcgaacccaa gaatagccgc
     3961 tgacaaggct ttgccgtagt tatcgaggga caggctacga gacacaccac cgcccaaggc
     4021 accgtgggcc acaaagttta gcgcttcgat gttgtccacc tcataacgca acacatcgcc
     4081 cttgatcacc ccttgataat gcgctttgaa acgttcggcg gtcaattgcg atttgatcaa
     4141 tgggtaaaac tcaggctcat aggcaaagac cgaaatattg gacgtattgc ctttgtcacc
     4201 agaacgcacg tgggctacat gctgcaacat cacgaacatc tcaactctcc caataagaca
     4261 ctgaagcttg aacctgatcg cgtggcacga gcgacgacca cacaccaatg atttccctga
     4321 tacgctcttg aaacggcacg cgcttaccag tgtgtgccac accagatacg gccatgccgt
     4381 caacctcgcg tccgaccttt aaggcttgtt cacgcgttgc tgtgcgtgct gcaaccctga
     4441 cagcaagctc atacggctca gg
//
LOCUS       DATBNL010000337         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_143648, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000337 DATBNL010000000
VERSION     DATBNL010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143648"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VIC30_05735"
     CDS             <1..464
                     /locus_tag="VIC30_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7803918.1"
                     /translation="ATHVGFVFQSFQLLPNLTALENVMLPLELAGHDALAPAKEALAE
                     VGLDHRFNHYPSTLSGGEQQRVSLARAFISRPALLFADEPTGSLDVVTGARIIDLMFR
                     LHQEHHTTLVLVTHDPNLAKRCQRTIEIHAGRLVSETAGDAREAETDMRHS"
     gene            complement(392..1378)
                     /locus_tag="VIC30_05740"
     CDS             complement(392..1378)
                     /locus_tag="VIC30_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006219703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7803919.1"
                     /translation="MSSQSTTQRSALSSAPRPSAIGGILVLLLSLSVLSVLDASGKWM
                     LETGTALLVVVWVRYLVHFMLVLALLGARGDWQLFQSNCLRYQIMRGATILCATMSFF
                     TTLSYLPQAQATTMLFLAPLLILALAPWLLSESNRLSRWLAAGIGFVGVMIVVRPGAG
                     LDAVGVMFGLLTAALMALQHLLTRKVATDHPLTTIAWSGLVGALVLTTIVPAWLLTDD
                     TLWRATAPLLSSFNGVILLSMGITGLLGHLLQIQAYRLAAASLLAPFMYLQIVSASLM
                     GWLIWGDFPDLVSWFGIALICASGAGIAYYEWRMSVSASRASPAVSETKRPA"
     gene            1463..>1816
                     /locus_tag="VIC30_05745"
     CDS             1463..>1816
                     /locus_tag="VIC30_05745"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY7803920.1"
                     /translation="MSFDKHHTLERLAHALKTGQTTSQALVEQALGRIEDDEGQGPVA
                     FIRVFADTAREQALASDARRAAGSPKSEIDGLPISVKDLFDIEGCTTRAGSVVLSDCE
                     PAKEDAVVVQRLRAAG"
BASE COUNT          451 a          500 c          499 g          366 t
ORIGIN      
        1 gcgccaccca cgtggggttc gtgtttcagt cgtttcagct gttgcccaac ctaaccgccc
       61 tagaaaacgt gatgttgcca ctcgagctcg ctggccacga tgcattggca ccggccaaag
      121 aggcgttggc tgaagtggga cttgatcacc gttttaacca ctatccatcg acactgtctg
      181 gtggtgagca gcaacgtgta tcgttggcac gtgccttcat tagccgacca gcgcttttgt
      241 ttgccgatga gcccacgggc agcctcgatg tggtgacagg tgcacgcatc attgatttga
      301 tgtttcgtct gcatcaagag catcacacaa cattggtgtt ggtcacacac gaccccaacc
      361 tagctaaacg ttgtcaacgc accattgaga ttcatgcagg acgcttggtc tctgagaccg
      421 caggtgatgc gcgcgaggct gaaaccgaca tgcgccactc gtagtaggcg atgcctgcgc
      481 cactggcgca gatcaacgcg ataccgaacc agcttaccaa gtcgggaaag tcaccccaaa
      541 tcagccagcc cattagactg gcggacacga tttgtaggta cataaagggt gcgagcagcg
      601 aagcggcagc tagccgatag gcctgtatct gtaagagatg gccgagcaaa cccgttattc
      661 ccattgacaa caagataacc ccgttaaatg atgacagaag cggggctgtg gcgcgccaca
      721 aggtgtcatc ggtcagcaac caggctggca cgatcgtggt cagtactaac gcaccgacaa
      781 gcccgctcca tgcgatggtg gttaaaggat ggtcagttgc taccttacgc gtaagtaggt
      841 gctgcaacgc cattaaggcc gccgtgagca agccaaacat cacgcccacg gcatctaagc
      901 cagcgcctgg acgaaccaca atcatcacac ccacgaaccc aatgccggcg gcaagccagc
      961 gtgaaaggcg gttggattca ctgagcaacc aaggcgcgag cgccagaatc aatagtggcg
     1021 ccagaaacaa catggtggtc gcttgcgcct gaggcaagta ggacaatgtc gtaaaaaagc
     1081 tcatggtggc gcacagaatg gtggcaccac gcatgatctg gtagcgcaga caattgcttt
     1141 gaaacagttg ccagtcgccg cgtgcaccga gcaatgctag taccagcatg aaatgcacaa
     1201 ggtatcggac ccacacgacc accagcaaag ccgtaccggt ctcaagcatc cacttgccgc
     1261 tggcatcgag cacggacagc accgataacg acaataaaag caccaaaatg ccaccaatgg
     1321 cacttggcct aggtgctgaa gacagtgctg atctctgtgt tgtggattgc gaagacacgg
     1381 tttggggatc tttgtaaaca gcgatagcga gtcctcatga tacgcttgtg cccttgaaac
     1441 atgttgttgt tcaaggattt ttatgtcgtt tgataaacac cacacactgg agcgcctggc
     1501 tcacgcgctc aagacgggtc aaactacttc gcaagcgctt gttgaacaag cgcttggacg
     1561 cattgaagat gatgagggac aaggccccgt ggcgttcatc cgggtgtttg ccgataccgc
     1621 tcgtgaacaa gcacttgcat cggatgcccg tcgtgccgct ggctcgccta agtccgaaat
     1681 agatggctta cccatctcgg tcaaagacct gttcgatatt gagggttgca ccacgcgcgc
     1741 tggatcggtg gtgctatctg actgcgaacc agccaaagaa gatgccgtgg tggttcaacg
     1801 tctgcgcgct gcaggc
//
LOCUS       DATBNL010000338         2257 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_133737, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000338 DATBNL010000000
VERSION     DATBNL010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133737"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..593
                     /locus_tag="VIC30_05750"
     CDS             3..593
                     /locus_tag="VIC30_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006463612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqiA/YcfP family alpha/beta fold hydrolase"
                     /protein_id="HEY7803921.1"
                     /translation="MLYLHGFRSSPSSFKAQMLADAFATRGLGDRWRCPQLPASPKAA
                     LALAHAQVGELLATTGQSAKELTVAGSSLGGFYAIALAQVLGCRAVLMNPAVAAPRDL
                     ATQIGEHKLYHSDEPMTFKPEYVDELAAMSVPAITEPDRYLLIAATGDEVLDWREMVA
                     FLPDAHHIIVPGSDHGLSNFETYMPRVLAFAGVLTP"
     gene            606..>2257
                     /locus_tag="VIC30_05755"
     CDS             606..>2257
                     /locus_tag="VIC30_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease catalytic domain-containing
                     protein"
                     /protein_id="HEY7803922.1"
                     /translation="MFVLYEDGGQFKTGLIKSETDASLQIEAASGKRSKIKRAHCILT
                     FESPGQEQLLQQAAELAKEMDPAFLWEVAPEAEFDVNELAADYYGHTPSSLETVTLLF
                     ALHDAPVHFHRRGKGKYRAAPPDILQAALAAQEKKRLQAEQQAKWAEQLAAGELPDDV
                     AQNALSLVTRPDKNSLAYKALDQACQQTGLTPEALLLKCGAWPHALALHRSKFLSMNF
                     PKGTGFGQCPPLPAHDDLPMADVTAYSVDDISTTEIDDALSVRELPDGWLEVGVHVAV
                     PALGVTRGSELDEWARGRMSTVYTPGEKIPMQPDAVINHYSLVAGQAVPALSLYAQVD
                     PTTADIRHHETRVERLMVTGNLRHNELDAVITTEALEDPDTSFAYDHWARPLWTLTQA
                     LSAQRDERRGKPENNQRVDYSFYLDGPPDDRDTPVRIEPRMRQAPLDRIVAEFMILAN
                     RLWAQQLDQHNLPGVFRSQQTGRVRMSTHALPHEAIGVDHYAWCTSPLRRYVDLVNQR
                     QLLALAEHGVSAALVAPYKPRDDDLFAVIGGFESQYTTWADY"
BASE COUNT          499 a          676 c          599 g          483 t
ORIGIN      
        1 tgatgttgta cctgcacggt tttcgatcat ctccgtcatc gtttaaagcg cagatgctcg
       61 ccgatgcatt cgcaacgcgc ggcttgggtg accggtggcg ctgcccgcaa ctacccgcca
      121 gtcccaaagc agcgctagca cttgcacatg cgcaggtcgg tgaactgctt gcaaccacgg
      181 gccagtctgc caaagagttg actgttgccg gatcttcact gggcggcttt tacgccattg
      241 cactggccca agtgcttggc tgccgggccg tgctgatgaa ccctgcggtg gccgctcctc
      301 gcgaccttgc gacccagatt ggtgagcata agctttatca cagcgatgaa cccatgacgt
      361 ttaaaccaga atacgtcgac gagttggccg ccatgtccgt gccggccatt accgaacccg
      421 accgctatct cttgattgca gccactggcg acgaggtgct tgactggcgt gagatggtcg
      481 cgtttttgcc cgacgctcac cacattatcg tgcccggcag tgatcatggg ctctcgaatt
      541 ttgaaaccta tatgccccgc gtgcttgcat tcgccggcgt gctaacccct taacaggtag
      601 attgaatgtt tgtgttgtac gaagatggcg gtcaattcaa gaccggcctg attaagtcag
      661 aaaccgatgc cagcctacaa attgaggccg catcgggcaa gcgcagcaaa atcaaacgcg
      721 cgcattgcat cctgacgttt gaatcgcccg ggcaggagca gttactgcaa caagccgcag
      781 agctcgccaa ggagatggat ccggcttttc tctgggaagt tgccccagaa gctgagtttg
      841 acgtcaatga actggccgca gattattacg gacatacgcc ttcgtcgctc gagactgtca
      901 cactgctgtt tgcgctgcat gacgcaccag ttcattttca tcggcgcggc aaaggaaaat
      961 accgcgccgc gccgcccgat atcctgcaag cagcgctggc cgcacaagaa aaaaaacgtc
     1021 ttcaagccga acaacaggcc aagtgggctg agcaacttgc cgctggcgaa ttacctgatg
     1081 acgtcgcaca aaatgcccta tcgcttgtca cacgccccga caaaaactcg ctggcctaca
     1141 aagcacttga ccaagcctgc cagcaaactg gacttacgcc tgaggcactg ttactaaaat
     1201 gcggtgcctg gccacatgca ctggccctgc ataggtctaa gtttttaagc atgaactttc
     1261 ccaagggcac cggttttggc caatgtccgc cactacccgc tcatgacgat ctgcccatgg
     1321 ccgacgtcac ggcctactcg gtcgacgata tttcaacgac cgaaatcgat gacgcgctgt
     1381 ctgtcagaga gctacctgac ggctggctcg aagttggtgt tcacgttgct gttccagcac
     1441 tgggtgtcac acgtggcagc gaactcgacg agtgggcgcg cggccgtatg tcaacggtct
     1501 acaccccggg ggaaaaaatc cccatgcagc ctgatgcagt tatcaaccat tactctttgg
     1561 ttgctggtca agcggtaccg gcgctctccc tatatgctca ggttgatccg accacagctg
     1621 acattcgcca ccacgagacg cgcgttgagc gtctgatggt caccggcaac ctgcggcaca
     1681 atgagctcga cgccgtgatc accacagagg ccctcgaaga tcccgataca tcgtttgcct
     1741 acgaccattg ggcacgtccg ctgtggacgc tgacccaagc ccttagcgct cagcgtgacg
     1801 agcgacgcgg taaacccgag aacaatcagc gtgtggacta cagcttttac ctagatggcc
     1861 cacccgatga tcgcgacacg ccggttcgaa tcgaaccccg tatgcgccag gcaccgcttg
     1921 accgtatcgt tgctgaattt atgatacttg ccaatcgact ttgggcccaa caactggacc
     1981 agcacaatct gccaggcgta tttcgttcgc aacaaaccgg tcgtgtgcgc atgagcacac
     2041 acgctctacc gcatgaagcc attggggtcg atcattatgc ttggtgcaca tcaccgctgc
     2101 gtcgctatgt tgacctggtt aatcagcgcc agttactggc gctggccgag cacggcgtgt
     2161 cagcggcgtt agtcgcgcct tacaaaccac gcgatgatga cttgtttgcg gtgatcggtg
     2221 gatttgaaag ccaatacacc acctgggcag actacca
//
LOCUS       DATBNL010000339         5882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_123673, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000339 DATBNL010000000
VERSION     DATBNL010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5882
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123673"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..614)
                     /gene="soxX"
                     /locus_tag="VIC30_05760"
     CDS             complement(<1..614)
                     /gene="soxX"
                     /locus_tag="VIC30_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012357972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxX"
                     /protein_id="HEY7803923.1"
                     /translation="MKMTSKVVATSAGAVLSALAINVSAQDPDPAVIAILESSFESKG
                     IAEKSRIYPDSIQALCSDPTYANTPEGQKRAIELQTAALKEITPPSDGKYLGDWEQGY
                     KIAQSGRGHTWRDSADRVNGGMCFNCHQITKEEISYGTIGPSLLGYGKLRGYSPEIIE
                     YTWNRINNSKAYNACSNMPRFGHFELITEQQIKDVMALLLDPESP"
     gene            complement(634..1440)
                     /gene="soxA"
                     /locus_tag="VIC30_05765"
     CDS             complement(634..1440)
                     /gene="soxA"
                     /locus_tag="VIC30_05765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007871156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016669 - oxidoreductase activity, acting
                     on a sulfur group of donors, cytochrome as acceptor
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019417 - sulfur oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxA"
                     /protein_id="HEY7803924.1"
                     /translation="MKIGAYKFAAAALVSAVVAAPVAAQTASEQLQQYRDMLAEGNPA
                     ELYEMDGEELWYTAAGPKNATLETCDLGLGPGVVEGASAQLPRYFADTDRVQDLESRL
                     LTCMQEIQGIDPEPIINGSFGKGARIPMEAIVAYVSGMSKGMTVDVSVDHPKEKEMLA
                     MGEKLFYMQGGPMDFSCASCHAAKGQRIRMQDLPDLTEHAGAAAGWGNWPAYRVNRGV
                     FWTMQRRLNDCYRQQRMPYPIYASDVTIALSMYMANMANGGEINTPSIKR"
     gene            complement(1474..1788)
                     /gene="soxZ"
                     /locus_tag="VIC30_05770"
     CDS             complement(1474..1788)
                     /gene="soxZ"
                     /locus_tag="VIC30_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003053938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HEY7803925.1"
                     /translation="MAGKMRTRAQLGDNGVTTVKVLMKHPMETGLRKGSDGNKIPAHY
                     IEIVEAKLGDQSLFTAMLGPAVSKDPYLAFETSVPKKGDKIEISWKDNQGQTQSTDAS
                     VR"
     gene            complement(1856..2311)
                     /gene="soxY"
                     /locus_tag="VIC30_05775"
     CDS             complement(1856..2311)
                     /gene="soxY"
                     /locus_tag="VIC30_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018006136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HEY7803926.1"
                     /translation="MNQQRRTLMQFTALVGLMASAGLMTQAEAATWNKAAFEAKSIAD
                     VEKVLGAGSVQESDQVSLRAPDIAENGAVVPVGVQSDLEGVTQIAILVKENPSALAAM
                     FMLPAGAKPDVTTRVKMGQTSDVVGLVKVGDKWMMATKEIKVTLGGCGG"
     gene            complement(2372..3448)
                     /locus_tag="VIC30_05780"
     CDS             complement(2372..3448)
                     /locus_tag="VIC30_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012078312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7803927.1"
                     /translation="MFKLVKLASSIALAGVASFAVAQEPVSFEGIGRAATPNEVAAWD
                     IDVRPDFVGLPAGSGSVDDGMEIWDAQCLSCHGVFGESNEVFTPLIGGTTLEDQETGR
                     VASLTDPNQPQRTTLMKVPTVSTLWDYIHRAMPWTSPRSLSVDDTYAVLAYMLYLGEI
                     VDDDFVLSNTNIAEIQEVMPNRNGMTTEHGMWQRDAKPDVNGSTCMTNCVEAVEVTST
                     LPDFARNAHYNLAEQNRTFGPFRGVDTTKPPLAELPGDNYEQVAVVQAQGNSGGGDSI
                     DVAQLFKANNCAACHAADMTMVGPSIQAISDKYDADAETLAMLASKVKGGGVGTWGQI
                     PMPPHPQVSDQDIDVMVKWMVVGP"
     gene            complement(3432..4793)
                     /gene="soxC"
                     /locus_tag="VIC30_05785"
     CDS             complement(3432..4793)
                     /gene="soxC"
                     /locus_tag="VIC30_05785"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HEY7803928.1"
                     /translation="MSKTKLSEIPGQVRQAPEGFLPAEFTADLSAHGMSEERRGFLRK
                     SFLGAVGAVGAGVGASAFAAGADDPAIVEKQTWQTILGKPVAAAPYGSPSMYEQNLQR
                     RQSPGLTAVDAASVSFAPLQGFFGIVTPNGLHFERHHQGWVDIDPAMHRLMINGLVKK
                     EMVLTMDDLMRLPRTSKFHFIECGANTGMEWGNVAVPTVQYTHGMLSCCEFTGVPLKV
                     LLEMAGADLTKGKYVLAEGSDGSGMTRTIPMDMALDDVMVAFGMNGEMLRPENGYPLR
                     LVVPGVQGVSWVKWLRRIEVGDKPYATKDEAIHYIDLMPDGLHRQYTTIQEVKSVITT
                     PSGGQQLLNTGFYNVTGLAWSGRGKIARVDVSVDGGKNWREARLETPVMDKCLTRFNI
                     DWVWDGSPAILQSRAVDDTGHVQPAIRQLREVRGTRSIYHNNAIQSWKVGANGEVSNV
                     QVG"
     gene            4981..>5882
                     /locus_tag="VIC30_05790"
     CDS             4981..>5882
                     /locus_tag="VIC30_05790"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018903133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY7803929.1"
                     /translation="MSQQNHNKDNSRINTDLLLDGQALGGRSETSRRAFLRNTTAAGL
                     VGGFALAAQPIQAQQVINTNFEGLDADEAYVEENGLELYAYYAKPKDASGPLPTVIVC
                     SEIFGVHEHIADIVRRFAKQGYLAIAPEFFTRAGDPMMLGTVAEVLKEIIAKTPDAQV
                     MDDIRACLAWAAKNGGDPERVGVTGFCWGGRITWLACANITHMKAGVAWYGRLVGEKS
                     DNFPAHPVDLAKDLKAPVLGLYGGKDDGIPLSTVDQMKQALTDATNNPAAQASRFEIY
                     PEAPHAFHADYRASYREAAAKDGW"
BASE COUNT         1382 a         1687 c         1440 g         1373 t
ORIGIN      
        1 ggagattcag gatcgagcaa taaagccatt acatccttga tctgctgctc agtaatgagc
       61 tcaaagtgcc caaaacgtgg catgttgcta caagcgttat acgctttgga attattgata
      121 cgattccagg tgtattcaat aatctctggg ctataaccac gcaacttgcc ataacctaac
      181 aacgaagggc caatcgtgcc gtaagaaatt tcttctttgg taatttgatg gcagttaaaa
      241 cacataccac cgttgactcg atcagcactg tcgcgccaag tgtgacctct gccgctttgt
      301 gcaatcttgt agccctgttc ccaatcacct agatacttcc catctgatgg aggggtgatc
      361 tctttgagtg cagccgtctg gagctcaatg gcgcgtttct gcccttcagg cgtatttgca
      421 tacgttgggt ctgaacacag cgcctggatg ctgtccggat agatccggct tttctcggca
      481 atgcctttgg actcgaaact gctctccaaa atcgcaataa cagctggatc gggatcttgc
      541 gcactgacat tgattgccag cgctgacaga accgcacctg cacttgtagc aaccactttg
      601 ctagtcattt tcattttcta tcctccgtgg agcttatcgc ttgatgctag gcgtgttgat
      661 ctcaccgcca ttagccatat tggccatgta catggacaag gcaatggtca cgtctgaggc
      721 ataaatcgga tatggcatgc gctgttggcg ataacaatcg ttcaagcgac gctgcatggt
      781 ccagaacacg cctcggttga cacggtaggc aggccagtta ccccaaccag cagcagcacc
      841 cgcatgctcg gttaagtcag gcagatcctg catacgaatg cgctgaccct ttgccgcgtg
      901 acaggaggca caggagaagt ccatcggtcc accttgcatg taaaagagct tttcgcccat
      961 ggcgagcatc tctttttcct tggggtggtc tacggaaaca tccacggtca tacctttgga
     1021 catacccgag acgtaggcca cgatggcttc catgggaatg cgggcaccct taccgaagga
     1081 tccattaatg atgggctcgg ggtcaatacc ctgaatctct tgcatgcaag tcaacaaacg
     1141 tgactcaagg tcctgtacac gatctgtgtc cgcaaagtag cgtggtagtt gggccgatgc
     1201 accttctaca acgcctggac ccagccccag atcacaggtc tcaagtgttg cattcttagg
     1261 acctgccgcg gtgtaccaaa gctcttcacc gtccatctcg tagagttcag ctggattgcc
     1321 ttcggcgagc atgtcacgat actgttgcaa ctgctcagaa gcagtttgag ctgccactgg
     1381 cgcagcaaca acagccgaga cgagtgcggc cgcagcgaat ttatacgctc cgattttcat
     1441 atgtctcctc ctgcctgtat ttgcttatta ttgttaacgc acggaggcgt cagtggactg
     1501 ggtttggccc tgattgtcct tccagctgat ttcgattttg tcgcctttct ttggcacgct
     1561 tgtctcgaaa gcaagatagg gatccttaga caccgccggt cctaacatcg cagtaaacaa
     1621 ggactgatca cccagtttgg cttcaacaat ctcgatgtag tgtgcaggaa tcttgttacc
     1681 gtcactgcct ttacgcaatc ccgtctccat gggatgcttc atcagcactt tgaccgtggt
     1741 aaccccgtta tcgcccagtt gggctctagt acgcattttt ccagccattt tttcctctct
     1801 ttatccagta tttgacaaag acgtagcaac taattgcccg tacagtcttt cagtcttagc
     1861 cgccgcaacc accaagagta actttgattt ccttggttgc catcatccac ttgtcaccga
     1921 ctttgaccaa accaaccaca tcagatgttt ggcccatctt gacacgcgtg gttacatcag
     1981 gcttggcacc ggctggcaac ataaacatgg ccgccaacgc gctggggttc tctttcacca
     2041 aaatagcgat ttgcgtcacg ccctcgaggt ctgactgaac acccacgggc accacagcac
     2101 cgttttctgc gatatcaggt gcacgcaagc tcacttggtc cgactcttgt acggatcctg
     2161 cgccgagcac tttctcgaca tccgcaatcg acttggcctc aaacgcggcc ttgttccacg
     2221 ttgcggcttc agcctgtgtc attaaacctg cgctggccat caagccgacg agcgcagtaa
     2281 attgcatcag tgtgcgtcgc tgttgattca ttgattgact cctctcccgt gtggtactgc
     2341 aaaaaattaa acttactggt ttttaaaaaa attaggggcc tactaccatc catttgacca
     2401 tcacatcgat gtcttggtcg gagacttgag gatgcggtgg catgggaatc tgcccccaag
     2461 ttccgacacc cccacccttg actttcgaag ctagcatggc aagtgtctca gcgtccgcat
     2521 catacttatc cgagatggcc tgaatcgatg gacccaccat ggtcatatcg gctgcatggc
     2581 aagccgcgca attatttgct ttaaataatt gagccacgtc aatgctgtct ccgccaccgg
     2641 aattaccctg agcctgcacc acagcgacct gttcataatt gtcacctggc agctcagcca
     2701 atggtggctt tgtcgtgtct acaccgcgaa acggaccaaa cgtgcggttt tgctctgcaa
     2761 gattgtagtg agcattgcgc gcgaagtcag gcaacgtcga tgtgacttca acagcctcaa
     2821 cacaattggt catgcaggtg ctgccattaa catcgggttt cgcgtcgcgc tgccacatgc
     2881 catgctccgt cgtcatacca ttgcggttgg gcatgacttc ctggatctca gcgatattgg
     2941 tattggacaa cacaaaatcg tcgtcaacaa tttcgcctag gtaaagcata tatgccaata
     3001 cagcataggt atcgtccacg gacagcgacc gcgggctggt ccaaggcatg gcgcgatgaa
     3061 tgtaatccca gagcgtcgaa acagtcggga ccttcatcag cgtggtgcgt tgtggctggt
     3121 tgggatccgt cagagaggca actcgacctg tctcctgatc ctcaagggtg gttccgccta
     3181 tcagcggcgt gaacacctcg tttgattcgc cgaacacgcc atggcaactc aaacactggg
     3241 catcccatat ttccatgcca tcgtcaaccg aacccgatcc cgccggtaaa ccaacaaaat
     3301 ccgggcgtac gtcaatatcc caagccgcca cttcattggg cgtggccgcg cgaccaatgc
     3361 cctcgaagga caccggctct tgtgccacgg cgaagctggc aacaccagcc aatgcgattg
     3421 agctcgctag cttaaccaac ttgaacattg ctgacctccc cgtttgcacc caccttccag
     3481 gactggatgg cattgttgtg atagatcgac cgagtaccgc gcacctcacg caactgacga
     3541 atcgctggct gcacgtgacc tgtgtcatca acggcgcgtg actgcaggat ggcaggacta
     3601 ccgtcccaaa cccaatcgat gttaaagcgg gtcaagcact tgtccatcac tggtgtttca
     3661 agccgagcct cgcgccagtt cttaccaccg tcaacagaga catcaacgcg agctattttg
     3721 ccgcggcccg accatgccag accggtgacg ttgtagaaac cggtgtttaa caactgctga
     3781 ccaccagacg gtgtggtgat gaccgacttg acttcctgga tcgtggtgta ttgacgatgc
     3841 agaccatcag gcatcagatc gatgtagtga atagcctcgt ctttggtagc atatggctta
     3901 tcgccaactt caatgcggcg caaccacttg acccaactaa cgccctgaac gccgggcacc
     3961 actaagcgca atgggtagcc gttttctggg cgcagcattt cgccgttcat accaaaagcc
     4021 accatgacat catcaagcgc catgtccata gggatagtgc gcgtcatgcc cgaaccatca
     4081 ctgccttcgg ccaaaacata tttgcctttg gtgagatccg cgccagccat ctccaacagc
     4141 accttgagcg gcacgccggt gaactcacaa caggacaaca tgccgtgggt gtactgcacc
     4201 gtaggcacag caacgttgcc ccactccata ccggtgttgg caccacattc gatgaagtga
     4261 aactttgaag tgcgtggcaa acgcatcaag tcatccatgg tcaagaccat ttctttcttg
     4321 accaagccgt tgatcatcag gcggtgcatg gcaggatcaa tgtcgaccca accctgatgg
     4381 tgacgctcaa agtgcaaacc gttgggcgtt acgatcccaa aaaatccttg cagcggcgcg
     4441 aatgacaccg aggctgcatc aaccgcagtc agtccggggg actgacgtcg ttgcagattt
     4501 tgctcgtaca tcgaaggcga gccgtatggc gctgccgcca ctggcttacc caatatggtt
     4561 tgccaggttt gtttctcgac aatcgctgga tcgtctgcgc cggcagcaaa agcactagcg
     4621 cctaccccgg cgcctaccgc gccaactgca ccgaggaagc ttttacgcaa gaagccgcgc
     4681 cgttcctcgc tcattccatg ggctgacaga tcagccgtaa actcagcggg taaaaaaccc
     4741 tcgggtgcct gacgcacctg cccggggatc tcagaaagct tagtcttgct caagattttc
     4801 tccaaggaaa cactgcgctg cagcttagtt acctttgtag ttatttgctc atgcgataca
     4861 gtaataaata tttcatttga gccatattaa ggaaaaccct agtatgcgac cagccctcac
     4921 tggggcaagg tgtgggatgt cgaataaatc ttggtactaa aaagcattgg aggagagcaa
     4981 atgtctcaac aaaaccacaa caaagacaac tcgcggatca acaccgacct tttgcttgat
     5041 ggccaagcgc tcggtggccg ctctgagacg tcgcgccggg catttttacg caataccact
     5101 gcggccggtc tagtcggggg atttgcactc gcagcccagc ccattcaagc gcagcaagtc
     5161 atcaacacca atttcgaagg cttggatgcc gatgaggcct acgttgaaga aaacggactc
     5221 gaactctacg cctattacgc gaagcccaaa gacgcaagcg gccccctgcc cacggtcatc
     5281 gtctgtagcg agatctttgg tgtacacgaa cacattgcgg acatcgtgcg acgtttcgct
     5341 aaacaaggtt atctggccat tgcacctgag ttttttaccc gtgccggcga cccgatgatg
     5401 ttgggcaccg tggccgaagt gctcaaagaa atcatcgcca aaacccctga cgctcaagtc
     5461 atggacgaca tccgcgcttg cctcgcctgg gcagctaaaa acggcggtga ccctgaacgc
     5521 gtgggcgtca ccggcttctg ttggggtgga cgaatcactt ggctggcatg cgccaatatc
     5581 acacacatga aagccggcgt ggcctggtac gggcgcttgg tgggtgagaa aagtgacaac
     5641 ttcccagccc accctgttga cttagccaaa gatctcaaag ccccagtatt gggtctttac
     5701 ggcggcaaag atgacggcat tcccctgtca accgttgatc aaatgaagca agccttgacc
     5761 gacgccacaa acaaccccgc cgcgcaagcg tctcgctttg aaatctaccc tgaggcacca
     5821 catgcctttc atgctgacta tcgcgcaagc tatcgcgaag cggcagccaa agacggttgg
     5881 ca
//
LOCUS       DATBNL010000340         1904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73859, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000340 DATBNL010000000
VERSION     DATBNL010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73859"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VIC30_05795"
     CDS             complement(<1..518)
                     /locus_tag="VIC30_05795"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7803930.1"
                     /translation="MAELLRFGDLQDKVVWITGAAKGMGLAMAHAFAQQGARLALMDI
                     DEQGLQQARESLALSSDRCLVLTASVTQPEQMDKAVEQVVSFFGCLDVLINNAGVSMN
                     QPSLEVSAQDWVNTININLNGVFFCAQAAGRQMIEQGSGVIVCMGSIYSVITAPDRAA
                     YCASKAAVVAVS"
     gene            complement(511..>1904)
                     /locus_tag="VIC30_05800"
     CDS             complement(511..>1904)
                     /locus_tag="VIC30_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7803931.1"
                     /translation="DNVLGRQIAIPRGRGLGGSSLINGMIYVHGQPSDYDQWSALGAT
                     GWSAQTVLPYFSKLETYAFAQGKRGRSGPMHIDQVRERFPISSALMQAAREAGYTENP
                     DYNGSEQEGFGYYQVAQKDGQRWSVYDGYLKPALARPNLAVQTDAMVIRLEFEGKQCT
                     GVTYKQGGQLKTVKAAKEVILAAGAVQSPQLLEVSGVGDPDRLSRLGIKVVHASPEVG
                     ENYQDHFATRMNWRVHGVKTLNETTRGLALVRSVLQYALTRRGLLTLGTGLVHGFVRS
                     SPSAVSPDIQYFFMHASYANAAVRALDKKPGMTLGVTGLQPTSRGSIHAQSADMLAQP
                     AICPNFLATTEDQVCLINGMKIARDLMKQPAIAKYIVSEMNPGQAIQSDADWLHFARE
                     NGQTIYHPIGTCRMGSDDQAVVDPRLRVKGIHGLRVVDASVFPSMVSGNTQGAVMAVA
                     ERACDLILEDERG"
BASE COUNT          460 a          563 c          445 g          436 t
ORIGIN      
        1 tttgaaacgg ctactacggc cgctttggac gcacaatagg ctgccctgtc cggtgccgta
       61 atgacactgt aaatagaccc catacaaaca atgacgccag atccctgctc aatcatttgc
      121 cgacccgccg cctgcgcaca aaagaaaaca ccattgaggt tgatattgat ggtgttaacc
      181 caatcctgag cactgacctc cagactcggc tgattcatgc tgacgcctgc attgttaatt
      241 aaaacgtcga ggcacccaaa aaaactcacc acttgttcca ccgctttgtc catctgctcc
      301 ggctgcgtca ctgacgcagt cagaaccaga catcggtctg aacttagcgc cagcgactcc
      361 cgggcttgct gcaacccctg ctcatctata tccattaaag ccagtcgggc accttgctgc
      421 gcaaacgcgt gggccattgc caaacccatc cctttcgctg cccccgtaat ccagacaacc
      481 ttgtcttgca aatccccaaa acgcaacagc tcagccacgc tcatcctcca agatcaggtc
      541 acaagcccgt tcagcaactg ccatgactgc gccttgtgta ttaccggata ccattgatgg
      601 aaatacggat gcatctacca ctcgcaaacc gtgaatgcct ttgaccctaa gacgtggatc
      661 gacgacggct tggtcatcac tacccatgcg acacgtgcca atcgggtgat aaatggtttg
      721 accattctcg cgggcaaaat gcagccagtc ggcatcgctt tgtattgctt gcccggggtt
      781 catttcgcta acaatgtatt tggcaatcgc aggctgcttc atcaaatcac gcgcgatctt
      841 catgccattg atcaaacaca cttgatcctc tgttgtcgcc aagaaattgg gacagatagc
      901 aggttgtgcc aacatgtctg ctgattgcgc atggatgctg ccacgcgagg tcggttgcaa
      961 gccagtcaca ccgagcgtca tacccggttt tttatccagc gcgcgcacgg ccgcgttggc
     1021 atagctcgca tgcataaaaa aatattgaat atcaggactg acagcgcttg gtgaggatcg
     1081 gacaaaaccg tgcacgagac ccgttcctag tgtgagtagc ccacggcgag tcagtgcata
     1141 ttgcagcaca gaacgcacca gcgctaatcc tcgcgtggtt tcgttcagcg ttttgacccc
     1201 gtgaacccgc cagttcatgc gcgtggcaaa gtgatcctgg tagttttccc cgacctcggg
     1261 acttgcatgc acgaccttaa tacccagacg cgacaaacga tcaggatccc ccacaccgga
     1321 gacttcgagc aattgcggtg actgaaccgc accggcggcc aagataactt ctttggctgc
     1381 cttgaccgtt ttgagttggc caccttgctt ataagtcaca ccggtacact gcttaccttc
     1441 aaactcgagc cgtatgacca tggcatcggt ttgaacagcc aaattgggac gggctaacgc
     1501 gggcttgaga tatccatcgt aaacactcca acgttggccg tctttttgtg ccacttgata
     1561 gtaaccaaag ccctcttgtt cactcccgtt gtagtcagga ttttctgtat aaccagcttc
     1621 gcgcgcggct tgcatcagcg ccgaggagat cggaaaacgc tcacgaacct gatcaatgtg
     1681 cattggcccc gacctaccac gcttgccttg cgcgaaggcg taggtttcaa gtttggagaa
     1741 ataaggcaag actgtttgag cagaccaccc agtggcacct agcgcagacc attggtcata
     1801 gtcactgggt tggccatgga cataaatcat gccgttgatg agactcgacc ccccaagccc
     1861 tcggccccgt ggaattgcaa tctgacgacc taaaacatta tctt
//
LOCUS       DATBNL010000341         7882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_153631, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000341 DATBNL010000000
VERSION     DATBNL010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7882
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153631"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VIC30_05805"
     CDS             <1..495
                     /locus_tag="VIC30_05805"
                     /inference="COORDINATES: protein motif:HMM:NF023302.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3394 domain-containing protein"
                     /protein_id="HEY7803932.1"
                     /translation="RLWESAALLLVAFTLFVPRFWLDQVQDPFETKPPVTLAQVADDL
                     EVGDRVRFVVRGPSFTTGDPVDLTLSHVVTEQDPGSNRLQEQGMMFLPEGERLFLDEP
                     MFNTPYQEKLSGFDFYLDDRVEVVSVLSPAQRLPKQVFYIPAIGLLLLIIVLQRRRQT
                     KPAF"
     gene            514..939
                     /locus_tag="VIC30_05810"
     CDS             514..939
                     /locus_tag="VIC30_05810"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7803933.1"
                     /translation="MYKNILLPVDLSDEMSSSKALAAALDLTTADTTLHVVSVLPSFG
                     SAQVAGYFSADFEKQALKHLGDELCAWVQAKVPNDIKVKPHVLHGTIYHEVLTAADKL
                     AADLIVIGAHRPELKDYFLGPNAARIVRHAKPSVFVVRN"
     gene            944..2278
                     /locus_tag="VIC30_05815"
     CDS             944..2278
                     /locus_tag="VIC30_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY7803934.1"
                     /translation="MMAHHIFGRTAKSTMPVAVQGDGCYIIDDHGKRYFDGSGGAAVS
                     CLGHSNEAVRSAVRDQIDQLEFAHTGFFTTPVAETLADRLIAHAPEGIDRVYLVSGGS
                     EAVEAAIKLARQYFLEIGEPDRHHVIARRQSYHGNTLGALAAGGNEWRRAQFAPLLVP
                     TTHISPCYAYRGQQDDETLEQYGLRVANELETEIKRLGPETVMAFIAEPVVGATSGAV
                     PSVPGYFKRVREICDQYGVLLILDEVMCGMGRTGHLFACEHDGITADMITIAKGLGAG
                     YQPIGALLTSQKIYDAIAQGSGFFQHGHTYLGHPVAAAAANAVLDVLTSDGMMDHVTS
                     QGNKLQAALEASLGDHPNVGDIRGRGLFRGVELVENRDTKAVFDPARKLHAKIKAQAF
                     ERGLICYPMGGTIDGRRGDHVLLAPPFIIDDAQIEEVVTKLTQSIEAALQQG"
     gene            2317..2718
                     /locus_tag="VIC30_05820"
     CDS             2317..2718
                     /locus_tag="VIC30_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803935.1"
                     /translation="MYHYTDGGLRNVWLANGYEIKQTPYGEGVVFHNLDGLTRCICLA
                     LTRKPSKLTGAEFRYIRSAGMLLSQPALGKLIGIDGQSVARWEKTARFHAGLISYCAC
                     YTPPMPKGMNPLPMRLNGSRPLSAWSNKKSL"
     gene            2955..4514
                     /locus_tag="VIC30_05825"
     CDS             2955..4514
                     /locus_tag="VIC30_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803936.1"
                     /translation="MPTAQRRKLPIGIQTFSEIREGQYYYVDKTAHIDKLVNQNKYYF
                     LSRPRRFGKSLLLDTLDCLFSGRQSLFTGLYIEDRWQWDTRHPVIRLSFGSGVMSSRE
                     TLDQYIHELLNAETKRLGLTLTNASIAGRFKELIQLAHQHFGEPVVVLIDEYDKPILD
                     NICDSDRALELREGLINLYSVIKDADPHLKFVMLTGVTKFSKVSLFSGLNNLRDITLS
                     PDFADICGYTDVDIDSVFDAELGDFDRQQIKDWYNGYRWGDQSLASVYNPFDVLLLFQ
                     DREFKPFWFESATPTFLIEVLKQRGVFTPTLDRLETEYELLSQFDVDQISTEALLFQS
                     GYLTIHQVQEPIIGYRQYTLGFPNREVETSLNHALLPSLGVQDGAKQRRTLFSCLQTH
                     DLTALDTHLKALYAGLPHDWYRNNPIAQYEGHYASVFYSHFAALGLDVHVEDASNHGR
                     VDMTVKFGGHIYLFEFKVVEQLPEGRALAQIKDKGYADKYRALGQPIHLIGVEFSRQQ
                     RRVVGFDVETI"
     gene            complement(4519..6522)
                     /locus_tag="VIC30_05830"
     CDS             complement(4519..6522)
                     /locus_tag="VIC30_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011485440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEY7803937.1"
                     /translation="MSGTQTQPATALRRARWDLVNQGQCNALPGVDERVIRSWKRSLQ
                     AGLMPTGRLADGEPVLATELEHIRQKHREMISHSQPVMEVLFEQLRHSHSMVILANAQ
                     GLLMHTLGDLDFLTRAQRVALACGANWHENERGTNAIGTALVEGRAVQINGGEHFLER
                     NGFLTCAASPILSARQDLLGILDISGDQRGHHSHALGLASTAARLIENRLLLANHAHQ
                     IVLHLHATPEGLSTVAEGLVVVSLDGWITGANQTGLRMLAIAAEDLGALELNAVFDCT
                     ADQLAGWAASAAHATKWLRGTRGQRWACMVDWQQGTTVTHSMANTTSSKTTQTSSVTA
                     GAQHSTQPSQLEMPVPTDPFAAIDTGDQQVHAIVEKARRVAGKSITVLLQGESGVGKE
                     WLAKAIHEASHHARAPFVAINCGAIAEHLIEAELFGYAPGAFTGASKQGSLGLLRQAS
                     GGTLFLDEIGDMPLHLQNRLLRVLQERQVVPVGAQQAVPVDFNLICATHCHLKQAAQA
                     GTFRTDLFYRINGLTLSMPPLRERTDLATIAARMLKTLAPDRQLTFAPAVKTAVMQHP
                     WLGNLRQLHSVLQTAVAMLGEDEHVIDFVHLSEDWLQAVMEREPTSDACASTRLPAHQ
                     SLQALNRQVIEQVLQAHRGNVSAAARTLGISRQTLYRKLQSRR"
     gene            6962..>7882
                     /locus_tag="VIC30_05835"
     CDS             6962..>7882
                     /locus_tag="VIC30_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015016223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY7803938.1"
                     /translation="MTLYSAPGAPDAKVQYKNQYENFIGGKWVPPVKGDYFDVVTPTT
                     GKVYTKAARSTAEDVELALDAAHAVAEQWGKTDHGTRSNVLLKIADRIEANLEMLAYA
                     ETVDNGKAIRETLNADIPLAADHFRYFAGALRAQEGSISEIDENTMAYHIHEPLGVVG
                     QIIPWNFPILMAAWKLAPALAAGNCVVLKPAESTPISILLLAELIADLLPAGVLNIVN
                     GFGREAGMPLASSKRIAKIAFTGSTSTGRVIAQAAANNLIPATLELGGKSPNVFFADI
                     MDKDDAFLDKAIEGLVLFAFNQGEVCTCPSR"
BASE COUNT         1801 a         2203 c         2098 g         1780 t
ORIGIN      
        1 cgtctatggg agagtgcggc gctgctgttg gtggcattta ctttatttgt gcctaggttt
       61 tggcttgatc aggtacaaga cccgtttgag actaaaccac cagtgacatt ggctcaggta
      121 gcagacgacc ttgaagtcgg cgatcgagtg cggtttgtgg tgcgtggacc ctcatttacc
      181 acaggcgacc ccgtggactt gaccttgtcg cacgttgtga ccgaacaaga cccagggagc
      241 aaccgtctgc aagagcaagg catgatgttc ttacccgagg gcgagcgctt gttcctagac
      301 gagcctatgt tcaatacccc atatcaagaa aagctttctg gctttgattt ctacctagat
      361 gatcgggtcg aagttgtgag cgtcttgtca ccggcacaac gactaccaaa acaagtgttc
      421 tatatccccg ctattgggtt attgttgttg atcattgtgt tgcaacgtcg acgtcaaacc
      481 aagcccgcgt tttaaacaaa aagcgaaggc accatgtaca aaaacattct gttgcccgtg
      541 gatctgtccg atgagatgag ttcaagcaaa gccttggctg ctgcgcttga tctcaccacg
      601 gctgacacca cgttgcacgt ggtctcggta ttgccctcgt tcggtagcgc ccaagtcgcg
      661 ggctacttct ctgctgactt tgaaaaacaa gcgctcaaac acttgggtga tgaactctgc
      721 gcctgggttc aagcgaaagt acccaatgac atcaaggtca aaccccatgt gctgcacggc
      781 acgatctatc acgaagtatt aacggctgcc gacaaactcg cagctgacct gattgtgatc
      841 ggtgcgcacc gcccagaact aaaagactat tttttaggac ccaatgccgc acgcatcgtg
      901 cgccatgcca aaccctctgt atttgtcgtc aggaactgaa tccatcatgg ctcatcacat
      961 ttttggtcgt accgctaagt ccaccatgcc cgttgccgtc caaggcgatg gctgctacat
     1021 cattgacgat cacggcaagc gctacttcga tggctcgggc ggtgcagccg tctcctgcct
     1081 tggccactcc aatgaagccg tgcgcagtgc ggtgcgtgat cagattgacc aactggagtt
     1141 tgctcacacg gggtttttta cgacaccggt ggctgagacg cttgccgata gactgatcgc
     1201 ccacgccccc gaaggtatcg atcgggtgta tctggtctcc ggtggctcgg aagccgttga
     1261 ggcggcgatc aaactggcac gtcaatactt tctggaaatc ggcgagcctg accgtcatca
     1321 cgtgattgcc agacgtcaga gttatcacgg caatacgtta ggcgcattag ccgccggtgg
     1381 caatgaatgg cgccgggcgc agtttgcgcc gctgcttgtg cccaccaccc acatttcacc
     1441 gtgctatgcc tatcgcggcc agcaagacga tgagacactg gaacaatacg gattgcgtgt
     1501 ggccaatgag cttgaaactg aaatcaagcg tctcgggcct gaaaccgtca tggcctttat
     1561 cgctgaaccc gtggtcggtg cgacctcagg tgcggtgccg tcggtgccag ggtatttcaa
     1621 gcgtgtgcgc gaaatctgcg atcagtacgg cgtactactg attcttgatg aagtgatgtg
     1681 tggcatgggt cgcaccggtc atctctttgc ttgcgagcac gacggcatca ccgctgacat
     1741 gattacgatt gccaaaggcc tcggtgctgg ctatcagccc atcggtgcgc ttttaaccag
     1801 tcaaaaaatc tacgacgcca tcgcacaagg gtcaggtttt tttcagcatg ggcataccta
     1861 tctgggccac ccagtggcag cggctgccgc caatgcggtg cttgatgtgt tgaccagcga
     1921 cggcatgatg gatcatgtca cctcacaagg caacaagctg caagccgcgc ttgaagcctc
     1981 gctcggtgat catcccaatg tgggtgacat ccgcggccgt ggtctgtttc gtggcgtgga
     2041 gctcgttgaa aaccgagaca caaaagccgt atttgatccg gcgcgcaagc tgcacgccaa
     2101 aatcaaagcc caagcgtttg agcgtggcct gatctgctac cccatgggtg gcacgattga
     2161 cggacgtcgc ggtgaccacg tgctgctcgc cccgccattc atcatcgatg atgcccagat
     2221 tgaagaagtg gtgaccaagc tcacgcagtc cattgaggcg gcgttgcagc aggggtgagg
     2281 tcgagacgat ttaaccgagg cgcatcgcga aaacagatgt accactacac agacggcggg
     2341 ttgcgcaatg tatggctggc aaacggctac gagatcaaac aaacgcccta tggcgaaggt
     2401 gtggtgtttc acaacctcga cggattgacc cgctgtattt gtctggcatt gacccgcaag
     2461 ccatccaagc taacgggtgc cgagtttcgc tatatccgta gcgctggcat gttgctttcg
     2521 caaccagccc taggcaagct gataggcatc gatgggcaat cagtcgcccg ctgggaaaaa
     2581 acagcaaggt tccacgctgg gctgataagt tattgcgctt gctatacacc gcccatgccc
     2641 aagggaatga acccattgcc aatgcggttg aacggatcaa gaccgttgag cgcctggtca
     2701 aacaaaaaat cgttgtgacc gaatcccgcg gcaaatggcg catggatcta agggaagacg
     2761 aaactcctgt tcaatagccg ttgctagaac gccgatactt tcttgcctca cagaccagta
     2821 ggtttctatt gacgctgggg tgacagtgcg ttgacggtga gcctaccgcc tcattaccca
     2881 caaacctaac tcggttatcc cctatgcgac agtgttagac tgcgcttcac aaggcgtttt
     2941 taacggagtc ggccgtgccc acagcccagc gtcgcaaact tcccattggg atacagacct
     3001 tctcggaaat tcgcgaaggt cagtattact acgtggataa gacggcgcac atcgacaagc
     3061 tagttaacca gaacaagtac tactttctgt cgcgaccacg ccgcttcggc aaaagcctgc
     3121 tactcgatac gctggactgt ttgttttcag ggcggcagtc actgtttacc ggactatata
     3181 ttgaagacag gtggcaatgg gatacccgcc accctgtgat tcgattgagt ttcggcagtg
     3241 gcgtgatgag cagccgcgaa acgctggatc agtacattca cgagttgctc aacgctgaaa
     3301 ccaaaagact tgggttgaca ttgaccaacg ccagcattgc tgggcgtttc aaagagctga
     3361 tccaactggc tcaccaacat tttggtgagc cagtggttgt ccttatcgac gaatacgaca
     3421 aacccatttt ggacaacatc tgcgactcag accgcgcact tgagttgcgt gagggtctaa
     3481 taaacctata cagcgtcatc aaagatgccg atccacacct taagtttgtg atgctcactg
     3541 gcgtgactaa atttagcaag gtcagcctgt tttctggtct aaataactta cgtgacatca
     3601 cgctttcgcc agactttgcc gatatttgtg gctataccga tgtggacatt gacagcgttt
     3661 ttgacgcaga gctgggcgat ttcgatcgac aacaaatcaa ggactggtac aacggctacc
     3721 gttggggcga ccagagcttg gcatcggtct acaacccctt tgatgtgctg ttgttatttc
     3781 aggatcgaga attcaagccg ttctggtttg aatcagccac gccaaccttt ctgatcgagg
     3841 tgctcaaaca acgcggtgtc ttcaccccaa cactcgaccg tttggaaacc gagtacgaac
     3901 tgctaagcca gtttgatgtg gaccagatca gcaccgaagc ccttctgttc caaagtggat
     3961 acctgactat ccatcaagtg caagagccca tcattggcta tcggcaatac acactgggtt
     4021 ttcccaaccg tgaagtcgaa accagtctga accacgcact gttgccgtca cttggcgtgc
     4081 aagacggcgc caagcagcgc cggacactgt ttagttgcct tcaaacccat gacctgactg
     4141 cgctcgatac acacctgaaa gcactatatg ccggtctgcc acacgactgg tatcgcaaca
     4201 accccattgc tcagtacgaa ggacattacg ccagcgtgtt ttacagccat tttgcggcct
     4261 tgggacttga tgtccatgtc gaggatgcca gcaaccacgg cagagtcgat atgaccgtca
     4321 agttcggcgg ccacatctat ctgttcgagt tcaaggtggt agagcagtta ccggaaggcc
     4381 gggcgctggc acaaatcaaa gacaaaggct atgccgacaa ataccgggca ctcggtcaac
     4441 ccatccatct catcggggtg gagttttcaa ggcagcagcg gcgagtcgtc ggatttgatg
     4501 tcgagacgat ctagccgctt agcggcgcga ctgtagcttg cgatacagtg tctgacggct
     4561 gatacccaac gttcgggctg ccgccgacac attacctcga tgggcttgca agacttgctc
     4621 aatcacctgc cgatttaatg cctgaaggct ttggtgggct ggcaatcgag tgcttgcaca
     4681 tgcgtctgaa gtcggttcac gctccatgac cgcttgcaac caatcctcgg acaaatgcac
     4741 aaaatcaatg acatgctcat cctcaccgag catggccacg gctgtttgca acacactgtg
     4801 cagctgacgt aagttgccca gccatgggtg ttgcatgacc gcggtcttaa cggctggtgc
     4861 gaacgttaat tgccgatcag gcgccaatgt cttaagcatg cgcgcggcga tcgtggcaag
     4921 atcggtacgc tcgcgcagcg gcggcatcga cagtgtcagt ccgttgattc gataaaacag
     4981 gtcggtacga aacgtacccg cttgcgcggc ttgtttcaaa tgacaatggg tggcacaaat
     5041 taagttgaaa tccactggca cggcctgctg tgcacccact ggcaccacct gcctttcttg
     5101 caacacgcgc aacaagcggt tttgtagatg cagcggcatg tcaccaattt catccagaaa
     5161 caacgtgcca ccgctggctt ggcgcagcag acccagtgag ccttgtttgc tggcaccggt
     5221 aaatgcaccg ggcgcgtagc cgaacaactc agcttcgatc aaatgctcgg caatcgctcc
     5281 acagttaatg gccacaaatg gcgcacgagc atgatgcgat gcctcgtgaa tggctttagc
     5341 cagccactct ttgccaacac cggactcacc ttgcagcaag acggtgatgg acttaccggc
     5401 cacgcgacgg gctttctcga cgatggcatg cacctgttga tcacctgtat caatggccgc
     5461 aaagggatcc gttggcactg gcatttccag ttggcttggt tgtgtgctgt gttgtgcacc
     5521 agccgtcaca cttgacgtct gggtcgtttt gctcgaagtg gtgttggcca tgctatgggt
     5581 gaccgttgtg ccctgctgcc aatccaccat gcaggcccaa cgctgacctc gggtgccacg
     5641 cagccatttc gtggcgtgtg cggcagaagc cgcccagcca gccaattggt cggcggtgca
     5701 atcgaacacg gcgtttaatt cgagcgcacc aagatcttct gccgctatcg ccaacatacg
     5761 caggcccgtt tgattggcgc cggtaatcca gccatcgagt gacaccacca cgagaccctc
     5821 tgccaccgtg gataggcctt caggtgtggc gtgcagatgc agcacaatct gatgggcatg
     5881 gttggccaac agtagccggt tttcaatcag gcgtgctgcg gtactggcca atccgagcgc
     5941 atgtgaatgg tggcctcgct ggtcaccgga gatatccaga atacccagta gatcttgtcg
     6001 cgctgacagg atcggcgagg ccgcgcacgt caaaaaccca ttgcgctcca gaaaatgctc
     6061 gccgccgtta atctgaaccg cacggccctc aacgagtgct gtgccaatcg cattggtacc
     6121 acgttcattc tcatgccagt ttgccccgca tgccaaggcc acacgttgag cgcgtgtcaa
     6181 gaaatccaga tccccgagcg tgtgcatcaa caggccttgc gcattggcga ggatcaccat
     6241 actgtgactg tggcgtagct gctcgaacaa gacctccatg acgggctgag agtggctgat
     6301 catctctcgg tgcttttgtc ggatgtgctc aagctcagtg gcaagcaccg gctcgccatc
     6361 agctagtcgg cccgtaggca tgagaccggc ttgcaagctg cgtttccaag atcggatcac
     6421 ccgctcatcg acaccaggca gtgcgttgca ttgaccctgg ttgaccaagt cccaccgagc
     6481 gcggcgaagc gcggtggccg gttgtgtttg tgtgccactc atctttcgtc tcctgcatcg
     6541 gcactgaccc aagattgcat tcggtcaaac tgatgcctgt catcaaacag cctggtctta
     6601 cagcttgccg tgcatcgtgc aagttgtttt cttactttct tgttatcgaa ttagtgtagt
     6661 gactatctgc tctcgtggca ttgttccatg acaaaggtgt tgcaactgtt gcattttgtg
     6721 acaggtgttg cgaacccata ccggacagtt cagtaaaaaa acagcttgag gcaaggaact
     6781 gcctcaagaa agggcctaaa cccctcgcgg ttccccccgt gcctgctcct acgcatcccc
     6841 cttgcccacc attgcactta cccaaccaac ccgcaaaacg tatctggcac gcgatttgcg
     6901 tagaaagtga caggccagca ttcatcgtgc tcgccatatg gtcaaaccaa caggagacga
     6961 catgacacta tattcagccc caggcgcacc cgatgccaag gtgcaataca agaaccaata
     7021 tgaaaacttt atcggtggca agtgggtccc acccgttaaa ggtgattact ttgatgttgt
     7081 aacgcccacc accggcaagg tctacaccaa ggccgcacga tcgaccgctg aagatgtcga
     7141 gctcgcacta gacgctgccc acgcagtggc tgagcagtgg ggtaagactg atcacggcac
     7201 acgcagcaac gtgctgttaa aaatcgccga tcgcattgaa gccaatctcg agatgctggc
     7261 ctatgccgag accgtcgaca atggcaaagc cattcgtgag accttaaacg ccgacatccc
     7321 gctcgcggcc gatcacttcc gctactttgc cggtgccctg cgagcccagg aaggcagcat
     7381 cagcgagatc gacgagaaca ccatggctta tcacatccat gagcccttgg gcgtggtggg
     7441 ccaaatcatt ccctggaact tcccgattct gatggcggca tggaaactgg ccccggcact
     7501 ggccgcaggt aactgcgtgg ttttaaagcc tgctgagtcc acaccgattt ctattttgct
     7561 gctcgctgaa ctgattgccg accttttacc ggccggtgtg ctgaacattg tcaacgggtt
     7621 tgggcgtgaa gccggcatgc cattggctag cagtaagcgc atcgccaaga ttgctttcac
     7681 ggggtcaacg agcacgggac gtgtgattgc tcaggcggcc gccaacaacc tgattccggc
     7741 cacgctcgaa cttggcggta aatcgcctaa cgtgttcttt gccgacatca tggacaaaga
     7801 cgatgcgttc ttggacaaag ccattgaagg cttggtgttg tttgccttta accagggcga
     7861 ggtctgcacc tgcccaagcc ga
//
LOCUS       DATBNL010000342         1648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_14342, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000342 DATBNL010000000
VERSION     DATBNL010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14342"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VIC30_05840"
     CDS             <1..265
                     /locus_tag="VIC30_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011515971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEY7803939.1"
                     /translation="SHLFAGGYGAGYYSYKWAEVLSADAFAAFEEAQSTLDPTTGDLF
                     RREILSVGGMRPAAESFKAFRGRDPQIEALLRHSGMVDETVAA"
     gene            574..1452
                     /gene="folD"
                     /locus_tag="VIC30_05845"
     CDS             574..1452
                     /gene="folD"
                     /locus_tag="VIC30_05845"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009522502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEY7803940.1"
                     /translation="MTDQSPARLIDGKALAARIRVKLKQKIDTLVADGNAKPGLAVIL
                     VGADPASAVYVRNKIRACEEVGITSFHETCDADLPEAELLAKIAELNADPTVHGILVQ
                     LPLPKHIDPQKVIEAIDPSKDVDGFHPANVGLLAIGRPRFIPCTPFGVMKMLEDEQVP
                     LRGATACVVGASNIVGKPMTLLLQAAGATVTICNSKTRDLAFHTKHADVLVVATGRPK
                     MITGERIKPGAVVIDVGINRLDDGSLCGDVDFASASEVASAITPVPGGVGPMTIAMLL
                     ANCVGSAKSHAAVAKP"
BASE COUNT          396 a          441 c          448 g          363 t
ORIGIN      
        1 tagccaccta tttgccggcg gctatggcgc gggttactac agttacaagt gggcagaagt
       61 tctctcggcc gatgcctttg cggcctttga agaggcgcaa agcacgcttg accccaccac
      121 gggtgatctc ttccgacgtg aaattctctc tgtgggtggc atgcgtccgg cagcagaatc
      181 gtttaaggcc ttcaggggcc gtgacccgca aatcgaagcg ttgctgcgcc actccgggat
      241 ggtcgatgag acggtggcgg cttagttccg gtttggacgc ttggtgtgga cgatcattga
      301 atgcagggtt gatgactgaa gaaaaatcaa atcaaaatac agctgaaatt ccgcaaaacc
      361 aaagccaaaa acaccaaccc cggcgtttta atagaataga ggctcggact tagaagctga
      421 gcttaaaact aagcttcgaa accaagctca cgattgaacc gtgagcttgg tcctattttt
      481 agtcggccct tgttaattgt cccggcaatc gctcttttgt tagagcgctt tctgagcgct
      541 ttcggatgtg tatttttatt gagccccaag accatgacag accaaagccc cgcacgactg
      601 attgacggca aagcgctcgc agcgcgcatt cgcgtcaagc taaagcaaaa aatcgatacg
      661 ctggtcgctg atggcaacgc caaaccaggg cttgcagtga ttctcgtcgg tgctgatcca
      721 gcatccgcgg tttacgtgcg caacaagatc agggcctgtg aagaagtcgg tatcacctcg
      781 tttcacgaga catgcgatgc tgacttgcca gaggctgagt tactggccaa gattgctgag
      841 ttaaacgccg atccaacggt gcacggtatc ttggtgcagt taccgctacc caaacacatt
      901 gacccacaaa aggtcattga ggcgattgac ccgagcaaag acgtcgacgg gtttcatccg
      961 gccaatgtcg gactgctcgc tatcggtcga ccacgcttta ttccctgtac accgttcggc
     1021 gtcatgaaaa tgctcgaaga cgagcaagtg ccactgcgtg gtgccacggc ttgcgtggtg
     1081 ggtgctagca acatcgtggg caaacccatg acgctgctgc tgcaggcagc tggcgccaca
     1141 gtcactatct gcaattccaa gacccgggat ttggcgtttc acaccaaaca cgctgacgtg
     1201 ctggtggtag ccacggggcg acccaagatg atcacgggtg aaaggattaa gcccggtgcg
     1261 gtggtcattg atgtgggcat taaccgctta gacgatggca gtttgtgtgg cgacgtggat
     1321 tttgcgagtg ctagtgaagt cgctagtgct atcacaccgg tacccggtgg cgtgggcccc
     1381 atgacaattg ccatgctgct ggccaattgc gttggcagcg ccaaatctca tgcagccgtc
     1441 gctaaacctt gagtaaaacc accgtaacac catcccaagt atgactaacg acacccccaa
     1501 agaaagcacc gccggcactg ctgacaccgt cacccgagaa gagttgcacc accgtcaact
     1561 cgacctgcgc ttttacaaac gctcggatgg tttctacgag gtggtggcgc aaatgatgga
     1621 caccaagtcg catccattta agttgcaa
//
LOCUS       DATBNL010000343         1717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_93854, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000343 DATBNL010000000
VERSION     DATBNL010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93854"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /gene="nuoG"
                     /locus_tag="VIC30_05850"
     CDS             complement(<1..1223)
                     /gene="nuoG"
                     /locus_tag="VIC30_05850"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HEY7803941.1"
                     /translation="MVALTIDGKNVEVPEGSMVMHAAHKLGVYVPHFCYHKKLSIAAN
                     CRMCLVEVEKAPKALPACATPATNGMIVHTCSEKAVAAQKAVMEFLLINHPLDCPICD
                     QGGECQLQDLAVGYGGSESRYEEEKRVVFHKDLGPLVSAEEMSRCIHCTRCVRFGQEI
                     AGVMELGMLNRGEHSEITTFVGRSIESELSGNMIDICPVGALTSKPFRYSARTWKLAR
                     RKAISPHDSLGANLVVQVKRDEVMRIVPFENEEINECWISDRDRFAYEGLHEDRLTVP
                     MIKGDDGQWQEATWSDALQVVAKGLSQVRDEFGASQIGFVGSEQCTLEELSLLSRVAH
                     GVGSPNVDARARLTDPDWDEARNGVPYLGMSIASLGELDRVLVVGSFMRADHPLMTQR
                     LRQAAKHGTQVSGIDL"
     gene            complement(1236..>1717)
                     /locus_tag="VIC30_05855"
     CDS             complement(1236..>1717)
                     /locus_tag="VIC30_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HEY7803942.1"
                     /translation="ELAGGMRNGHQLKAVIPGGSSAPVIPGEIMMDTTMDYDAIAKAG
                     SMLGSGAVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWLYRMVHRIEHGQG
                     RPEDLDKLDSVAGNIMGRTICALGDAAAMPVRGFLKHYRDEFAYHIENKRCVVAPYL"
BASE COUNT          419 a          508 c          418 g          372 t
ORIGIN      
        1 aggtcaatgc cgctgacttg cgttccgtgt ttggcggcct gacgcagccg ctgcgtcatc
       61 agtgggtgat cggcgcgcat gaacgaaccg acaaccaaca cacgatccaa ttcaccgagg
      121 ctggcaattg acatgccgag atacggcacg ccattccttg cctcatccca atcgggatca
      181 gtcaaccggg cacgagcatc aacgttaggg ctaccaacgc cgtgcgcaac acgtgacaag
      241 agggataact cttcaagcgt gcactgctcc gaacccacaa aaccaatttg tgaggcgcca
      301 aactcatcac gaacttgtga caaacccttg gcaaccactt gcaaggcatc cgaccaagtt
      361 gcctcttgcc attgcccatc atcgcctttg atcatgggaa cagtcagacg gtcctcatgc
      421 agtccttcat aagcgaaacg atcacggtca ctgatccagc attcgtttat ttcttcgttt
      481 tcaaacggca cgatacgcat gacctcatcg cgctttacct gcacgaccag attcgcgcca
      541 aggctgtcgt gcggcgagat ggctttgcgt cgcgccaatt tccaagtacg ggcggaataa
      601 cgaaatggtt tagatgtcag cgcgccaaca ggacaaatat caatcatgtt gcccgagagt
      661 tcggactcga tcgagcgacc aacaaaggtg gtgatttctg aatgctcacc acggttgagc
      721 atgccaagtt ccatgacgcc ggcaatttcc tgaccaaaac gcacacaacg cgtgcagtga
      781 atgcaacgcg acatctcttc ggctgagacc agtggaccta aatccttgtg aaacacgacg
      841 cgcttttctt cttcatagcg cgattcagaa ccaccatagc caacagccaa atcctgcaat
      901 tgacattcac caccttgatc gcaaatggga cagtcaagcg ggtgattgat caacaaaaac
      961 tccatgactg ccttttgagc agcaacggct ttttctgagc aagtgtgcac gatcatgccg
     1021 ttggtggcag gcgtggcgca agccggcaat gccttgggcg ctttttcgac ttcaacgagg
     1081 cacatacgac aattggccgc gatcgacagc ttcttgtgat aacaaaagtg cggcacgtag
     1141 acaccaagct tgtgggcggc atgcatcacc atgcttccct caggtacttc tacgttcttg
     1201 ccgtcaatgg ttaatgcaac catggtccgt ccaaatcaaa ggtaaggtgc cacgacacat
     1261 cgcttgttct cgatgtggta ggcgaattcg tctcggtaat gctttaagaa accgcgcaca
     1321 ggcatcgccg ctgcatcacc gagcgcacaa atggtgcgac ccatgatgtt gcctgccacc
     1381 gaatcaagct tgtccagatc ctctgggcgg ccctgaccgt gttcgatgcg gtgcaccatg
     1441 cggtagagcc aacctgtgcc ttcccggcac ggggtgcact ggccacagct ttcttcgtaa
     1501 taaaagtacg acaggcgaag cagcgacttc accatgcaac gtgtttcatc catcacaatg
     1561 actgcgcccg aacccagcat tgaccccgct ttggcgatcg catcgtagtc catggtggtg
     1621 tccatcatga tttcgccagg aatcaccggc gcactcgacc cacctgggat caccgcttta
     1681 agctgatgcc cgttacgcat accaccagcg agttcca
//
LOCUS       DATBNL010000344         4158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_3881, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000344 DATBNL010000000
VERSION     DATBNL010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4158
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3881"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..884)
                     /locus_tag="VIC30_05860"
     CDS             complement(<1..884)
                     /locus_tag="VIC30_05860"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011296458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HEY7803943.1"
                     /translation="MDDSHLPKALQNLALPVIAAPLFTVSYPELVLAQCQAGIVGSFP
                     ALNARPAELLDTWLSEMKVALAQFKADNPDKPVGPIAVNQIVHDSNVRLMQDVQTCVK
                     HEVPIIITSLRAPVPEIIDAVHAYGGIVLHDVINMRHAAKALEAGVDGLIVVAAGAGG
                     HAGAQSPFALVGELRRHYQGPVILSGAITTGSAVLAAQAMGADLAYIGTRFIASAEAH
                     AVQDYKEAIVRASASDIIYTDLFTGVRGNYIRESIERAGLDPNNLPSNQTDMNFASGT
                     SKPKSWKDIWGAGQGVGQ"
     gene            complement(936..1580)
                     /locus_tag="VIC30_05865"
     CDS             complement(936..1580)
                     /locus_tag="VIC30_05865"
                     /inference="COORDINATES: protein motif:HMM:NF016207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HEY7803944.1"
                     /translation="MYLPKHFVPTDPQAPALIVRHYPLAQVVRLDADGHLACDPIPLL
                     MQGELKAGASLLGHVARANVLWQQQGAVLAIFAGPRAYVTPNAYPGKAEHHRVVPTYN
                     YATVQVSGQLVAHDDPVRTLEIVRLLTEAAETSQPAPWSVDDAPEDFVQANLRAIVGI
                     EIQIESVVTKFKLSQNKSGTDHAGVLDYLAGSAADSDAADMIKLMTDHQKPTSS"
     gene            1670..3292
                     /gene="garD"
                     /locus_tag="VIC30_05870"
     CDS             1670..3292
                     /gene="garD"
                     /locus_tag="VIC30_05870"
                     /EC_number="4.2.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019044227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008867 - galactarate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0046392 - galactarate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate dehydratase"
                     /protein_id="HEY7803945.1"
                     /translation="MNEHTQNTQPQDNQPTPVTIQMHPKDNVAVVANDGGLPAGSVLT
                     NGLTLVERIPQGHKVALESIAQGEAVKRYNVVIGWAKDSIAAGSWIHESRLDLPEPPT
                     LANLPMATILPEPKPAPQPALEGYTFEGFRNRDGSVGTRNILAISSTVQCVSGVIEFA
                     VKQIRQTLLPKFPNVDDVVSLEHTYGCGVAIDAPGAEIPIRTLRHLAQNPNFGGEVMV
                     VSLGCEKLQPERLMPEGTINIHPDQIGSIADERWGDLDVVCLQDKAHVGFQSMIEHIM
                     RQAEQHLARLNARKRETVPASELVVGMQCGGSDAFSGITANPVLGIASDLLVRAGATV
                     MFSEVTEVRDGIAQLTARAASPAVAQELIDQMQWFDAYLARGGVDRSANTTPGNKRGG
                     LSNIVEKAMGSISKSGSAAIAGVVAPGERLNGKRGLVFNASPASDFICGTLQLAAGMN
                     LHIFTTGRGTPYGLAACPVIKVATRSDLARRWHDLMDVNAGEVADGTKTIEALGQEMF
                     ELILRVASGQQTWAEQWQLHNSLALFNPAPVT"
     gene            3295..3591
                     /locus_tag="VIC30_05875"
     CDS             3295..3591
                     /locus_tag="VIC30_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase with chaperone activity"
                     /protein_id="HEY7803946.1"
                     /translation="MSFDRQINIPASFLLLYTPAGRAKPTPPRQWLEDRHDLCEDLAQ
                     LLTEKVKDKIWQLGITPSDAIERIERGLPDLGLELSEAECQWVMTRVHEILQWS"
     gene            3699..>4158
                     /locus_tag="VIC30_05880"
     CDS             3699..>4158
                     /locus_tag="VIC30_05880"
                     /inference="COORDINATES: protein motif:HMM:NF014345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HEY7803947.1"
                     /translation="MKHTRLNRWLASLIATFMMLGPVAAHACTSFLLTGSDDGFVYGR
                     SLEFGVDIDSRGITIPRNIAMQGTGVDGKEGTGKKWTTQYAAIGAAALGLPILVDGLN
                     EKGLAGGMLYAPGITEYQEVEPVESGNSIASYEMLVYALTNFATVDEAREG"
BASE COUNT          978 a         1152 c         1139 g          889 t
ORIGIN      
        1 atttgcccaa ccccctggcc agcgccccaa atgtctttcc aactcttggg tttactcgtg
       61 ccagaagcaa agttcatgtc cgtctgatta cttggcaagt tgttagggtc caaaccggca
      121 cgctcaatgc tctcgcgaat gtagttgcca cgcacaccgg taaacaaatc cgtgtagata
      181 atgtccgatg cactggcacg cacaatcgcc tctttatagt cttggaccgc atgggcctcg
      241 gcactcgcga taaagcgcgt gccgatatac gccaaatcag cgcccatagc ctgggcggct
      301 agaaccgccg aaccggtggt gatcgccccc gacaagatca cgggcccctg gtagtggcgt
      361 ctaagctctc ctaccaacgc gaagggtgac tgcgccccag catggccgcc agcacccgca
      421 gccaccacaa tcaaaccgtc gacaccagcc tctagcgcct tggcagcatg acgcatgttg
      481 atgacgtcat gcaacacaat cccaccatag gcgtgcacgg cgtcaatgat ttctggcact
      541 ggtgcacgca aagaggtaat gatgatcggc acctcgtgtt tgacacaggt ctgcacgtcc
      601 tgcatgagac gcacattgga gtcatgcacg atctgattca cagcaattgg acccaccggc
      661 ttgtctgggt tgtccgcttt gaattgcgcc agagcaactt tcatctccga caaccacgta
      721 tcaagtaact cagccggtcg tgcattcaga gcgggaaacg accccacgat gcccgcttgg
      781 cactgtgcta gcaccagctc cgggtagcta accgtaaaca acggtgcggc tataactggc
      841 aaagccaagt tctgcagggc tttgggcaga tgagagtcat ccatgatggg cgctacctcg
      901 agatggtgtg gtggtggttt gggggtggtt ttgtattaac tcgatgtcgg tttctgatga
      961 tctgtcatga gttttatcat gtcggcagcg tcgctatcgg ccgctgaacc tgccaaatag
     1021 tcgagtacac cggcatggtc cgtaccggat ttgttctggc taagtttgaa cttcgtcacc
     1081 accgattcga tctggatctc aatacccaca atggcacgca aattggcctg aacaaagtcc
     1141 tcaggcgcat cgtcaaccga ccagggcgcg ggctgcgatg tttcagcggc ttcggtgagc
     1201 aaacgaacga tttccagcgt ccgaaccggg tcgtcgtggg caacaagctg accgctgacc
     1261 tgcaccgttg catagttata ggttggcacc acccggtggt gttcggcctt acccgggtac
     1321 gcattgggcg tgacgtacgc ccgagggcct gcaaaaatcg ccaacacagc gccttgctgt
     1381 tgccacagca cgttggcacg cgcgacgtgc ccgagcaagc tggcacccgc tttaagctcg
     1441 ccttgcatca ataaaggaat cgggtcacag gccaagtgac catcagcatc gagcctgact
     1501 acttgagcca atggatagtg gcgcacaatt aacgctggtg cctgtgggtc ggtcggaacg
     1561 aaatgtttgg gcaaatacat gttgatttca acgattaagc ggctgttggg gtgttcaatt
     1621 gtgttgcaac acactacgct tatagcacca tgaaacagtc gctacccaaa tgaacgaaca
     1681 cacacaaaac actcagccac aagacaatca gcccacaccc gttaccatcc agatgcatcc
     1741 taaggacaac gtggccgtag tcgccaatga tggcggcttg ccagcgggta gcgttttaac
     1801 caatggtctg acgttggttg agcgcatccc ccaaggccac aaagtggcgt tggagagcat
     1861 cgcgcaaggc gaggcggtca agaggtacaa cgttgttatt gggtgggcca aagactcaat
     1921 tgccgcaggc agctggattc atgagtcccg attggacttg ccagaaccgc caacactggc
     1981 aaacttgccg atggcaacga tcctgcctga gccaaagcca gcaccacagc cagcgctcga
     2041 gggctatacc tttgaagggt ttcgcaatcg agacggcagt gtcggcacac gtaatattct
     2101 ggccattagt tctaccgtgc aatgcgtaag cggcgtaatt gagtttgctg tcaaacaaat
     2161 ccgtcaaaca ctcctaccca aattccccaa tgttgatgat gtggtgtcgc ttgaacatac
     2221 ctatgggtgt ggtgtggcca ttgacgcgcc cggcgccgag attcccattc gcaccttgcg
     2281 ccacttggcg cagaatccga attttggggg tgaagtcatg gtggtgagct tgggctgcga
     2341 gaaactgcag cctgaacgcc tcatgccaga aggcacgatt aatatccacc ccgaccaaat
     2401 cggcagcatc gctgatgagc gttggggtga ccttgatgtc gtgtgcctgc aagacaaagc
     2461 acatgttggt ttccagagca tgatcgagca catcatgcgc caggccgaac agcaccttgc
     2521 gcgcctgaat gctcgaaagc gcgagacggt acccgccagc gaactggtgg tcggcatgca
     2581 gtgcggcggc agcgatgcct tctcaggcat taccgccaat ccggttctag ggatcgccag
     2641 cgacttactc gtgcgcgcag gcgccacggt catgttctct gaagtcacgg aggtgcgtga
     2701 tggcattgcg caactgaccg cacgggcggc ttcaccggct gtggcgcaag aactcattga
     2761 tcaaatgcag tggtttgatg cctatctggc acgcggcggc gttgatcgta gtgccaacac
     2821 cacgcctggt aacaaacgag gcggcttgtc gaacattgtg gaaaaagcca tgggctccat
     2881 cagcaaaagt ggctcggccg caattgccgg ggtggtggca cccggcgagc gtttaaacgg
     2941 caagcggggt ttggtgttta atgcatcacc agccagtgac tttatctgtg gcaccttgca
     3001 gttggctgct ggcatgaatc tgcacatttt tacgaccggc cgcggcacac cctacgggtt
     3061 ggctgcctgc ccggtcatta aagtagccac ccgcagtgat cttgcccgac gctggcatga
     3121 cctgatggat gtcaatgcgg gcgaagtcgc tgacggcaca aaaaccattg aagcattggg
     3181 tcaggaaatg tttgagctca tactgcgggt ggcaagtggc caacaaacct gggctgagca
     3241 atggcaactg cacaacagtc tggctttgtt caaccctgca ccggtgacct agacatgtca
     3301 tttgatcgac aaatcaacat accggcttct tttttactgc tctacacgcc agccggtaga
     3361 gccaaaccca cgccgcctcg tcaatggcta gaagaccgac atgatctgtg cgaagacctc
     3421 gcgcaactgc tgaccgaaaa agtcaaagac aaaatctggc aacttggcat tacgccgtct
     3481 gatgccattg agcgcattga gcgcgggctg ccggatttgg gactagaact cagcgaagca
     3541 gagtgtcagt gggtcatgac ccgcgtgcat gaaatcttgc agtggtccta acgctaaata
     3601 cagtccgcac taaatacagt ccgaaacaat ggtcgcaaag gttttagact taaactacac
     3661 cacatgaaat tgccagacca taatcaggag aaatagctgt gaagcacacc cgtttgaacc
     3721 gttggctagc aagcctgata gcgacattca tgatgctcgg ccctgttgcc gcgcatgcct
     3781 gcaccagctt tcttctaaca ggttccgatg acgggtttgt gtatggtcgc agcttggagt
     3841 ttggcgtaga catcgactca cgcggcatca cgattccacg caacatcgcc atgcagggca
     3901 ccggtgttga tggcaaggaa ggtacaggca aaaaatggac cacccagtac gctgccatcg
     3961 gcgctgctgc gctcggtctg cctatcttgg tcgacggcct gaatgaaaaa ggcttggcag
     4021 gcggcatgct ctacgcccct ggtattactg aataccaaga agtcgagccc gttgaatcgg
     4081 gtaactcgat tgcttcatat gagatgctgg tctacgcact gaccaacttt gcgactgttg
     4141 atgaggcacg tgaaggga
//
LOCUS       DATBNL010000345         8131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_123753, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000345 DATBNL010000000
VERSION     DATBNL010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 8131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8131
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123753"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VIC30_05885"
     CDS             <1..235
                     /locus_tag="VIC30_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803948.1"
                     /translation="SPNMVALMNSAPRDRSGSAGGMLALSRLLGQAIGAAAVAFCLSA
                     FGDNGIEIALWVGVAAAATSATVSAIRMTRFAR"
     gene            305..1195
                     /locus_tag="VIC30_05890"
     CDS             305..1195
                     /locus_tag="VIC30_05890"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HEY7803949.1"
                     /translation="MRARHSDIPIMPANPTARAAKPQSIPDTKVTQTLDSVKAALMTF
                     PYIDLAILFGSMAKGTQRPDSDVDVGVLSKTPLDVEQRMELVDALALALGRPVDLIDL
                     KLAGQPILNQILKHGVRICGSDTQMTDLVYRNLVDRADFLPLRNRILKGQEDTSDVSI
                     ITQKLASLSRCVQRIETVCPPTLEQLEQDIDAQDIVTLNLSRAVQLTVDISSHLLISN
                     QAPAPQTMGDSFLGMEKLGVLDSDLALHLRKAVGFRNIAVHNYEAIHWAVVYSIVTER
                     LGDFKAYASAVQAWVDKAAS"
     gene            complement(1213..2535)
                     /locus_tag="VIC30_05895"
     CDS             complement(1213..2535)
                     /locus_tag="VIC30_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010464457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HEY7803950.1"
                     /translation="MHDIICPHCHKAFKVDEAGYADIVKQVHDHEFERQLQERLDLAE
                     RDKQNAVALARAQVEREQAQAVSDQQATIQELQAKLQASEMQRQLAVTEALNKVEKER
                     DQLANQVSQLQADNQAAKALAQAQLENQLQQATATKESEILKLRSSLEQTQLTAKLES
                     QSIKERFELQIKDLDDMIDRLRDMKARLSTKMVGETLEQHCEIEFNRIRATAFHRAYF
                     EKDNDASGGSKGDYIFKDMDEAGIEIVSIMFEMKNESDTTATKKKNEDFFKELDRDRN
                     EKGCEYAVLVSLLEPDNELYNSGIVDVSYRYPKMYVVRPQFFIPIITLLRNAAMNALQ
                     YKTELAHVRSQNIDITRFEEQLDTFKNAFGRNYELASRQFQTAMDEIDKSIDHLQKTK
                     KALESSVRNLRLANDKAQDVTIKKLTRDNPTMQAKFEALEDDGQSGGE"
     gene            3035..4162
                     /locus_tag="VIC30_05900"
     CDS             3035..4162
                     /locus_tag="VIC30_05900"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7803951.1"
                     /translation="MQILSGPRQVGKTTLARAAAANFSGQNHYASADSPGLPDANWIV
                     QQWNMARRLQQNTPALLVLDEIHKIPRWSEAVKMLWDEDSFNTNPNHPLHVVLLGSSQ
                     FLMQTGTGDSLAGRFELIRLPHWSYAEMQAAFGWRVEQYILFGGYPGAAALIDDGQRW
                     RNYILDAVIEPTLSRDVLQITRIDKPALLRRLFALGCQYSGQILSFQKMIGQLQDAGN
                     TTTLSHYLTLLAGAWMMTGLDKYAGDHARSRASSPKLQVLDNAFVSALSQQPIDQTAT
                     EPDQWGRLVESAIGAHLHNNKATGIELQYWRERQHEVDFILSHGSSLVAIEVKSGRKR
                     GSLSGLNQFTKQFPHAKPLVVGTGGVPLETFLLTPPAQWLS"
     gene            4285..5625
                     /locus_tag="VIC30_05905"
     CDS             4285..5625
                     /locus_tag="VIC30_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018905761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HEY7803952.1"
                     /translation="MAAQRSNQKHLGIWINGEPVARWTVSSTGESTLHYEDCWLSSTD
                     AHPLSLSLPFHVSGQPHRGKVVENYFDNLLPDDPLQRKQLAQHYGVQTLHAFDLLEQI
                     GRDCVGAIQLWPDGHQAGDVDCVKGSALSEAQVATLLKGLRTQTASSITINNHQQDLR
                     IAISGAQDKTALLWHEGQWLLPHGATPTTHILKPPLGHIGMDRRLDMTTSVENEWLCL
                     RILAAFGLDVPRAAMLQFEDQKVFVIERFDRQLHPSGQWWMRLPQEDFCQVTGTPSHL
                     KYESEGGPGLHTIGTWLQGSSRRDKDLATLLKTQVLFWMLAATDGHAKNFSIRLLPGA
                     AYRLTPLYDVLSAWPVIGKTSSKIAQQKVKLAMALKGKNRHYDMAYIRREHFEKFGNW
                     LGLFSTTSALIDDIIERTPAVIETVSQELPTGFPDQIFTSICENMALAARQLAR"
     gene            complement(5909..7102)
                     /locus_tag="VIC30_05910"
                     /pseudo
     CDS             complement(5909..7102)
                     /locus_tag="VIC30_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011153965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
     gene            complement(7237..>8131)
                     /locus_tag="VIC30_05915"
     CDS             complement(7237..>8131)
                     /locus_tag="VIC30_05915"
                     /inference="COORDINATES: protein motif:HMM:NF039490.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803953.1"
                     /translation="NLGATAGTDVVLSGDVSVDTLDLTATAGEINQQGGSVASTGTTN
                     LGAATDITLGGANNDFSTVNADGAGITLTDTNSLTLGNVSASGNLGATAGTDVVLSGD
                     VSVDTLDLTATAGEINQQGGSVASTGITNLAAAKDIRLGGASNDFSAQVNATGADIEL
                     AAVNGVTLGDVTASGSLGATPVPDSVSDRNAGKTKDAASLPNANVGASTNTDLLTAGG
                     ASTKVLNLTARILNTRSDSTPETLSSIVASDSSEVERESLMFIYVGEWVGALSVLNVI
                     SGELLTSSQEDEEDANILRLY"
BASE COUNT         1942 a         2202 c         2026 g         1961 t
ORIGIN      
        1 gtcacctaat atggtggcac tgatgaacag cgcccccaga gatcgcagcg gcagcgccgg
       61 cggcatgctt gctctgtcac ggttgctagg acaagccatc ggtgcggcgg ccgtggcgtt
      121 ttgtttgtcg gcgtttggcg acaacggcat tgagatcgcc ctttgggttg gcgtagccgc
      181 agccgctaca tcagccacgg tcagtgcgat tcgtatgaca aggtttgcac gctgagttcg
      241 cggtgcccca agggtcttat cttcctgcta gatatgatga ccaagctaga gcggacatga
      301 gatcatgcgg gctagacatt cggacatacc catcatgcca gccaatccga cagcgcgtgc
      361 tgctaaacca caaagcatcc ccgatacaaa agtcacacaa acgcttgact cggtcaaagc
      421 tgcgttgatg acatttccat atattgacct tgcgattctg ttcggttcaa tggccaaagg
      481 gacacaacga ccagacagtg atgtcgatgt tggcgtgctc agtaaaacac cgctggatgt
      541 cgagcagcga atggaattgg tcgatgcgtt ggcactcgcg ttgggaaggc ctgtcgatct
      601 aatcgatctt aaattggcag gtcaaccgat acttaaccaa atactgaaac acggcgtacg
      661 catttgcggg tcagacacgc agatgaccga tctcgtctac cgaaacctgg ttgatcgagc
      721 agacttcctg cctttgcgca atcgaatctt aaaagggcaa gaagacacat cggatgtcag
      781 catcattact caaaaactgg cctctctttc tagatgcgta caacgcatcg aaaccgtatg
      841 tccgccaacg ctcgagcagc ttgagcaaga tattgatgcg caagatatcg tcacgctcaa
      901 tctctcaagg gcggttcaac tcacggttga cataagctca catttgctta tttccaatca
      961 ggcaccggcg ccacagacaa tgggggacag ttttttgggt atggaaaagc ttggcgtttt
     1021 agactcagac ttggctttac acctaagaaa agcggtgggg tttcgcaaca ttgcagtcca
     1081 caactacgag gctatccact gggccgtggt ctatagcatc gtgactgagc gcttgggtga
     1141 cttcaaagca tacgcaagtg ccgtgcaagc ctgggtagac aaagcagcat cctgacttgc
     1201 tgattcgcct tgctactcac cacctgactg cccatcatcc tctagcgcct caaacttggc
     1261 ctgcattgtc gggttgtcac gcgtgagctt cttgatcgtg acatcttgcg ccttgtcgtt
     1321 ggctaggcgc aggttacgca ccgagctctc aagcgctttc ttggtctttt gcagatgatc
     1381 aatggatttg tcgatttcat ccatggcggt ttgaaactga cgggatgcca attcgtagtt
     1441 acggccgaaa gcattcttaa aggtatcgag ttgctcttca aaccgcgtga tgtcaatgtt
     1501 ttgtgagcgc acgtgggcaa gctcggtctt gtactgcaag gcgttcatcg cggcattgcg
     1561 tagcagcgta atgatgggga taaagaactg tgggcgcacc acatacatct tggggtagcg
     1621 gtatgacacg tccacgatgc ccgagttgta gagctcattg tccggctcaa gcaaagagac
     1681 aagcacggca tactcacacc ctttctcatt gcggtcgcga tcgagttctt taaagaagtc
     1741 ttcgtttttt ttcttagtgg cggtggtgtc tgattcgttt ttcatttcaa acatgatcga
     1801 gacaatttca ataccggcct catccatgtc cttaaatatg tagtcccctt tgctgccgcc
     1861 gcttgcgtcg ttgtctttct cgaaataggc tcgatgaaat gccgtggccc gtattcgatt
     1921 gaattcaatt tcgcaatgtt gctcaagcgt ctcacccacc atcttggtcg agagccgtgc
     1981 tttcatgtca cgcaaccgat caatcatgtc gtcgaggtct ttgatctgca attcaaagcg
     2041 ctctttaatg gactgcgatt caagcttggc tgtcagctgg gtttgctcca gactgctcct
     2101 tagtttcagg atttcagatt ctttggtcgc cgtggcttgc tgtaactggt tttctaattg
     2161 ggcttgggcc aaagcttttg cggcctggtt atcagcttga agttgtgaga cttggttggc
     2221 caactggtca cgctctttct caaccttatt cagagcctcg gtcacagcca actgcctttg
     2281 catttcgctg gcctggagct tggcctgcaa ctcctgaatg gtggcttgct gatctgaaac
     2341 tgcctgggct tgctcgcgct cgacctgcgc gcgcgcgagc gccaccgcgt tttgtttgtc
     2401 gcgctcggct aaatccaacc gttcttgcaa ctggcgctca aattcgtggt cgtgcacttg
     2461 tttaacgata tcggcatagc cagcttcgtc aactttgaac gctttgtggc agtggggaca
     2521 gatgatgtca tgcatgatga aatccgttgg aatacaaaag acgcggcgaa aaccgcggcg
     2581 aaaaacacgg gaattgcctg aagtgattat tgattgtcgc agggtgtgct gcgattcatt
     2641 agctaccttc aggaagatag caacatgtta gccctaccag tgtctcaatg catgagacac
     2701 tggtcttgaa gaaacgcccc tacggatgcc tggcgctgga ttaatcaacc tacgtagggg
     2761 tgttaacagt cgcccctgaa tcgtaagggc gaaaccaccg tggccggttc ttagtctttc
     2821 aaacacgccc cttcggctgg aagacagcgt agatgcgaca aaagacaacc tgaaacccaa
     2881 atcaacggtc aatgcacgcc cagtttccgg ttgttttaca atttactaaa aatactgagt
     2941 aaaattagtc actatattga gtaaattgta aaacatgttt caacgacccc aattaactgt
     3001 tttaaatcaa agactaagcg agcccagacg ctttatgcaa attctgtctg gtccaaggca
     3061 agtcggtaaa acaacgcttg ctagagcagc cgctgccaac ttcagtggac aaaaccacta
     3121 cgcatctgct gattcaccag ggttacccga tgccaactgg atcgtgcaac agtggaacat
     3181 ggctcgccgc ctgcaacaga acacgcccgc cttattggtc ctcgatgaga tccataaaat
     3241 cccgcgttgg tctgaggcgg tgaagatgtt gtgggacgag gactcgttta acaccaatcc
     3301 caatcaccct ttacatgtcg tcctacttgg atcctctcaa tttctgatgc agactggcac
     3361 aggcgacagt ctagcgggac gtttcgaact gatacgtcta ccgcactggt catatgctga
     3421 aatgcaagcc gccttcggct ggcgcgtcga acaatacatc ttgtttggtg gctatccagg
     3481 ggctgccgct ttgattgatg acgggcaacg ctggcgtaat tacatactag atgccgtgat
     3541 tgaacccacg ctaagccgtg acgtgttgca aatcacgcgc atcgacaagc cagcattgtt
     3601 gcggcgacta ttcgcgctgg gttgccaata ttccggccag atcctctcct tccaaaaaat
     3661 gattggtcag ctgcaagacg ccggcaacac aacgactttg tcacattatc taacgctact
     3721 agcaggtgcg tggatgatga caggacttga caagtatgct ggcgaccacg cacgaagccg
     3781 ggcgtcaagc ccaaaactac aggtgttgga taacgccttt gtgagcgctc tatcgcagca
     3841 acccattgat caaacagcca ctgagcctga tcaatggggt cgtctggtag agtctgccat
     3901 cggcgcccac ctccataaca acaaagccac tggcatagaa cttcaatact ggcgcgaacg
     3961 tcagcatgaa gtcgatttca tcctttcaca cggatcgagt ctagttgcca ttgaagtcaa
     4021 aagtgggcgc aaacgtggct cactatccgg actcaatcag ttcaccaaac agtttcctca
     4081 cgcaaagcca ctcgtggttg gtaccggcgg tgtgccactc gagacgtttt tgttgacgcc
     4141 accagcgcag tggctaagtt gatcaaacct gcttcgatag ctaagcacaa cagcaatacc
     4201 ttaaaaaaca aaacacatct gccagacttt atccggtaga ctgcgcggct tcacaaatca
     4261 gcgtattagc tcgttcacaa gatcatggcc gctcaacgct caaatcaaaa acaccttggt
     4321 atttggatca acggtgagcc tgtggctcga tggacggttt caagtacggg cgaatccaca
     4381 ttgcattacg aagactgctg gttaagttct acagacgcac acccactttc gctttcattg
     4441 ccgttccatg tatcaggcca gccgcaccga ggtaaggtcg ttgaaaacta ttttgacaac
     4501 ctgctgcctg atgatccact acagcgcaaa caacttgcac aacactacgg cgtgcagacc
     4561 ttacacgcct ttgacttgct cgagcagatc ggacgtgact gtgttggtgc gatacagtta
     4621 tggccagacg ggcatcaggc aggcgacgtc gactgcgtta aaggttcggc gctgtctgaa
     4681 gcacaagtcg cgaccttgct taaaggctta cgtacacaaa ccgcaagcag cattaccatc
     4741 aacaaccacc agcaagactt gcgcatcgcc atctctggcg cgcaagacaa aaccgcccta
     4801 ctctggcacg aaggccaatg gctattgcca cacggcgcga cacccaccac acacatactg
     4861 aaaccaccgc tgggccacat cggcatggac aggcggctag atatgaccac ctcagttgag
     4921 aacgaatggc tatgcctgcg catattggcg gcgttcggct tagatgtgcc gcgcgccgcg
     4981 atgctgcagt ttgaagacca aaaggtgttt gtgattgagc gctttgaccg gcagctacat
     5041 ccttcgggcc aatggtggat gcgtttgccc caagaagatt tctgtcaggt caccggcaca
     5101 ccctcacacc tgaaatacga atccgagggc gggccgggat tgcacaccat cggcacgtgg
     5161 ttgcagggat cttcccgacg cgacaaagat ctggccacgc tgcttaagac ccaagtcctt
     5221 ttctggatgt tagcggccac tgacgggcac gccaaaaact tcagcattcg actcctgccg
     5281 ggtgctgctt atcgtctgac accgctctat gacgtgctct cagcttggcc cgtcattggc
     5341 aagacatcca gcaagattgc ccaacaaaag gtcaaactcg ccatggcact caaaggcaaa
     5401 aaccggcact acgatatggc gtacatccgg cgcgaacatt tcgagaaatt tggtaactgg
     5461 ctggggctct ttagtaccac cagcgcattg atcgacgaca tcattgagcg tacgccggct
     5521 gtgattgaaa cggtcagcca agagctgcca actggtttcc cagatcaaat attcacatcg
     5581 atctgcgaga acatggcctt ggcggccaga caattggcgc gatgagattt gttacggcca
     5641 gtactgacca gagaaccgtt gcacttggtg ctcccaaatc cccgtatcgc cgatcatatt
     5701 cgtgcacgaa tatgatcggc gtgccttttc cagtaaccac ataaccacgc gtcaaaccaa
     5761 catcagtctg gctcgttaaa gccagatcag atggggagcc caacttatca acacaaaaga
     5821 ctccttaccg tttccctgag caattcgggg taacgctgga tcccgaagta tcacagagcg
     5881 atataggctc tttcaaaaat gaagtgggtt agctagcaaa cgggttcacc cgggcgaagt
     5941 tgagtttgcc ggctaacaag aagatcacag ccctgattat ggtgaatttt ccatagcctc
     6001 ttgctttgcg cttggcggcc tggaataaac cattgatggc ctctagaaag ccattggtct
     6061 gacgggttct ggcccaagca acaatacctt ccaggtgcgt gcgaatcatc ttggccacat
     6121 ctttcatgga ctcaaccttc gatctcatca cattgactgt ccattgccaa agcgtggcac
     6181 gcatgacatt gatttgtttg tattcgagga tctctcgtaa ctgctctcgc taggcccagg
     6241 ctcttgcggt gcgtttggtc gcgacttgcg caagaactgc agcaaggctt gaccgcgctt
     6301 gtggcttgag tgagtcatag tctttgaaca agcgccagcg catgccttta agtaaagcgt
     6361 ctgagcgttg ttcaatacga cgcgtcttgt ctagtgcctt gcaggcgtgg gcgatgacat
     6421 ggaacttgtt aaacgtgatc gtggcattgg gtaggtttgt ttccacgccc ttgatgtatg
     6481 cgggtgacat atcgatggag gccgtctcga tggccatcgg atcaccgcca tgcgctttga
     6541 gatcttccac aaaggcatcc agcgtatctg cgccacgacc ctcagtcaca aacagcacgt
     6601 ggcgctcaga tgcttctgcc actagcgtga cgtagttgtg gccgcgtgcg cgtgaggttt
     6661 cgtcaacggc caagcgtttc acctcggaga agtcagcttg tgccaacgcc aagtcaacat
     6721 acttaacgca gatagcattg accttgtacc agctcaaccc gacgagttcc gaaactgcat
     6781 taaacggcat ttcccgacac aggtaaatca ccaaggcttc aaacaacaaa gtaaagccgt
     6841 ttagcttacc ggcctaggtt ggctcagctt gcttgacacc accatctggc agtttcactc
     6901 ggggcacccg aaccacgagg tagcgcttag tcaccgtgtc atgaacggga tactctgcag
     6961 cgctctggtc aacgctaaaa cggctaccgc gggcaaaatc aatctgaatg gtcagcactt
     7021 tgtctttgac atcaaaatca acgtctttga cgaatcagga atctgtaata ccgagggctg
     7081 actgaaacag tgttgcgtgc atgactgact accttgaagc tgagatcaaa cagaaatcgc
     7141 tagtaagttc gacatggctc gattcagcgg tctgctgcac cgagccatgc gaccagcgga
     7201 tcactcctgt gaaatcatac ttagcctact taaaattcaa tagaggcgca atatattggc
     7261 atcttcctca tcttcttggc ttgacgtcaa caattcaccg gaaattacat taagcacaga
     7321 caatgcgccg acccattccc cgacgtagat gaacatgagt gactcacgct cgacttctga
     7381 tgagtcacta gccacaatcg acgacagagt ttcaggagtt gagtctgatc gggtgttaag
     7441 gattctagcc gtgaggttca gtacttttgt acttgcgcca ccggcagtta acaaatcggt
     7501 atttgtgctc gcaccgacgt tagcattcgg aagcgatgcg gcgtcctttg tcttaccagc
     7561 gttacgatcc gagaccgagt caggcactgg tgtcgcacca aggctaccgc ttgccgtgac
     7621 atcgcctaac gtcacaccat taacggccgc caactcaatg tcagcacccg ttgcattgac
     7681 ctgtgcacta aagtcattgc tcgcgccgcc cagtctgatg tccttagctg ccgctaagtt
     7741 ggttatcccc gtactggcca cgctgccgcc ttgctgatta atctcaccgg ctgtggccgt
     7801 cagatcgagc gtgtccacac tgacatcacc actgagcacc acgtccgtgc cagctgtcgc
     7861 accgaggttg ccgcttgcgc tgacattgcc tagcgtcagg ctgttggtgt cagtcaacgt
     7921 aataccggca ccgtctgcat tgaccgtcga gaagtcgttg ttcgcgccgc ctagcgtgat
     7981 gtccgtcgct gcccctaagt tggttgtccc cgtactggcc acgctgccgc cttgctgatt
     8041 aatctcaccg gctgtggccg tcagatcgag cgtgtccaca ctgacatcac cactgagcac
     8101 cacgtccgtg ccagctgtcg caccgaggtt a
//
LOCUS       DATBNL010000346         1706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_73945, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000346 DATBNL010000000
VERSION     DATBNL010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73945"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VIC30_05920"
     CDS             complement(<1..480)
                     /locus_tag="VIC30_05920"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEY7803954.1"
                     /translation="MDQIITDFSSLVGIMLIIVFLLIVFQEAINGFHDAANAIATVIY
                     ANALTPGQSVVLAAVFNFLGVLIGGTAVAFSLVYLMPENIVAGVNTQGEAALFAGMIV
                     AAVIWNFGTWWLGIPNSTTHAYIGSIIGIAMADAFLHGNSMAAQINWHQGEKIMIALI
                     "
     gene            complement(494..1333)
                     /locus_tag="VIC30_05925"
     CDS             complement(494..1333)
                     /locus_tag="VIC30_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803955.1"
                     /translation="MNKQIKQLAAGLSGSKFDSTVMHLTMRLAQQTGAGVDTYLIRPL
                     PDDPQLLMASGFLGETFKNFVQQAEKTIAEFDSTARASFEIAEKDYPTVSATYHNPLK
                     DLAREFATVIWACDMAIMAHPALVNLHYYKTAVLDAIADSARPVLLLPEDKHIGDFKH
                     VLMVWRADTTHAKALIDALPMLALADKVTLLSVTDEAYLSPGSEVAVKFLKQHGIEVN
                     DVTVDEDERLTPKLIDRACDAHDVSLLVISGGLQSDLIDSYVTGIGRRATRKPSRAIL
                     AIG"
     gene            complement(1355..>1706)
                     /locus_tag="VIC30_05930"
     CDS             complement(1355..>1706)
                     /locus_tag="VIC30_05930"
                     /inference="COORDINATES: protein motif:HMM:NF024996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY7803956.1"
                     /translation="RVGGTKVLADVATSGGDDNTNGAVFYEPGARTNQWMFGLSAPIS
                     KTSKVFASVQQLRPGGDFTLGDRTTQTTSSIGYTYNLSKRTNLYAYYSYMDGASMYSG
                     AKSQILGAGIRHIF"
BASE COUNT          398 a          424 c          480 g          404 t
ORIGIN      
        1 gatcaaggca atcatgatct tttcaccttg gtgccagttg atctgtgcgg ccattgaatt
       61 gccatgcaag aaagcatcag ccatggcaat accaatgatg gagccaatgt aggcgtgggt
      121 ggtggagttg ggaatgccca accaccaggt gccgaagttc caaatgacag cggccacaat
      181 catgccggca aacagagccg cttcgccttg ggtattgacg ccagcgacga tgttttctgg
      241 catgaggtag accaagctaa atgccacagc ggtgccgccg atgagcacgc caagaaagtt
      301 aaagaccgca gctaggacca cggattgccc cggtgtcaaa gcgttggcat aaatgacggt
      361 ggcaatcgca ttggctgcat catgaaagcc gttgatggcc tcttgaaaca caatcaacaa
      421 gaacacaatg atgagcatga tgcccaccaa gctcgagaag tcggtaatga tctgatccat
      481 ggtgatatcc ttgttagccg atcgccaaaa tggcacgact aggcttgcgc gtggcacggc
      541 gcccaatgcc tgtgacgtat gagtcaatca ggtcgctttg caagccgcca ctgataacta
      601 gcaacgacac atcatgcgca tcgcaggctc tgtcgatgag cttgggtgtc aggcgctcat
      661 cctcatcaac cgtgacatcg ttgacctcaa tgccatgctg cttgagaaat ttcacggcca
      721 cttcgctacc agggcttaag taggcctcat cggtcacgct caaaagcgtg actttgtcag
      781 ccaatgccaa catcggtagg gcatcgatca aagccttggc gtgggtggtg tcagcacgcc
      841 agaccatgag cacgtgtttg aagtcgccga tgtgtttgtc ctctggcaat agcagcacgg
      901 gacgagctga gtcggcgatg gcgtcgagta cggctgtttt gtaatagtgc agattgacca
      961 gcgcgggatg agccatgatg gccatgtcac aagcccagat gacggtggca aattcacgcg
     1021 caaggtcttt gagcggattg tgataagtcg ctgaaaccgt cggatagtct ttttcagcga
     1081 tctcgaatga tgctcgagcg gtgctatcga attcagcgat ggttttttcc gcttgttgga
     1141 caaagttctt gaaggtttct cctagaaacc cactggccat caacagttgc ggatcatctg
     1201 gaagcggtcg aatcaaatag gtgtctacac cggcgcccgt ttgctgcgcc agacgcatgg
     1261 ttaggtgcat gaccgtgctg tcgaacttgc tgcccgacaa gccggcggcc agttgtttga
     1321 tttgtttgtt cataagtctg ttactcgatt ttgtttagaa gatgtgtcta atgcctgcgc
     1381 caagaatctg tgacttggcg cctgagtaca tcgatgcgcc gtccatgtag gagtagtagg
     1441 catacaggtt ggtacgtttt gataggttat aggtatagcc aattgaactc gtggtctggg
     1501 tggtgcgatc accaagggtg aagtcgccac caggtcggag ttgctgcacg gacgcaaaca
     1561 ctttcgaggt tttgctgatc ggtgctgata ggccgaacat ccactggttg gttctggcac
     1621 ctggctcgta aaacacagcg ccgttggtgt tgtcgtctcc gcccgaggtt gccacgtcag
     1681 caagcacctt ggtgccacct acacga
//
LOCUS       DATBNL010000347         3551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_123754, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000347 DATBNL010000000
VERSION     DATBNL010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123754"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VIC30_05935"
     CDS             <1..882
                     /locus_tag="VIC30_05935"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY7803957.1"
                     /translation="MYCEFYYADQGTDVGFDPEFASHDPSDACRLRMKNVNNLLHFEV
                     ADAGISPTEWQKSTFPLPFREKIDVVHDGIQTDLLKPNANAWLELGPRKLTRTDEIIT
                     FVNRNLEPYRGYHIFMRALPKLLKARPNARVLIVGGDGVSYGTSAPAGQTWQQIFLDE
                     VKADIDMSRVHFLGRIPYHHFISLLQISTVHVYLTYPFVLSWSLIEAMSCGCAIVASD
                     TKPVQEAIRHNETGVLTPFFEAGQLADQITRLLDDPIKRQRLGQAARAFAIKHYDLNL
                     VCLPRMLSMIERYRPRV"
     gene            complement(1099..2115)
                     /locus_tag="VIC30_05940"
     CDS             complement(1099..2115)
                     /locus_tag="VIC30_05940"
                     /inference="COORDINATES: protein motif:HMM:NF025314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4214 domain-containing protein"
                     /protein_id="HEY7803958.1"
                     /translation="MAQLTYFQAIDMTEVPTWTGEFVVTEPTVFGVQGQSNAAVYSGA
                     FQYSDDGVISGVITSYDLFRDATLEAQVTGISFDATVVQQLLSQGDHAPIQAAALEGN
                     DVIRGSFEADQLIGLDGDDLIYGLSGDDTLLGGAGSDTLVGGPGNDTLIGGDGLDFAQ
                     FAGTVDQYSASRDEDGVLQINDAIAVSRDGNNALEGIERLRFADGDLALDIDGVAGEA
                     YRIYKAAFNRQPDAPGLGFWIDKMDGGATVAEVSEGFLTSQEFQQLYGVSPSDEQFID
                     LLYENVLQRTPDQSGYDFWISSMDEGVSRAQVLADFSESAENVANVAPEIANGIFYTP
                     FMGE"
     gene            2844..>3551
                     /locus_tag="VIC30_05945"
     CDS             2844..>3551
                     /locus_tag="VIC30_05945"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEY7803959.1"
                     /translation="MMEEQTGATLNSAFDQVLVGGEENDTLIGGDGNDSLDGRGGNDY
                     LDGGNGNDRLFGGTGNDYLVGSFGNDELIGYYGNDRASYRALNLSQGVVVDFGQGKVT
                     YAGATNEPGFTDTLISIERLTATDNDDVVDASQYAIVPMGNARGGAGLYNAFNLGRGN
                     DTITGNGTTALLFGDGNATTGLTVDFANQTAFSSYHGTKTILDGVNAVAATHLDDIVR
                     GGNPASDWFELYYATLGN"
BASE COUNT          880 a          894 c          882 g          895 t
ORIGIN      
        1 atgtactgcg agttttatta tgccgatcaa ggcactgacg tcggctttga ccctgaattt
       61 gcctcgcacg atccgtccga tgcctgccgc ttgcgcatga aaaacgtcaa taacctgctg
      121 cactttgagg tggccgatgc gggcatttca cccaccgagt ggcaaaaaag cacctttcca
      181 ttgccgtttc gagaaaaaat agatgtggtt cacgatggca tccaaacgga tctgctcaaa
      241 cccaacgcca acgcttggct tgagcttgga ccaagaaaac tgacacgcac agacgaaatc
      301 atcacatttg tgaatcgcaa tcttgagccc tatcgtggct accacatctt catgcgcgca
      361 ctgcccaaac tgctcaaggc aaggccaaac gcccgcgtac tgattgtagg tggcgacggg
      421 gtctcctatg gcactagtgc gccagctggc caaacctggc agcaaatctt cctcgatgaa
      481 gtcaaagccg acattgatat gtcacgggtg catttcttag ggcgcattcc ttaccatcac
      541 ttcatttccc tgctgcagat ctcgacggtg catgtctacc taacgtatcc gtttgtactc
      601 tcatggagtc tgattgaggc gatgtcctgt ggctgcgcta ttgtcgcaag tgataccaaa
      661 cccgttcaag aagctatccg gcataacgag actggcgtgt tgacgccttt ttttgaggct
      721 ggtcagttgg ccgatcagat cacgcgctta ctcgatgacc ccattaaaag acagcggctt
      781 ggtcaggcag ctcgggcttt tgccatcaag cactatgatc tgaatttggt ttgcctgcct
      841 cgcatgctgt ctatgatcga acgctatcgg ccaagggtgt aagtgtgagt tgttgccatg
      901 ggtctattgt tcttatatag ggaatatcga caacgtaaac ccgtggctga aactagcaga
      961 gcgaaagcca aagcctaaca ggctgttcag tggcattcgc gcttagctga tgctcaggcg
     1021 ctaacaacag attgagcgcc tgaacgttgg gtatcagcac accgaaaaat ctgatcccaa
     1081 ttcacgtgct aacgaagctc attcacccat aaatggcgtg taaaaaatac cgttggcaat
     1141 ttctggggca acattcgcga cattctcagc ggactcgctg aaatccgcga gcacctgtgc
     1201 ccggctaaca ccctcatcca tggacgaaat ccaaaagtca taacccgatt ggtctggcgt
     1261 gcgttgcagg acattctcat agagcaggtc gatgaactgt tcatcgctag ggctcacacc
     1321 atacagttgc tgaaactctt ggctcgttaa aaagccttcg gagacctcgg ccacggttgc
     1381 tccaccgtcc attttgtcga tccaaaagcc cagacctggc gcatccggtt gacgattaaa
     1441 tgcagcctta tagatccgat acgcctcacc agccacacca tcaatatcta gggcaagatc
     1501 accatcagcg aatctcaatc tttcaatacc ctctaacgca ttgtttccat ctcgagaaac
     1561 ggcgatggca tcgttgatct gcaaaacgcc gtcttcgtct cgactagctg aatactgatc
     1621 aacagttccg gcgaactgag caaagtccaa gccatcgccg ccgatcaagg tgtcgtttcc
     1681 cggaccgccg actaaagtgt cactacctgc gccacctagt agggtgtcat caccagataa
     1741 cccgtagatc aaatcatcgc cgtccagacc gattaactgg tctgcctcaa atgagcctcg
     1801 gatgacatcg ttgccctcta atgctgcagc ttgtatgggc gcgtgatcgc cttggctcaa
     1861 taattgctga acaacggttg catcgaaact gatcccagtg acctgtgcct ctagggtggc
     1921 gtcacgaaac aggtcgtaac ttgttattac gccactaatc acaccgtcgt cactatattg
     1981 aaaagccccc gagtaaacgg ccgcattgct ctgtccttga acgccaaata cggttggctc
     2041 tgtcaccacg aactcgcccg tccaggtggg gacttctgtc atatcaattg cttggaaata
     2101 agtcagttgt gccatttact ctcctgtgga atgactgcag ttgtgacgct tcgcacacac
     2161 ccctgtgctg tgcatcaatc aaggcgttgg aaacttctac tgctggttgc agatttgtag
     2221 gcatttccct aatgctgatc agtgacaccg ggtcgtacca gtggcaccaa gcaatgcagg
     2281 gtttcagtat tgagcgcgat gcttcaaacc gagtagttaa gaccgcacta gctggcagtg
     2341 tacaaactgt gtccatcaat gactcgataa atcgtacgaa atactaataa tttcatagga
     2401 aaatgtgtat tcggttttga tgtttagtga tcaggactta ggcgatctaa ggtatgtttt
     2461 tgacgtgctg ggtatttcat gccgaacctc gctgcattgg caagctaatc gagtgacacc
     2521 ctagctgtgg cgcgtttgct tgtgctcgct gttgtaccca gttgactggt tacttggcga
     2581 caaggcgagg ttgatgtcgt gttggaattg aagtagtagc ccctcgaatt tattgaggaa
     2641 aaaactcttc tatcaaatca catgaaacaa ctactttgtg gattgagcta cgactattaa
     2701 gcaatgtttg tgataacttt caatgctaag tctcgcgcat gatggcacgg gcagcatggt
     2761 agttcaattc tttgtggcgg caggcgtcaa taccgcttct aaacttttgt cggttttttt
     2821 cgcttaacgc gtcaagggaa tgaatgatgg aagagcaaac aggggcaacg ctaaatagcg
     2881 cgtttgatca ggttctggtt ggtggtgaag aaaacgacac gctcattggt ggcgatggca
     2941 atgattcgct agatgggaga ggcggtaacg actacctcga tggtggcaac ggcaacgacc
     3001 gtctgtttgg tggcacaggc aacgattatc tagtcggtag ttttggtaat gatgagttga
     3061 taggttatta cggcaatgat cgagcttctt atcgcgcgct gaatttatcg caaggtgttg
     3121 ttgtcgactt tggtcaaggc aaggtgacct atgctggcgc gacaaatgag cccggcttta
     3181 ctgacacact gatatccatt gagcgactaa cagccacgga caacgacgac gtggtcgatg
     3241 ccagccaata tgcgatcgtg cccatgggca atgccagggg tggcgctgga ctatacaacg
     3301 cctttaatct gggtcgcggc aatgacacga ttacaggcaa tgggacaacg gccttactct
     3361 tcggtgacgg taatgcaacc acgggtttaa cggtcgattt tgcgaatcaa acggcgttca
     3421 gcagttatca cggtactaaa accattcttg atggtgtgaa tgccgttgcg gcaacgcacc
     3481 tagatgacat agtcagaggc ggaaatccag catcagattg gttcgagctc tactatgcga
     3541 cgctcggtaa c
//
LOCUS       DATBNL010000348         1643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113590, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000348 DATBNL010000000
VERSION     DATBNL010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113590"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            569..967
                     /locus_tag="VIC30_05950"
     CDS             569..967
                     /locus_tag="VIC30_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803960.1"
                     /translation="MQLEIASLLKKANTLSAQHLPLGGSLVAYELLLNLYLHHSRGEQ
                     VTIKALFAGIPYSDMGIRYHLRKLISDGWLELQTAQHDKRTRVCVPTSQFELAWDCIM
                     SNLESAAQETLVIDRQNSQAPATRVTVKAS"
     regulatory      1017..1125
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00080"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="yybP-ykoY riboswitch is a manganese riboswitch that
                     directly binds Mn; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="manganese"
                     /db_xref="RFAM:RF00080"
     gene            1205..>1643
                     /locus_tag="VIC30_05955"
     CDS             1205..>1643
                     /locus_tag="VIC30_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004189913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HEY7803961.1"
                     /translation="MMEAFLVSTGVVAIAEIGDKTQLLALILAARFKKPIPIILGILV
                     ATVLNHGLAGALGAWLTASVEASWLQWGLGLSFIAMGFWALVPDKFDAKDAEVKGRLS
                     VFSVTFVLFFLAEIGDKTQIATVALAAHFQSAIGVVIGSTLGML"
BASE COUNT          387 a          448 c          392 g          416 t
ORIGIN      
        1 cagaagggct cccgtagtac cagaagccca gcgccggccg cgtggtcgca acccatttgt
       61 tgcaacgata ccgagttcgt cgccgttatg caatatggtc tcgtgcccat agacgcgcag
      121 acaatgccgt cacccgcagc acctcgtcaa cccgcgcacg tgcgaaatga gaagtgagcc
      181 agttttgaac tggtcaacca tccgccacca atctttcagg gctcggatca tctccgagcc
      241 ctttttcttg cgccaacgac ccacgcacgg gtggctggag ttgcccagcc taactggcag
      301 tattcccatc tgacagcgtt tattggctct accccaatgt ccaactctca gtcggcacca
      361 attccctgct gaccgctgct cacataaata tacgtaattg tctcttaaat ctcccaagga
      421 cgcgaacgtt cacgactgga gagtaatgca aaatcgatag atacactaag attttcatgc
      481 aaaattcgta gtaaaaaatc ttaggtgttt gtttcccttg ctactaagat gaaagtcatc
      541 aaatagttaa taactgtctg gcgcgacgat gcaactagaa atagccagcc tcctcaaaaa
      601 agcaaatacc ctttcggctc aacacctgcc gttaggtggt tctttggtcg cctacgagct
      661 tttgctgaat ttgtatctgc accacagtcg tggtgaacag gtcaccatca aagctctttt
      721 tgctggcatc ccctattcgg atatggggat ccgctaccac cttcgcaaac tgatctctga
      781 tggctggctc gaacttcaaa ccgcccaaca cgacaaacgg actcgggttt gcgtaccaac
      841 ctcacaattt gagctcgcgt gggactgcat tatgtctaat ttggaatcag ccgctcaaga
      901 aacccttgtt atcgaccgcc aaaacagtca agcaccagct acgcgcgtca ctgtaaaggc
      961 ttcttaacct gttacacgca cttgatcttc gccggttaat tcctctgcgc tataatttcc
     1021 acgtcattgg ggagtagccg ttctcgtcct cgagcagcat gcgtcaacat acttgaccat
     1081 acaggtcatg gcgtatgcgg tcagtaagcc tcatggttcc tgacttggca agacctttga
     1141 ccaaatcgcc accgacttgg ccggggggag gtttggtcat cgcgcaacgc cggcctaggt
     1201 atccgtgatg gaagcgtttt tggtgtcaac aggggtcgta gctattgccg agattggcga
     1261 taaaacacaa ctacttgccc tcattctggc ggcacgcttt aaaaaaccca tcccaattat
     1321 tttaggcatc ctggttgcaa ctgtgctcaa ccatgggctg gctggcgcgc ttggtgcttg
     1381 gttaacagcc agcgttgagg ccagctggct tcaatggggg ttaggccttt ctttcatagc
     1441 catgggattt tgggcgcttg taccggacaa gtttgatgct aaagatgccg aggtcaaagg
     1501 ccgtcttagc gtttttagcg tcacgtttgt tttgtttttt ctagcggaaa taggcgacaa
     1561 aacgcagata gccacagtcg ccctagctgc ccacttccaa agtgcgattg gcgtggtaat
     1621 cggaagcacg ctcgggatgt tga
//
LOCUS       DATBNL010000349         2009 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113591, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000349 DATBNL010000000
VERSION     DATBNL010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113591"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /gene="lpxB"
                     /locus_tag="VIC30_05960"
     CDS             <1..1121
                     /gene="lpxB"
                     /locus_tag="VIC30_05960"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEY7803962.1"
                     /translation="VVQGLKSHIPELDVAGIGGPALKSQGMQLWHPMDALSVFGYVDA
                     LKNLPRLYSIFKDVQKRLLQRPPSVFVGVDAPDFNLRLEHRLKQRGISTVHFVGPSIW
                     AWRYERIHRIRASVSHMLVLFPFELEIYEREGIPATYVGHPLADKIPMVPDQRAARSH
                     LGIDPNVRLIAILPGSRRSEIELMTPRFLGAATELQRRDPKLEFVVPMVNPARRAQFD
                     ALARNFSIKQLHVLDASEASPSVPVSWRALAACDMTMVTSGTATLEAALFKRPMVISY
                     VLSPWMRRLMAWKSGQSAPSLPWVGLPNVLSQDFVVPELLQDEATTDRLADATWQLLQ
                     DGTRCQRIVEQFASLHETLRCDTASKASQAIMNVMRSA"
     gene            1153..1746
                     /gene="rnhB"
                     /locus_tag="VIC30_05965"
     CDS             1153..1746
                     /gene="rnhB"
                     /locus_tag="VIC30_05965"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEY7803963.1"
                     /translation="MINVAYPSLLVAGVDEAGRGPLAGDVYAAAVILDERKPILGLTD
                     SKKLSARQRDALALQIREHAIAWCVALADVKEIDQLNILQATMLAMQRAVQGLAVVPD
                     QVLIDGNRVPTLPMPCTAIVKGDLTEPAISAASILAKTARDASLAELHVRYPDYGFDQ
                     HKGYGTALHLAKLREHGPCPAHRQSFAPVRRCLSEQG"
     gene            1765..>2009
                     /locus_tag="VIC30_05970"
     CDS             1765..>2009
                     /locus_tag="VIC30_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEY7803964.1"
                     /translation="MKKITSNSNTLYKSWQRLARQGGADRQSLVLEGVHLCRAWLTRF
                     GQPQWAIFRQDDEVNGEVAALVDAVPQVNQAWLHPRL"
BASE COUNT          436 a          515 c          578 g          480 t
ORIGIN      
        1 aggtcgtcca aggccttaag tcacacatcc ccgaactcga cgtggcgggt attggtgggc
       61 cggcactcaa atcgcaaggt atgcagcttt ggcatcccat ggatgcctta tcggtgttcg
      121 gttatgtgga tgcgttaaag aacctgccgc gtctctacag catctttaaa gacgtgcaaa
      181 aacgcttgtt acagcgtccg ccttcggtgt ttgtgggtgt tgatgcgcct gacttcaact
      241 tgaggttaga gcaccgcttg aaacagcgcg gcatttcgac ggtccatttt gtggggccat
      301 cgatttgggc ttggcgttat gagcggattc accggatccg ggcgtctgtg tcgcacatgc
      361 tggtgctgtt tccctttgaa ctagaaatct acgagcgtga gggtattcca gcaacctatg
      421 tcggccaccc gttagcagat aagatcccga tggtgccaga tcagcgggcg gcacgtagcc
      481 atctcggtat cgatcccaac gtcaggctca tcgcgatttt gccgggtagt cgccgatcgg
      541 agattgaact catgacaccg cgttttctag gggctgcgac cgaattgcaa cgacgtgacc
      601 caaagctcga gttcgttgtg ccaatggtca atccagcgcg ccgcgcgcaa tttgacgcgc
      661 ttgcacgaaa tttttctatc aagcaactgc acgtgctcga tgccagtgaa gcctcgcctt
      721 cggtgccggt gtcttggcga gcactggcag cctgtgacat gaccatggtc acgagcggca
      781 cggcaacgct agaggcggcg ctctttaaaa gacccatggt gatcagttac gtcctttcgc
      841 cctggatgcg tcggttgatg gcctggaagt ctggtcaatc tgcaccgtca ctaccttggg
      901 tgggcttacc caatgtactg agtcaagact ttgtggtgcc agaactgttg caagatgagg
      961 ccacaacaga caggttggct gacgcgacgt ggcaactatt gcaagacggt acaaggtgcc
     1021 aacgaattgt cgagcagttt gctagcttgc acgaaacgct gcgttgcgac acagcgtcca
     1081 aggcaagtca agccattatg aatgtgatgc gcagtgctta atgaatttac tcacagatct
     1141 gtggaacacc ccttgattaa cgttgcttat ccatctttgt tggtcgctgg cgtcgatgaa
     1201 gcgggtcgcg gaccgcttgc cggcgatgtg tatgcggccg cggtaatact tgatgaaaga
     1261 aaaccgattc tcggactgac ggactcaaaa aaactctcgg cacgtcaacg tgatgcgctg
     1321 gcactgcaaa ttcgtgaaca tgccattgct tggtgtgtgg cccttgccga tgtcaaagag
     1381 atcgatcagc tcaatattct gcaggcgacc atgctagcca tgcagcgagc agttcaaggt
     1441 ttggccgttg tgccagatca ggtgctcatt gatggcaatc gcgtgcctac attgccaatg
     1501 ccatgcacag ccattgtcaa aggcgatcta accgagcccg ccatttctgc cgcctcgatt
     1561 ctggcaaaaa ccgcgcgcga tgcctcgctg gctgaactcc acgtgcggta tccagattat
     1621 ggatttgatc agcacaaggg ttacggtacg gctttgcatc tagcgaagtt acgcgagcac
     1681 ggtccatgtc cggcgcaccg ccaatcattt gcgccggtta ggcgctgttt gagcgagcag
     1741 ggctagcatg gctagtaggc gccgatgaaa aagattactt caaacagcaa tacgctttac
     1801 aaatcatggc agcgcttagc tcgtcaaggt ggggctgatc ggcaaagcct tgttcttgaa
     1861 ggcgtgcatc tctgtcgggc atggttgaca cggtttgggc agcctcaatg ggcgattttt
     1921 aggcaggatg atgaggtcaa tggggaggtg gcagcgttag ttgatgcagt gccgcaggtc
     1981 aatcaggcgt ggctgcatcc acggctcat
//
LOCUS       DATBNL010000350         1542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113596, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000350 DATBNL010000000
VERSION     DATBNL010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113596"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1023)
                     /gene="purU"
                     /locus_tag="VIC30_05975"
     CDS             complement(154..1023)
                     /gene="purU"
                     /locus_tag="VIC30_05975"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004522850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008864 - formyltetrahydrofolate
                     deformylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HEY7803965.1"
                     /translation="MTPATNDYILTLSCPDRMGIVHRVSGLLLSHEGNIIDAQQFGDE
                     QTGRFFLRVHFALTTHASDSAIDNVRSDMATTAEAFDMQWQIHGAKDKARLLILVSKQ
                     GHCLNDLLFRVHSGQLNAEIAAVVSNHRDFEPLVRSHGVAFHHLPVTAETKSEQEAQI
                     LGLVEQLNIDLVVLARYMQILSGDLCRALAGRAINIHHSFLPSFKGAKPYSQAHARGV
                     KIIGATAHYVTPDLDEGPIIEQDIERVDHAMSVRDLTRVGSDVESLVLARAVKGHIEH
                     RILLNDSRTVVFR"
     gene            complement(1020..>1542)
                     /locus_tag="VIC30_05980"
     CDS             complement(1020..>1542)
                     /locus_tag="VIC30_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7803966.1"
                     /translation="NAAGLQAPALAHRIDGLDASHIPASYLCKGSYFNLQGKAPFDHL
                     IYPVPQRAGLGVHLTLDLGGQAKFGPDTQWVDREDYDIDPKRCEDFYEAVRRYWPDLK
                     DGTLQPGYTGIRPKISGPDEPAADFCLSGPSEHGLTGLVNLFGIESPGLTASMAIGLE
                     VKRILLNEPTPDS"
BASE COUNT          367 a          396 c          418 g          361 t
ORIGIN      
        1 gtcttgcatg gcggtcctaa tcattgtttt aaagccatcg gtctttagct acccgtgcac
       61 ataggataag cgtaatcgat gctcgtgact agctagccat cacactaagt aacgacctgc
      121 ggtcttcaat gcgtaggttg atttctttgc tgactaacgg aaaaccacgg tgcggctgtc
      181 gttgagcaaa atgcgatgct caatatggcc tttgacggcg cgtgccaata cgagggactc
      241 aacatcactg ccaacacggg ttaagtctct tacgctcatc gcgtgatcaa cacgttcgat
      301 gtcttgctca atgattgggc cctcatcgag gtctggcgtt acataatggg cagtagcacc
      361 gataattttg acgccgcgag catgcgcttg ggaatacggt tttgcgcctt tgaaacttgg
      421 caagaaactg tgatgaatgt tgatagcacg cccggccaag gcccggcaaa gatcgcccga
      481 gaggatttgc atgtaacgcg ccaacaccac cagatcgata ttgagttgct caacaagtcc
      541 gaggatctgt gcttcttgtt cgcttttcgt ctcggccgta actggcaagt gatgaaacgc
      601 cacaccatgt gagcgcacca acggttcaaa gtcccgatgg ttcgacacca cagcagcaat
      661 ctcggcattg agttgaccac tgtgcacgcg aaacagcagg tcgtttaaac aatgcccttg
      721 tttgctgaca aggatcagca atcgggcctt gtctttagcg ccatggattt gccattgcat
      781 gtcaaacgct tcggccgtgg tggccatgtc gcttcgaaca ttatcaatgg cactgtcgct
      841 ggcatgggtg gtcaaggcga agtgcacgcg aagaaaaaaa cgacctgttt gctcatcgcc
      901 aaactgctgt gcatcaataa tgttgccctc gtgggacaac aataacccac tcacgcggtg
      961 aacaatgccc atgcggtcgg ggcaagacag cgtcagaatg taatcgtttg tagcaggggt
     1021 catgaatcag gtgtgggttc gttaagtaag atgcgtttta cttcaagacc aatggccatg
     1081 gaagccgtca acccgggtga ttctatgcca aaaaggttaa ccagacctgt caggccgtgc
     1141 tcactaggcc ccgataaaca aaaatcggcc gctggttcat cgggcccgga aatctttggg
     1201 cgaataccgg tataacccgg ttgcagtgtg ccgtctttca gatcaggcca gtagcgtctt
     1261 acggcctcgt aaaagtcctc acaacgcttg ggatcaatgt cgtagtcttc acgatcaacc
     1321 cattgtgtgt cggggccaaa cttggcctgg ccgcctaggt caagggtcag atgaaccccg
     1381 agcccagcgc gctgcggcac agggtagatc aggtggtcaa acggcgcttt gccctgcagg
     1441 ttgaagtaac tccctttgca gaggtatgag gctgggatgt gcgacgcgtc aagtccgtca
     1501 atgcggtgtg ccagagcagg tgcttgcaag ccagcggcgt ta
//
LOCUS       DATBNL010000351         4974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_63981, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000351 DATBNL010000000
VERSION     DATBNL010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4974
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63981"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..719
                     /locus_tag="VIC30_05985"
     CDS             <1..719
                     /locus_tag="VIC30_05985"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7803967.1"
                     /translation="QYAARMAVVVAGLLLLTDENFSFDRRAFMSRVAHAATTSGQQVS
                     MIASIIICASIIIGVLGMTGLGVKITSVILSGSGGLLWPAILLTALTCLLLGMEVPTT
                     AAYVICVSVAGPALTELGLGLLQTHLFVFWFALLSTITPPVCGAVFIAAGMVEENWLK
                     VAVKAMALGIGLYLIPLGMISTPDLISLASDPLGALLAMTKVGVATSLVAFGLIVPGG
                     RLKRLGLMSAGALLLFIPLD"
     gene            complement(711..1055)
                     /locus_tag="VIC30_05990"
     CDS             complement(711..1055)
                     /locus_tag="VIC30_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7803968.1"
                     /translation="MLNDKTNRDKVQIAYICYILGLLVFLPAIFGAVLAYFVREELDE
                     SDWLRSHCDWLVMTFVFGLAGLLMAMMASIGLLGSIMYVACGVWTVYRIVRGWIKFAA
                     SEPVLPTRYVLV"
     gene            complement(1030..2187)
                     /locus_tag="VIC30_05995"
     CDS             complement(1030..2187)
                     /locus_tag="VIC30_05995"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7803969.1"
                     /translation="MFATLTSFSSLFMATLFMWLGIGLFNVFMGLRLSEDNVSEIWIG
                     ALMSAYYVGLVLGSRAGHRMIVRVGHSRAFAAAAATCSVMVLAQALVADKQVWVLFRI
                     VAGASVAVQFMVLESWLNEQIENEHRGRIFSFYLVISGVGIAIGQMAIALFPTMDLRP
                     LILVAICHAIGLIPIVWTVRLHPAPLMPAPLDFGYFIKRVPAGLGTMFVAGAITSAFF
                     SLAPVYVIGMNFSTAEVATFMSAAVVAGLIAQWPMGWLSDRIARGRLILFNGGLLMLV
                     SVMLWGWLPIPFWLLMTISAVSGVTQFTLYALAGAYANDLVPTDRRVSLSAVLLMSFG
                     AGACIGPLVAGGLMRWAGVNMLYVFFTACSVVLILTALQTRNRHVERQNQP"
     gene            complement(2339..2842)
                     /locus_tag="VIC30_06000"
     CDS             complement(2339..2842)
                     /locus_tag="VIC30_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006221236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY7803970.1"
                     /translation="MAVTVGDQVPEGTLTEFIEDESAGCALGPNDFKVSDLVKGKKIL
                     MFALPGAFTPTCSAKHVPSYLENIDAIKAKGVDEVWCVAVNDAFVMGAWGRQEGATGK
                     IRMLGDGSANWTRAMGQELDLTARNMGVRSQRYAAVIEDGVIKALEVEAPGVFEVSSA
                     QAMMKHL"
     gene            complement(3023..3481)
                     /locus_tag="VIC30_06005"
     CDS             complement(3023..3481)
                     /locus_tag="VIC30_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7803971.1"
                     /translation="MFKKVLIPTDGSALSAQAANAGISFARSVGAEVVALYVGQPFAA
                     TIGFDGMAAAYAITDEDYEKASAEQAKKFLQAVVDRAETAGVKVTSESVTNFNVADGI
                     VDSATKHECDLIFMGSHGRSGLSRLLLGSVTAKVLSLAHVAVLVYRVKED"
     gene            complement(3634..3975)
                     /locus_tag="VIC30_06010"
     CDS             complement(3634..3975)
                     /locus_tag="VIC30_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HEY7803972.1"
                     /translation="MSTPINRLTPDFAVAPQLNPEDMAAVAEAGYKSVIINRPDYEGG
                     PDQPTADAVSAAARAAGLRVEYQPVVSGAITADDVTKFAELLQTMPAPVLAYCRSGAR
                     CTSLFQSAAGK"
     gene            4091..4810
                     /locus_tag="VIC30_06015"
     CDS             4091..4810
                     /locus_tag="VIC30_06015"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HEY7803973.1"
                     /translation="MIQVRHLNPEDVCQPDLTARLRSWLDESELERLQRFVREEDQHR
                     FLVSHGLKRRMLAKHLDCDPSALKFGTTGRNKPVALEPRIGYPLHFNLSHTQGLTVMA
                     VSREPIGVDAEGLDRQTPGTNLAERYFTPAEQADIALAPEANQRFLTYWTLKEAYLKA
                     EGWGIVDRLNGFEFELSPPTQWPPARIRLRVREGIHCPTRAWQFYQWQVAPHHLVSLA
                     ACARQALETAVDIAPWTHEDW"
BASE COUNT         1278 a         1453 c         1201 g         1042 t
ORIGIN      
        1 cacagtacgc cgcacgtatg gccgttgttg ttgctggtct gttgctgctc accgatgaga
       61 acttttcttt cgatcggcgt gccttcatgt cacgcgtggc acatgccgcc acgacctctg
      121 gccaacaagt ctcgatgatc gcctccatca tcatctgtgc ctcgatcatc atcggtgtgc
      181 tggggatgac tggcttgggg gtaaagatta cctcggtcat tctttcaggc tctggtggct
      241 tactttggcc ggcgatcttg ttaaccgcct taacgtgtct gctgctgggc atggaagtac
      301 ccaccacggc agcttatgtt atttgcgtct cggttgccgg acctgcgctc actgagcttg
      361 gacttggtct attgcaaacc catctgtttg tgttctggtt tgctttgctc tcaacgatca
      421 caccaccggt gtgtggtgct gtatttattg cagctggcat ggtcgaagaa aattggctca
      481 aagtcgctgt caaagccatg gcgcttggta taggccttta cctcattccg ttaggcatga
      541 tttccacacc cgacttgatt tctttggcca gcgatccact gggtgcgttg ctggcaatga
      601 ccaaagtagg cgtggcgaca tcgctggtcg catttgggct catcgtcccg ggcggacgtc
      661 taaagcgact cggtttgatg tccgccgggg cattactgct gtttataccg ttagactaag
      721 acgtaacgcg tgggtagcac gggttcactg gcggcaaact tgatccagcc acgcacaatg
      781 cgatagacgg tccatacgcc gcacgccaca tacataatcg aacctagcag cccgattgag
      841 gccatcatgg ccattaacag gccagccaag ccaaatacaa atgtcatgac cagccaatca
      901 caatgagatc gaagccaatc actttcatca agctcttctc gcacaaaata ggctagcacc
      961 gcaccaaaga tggctggcaa aaaaactaat aggcccagta tgtagcaaat gtaggcaatc
     1021 tggactttgt cacggttggt tttgtcgttc aacatgtcgg ttcctcgttt ggagagcagt
     1081 taatatcaat acaacactgc atgcggtaaa aaacacatac agcatgttga cgcctgccca
     1141 cctcatgagg ccaccggcca ccaaaggtcc aatacaagca cccgcaccaa acgacatcaa
     1201 cagaaccgcg ctcaaactga cgcgacggtc ggttggtacc aaatcgttgg cataggcacc
     1261 tgccaaagca taaagcgtga attgcgtgac cccgctcacg gctgaaattg tcattaacaa
     1321 ccaaaacggt atcggcagcc atccccataa catgacggag acaagcatca acaggccgcc
     1381 attaaatagg attaatcggc cgcgtgcgat gcggtccgat aaccagccca taggccactg
     1441 agcaattaaa cctgccacga ccgcagccga catgaacgtt gcaacctcag ctgtgctgaa
     1501 gttcatacca atgacataca ccggcgccaa cgaaaaaaat gccgaggtaa tcgcgcctgc
     1561 tacaaacatc gtgccaaggc cagccggcac acgcttgata aagtaaccaa aatccaacgg
     1621 tgccggcatc agtggtgccg gatgcaagcg aaccgtccaa acaatgggaa tcaggccaat
     1681 ggcgtggcaa atggccacca gaatcaaggg gcgcaaatcc atcgtcggaa ataaggcaat
     1741 ggccatttgc ccaatggcaa tacccacgcc cgatatcact agatagaaag aaaaaatacg
     1801 accacgatgc tcgttttcta tttgctcgtt gagccagctc tcaagcacca taaactgcac
     1861 tgccacactc gcaccagcaa caatcctgaa aagcacccag acttgcttgt cagccaccag
     1921 tgcttgcgcc aacaccataa ccgagcaggt ggccgctgcc gcggcaaacg cgcgtgaatg
     1981 ccctacccga acaatcatgc ggtgacctgc ccgactgccc aataccagcc ccacgtaata
     2041 ggctgacatc agtgcaccaa tccagatctc gctgacgttg tcttcgctta accgcaagcc
     2101 catgaagacg ttgaacaagc cgatgccaag ccacataaac aaagtggcca taaacagcga
     2161 agaaaacgaa gtcagagtag caaacatggc atgtcacaaa cagatgtcaa agcatagctc
     2221 gccatggcag cgcctgccaa agtaaatttc caggcgtgat cacgagtgtt gcttgcacgc
     2281 caaacgcaca aggccggcat cagccggcct tgtcttacta ttttgagcct gacgctaatc
     2341 agagatgctt catcatggct tgagccgagc tgacctcaaa gacgccaggc gcttcgactt
     2401 ctagagcctt aatcacgccg tcttcgatga cagccgcata gcgttgtgag cgcacaccca
     2461 tgttgcgtgc cgtcaaatca agctcttgcc ccatggcgcg cgtccagtta gccgagccat
     2521 cacccagcat acggattttg ccggtagcac cctcttggcg accccaagcg cccatgacaa
     2581 acgcgtcatt gaccgccacg caccaaacct cgtcaacgcc tttggccttg atcgcatcga
     2641 tgttttccag atagcttggc acatgcttgg ctgagcaagt cggtgtgaaa gccccaggca
     2701 gcgcaaacat gagaattttt ttacctttca caaggtcaga aaccttgaaa tcattggggc
     2761 ctaatgcgca accggccgat tcatcctcga tgaactcggt caatgtgcct tcaggtactt
     2821 ggtctccaac ggtaacagcc atgcgttttt ctccttatga gccagatagt ggcgatgaaa
     2881 caatgtccta atcatagggc aacagcatgg cccgtgtata gcgcaacctc agtatccgca
     2941 ggaatacaga aactacccga tgggaaatat gccacaggca gtctcacaaa agtcgatacc
     3001 ttcaagcgta aatgcaggca gctcagtctt ctttgacgcg atacaccagc acagccacat
     3061 gtgccaacga cagaactttg gctgtcacac taccgagtag caaacgtgac aagccactgc
     3121 gcccgtgact gcccatgaat atcagatcac actcgtgttt ggtggcggaa tcaacaatac
     3181 catcggccac gttgaaattg gtgacagact cggacgtgac cttcacgccc gccgtctcgg
     3241 ctctatccac cacggcctgc aggaattttt tggcttgttc ggccgatgcc ttctcgtagt
     3301 cttcgtccgt gatggcatag gccgcggcca tgccatcaaa cccgatagtg gcggcaaacg
     3361 gttgacccac gtaaagcgcc acgacctcag cacccaccga tcgggcaaac gagataccag
     3421 cattggcggc ctgcgcagat agtgctgaac catcagttgg gattagaact tttttgaaca
     3481 tgataggtac tccctcaggt agtgggtagg acgggcaaaa aacgccacct actttgatgc
     3541 tagcccaaat tggcacctaa catcagcgtg atacccagca aaattgatgc atatcaactt
     3601 cgccaagcct tggattgaca accaatcaac aaatcacttg ccagccgccg attgaaacaa
     3661 cgacgtgcaa cgtgcgccag aacggcaata cgccaacacc ggcgctggca tggtctgcag
     3721 caattcggca aacttggtta cgtcgtcagc cgtaatcgca ccactgacca cgggttgata
     3781 ctcaactcgc agacctgctg cgcgcgcagc cgcgctcacg gcatcggccg ttggctgatc
     3841 aggcccaccc tcgtaatccg ggcgattaat gatgacgctt ttgtagccag cctcagccac
     3901 cgcggccata tcctcggggt taagctgtgg ggcaactgca aaatccgggg tcaaacgatt
     3961 gatgggggtc gacatatcaa gctccttgct gatggataat gctgtagctt actgaaacat
     4021 cagatttcag tcacgcgaga cctgacaatc aaccgaacat gcctcggcaa aaaaacacga
     4081 aaccagcgac atgattcaag tgcgccacct gaacccagaa gatgtatgcc agccggactt
     4141 aaccgcacga ctgcgatcct ggctagacga atcagagctc gagcgcctgc agcgctttgt
     4201 aagagaagag gatcagcacc gttttctggt gagccatggg ctaaagcgcc gcatgctggc
     4261 taagcacctc gattgcgacc ccagcgcact aaagttcggc accacaggac gcaacaaacc
     4321 ggtggcgctc gaaccccgga taggttaccc gttgcacttt aatctgtcac acacgcaggg
     4381 cttgaccgtc atggcagtca gtcgagaacc gatcggcgtc gacgctgaag gacttgatcg
     4441 ccaaactccc ggcacaaatc tcgctgagcg ttacttcaca ccagctgagc aagctgacat
     4501 tgccttggcg ccagaggcaa accaacggtt tcttacttat tggacattga aagaagccta
     4561 tttaaaggcc gagggctggg gcattgtcga ccggctcaac gggtttgagt tcgaattatc
     4621 gccaccaaca caatggccgc ccgcacgcat tcgactgcgc gtgcgtgaag gcattcactg
     4681 tcccacccga gcttggcagt tctaccaatg gcaagttgca cctcatcatc ttgtcagctt
     4741 agcggcatgc gctcgccaag ccctcgaaac agccgttgat atcgcccctt ggacgcatga
     4801 agattggtag gacccactat cactgcgcac catcataagc gcagcgaaac ccgacgtaca
     4861 cagcataaaa atcaccggcc ttgtattgca taccgtcttc agtcatcttg cttggaccgt
     4921 accaccacga gccaccggct gtgagtcgat catcgccttt gacttgatca accc
//
LOCUS       DATBNL010000352         4265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_44015, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000352 DATBNL010000000
VERSION     DATBNL010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4265
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44015"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VIC30_06020"
     CDS             <1..639
                     /locus_tag="VIC30_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY7803974.1"
                     /translation="KLIVSTDGRAADARRKYLANPVDYARGEQDYLADLPQWVKEVPM
                     VVLVNAGSASASEIVAGALQDHERATIMGNQTFGKGSVQVILPISHETAIKLTTSRYY
                     TPNGRSIQAQGIEPDIVVTDTEAGDLFTIVREADLNKHLENGDKKSKQDASDAVSADE
                     PADADNGQSLGEPKPFRFGEEGDFQLQQAINHLNGQPVDTGPSSALRSAKQD"
     gene            655..1407
                     /gene="moeB"
                     /locus_tag="VIC30_06025"
     CDS             655..1407
                     /gene="moeB"
                     /locus_tag="VIC30_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005663748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HEY7803975.1"
                     /translation="MRDEQLLRYGRHILLDDIGVEGQQRLLDSRVLVVGAGGLGSPVC
                     LYLASAGVGEIRVADDDTVELSNLQRQIMHGTEQLGQLKVDSAEVAMVRINPQTHVVG
                     LPHRLSGQALIAQVSAVDVVVDCCDNFQTRHAINLACVQTGTPLVSGAAIRFEGQICV
                     YDTREPDSPCYHCLFPEADDVTPINCATMGVFAPLVGIIGSLQAAEAIKVLAAVGKPL
                     QGRLVLFDARQATWHEVRVPRDPNCAVCAQRP"
     gene            complement(1437..2195)
                     /locus_tag="VIC30_06030"
     CDS             complement(1437..2195)
                     /locus_tag="VIC30_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEY7803976.1"
                     /translation="MTTQAPRRLPVPMVRAKRARIHTAAVRNPQKVWLFDLDNTLHDT
                     SFRIFPYISDGMTRAVMSCLGVDEPEAQHLRAKYWRRYGATMIGMVKHHGVNAQEFLL
                     RSHDFDVRPLVRAETGLHHKLGQLPGRKVLVTNAPLHYARAVLKHLGILQHFHSLWSI
                     EHLKLHGQYKPKPSVAILKHILACEGVAPHRAVLVEDTLSNLRGARAAGLKTVHVFHP
                     STPFAHQRRGRPHYVDLRVNKVSDLLLQKRLVRS"
     gene            complement(2195..3094)
                     /gene="argB"
                     /locus_tag="VIC30_06035"
     CDS             complement(2195..3094)
                     /gene="argB"
                     /locus_tag="VIC30_06035"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008248035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEY7803977.1"
                     /translation="MTTTDKTQALEPATIARVLSESLPYIRRFHGKTIVIKYGGNAMV
                     EQRLQRSFAHDVVLLKLIGMNPVVVHGGGPQINEALQRIGKQGSFIQGMRVTDHETME
                     VVEWVLGGQVQQDIVMMINEAGGKAVGLTGKDGGLIRAAKKLMANKEDPDSPLDIGFV
                     GDITKVDPSVVKALQDDQFIPVISPIGFGEDGMAYNINADVVAGKVAEVLSAEKLLMM
                     TNTPGVLDKDGNLLRELSSRTIDDMFADGTISGGMLPKIGSALDAARNGVKSVHVVDG
                     RVPHCLLLEVLTDQGVGTMISSR"
     gene            complement(3124..3615)
                     /locus_tag="VIC30_06040"
     CDS             complement(3124..3615)
                     /locus_tag="VIC30_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY7803978.1"
                     /translation="MRKVITIIAIVAMIGAGAWFMFPSKASAPAVTFQTLEGEQITMA
                     DLQGKPVLVKFWATSCVTCVQQMPDTVSYYEDYHSDGLEVIAVAMSYDPINFVEQFTK
                     SRDLPFTVATDTDGSVAKGFGDVKLTPIAFVIDRNGKIVKRFLGMYDKQDMRDTLETA
                     LAS"
     gene            complement(3649..>4265)
                     /locus_tag="VIC30_06045"
     CDS             complement(3649..>4265)
                     /locus_tag="VIC30_06045"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEY7803979.1"
                     /translation="SDKEINLKISDEVQTKFGQTARINVSSYDGVVLLTGDAFSEKIR
                     GEAAAIAADTPQVKSVINRLYVGPVSSFSQIMSDTWLSSKVKTTLLTAQGVPSGAVLV
                     TVERDDVYLQGLVTQAEADKIAEVVASISGVKEVYTLFDIMTPEQEAAFKASGQRQSG
                     LPASNPSPGTTTSPIEGGDINAPAAGAPSAQPVQAPTTPQVRPL"
BASE COUNT          921 a         1110 c         1212 g         1022 t
ORIGIN      
        1 aagctgattg tgtcgactga tgggcgcgcg gctgacgcgc gccgcaagta cttggctaat
       61 cccgtggatt atgcgcgtgg ggagcaagat tacttggccg atctacctca gtgggtcaaa
      121 gaagttccca tggtggtttt agtcaacgct ggatcagcct ccgcctctga aatcgtggct
      181 ggtgccttgc aagaccatga gcgtgccacc atcatgggca atcaaacgtt tggcaagggc
      241 tcggttcagg tgattttgcc gatttctcat gaaacggcca tcaagctgac cacgtcgcgc
      301 tactacaccc cgaatggtcg ttcgattcag gctcagggta tcgagcctga cattgtcgtc
      361 actgatactg aagccggtga tttatttacg atcgtgcgcg aagccgatct gaataaacac
      421 ctagaaaacg gcgacaaaaa gtccaagcaa gacgcctctg atgctgtgtc agccgatgag
      481 cccgctgatg cggacaacgg tcagtcattg ggtgagccca agccattcag gtttggcgaa
      541 gagggtgatt tccaattgca gcaggccatt aatcacctca atggccaacc ggtagacact
      601 ggaccgtctt cggcgttgcg ctcggccaag caagattaag tcggttttac ttgcatgcgc
      661 gatgagcaac tgcttcggta tgggcgccac attctgctcg atgacatcgg ggttgagggc
      721 cagcagcggc tactagatag tcgagtgctg gtcgtcggtg ctggtggctt gggttcaccg
      781 gtttgccttt atttggcttc ggctggtgtt ggtgaaattc gtgtagccga cgacgatacg
      841 gtcgaattga gcaatctaca acgccagatc atgcatggca ccgagcaact cggccaatta
      901 aaggtggatt cggcggaagt ggccatggtc cgtatcaatc cgcaaactca tgtggtgggc
      961 ttgccgcatc gtttgtctgg ccaggcttta atcgctcaag tcagcgcagt ggatgtggtt
     1021 gtggattgtt gtgacaactt ccagacgcgt catgctatta acttggcttg tgtgcaaacg
     1081 ggcacaccct tggtctcggg tgcggcgatt cggtttgagg gtcagatttg tgtctacgac
     1141 acccgagagc ctgacagtcc ctgttatcac tgtctttttc cagaggctga tgacgtcacg
     1201 ccgattaact gtgccacgat gggggtgttt gcgccgcttg tgggcatcat tggcagcctg
     1261 caggctgcag aggccattaa ggtgctagct gcggttggaa agcccttgca ggggcgtcta
     1321 gtgctgtttg atgcgcgtca ggcaacctgg catgaggttc gggtaccgcg agacccgaat
     1381 tgcgcggtgt gcgcgcagcg tccttgatca cagtggattc ctgaggccga gacgctctag
     1441 ctgcgcacga gccgcttttg tagaagcaag tcgctgactt tatttacccg caggtcgaca
     1501 tagtgcggtc tgccacgccg ttggtgcgca aatggtgttg acgggtgaaa cacgtgcacg
     1561 gttttaagtc cagcggcacg cgcgccacgc agattcgata aggtgtcttc cacgagtacg
     1621 gcgcgatgtg gggcaacgcc ttcacaagcc agtatgtgtt tgagaatggc aaccgacggt
     1681 ttgggcttgt attgcccgtg tagcttgagg tgctcgatag accacaagct atggaaatgt
     1741 tgcaagatgc ccagatgctt gagcacggca cgcgcgtagt gaagtggggc gttggtgact
     1801 agcactttac gcccaggcag ctgtccaagc ttgtgatgta gccccgtttc tgcacgcacc
     1861 aatggacgaa catcaaaatc gtggctgcgc agcaaaaact cctgtgcatt cacaccatgg
     1921 tgcttgacca tcccgatcat ggtggcaccg tagcggcgcc agtacttggc acgcaaatgc
     1981 tgagcttcgg gttcatcgac accgaggcaa ctcatgactg cacgtgtcat gccgtcactg
     2041 atgtaaggaa atatccgaaa cgatgtgtcg tgcaaggtgt tgtctagatc aaacaaccaa
     2101 accttctgtg ggttgcgaac cgccgcggtg tgaatgcgtg cgcgcttggc gcgcaccatg
     2161 ggtacgggca agcgacgcgg tgcctgagtg gtcattaacg tgaagaaatc atggtgccaa
     2221 caccctgatc cgttaacact tccaataaaa ggcaatgcgg cacgcggcca tcgaccacgt
     2281 gcacggactt cacgccgttg cgggccgcat cgagcgctga accaattttt gggagcatgc
     2341 ccccggaaat cgtgccatcg gcaaacatgt catcaatggt gcgcgaagac agttcacgca
     2401 gcaggttgcc gtccttatca agcacaccag gcgtgttggt catcatcaag agcttctcag
     2461 cgctgagaac ctccgctact ttgccggcca cgacgtctgc attgatgttg taggccatgc
     2521 catcctcgcc aaacccgatg ggcgaaatca cgggaatgaa ctgatcgtct tgcaaggctt
     2581 tgaccacgga agggtctact ttggtgatgt caccgacgaa cccgatatcg agcggcgaat
     2641 cagggtcctc tttgttggcc atcagttttt tagcggcgcg aattaggccg ccgtccttgc
     2701 cggtcagacc caccgcttta ccaccggctt cgttgatcat catgacgatg tcttgctgaa
     2761 cctgaccgcc gagcacccac tcaacgactt ccatggtctc gtggtcagtt acccgcatgc
     2821 cttggatgaa cgagccttgt ttgccaatac gttgcaaggc ttcgttaatt tgggggccgc
     2881 ccccatgcac caccaccggg ttcataccga tgagctttaa cagcacgaca tcgtgggcaa
     2941 agctgcgctg caggcgttgc tcgaccatgg cgttgccgcc atacttgatg acgatggttt
     3001 taccgtgaaa tcggcggata tagggcagtg actcagatag aacccgggca atggttgctg
     3061 gctctaatgc ctgtgtcttg tcagtggtgg tcatggcgtg ctcaatgtca gtgtgtgacc
     3121 attttaacta gctagcgcgg tctcgagggt gtcacgcatg tcttgtttgt cgtacatccc
     3181 caagaaacgt ttgacgattt tgccgttgcg gtcaatcaca aaggcgatcg gcgtcagttt
     3241 gacatcacca aaaccttttg caaccgagcc atcggtgtca gtagccacgg taaatggcag
     3301 gtcccggctc ttggtgaatt gctccacgaa attgatcggg tcatacgaca ttgccacggc
     3361 aatgacttca aggccatctg agtgatagtc ctcgtagtaa ctcacggtgt caggcatttg
     3421 ttgaacgcag gtcacgcaac tcgttgccca gaacttcacc agcactggct tgccctgaag
     3481 gtctgccatg gtgatttgtt cgccttcaag tgtttgaaac gttactgctg gcgcagatgc
     3541 tttagatggg aacatgaacc aggcgccagc gcctatcatg gcaacaatgg cgatgatagt
     3601 aatgacttta cgcatatcac ttacctcatg tgcggcaaaa taaataaatc aaagtggtcg
     3661 tacctgtggt gttgtgggtg cttgaacagg ctgcgcgctt ggtgcgccgg ccgccggtgc
     3721 gttgatgtcc ccgccctcta taggtgacgt tgtagtgcca gggcttgggt tgctggcagg
     3781 caaaccactt tggcgctggc ctgatgcttt gaaagccgcc tcttgctctg gggtcatgat
     3841 gtcaaagagc gtgtagacct ctttgacccc actgatgcta gccaccacct cggcaatctt
     3901 gtcggcctcg gcttgggtga ccaatccctg aaggtaaacg tcatcacgtt caacagtcac
     3961 taacaccgca ccagaaggca cgccttgcgc agttagcaag gtggttttga ctttggatga
     4021 cagccatgtg tcggacatga tttggctaaa tgaagagact ggaccaacat aaagacgatt
     4081 gatcactgac tttacctgag gggtgtccgc agcaatggca gcagcctcac cacgaatttt
     4141 ttcactgaaa gcgtcaccgg tgagcaatac cacgccatcg taagaggaaa cgtttatacg
     4201 agccgtctgc ccgaatttgg tttgcacttc gtcggagatc ttaaggttga tctccttgtc
     4261 gctga
//
LOCUS       DATBNL010000353         5201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_123800, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000353 DATBNL010000000
VERSION     DATBNL010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5201
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123800"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="VIC30_06050"
     CDS             <1..874
                     /locus_tag="VIC30_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020229761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7803980.1"
                     /translation="ASGKWMLETGTALLVVVWVRYLVHFMLVLALLGARRDWHLFQSS
                     CLRYQIMRGGTILCATMSFFTTLSYLPQAQATTMLFLAPLLILALAPWLLGESNRLSR
                     WLAAGIGFVGVMIVVRPGAGLDAVGVMFGLLTAALMALQHLLTRKVAADHPLTTIAWS
                     GLVGAVVLSTIVPAWLLTDDTLWRATAPLLSSFNGVILLSMGITGLLGHLLQIQAYRL
                     AAASLLAPFMYLQIVSASLMGWLIWGDFPDLVSWLGIALICASGAGIAYYEWRVSAST
                     SRASSAVSETKRPA"
     gene            complement(802..1521)
                     /locus_tag="VIC30_06055"
     CDS             complement(802..1521)
                     /locus_tag="VIC30_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006394723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7803981.1"
                     /translation="MMTNKAIEVDGLTKRVSDAGGELTILDDIRFSVAMGESIAITGA
                     SGSGKSTLLGLMAGLDVPSQGKVNVLGTDLFSLDEDGRAKFRATHVGFVFQSFQLLPN
                     LTALENVMLPLELAGHDALAPAKEALAEVGLDHRFNHYPSTLSGGEQQRVSLARAFIS
                     RPALLFADEPTGSLDVVTGARIIDLMFRLHQEHHTTLVLVTHDPNLAKRCQRTIEIHA
                     GRLVSETADDAREVEADTRHS"
     gene            1520..2338
                     /locus_tag="VIC30_06060"
     CDS             1520..2338
                     /locus_tag="VIC30_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006394722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEY7803982.1"
                     /translation="MNQLSHYKSFGYNNVPSFKLTFISLMGFIALWVATAMFSLANAQ
                     TENTASGAPQMDLNRPILIVGDSLSSEYGIRRQTGWVQLLRQRLGQRYDNPPEVINAS
                     ISGDTTSGGVSRLPKLLEQHQPGLVIVELGGNDALRGLSLDMTRENLTDMIERAQEAG
                     ALTILTGIQIPANYGPVYTEAFRTLYPEIADATGARLVPFLMAGLETDRNLFIEDGIH
                     PSEQAQPILLDNVWAALEPALPEAEKAADQGTDQTANKTAGETADSDTSQAAVN"
     gene            complement(2349..4298)
                     /locus_tag="VIC30_06065"
     CDS             complement(2349..4298)
                     /locus_tag="VIC30_06065"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEY7803983.1"
                     /translation="MFDFIRSHRRWMQLVLLILVVPAFAFFGIEGYVGFMSNDKELAE
                     VNGTAITQPEYDAVRRNQLEELRRGLGAQFDAEAIDTPAFRERILNDMINQRVIAEAA
                     MQGRYSVSDEQVRETIAEIPAVQENGVFSAQRYRQVLAAQGMTPADFENRVRSDLILS
                     QVLGPVGSTAAAPNKVANDLMAALTQQRTVALRRFNAEGYEGDIEVTQEEIDAWYKDN
                     QETIRLPESVDIEYIVLNEEAASQGLSVPESEIEAYYQQNQASYGQPEQRRVSHILRE
                     VAPDADQATKDAARAKAQEIADQLKADPDQFASLAAEFSQDPGSSSQGGDLGWISKDT
                     LVPEVEEAVFKLEPDTISDVIESPFGYHVATVTQVQPASIKPLDQVREDIESEVLREM
                     AAVRFADLATSLTNLVYDQRDALAPIAEQLNLPLRKAQGLARSGLLPSELFNRQTPVD
                     PSQVEILNSPRVLQVAFSPEVLQDKFNSGVIETAPGTVVALRVDQINPSAVPPLDQVE
                     SLIREQLVAEGALKLARQAGQAALSVIEDGTQAPIGFAAAEVVSRQDTRNLTPNELDA
                     AMKVPENQVPKVVGVDTSAGYSLLEIKSVSAGEAMPEANQQQFKGQLAQAWGQAEEQA
                     ALDVLRRLFNVQILPAAQTLISGQN"
     gene            4471..>5201
                     /gene="rlmJ"
                     /locus_tag="VIC30_06070"
     CDS             4471..>5201
                     /gene="rlmJ"
                     /locus_tag="VIC30_06070"
                     /inference="COORDINATES: protein motif:HMM:NF016278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEY7803984.1"
                     /translation="MFSYRHGFHAGNHADVLKHCIWLHVLDHFVAKDTGFLCVDTHAG
                     AGLYDLSGKWANTRSEYLDGIARIWDLTDTPPMVNRYLQSIRDINEGEELTIYPGSPW
                     LAMQCLRSQDRLRLFELLGAEVEVLQQNFKQQRRLSPRAVKLEMRDGFAGLKSVLPPP
                     TRRAVVLIDPAYENKQDYREVVQAIKDALLRFATGCYLIWYPRVNRLQVDQMAKQLQN
                     LPGIEWLQADLVVKQSPQDQHGLYGS"
BASE COUNT         1151 a         1428 c         1375 g         1247 t
ORIGIN      
        1 tgccagcggc aagtggatgc tcgagaccgg tacggcgttg ttggtggtcg tgtgggtgcg
       61 ttaccttgtg catttcatgc tggtattggc cttgctcggt gcacgtcgcg attggcatct
      121 gtttcaaagc agttgtctgc gctaccaaat catgcgtggt ggcaccattt tgtgtgccac
      181 catgagtttt tttacgactc tatcctactt gccccaagca caggccacca ccatgttgtt
      241 tctggcgcca ctattgattc tagcgcttgc gccttggttg ctcggtgagt ccaatcgcct
      301 gtcacgctgg ttggctgcag gcattgggtt cgtgggtgtg atgattgtgg tgcgtccagg
      361 cgccggcctt gatgccgtgg gtgtgatgtt tggcctgctc acggcggcct taatggcgtt
      421 gcagcacctg ctcacgcgaa aggtagcggc tgaccaccct ttaaccacca tcgcatggag
      481 cgggcttgtc ggtgcagtcg tactgtccac gatcgtgcca gcctggttac taactgacga
      541 caccctgtgg cgcgccacag ccccccttct gtcatccttt aacggggtga tcttgttgtc
      601 aatggggata acgggtttgc tcggtcatct cttgcagata caggcctatc ggttagctgc
      661 cgcttcgctg cttgcgccgt ttatgtatct acagatcgtg tccgccagtc taatgggttg
      721 gctgatttgg ggcgactttc cggacttggt gagctggtta ggtatcgcgc taatctgcgc
      781 cagtggcgca ggtattgcct attacgaatg gcgcgtgtca gcttcgactt cgcgcgcatc
      841 gtctgccgtc tcagagacca agcgtcccgc atgaatctca atggtacgtt gacagcgttt
      901 ggctaggttg ggatcgtgcg tgaccaacac caatgttgtg tggtgctctt gatgcagacg
      961 aaacatcaaa tcaatgatgc gtgcacctgt caccacatcg aggctgcccg tgggctcatc
     1021 ggcaaacaaa agcgctggtc gactgataaa tgcgcgtgcc agtgacacgc gctgctgttc
     1081 accaccagac agtgttgatg gatagtggtt aaaacggtga tcaagcccta cttctgccaa
     1141 cgcctctttg gccggtgcca atgcatcgtg gccagcgagc tcaagcggca acatcacgtt
     1201 ttctagggcg gttaggttgg gcaacagctg aaacgactga aacacgaacc ccacgtgggt
     1261 ggcgcggaac tttgcgcggc catcctcgtc caatgagaac agatccgtgc caagcacgtt
     1321 gactttgccc tggctaggga catctaggcc cgccatcaaa ccgagcaaag tcgacttgcc
     1381 cgaacccgaa gccccggtga ttgcgatgga ttcacccatt gccaccgaaa aacggatatc
     1441 gtcaaggatc gtcaactcac cgccagcatc agaaacccgc ttggtgagac cgtctacttc
     1501 aatcgcttta tttgtcatca tgaatcaatt gtcgcattac aagagctttg gttataacaa
     1561 tgtcccgtca ttcaaactga catttatcag cttgatgggg ttcatcgcat tgtgggtggc
     1621 cacagcgatg ttttcactgg ccaacgcaca gacagagaat acggcatcag gcgcgccaca
     1681 aatggacctt aatcggccca tcctaatcgt cggcgatagt ctgtcttctg aatacggcat
     1741 acggcgccag accggctggg tacagctatt gaggcaacgc ctaggccaac gatatgacaa
     1801 tccacctgaa gtcattaacg ccagcatcag tggcgacaca acaagcggtg gcgtttctcg
     1861 gctgcccaaa ctgctggaac aacatcaacc ggggctagtt atcgtcgagt taggtggcaa
     1921 tgacgccttg cgtggtctgt ccttagacat gacccgcgag aacttgacgg acatgattga
     1981 gcgcgctcaa gaggcaggtg cgttgaccat tctgactggc atacagattc cagccaatta
     2041 tggaccggta tacaccgagg catttcgcac gctttaccca gaaattgccg atgcaaccgg
     2101 cgcccgactc gttccatttc tgatggctgg actagaaacc gaccgtaatc tcttcatcga
     2161 agatggcatc cacccgtcag agcaagccca accgatcttg ctcgacaatg tctgggcggc
     2221 attagagccg gctctgcccg aggcagaaaa agcggcggat cagggcacag atcaaaccgc
     2281 caacaaaaca gcgggtgaaa ccgctgactc agataccagc caagcagccg ttaattaaca
     2341 aacgcaaact agttctgacc tgaaatcagt gtctgggcag caggcaaaat ttgcacattg
     2401 aaaagccggc gcaacacgtc aagtgccgcc tgctcttcag cctgtcccca ggcttgtgcc
     2461 aactgtcctt tgaattgctg ctggtttgcc tcaggcatcg cttcgccagc cgagaccgac
     2521 ttaatctcta agaggctata gccggcagat gtgtcgacgc caactacttt gggcacctgg
     2581 ttttctggga ctttcatggc ggcatcaagc tcatttggcg tcagattgcg cgtatcttga
     2641 cgcgacacga cctcggctgc cgcaaacccg atcggggcct gagtgccgtc ttcaatcaca
     2701 ctcaatgctg cctgccctgc ctgtctggcc agtttcaaag cgccctcggc gaccaactgt
     2761 tctcggatca atgactcgac ttgatccaat ggcggtactg ccgatgggtt gatctgatcg
     2821 acacgcaagg ccaccaccgt gccgggtgct gtttcaataa ccccggaatt gaacttgtct
     2881 tgcaacactt caggcgaaaa ggccacttgc aatacccgtg ggctgttcaa aatctcgact
     2941 tgactggggt cgacaggcgt ttgacggtta aagagctccg atggcagcaa cccacttcgt
     3001 gccaagcctt gagccttgcg caaaggcaaa ttgagttgct cggcaatcgg tgccagcgca
     3061 tcacgctggt catagaccag attggtcagc gaggttgcca ggtcggcaaa ccgaacggcg
     3121 gccatttcac gcaagacttc agactcgatg tcttcgcgca cctgatcaag tggtttgatg
     3181 ctggcaggtt gaacttgggt gacggtggcc acgtgatacc caaacgggct ttcaatcaca
     3241 tcggaaatcg tatctggctc aagcttaaac accgcctctt cgacttcagg caccaaggtg
     3301 tcttttgaga tccaacctaa atcaccaccc tgactcgatg agcctgggtc ttgtgagaac
     3361 tcggctgcaa ggctcgcaaa ttgatctgga tccgctttaa gttgatcggc aatctcttgg
     3421 gcttttgctc gcgcggcatc cttggtggct tgatccgcat cgggtgcgac ttcgcgcagg
     3481 atgtgactga cgcggcgttg ctcaggttgc ccgtagctag cctggttttg ttggtaatac
     3541 gcttcgatct ctgattccgg aacgctcaag ccttggcttg ctgcttcttc attgagcacg
     3601 atgtattcaa tgtcaacact ttcgggcaga cgaatggtct cttggttgtc tttgtaccaa
     3661 gcatcgatct cttcttgtgt aacttcgatg tcaccttcgt acccttcggc attaaagcga
     3721 cgcaacgcga ccgtgcgttg ttgggtcaaa gccgccatta ggtcattggc cactttgttc
     3781 ggtgcggcag cggtagaacc aacaggccca agcacctgtg acaaaatcaa atcactgcga
     3841 acccgattct caaaatccgc cggtgtcatg ccttgcgcag ctaacacttg acgatagcgc
     3901 tgagcggaaa aaacaccgtt ttcctgaacg gcaggaatct cagcgatggt ctcgcgtact
     3961 tgctcgtccg ataccgaata acgaccctgc atggccgcct cggcgatcac gcgctggttg
     4021 atcatatcgt tcagaatgcg ttcacgaaat gccggtgtgt cgatggcttc ggcatcaaac
     4081 tgcgcaccaa gtccgcgacg caattcttct agctggttgc gacgaacagc gtcgtattca
     4141 ggctgggtga tggccgtgcc attgacttca gcgagctctt tgtcgttaga catgaagccc
     4201 acgtagccct caatcccaaa aaatgcaaat gcgggaacca ccagtatcag caataccaat
     4261 tgcatccagc ggcggtgtga tcgtatgaaa tcaaacatag acgtgtctta agtgagtctc
     4321 aaggcggtaa aaggatgcgg ctgagtgtac cattggcgga tacgcgtgca cgcccgtttg
     4381 gttagcttca aacgggattg ttaagtcaag ctttgcctga atgcagtgct ttgaactgag
     4441 cacgttgaac cgaatactta agaggtcgct ttgtttagct atcgccacgg atttcatgcc
     4501 ggcaaccatg ccgatgtttt aaaacactgc atctggttgc atgtactaga ccactttgtg
     4561 gccaaagaca cggggttttt atgtgtcgac acccacgccg gtgcagggct ttatgaccta
     4621 tcaggcaaat gggccaatac ccgcagcgag tatctggacg gcattgcccg gatctgggac
     4681 ctcactgata ccccacccat ggtcaatcgt tatttgcaat ccattcgtga catcaatgag
     4741 ggtgaggaac tgaccattta tccaggctct ccatggcttg ccatgcaatg cctgcgcagc
     4801 caagatcgct tgcggttgtt tgaattactc ggcgccgaag tcgaggttct ccaacaaaac
     4861 ttcaaacaac agcgtcgctt gtcaccgcgt gccgtcaaac ttgaaatgcg cgatgggttt
     4921 gccggtctaa aatcagtctt gccgccaccc acgcggcgtg cagtcgtgct cattgatcca
     4981 gcttatgaga acaaacagga ttatcgtgaa gtggtgcaag ccatcaaaga tgccctgctg
     5041 cgttttgcga ctgggtgcta cctcatttgg tatccccgtg tgaatcgcct acaggtcgat
     5101 caaatggcca aacaactaca gaacctgccg ggcattgagt ggctgcaagc cgatctggtc
     5161 gtcaaacaat cgccacaaga ccagcacggc ttgtacggct c
//
LOCUS       DATBNL010000354         3394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_44038, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000354 DATBNL010000000
VERSION     DATBNL010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44038"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(452..1093)
                     /gene="queE"
                     /locus_tag="VIC30_06075"
     CDS             complement(452..1093)
                     /gene="queE"
                     /locus_tag="VIC30_06075"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013803907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HEY7803985.1"
                     /translation="MTYSVKEIFYTLQGEGLQAGMPAVFCRFAGCNLWSGREADRSSA
                     VCQFCDTDFVGTDGVGGGKFAHADDLAARISSLWPVADYDHRLVVLTGGEPLLQVDDA
                     LIDALHAQGFRIAVETNGTVVAPSGIDWVCVSPKAGAPLVQLTGQELKLVFPQPLLSP
                     EDLPWEQLAFDHYLLQPMDGPQAARNTQAAIAYCQANPRWRLSVQTHKVVGIA"
     gene            complement(1188..2459)
                     /locus_tag="VIC30_06080"
     CDS             complement(1188..2459)
                     /locus_tag="VIC30_06080"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEY7803986.1"
                     /translation="MSSGKVEVNAGVNQVDNHANEQAVLTRHVASTRFEAAREIGGLS
                     SDNKFARVHGHGFLVSAHADGNLVGSNSVIPTAAPATGWPAYRGGEVPAMLGELQHLA
                     QQLDYQRLNDVVPNPTDVQVAKWFGRQLSVPHLSAIALQSTPEQGVLVGMGVDVGADS
                     DAAADAQPKTRLLVWRRYRFQAAHQLPNVAPGHKCGRMHGHGFEVVLYAVSGDGLVDD
                     DAVNYSTLDAAWAQVAGQLSFQCLNDIPGLENPTSELLSSWIWQRLKSVVPTLSAVTV
                     YETASCGATFDGEHYRIWKDFSVDSAVRYRHAADVEDPRARLHGYTYTLRLHLCAPLD
                     DVMGWTVDFGDVKEVFNPVFKALDHHPLHENPELSAVSDGDTASMARWLFHKTQRMLP
                     SMVRVDLFETEGCGASVGTDLQGPSLPLVRL"
     gene            complement(2456..3232)
                     /gene="queC"
                     /locus_tag="VIC30_06085"
     CDS             complement(2456..3232)
                     /gene="queC"
                     /locus_tag="VIC30_06085"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014752198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEY7803987.1"
                     /translation="MKSPELFESNRTGADDSRRALVLFSGGQDSATCLAWALDRFAYV
                     ETVGFDYGQRHAVELECRQAFLSSIRSKFGSWGARLGEDHLLDLGLLGQISDTAMTRE
                     QEIVFEKSGLPSTFVPGRNLMFFMFAAAIAYRRGMSVLVGGMCETDYSGYPDCRDNTL
                     KALQVAVSLGLDAPMVVETPLMWLTKGQTWQLAQNLGGEDLVELVRTQTHTCYLGDRS
                     ALHDWGYGCGTCPACELRASGYEDYVKSATSSHPVGGAHP"
BASE COUNT          862 a          981 c          841 g          710 t
ORIGIN      
        1 gccatgacct cttcaactgt gagtttcccg ctaggatcaa tcaagtaagc ccgcggttca
       61 aagtcgggtc ctgtctgctc ctgagctaac gcgctgctcc caaacaaaaa aagcatgacg
      121 tacacgcaag agagccacca tacgaaaatt ggccgtatag tggcatttgg agaatttgct
      181 cgcatggata tcaattgtga aagcaatgaa tgatttgagt gaagttcaat cgggagaacc
      241 gggtaaaaca gtatagatcg actctagatg atcaacctat cgagaatgac gaaatctcga
      301 tgcaatcggc attagcactt ttctgctgtg acgaagtgaa gatatcggac cgtaaatatg
      361 attcgaatcc tacgcaggct cttgcctgtt gcatgaagtg acactgaagc gggattgaac
      421 attcacccag cgcgctgaca caactaaaac ctcaagcgat ccccaccact ttgtgtgttt
      481 gcacggacaa ccgccaacgt gggttggctt ggcaataagc aatcgccgcc tgggtgtttc
      541 tggctgcttg cggaccatcc atgggttgca gcaagtagtg atcgaacgcc agttgctccc
      601 acggcaaatc ctcggggctc aacaacggtt ggggaaatac cagctttagc tcttgccccg
      661 tgagttgaac cagtggtgca ccagccttgg ggctaacaca cacccagtca ataccagatg
      721 gtgcgacgac agtaccgttg gtttcgaccg caatacgaaa cccttgcgca tgcagggcat
      781 cgatcaatgc atcatcgact tgcaacaagg gttcaccacc cgtcagtacc accaagcgat
      841 ggtcgtaatc agccactggc cacagagatg agatacgcgc cgccaaatca tcggcatgag
      901 cgaacttgcc gccccctact ccatctgtac cgacaaaatc cgtgtcacag aactggcaaa
      961 ccgccgaact gcgatcggct tcgcgtcctg accacagatt acaaccggca aaccgacaaa
     1021 acaccgccgg catgccggcc tgcagtccct cgccttgcag cgtgtagaaa atctctttta
     1081 ccgaatacgt catcgccctt tatcctgtct caaacacaag cgcgttgttt ggcgctgttt
     1141 ggcattacgt agcactgatt ggcactgttt ggtctttgtg gccaacatca cagccgcacc
     1201 aatggcaacg aaggtccctg cagatcggta ccaactgaag caccacaccc ctcggtttca
     1261 aacagatcaa cccgaaccat cgagggcagc atgcgctggg ttttgtgaaa caaccacctt
     1321 gccatgcttg ccgtgtcacc atcgctaact gcgctcaact ctgggttctc atgcaacggg
     1381 tgatgatcca aggctttaaa cacaggattg aacacttcct ttacgtcacc gaaatccacc
     1441 gtccagccca tgacatcatc gagtggtgcg cacaggtgca gtcgcaaggt ataggtatag
     1501 ccatgtagcc gagccctggg gtcctcgaca tccgctgcat gtcgatagcg cactgcactg
     1561 tcaaccgaaa agtctttcca aatccgataa tgctcaccgt caaacgtcgc tccacatgag
     1621 gccgtctcgt agaccgtcac cgctgacagc gttggcacca ccgatttcaa gcgctgccag
     1681 atccacgatg acagcagctc gctcgtcggg ttttctagtc cggggatatc attcagacac
     1741 tggaaactga gctgccctgc cacttgcgcc caggcagcat ctagcgtgct gtagttcact
     1801 gcatcatcat caaccaaacc atcgcccgac accgcgtaca gcacaacttc aaatccatgg
     1861 ccgtgcatgc gaccacattt gtgaccgggt gcgacgttgg gcaattgatg tgctgcctga
     1921 aaccgataac gacgccagac caataaacga gtcttaggtt gagcatctgc agctgcgtcg
     1981 gaatctgcac ccacatccac acccatacca accaacaccc cctgctcagg cgtactctgc
     2041 agggcaatcg ctgacaggtg cggcacgctt aattgacgac caaaccactt cgccacttgg
     2101 acatccgtgg ggttgggcac aacatcgttt aggcgctgat agtccagctg ctgcgcaagg
     2161 tgctgcaact caccgagcat cgctggcact tcaccaccac gataggctgg ccagccggtg
     2221 gctggggctg cagtcgggat tacagaattc gagccgacca agttgccgtc agcatgcgca
     2281 gaaactaaaa atccatggcc atgcacgcga gcaaacttgt tgtctgatga caaaccacca
     2341 atctctcggg cggcttcaaa gcgcgtgctt gcgacatgac gggttaacac cgcttgctca
     2401 ttggcgtggt tgtcaacctg attaacgcca gcgttaactt caactttgcc tgaactcatg
     2461 gatgagcacc acctacagga tgcgaagatg tcgcagattt gacatagtcc tcgtagccac
     2521 tagcacgcag ttcacacgct gggcaggttc cacagccata gccccaatca tgcagcgcgg
     2581 atcgatcgcc tagatagcag gtatgggttt gggtacgcac caactctacc aagtcttcac
     2641 cgccgaggtt ttgagcgagc tgccaagtct ggcctttggt tagccacatg agcggcgttt
     2701 ccaccaccat gggtgcatca agacctaggc taacggcgac ctgcagtgct ttgagtgtgt
     2761 tgtcgcggca atcgggataa ccggagtaat ccgtttcaca catgccaccg accaacactg
     2821 acatgccacg tcggtaagca atggctgctg caaacataaa aaacatcaga ttacgacccg
     2881 gcacaaacgt cgatggtagg ccggacttct cgaagacaat ctcttgctcg cgggtcatgg
     2941 cggtgtcact gatctgaccg agcagcccca gatccagcag atgatcttcg ccgagccgcg
     3001 ccccccagga accaaacttt gaccggattg aacttaaaaa cgcctgtcgg cattccagct
     3061 ccacggcatg gcgctgacca taatcaaatc ccacggtctc gacatacgcg aagcgatcga
     3121 gtgcccatgc cagacacgtg gctgagtcct ggccaccaga aaaaaggacg agggcgcgac
     3181 gtgaatcgtc agccccagtg cggttggatt caaaaagttc aggggatttc atgactgcct
     3241 tggttaaatc gcgaggtatg cattcaaact aacaatgcat tgtatgagat gacttcgagg
     3301 caatggtggg tggggcaatg gtaaagaggc caaagctaag aacgatctgc aagccaattc
     3361 actgtccaag gcaagttgct tcaaacgaga tcgc
//
LOCUS       DATBNL010000355         2979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_93957, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000355 DATBNL010000000
VERSION     DATBNL010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93957"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            347..707
                     /gene="ssrA"
                     /locus_tag="VIC30_06090"
     tmRNA           347..707
                     /gene="ssrA"
                     /locus_tag="VIC30_06090"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            1234..1830
                     /locus_tag="VIC30_06095"
     CDS             1234..1830
                     /locus_tag="VIC30_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018714188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6088 family protein"
                     /protein_id="HEY7803988.1"
                     /translation="MSQLAETILSAAQTLPEGSLLSAKEFLHLASRAAVDQTLTRLTR
                     EGKLMRVGRGAYAAPVVSRFGVRPPSTEAVFKAIESTSGEVIVANGATEANALGLTTQ
                     VPTREVFLTSGRSRKLQLGNRAVELKHGNRWQLALGARPAGMAIRALSWLGPEQACSA
                     LKVLKTKLPSEEWAAMRSARAVLPSWMARAVSEASAHA"
     gene            1823..2851
                     /locus_tag="VIC30_06100"
     CDS             1823..2851
                     /locus_tag="VIC30_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014619239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEY7803989.1"
                     /translation="MPESWFELSLADQSEALEVAAARSGRPAHLLEKDIWVVWALSAI
                     YASPLSDALTFKGGTSLSKVYKVIDRFSEDIDLTYDIRELVPDLLRDGNPIPPSASQE
                     KKVTSAVRNRLPHWIEQNVRPVIEQALVACGQQAELSLAGNSSDKLIITYPAIKKGTG
                     YAAAAIQLEFGARATGEPHQRHHVACDIAPLIDGVAFPTAQPLVMAAERTFWEKATAA
                     HVYCLQGRLRGDRYSRHWYDLAALAKTTHFESAARDHELARQVAEHKSMFFTEKDANG
                     DKIDYFRATSGQLQLIPQGPSFGALARDYTAMLEDGLLAIDQPSFEVVMANCETIQDK
                     VNGLTLKE"
BASE COUNT          692 a          806 c          813 g          668 t
ORIGIN      
        1 gatgacaaga ccttgaacac ccgtgtggac aatgtcatcc agaggcgtcg gggtgcggga
       61 aagcccaaaa aggttcaaac cgacccttgg agcagcacca gaaagcccgc cagctctggg
      121 gctggccata tggccagccc cagagctgag agggatagaa ttatggaaac cggacatttc
      181 taacttgccc aactaccgga catttctact ttgccttgac acttctatct caattctttt
      241 gcattgaact aacctacggc tttttccaac ccaagtgcaa gagcgtaatt acctgttgta
      301 tcagagggcg caagctggtt attccgtgta aaatgtgcac atgtttgggg ccgatccgga
      361 ttcgacgggg gtcatgaaac agtgtagggc atgccgagca ccagttcgct cgtaaatcca
      421 ctggaaaacc aataaacgcc aacgacgagc gtttcgcctt agcagcttaa gctaggccgc
      481 tgcactgatt tgtctttggg tcaggtgggt aaaaccacag cagcgtcata tacaaagaat
      541 cggcctttgc tgggtcacac agtaaagggc taaagctacc tgaatcgcct tgggccggcc
      601 tgtcgactgg ctaagctctg ggttaaattt aaaataggtc gactaagcat gtagaactgc
      661 ctgcggaggg ctttcggacg ggggttcaat tccccccggc tccaccaatc tttcagggct
      721 cggatgatct ccgagccctt tttcttgccc gaaagaacga cagctagcgg ggctcacgcc
      781 cccaggcttg cggacacgcg cgtgcaaaat ggcggctttt tgtagccgag tggccccgat
      841 ttgttctcta ttctccgttt aggctgcgga tacccgcaac ccctgggtca gtaaacacaa
      901 gggtcttcag agggtgtttc gtagtcaacc atgcctagca ttgttggctt ggctatatga
      961 aatagcgttg ccaggtattt gatggatggt gggaaccctc acggcattgt ctgttttgca
     1021 cttaccgtcg aaatagttgt caatgtcaaa atctttctga taacaatctt cacgccttcg
     1081 aatgatgcgc cccatgacgg gttaccccca acgaaggcat cccaatctcg atctcaaagg
     1141 gttgtttatc cctggtcatc agaatcatat ttacgcctcg ggtttgctat ttgtcagaaa
     1201 taggtttata tttctgacaa atggagctta atcatgagcc aacttgctga aaccatcttg
     1261 tctgctgcgc aaaccctgcc cgagggcagc ctgttgtcgg ccaaggaatt tcttcatctg
     1321 gcctccagag ctgcggtgga ccagactctt acccgcctta cccgcgaagg caaactcatg
     1381 cgcgttgggc gaggtgccta cgccgcaccg gtggttagcc gttttggtgt gcgcccgccg
     1441 tcgactgaag ctgtgttcaa agccattgag tccacaagtg gtgaggtgat cgtggctaac
     1501 ggtgccactg aggccaatgc gctgggcttg acaacacaag tgccgacccg cgaggtattc
     1561 ctgacttccg ggcgttcacg caagttgcaa ctcggcaacc gcgccgttga gctcaagcat
     1621 ggcaaccgat ggcaacttgc ccttggcgct cgaccggctg gcatggcaat ccgtgcgctc
     1681 tcctggctag gacctgaaca ggcatgctcg gccctgaagg tgcttaagac caaactgcca
     1741 tcggaggaat gggctgccat gcgctctgcg cgagcagtat tgcctagttg gatggcgcgt
     1801 gcggtgagcg aggccagcgc acatgcctga gtcgtggttt gaactcagcc tagccgacca
     1861 gtccgaagcc cttgaggtgg ctgctgctcg aagcggtcgg ccagcgcatt tgctagaaaa
     1921 agacatctgg gttgtctggg ccttgtccgc aatctacgca tcaccgttga gcgacgcgtt
     1981 gacattcaaa ggcggcacgt cactgtcaaa ggtgtacaag gtcatcgacc gtttttctga
     2041 agacatcgat ctgacctacg acatacgaga attggtacct gacctattac gcgatggcaa
     2101 ccccattccg ccttcagcga gccaggagaa gaaagtcacc agtgcggtcc gaaaccgttt
     2161 gccacattgg attgagcaaa acgtccgacc cgtcatcgag caggcactgg tggcgtgtgg
     2221 acagcaagct gaactgagtc tggcaggcaa cagtagtgac aagctcatca tcacttatcc
     2281 ggcaatcaaa aaaggaaccg gctacgctgc tgctgcgata caactggaat ttggtgcacg
     2341 agccactggc gagccccacc agagacatca tgtggcctgc gacattgccc cgctcattga
     2401 tggggtggct tttccgacag cacagccctt ggtgatggcg gccgagcgta ccttctggga
     2461 gaaagcgacg gcggcacacg tctactgctt gcaagggcgt ctgcgtgggg atcgctattc
     2521 acgccattgg tatgaccttg ccgctttggc taaaacaaca cacttcgaat cggccgctcg
     2581 cgatcacgag ctagcgcgac aggtagctga acacaagtcc atgttcttta ccgagaaaga
     2641 tgcaaacggc gacaagatag actatttccg agcgacttcc ggacaactgc aactgattcc
     2701 gcaagggcca tcgtttggcg cgctagcgcg ggactacacc gccatgctcg aagacgggtt
     2761 gctggcgatt gatcaacctt ctttcgaggt cgtcatggcg aattgcgaga cgatccagga
     2821 caaggtcaat ggtctgaccc tgaaagagtg actacaagga aggaaatttg ctgatgcggc
     2881 ggttgtcgcc gagcctaagg cggccaagaa aactgaggtc aaatccgagt tgctgattcg
     2941 ggaatttgac tcaactcaac cgagttcacc ccagcacct
//
LOCUS       DATBNL010000356         3279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113608, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000356 DATBNL010000000
VERSION     DATBNL010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113608"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VIC30_06105"
     CDS             complement(<1..687)
                     /locus_tag="VIC30_06105"
                     /inference="COORDINATES: protein motif:HMM:NF019421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HEY7803990.1"
                     /translation="MNASTQGRLPIRVGELTQEETRWEFIYDPEYLGLGKNAWELDPT
                     GIRNKQRGAFTTVGPVPFPVFCDIALSGWSLDALRKRAATFLGADALKNKEPWGWWER
                     LLYAPADGFGALFVGNPSEKPDASVALHDALKTVTKAALAQPMQESSSGAMGGERPKM
                     TLYVDDNKVGSPRPVLLKFAMPSERGDSVVAEATALTLASELGMSVPPHQVEWLNDVP
                     ALSIERFDRGA"
     gene            complement(720..1049)
                     /locus_tag="VIC30_06110"
     CDS             complement(720..1049)
                     /locus_tag="VIC30_06110"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7803991.1"
                     /translation="MRRRDAATEPYEVTQFVTEVGARVRLMRLARGLTQAELAERTDM
                     SRLTLMSIEGGALSSRFVDVARLLWALDDVSLQAAMATAAQDPAFQEAARANLPRYAS
                     RRKKDST"
     gene            complement(1165..1776)
                     /locus_tag="VIC30_06115"
     CDS             complement(1165..1776)
                     /locus_tag="VIC30_06115"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEY7803992.1"
                     /translation="MATSFMGFDAITASTDDPVGMLSTCHGRVRKQCATLKTLMPHLH
                     TKGADDEAAAGAHRVMRYFDEAAVHHYADDEEDLFPRLMKALQTNTLEAAEKNDVQVL
                     LSRLRQEHASLGAGWQTVRTYLLKVRSHQLPDLAAMQPLIESFTQANEAHTALEDEQL
                     LPLAARLLKASALESLGQQMKSVGNRAKSNRCLRVYFGACSVS"
     gene            1764..1997
                     /locus_tag="VIC30_06120"
     CDS             1764..1997
                     /locus_tag="VIC30_06120"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEY7803993.1"
                     /translation="MRWPHEESSRNECVAPSDRIVIALTASAQRHAAFEANTFIMDYL
                     KSEAPFWKKEHRGQEAAWVQARESDAQASARWA"
     gene            2002..2595
                     /gene="mobA"
                     /locus_tag="VIC30_06125"
     CDS             2002..2595
                     /gene="mobA"
                     /locus_tag="VIC30_06125"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:TIGR02665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HEY7803994.1"
                     /translation="MTNMLTYTALILAGGQGQRMGGQDKGWVRWQGLPLIEHALNRVR
                     QQTVAPAEILISANRHIDEYALTGAAVVSDVRPDFAGPLAGVEAGLLYAKHDLVLVVA
                     CDMPLIPLNLFEKLHCSLQGSEIAVAEADKKLSPLTILLSRFLVKSLSAYLESGQAAV
                     KPWLKSRVMSVVEFDEPQSFVNINSQREMNERTTKRH"
     gene            2570..3277
                     /locus_tag="VIC30_06130"
     CDS             2570..3277
                     /locus_tag="VIC30_06130"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY7803995.1"
                     /translation="MSVRLSGISKAQTLAGLHQFSGLNDAARDYLATAAVLGNIKRHE
                     YLVQRNGAADSFYVVVQGRLEVSLSADGGFNKVIEIAGAGDQVGEAMMFCGGNHLIDA
                     RAITALTYIQLKKADCLHAMSLDPHFAQRLLEAMSARFVTLLADIKATNSLTARERLY
                     QFLLNEPREANLVRLSVSKGTIASMLGIAKETLSRELQRLTAEGLIRVEGARIELIDP
                     PVVEQPCPNLPRQLASQ"
BASE COUNT          731 a          852 c          906 g          790 t
ORIGIN      
        1 tgcaccgcgg tcaaagcgtt cgatgctcaa ggccggaacg tcgttgagcc actcgacttg
       61 gtgaggcggc acggacatgc ctaactcaga ggctaacgtc agcgccgttg cctcggcgac
      121 gacactgtcg cctcgctccg atggcattgc gaatttcagt agtaccgggc gtggcgaccc
      181 tactttatta tcatcaacgt agagtgtcat tttgggccgt tcgccaccca ttgctccgga
      241 ggaagattcc tgcattggct gcgctagggc ggctttcgtg accgtcttca gtgcgtcatg
      301 taacgctact gaagcatcgg gcttttcgct tgggttgcca acaaatagcg cgccgaatcc
      361 gtcggctggc gcgtacaaga gccgctccca ccaaccccat ggctccttgt tcttcaaagc
      421 gtcagcacca aggaatgtcg cagcgcgctt gcgtagggcg tccaatgacc agcccgacaa
      481 tgcgatatcg caaaacaccg gaaacggtac cggaccaacc gttgtgaacg cgccgcgttg
      541 cttgttgcgt atgcctgtgg gatctagctc ccaggcattt tttcccaacc cgaggtactc
      601 ggggtcataa atgaattccc agcgagtttc ctcttgcgtc aattcaccta ctcggatagg
      661 caaacgtcct tgtgtcgaag cgttcaaagc ccatctaaac acaggagcgc tgcggcggat
      721 catgtcgagt ccttctttcg acgagaggcg taacgcggca gattcgcacg cgcagcctct
      781 tggaaagctg ggtcttgcgc ggccgtcgcc atggctgcct gaagactaac gtcatctaag
      841 gcccaaagaa gtcgcgcgac atccacgaat ctggaggaga gggcgccacc ttcgatggac
      901 attaatgtca gccgactcat gtctgttctc tcagcaagtt cggcctgggt gaggccgcgc
      961 gcaagtcgca ttaagcgaac gcgcgcacca acctctgtca caaactgggt gacttcatag
     1021 ggttccgtgg ctgcgtctcg acgtctcatt atgtatgcaa ttatatactt taaactgttt
     1081 tatataaatt attgtataca taaaaatttg atggcctgct cagcagcctt gtttggaatc
     1141 cattcttaat gttgcatttg gcaattagga tactgaacat gcgccaaaat agactcgtaa
     1201 gcatctattg ctcttagccc gattgccgac agacttcatc tgctggccaa gcgactccag
     1261 cgcactcgcc ttgagcaggc gagcagccaa gggcaacaat tgctcgtctt ctagggcggt
     1321 gtgtgcttca ttggcttgtg taaagctctc gatgagcggt tgcattgctg ctagatcggg
     1381 caactggtgt gaacgcacct tcaagaggta tgtcctgaca gtttgccacc cagcccccag
     1441 gctggcgtgt tcctgtcgaa ggcgacttaa aagcacttgg acatcatttt tctctgcggc
     1501 ttctagtgtg tttgtttgca gcgctttcat tagcctggga aacaaatcct cttcatcgtc
     1561 agcatagtgg tgtactgccg cctcatcaaa atatcgcatc acccgatgag cgccagccgc
     1621 agcctcatca tcggcccctt tggtgtgcag gtgtggcatc agtgttttga gcgtggcgca
     1681 ttgcttgcgc acccggccgt ggcaggtaga caacataccc acggggtcat cggtgctggc
     1741 agtgattgcg tcaaacccca taaatgaggt ggccacatga agagtcctca cgtaatgaat
     1801 gtgtagcgcc gagcgatcgg attgtgatag ccttaaccgc aagtgctcag cgccatgcgg
     1861 cgtttgaagc caataccttc atcatggact atctcaaaag cgaagccccg ttctggaaaa
     1921 aagagcatcg cgggcaagag gcagcctggg ttcaggcgcg cgagtcagac gcccaagcct
     1981 cggcgcgttg ggcctgaatt aatgaccaac atgttgacct acaccgcact gattctggcc
     2041 ggcggccaag gccagcgcat gggtggacaa gacaaaggct gggtgcgctg gcaaggtttg
     2101 cctttgattg agcacgcgct taatcgggtg cgccaacaaa cggtagcgcc agctgaaatc
     2161 ctcatcagcg ctaatcgcca cattgatgag tacgctttaa cgggtgccgc agtggtgtct
     2221 gatgttaggc ccgacttcgc ggggcccctg gcgggagttg aagcggggtt gttgtatgcc
     2281 aaacacgatt tggttttggt tgtggcctgc gatatgccgc ttatcccttt gaatttattt
     2341 gaaaaacttc actgttccct gcagggcagt gagatagcgg ttgccgaagc cgataaaaag
     2401 ttaagtccat taaccatact tttgtcacgg tttttggtaa agtctctatc tgcttaccta
     2461 gagtcaggtc aagccgctgt gaagccttgg ctaaaaagcc gggtgatgag tgtggttgag
     2521 ttcgatgagc cgcagagctt tgtgaacatc aactcgcaaa gggagatgaa tgagcgtacg
     2581 actaagcggc attagcaaag cacaaacact agctgggctg catcaattta gtggtctgaa
     2641 tgacgcggcc cgtgattact tggccaccgc ggctgtactt ggcaatatta agcgtcatga
     2701 gtacttagtg cagcgcaatg gcgcggccga cagtttttat gtggtcgtac aaggacggct
     2761 tgaggtctcg ctgtcagcag acggtggttt taacaaagtc attgagattg caggtgcagg
     2821 tgatcaagtg ggcgaggcca tgatgttttg tgggggcaat catttgattg atgcgcgcgc
     2881 catcacggcg ctgacctaca tccaacttaa aaaagccgac tgcctgcatg ccatgtcgtt
     2941 agatccccac tttgcgcaac ggctgcttga agccatgtca gcgcggtttg taaccttgct
     3001 cgctgacatt aaggcgacca atagcttaac ggctcgtgag cgactgtatc aatttttgct
     3061 aaacgagccg cgtgaggcaa acttagtcag gttgtcggtc agtaagggca cgattgcgtc
     3121 catgctgggt attgctaaag aaacactgtc acgcgaactg caacgtttga cggctgaagg
     3181 gttgattcgg gttgaagggg cgcgcattga gttgatcgat ccaccggtgg ttgagcagcc
     3241 ttgccctaac ttgccacgtc aactggcctc tcagtaaca
//
LOCUS       DATBNL010000357         4793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_54181, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000357 DATBNL010000000
VERSION     DATBNL010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4793
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54181"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1313
                     /locus_tag="VIC30_06135"
     CDS             135..1313
                     /locus_tag="VIC30_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003261195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7803996.1"
                     /translation="MYAQNAEIEIYIWQDPDWPNWRYQLDELAPLLEQASRLQGFLYG
                     RLADVGFDVREQTFLCALTEDVVKSSAIEGEVLSPESVRSSIARRLGIEQASLAPVDR
                     HVEGVVDMMLDATSRADEPVSAQRLFGWHAALFPTGYSGLRPINVAHWRSDEQGSIQV
                     ISGPISAPHRPKTHQQIHYEAPPAPVLLREMKLFLDWINQTHPTKPEPALIKAAIGHL
                     WFVTLHPFDDGNGRIGRAIGDLLLARADKNKQRFYSLSAQIQAQRKGYYDILEGTQKG
                     SMDITAWIHWFLSQLVLALETAHATVDSALVKTKFWQHWAGVSLNPRQIKILNRLLDG
                     FDGFDGKLTTSRWGSMTKCSSDTALRDINQLIELGIMQHAPGGGRSTSYELTPAHTKQ
                     "
     gene            complement(1711..2811)
                     /locus_tag="VIC30_06140"
     CDS             complement(1711..2811)
                     /locus_tag="VIC30_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7803997.1"
                     /translation="MPWYSDKPFNSLPLLPPSCDLESKAVLKACITARSALAQLKQAA
                     QLIPNQTMLINTIPLLEAKDSSEIENIVTTTDKLFQHVQSEGQADPATKEALRYRSAL
                     NKGYHALKERPICTARAVEICRTLIGVDMDIRKTPGTQLINDKTGEIIYTPPEGEKTL
                     RDMLANWERFIHNEEEIDPLVRMAVAHYQFEAVHPFVDGNGRTGRVINILYLIQQGLL
                     QLPILYLSRHIIANKDDYYKLLLGVTRDQAWEPWILFMLKAVEQTSQWTTDKIAAIRE
                     LSTHTTEYVRHTLPKIYSRDLVDVIFEQPYCRIADLADKGVAHRQAASRYLKRLVEIG
                     VLDEISAGKEKLFIHPKLMRLLSRDTNNFTRY"
     gene            3292..>4793
                     /locus_tag="VIC30_06145"
     CDS             3292..>4793
                     /locus_tag="VIC30_06145"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY7803998.1"
                     /translation="MSGTVCRASHESVSASMPSVASVVSSTTSLDHGSSGSRGGFSGR
                     IGRIGSAVAVALALTGCMVGPDFKQPEVSLKEQWKQETGGEFSAAVETVRSAQINPVD
                     WWSQFGDPTLDRLLELAGSQNLSLQSAAVRVYQARAQLGISDATLLPTVAASGQAVQG
                     NDSSTTREAMINGNWELDFWGKYRRGIESSFSTYQGSIAAYYNADVSLASMVAKTYIN
                     IRNLESLIRVARTNLALQGESLRIAEARYKAGSTSLLALSQAQTRYQQTKAEIPGLIS
                     RLNRQQNAMSVLLGERPGYYEANFGGVKNELTAPAVLNVGIPADLLRRRPDVALAEYQ
                     AASQSALIGVREADLYPSFSITGMFGYLNTAVSYQGSPDLTFDGTSSSVGGAFYLPLF
                     YRGAIRDQVRVEDAVFQQAILNYQNVVLSAQSEVEDALVQIATSEKAAQDYAQAVRSA
                     RQSAKLALDLYEAGQSDYNVVIVAQQTLLSVQNDLVQTRTDALLGYADAF"
BASE COUNT         1110 a         1235 c         1269 g         1179 t
ORIGIN      
        1 tccccgactc gaaattgacc gcacgaccac agacctgcac tcttgcggtc tctttttctg
       61 aagtgcggta aataaccgcc acattcaccg catccagtgc agtgaatgtg tctttgcggt
      121 aaataaagac tataatctac gcacaaaatg cggagattga gatatacatc tggcaagatc
      181 ctgactggcc aaactggcgt tatcaactgg acgagttggc accgttgttg gagcaagcat
      241 cacgcctaca gggctttcta tacggcagac tggctgatgt tgggtttgat gtgcgcgaac
      301 agacattcct atgcgcactg actgaggacg tggttaaaag cagtgccatc gaaggcgaag
      361 tcctgtcacc tgagtcggtg cgctcgtcaa tcgctcgacg gctaggcatt gagcaggcca
      421 gtctggcacc agtcgatcga catgtggaag gtgttgtaga catgatgttg gacgcaacaa
      481 gtcgggctga tgaaccggtg agtgcgcaac gcttgttcgg ctggcatgcg gcattgtttc
      541 caacgggata ctctggtctg aggccaatca atgtggctca ctggcgctca gacgagcagg
      601 ggtcaataca ggtgatttcg ggacccatca gtgcaccgca tcgccctaag acccaccaac
      661 agatacatta tgaagcaccg cctgcgcctg ttttgttgcg cgagatgaag ctctttttgg
      721 attggatcaa tcaaacccac ccgactaagc ctgaacccgc gctgatcaag gctgcgattg
      781 gtcatctgtg gtttgtcacg ctccatcctt ttgatgatgg caatggcagg ataggtcgtg
      841 ccattggtga tttgctgttg gcgcgtgcgg ataagaacaa acaacgcttc tacagcttat
      901 cggctcagat tcaggcgcag cgcaagggct attacgacat tctcgagggc acgcaaaaag
      961 gctcaatgga tattaccgct tggattcatt ggtttttaag tcagctggtg ctcgcattag
     1021 aaacagcaca cgctaccgtt gacagtgcct tggttaaaac caaattctgg caacactggg
     1081 ctggggtgag cttaaaccca cggcaaatca agatcctgaa tcgcttgctt gatggtttcg
     1141 atggcttcga tggcaaactc acgacaagtc ggtggggctc gatgacaaag tgctcatcgg
     1201 acactgcgct gcgagacatc aatcaattaa ttgagcttgg catcatgcag cacgcgcctg
     1261 gcggtggcag aagcacgagc tatgaattga cgccggcaca caccaagcag taaggcgctg
     1321 cgtctgaggc cagtatcaaa ggccagtatc aatctgatcg aggcgccgct aaatcagtat
     1381 ttaaggctat tggctgaggg cagagcggga tgtgtcgcta tgtcgccttt ttagcgacat
     1441 gtttagacga tatgtcgctg ccagcgacat atcccaataa cgtgtcgtca aaatccactt
     1501 ttagcgacac gtaacccgca gcgctcataa caaggcattc gttgcaatcc ttttggtgga
     1561 cacccatcaa cataaccggc ataaacgtcc gacctcgtaa aagtagccac aaatgcagcc
     1621 cgagacgcag cagcctcaga cacatcccaa gccagcttaa cgattgtgat gcatgttgta
     1681 cgcatctttt gcgaacttta gtgccgtgtg tcagtaccgt gtgaaattgt tggtgtcacg
     1741 actcaacagt cgcatcagtt ttgggtgaat aaaaagcttt tctttaccag cgctgatttc
     1801 atcgagaaca ccgatttcta cgaggcgctt taagtagcgt gacgccgctt gacgatgtgc
     1861 cacgcccttg tctgccaagt ctgcaattcg gcagtagggt tgttcaaata tgacatcgac
     1921 taagtcgcgc gaatagattt ttggcagtgt gtgacgaacg tactcagtgg tgtgcgtaga
     1981 aagctcacgg atcgcagcaa tcttgtcagt tgtccactgg gatgtctgct ccacagcttt
     2041 aagcataaac agtatccaag gctcccatgc ctgatcgcga gtgacaccaa gcagaagctt
     2101 gtaatagtca tccttgttcg caatgatgtg ccggctgaga tacaaaatcg gtaattgcag
     2161 taaaccctgt tggattaagt acaaaatgtt gatcacgcga ccggtgcggc cgttgccgtc
     2221 gacaaacgga tgcactgcct caaattgata gtgtgcgaca gccatgcgaa ccaacggatc
     2281 gatctcttct tcgttgtgaa taaagcgctc ccagttggcc aacatatcgc gcaacgtttt
     2341 ttcaccttcg ggaggcgtgt aaatgatctc gcccgtttta tcgttgatca actgggtacc
     2401 cggcgttttt ctgatgtcca tatcgacacc tattagtgtt cgacagattt cgactgccct
     2461 tgccgtgcaa attggccgtt ctttcaatgc gtgatagcct ttgtttaaag ccgatcgata
     2521 gcgaagcgcc tccttcgtgg cgggatccgc ttgaccttct gattggacat gttgaaagag
     2581 cttgtccgtg gtggtcacaa tgttttcaat ttccgagctg tctttggcct ctagcagggg
     2641 aattgtattg atgagcatgg tttgattggg tatcagctgc gccgcctgct ttagttgtgc
     2701 aagtgctgac ctagcagtga tacacgcctt tagtacagcc ttggattcga gatcgcaaga
     2761 cggtggtagc aatggcaggc tattgaatgg tttgtctgag taccaaggca ttgaattgct
     2821 tcatctgttg agaaaatttg ttgatagctc caacgctatc gagccagaat caactttaca
     2881 acaaaacgtg tcgctaaaaa ggcaaaacag cgacacgtta acaagccacc cacaaaaaac
     2941 ctcggcacag caccttgcca acaccctcgg tcccggactg cgtacgccgt tgttttgctg
     3001 tctagatgat aaaacccgag gcgcgcttgg caaacgaagt gctagtgccg ggggtttggg
     3061 cgatcggctg gggtagcggt tgcggtgtcc agttgcggtc gcggtcgcag tttacgattg
     3121 cagcttaccg ttattgcaaa catttgtgat ctctgggctg ttaaaaccgc cctgtagctg
     3181 taagcttcat gacatttaac cttcaattgc cttcagtcat ctttggcatt atgaacagta
     3241 accgaattgg gctactatcc accaataact ttcccagcaa ggattttgcc catgtcaggc
     3301 actgtttgtc gtgcttcgca cgagtccgtt tcggcttcta tgccctcggt ggcctctgtc
     3361 gtctcttcga ccacatcgtt agatcatggc agcagtggct cccgcggtgg tttctctggt
     3421 cgcatcggtc gcatcggttc agccgttgct gtggcattgg ctctaaccgg ctgcatggta
     3481 ggcccggact ttaaacagcc tgaggtatcg cttaaagagc agtggaagca agaaaccggt
     3541 ggtgagttct cggcggccgt tgaaaccgtg cgcagtgcac agatcaatcc ggtggactgg
     3601 tggtcacagt ttggtgaccc cacactggat cgcctgctcg agctagcggg ctcacagaac
     3661 ctttcgctgc agtcggccgc agtgcgggtc tatcaggcgc gtgcccagtt aggtattagc
     3721 gatgcaacct tgctgcctac ggtggctgcc agcgggcaag cggtgcaggg taatgattct
     3781 tccacgaccc gcgaggcgat gatcaatggc aattgggaac tcgacttctg gggtaaatac
     3841 cgtcgtggta tcgaaagcag cttttctacg tatcaaggat cgattgcggc ctactacaac
     3901 gccgatgtgt cattggcctc gatggtcgcc aagacctaca tcaacatccg taacctagag
     3961 tccttgatac gtgtagcgcg caccaacctg gctttgcaag gcgagagttt gcgcatcgcc
     4021 gaagcacgct acaaagcagg ttccacctca ctgctggctt tgagtcaggc ccagactcgc
     4081 taccagcaaa ccaaagccga gatcccgggc ttaatctcac gcctaaaccg ccaacaaaac
     4141 gccatgagcg tgttgctagg cgagcgcccc gggtactatg aagcgaactt cggtggggtg
     4201 aagaacgagc tgaccgcgcc ggcggtgtta aacgtcggta tcccggcaga tcttttacgt
     4261 cgtcgtcccg atgtggcctt ggctgaatac caggccgcct cacagtctgc gctcattggt
     4321 gtgcgtgaag cggatctata ccccagcttt tctattacgg ggatgtttgg ctacttaaac
     4381 accgccgtgt cttatcaagg gtcaccagat ctgacgtttg acggcacgag ctcaagcgtg
     4441 ggtggtgctt tctacttgcc gttgttctac cgtggcgcca ttcgtgatca ggtacgcgtt
     4501 gaagacgccg tcttccagca agcgatcctg aactaccaga acgtggttct aagcgcccag
     4561 tccgaagtcg aggatgcgtt ggttcagatt gcaacctctg agaaagctgc tcaagactac
     4621 gcacaggccg tgcgctcagc gcgccaatca gccaagcttg cgcttgacct gtatgaggcc
     4681 ggtcaatcgg attacaacgt cgtcatcgtg gcacagcaaa ccttgctcag cgtacaaaac
     4741 gatctggtcc aaacccgcac ggatgctttg ctcggttacg ccgatgcctt taa
//
LOCUS       DATBNL010000358         8952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_84320, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000358 DATBNL010000000
VERSION     DATBNL010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 8952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8952
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84320"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /locus_tag="VIC30_06150"
     CDS             <1..550
                     /locus_tag="VIC30_06150"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY7803999.1"
                     /translation="YRKMLEESVITGEVYDDLLEQLEDRWAFLDAAPPIDVELAPEAL
                     AHKVPLLADLPDETLRKLTRKLKTRLALPRQLIQGPNKPSPSLYFVASGAVSMRLPDA
                     THIELGSGEFFGELYLLNQDAAEFEVRSLGYTKLLELTARDFKSLLAQDAALRSAIEL
                     VAQQRLRALEVGRSAMVSAQAD"
     gene            complement(531..1319)
                     /locus_tag="VIC30_06155"
     CDS             complement(531..1319)
                     /locus_tag="VIC30_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY7804000.1"
                     /translation="MTTTRLQSLLRELQQQASQTPELGSIPLLIDDVHCGQLSPRAVE
                     VFTRQKPSFLVDGQCRLATGPTFSTDLAELALGLYEQGCIPKWRDELLDVWCGNNVVG
                     AIERGAVRPLGLLTRAVHLNAWSTRGELWVARRALNKPTDPGMWDTLVGGLVGHREPD
                     DLALVRETQEEAGLSEADIVGRGPIRSIYRMQRRVNEGFQYEEVLTSDCVLADDAAPQ
                     NQDGEVMDIVCLPVADIEAMLFDGAFTLEASIVITESLLNRPAR"
     gene            1563..2714
                     /gene="coxB"
                     /locus_tag="VIC30_06160"
     CDS             1563..2714
                     /gene="coxB"
                     /locus_tag="VIC30_06160"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEY7804001.1"
                     /translation="MMKFQGLFLTCAMLVSGAATASVDMPGGPKVNQLNLTTGITEIA
                     RDVAWLHWMMLIICLVIFVGVFGVMFYSIWAHRKSKGAKPASFHENVGVEIAWTVIPF
                     LIVIGMALPATRTVVAMKDTSGADMTVKVTGYQWKWGYEYMDGPAEGVAFLSNLTTPT
                     TQINNLEPKGEFYLMEVDNPLVVPVGKKVRVVVTAGDVIHSWMVPDLGVKQDAIPGFL
                     RDTWFRAEQVGEYRGQCAELCGKDHAYMPIVVNVLSQEDYDKWAQEQQAMLSASADDP
                     NKEWTKDELFVRGEEIYAAQCVACHQAQGQGLAPAFPALDGSQLVMGPMAGHIDIMLN
                     GKPGTAMQSFAGLSDVELAGVITYARQAWGNAGSGSDPVVQPAQVRAAR"
     gene            2831..4450
                     /gene="ctaD"
                     /locus_tag="VIC30_06165"
     CDS             2831..4450
                     /gene="ctaD"
                     /locus_tag="VIC30_06165"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEY7804002.1"
                     /translation="MSSVTVDNIPGKGEDVSHGHHDDHAHGMPHGWRRWLFATNHKDI
                     GTMYLIFAFVMFLEGGVLALLLRTELFVPGIQFFQPELFNQFTTMHGLIMVFGAIMPA
                     FVGFANWMIPLQIGASDMAFARMNNFSFWLMPAAAVLLTASFFVPGGATAAGWTLYAP
                     LSLQMGPGMDLAIFAIHIMGASSIMGAINIIVTILNMRAPGMTLMKMPLFCWTWLITA
                     YLLIAVMPVLAAAVTMILTDRHFGTGFFNAAMGGDPVLYQHIFWFFGHPEVYIMILPA
                     FGIISAIVPAFARKPLFGYASMVYATASIAILSFIVWAHHMFTTGMPVTAQLYFMYAT
                     MLISIPTGVKVFNWVATMWKGSMTFETPMLFAIGFIFVFTIGGFTGLILSVAPIDIQV
                     HDTYYVVAHFHYVLVAGSLFALFAGAYYWIPKWTGRMYDEKLGKWHFWMTMISFNVTF
                     FPMHFLGLAGMPRRYADYATQFTDFHMIATIGAFWFGLSQLIFMYLVLKAYAGKGEAA
                     PAKPWEAAEGLEWTVPSPAPFHTFETPPVVK"
     gene            4495..4611
                     /locus_tag="VIC30_06170"
     CDS             4495..4611
                     /locus_tag="VIC30_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome oxidase small assembly protein"
                     /protein_id="HEY7804003.1"
                     /translation="MTPEQRRKNKRTGLIFLVFVIAVFVWVIYRQFAGGQLG"
     gene            4608..4850
                     /locus_tag="VIC30_06175"
     CDS             4608..4850
                     /locus_tag="VIC30_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012348823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2970 domain-containing protein"
                     /protein_id="HEY7804004.1"
                     /translation="MTTEQEQDGLRESSQRKLNFPQTVKAVLWAMFGVRKGAGLKDDI
                     GKLNPVYVILTGILFGVVFVGSLVLLVQWVVGSAVS"
     gene            4906..5781
                     /locus_tag="VIC30_06180"
     CDS             4906..5781
                     /locus_tag="VIC30_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013390979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEY7804005.1"
                     /translation="MSASHSGTGQEAPYYYVPPDSPHPVRASVTLLVMMVGMSLWVNQ
                     IAIGMWTTLAGMLAFFVVLWQWFGDAIREKEAGLNSQRIDVSYRWSMGWFIFSEVMFF
                     AALFGALWYTRAVTTPWLGDIDHQLMLWPDFNAVWPNLGPAGIVEQFQVMGPFWLPTI
                     NTSLLLASGVTLTISHHALRENHLGKAKFWLLATIVLGLIFVSCQAYEYYYAYTGLNL
                     RFDSGAFGSLFFMLTGFHGFHVILGAIMLAVMLGRMMKGHFTADNHFGFEGAAWYWHF
                     VDVVWLGLYIFVYWF"
     gene            complement(5937..6140)
                     /locus_tag="VIC30_06185"
     CDS             complement(5937..6140)
                     /locus_tag="VIC30_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HEY7804006.1"
                     /translation="MRIFVALVFIGIIASLGSALFYLMKDKGGTNRTVNALTVRIGLS
                     VALFLLLLLAHHMGWIKTTGFTP"
     gene            6205..7029
                     /locus_tag="VIC30_06190"
     CDS             6205..7029
                     /locus_tag="VIC30_06190"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEY7804007.1"
                     /translation="MADQRQNGEDSLSSDKRNKRRMLTAAFLLAILGALFVSLGNWQL
                     NRADERRQIAQSIEQGRQSAPIRLGPDVDTTQLKPWQSADVSGTWDPQWSVLLDNRNL
                     DGKPGYWLATPLRLDQTRAILVLRGWVARPIGQFNPFPAIEQSLDPVTLSGEVAMRVP
                     RLYEIADTQTLVFDSTAKVASNGTSSTIDLNQLAQLQNVSVDQLSNATGIQFLPIVLL
                     QTDPTDGEHLVRQWPTPSIDADTNIGYAMQWFSFAAIAFGAMGVLLWRAWRHAIIP"
     gene            7047..7664
                     /locus_tag="VIC30_06195"
     CDS             7047..7664
                     /locus_tag="VIC30_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804008.1"
                     /translation="MTTPEPKPRSIKPLLLILFVSVAPVILAFIVYYNPSLQPAGSTN
                     YGTLVEPQRPLPTNNELKLTTLDGQPFDIDELRGQWLLMAADQAACPEECAKKLFILR
                     NVHAMTGKNVKRVSRVWFITDDAPVPQKVLDAYAGTIMLRANPEQLDEFLAGHDLDSQ
                     HQGELLNPIWLVDPLGNLMMQFPEDPDPLKVRKDLGKLLHNSQIG"
     gene            7687..8745
                     /locus_tag="VIC30_06200"
     CDS             7687..8745
                     /locus_tag="VIC30_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEY7804009.1"
                     /translation="MSDSALSPVDQKRRQRYRRLVFLTWFLTLDLIMFGAFVRLTDSG
                     LGCPDWPGCYSKITPIGAMADIRAGEQVLPDGPVTVAKAWIEMIHRYVAVALGLMIIG
                     IMVMAWRWRDLIGRTPWLATMTFFAVCLQGAFGAWTVTLKLMPIIVTIHLLGGMGLLA
                     LMTWLAARERYHIPINPDNHRYKPWVAFGLILLFMQIGLGGWVSTNYAALACMDFPTC
                     NGQWIPPMNFEEGFSLVRGLGVLPNGEAISQLALVAIHWVHRNFAWVIFAYMGFLVWR
                     LRGDPGLRGPCHLIALLLVAQLFTGLTTIFFEWPLLIAVLHNGGAAGLTLATVTLLVR
                     VTGIQPAQVKRANVPQFA"
     gene            8755..>8952
                     /locus_tag="VIC30_06205"
     CDS             8755..>8952
                     /locus_tag="VIC30_06205"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005668129.1"
                     /note="converts protoheme IX and farnesyl diphosphate to
                     heme O; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HEY7804010.1"
                     /translation="MTTATAHDKSSLWRQYMVLTKPRVTQLAVFCAVIGMFLATPTIP
                     SLQTLVAGTAGIWLLAAAAFAV"
BASE COUNT         1949 a         2324 c         2391 g         2288 t
ORIGIN      
        1 ctatcggaag atgctcgagg aatcagtcat aaccggcgag gtttatgacg atctgctcga
       61 acaacttgag gaccgttggg catttttaga tgcggcgcca cccatcgatg tggaacttgc
      121 gcctgaggca ctggctcaca aagtgcccct gcttgctgat ttacccgacg agacgttacg
      181 taagctcacg cgcaaactaa aaactcgact ggcgttaccc cgtcagctga tccaagggcc
      241 caacaaacca agtccgtcac tgtatttcgt agcctcaggt gccgtgtcga tgcgcctgcc
      301 cgatgcgacg catattgaac tggggtcagg cgagttcttt ggggagttgt acctgctaaa
      361 ccaggatgct gcggagtttg aggtgcgctc gctcggttac accaagctgc tagagctgac
      421 ggctcgtgac ttcaagtctc tcttggcgca agatgcggct ctgcgcagcg ccattgagtt
      481 ggttgcccaa caacgtctac gagcgctcga agtggggcgc tcggcgatgg tcagcgcgca
      541 ggccgattaa gcaagctctc agtaataacg atgctggcct caagcgtaaa ggcaccatcg
      601 aacaacatgg cttctatgtc agcaacgggc aaacacacaa tatccatgac ttcaccgtct
      661 tggttttgtg gggcggcatc gtcggctaac acgcagtcgc tggtgagcac ttcctcgtac
      721 tggaaccctt cgttgacccg gcgctgcata cgatagatgc tgcgaatagg gccacgcccg
      781 acaatgtctg cctctgaaag cccagcttct tcttgtgttt cacgcactag cgccaaatca
      841 tccggctccc ggtgtccgac caaacccccg accaaggtgt cccacatgcc aggatctgta
      901 ggtttattca gagcgcgtcg cgcaacccaa agttcacccc tggtgctcca ggcattcaga
      961 tgaacagccc gagtcagcaa ccctagcggc cgaacagcac ctcgttcgat agcaccaacg
     1021 acgttgttgc cgcaccacac gtcgagcagc tcatcgcgcc actttgggat acacccttgt
     1081 tcatacaacc ctaacgctaa ctcagcgagg tctgtgctga atgtcgggcc agtggctagc
     1141 cgacattgcc catcaaccaa aaaactcggc ttttgccggg taaaaacctc aacagccctt
     1201 ggacttagtt ggccgcagtg aacatcgtca atcagcagag gtatcgaacc caactccggt
     1261 gtttgagagg cttgttgctg aagctcgcgc agtaaagact gcaagcgcgt tgttgtcacg
     1321 gagtcacctg attgcggtcg gttgaactaa aaaatgcacg aaataggcgc acgattgtaa
     1381 ctgcctatgt ttcacatcgc tgtgtcttgg gtataatccg tcgattattt gattatttgc
     1441 aaattcaggc tactctgaag ctagctctta ggaaacgttt gttgtacgaa aaatcgcaca
     1501 acaaacgtgc ctggttagat gggcattcag ctgtctgaga tcagctttgt ctcgaggtga
     1561 acatgatgaa gttccaggga ttgtttttaa cctgtgcaat gttagtttca ggcgcagcca
     1621 ctgcttcagt tgacatgcct ggcggcccga aagtcaacca gctcaatcta acaacgggga
     1681 ttaccgagat cgcccgcgat gtggcttggc tgcactggat gatgctgatc atctgtctgg
     1741 tgatctttgt tggcgtcttt ggcgtgatgt tctattccat ctgggcacac cgcaaatcca
     1801 aaggagcaaa acccgcgtcg tttcacgaga acgtgggtgt cgagattgct tggacagtga
     1861 tcccattctt gattgtgatt ggtatggctt tgcctgccac ccgcacggtg gtggccatga
     1921 aagacacgtc cggtgctgac atgaccgtca aagtgaccgg gtaccagtgg aagtggggtt
     1981 atgagtacat ggacggccct gccgaaggcg ttgcattcct gtccaacctg acaaccccaa
     2041 ccacccagat caacaacctc gaaccaaaag gtgagtttta cctgatggaa gtagataatc
     2101 cgctggtggt gccagtcggc aagaaagtgc gcgtagttgt gaccgctggt gacgttatcc
     2161 actcctggat ggtgcctgat ctcggggtca aacaagatgc gattcccggt ttcttgcgcg
     2221 acacctggtt tcgtgcagaa caagtgggtg agtaccgtgg tcagtgtgcc gaattgtgcg
     2281 gcaaggatca cgcctatatg ccgatcgttg tgaatgttct gtcacaggaa gattacgaca
     2341 aatgggccca ggaacaacaa gcgatgcttt ctgcctcggc tgacgacccc aacaaagaat
     2401 ggaccaaaga cgagctgttt gtccgtggcg aagagattta tgccgctcaa tgcgtcgcct
     2461 gccaccaagc gcagggtcaa gggctcgcac cggcatttcc agcgctcgac ggtagccaac
     2521 tcgtcatggg gccgatggcc ggtcacattg acatcatgct caatggcaag cctggcacgg
     2581 ccatgcagtc atttgctggc ctgagcgacg ttgaactggc cggtgttatt acttacgcac
     2641 gtcaagcttg gggcaatgct ggtagtggtt cagatcccgt ggttcaaccc gcccaagttc
     2701 gtgctgcacg ttaaaagcac cacaatagaa gccgtaaaac tatcgtattt ttaagttttt
     2761 tagctaacat aacgaaacat tgccccattt aatggggact ctaaccgccg atggcagtca
     2821 ggagagaagc atgagtagcg taaccgttga caatattcca ggtaaaggcg aagacgtctc
     2881 gcacggtcat cacgatgacc acgcgcacgg catgccccat ggctggcgcc gatggctatt
     2941 tgccacaaac cacaaagaca ttggcacgat gtatttgatt tttgcctttg tgatgttcct
     3001 tgagggtggc gtactggctt tgttgcttcg cactgagctg tttgtcccgg ggattcagtt
     3061 cttccagcct gagctgttta accagttcac aaccatgcat ggcttgatca tggtgttcgg
     3121 tgcgatcatg ccggcctttg ttggctttgc aaactggatg attcccttgc aaatcggcgc
     3181 ctcagacatg gcgtttgctc gcatgaacaa cttcagcttc tggctgatgc ccgcggctgc
     3241 cgttctctta actgcttcgt tttttgtgcc aggtggtgca actgccgcag gttggacgct
     3301 ctacgcgccg ctgtcattgc agatgggtcc aggcatggac ttggcgattt ttgcgatcca
     3361 catcatgggt gcttcgtcca tcatgggtgc gatcaacatt attgtgacca tcctgaacat
     3421 gcgcgcacct ggcatgacgc tcatgaaaat gcctttgttc tgctggacat ggttgattac
     3481 tgcttacttg ttgatcgctg tgatgcccgt gttggccgcc gctgtcacga tgattctgac
     3541 cgatcgtcac tttggcacag ggttctttaa cgctgccatg ggcggtgacc ccgtgctcta
     3601 tcagcacatc ttctggttct tcggtcaccc tgaggtttac atcatgattc tgccggcatt
     3661 tggcatcatt tctgccatcg tcccggcgtt tgcacgcaag cctctgtttg gttacgcatc
     3721 catggtttac gccacggcgt cgattgcgat tctgtcgttt atcgtttggg cgcaccacat
     3781 gttcaccaca ggtatgcctg tgacggcaca gctgtacttc atgtacgcca ccatgctgat
     3841 ctcgattccg actggcgtga aggtgtttaa ctgggtggca acgatgtgga aaggctccat
     3901 gacgtttgaa accccgatgc tgtttgccat tggctttatc ttcgtgttca ccatcggtgg
     3961 ctttaccggt ttgatcctgt cagtggcgcc aattgacatc caagtccacg atacctatta
     4021 cgtggtggcg cacttccact acgtgctggt ggcgggctcg ctgttcgcac tgtttgctgg
     4081 tgcttattac tggattccaa agtggaccgg ccgtatgtac gacgagaaac tcggtaagtg
     4141 gcacttctgg atgacgatga tttcgttcaa cgtgacattc ttcccgatgc acttcttggg
     4201 cttggccgga atgccacgtc ggtatgccga ctacgccact cagttcaccg atttccacat
     4261 gattgccacg atcggtgctt tctggtttgg cctgtcgcag ctgatcttca tgtacctcgt
     4321 gctcaaggct tacgccggca aaggcgaagc agcgccagct aagccatggg aagccgctga
     4381 aggtctggag tggactgtgc catcacccgc accattccac acattcgaga caccaccggt
     4441 ggtgaagtaa gtccatcagt cgtagattgt tttaaacatt gttagtagat ttaaatgaca
     4501 cctgaacaac gccgcaagaa caaaagaact ggtttgattt ttctcgtttt cgtgattgcg
     4561 gtgtttgttt gggtcatata tcggcagttt gcaggtggtc aactcggatg accacagagc
     4621 aggaacaaga tggtttgcgt gagtcgagtc agcgcaagct gaatttccca caaactgtca
     4681 aagcggtgct ttgggcgatg tttggtgttc gcaagggcgc tggccttaaa gatgacatcg
     4741 gcaaactgaa cccggtctat gtgattttga ctggcatttt gtttggtgtg gtattcgtag
     4801 gctcactcgt gttgttggtt cagtgggtcg taggtagtgc cgttagctaa cactgcggcg
     4861 cgttattaag caaatcagaa aaaagcagga ctcaggagaa caacaatgag tgcaagccac
     4921 tccggcacag gtcaagaggc accatactat tacgtccccc cagactcgcc acaccctgtc
     4981 agggcgagtg tgacgttgct ggtcatgatg gtcggtatgt ctctctgggt taatcaaatt
     5041 gccattggca tgtggacgac actggccgga atgctggctt tttttgtggt gttgtggcaa
     5101 tggttcggtg atgcgattcg cgagaaagag gctggtctga acagccaacg tatcgacgta
     5161 tcctaccgat ggagcatggg ttggttcatt ttctcagaag tgatgttctt tgctgctctg
     5221 tttggggcgc tttggtacac acgtgccgtg acaacaccct ggcttggcga tattgatcac
     5281 caactgatgc tgtggcctga ctttaatgcg gtgtggccaa acttgggtcc cgcaggtatc
     5341 gttgagcagt ttcaggtgat gggtcctttc tggttgccca cgatcaacac atcgctgttg
     5401 ttggcatctg gcgtcacact gacaatttcg caccacgctt tgcgtgagaa ccaccttggc
     5461 aaagccaagt tttggttgtt ggcgaccatc gtcttgggtt tgatctttgt gtcatgccaa
     5521 gcctatgagt actactacgc ctacactggc ttgaacttac gctttgattc cggtgcgttt
     5581 ggttcgctgt tctttatgtt gaccgggttc catgggttcc acgtgattct gggtgccatc
     5641 atgttggcgg tcatgctcgg gcgcatgatg aaaggtcact tcacggctga caaccacttc
     5701 ggatttgagg gcgccgcttg gtattggcac ttcgttgacg tcgtgtggct aggtctttat
     5761 atatttgtgt actggttcta agaccaccgc aacttcatta aaaagggccg gtaacggccc
     5821 tttttattca tcactgtggt tctttgcttt gatcgatcac tttagttcat tggtttgatt
     5881 cgcaagtgtg attttttctc gacatcaaac cagagccggc aggaaatcaa acaccatcag
     5941 ggtgtgaagc ctgtggtttt gatccatccc atgtgatgcg caagcaaaag cagtaaaaat
     6001 agggcgaccg ataagccaat tcgcacggtt aacgcgttaa cggtgcgatt ggtaccaccc
     6061 ttgtctttca tcaagtaaaa aagggcggaa cccaagctgg cgataatgcc gataaatacg
     6121 agtgcgacaa aaattcgcat gaaagcctcg caacataaaa cgccctgaat agggcgtgtt
     6181 tttagtgatc aataagagcg cattatggca gaccaacggc aaaacggcga ggattccctt
     6241 tcttctgata agcgtaacaa gcgtcgcatg ctcaccgctg cgttcttgtt agccattctt
     6301 ggcgccctat tcgtcagtct cggaaactgg cagttaaacc gggcagatga gcggcgccag
     6361 atcgctcaaa gcattgagca aggccggcag tctgcgccta tacgtctagg acccgatgta
     6421 gacacaacgc aacttaagcc ttggcagtct gcagatgtct caggcacatg ggacccacag
     6481 tggagcgtgt tactcgataa tcgcaacctc gatggcaagc ctggctactg gttggccact
     6541 cccctgcgtc tagatcagac gcgagcaatt ctggtgttac gcggctgggt ggcccgtccg
     6601 atcggccaat tcaacccttt cccggcgatt gagcagtcat tagatccagt gaccctcagt
     6661 ggtgaggttg ctatgcgggt accgcgactt tatgaaatcg ccgacacaca gacgcttgtg
     6721 tttgacagca ccgccaaagt cgcgtccaac ggcacgagca gcacaatcga tctgaaccag
     6781 ctggcgcaat tacagaacgt ttctgtcgat caactgtcca acgcgactgg catacaattc
     6841 ctgcctatcg tgttgttaca aaccgacccg accgatggag agcacttagt gcgtcagtgg
     6901 ccaacgccat cgatcgatgc cgacaccaac atcgggtacg cgatgcagtg gtttagcttt
     6961 gccgctattg cctttggtgc catgggcgta ttgctatggc gcgcctggcg acatgcgata
     7021 atcccctagt aatttagaga atacagatga cgactcctga gcccaaacct cgttcaatca
     7081 aaccgctttt actgatcctg tttgttagtg tggcaccagt gattctggcg tttatcgttt
     7141 attacaaccc gtcactgcag ccagccggct cgaccaatta cggcaccttg gtagaaccgc
     7201 aacggccgct accgaccaac aatgagctca aactcaccac ccttgatggc caaccgtttg
     7261 atatcgatga gctcaggggt caatggcttt tgatggcggc tgaccaggcc gcttgcccag
     7321 aggaatgcgc caaaaagttg tttattttac gcaacgtgca cgcaatgacc ggcaaaaacg
     7381 tcaaacgtgt tagtcgagtc tggtttatca cggacgatgc gcctgtgcca caaaaggtgt
     7441 tggatgctta cgcaggcacc atcatgttgc gtgcaaatcc agaacaactt gatgagtttc
     7501 tagctggcca cgaccttgac agtcagcacc agggcgaatt gctcaacccc atctggctcg
     7561 tcgatccgct gggtaacttg atgatgcagt tccctgaaga cccagaccct ctgaaagtcc
     7621 gtaaagatct gggcaaactt ttgcacaact cacaaatcgg ctagccgctc acagaatgat
     7681 caggatatga gtgactctgc gttaagtccc gtcgatcaaa aaaggcgtca gcgttatcgc
     7741 cgtttggtgt ttctaacttg gtttttgacg ctggatttga ttatgtttgg cgctttcgtg
     7801 cgtctgacgg attccggtct tggctgtcct gattggcccg ggtgctacag caaaatcaca
     7861 cccattggcg caatggctga cattcgtgcc ggcgaacagg tcttgccgga cggtccggtg
     7921 acagtggcaa aagcttggat cgagatgatt catcgctacg tcgcagtcgc gcttggactg
     7981 atgatcattg gcattatggt catggcttgg cgctggcgag acctcattgg tcgcacgcct
     8041 tggttagcta ccatgacatt ttttgcggtt tgcctacaag gcgcctttgg cgcctggaca
     8101 gtgacgttaa aactcatgcc catcattgtg acaatccacc tgctgggcgg catggggttg
     8161 ctggcattaa tgacctggtt agcggcgcga gagcgatatc acatcccgat caatcccgat
     8221 aaccaccggt ataaaccgtg ggtcgccttt ggattgatac tgttatttat gcagatcgga
     8281 ttgggcggct gggttagtac gaattatgcg gccctggcgt gtatggactt cccaacctgt
     8341 aacggtcaat ggattcctcc catgaatttt gaggaagggt tctcgctcgt gcgggggctg
     8401 ggtgtcttgc ccaatggcga agcgatttcc caactggcgc tggtggccat ccattgggta
     8461 caccgcaact ttgcatgggt gatatttgca tacatgggct ttctggtctg gcgcctgcgt
     8521 ggcgaccccg gcctacgcgg tccttgccat ctgattgccc tcttgctggt ggcacagctc
     8581 tttacggggc taactacgat tttctttgaa tggcctttgc taatcgccgt cttgcataac
     8641 ggtggcgccg cgggcctgac tttggccacg gttacgttgc ttgtaagagt cactggcata
     8701 caaccagcgc aggtaaaacg tgcgaatgtg cctcagtttg cctaaaatac tgatatgaca
     8761 actgcaaccg cacacgacaa atcatcactt tggcgccagt atatggtgct caccaagccg
     8821 cgtgtcacgc agctcgctgt gttctgtgcg gtgattggca tgttcttggc aacgccaacc
     8881 ataccttcgc tacagaccct agtcgccggc acggccggga tctggttgtt agcggcggcc
     8941 gcgtttgccg tg
//
LOCUS       DATBNL010000359         2943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_14491, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000359 DATBNL010000000
VERSION     DATBNL010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14491"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..726
                     /locus_tag="VIC30_06210"
     CDS             <1..726
                     /locus_tag="VIC30_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006578243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804011.1"
                     /translation="KGQVVALLGANGAGKSTTLKAISNILAAERGDVTKGSIEYKGDR
                     VDKLTPNALVTRGVIQVMEGRHCFAHLSIEDNLLTGAYTRKASRQEINQDLEKIYTYF
                     PRLKVRRKSQAAYTSGGEQQMCAIGRAMMAKPEMVLLDEPSMGLAPQIVEEVFEIVKD
                     LNERENVSFLLAEQNTMVALRYSTYGYILENGRVVMDGQAEQLRNNEDVKEFYLGISG
                     DGGQQRQSFKDVKSYRRRKRWLT"
     gene            760..2010
                     /locus_tag="VIC30_06215"
     CDS             760..2010
                     /locus_tag="VIC30_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012351571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7804012.1"
                     /translation="MDPREYRSSAQREQELFARLPTQIAYAKSQTPHFASLLAHVAAQ
                     SINSRDKLAELPITRKHQLVDLQKHNPPFGGLCATPAQQLLRIFQSPGPIYEPQGLQT
                     DNFRLSRALRAAGFMKGDLVSNTFSYHFTPGAWMMESAAHAVGCCVFPAGTGQTEMQA
                     RAMAQLQSTAYVGTPSFLKTIMQKADELELDISSLQKAVVSGEALTPSLQTWFSARGL
                     NVLSAYATADVGLIAYQTSGSAQSMVIDEDIIVEIVEPNGDKPVPFGEVGEVVVTVFD
                     QDYPLIRFATGDLSAFELNSQTEPSACGRTNVRIVGWLGRADQTTKIKGMFVHPSQVA
                     DIVQRHAEIAKARLVINGNIGQEQVVFHCELNDEAHARSDALTPQIEQTIRDVTKLRA
                     TVQLQRLDSLPQDNLVIEDARSYD"
     gene            complement(2039..>2943)
                     /locus_tag="VIC30_06220"
     CDS             complement(2039..>2943)
                     /locus_tag="VIC30_06220"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011809108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEY7804013.1"
                     /translation="GMRTIMSAHDSLIAGSVNTVVAGGMESMSQAPYLLQRQAPKLGH
                     QRVLDHMMYDGLEDAYDKGRSMGTFAQDCADFYEFSRQEQDAFAIESVRRAQRAHAEG
                     GFADEITDVAVASRDGVMQITQDEGPSRINTDRIPTLRPAFREDGTVTAASSSSINDG
                     AAAVVLMRASHAQALGLKPMARIVGHATHAQAPQWFTTAPITAIKRLLDRIHWTTDDV
                     DLWEINEAFAVVTMAAMRDLGIAHDKVNVHGGACALGHPIGASGARIVVTLLHALKRQ
                     GVRRGVASLCIGGGEATALAVELV"
BASE COUNT          722 a          823 c          783 g          615 t
ORIGIN      
        1 aaggggcagg tggttgcctt gctcggtgcc aacggcgctg gcaagtcaac cacgctcaaa
       61 gccatatcca atattctggc tgctgaacga ggtgatgtca ccaagggaag catcgaatac
      121 aaaggcgaca gggtggataa actgacaccc aatgccttag tcacacgcgg cgtgattcag
      181 gtaatggaag gacgtcactg ctttgcccat ttgtcgatcg aggacaactt gctcaccggg
      241 gcttataccc gcaaagcaag tcgacaagaa atcaatcaag accttgaaaa gatctatacc
      301 tatttcccgc gactgaaagt cagacgcaag tcacaggcgg cctatacctc gggcggtgaa
      361 cagcaaatgt gcgccatcgg tcgagccatg atggccaagc ccgaaatggt cttgcttgac
      421 gaaccctcca tggggttggc tccccagatc gtggaagagg tatttgaaat cgtcaaagac
      481 cttaatgaac gggaaaacgt cagtttcctg ctcgcagagc aaaacaccat ggttgctttg
      541 cgctacagca cctatggcta cattttagag aatggccggg tcgtgatgga cggtcaggct
      601 gaacagttac gcaataacga ggatgtcaaa gagttctatc taggtatctc cggcgatggc
      661 gggcagcagc gtcagtcttt taaagatgtg aagtcatatc gtcgccgcaa acgctggctg
      721 acctgacgat tcccataacc caacctggag agtagcacca tggatcccag agaataccgc
      781 agcagcgcgc aacgcgagca agagctgttt gcacgattac cgacacagat tgcctatgcc
      841 aaatcgcaaa cgccgcattt cgcgagtctg ctcgctcatg ttgccgctca atccattaac
      901 agccgtgaca agctcgcaga gttacccatc acacgcaagc accagctcgt tgacctgcag
      961 aaacataacc caccgtttgg tgggttatgt gccacgcctg cgcagcaact gctgcgcata
     1021 tttcagtcac cagggccgat ttacgaacca caaggtctgc agactgataa tttcaggctc
     1081 tcacgcgcac tccgagctgc cgggtttatg aaaggcgatt tggttagcaa cactttttca
     1141 tatcacttta cgcctggcgc ctggatgatg gagagtgccg cccatgcggt tggctgttgc
     1201 gttttccccg cgggtacggg acagacggaa atgcaagcgc gcgccatggc ccaattgcaa
     1261 tccacagcct atgtgggcac cccgtcgttt ctaaaaacca tcatgcaaaa ggccgatgaa
     1321 ctcgaactcg atatcagtag cctacaaaag gccgtggtat cgggcgaggc cttgacaccg
     1381 tccttgcaaa cttggtttag cgcgcgcggt ctgaacgtac tgtcggcgta tgccaccgcc
     1441 gatgttggac tgattgccta ccagacctcg ggctcggccc agagtatggt gattgatgaa
     1501 gatatcattg tggagatcgt ggaaccaaat ggtgacaaac ccgtgccatt tggcgaggtc
     1561 ggtgaggtag tggtaactgt ctttgatcaa gactatccat tgatacggtt tgccacgggc
     1621 gatttgtccg cgtttgagct caactctcaa accgaaccta gcgcctgcgg acgcaccaac
     1681 gtgcgcattg ttggttggct tggtcgtgct gaccaaacca ccaaaatcaa gggcatgttc
     1741 gtgcacccct cgcaagttgc cgacattgtt caaaggcacg ctgagattgc caaggctcga
     1801 ttggtgatca acggcaacat tggacaagaa caagtggtgt tccattgcga actcaacgac
     1861 gaggcacacg ccaggtcaga cgcgctgact ccacaaatag agcaaaccat ccgagatgtc
     1921 actaaactac gagccaccgt acagttgcaa cggcttgact cgttgcctca agacaacctc
     1981 gtgatcgaag atgcccgaag ctacgactag ggcggtgcct ggcaagacgc gcggattatt
     2041 agacaagctc aacagccaag gccgtcgctt cacctccacc gatgcaaagc gaggccactc
     2101 cgcgcctgac cccttgacgc ttgagcgcat gcagtaaggt gaccacgatg cgcgcgcccg
     2161 atgcgccaat gggatgaccc aaggcgcaag cacctccatg gacatttact ttgtcatgcg
     2221 ctataccaag atcacgcatt gccgccatgg tcaccaccgc aaacgcctca ttgatctccc
     2281 acaaatcgac atcgtcagtc gtccaatgga ttcgatcaag cagacgtttg attgcggtaa
     2341 tgggtgcggt ggtaaaccac tgcggggcct gggcatgagt cgcatgaccc acgatgcgcg
     2401 ccatcggttt aaggcccaaa gcctgagcgt gcgaggcacg cattaacacc acggcagccg
     2461 caccgtcgtt aatcgaggac gatgaggcag cggtcaccgt gccatcctct cgaaaggccg
     2521 gcctgagcgt cggaatgcgg tcagtgttga tccgagatgg tccttcgtct tgcgtgatct
     2581 gcataacgcc atcacggctc gccacggcaa cgtcggttat ctcatcagca aatccaccct
     2641 cggcgtgcgc acgttgcgcc cgacggacgg attcaatggc aaaggcatcc tgctcctgac
     2701 ggctaaactc atagaaatcg gcacagtctt gtgcgaaggt gcccatggaa cgacctttgt
     2761 cgtaggcatc ctctagaccg tcatacatca tgtggtctag gacgcgttga tgaccaagct
     2821 taggcgcttg gcgttgcaac aaataagggg cttgactcat gctttccatg ccaccggcca
     2881 caacagtatt gacagagcct gctatcaggc tgtcatgtgc gctcatgatg gttcgcatgc
     2941 cag
//
LOCUS       DATBNL010000360         1629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74113, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000360 DATBNL010000000
VERSION     DATBNL010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74113"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1183)
                     /locus_tag="VIC30_06225"
     CDS             complement(<1..1183)
                     /locus_tag="VIC30_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY7804014.1"
                     /translation="MTVEQLNDPQRQAVTLSEGHALVLAGAGSGKTKVLTTRIAWLIQ
                     NRLATPLSILAVTFTNKAAKEMQARVGAMLPIDTRGMWIGTFHGLCHRMLRAHSRDAG
                     LPQTFQILDTTDQLALIKRLLKANGIDDDKYPARDVQRFINRCKEQGQRSDVVEADDP
                     FSRRLVEIYALYEAQCQREGVVDFPELLLRALELLQKHEPVRQHYQQRFRHILVDEFQ
                     DTNPLQYLWLRTLGDGGASLFAVGDDDQSIYAFRGANVGNMADFERDYAQGNVIRLEQ
                     NYRSHGHILDAANALIAQNTGRLGKTLWTDAGVGEPVRLCEQPSDHTEAQWVLEEIRA
                     LHDEGIDRGEMAILYRSNAQSRVLEHALFTAGVPYRVYGGLRFFERQEVKHALAYLRL
                     VN"
     gene            complement(1180..>1629)
                     /locus_tag="VIC30_06230"
     CDS             complement(1180..>1629)
                     /locus_tag="VIC30_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006395975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7804015.1"
                     /translation="KVAPKLKLESDKGTVDQRTLQGVIAHRYEVLARYSSIMRQACQD
                     ELSKIKGKSESLVNAEAMKSAVHWLGRGDETLAPAERERIDAALSQTESLSTLVQMRR
                     ELMRLWESSSASSEQLLQDLQAWCQRAQHSGIASLQEFALRLRRYAV"
BASE COUNT          377 a          460 c          418 g          374 t
ORIGIN      
        1 tattgactag cctcaaatac gcgagcgcgt gcttgacttc ctgacgttca aagaatcgca
       61 atccgccata aacccgatat gggacacccg cggtaaacaa cgcgtgctca agcacacggg
      121 actgggcgtt actacgatac agaatcgcca tctcaccgcg atcgatgcct tcatcgtgta
      181 aagcacggat ttcctctagt acccactgcg cttccgtgtg atccgagggt tgttcacaca
      241 agcgcactgg ctcaccaaca ccggcgtcgg tccacaatgt tttaccaagt cgacccgtgt
      301 tttgtgcgat cagtgcgttg gccgcatcca gaatatggcc atgcgatcga tagttttgct
      361 ccaagcggat gacattacct tgggcgtagt cacgctcaaa atcggccatg ttgcccacat
      421 tcgcaccgcg aaacgcataa atggactgat catcatcgcc cacggcaaac aagctagcac
      481 cgccatcgcc gagcgtgcgc aaccaaagat attgcagtgg gttggtatct tggaactcat
      541 caaccagaat gtggcgaaac cgttgttggt aatgttggcg caccggttcg tgtttttgaa
      601 gcaattcaag tgcgcgcagc agtagttcag ggaaatcaac cacgccttca cgctggcatt
      661 gcgcctcata taaggcatag atttcgacta aacggcgact aaaaggatcg tccgcctcaa
      721 ccacgtcaga gcgctggcct tgctctttgc agcggttgat aaaccgctgc acatcgcgtg
      781 ccgggtattt gtcgtcgtca atgccattgg ccttaagcag gcgtttgatc aaagcgagtt
      841 gatcggtcgt gtcgaggatt tgaaacgttt gtggcagtcc agcgtcgcgg ctgtgcgcac
      901 gcaacatgcg gtgacacaaa ccatgaaacg taccaatcca catgccacgt gtatcaatag
      961 gcagcatggc acctacacgc gcttgcatct ctttggcagc tttgttggta aacgtgacgg
     1021 ccagaatgga cagcggcgtg gccagacggt tttgtatcaa ccaagcgatg cgggtcgtta
     1081 aaaccttggt tttaccgctt ccagcaccag ccaatactag ggcgtgaccc tcagagagcg
     1141 taaccgcttg tcgctgaggg tcgttaagtt gctctaccgt cataccgcgt agcggcgcag
     1201 tcgcaaagcg aactcctgta ggctggcaat gccactatgt tgggcgcgct gacaccacgc
     1261 ctgtaggtct tgcagcagct gctcgctact ggcacttgag ctttcccaca aacgcatgag
     1321 ctcgcgacgc atctgaacca gcgtagacaa tgactccgtc tgagataaag ccgcatcaat
     1381 gcgctcacgc tcggccggcg ccaaagtctc atcaccacgt ccaagccaat gcacagccga
     1441 cttcatggct tcagcattga ccagcgattc gcttttgccc ttgatctttg agagctcgtc
     1501 ctggcaagcc tgacgcatga tgcttgagta gcgcgcaagc acttcataac gatgggcaat
     1561 tacaccttga agggtgcgtt ggtctaccgt gcctttgtca gactcaagtt ttagtttcgg
     1621 cgcgacttt
//
LOCUS       DATBNL010000361         7929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_123960, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000361 DATBNL010000000
VERSION     DATBNL010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7929
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123960"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VIC30_06235"
     CDS             complement(<1..209)
                     /locus_tag="VIC30_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804016.1"
                     /translation="MIVYQSQKKQFLSDNHDRDIEDVILTNYRTATGHGVAASEIRSW
                     KESLRYMASVLTDEGVSEFLCLGPF"
     gene            complement(259..630)
                     /locus_tag="VIC30_06240"
     CDS             complement(259..630)
                     /locus_tag="VIC30_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014427097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEY7804017.1"
                     /translation="MNHSTHLIDTTELAKALDTFATERDWAQFHSPKNLVMALTGEVG
                     ELNELFQWLTEQQSIDLANNPERKQRVGEELADVLFYLVRIASVMGIDLNQAALEKLA
                     LNAKKYPADKSRGSSKKYSEL"
     gene            complement(669..1751)
                     /locus_tag="VIC30_06245"
     CDS             complement(669..1751)
                     /locus_tag="VIC30_06245"
                     /inference="COORDINATES: protein motif:HMM:NF024787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HEY7804018.1"
                     /translation="MAQFPTAHEHLAFLVKLQRLLSEGDFAATYKFALLMALADISVE
                     RGHDDVRPLDIPMRDIAEKFIDYYWQQSMPYGSGVGSDISGVVDSSGILSQNMGATAK
                     VVSDIQAFRSATHTDSIARARQLKAFGRLVTAVAQTVARQPVMYFQNIAGGRDPFVFE
                     RSVSGVQLNPGVSSHLRKFHGLIQHMARDRWVRHIKSNRRNIPILGPKDDLYAFLFET
                     NRNTLGIVSTNLSKLFNKTCFYCGSRINNTPDVDHFIPFSMYGRDIAQNFVLAHGSCN
                     RSKSDVLAAKRHVDNWLEQITRYPDDISQIALDAGVISDHQTILSVAKWSYQQGHEAG
                     AHAWVRKGEFERIGNTYKQIISTCLV"
     gene            complement(1757..2152)
                     /locus_tag="VIC30_06250"
     CDS             complement(1757..2152)
                     /locus_tag="VIC30_06250"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015867330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEY7804019.1"
                     /translation="MDSKPCPFCTLPSERIVDQNDLAMVIRDGFPVSPGHTLVIPKRH
                     VGSFFELDQDEVQSMLVLLKTAKVVIDEEFKPDSYNIGINDGAQAGQTVPHVHMHLIP
                     RYQGDVKDPRGGVRWLIPTKADYWTDRGR"
     gene            2613..3530
                     /locus_tag="VIC30_06255"
     CDS             2613..3530
                     /locus_tag="VIC30_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804020.1"
                     /translation="MNEHLSLQDARTNHWSVSIRYDGVDANDHTIDLHQLGLSLQGMA
                     RILAVSAHFVETGRYNKQFDTLSVKVVAQPVEEHRCYEVTATIVGILTSSELWSGLGT
                     ALFMSIVAYIFNRKKVEEMKHLSQALEASIGQHAKTQERMLTTIEKLAESLQPAVRQA
                     LNPIGQSVDSINLSSKDSDGCAAPAGPAFTFDRQTKELATNRKNIAITGPHQLSGVIS
                     ELDMLTGSCKISVLSDTDPLYPIDNLTADPSKRITAKIVDPVISVPNNPYAEALSNAS
                     SITFTAKAQIDDDGQLAVLYISDCDANHG"
     gene            complement(3920..4549)
                     /locus_tag="VIC30_06260"
     CDS             complement(3920..4549)
                     /locus_tag="VIC30_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY7804021.1"
                     /translation="MQNHFETPEEIQAQIYKELVRATHDRHHAWRTPVLATSTFDGMP
                     NARTVVLRKFIPTAINANSSTTDDHNGGILEIYTDRRSPKVTEVQQQPEACLVFWSAR
                     LSWQLRVKVSVSIQTEGPYVESLWQTVKQTRAAGDYLGLLAPGQRLVADSEHVEPSSE
                     SMEPDVHFAVLSAQINEMDWLELGRGQHRRARMGSLGNNTGLGWAWLQP"
     gene            4739..4912
                     /locus_tag="VIC30_06265"
     CDS             4739..4912
                     /locus_tag="VIC30_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804022.1"
                     /translation="MTRRNSPRDIQELDDLSSLDRIVTDKRLQKRASAKKSRRNRHYE
                     KQFIRNALTHRLD"
     gene            4988..6295
                     /locus_tag="VIC30_06270"
     CDS             4988..6295
                     /locus_tag="VIC30_06270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018025990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015105 - arsenite transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEY7804023.1"
                     /translation="MLALIIFLLTLVLVIWQPRGVGIGWSAMAGAGSALMLGVVDLQD
                     VLTVWHIVWDATFTFVALVVISLILERAGFFAWAALHVARWGKGHAKTLLIWVVLLGA
                     AMSALFANDGAALLLTPIVIVLLRKLGFSAATCLVFIIATGFIADTASLPLIISNLVN
                     IVSANYFDVSFARYAMVMVPVNLVAVAASLLVLLWTFRRDLPKALTYHDTKLDQPQDA
                     IEDKLVFTWAMPIMALLLVTYFVTGQYNVPTAFVTGAAALAFLALAARIWDTKARRLG
                     LVGQLLKQAPWQIVIFSVGMYVVVYGLAQAGLTDLGVRALHWLAQQGDIVATVGTGFL
                     AAVTASIMNNMPATLVGVLSIDQANLPAHTQELMMYANVIGNDLGPKLTPIGSLATLL
                     WLHVLDRNGFHVTWGQYMRIGIVITPPVLLVTLLALALWLPVV"
     gene            complement(6449..7549)
                     /locus_tag="VIC30_06275"
     CDS             complement(6449..7549)
                     /locus_tag="VIC30_06275"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY7804024.1"
                     /translation="MMSRRHFLKSSSLALPALVGSATVLSGTAQASSGSDSDDYAQKA
                     DLISQKLYADDGLAVPIPTKPTVSPLAKGLDRTLVLGGGGEYYLAWYCGFFHGLFEAG
                     LEMEKLPEMVVGTSAGAYMGSSLTSGHFSRLRKEMDFFGEFPKLFAKIAPLSNPNTSQ
                     KRAKEINMAATNGSIETRQVLGRAALAADNHLNGPGVESLAALLTGDSKTSWPAPKMH
                     TTGVDCYTGERLVVSQDTARKNGIPLAHATAASSSLPGIIGPTLIGQRYSMDGGMCST
                     PAHVDLVAGSKRALVITLTDGVTGAILTKIPHPMAQNIKDLEATGTKVKWIIAGTPPG
                     ISLTNPNEIKPAIQAGYERAKKEVDEIKQFWA"
BASE COUNT         1815 a         2156 c         2026 g         1932 t
ORIGIN      
        1 tagaaaggcc ccaaacacaa aaattctgac actccctcat cggttaagac tgaggccata
       61 taacgcaacg actctttcca cgatctgatc tcactggcag ccacgccatg accggttgcg
      121 gtgcgatagt tcgtgagaat gacatcctca atatcacgat catggttgtc agacagaaat
      181 tgcttctttt gtgactgata gacgatcatg ggtcatgctc ctgaaacaaa ctaccaccga
      241 atcaatagtc tcaccacttc acagttcgct gtatttcttg ctgctgccgc gtgacttgtc
      301 cgcggggtac ttcttagcat tcagcgccag cttttcaagc gccgcctgat tgagatcaat
      361 acccatgacc gacgctatac gcaccaggta gaacaacaca tctgccagct cctcacctac
      421 ccgttgcttt ctctcagggt tgttagctag atctatgctc tgttgctcgg tcaaccactg
      481 aaacagttcg ttgagctcac cgacttcgcc tgtcagcgcc atgacaagat tcttggggga
      541 atggaactgc gcccagtcgc gctcagtcgc gaaagtatcg agtgctttgg cgagttcggt
      601 ggtgtcgatg agatgagtgg aatgattcaa cgtgggtcct ttttctgcat tgtgtgagtt
      661 tagacacatc agaccaagca tgtactgatg atttgcttgt acgtattacc tatcctttca
      721 aactcaccct tcctcaccca cgcatgcgcg cccgcctcat gcccttgctg gtacgaccat
      781 ttggccactg acagtatggt ttgatggtca ctgatgacac ccgcatccaa ggcaatctga
      841 ctgatgtcgt ctggatagcg ggtgatctgt tctagccagt tatccacatg ccgcttggct
      901 gccagcacat cagacttgct gcggttacag ctgccgtgcg ccaatacgaa gttctgagca
      961 atgtccctgc cgtacatcga gaacgggatg aaatgatcca catccggggt gttgttgata
     1021 cgactgccgc agtagaaaca cgttttgtta aacagcttgg acaggtttgt actgacgatg
     1081 ccaagtgtgt tgcggttggt ctcgaacaag aacgcataca aatcgtcttt gggccccaga
     1141 atcgggatat tgcgcctgtt gctcttgatg tgcctgaccc atcgatccct ggccatgtgt
     1201 tgaatcaacc catggaactt acgcaagtga ctgctcaccc cgggatttaa ttgcacacca
     1261 ctgactgacc gttcaaacac aaacggatct ctgccaccag caatgttctg gaaatacatg
     1321 acaggttgcc tcgcgacagt ctgggccaca gctgtaacca gtctgccaaa ggctttcagt
     1381 tgtctggccc gggcaatgct atcggtgtgc gttgcactac gaaaagcctg tatatcggac
     1441 accaccttgg ccgtggcacc catgttctga ctgaggatgc cgctactgtc tacaacaccg
     1501 ctgatatcag acccgacacc agacccgtac ggcatcgact gctgccagta gtaatcaatg
     1561 aacttctctg caatgtctcg catcggtata tcgagcggcc tgacatcatc gtgccctcgc
     1621 tctactgaga tgtctgccaa tgccatcaga agcgcaaact tataggtcgc cgcaaaatcc
     1681 ccttcgctta gcaaccgttg cagtttgact agaaacgcaa ggtgctcgtg ggcggttggg
     1741 aattgagcca tgaccactaa cgccccctat ctgtccagta atcggccttg gtcggtatca
     1801 gccacctgac accacccctg ggatctttga catcaccctg ataccgaggg atcaaatgca
     1861 tgtgtacatg cgggacagtc tgcccggcct gcgctccgtc gttgataccg atgttgtagc
     1921 tatccggttt gaattcctca tcgatgacaa ctttggcggt tttaagcagg accagcatcg
     1981 actggacttc gtcttggtca agctcaaaga aagagccaac atggcgttta ggaatcacca
     2041 gcgtatgacc cggcgacact ggaaacccgt cacggatcac catcgccaag tcgttttgat
     2101 cgacgatgcg ctcagacggc aaggtgcaga acggacaggg tttggaatcc atggtgactt
     2161 ttacagtgcg aggtgtctca tgtcctgaga cacatgctca gcagacttgc acaaccaaaa
     2221 tacgagctga cttcgtaact aaggcttagt tagagtctac cggattcagt gatcaatgca
     2281 cagtgatgct ggcatgatcg ttgctgttga tgatttcgat tggtgctttc agttaacggc
     2341 gcttgtccat gagcgtgata aaccgacctg ctagttcgca catcgaagtt ctagatcaac
     2401 acccgcgaag ggctcttttg cagctctacg gtttgctgac agacgggcac ttgacccatc
     2461 agatcagtcg ggcgagtttg cacatgcacg gggaaaacag cacaagttcg aaggcatagt
     2521 ccacaccctt gttggcttga tacatcgctt gcgttacgcg atcgcccgcc cgccatcaca
     2581 actacctctc atacttcctg attgaactag ctatgaacga acatttatcg ttgcaagatg
     2641 ccaggacaaa ccactggtct gtttccattc gatacgacgg cgtagatgcc aacgatcaca
     2701 ccatcgattt gcatcagctt ggactgtcgc ttcaaggcat ggctaggatt ctggccgtta
     2761 gtgcccactt cgttgaaaca gggcggtaca acaaacagtt cgacaccttg tcagtcaaag
     2821 ttgttgcaca accagtcgaa gagcaccgtt gctacgaggt cactgctaca atcgttggca
     2881 tactgacaag cagtgagctt tggtctggcc tcggtaccgc tctattcatg tccatcgtgg
     2941 cctacatctt taatcgcaaa aaggtcgagg aaatgaagca cctgagccaa gccctagaag
     3001 catctattgg ccagcatgcg aagacacaag aacgcatgct tacgaccatc gaaaaactcg
     3061 cagaatcgct gcaaccggct gtgcgtcagg cactcaaccc catcggtcaa tctgtagact
     3121 cgattaacct cagctcaaaa gattcggacg gttgcgctgc cccggcaggt cctgcgttta
     3181 cctttgatcg tcaaacgaaa gaacttgcca caaaccgtaa aaacatcgcc atcactggcc
     3241 cacaccaact atctggcgtc atttctgaat tggatatgct cactggatct tgcaaaatct
     3301 cagttctaag cgacaccgat ccgctctatc ccattgacaa cttgactgct gaccccagta
     3361 aacgcatcac agccaagatc gtggacccgg tgatcagtgt tccaaacaat ccatatgcag
     3421 aggcactgtc caatgcatcg agcatcacat tcaccgcaaa agcccaaatc gatgacgatg
     3481 gtcaattggc agtgctttac atcagtgact gcgacgcaaa tcatggctga ttggagcagt
     3541 ctcttgcggg ggatattagc tggtcttgct tggcctgcct cctcgactgg tgcaccgaca
     3601 tatcctaagc taagagggac cgacatatcg cgtatgcgtc aggatgttat tcgcgtcggc
     3661 aatgacttta attcagtgat tcatcaagaa cctgtcaagc gcgaggctgt acgcgtacga
     3721 ggccacccat aaagccgagc tcgatcctga aggcaacgtc gtcatgctct acatcaacga
     3781 ttgtcaaaag caaaactgct ctgctcactg atctgctcaa tgatccggca aggcgcaggt
     3841 ttagttatgt gtagcagcct gacagaaaat actcatcacc atcagtgctt taagtgcctc
     3901 tcatatcaga gacacgccat taaggctgca accacgccca tcccaatcca gtgttattac
     3961 ccaagctacc catgcgtgcg cgccgatgtt gaccgcgccc gagctcaagc caatccatct
     4021 cgttgatctg ggcacttagc accgcgaaat gaacgtcggg ctccatggac tctgacgaag
     4081 gttccacatg ctcgctatct gcaaccaacc tctgccctgg tgccagtagt ccgaggtaat
     4141 ccccagctgc ccgggtttgc ttgaccgtct gccacaatga ctcgacatac ggtccctcgg
     4201 tttgaatgga aacactcacc tttacccgca actgccaact cagcctagca ctccagaaca
     4261 ccagacaagc ctcgggctgc tgctgcacct ccgtgacttt agggctgcgt cgatcggtat
     4321 agatctcgag tatcccgccg ttgtgatcat cggtggtgct gctattggcg ttgatggcgg
     4381 tagggatgaa cttacgcaac accacggttc tggcgtttgg cataccgtca aacgtgctgg
     4441 tagccaacac cggggtgcgc cacgcgtgat gacggtcatg cgtggcgcgc acgagttctt
     4501 tgtagatctg cgcttgaatc tcttcgggtg tctcaaagtg gttttgcatg gacggggcgg
     4561 ataggtggtc gtttgagtgt cggtgcggta atgaacgggg ttttacctgc accagaggat
     4621 tccatggata tgatatgtgt cactagggca agtagtgcta aagccttcat ggcctgccct
     4681 taattgaacc acaccgctag aaatcagatt tctaaacacg gtcacttctg cctttgccat
     4741 gacccgacgc aattcaccac gtgacataca ggaacttgac gatctgtcgt cactggaccg
     4801 catcgtcacg gacaaacgac tacaaaagcg agcttcggcc aagaagagtc ggcgcaaccg
     4861 tcactacgag aaacaattca tccgcaacgc cctgacccat cgcttggact gagaatcggg
     4921 tctggtccgg ctcgctgcca cctgactgat gtacgctctc gttttgtgtt tggcttgcga
     4981 gacctttatg ctggcactga ttatttttct gctcacgctc gtgctggtca tttggcagcc
     5041 gcgcggtgta ggcattggct ggagcgccat ggcaggtgct gggtcggcac tgatgcttgg
     5101 cgtggttgac ctgcaagatg tattgaccgt ctggcacatt gtgtgggatg cgacgttcac
     5161 ctttgtagcc ctagtggtga tttcgttaat actggagcgc gcaggatttt ttgcgtgggc
     5221 ggctctgcac gtggcgcgct gggggaaagg gcacgccaag accttgctga tttgggtagt
     5281 cctgctcggt gcagccatgt ccgctttgtt cgccaacgat ggcgcggcac tcttgttaac
     5341 accgattgtg attgtgctgc tgcgcaagct cgggttttct gcggcgacgt gcctggtgtt
     5401 tatcattgcc acgggcttta ttgctgatac ggcaagcctg cccttgatca tctcaaactt
     5461 ggtcaacatc gtcagcgcca attactttga tgtttcattt gcccgctatg ccatggtaat
     5521 ggtgccagtg aacctggttg ccgtggcggc aagcctgttg gtattgctgt ggacgtttcg
     5581 ccgagactta cccaaggcat tgacctatca cgacaccaag ctcgaccaac cgcaagacgc
     5641 cattgaagac aagttggtgt ttacctgggc catgccaatc atggcgttgc tgctggtgac
     5701 ctattttgtg acggggcagt acaacgtgcc cacagcattt gtcaccggtg ccgcggcact
     5761 ggcatttctg gcactcgctg cgcgcatatg ggacaccaaa gcccgccgcc ttgggctggt
     5821 cggtcagttg ttaaagcaag caccatggca aatcgtgatc ttctctgtgg gtatgtatgt
     5881 ggtggtctat ggcttggcgc aagccggctt gaccgacctt ggcgtgcgcg ccctgcactg
     5941 gttggcacaa caaggtgaca ttgtggccac cgtgggcact ggcttcttgg cagcggtcac
     6001 ggcatcgatc atgaacaaca tgcccgccac actcgtgggt gtgctcagca tcgatcaggc
     6061 caatttgcca gcacacacac aagaactgat gatgtacgcc aatgtgattg gcaacgatct
     6121 gggtcccaaa ctaaccccta ttggcagtct ggccaccctg ctttggttac acgtgctgga
     6181 ccggaacgga tttcacgtca cctggggaca atacatgcgc attggtattg tcatcacccc
     6241 gccggtgttg ttggtgactt tgctggcact cgccctgtgg ttgccggtgg tgtgatagct
     6301 gattgtggtg tgggttgtag gtcgatgtta cggtcaaatg tggcgcccac tcaaaacagc
     6361 ctagggtaaa aaattgggat ccaatgggtg cctcaatctg aggcacccat tgctcgagag
     6421 acgattttca agatactggt ctgaattcct acgcccagaa ttgcttaatc tcatctacct
     6481 cttttttagc gcgctcatac ccagcctgaa tggctggctt gatttcattc gggtttgtta
     6541 ggctaatgcc gggtggcgtg ccagcaataa tccacttgac cttggtgcca gtggcctcga
     6601 gatccttgat attttgagcc atgggatgag ggattttagt gagtatggca cccgtgacgc
     6661 catcggtcag cgtgatcacc aatgcacgct tggatcccgc caccaagtcg acatgcgcag
     6721 gggtcgaaca catgccaccg tccatcgagt agcgttgacc gatgagcgtc gggccaatga
     6781 tcccgggaag cgagctgctc gcggctgtgg cgtgagccaa aggaatgcca ttcttacgcg
     6841 cggtgtcctg actcacgacc aaacgttcgc cggtgtagca gtcaacaccc gtcgtgtgca
     6901 tttttggcgc tggccagctg gttttactgt cccccgtcaa aagtgccgca agagactcga
     6961 caccaggacc attgaggtgg ttgtcagccg ccaatgccgc gcgccccaga acttgccggg
     7021 tttcgatact gccattggtg gcggccatgt tgatttcctt ggctcgcttc tggctggtgt
     7081 tcgggttact cagtggcgct attttggcaa agagcttggg gaactcgccg aagaaatcca
     7141 tctctttgcg caatctcgag aagtgcccag acgttagtga tgagcccatg taggcgcccg
     7201 ctgacgtgcc aacgaccatt tcaggcagct tctccatctc gagccctgct tcgaacaacc
     7261 catgaaaaaa gccgcagtac caggcaagat agtactcacc accaccacct agcaccaagg
     7321 ttcgatcaag ccctttggcc agaggagaga cggttggttt ggtcgggatc ggaacagcaa
     7381 gcccatcatc agcatatagt ttttgagaga tgaggtcagc tttttgtgcg tagtcatctg
     7441 aatcagatcc ggacgaagcc tgtgcagtac cggaaagcac agtggcagaa ccaacgagtg
     7501 ctggcaatgc gagtgacgag gactttagaa agtggcggcg cgacatcata ttctccggag
     7561 gattaaagtc gagtgcacag cttaatcggt ttttgttgag ttttgacaag aattgatgca
     7621 agttatccgc tgatacctgt catgcaacgg tgcagtaagt ggtgctggca gaattagagt
     7681 aagttgcgca aggtagaaat tcaaatatcc ttagccaagt cctatagtgc caaaatccaa
     7741 cacatcaact ggccaagggt ttgatcgggt cccaattaac caacgccgag ttcggttcgg
     7801 ctagcgcaaa caaatagacc aactcgcccg ctcacccatc accgtctcct ctgattggtc
     7861 ccccaatgcg acagcaaatt gttttctgtc agttgtatgc ttggcgccta aaaggcaaca
     7921 ccgaatgct
//
LOCUS       DATBNL010000362         2185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_84403, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000362 DATBNL010000000
VERSION     DATBNL010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84403"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VIC30_06280"
     CDS             complement(<1..920)
                     /locus_tag="VIC30_06280"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY7804025.1"
                     /translation="MLSCVVPAFNEHDNLAVLLPKLKVALQGLTDYWEVVVVDDGSSD
                     TTPDLMAMLSREPGIRYVQLSRNFGKEAALTAGIEAAAGDVVVLMDADLQHPPALLAQ
                     MVARWEVGVDMVYAVRESREDEGWLKRFGSRLFYSLLRSEAGVQVPPHAGDFRLMDRT
                     VVQALMQLPERDRFMKGLYAWVGFQTEALPFMPESRMSGKSHFSAWRLWRLAMAGLMS
                     FTTWPLRAVSVLGFVVSICSFIYGIFIVVEYLLYHNPVAGWPTIVTILLFFSGINLLS
                     LGIVGEYIARIFKEVKHRPVYLVRQSLGTAA"
     gene            1407..1658
                     /locus_tag="VIC30_06285"
     CDS             1407..1658
                     /locus_tag="VIC30_06285"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HEY7804026.1"
                     /translation="MRKWRMQTAKARFSEVVKYAQHEGPQDVTFHGQSVAVLISRDTY
                     NKLISNDQTLVNFMNKSPLRGAENLVFDRDPSLTREEQM"
     gene            complement(1816..>2185)
                     /locus_tag="VIC30_06290"
     CDS             complement(1816..>2185)
                     /locus_tag="VIC30_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="HEY7804027.1"
                     /translation="EVVWEEVKNHFRPEFLNRIDEVVVFHALQSDQLQAIAEIQIERL
                     AERLKAQDMVLEVTPAALTELARAGFDPVFGARPLKRAIQQKLENPVSKLILQGKFGP
                     NDVVPVDWRDGQFVFDRTLQ"
BASE COUNT          557 a          645 c          526 g          457 t
ORIGIN      
        1 gcggccgtgc caagtgactg gcgcaccaag tacacaggac ggtgcttgac ctccttgaag
       61 atgcgcgcga tgtactcgcc cacaatgcca agtgacagca aattgatccc tgaaaaaaac
      121 aacaatatcg tcacaatcgt cggccaaccc gccaccgggt tgtgatacag caggtactca
      181 accacgataa agatgccgta gataaacgag cagatcgaca ccacgaatcc caacacactg
      241 acagcgcgca aaggccaagt ggtgaaagac attagcccgg ccatggccaa gcgccatagt
      301 cgccaggcac tgaaatgact tttaccggac atgcgactct cgggcatgaa tggcaaagct
      361 tccgtttgaa accctaccca agcgtagagg cctttcataa accggtcgcg ctcgggtaat
      421 tgcatcaatg cctgcaccac ggtgcggtcc atcaagcgaa agtcacctgc gtgcggtggc
      481 acctgaacgc ctgcctcact gcgcagcagg gaataaaaca gccggctacc gaaacgttta
      541 agccaccctt cgtcttcgcg actttcgcgc acggcataga ccatgtccac accgacttcc
      601 cagcgcgcaa ccatctgcgc gagcaacgcc ggcgggtgct gcaagtcagc atccatgagc
      661 accaccacat caccggcggc agcttcaatg cctgcggtta aagccgcctc tttgccaaaa
      721 ttacgtgaca gttgcacgta ccgaataccc ggctcgcgcg agagcatggc catgagatcg
      781 ggcgtggtgt cactgctgcc atcatcgacc accaccactt cccagtaatc agtcaaaccc
      841 tgcaaagcca ctttcagctt aggcagcagt accgcaagat tgtcgtgttc attaaacgcc
      901 ggcaccacgc aactcagcat cgactcgctg atttgtcgct gcgtgggggt ggtcgcggtg
      961 gtcttcgcgg tgttcttatc cgactcgagg gtatcttcca tggtctacca gtgtgtctcg
     1021 ggctttaaag cccgtcatct aaagcccccc aatcatacct gtttgcttgc gaccaccgca
     1081 aaaaacagcc cctagaaata acgaggcgcg gctgaggttt tgattggcca gatggctgct
     1141 aggcatctgc tgtcaaagct attcacgcac aaggctcctt gttgtcaagc atttcggtgc
     1201 cgcactagga tttacacgaa cagctcggat tgatccattt gagccccaac agttaagcaa
     1261 cctcaggcat gctacgcacc tttcttaaaa ccatcagagg cgcacatggg ccgtatagcc
     1321 gcaggcaaag ctcttcacac cacaagtaga agcacatgct agacggcgac taatctagtc
     1381 agaagaaaag gaaggaaagg aaagatatgc gaaagtggcg aatgcaaact gcaaaggctc
     1441 ggttttctga ggtcgtgaaa tatgctcagc acgaaggccc tcaggacgta acctttcacg
     1501 ggcagtccgt tgctgttctg atttcacgcg acacatataa caagttgatc agcaatgacc
     1561 aaactctggt taatttcatg aacaaatcac cgctacgtgg cgcagagaat ctggtttttg
     1621 atcgggaccc ctccttgaca cgcgaggagc aaatgtgacc attacggtaa gctccgccgt
     1681 tcagggtgag gaggtgatca agtatttggt tgacaccaac gtactatcct aatctcaaaa
     1741 aaacagcctt gcaccacctg gttattgcta accgtgtgcg gtgccactta gcaccgcacc
     1801 caatcacttg cttgattact gcaaagtccg atcaaacacg aactgaccat cacgccagtc
     1861 aactggcacc acgtcattgg gcccaaactt gccctgcaaa ataagcttgg agacggggtt
     1921 ttccagtttt tgctggatgg cccgcttaag cggtcgtgcc ccaaacactg ggtcaaaccc
     1981 cgcgcgcgcg agctcagtta aggccgctgg cgtgacttcc agcaccatgt cctgcgcttt
     2041 cagacgctcg gccaatcgtt cgatctgaat ctcagcaatc gcttgcagct gatcgctttg
     2101 cagcgcatga aacaccacta cctcatcaat ccggttcaag aactccggcc tgaagtggtt
     2161 tttgacttct tcccacacca cctct
//
LOCUS       DATBNL010000363         3437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_193376, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000363 DATBNL010000000
VERSION     DATBNL010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193376"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..1050)
                     /locus_tag="VIC30_06295"
     CDS             complement(214..1050)
                     /locus_tag="VIC30_06295"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY7804028.1"
                     /translation="MTGWSWLAAFSAQPDPVLCTILAVAAALLMGFARSGIGAGGFVV
                     SPLMVLALGPTVGIAVVAALMLPAAATSWWQHRSDAEPHILRPLIPAAFVGTAVGGVL
                     LWWLVSSGHLALVHRRLEVVVAGLSLLYVALVMLRKPLAHLAGENFKATPKGLFLVGT
                     GLGLSQTVANSGAPLMTVYFLCCRIGKEQFVGAQATFLLIQNILKFIPLSLLGLLHLG
                     NATAALVLMPLTFFGSWLGQRFYKLATERLFFAVYVILLILGFAASVLLIIGRQAVLG
                     WL"
     gene            complement(1047..1940)
                     /locus_tag="VIC30_06300"
     CDS             complement(1047..1940)
                     /locus_tag="VIC30_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEY7804029.1"
                     /translation="MVRSPTPSSGQKLTAKRTTKRMVVSRLQHGWLNAMGVDVPWIVA
                     QSPVGQSAEPAAPTSTATSATPAKSNATPPLPPRAPKRAPAVFAPASSAVTAEQSPES
                     SLKRLNLADLTLAELAQTIQSCQRCGLCQARQQAVPGEGVDKPAILIVGEAPGEQEDM
                     QGKPFVGRSGQLLQNMMSAIGHGRDTSVFITNVVKCRPPANRNPRDDEIAACAPYLAR
                     QIELLAPQAILAMGRFAAHALLKTEAPLQQLRADTHSIDVAGVARPVVVTYHPAYLLR
                     RPVDKRLAWEDLKRLRALVSV"
     gene            complement(1947..3173)
                     /gene="tsaB"
                     /locus_tag="VIC30_06305"
     CDS             complement(1947..3173)
                     /gene="tsaB"
                     /locus_tag="VIC30_06305"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEY7804030.1"
                     /translation="MKPILAIETTTRTGSVAVLRDDDGGLQLFDAALTDQNGHAQTLL
                     PLVDSVIKQAGLVPADIGLVAFGQGPGAFTGIRLGCSVAQGMALAFEVPVVAVNALQA
                     TAAAFASPGTVTLVALDARMQEVYFAVYGPGGIELQAPVLLAGADVPRFVEPRLPYWQ
                     RAVGATAPAALVGEGWQVVDAAVSDGWPGSLAVEAFDDQARPHAREVALVAQQRWRAG
                     QTLLPEQALPLYLRDKVAFTTEERQQGLGGNPKVASLDNTLVLPMMPVDLTEVVELER
                     QSQAFPWSRRNFEDALAANYPAWVLRMDGRLAGFCVAMATPDDVHLLVIAVAPDFRGR
                     GLARQLLGQVDRLASNLGLTRVLLEVRPSNERALSFYRREGFVQIGQRKGYYPAGRGA
                     REDALVMARDLNELAV"
BASE COUNT          835 a         1075 c          905 g          622 t
ORIGIN      
        1 caaacatcca tagaaacgat aacgtggcgt agttaaagcg gcgcagataa caccacacag
       61 atcacgcaac gagataatgc aacgcgctta gcgcagcgta aataatgaaa cacggattga
      121 gtgaccatac gtcacttaga atggttttgt ctagcttagc ccgttgtttt taagggatat
      181 aaacgcatca gcgccatccc gagaattctg tactcacaac cagcctaaaa ccgcctgacg
      241 cccaataata agcaacacac ttgctgcaaa cccgagtatc agcagaatca cgtacaccgc
      301 aaaaaacaat cgctcggtgg caagtttgta aaaacgctgc cccagccaac tcccaaaaaa
      361 cgtcagcggc atgagtacca acgcggcagt ggcgttgcca aggtgcaaca acccgagcag
      421 acttagcgga atgaatttga ggatgttttg tatgagcaaa aacgtggctt gtgcgcccac
      481 gaactgctct ttgccaatac ggcaacacag aaaatacacg gtcatcagcg gcgcacccga
      541 attggccaca gtctggctta accctaagcc tgtgccaacc agaaacaacc cctttggcgt
      601 ggctttgaag ttctcaccag ccaagtgagc caagggcttg cgcaacatca ccagcgccac
      661 atacaacagt gacaaaccag ccaccaccac ttcgaggcgc cggtgcacca aggccaagtg
      721 accacttgag accaaccacc acaagaggac gccaccgacg gccgtgccga caaaggcggc
      781 aggaatcaaa gggcgcagaa tatggggctc cgcatctgaa cgatgttgcc accaggatgt
      841 ggcggctgcc ggcaacatga gtgcggccac cactgcgatt cctactgtag gaccaagcgc
      901 caacaccatg agcggtgaca ccacaaaccc gccggcgccg atgccacttc gtgcaaaccc
      961 catcagcaag gccgctgcca ctgccagtat ggtgcacaac accggatcgg gttgtgcgct
     1021 aaaggccgcc agccaagacc agcccgtcac accgacacca gtgctcgcag gcgtttcaag
     1081 tcttcccaag ccaagcgttt gtccacgggt cgtctgagca agtaagccgg gtgataggtc
     1141 accaccaccg gtcgtgcaac ccctgccacg tcaatgctgt gcgtatcggc acgcaactgc
     1201 tgcaacggcg cctcggtttt gagcaaagcg tgtgcagcga accgacccat ggccagaatg
     1261 gcttgcgggg ccaacagctc aatctgacgc gcgagatacg gcgcacaggc agcgatttca
     1321 tcatcgcgtg gattgcggtt agctggtggg cggcacttga ccacgttggt aataaaaacg
     1381 ctggtatcgc gcccatgccc aatggctgac atcatgttct gtagcagctg tcccgaccgt
     1441 cccacaaacg gtttgccttg catgtcctct tgctcgcccg gtgcctcacc cacaatcaaa
     1501 atcgctggct tatcaacacc ctcacctggc acggcctgct gacgtgcctg acacagacca
     1561 caccgttggc agctctgaat cgtttgcgcc aactcggcca acgtcaggtc agccaaattc
     1621 agccgcttga gcgaagactc aggcgattgt tcagcagtga cggcgctaga tgcaggcgca
     1681 aaaaccgctg gcgcgcgttt gggtgccctc ggcggcagtg gtggggtggc gttcgatttg
     1741 gctggtgttg ctgatgttgc agttgatgta ggcgctgctg gctctgcact ttgccccaca
     1801 gggctctgag ccacaatcca cggcacgtca acgcccatgg cattgagcca gccatgctgc
     1861 aagcgcgaca caaccatgcg cttggttgtt cgcttggcag tgagcttctg cccggacgaa
     1921 ggtgttgggg atcgaaccat gccctgttat accgccaatt cattaagatc gcgagccatg
     1981 accagcgcat cctcgcgcgc accacggcca gccgggtaat agcctttgcg ctgaccaatc
     2041 tgcacaaacc cctcgcggcg ataaaacgac agcgcccgct cgttcgatgg tcgcacttcc
     2101 agcagcaccc gggtcagccc aaggttactg gctaagcggt cgacctggcc cagtaactgc
     2161 ctggcaagac cccgcccccg gaaatctggc gccacagcaa tcaccagcaa atgcacatcg
     2221 tccggtgtgg ccatggccac acaaaaacca gccagcctcc catccatgcg caacacccag
     2281 gctggataat tggcagccaa ggcgtcttca aagttacgtc tgctccacgg aaacgcctgt
     2341 gactgacgtt caagctcaac cacctcagtc aagtcaactg gcatcattgg caagaccagc
     2401 gtgttgtcta gtgaagcaac tttagggttg ccgccaagtc cttgttgtct ctcctcggtc
     2461 gtaaaggcga ctttgtcgcg caggtacaaa ggcaaggcct gctcgggcaa cagtgtctga
     2521 ccagcacgcc aacgctgctg cgctaccaag gccacctcgc gggcatgcgg gcgggcttgg
     2581 tcatcgaatg cctccacagc cagcgaacct ggccagccgt ctgaaactgc tgcatcgacc
     2641 acctgccagc cttcaccaac cagcgctgct ggcgcagtcg cacccacggc gcgttgccag
     2701 tacggcaagc gcggctcgac aaaccgcggc acatcggcac cggccagtaa gactggcgcc
     2761 tgcaactcaa taccacctgg cccatagacg gcgaaataca cctcctgcat gcgcgcatcg
     2821 agagccacga gcgtcacagt gcccggactt gcaaacgcag cagctgtggc ctgtaacgca
     2881 ttaaccgcta ccacgggcac ctcaaatgcc agggccatgc cttgcgccac actacaacct
     2941 agccgaatcc cagtaaaagc gccgggacct tggccaaacg ccaccagtcc gatgtcggct
     3001 ggcaccagac ccgcttgctt gatgacgctg tcaacaagcg gcaacagcgt ctgggcgtga
     3061 ccgttttgat cggtgagtgc cgcatcaaac aactgcagcc cgccgtcatc gtcgcgcagc
     3121 acggccacgc tccccgtgcg ggtggtggtt tcaatagcca gaatgggttt catgaccgcg
     3181 attgtaaaca ctcgggtgca ccggcaccgt gcagtggcat cacagtgcta ggccttgacc
     3241 gtcagaacgg tttttagaca accgaaagac caaaaagccc atcagtgcat gggaataagt
     3301 gcatgggaat aagtgcatgg gaatacgtgt acgggaaggc gctcgccaca cttgagacgt
     3361 ctgttattag cacaaaccat tagaaaggtt tgtttgacga aatttcgtgc gacgagtact
     3421 tgacagcgcc ttcgcca
//
LOCUS       DATBNL010000364         5346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_24141, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000364 DATBNL010000000
VERSION     DATBNL010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24141"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            647..925
                     /locus_tag="VIC30_06310"
     CDS             647..925
                     /locus_tag="VIC30_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HEY7804031.1"
                     /translation="MAATTMVHVRIDESIKTQAAETLASMGLTVSDAVRVFLTRVVAD
                     KELPFVVKAPNARSRAAMTQTDEIIKSRRARFTNADALIDDLEKASLK"
     gene            1032..1226
                     /locus_tag="VIC30_06315"
     CDS             1032..1226
                     /locus_tag="VIC30_06315"
                     /inference="COORDINATES: protein motif:HMM:NF027074.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HEY7804032.1"
                     /translation="MALLTGNEGPFPPEWLDHPLTGDWAGYRECHIGGDFLLIYKLDD
                     SGKHGFVVFVRSGTHSELFS"
     gene            complement(1514..2917)
                     /locus_tag="VIC30_06320"
     CDS             complement(1514..2917)
                     /locus_tag="VIC30_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804033.1"
                     /translation="MLGLSAPNAAKTSTDLELTQRDIAFGLSGVAVSATIVAFDATII
                     STILPDVARALNGMDLYSWAAAAYFLAVSVTILIFGRLSDLFGRKALMLCSLLVVSIG
                     SIVGGLAGSMEVLILGRAIQGIGGGMLIGTAFAAPADLLPDPKVRVKWLAFLSATYAV
                     ASGVGPALGGALTEAFGWRAAFFVIPLTAVCAAPLLWFFYPSRRKPSVPLKIDWIGLF
                     LLVYAIGVPLVAIEQFGRPDSTWPNWLEWSLIASGLGAAWLLFTVERNQQTPIFPVRI
                     LQTRSARLLNLSSVISGAVMFSLIFYVPLLFQASFDLSPTQSGLLITPIVAGAPVGSI
                     INGRLFSRVQRPQYIMVSGAFVLAAGCGLLLTLTAESSVHVIFLIMGLCGVGLGLLLS
                     NYNLLMQIVVHRDDVGVGTALIQTTRALGSAIGTTLVGLAIAHTSITTGIQISLAICV
                     VLCLITAYLTWRVTLPQ"
     gene            3114..4484
                     /locus_tag="VIC30_06325"
     CDS             3114..4484
                     /locus_tag="VIC30_06325"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY7804034.1"
                     /translation="MITGDGHTMLSNATVHVVNDKIVDIDASGNRPPLVGNDHAIRVI
                     NAERGFVIPGVVNAHAHGCTTGPVFSSAAAPLDREHAWRNADRHLAAGVTTLINVCGL
                     GDQQDLTALDDHPMRIFISTTHFAEAFAAARIVDGAGLSGRHEALHAQEMLSGGQAVA
                     IGEVGSGATLGGGVSSYKYVPQAVREIFGQEIDAAQAGQLIDSLLGARRELPERDEAF
                     DGCLLKLGLIKENNSQDPKVAQLKEAIMRYAYEPVAHSLKTFEQAAALSAQTQYPAVF
                     HTALPSVATLLEIATKPLYRDAILVAGHMNHTSIPLEDMLVYAAKLKDAGVVIDVSVL
                     DSVSTRQLVTPKEIDALMASGLVDTLSTDYAAGHWDSMLEAIQRWWRKGIVPLPKGVE
                     MATSRPAAIFKAAAERRGRLAPGYCADIVITEEVNIGRVRTVIIDGRVVREFDAVVPR
                     HMDCCS"
     gene            complement(4490..>5346)
                     /locus_tag="VIC30_06330"
     CDS             complement(4490..>5346)
                     /locus_tag="VIC30_06330"
                     /inference="COORDINATES: protein motif:HMM:NF014381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HEY7804035.1"
                     /translation="NELIILTVPAYAQDVYLEQVARHARDDTMVLIQPGKFGALRLVN
                     LLRQQQRVPSALLIGETSTFLYAAKMHGLDRIWLRGVKKELPLAAWPASRTQEMLDRL
                     HTVNHQYVPAQNVFATSIDDVSYAIHPVTTLLNLSRLEVMGPYRTDCYDITPQVSRMV
                     EAVDDERCRIAAAFDIHVSPFLEQAKSMYGMQGDSVYEAMQQTTVHRNQMTPHGADHR
                     YVTEEVPFGLVPLLELAKVAGVHVPAIQAIVTTASLVNATDYEREGRHLDALGFGSMS
                     VADILQRL"
BASE COUNT         1394 a         1449 c         1347 g         1156 t
ORIGIN      
        1 tggcaaaatc aacaccatgt caaaaacggg catacaagac caatctgacc tgcttttccc
       61 gcttgtccct gttacgctct gctgacaccg aattgaaatt ttgcgtgggg aacaaaattt
      121 ttccccacat taacgcaaag cctttattca tggggctttt gtgtccggcc ccgggcgcca
      181 cgcataagtt attgatttat aatggttttg atgtccgccc actgtgggct ctaccccatt
      241 acggggggaa tagtatccat tacacccggt taatgacacc attccaaccg cacagagcca
      301 agactctcat ccggtaactt tcaaagcacc tgaaaccgag aacacgccga tagaataccc
      361 ctatctttcg cgactccgtt aagtcattca aattcaaaac ggctaacacg aagcacggaa
      421 tggccaacac tcctagtgtt taaaacgaca gcctatcaag caacagtcac ccccaaaaaa
      481 gcatactgag tatgtggtga cgagcaagcc gcacaacgat aaatcgtccc ccgacggata
      541 cgtgccctag gcgggcgcaa tattgacgca atcaatcttg acacgattga cgttgcctct
      601 caattgagat acgttgtata tcaaacactc tcaataggag catgttatgg cagccacaac
      661 aatggtgcat gtacgcatag atgaaagcat caaaacgcaa gcggccgaaa cgctagcctc
      721 aatggggcta acagtgtctg acgccgttcg tgtatttctc acacgagtcg tcgccgacaa
      781 agagcttcct tttgtggtta aagccccaaa tgcgcgtagt cgtgccgcaa tgactcaaac
      841 cgatgaaatt atcaagagcc gtcgtgctcg ctttaccaac gccgatgctc tgattgatga
      901 cctcgaaaaa gccagcctca agtaaacgcg ccaaccttcc gcgggcatcc gattacacca
      961 aagaatttct aaaagactgg aaacgactct ctcactcggg gcggtatgac atgaaccgac
     1021 tcaaataggc aatggctttg ttgactggta acgaaggtcc atttccgcct gagtggctcg
     1081 atcacccact aactggtgat tgggcgggat atcgtgagtg ccatatcggt ggtgactttc
     1141 ttttgattta taagctcgat gactctggca agcacggatt cgtcgtgttt gtgcgcagcg
     1201 gcacccattc ggagctgttc tcctaattcg acaactgcgg catgatggct gtcttgccat
     1261 catgccgcaa agcgactttg tcccgctttt cccgattgtc cctgttgcgc cctgctgaca
     1321 ccgaagtgaa attttgtgtg gggaacaaaa ggacttcccc aaccccgcaa agcgtttatt
     1381 catgcgactt ccgtgtcctg cccaaggcac cgtggctgac cagaggcagt cgggacgccc
     1441 aaaaactgga gtttccctag caataggcaa tgaccagtta tcaccgcgcc caggtttgtc
     1501 ctaacaaagt gtcttattgg ggtaaggtga cgcgccaagt cagataggcg gtgatcaggc
     1561 aaagtacaac gcagattgca aggcttatct gtataccggt cgtgatcgat gtgtgcgcaa
     1621 tcgccagacc taccaatgtc gtgccgatag cactgcctaa tgcgcgggtg gtttgaatca
     1681 gggcagtccc aacgccaaca tcatcccgat gcacaacgat ttgcatcagc aagttgtaat
     1741 tcgacagcag cagccctaaa cccacgccac acagccccat gatcaagaaa atgacatgca
     1801 ctgaactttc cgcggtcagc gtcaataaca gaccgcagcc agcagctaag acaaacgcgc
     1861 ctgagaccat aatgtactgt gggcgttgaa cacgtgagaa taagcgccca ttaatgatgc
     1921 tgccaactgg cgcgcctgcc acaatgggtg tgatcaacaa tccagactgg gttggtgaca
     1981 gatcaaatga cgcttggaac aacagtggca cgtagaaaat taacgaaaac atgaccgcac
     2041 cactgatcac cgaggagaga ttaagcagtc gtgcggaacg cgtttgcaaa atacggaccg
     2101 gaaaaatcgg tgtctgttgg tttctttcca ctgtgaacaa tagccaggcc gcacctaacc
     2161 ccgaggcgat caaactccat tccagccaat tgggccacgt gctatctggc cggccaaact
     2221 gttcaatcgc cactaaaggc acacctatgg catagaccaa caaaaacaga ccgatccagt
     2281 ctatttttaa cggcacgctt ggtttgcgcc tggaaggata aaaaaaccaa agtagcggag
     2341 cagcacaaac agccgtaagc ggaatgacaa aaaatgctgc acgccagcca aatgcttctg
     2401 tcagtgcacc accgagcgct gggcctacac cgctagccac tgcataagtg gcagacaaaa
     2461 acgccaacca tttcaccctt actttggggt cgggcaagag atcagcaggc gcagcaaagg
     2521 ctgtgccaat caacatgcct ccgccgatgc cttggatggc gcgcccaaga atgaggactt
     2581 ccatgctgcc agctagaccg ccgacaattg aaccgatgga cacgacaagc agtgagcaca
     2641 acatgagtgc ctttctgcca aacagatcac tcaaacgacc aaaaatcagg atggtaaccg
     2701 agaccgccag aaaataggct gcagctgccc agctgtacaa atccatgcca ttgagcgccc
     2761 tagccacatc cggcaggatg gtactaatta tggttgcatc aaacgcaaca atcgttgcac
     2821 taacagcaac acctgaaagt ccgaatgcga tgtcgcgctg agtcagctcg agatctgtcg
     2881 aagttttcgc agcgttaggc gcggataaac ccagcatagc aatacaccaa agaaaacacc
     2941 gacggacagt atcagtctgt tacatgaagc gtcaagccac ggccacacgt tcgatgtttg
     3001 cctcgagcaa ccacttgtct taatgtttta cattgcaggg tattctggga actaaacact
     3061 gatgcgagag gcttgccgtg gaacaatcag agctatacat cgtaggaggc acggtgatca
     3121 ctggagatgg tcacaccatg cttagcaatg ccaccgttca tgtggtcaac gacaagattg
     3181 tggatattga tgccagcggt aaccgcccgc cgctggtggg caatgaccac gccattcgag
     3241 tcatcaatgc tgagcgagga ttcgtgattc ccggcgtggt caatgcacac gcccatggct
     3301 gcaccaccgg tcccgtgttc tcttctgccg cagcacccct tgacagggaa cacgcctggc
     3361 gcaatgcaga ccgtcatttg gctgctggcg tcaccaccct gatcaacgtg tgcggtctag
     3421 gtgatcagca agatctgaca gcgctcgatg atcatccgat gcgcatattt atatcaacca
     3481 cccactttgc tgaggccttc gccgccgctc gcatagtaga tggtgctgga ctgagcggca
     3541 gacacgaggc acttcatgcc caagagatgc tgtccggcgg gcaagccgtg gccattggcg
     3601 aagtgggcag tggtgcaacg cttggtggtg gtgtatcgag ttacaaatat gtacctcaag
     3661 cggtcaggga aatctttggc caagagattg atgcggcaca agccgggcaa ctgattgaca
     3721 gcctgcttgg cgcaagacgc gagctgcctg agcgcgatga ggcatttgat ggctgtctac
     3781 tgaagcttgg cttaatcaaa gagaacaaca gccaagaccc caaagtcgcg caactaaaag
     3841 aggcgattat gcgctacgcc tatgaaccgg ttgcacactc gttaaaaacc tttgagcagg
     3901 ccgccgctct gtcagcgcaa acacaatatc cagcagtctt tcacacggca ttgccctcgg
     3961 ttgccaccct gctggagatc gccacaaaac cgctctaccg ggatgcgatc ctggttgcgg
     4021 gtcacatgaa ccacacatca ataccacttg aggacatgct ggtctatgcc gcaaaactga
     4081 aggacgcggg tgtagttatt gacgtttctg tgttggactc ggttagcacg cgtcagcttg
     4141 tgacccccaa agagattgat gcattgatgg cctcaggtct ggtcgacaca ctgtcgactg
     4201 actacgctgc ggggcattgg gactccatgc tcgaagcaat ccagcgatgg tggcgcaaag
     4261 gcattgtgcc gttaccaaag ggcgtggaga tggccacttc aagaccagca gcgatattca
     4321 aggccgccgc cgagagacgc gggcgactgg cgcccggtta ttgtgctgac atcgtgatca
     4381 ccgaagaagt caatattggt cgtgtacgca ccgtgatcat cgatggtcgg gttgttcgag
     4441 agttcgatgc cgtcgtgcca cgccacatgg actgttgctc ataggttagt taaagcctct
     4501 gcaaaatatc agcaactgac attgagccaa aacccaaggc atcgaggtgg cggccttcac
     4561 gctcgtagtc tgtcgcattg acgagcgatg cggtggtaac gatggcctga atggcgggta
     4621 catgcacgcc ggcgactttg gctagttcta ataaaggcac cagtccgaag gggacttctt
     4681 ccgtaacata ccgatggtca gcgccatgcg gcgtcatctg gtttcggtgc accgtcgtct
     4741 gctgcatggc ttcgtagaca gagtctcctt gcatgccata catggacttg gcttgctcca
     4801 gaaatggact gacatgaata tcgaatgctg cggcaatccg acaacgttcg tcatcaactg
     4861 cctccaccat gcgcgagacc tgtggcgtaa tgtcataaca atccgtacgg taggggccca
     4921 tcacctcaag gcgcgacaaa ttcaacagtg tcgttaccgg atgtatcgca tacgagacgt
     4981 cgtcaattga ggtggcgaac acattttgtg ccggaacgta ttgatgattg acggtgtgta
     5041 acctatcgag catttcctga gtacgacttg caggccaagc agcaagcggt agctcttttt
     5101 ttacgccacg caaccaaatc cggtctaatc cgtgcatctt ggctgcatac agaaaagtgc
     5161 tggtttcacc gatcaatagc gcactaggta ctcgctgctg ctggcgcaac aagttcacca
     5221 gacgtaaagc gccaaacttg cccggttgaa tcaacaccat ggtgtcatct ctggcatgtc
     5281 tggctacttg ttcgaggtaa acatcctgcg cgtacgcagg cactgtcaaa atgatgagtt
     5341 cattgc
//
LOCUS       DATBNL010000365         1691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_94135, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000365 DATBNL010000000
VERSION     DATBNL010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94135"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..765)
                     /locus_tag="VIC30_06335"
     CDS             complement(<1..765)
                     /locus_tag="VIC30_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804036.1"
                     /translation="MRRDVIYPNINIAIQFDMPDTFDRHCVLAWLNHLQPNTVAPDNR
                     PDLSLNPTKAFIECCARLALTLLQLGRIPIFDTPKLLRVVTADESTQNGTRCRGDFQV
                     QALDFVGLPIFELVFKVAVQLVAAVNSRSLSSDNRQAVYNHISQKVLGPLRAAIPGAG
                     GQSTIPLLQCAHKLELPFIHIGGGVYQVGLASKRIRIDRGVVEHDSIIGAKLAANKAL
                     SAKALQMAGLPAPRHIVCRNREELIAQFDRLTHPVVI"
     gene            complement(983..>1691)
                     /locus_tag="VIC30_06340"
     CDS             complement(983..>1691)
                     /locus_tag="VIC30_06340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804037.1"
                     /translation="GTLLCLMRKRGQAAAGRGTADRVKAGQAAEALAKQLLAWCPMDN
                     LGVRYLLGDIALLRGDLKVAMKEYLKEAPNSPANWYQLALISFRQEDYVAACTYLRRG
                     IAANPYIAEGLTGRTLLAEHLYWHGSNVYGSDWAIDYLESTASDWTFEEIDFVDWVFN
                     ASPVLKERAQMMALREEITYERDPEKRVSIVRRSDALENRITNTLSKKMVVKVKNRWD
                     EYIWPWDREGFEGPRHR"
BASE COUNT          404 a          481 c          430 g          376 t
ORIGIN      
        1 gataaccaca ggatgggtta atcgatcgaa ctgcgcaatc agctcctcgc ggtttcgaca
       61 gacgatgtgc cgtggtgctg gcagtccggc catttgcaag gccttggcgc ttaacgcttt
      121 gttagccgct agtttggcgc caatgatcga gtcatgttcg acgaccccgc gatcaatgcg
      181 tatgcgctta ctagccaagc cgacctgata gacaccacca ccgatatgaa taaaaggcaa
      241 ctcaagctta tgggcacact gcaaaagagg aatcgtcgat tgaccaccag caccaggtat
      301 tgccgcacgc agcgggccca gcactttttg tgaaatatgg ttgtataccg cttgcctgtt
      361 gtcggatgaa agtgagcgag aattgaccgc agccacaagc tgcaccgcca ccttgaatac
      421 gagctcgaag atgggcaaac ccacaaagtc aagcgcctgc acctgaaaat ccccgcgaca
      481 gcgagtcccg ttttgcgttg actcatcagc tgtcacaact cgtaataact tgggtgtatc
      541 gaagatgggg atgcgcccaa gttgcagtaa tgtcagcgcc aaccgggcgc aacactcaat
      601 aaaggccttg gtaggattta gtgataagtc cggtcggtta tctggcgcga cggtgtttgg
      661 ctgcaagtga ttcaaccatg ccagtacaca atgtctgtcg aacgtgtcgg gcatgtcaaa
      721 ctgaatcgcg atattgatgt ttgggtaaat aacgtcgcgg cgcatgcaaa ccccatcaaa
      781 aaaaaaacaa aacattagca gtttttgggt cgcttcgact cagttctcca cgcatctaga
      841 acaaacgcca gtcgcccagt tgacagtgag gtatggcatc gaccagatct gcaacaagcc
      901 gctgctggtc ggcgtgtgcc gacgccgcca acaagtgacg ggtgcaagcc gatggctttg
      961 ttcttcgctt gagccactgc ggttatcgat ggcgcgggcc ctcgaacccc tcacgatccc
     1021 agggccaaat gtactcgtcc caacggtttt ttaccttgac caccattttc ttggacaacg
     1081 tgttggtgat gcggttttca agcgcgtctg agcgcctgac aattgagacg cgcttttcag
     1141 ggtctcgctc gtacgtgatt tcttcgcgca acgccatcat ctgggcgcgc tctttcaaca
     1201 cgggcgatgc attaaacacc cagtcaacga aatcgatttc ctcaaacgtc cagtcagagg
     1261 cagtggattc cagatagtca atcgcccagt cagatccata cacattgctg ccatgccagt
     1321 acaggtgctc tgctagcagc gtgcgcccag tcaacccttc ggcaatgtag gggttcgcgg
     1381 caataccgcg ccgcaggtag gtgcaggccg cgacatagtc ctcttgccga aatgaaatga
     1441 gcgctagctg gtaccagttg gcgggcgaat tcggtgcttc cttcagatat tccttcatcg
     1501 ctactttcag atcgccccta agcaacgcaa tatcccccag caaataacgc acacccaagt
     1561 tgtccatcgg gcaccaagca agcaattgct tggccagtgc ctcggcggct tggcctgctt
     1621 taacccgatc cgcagtaccc cgacccgctg ctgcttggcc acgtttacgc atcaagcaaa
     1681 gcaacgttcc a
//
LOCUS       DATBNL010000366         2035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113779, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000366 DATBNL010000000
VERSION     DATBNL010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113779"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1289
                     /locus_tag="VIC30_06345"
     CDS             <1..1289
                     /locus_tag="VIC30_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY7804038.1"
                     /translation="RSLEANGVPIIGTSPDSIDVAEDRERFQKLLHKLGLKQPENRTA
                     RNQEEALSHAQDIGYPLVVRPSYVLGGRAMEIVHEQTDLERYMREAVKVSNDSPVLLD
                     RFLNHAIEVDVDCLCDGQRVFMGGVMEHIEQAGVHSGDSACCLPPYSLPSETIEEIKR
                     QTAAMARALNVNGLMNVQFAVQDGDVYVLEVNPRASRTVPFVSKATGLQLAKIAARAM
                     AGRSFDDQGLGEEVVPGYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGQSFGEA
                     FVKSQMAASVKLPKSGRVFISVKQEDKPRVVEIARMLSELGFSIVATRGTAAVIEQAG
                     IAVVAVNKVAEGRPHVVDLLKNDGDVGLVINTVEERRNAIADSRAIRTQALANRVTYY
                     TTIAGAWAAVQGMHYLRHGKGLQVYSLQSLHASLKG"
     gene            1314..>2035
                     /locus_tag="VIC30_06350"
     CDS             1314..>2035
                     /locus_tag="VIC30_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006222869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804039.1"
                     /translation="MTRTAFITGASSGIGQALARHYAEQGYTLGLVARRGQRLTEFAQ
                     TLSCDVHTFVVDVRDRAQLHAAAEQFINEVGQVDIVIANAGVSAGTLTECDEDFAVFK
                     DIFDINVLAMVATFEPFVPVMMKQGHGKLVGIASVAGVRGLPGAGAYSASKSAVATYC
                     ESLRLELKPKGIDVVTIAPGYVKSEMTAHNPYSMPFLLEGDVFAKRAAKAIEAKRRYA
                     VIPWQMAIVARLMKVLPAWLYDR"
BASE COUNT          434 a          515 c          619 g          467 t
ORIGIN      
        1 cacgttcact tgaagccaac ggtgtaccca tcattggtac aagcccggat tcgattgatg
       61 tggccgaaga ccgtgagcgt tttcaaaagc tcttgcataa gcttgggctc aaacaacctg
      121 agaaccgcac ggcacgtaac caagaggaag ccctctcgca tgcccaggac attggttatc
      181 cgttggtggt gcgtccaagc tatgtgttgg gtggccgggc catggaaatc gtgcacgagc
      241 agactgacct tgagcgctac atgcgcgagg ccgtcaaagt cagtaacgat tcgcctgttt
      301 tgttggatcg cttcttaaac cacgccattg aagtcgatgt cgattgcttg tgtgacggcc
      361 agcgtgtgtt catgggcggg gtaatggaac acattgagca ggcaggggtt cactccggtg
      421 actcggcctg ctgcttgcca ccgtattcgc tgccgagtga aaccatcgaa gaaatcaagc
      481 gccaaaccgc ggccatggct cgggctttaa acgtcaacgg tttgatgaac gtgcagtttg
      541 ccgtgcaaga tggcgatgtg tacgtgctcg aagtcaaccc gcgcgcttcg cgcacggtac
      601 cgtttgtctc caaggccact ggcttgcaac tggccaagat tgctgcgcgt gccatggccg
      661 gtcgatcgtt cgatgatcaa ggcctaggcg aagaagtggt cccaggttat ttctcggtaa
      721 aagaagcggt gtttccgttt gtgaagtttc cgggtgtgga tacgattctg ggcccagaga
      781 tgaaatccac cggtgaagtc atgggcgtgg gccaaagctt tggtgaggct ttcgtgaagt
      841 cacagatggc ggcaagcgtc aaactaccta agtctggacg ggtctttatc agtgtcaaac
      901 aagaggacaa gccgcgtgtt gtggaaatcg cgcgcatgtt atccgagctt ggctttagca
      961 ttgtggccac tcgtggcacg gctgctgtga ttgagcaagc cggcattgca gtggttgcgg
     1021 tcaacaaggt ggctgaaggc cgaccccacg tggttgattt gcttaaaaac gatggtgatg
     1081 tgggtctggt catcaacacc gttgaagaaa gacgtaacgc cattgctgat tcgcgcgcca
     1141 ttcgcaccca agcacttgct aatcgcgtga cttactacac gacgattgcg ggcgcctggg
     1201 cggcagtgca aggcatgcac tatctgcgtc acggcaaggg cttgcaggtg tattcattgc
     1261 aaagcctgca tgcctcacta aagggctgaa cggttggtgc gcggcggaca cccatgacgc
     1321 gcaccgcatt catcacgggc gcttcaagcg gtatcggtca agcgctcgcg cgtcactacg
     1381 ccgagcaagg ttacacactt gggttggtgg cgcgtcgcgg ccaacgactt accgagttcg
     1441 cgcaaacact gtcatgtgat gtgcacacct ttgtggtgga tgtgcgtgat cgcgcacagc
     1501 tacacgctgc tgccgagcaa ttcattaacg aggtggggca ggttgatatc gttattgcga
     1561 atgccggtgt cagtgccggt acgttaactg agtgcgatga ggatttcgcg gtattcaagg
     1621 atatttttga tatcaacgtc ttggccatgg tggcgacgtt cgaacccttt gttcccgtga
     1681 tgatgaaaca gggtcacggc aaattggtgg gtattgccag tgttgccggt gtgcgcggtt
     1741 tgccaggtgc cggggcctac agcgcgtcga agtcagccgt ggcgacttat tgcgagagcc
     1801 tgcgcctcga actcaagccc aaggggattg atgtggtgac cattgcgcca ggctacgtca
     1861 aaagtgaaat gaccgcgcac aacccctaca gcatgccgtt tctgcttgag ggtgatgtgt
     1921 ttgccaagcg tgcggccaaa gccattgaag ccaaacgccg ctacgcggtc attccttggc
     1981 agatggcaat cgtggccaga ctcatgaagg tgttgccggc ctggctatac gaccg
//
LOCUS       DATBNL010000367         2349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_64248, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000367 DATBNL010000000
VERSION     DATBNL010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64248"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..550)
                     /locus_tag="VIC30_06355"
     CDS             complement(113..550)
                     /locus_tag="VIC30_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEY7804040.1"
                     /translation="MISTQNQTSSVVLSQRLRLTANVSLWLLFLLCIAWELFLSPLRP
                     GGTLLFLKALPLAFAFRGVAKGSIYTMQWAAMLVLLYMMEGVMRAMSDPPGVGILLAW
                     LEIVFSVIFFFSAIFYVRPAKQAAKQAKEAKEKKEAKETSQAQ"
     gene            586..1461
                     /locus_tag="VIC30_06360"
     CDS             586..1461
                     /locus_tag="VIC30_06360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEY7804041.1"
                     /translation="MFDNALNHIWQSSTRIVRAALKDNLLHVAASLAFTTILAIVPLL
                     TVTLSLMTAFPIFSEFETALQQFLREQFLPDAFSATVMRYLDEFVSKATSLSTIGGVF
                     LFITSLLVIMSIDDALNDIWHIKRQRPIGQRLLIYWAVLSLGPIVLGASLWASSSMVQ
                     QALSFQEPGALVPWRTLAAWLPFVMSWVSCTLLYLTVPNCTVGYTPALVGGFVSSILF
                     QVIKFGLGLYLTNIPTYTVIYGAFSVLPTFLVWIYMSWLAFLFGAVVAANLPRCLTPN
                     RVDVHAHHDNIATDP"
     gene            1508..1945
                     /locus_tag="VIC30_06365"
     CDS             1508..1945
                     /locus_tag="VIC30_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017685693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY7804042.1"
                     /translation="MLKVSEILRVKGNTLYTATPDMAVRQAIDTMSEHDIGSLVVMEH
                     GELAGMLTFREILRHLHGNNGTIGEFTVRAIMDDAPLSVTPNTDADELQRLMLSKHSR
                     YMPVMDGPTLMGVISFYDLAQAIVAAQAFENDMLKAYIRDWPT"
     gene            complement(1987..>2349)
                     /locus_tag="VIC30_06370"
     CDS             complement(1987..>2349)
                     /locus_tag="VIC30_06370"
                     /inference="COORDINATES: protein motif:HMM:NF013380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEY7804043.1"
                     /translation="FDASVTALDTFDGVMLGRAAWHDPMILDALSVALGHRADHAVDE
                     DIVQVMVQYAAQQVALGVPLRVIARTLLGFAQGRRGARKWRQMLSDQTLLNDNDPALI
                     WHAWQHIDSRITPVQEPV"
BASE COUNT          542 a          620 c          601 g          586 t
ORIGIN      
        1 cgataacaaa cgatgaaaat aaaaggttta gtgctcatta tggcaccaag tcttaggcgg
       61 cacttcaacc gaatgccttt tatcgaccct ttatcagctt tttgcctcgg ttttactggg
      121 cttgtgaggt ttcttttgcc tcttttttct ctttggcctc ttttgcctgc ttagctgcct
      181 gcttagcggg acgcacgtag aaaatcgcgc taaagaaaaa aatcaccgag aacacgattt
      241 caagccatgc caggaggata cccacaccgg gtgggtccga catggcgcgc atcacccctt
      301 ccatcatgta gagcagcacc aacatggcag cccactgcat ggtgtagatg ctgcccttgg
      361 ccacgccacg gaaggcaaat gccagtggga gcgctttgag aaaaagcagt gtgccgccgg
      421 ggcgcaaagg cgataagaac agctcccagg caatgcacaa caaaaacaag agccaaaggc
      481 tcacgttggc cgtcaagcgc aggcgctgtg acaaaacaac actggaagtt tgattttgag
      541 ttgatatcat gcgtagttat ggtgatgaac agccaaaggg cagcgatgtt tgacaacgca
      601 ttgaatcaca tctggcaaag cagcacgcga attgtacggg ctgcgcttaa agacaatctg
      661 ctacacgtgg cagccagtct ggccttcacc actatccttg cgatcgtgcc attgttaact
      721 gtcacgctgt cattgatgac ggcctttccg attttttcgg agttcgagac ggcgctgcag
      781 cagtttttgc gtgagcagtt cctgccggac gcgttttcag ccaccgtgat gcgttatctc
      841 gacgaatttg tcagcaaagc cactagcctg tcgaccattg gtggcgtgtt tttatttatc
      901 acatcgctgc tagtcatcat gtcaattgat gatgcgctta acgacatttg gcacatcaaa
      961 cgacagcgcc ccatcggaca acgtttgctg atttattggg ctgtgcttag ccttggtccc
     1021 atcgtgcttg gcgcaagcct atgggcctcc tcctccatgg tgcagcaggc actgtcattc
     1081 caagaacccg gcgctttggt gccttggcgc acgttggcgg cgtggctgcc gtttgtgatg
     1141 agctgggtca gttgtacctt gctttattta acagttccca attgcacggt cgggtatacg
     1201 ccagccttgg tcggtgggtt tgtcagcagc attttgttcc aagtcatcaa gttcggactt
     1261 ggcttgtact tgaccaatat tccaacttac accgtgattt acggcgcttt ttcggtctta
     1321 cccacgtttc tcgtgtggat atatatgtct tggctggctt tcttgtttgg ggcagttgtg
     1381 gcggctaact tgccgcgctg tctaacgcct aatcgggtcg atgtgcacgc gcatcatgac
     1441 aatattgcca cagaccccta aaatcaaaac atcattattt cgtgcgcgca cagttggggg
     1501 gggttcaatg ctcaaagtca gtgaaattct tcgggtcaag ggtaataccc tttacacagc
     1561 cacgccggac atggccgtgc gtcaagccat cgacaccatg agtgaacacg acatcggttc
     1621 actcgtggtc atggagcatg gcgaacttgc cggcatgttg accttcaggg agatcttgcg
     1681 acacctgcat ggcaacaacg gaaccattgg cgagtttact gtgcgtgcca tcatggacga
     1741 tgccccgctg agcgtgacgc ccaacaccga tgcagacgaa cttcagcgat tgatgctgtc
     1801 caaacactcg cgctacatgc ctgtgatgga tggtcccacg ctcatgggcg ttatttcgtt
     1861 ttacgactta gcccaagcca tcgtcgcagc tcaagccttt gaaaacgaca tgctcaaggc
     1921 ctacattcga gactggccaa cctaagcaaa ttctggttaa ggaatttttg ttcaagcagg
     1981 aatgttctag actggttctt gaactggcgt gatccgtgag tcaatgtgct gccaagcatg
     2041 ccaaataagc gctggatcgt tgtcattgag caacgtctga tcagatagca tctggcgcca
     2101 tttgcgtgcg cctcgacgcc cttgagcaaa tcccagtaac gtgcgtgcaa tcacgcgcag
     2161 cggcacaccc aaggcaacct gctgggctgc gtattgcacc atgacttgaa cgatgtcttc
     2221 atcgacggca tggtcagccc gatggccaag cgcaactgac aaggcatcga gaatcatagg
     2281 gtcatgccaa gcagcacgcc caagcatcac gccatcaaac gtgtctagtg cagtgacgct
     2341 ggcatcaaa
//
LOCUS       DATBNL010000368         2241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_64252, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000368 DATBNL010000000
VERSION     DATBNL010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64252"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..832
                     /locus_tag="VIC30_06375"
     CDS             <1..832
                     /locus_tag="VIC30_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7804044.1"
                     /translation="MLASAESVFDLIDKEGEDRDTGQDFAGPVGGQVEFRHVTHQFED
                     AQTETLSDVSLLINPGEIVAFVGRSGSGKTTLVNMLPRFVVPQSGSVRIDGIDVRELS
                     LQNLRARLSLVSQDVVLFNGTIASNVGYGTLQNASEHQIRDALAAANLLSFVDSLPNG
                     IHTEVGENATRLSGGQRQRLAIARALIKNAPILILDEATSALDNESERQVQASLETLM
                     KGRTTLVIAHRLSTVQNADRIVVLDHGRIIESGSHQALLNHDGAYAALFKMQFAGEAA
                     "
     gene            complement(888..>2241)
                     /locus_tag="VIC30_06380"
     CDS             complement(888..>2241)
                     /locus_tag="VIC30_06380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009892293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEY7804045.1"
                     /translation="VGSIRLGKVVRVLPGMQSAFIDIGLERAAFIHIADVRENRQERA
                     AGLTPTPIEKLLFEGQTIMVQVIKDPLGTKGARLSTQISLAGRLLVYLPHDPHIGVSQ
                     RIESEAERQALRERVRSLMPEDCPGGYIVRTQAEDASNEALQADIQYLLTLWRHIQAS
                     AKTSAPPCLLYQDLTLPQRVLRDIANSRTARILVDDEQIAHDMRHWAQIYTPEASHKI
                     QAYQGERALFDLSNVEEELKRALSRRVDLKSGGYLIIDQTEALATIDVNTGGFVGGRN
                     FDDTIFRNNLEAAHAIARQLRLRNLGGIIVVDFIDMHEPEHQQAVLDALRQALAQDRT
                     RTTLSEFSPLGLVEITRKRTRDALSHHLCETCPTCQSRGQILTARSVCYEILREIMRE
                     ARQFNPREYRILAAQSVIDLFLEEESQHLAQLSDHIGKPISLEVSTNGTQEQYDIVLI
                     "
BASE COUNT          472 a          567 c          659 g          543 t
ORIGIN      
        1 tatgctggct tcggccgaga gtgtctttga tctgatcgac aaagaaggcg aggatcgcga
       61 cactggccaa gattttgcag ggcccgttgg cgggcaggtc gagtttcgcc atgtcacgca
      121 ccagtttgaa gatgcgcaaa ctgagacact gagcgacgtt tccttgctca tcaacccggg
      181 tgagattgtg gcgttcgtgg gccgctctgg cagtggtaag acgacactgg tgaacatgtt
      241 gccaaggttt gtggttccgc aaagcggttc ggtgcgcatt gatggtatcg atgtgcgcga
      301 actctcactg caaaacctgc gcgcacgcct gtcgctcgtg agccaggacg tcgtgctgtt
      361 taacggcacg attgctagca acgtaggcta tggcacatta caaaacgcca gtgaacatca
      421 gatccgggat gcattggctg ctgccaactt gttgtcgttt gtcgatagtt tgcctaatgg
      481 catccacacc gaggtgggtg agaatgcgac tcgcctctca ggcggccagc gccagcggct
      541 agccattgcg cgagcgctga ttaaaaatgc gcctattttg attcttgatg aagccacatc
      601 tgctttggat aacgaatctg agcggcaagt tcaggcctcg cttgagaccc tcatgaaggg
      661 gcgtacgacg cttgtcatcg cccatcgttt gtctaccgtg caaaacgctg atcgcatcgt
      721 ggtgcttgat catggccgca ttatcgaaag cggctcacat caagcgctgt tgaaccatga
      781 tggtgcttac gctgcgctat ttaagatgca gtttgctggt gaggctgcat aaagccgggc
      841 gcaatcaaca gcgccattta aatcagcaca actcaaacca acaccgttca aatcaacaca
      901 atatcgtatt gctcttgtgt accgttggtg gatacctcta gcgaaatggg cttgccgata
      961 tggtcgctta attgcgccag atgttggctt tcttcttcta gaaacaaatc aatgaccgat
     1021 tgggcggcta ggatccggta ttcacggggg ttgaactgcc gcgcttcgcg catgatttct
     1081 cgcaagatct cgtagcacac gctgcgtgcg gtcaggattt gaccacgact ctgacacgtt
     1141 gggcaggttt cgcacaggtg gtgagataag gcgtcacggg ttcgcttgcg tgttatttca
     1201 acgagcccta atgggctgaa ctcgctaagc gtggtgcgcg tgcgatcttg cgctaaggct
     1261 tgtcttaacg catcgagcac ggcttgttgg tgttcaggct cgtgcatgtc aataaagtcg
     1321 accacgatga tgccgccaag gtttcgcagt cgcaattggc gagcgatcgc gtgggcggct
     1381 tcgaggttat tacgaaatat tgtgtcgtca aagttacgcc cacccacaaa tccgccggtg
     1441 ttgacatcga tcgtggccaa tgcttcagtt tggtcaatga tcagatatcc accggacttg
     1501 agatcgactc ggcgcgacaa ggctcgcttg agttcctctt cgacattgga caggtcaaac
     1561 agggctcgtt caccttggta ggcttggatc ttgtgactgg cttcaggggt gtaaatttgc
     1621 gcccagtgac gcatgtcgtg ggcgatttgc tcatcatcga ccagaatgcg tgccgtgcgg
     1681 ctgtttgcta tgtcacgcag cacgcgctgc ggcaaggtca ggtcttggta gagtaagcag
     1741 ggtggggcgc tggttttagc gcttgcttga atgtggcgcc aaagcgtcaa taaatactga
     1801 atgtcagctt gcagtgcctc gttactggca tcttcggcct gagtgcggac gatatagccg
     1861 ccagggcagt cttctggcat gagggatctg actcgttcgc gcagagcttg acgctcggct
     1921 tcagactcaa tgcgctgaga caccccaata tgggggtcgt gaggtagata gaccagtaga
     1981 cgacctgcga ggctgatttg cgtggacagg cgcgcgcctt tggtgccgag cgggtcttta
     2041 atgacctgca ccatgatggt ctgaccctca aaaagcagct tctcaatcgg cgtgggggtt
     2101 aggccggcgg cgcgttcttg gcggttttct cggacgtcgg cgatatgaat gaaggcggcg
     2161 cgctcaaggc cgatgtcaat aaaggcgctt tgcatgcccg gcaaaacacg cacgaccttg
     2221 cccaagcgaa tgctgccaac c
//
LOCUS       DATBNL010000369         1643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_134052, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000369 DATBNL010000000
VERSION     DATBNL010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134052"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..604)
                     /locus_tag="VIC30_06385"
     CDS             complement(<1..604)
                     /locus_tag="VIC30_06385"
                     /inference="COORDINATES: protein motif:HMM:NF039484.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEY7804046.1"
                     /translation="MRARLILWPALYGALFALTFAPLPLPAWSLAWVQLVVLAIAAHG
                     AFSQTPKEAAITGLMFGLGTFVVGLYWLTISMHVYGQMALPLAWLALLLFSLYLALYP
                     ALAFGLTAWLLSGTDRVRPMSLLWMTTVWASAWTLTEMLRGVVFTGFPWLTTAYGQTD
                     SWISGWSVLAGAAGTTWITAWIAGAVAATLAAEARQRDSTV"
     gene            complement(613..1497)
                     /locus_tag="VIC30_06390"
     CDS             complement(613..1497)
                     /locus_tag="VIC30_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEY7804047.1"
                     /translation="MPEPYPSEPGQEPGDKSKSKKSLVDRILSLVRGEPEDREGIFTV
                     LEAARERELIDSNAYTMLKGALAVSDQTAADIMVPRARMDLLDVNEPLSSLLPKIVEM
                     AHSRFPVYEDSPDNLIGIFMTKDLLRHMLNPTLTLRDLVRPAVFIPETKRVNVLLQEF
                     RSHRNHIAIVIDEHGGITGLVTLEDVLEQIVGAIEDEYDDSEQTIFPDGHNTWRILAT
                     TELEQISELLNCEIPEGDYDTLGGWLAHELGRIPRRGDRHALEDLQFEVLRADSRRAI
                     WVRARRLPHLKAEPTPQA"
BASE COUNT          356 a          462 c          481 g          344 t
ORIGIN      
        1 tgaccgtgct gtctcgttgt cgggcttcag cagccagcgt ggcggccaca gcaccggcta
       61 tccatgctgt gatccatgtc gtacccgctg ctcctgcgag caccgaccaa cctgagatcc
      121 agctatcagt ctgcccatag gctgtcgtca accatggaaa gccggtaaag accacgccgc
      181 gtagcatctc agtcagtgtc caggcgctgg cccagactgt ggtcatccac agcaggctca
      241 tgggacgtac ccggtcggtg ccacttagca accaagcggt cagcccaaac gccagtgccg
      301 gatacaaggc caagtaaagg ctaaacagca gtagcgccag ccacgccagt ggcaaggcca
      361 tctgaccata gacgtgcatg ctgatggtga gccagtaaag cccgacgaca aaggtgccta
      421 gtccaaacat gaggcccgtg attgcagcct ctttgggtgt ttgactaaaa gccccgtgtg
      481 cggcgatggc cagcaccacc agttgcaccc aggccagtga ccaagctggc agcggcagtg
      541 gcgcaaaggt cagagcgaac aatgcaccat acagcgctgg ccagaggatc aggcgcgcgc
      601 gcatgctgtg ggttaagcct gcggggtcgg ttcagctttc aggtgcggca agcgccgcgc
      661 acgcacccag atcgcgcgac gtgaatcggc tcttagaacc tcgaattgca ggtcctcaag
      721 cgcatggcgg tcaccgcggc gcgggatgcg cccaagctcg tgcgccagcc accccccgag
      781 cgtgtcgtag tcaccttcag gaatctcgca gttaagcagt tcactgattt gttcaagctc
      841 ggtggtggcc aagatgcgcc atgtgttgtg gccgtcagga aagatggttt gctcgctgtc
      901 gtcgtactca tcctcgatgg caccaacaat ctgttcgagg acgtcttcaa gtgtgaccag
      961 tcccgtgatg ccgccgtgct cgtcaatgac gattgcaatg tggttgcggt ggctacgaaa
     1021 ctcttgcagc aacacgttca ctcgcttggt ttccgggata aaaaccgctg gacgcaccaa
     1081 gtcacgcagt gtcaaggtgg ggttgagcat atgacgcaat aggtccttgg tcataaaaat
     1141 tccgatcaga ttgtctgggg aatcctcata gacaggaaag cgtgagtgcg ccatttccac
     1201 gatcttgggc aacaggcttg ataaaggctc attgacgtcc agcaaatcca tgcgtgcgcg
     1261 tggcaccatg atgtcagcgg cagtctggtc tgaaacggcc agggcgcctt tgagcatggt
     1321 gtaggcgttg ctatcgatta actcgcgttc gcgcgccgct tcaagaaccg tgaatatgcc
     1381 ttcacggtct tcgggctcac cgcgaaccaa cgagaggatg cggtcaacaa gggatttttt
     1441 tgatttggat ttgtcgcctg gttcttgacc aggctcgcta gggtatggtt ctggcatctt
     1501 ggatgcaatc aagtttcgat agggctagga taacctaaag cgcatgacaa tcgagcgact
     1561 cgggcttgct ggtaccgaca tttttgccgg ttggacgttg atctagctgg cataagggtc
     1621 cgctatgccc cagcgcgcca gca
//
LOCUS       DATBNL010000370         3825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_54387, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000370 DATBNL010000000
VERSION     DATBNL010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3825
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54387"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..569
                     /locus_tag="VIC30_06395"
     CDS             129..569
                     /locus_tag="VIC30_06395"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY7804048.1"
                     /translation="MTIDRSLAPGDVFEVDLPMRWADADMLQHLNNAGYFRFMEEARI
                     RMLAAAGLKADGSVGNVVAHCACDFLRPITYPATVRVKLVVERIGRTSLTQINDIYVV
                     EDLAFGPYARGKTVLVSMHNATGKPTPWTPEALAALGQVCHAAV"
     gene            686..1387
                     /locus_tag="VIC30_06400"
     CDS             686..1387
                     /locus_tag="VIC30_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEY7804049.1"
                     /translation="MEKVYASAAEALAGVVQDGQTIAVGGFGLCGIPEALIAALRDSK
                     VGNLTCISNNAGVDGFGLGMLLESRQVKKMIASYVGENKEFERQYLSGELELEFTPQG
                     TLAEKLRAGGAGIPAFYTKTGVGTIVAEGKETKEFNGKTHILEHSLVPDVSLVKAYMA
                     DRSGNLVFRKTARNFNPNVAMAGKLTVVEVERVVEKGELDPDMVHLPGIYVHRIVIND
                     APEKRIEQRTVRAAQ"
     gene            1402..2055
                     /locus_tag="VIC30_06405"
     CDS             1402..2055
                     /locus_tag="VIC30_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003800902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HEY7804050.1"
                     /translation="MAWTRDEMAARAARELQDGFYVNLGIGLPTLVANYVPEGIEVWL
                     QSENGLLGIGPFPTEDEVDPDMINAGKQTVTTLPGSSIFSSADSFAMIRGGKINLAIL
                     GAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVSRVVILMEHVAKKKDGSEDMKLLP
                     ECTLPLTGVGVVDVIITDLGVMEVTDDGLKLVELAPGVSADEVKAKTLAKLDVSAVS"
     gene            2188..>3825
                     /locus_tag="VIC30_06410"
     CDS             2188..>3825
                     /locus_tag="VIC30_06410"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY7804051.1"
                     /translation="MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLQVTLLKLDPYI
                     NVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFISAKMRKANNFTTGQIYESVLRKE
                     RRGDYLGKTVQVIPHITNEIQEFIIRGATQAWDGATDVAIVEIGGTVGDIESLPFLEA
                     ARQLSLRLGRQQTAFVHLTLVPYIATAGELKTKPTQHSVQKLREIGIIPNALLCRADR
                     PIPDDERAKISMFSNVPLDAVISVWDASSIYEIPGMLHAQGLDGLICEALALNVPEAD
                     LSMWQGLLDAITHPEHEVRIAMVGKYVDLTESYKSLTEALSHAGIHTRSKVTVTYIDS
                     EDIEAQGSQMLAAFDAILVPGGFGKRGTEGKIAAIRYARENQVPYLGICLGMQLAVVE
                     FARDVAGLGGANSTEFDPAAPHPVVALITEWMDREGKVEVRSTSSDLGGTMRKGSQRC
                     PVKPDTLAHRIYGDEVNERHRHRYEVNNVYVPRLEEAGLVISARTPTESLPEIMELPD
                     HPWFMGVQFHPEFTSTPRDGHPLFIGFIRAALAHQAKR"
BASE COUNT          865 a          951 c         1102 g          907 t
ORIGIN      
        1 ccacacgggg ctagattcta ggcgcgtaag acgaccttaa aagccgcagt caactcttaa
       61 gtctatgaca aaacaaaata tagaaccaaa aaacagaacc aaaaaaaaca gaactaaaag
      121 gaagcggcat gacaatcgat cgttctttgg cacccggcga tgtgtttgag gtagatttgc
      181 ccatgcgctg ggcagatgcc gatatgttgc agcatctgaa caacgcgggc tatttccgtt
      241 tcatggaaga ggcacgcatt cgaatgctcg cggccgccgg tttgaaggcc gacggctcag
      301 ttggtaacgt ggttgcccat tgcgcctgtg attttctgcg accgatcacc tatccggcca
      361 ccgttcgggt caagctcgtg gttgagcgca ttggccgcac aagtctgacc caaatcaacg
      421 atatctatgt cgtcgaagac ttagcatttg ggccgtatgc gcgcggcaaa accgtgctgg
      481 tcagtatgca taacgccacg ggcaagccca cgccgtggac gccagaggcg ctagcggcgc
      541 ttgggcaggt gtgccacgct gcggtttgag ccgcgagcga atcaaaatcg tctggatttg
      601 agatgttttg gtgcaactgg caagttacac tctgggtcga actattgcga ataaccgccc
      661 ctcgacaggg caaggagacg tttgaatgga aaaggtctac gctagtgctg cagaggcact
      721 cgcgggcgtt gttcaggacg gccagacgat cgccgttggc ggatttggcc tgtgcggcat
      781 ccccgaggcg ctgattgcag cgctacgcga cagtaaggtt ggtaacttga cttgcattag
      841 taacaacgcc ggtgttgatg gttttggtct gggcatgttg cttgaaagtc gccaggtcaa
      901 gaaaatgatc gcttcttatg tcggtgagaa caaagagttc gagcgccagt acctgtcagg
      961 cgagcttgag cttgaattca ccccccaagg caccttggca gagaagctgc gtgcaggtgg
     1021 cgccggtatt ccggcgttct ataccaagac gggtgtgggc accattgtgg ccgagggcaa
     1081 ggaaaccaaa gagttcaacg gtaagacgca cattttggaa cactcgcttg tacccgatgt
     1141 ctctttggtc aaggcttaca tggccgaccg cagcggcaac ttggtgtttc gtaagacagc
     1201 gcgcaacttc aaccctaacg tggccatggc aggcaaattg accgtggttg aagtcgaacg
     1261 tgtggttgaa aaaggtgaac tcgacccgga tatggtgcac ctgccgggta tttatgttca
     1321 tcgcatcgtc atcaacgacg cccctgaaaa acgcatcgag cagcgcaccg tgcgcgccgc
     1381 gcaataaagg agacaggcat catggcatgg actcgtgacg aaatggccgc ccgtgcggcg
     1441 cgcgaattgc aagacggttt ttatgtgaat ttgggtattg ggttgccaac cttggttgcc
     1501 aactatgttc ccgaaggtat cgaggtttgg ctccagtcag aaaacggtct gttgggtatc
     1561 ggtcctttcc cgactgaaga tgaagttgac ccggacatga tcaatgccgg taagcagaca
     1621 gtcaccacct taccgggttc ttctattttt tcatcggcag actcgtttgc catgattcgg
     1681 ggcggcaaga tcaatctggc tattctgggt gcgatgcagg tctcagaaaa aggtgacctg
     1741 gccaactgga tgattcccgg caagatggtc aaaggcatgg gcggggcaat ggatctggtt
     1801 gccggtgtta gccgggtggt cattctcatg gaacacgtgg ccaagaaaaa agatggctct
     1861 gaagacatga agcttttgcc tgagtgcacg ttgccattga ccggtgttgg tgtggtcgat
     1921 gtcatcatta cggatctggg tgtcatggaa gttactgacg atgggttaaa gctcgtggaa
     1981 cttgcgccag gtgtgagcgc cgatgaagtg aaagccaaaa cgctagccaa gctggacgtc
     2041 tcggcagttt cctaagcctc ctaagccact cgatcgcgcc gcacagcgtg gcgcgatccg
     2101 tttctgcgat cgcaactaga tcgttttggg tcacgagcgc tataatcgaa atttcctgat
     2161 agcgtcattc acatgacgcg cctttttatg accaagtatg tatttgtcac cggcggcgta
     2221 gtgtcatctc tgggtaaagg gatagctgcc gcatctctgg ccgccatcct cgagtcgcgt
     2281 ggcctgcaag tcaccctctt aaaactcgat ccctacatta acgttgatcc tggcaccatg
     2341 agcccgtttc agcacggcga ggtctttgtg accgaagacg gcgctgagac tgatctggat
     2401 ttagggcatt acgagcggtt tatttccgcg aagatgcgca aagccaacaa cttcaccacc
     2461 gggcagattt acgaatcggt cctgcgcaaa gagcgtcgtg gtgactacct tggcaaaacg
     2521 gttcaggtga ttccacatat caccaacgag attcaagagt tcattattcg tggagccacc
     2581 caggcttggg acggtgcgac agacgttgct attgtcgaga ttggcgggac ggtaggcgat
     2641 attgaatcat tgccatttct ggaagccgct cgtcagttga gtttgcggct cgggcggcaa
     2701 caaacggcgt ttgtgcactt aacgcttgtg ccttatatcg ccacagccgg tgagcttaag
     2761 accaaaccga ctcagcactc agtgcaaaaa ctgcgtgaga ttggcattat tcctaacgcc
     2821 ttgctgtgtc gcgctgatcg tccgataccc gatgatgagc gtgccaagat ttcgatgttc
     2881 tccaatgtgc cgttggatgc ggtgatttct gtttgggacg caagttccat ttatgagatc
     2941 cctggcatgt tgcatgctca aggccttgac gggctgattt gtgaggcgct ggcattgaat
     3001 gtgcccgagg cagacctgtc gatgtggcag ggtttgcttg atgctattac ccaccctgag
     3061 catgaagtgc gcattgccat ggtgggcaag tatgtcgacc tcaccgagtc atacaaatcc
     3121 ttgactgaag cgttaagcca tgctgggatt cacacccgat caaaagtcac tgtgacttac
     3181 attgattctg aggacatcga ggcgcaaggc tcgcaaatgc tggctgcatt cgatgcgatc
     3241 ttggtgccag gtggttttgg taagcgcggc accgaaggca agatcgccgc gattcgctat
     3301 gcccgagaaa accaagtgcc atatctcggc atttgccttg gcatgcaatt ggcggttgtt
     3361 gaatttgccc gcgatgttgc cggtcttggt ggtgccaata gtactgagtt tgatcccgcc
     3421 gcaccgcatc cggtggtggc actcatcacc gagtggatgg atcgcgaggg caaggttgag
     3481 gtacgttcga catcgtccga cttagggggc accatgcgta aagggtctca gcgttgcccg
     3541 gttaaacccg atacgctggc acaccgaatc tatggggatg aggtcaatga acgccatcgt
     3601 caccgctatg aggttaacaa cgtgtacgtg ccgcgtttag aagaggcagg gcttgttatc
     3661 agtgctcgca ccccaactga gagtctgccc gagattatgg agttgcctga tcatccgtgg
     3721 ttcatgggcg ttcagttcca tcccgagttc acctcaacgc cgcgagatgg ccatcctttg
     3781 tttattgggt ttattcgtgc tgcattggcg catcaggcta aacgc
//
LOCUS       DATBNL010000371         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154052, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000371 DATBNL010000000
VERSION     DATBNL010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154052"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VIC30_06415"
     CDS             <1..542
                     /locus_tag="VIC30_06415"
                     /inference="COORDINATES: protein motif:HMM:NF024230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEY7804052.1"
                     /translation="ICAGLLLGLSLMDTSLASGPATSSTPLWLDVLCAGIAVSAFGAF
                     FSLPWRLLAAPVIVGMLCHGSRWVVIEQGAGIATGALVACLIAGSIMTILSHRLKLPF
                     AALAFASVVSMMPGIFVFRLADGLISVYVAGKDASLAMLTAVFADATATILIILVMTF
                     GLIFPKMLIEGISASVRKS"
     gene            complement(1193..1771)
                     /locus_tag="VIC30_06420"
     CDS             complement(1193..1771)
                     /locus_tag="VIC30_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012366667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY7804053.1"
                     /translation="MSVADLLFPNQYRRKVLALLTMNPNISIHLRELARLTKTSPGTL
                     KKELDLLATSGLVKSKTQGNQVQFCINTDHPIYPELLALIRKTIGLHDVLADGLQPLV
                     NQLEVAFVFGAVAKETETSESDIDVLVIGDVTFGQINNALYDAQTVLSRDINPKVMSR
                     QEWIRKRREDNAFVKDIVSKPKIFIIGSEHDL"
BASE COUNT          484 a          507 c          518 g          530 t
ORIGIN      
        1 taatttgcgc gggcttgtta ttgggcctaa gcctcatgga cacttccttg gcttcaggcc
       61 cagccacttc aagcacgcca ctttggctgg acgtgctttg tgccggtatc gctgtatcgg
      121 catttggtgc tttcttctcc ctgccctggc gcttgctggc ggctcctgtg atcgtgggca
      181 tgttgtgtca tggcagtcga tgggtggtca tcgagcaggg agcgggcatt gccactggcg
      241 cactggtcgc gtgtctaatt gcaggctcga tcatgacgat cctgtcacac cgattgaaac
      301 ttccctttgc ggcgctagcc tttgcttcgg ttgtgtcgat gatgccgggc atttttgtat
      361 ttcgcttagc tgatggtctg atcagcgtat acgtagccgg caaagatgct tctttggcca
      421 tgctgacggc ggtattcgcg gatgcgaccg ccacgatact gattattctg gtgatgacat
      481 tcggactgat atttcccaaa atgttgattg agggtatttc ggccagcgtt cgaaagtctt
      541 aaaagtcgtc gatttgaaca accacggact taggcaaaag tccctcgatg tcaggagcac
      601 gaatgctacg tggaaccgcc ccacccttca gagcccagct ctacaaccat gcggtgtctt
      661 gcggtgtctt taaagtgaac caccaaaaat gaactaccat gagaatgtgc ctatgtctca
      721 taggtaagaa tccataacgc aactggagct tgacatgaca gaggatcctc gctgctgcgg
      781 aagcggcacc tgtattattg atccagaggg ccgctgttgg tgcggtcaac aatgggacgg
      841 cgataagatg tgcttccctt ctcaaacgac aagtggctca gatggtgata ccggtcagga
      901 agatgagacg ggctcatcag cgcgcaatga gcgtagcgcc ggctaggtcg gattgagccg
      961 tccaggatgc gcacggtttg cacctgaaca cttagcctgt ggaccaaaca ctgcagggtc
     1021 gtttaatggt ggcttggatg tcgatgttcg atatccctgc tttaacaaag ccgcgtcagc
     1081 aaccggtcgc tgtgtacgca caatcacaac gcgtctcggc actgttccct ttgcgcaagg
     1141 cgtcttgcaa ccggctgcga gctgtccaac tttttctagg ttcagtaagt tttcagaggt
     1201 catgctcact accgatgata aagatctttg gctttgaaac gatgtctttt acgaatgcgt
     1261 tgtcttctcg ccgtttgcgt atccattcct ggcgcgacat gaccttaggg ttgatgtctc
     1321 gagacaagac agtctgcgca tcataaagag cgttgttgat ttgcccgaat gtgacatcac
     1381 caatgaccaa aacatcgata tcgctttcag aggtctcggt ttctttggcc acggccccaa
     1441 aaacgaatgc cacttccaac tgattgacaa gtggttgcaa cccatctgcc aggacgtcat
     1501 gcaaacctat ggttttacga atcagcgcga gcaattctgg gtaaatcggg tgatcggtat
     1561 tgatgcaaaa ctgaacttga ttgccctgcg tttttgactt cactaaacct gaggtggcca
     1621 acaagtcgag ctccttcttc aaagtgccag gggaggtttt cgttaggcga gccagctcac
     1681 gcagatgaat cgagatgttt ggattcattg tgagcaacgc cagcactttg cgtcgatatt
     1741 gattcggaaa gagtaggtca gcgacagaca ttttgtttct taaacgaaaa cgatcgtttc
     1801 ttaattgaaa acaattttat accttctagg caagccccct ctatcgcaaa agacggctgt
     1861 tttttgcgtg ttctggctcc aagcagacac tgtgcgctct gatgcaacaa accatcatgc
     1921 cagtaactgg tcaaacagag aaataaagca aacaaaaacc gcgtcggaac aaacaccata
     1981 gaagacagaa ctgaaaagca ggactactta ttccacttac ctatcacagc acttagcca
//
LOCUS       DATBNL010000372         1818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_173572, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000372 DATBNL010000000
VERSION     DATBNL010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173572"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VIC30_06425"
     CDS             <1..436
                     /locus_tag="VIC30_06425"
                     /inference="COORDINATES: protein motif:HMM:NF017985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HEY7804054.1"
                     /translation="KIGQSWIEALADPMSHYFTRITYGKREVPTAPAQRVRVDWDTAT
                     EQMSLRFELPLLEPLAPADKPLVVSVADPTFYVAYSFEADDAISMVAAPERCDANYQR
                     PERLDMETAQRLAAIGPDVTELPDDLMAVTQTLQHKVVLTCQ"
     gene            490..1527
                     /locus_tag="VIC30_06430"
     CDS             490..1527
                     /locus_tag="VIC30_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HEY7804055.1"
                     /translation="MLLLVSASVLAQSPHPFAVPEQRLPTVSGGWLAQWTGQIAIWQS
                     EFYRELTGAVRAWKADGWQAWGLLGLSFAYGVFHALGPGHGKAILSAYVLANRETVRN
                     GAILAFASSLVQALVAIAMVGIAAGILNVTGAVLNEVTAWLELGAYALLTGLGAWLVF
                     KHIVKPIGKRLSKLGHRHSHGDPHGNPHGHSHGHNHDHHDHDHDHDHNHSDHAEADAC
                     GCGHVHMPDPSQIAGKLNWRKAWGAIVAIGLRPCSGAILVLVFALSQQFFVAGIAAAL
                     AMGLGTGLTVATLAMMSLGVGRMAEAAGGGQGRPWGQIIGNALQGAASIAVLLFGLLL
                     FSAAWQYGALN"
     gene            complement(1592..>1818)
                     /locus_tag="VIC30_06435"
     CDS             complement(1592..>1818)
                     /locus_tag="VIC30_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018904981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEY7804056.1"
                     /translation="IARLIREIKQDNIRALFVENISDPRLLKRVAEETGTRIGGELYS
                     GALSAPGTEADTYLKMFAYNADLIWHALKP"
BASE COUNT          390 a          525 c          516 g          387 t
ORIGIN      
        1 caaaataggt caatcctgga tagaagccct tgccgacccc atgtcgcact acttcacccg
       61 cattacctac ggcaagcgag aagtacctac tgccccggcg caacgggtgc gggtcgactg
      121 ggatacagca acagaacaaa tgtcgctacg gtttgagttg ccgttacttg aacctctggc
      181 gccagctgac aagccgctgg tggtgtcagt agcagacccc accttctatg tcgcctacag
      241 ttttgaggca gatgacgcga tttccatggt ggccgcaccc gagcgctgtg atgccaacta
      301 tcaacgcccc gaacgtctgg acatggaaac cgcccaacgt ctggctgcca tcggacccga
      361 tgtcaccgaa ctaccagatg acttgatggc agtgactcaa accttgcaac acaaggtggt
      421 gctcacgtgc cagtaagacc gtacgccgca ggccacagca aacctgtcct gctgtgggcg
      481 gtggctctca tgctgctgct cgtcagtgcc tcggtactgg cgcagtcccc ccacccgttt
      541 gccgtgcctg agcaacgcct gccgactgtt tctggcggat ggctggcgca atggactggg
      601 cagatagcaa tctggcaatc cgagttctac cgcgaactca ccggcgcagt gcgcgcgtgg
      661 aaagccgatg gatggcaagc atggggccta ctcggactgt cattcgctta cggtgtgttt
      721 catgcattgg gccccgggca cggcaaggca atcttgtcag cttatgtgct ggctaatcga
      781 gaaaccgtgc gcaatggagc aatcttggcg tttgcctcat ctttggtgca agcgcttgtg
      841 gccattgcga tggtgggcat tgccgcaggt attctgaacg tcactggtgc agtgctaaat
      901 gaggtgaccg cgtggctaga gctcggtgcc tatgcattac tcacagggtt aggtgcgtgg
      961 ctggtcttta agcacatcgt taagcccatc ggcaagcgac tatcaaaact cggtcacaga
     1021 cactcgcacg gagacccgca cggaaacccg cacgggcatt cacacggtca taatcatgac
     1081 caccacgatc acgatcacga tcacgaccac aaccacagcg atcatgcaga ggctgatgcg
     1141 tgcgggtgcg gtcatgtgca catgcctgac ccgagtcaga tcgctggcaa actgaattgg
     1201 cgcaaggcct ggggtgcaat tgtggcgatc ggtttgcgac cctgctcggg cgctattttg
     1261 gtgttggtgt ttgccttgtc gcagcagttt tttgtggcgg gtattgctgc agcacttgca
     1321 atgggtttag gcacaggctt aacagtcgcg acgctagcca tgatgtcatt gggcgtgggg
     1381 cggatggctg aggccgccgg tggcggtcaa ggccgcccat ggggccaaat catcggcaac
     1441 gccttgcaag gcgccgcctc aatcgctgtg ctgctgtttg gcctgttgct ctttagcgcg
     1501 gcctggcaat acggggccct gaactaagcg aagcctcgca agccgataca caacgcacac
     1561 cacacacaaa cctcacaaac ccaacaaacc atcagggttt gagcgcatgc cagatcaaat
     1621 cggcgttgta ggcgaacatc ttcagatacg tgtctgcctc ggtacccggt gcagacaaag
     1681 cgcctgagta caactcacca ccaatgcgcg taccagtctc ctcggcaacc cgctttagca
     1741 gtcggggatc actgatgttt tcaacaaaaa gcgcgcggat attgtcttgc ttgatttcac
     1801 ggatcagtct cgcaatgt
//
LOCUS       DATBNL010000373         2587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_173615, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000373 DATBNL010000000
VERSION     DATBNL010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173615"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VIC30_06440"
     CDS             complement(<1..377)
                     /locus_tag="VIC30_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7804057.1"
                     /translation="MLVLKNLTKQYGAKDVALKDVSLTIGQGEIVGLIGPSGAGKSTL
                     IRCINRLVEPTSGSILLDDVDLASLSTGELRRQRRRIGMIFQEYALVERLTVMENVLS
                     GRLGYVSFWRSYLRKFPADDIRNA"
     gene            complement(562..1512)
                     /gene="phnD"
                     /locus_tag="VIC30_06445"
     CDS             complement(562..1512)
                     /gene="phnD"
                     /locus_tag="VIC30_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0043168 - anion binding [Evidence IEA];
                     GO_function: GO:0043225 - ATPase-coupled inorganic anion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY7804058.1"
                     /translation="MRKFTMGVLAASLMFSAGASAQFSLDSRYTDNDGDLTADTPTDV
                     SKQIDPSTLIFAYTPVEDPAVYADVWSEFIDHMSETTGKKVQFFPVQSNAAQIEAMRS
                     GRLHVAGFNTGSNPLAVACAGFKPFAMMARADDSFGYEMEIISFPGSGIEKVEDIKGK
                     QLAFTSQTSNSGFKAPSAILMADFNMEPGRDFEAVFSGKHDNSILGVANKDYQAASIA
                     NSVRKRMQARDVVKPEQLNIIYTSQTFPTTGYGVVYNLKPELQDKIRESFFTFDWNGT
                     KLQAEFEKSGEAKFIPITFQKDWDVIRKIDAANGVSYACQ"
     gene            1874..>2587
                     /locus_tag="VIC30_06450"
     CDS             1874..>2587
                     /locus_tag="VIC30_06450"
                     /inference="COORDINATES: protein motif:HMM:NF024734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HEY7804059.1"
                     /translation="MTVKYNNISKTLGPRVAQVFTELHERRRLVFTIKDVTAITGLSN
                     SAASNLIARLSRHGLVTRLKAGLYNLVPFELGWTNHHVENPYLIAAELAGSAPHFLSH
                     GTAFELHRMVTQPNLTIYLSCTQERRMQSVGGYNFHFLHIRPEQATGLTKHWVDKERF
                     VMMSDLEHTVVDGLKHPGLVGGITEVAKGIWMKHEKLNINQLIDYAKLFGNGATLRRL
                     GFILELYQLANVEQLMYLRG"
BASE COUNT          686 a          630 c          659 g          612 t
ORIGIN      
        1 gcattgcgaa tatcgtcagc gggaaattta cgtaggtagg aacgccagaa agaaacataa
       61 ccaagccgcc cggagagcac gttctccata acggtcaatc gttcgaccaa cgcatattcc
      121 tggaaaatca tgccaatacg gcggcgctgc cgtcgcaact cacctgtgga caaagacgct
      181 agatccacat cgtctaacaa gatactgccg ctcgtgggtt caaccaaccg gttgatgcag
      241 cgaatcaagg ttgacttgcc cgcccccgag ggaccaatga gaccgacaat ctcaccttga
      301 ccaatggtca gtgacacgtc tttcaatgcc acgtctttgg caccgtactg cttggtcagg
      361 ttcttaagta cgagcattgg taaagtccaa ataaaatcaa tacccactac aggcgctgct
      421 agcagcgcct gtagtgggtg caacaaatgt aaaggttgca acagatactt cagttatgta
      481 tcgatacacg acacctgctg gtttgatcga gagttcggac gggaactggg tcggggatca
      541 aaccagcagg tctagattgc tttactggca ggcgtaagac accccgttgg ccgcatcaat
      601 cttgcggatc acgtcccaat ctttctggaa ggtgattggg atgaacttgg cttcaccgct
      661 tttttcaaat tcggcttgca gtttggtgcc attccaatca aacgtgaaga acgactcacg
      721 gatcttgtct tgcaactcag gctttaggtt gtagaccacg ccgtaacctg tcgtggggaa
      781 ggtctgcgag gtgtagatga tgttcagttg ctcgggcttg accacatcac gagcttgcat
      841 gcgcttgcgc accgagttgg cgattgaggc agcttgatag tctttgttgg caacgcctag
      901 gatggagttg tcgtgcttgc ctgaaaacac agcctcaaag tcacgaccgg gttccatgtt
      961 gaagtcagcc atcagaatcg ctgacggggc tttgaaacca gagtttgaag tctgcgaggt
     1021 gaaagcgagt tgcttaccct tgatgtcttc gactttctca atgccagagc cggggaaaga
     1081 aatgatctcc atttcgtaac caaagctgtc gtcagcacgc gccatcatgg caaaaggctt
     1141 aaagcctgcg caagccacag ccaaggggtt tgagccagta ttgaagccgg ccacatgcaa
     1201 gcgacctgaa cgcatggctt cgatctgagc agcattggac tgcacaggga agaactgaac
     1261 cttcttgccg gttgtctcgg acatgtgatc gatgaactca gaccagacat cggcataaac
     1321 cgctgggtct tcaactggcg tgtaagcaaa aatcagcgtg gaaggatcaa tctgcttaga
     1381 aacatcagtg ggggtatcgg ccgttaagtc accgtcattg tcggtgtaac gggaatccag
     1441 tgaaaactgg gcactggcgc cggctgagaa catcagggat gcagcaagca cgcccatggt
     1501 gaatttacgc atgtcaaaac tcctggttaa ggtcgaagca tcgaagacac catcatgatc
     1561 tcagtcgcga tcacgtgatg tatctgtctt gtaaaaacat gcgaacagta gggtaagaat
     1621 gtgacaggta tgtgtcagcc cggcacccaa gaggcataca gatagtagga accaatcagt
     1681 agcactatgc agtcagtctg tgacccggcc tgtttgccga gttgcgcact tggatgaggt
     1741 acttggataa gctcgggcgc ttaatgaaaa ttcaatgcag atatctgcat gactaatctg
     1801 acatctgctc aaatcaatac tatcggatat atgttatatt ttactgacaa taatcatcta
     1861 aatttaatga aaattgacag taaagtacaa caatatttct aaaaccctag ggccaagagt
     1921 cgctcaggtt tttactgagc tccatgagcg ccgacggctc gtgttcacga tcaaggatgt
     1981 gactgcgatc acaggcttgt cgaattcggc tgccagcaac ttgatcgcca ggctttcacg
     2041 tcatggtctt gtcacccgtt taaaagctgg cctttacaac ttggtgccat ttgagttggg
     2101 ctggaccaat caccatgtag aaaaccccta tttgatcgct gccgagctag ccggatctgc
     2161 tcctcatttt ctatcgcacg gcacggcgtt tgagctgcat aggatggtga cgcaacccaa
     2221 tctcaccatt tacctgtcgt gcacacaaga gcggcggatg cagagtgtgg gcggatacaa
     2281 ctttcacttt ttacacattc gtcctgagca agcgacggga ttaaccaaac attgggtgga
     2341 caaagagcga ttcgtcatga tgagtgacct ggagcacacg gttgtcgacg gtctcaaaca
     2401 cccaggattg gttggtggca tcactgaagt tgccaaaggc atctggatga aacatgaaaa
     2461 actgaacata aaccaactga ttgactacgc aaaacttttc ggcaacggag cgacactcag
     2521 gcgtctaggc ttcatactcg aactctatca gctggcaaat gtcgagcaac tcatgtatct
     2581 tcgcggg
//
LOCUS       DATBNL010000374         7648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_64403, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000374 DATBNL010000000
VERSION     DATBNL010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7648
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64403"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VIC30_06455"
     CDS             <1..646
                     /locus_tag="VIC30_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013122385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY7804060.1"
                     /translation="QVSAEQTATVKTTRQRIYLYKRYERFWHWSQALLIITMIITGFE
                     IHGTYTLLGFEPAVRLHTIAAWALVVLWTFTLFWHLTTSEWEQYIPTHKRLGAVALYY
                     VWGIFKGAPHPYKKTVQRKHNPLQRLTYLGLLTVILPTVWVSGILYLFHAQWSVVGLD
                     QWLSLTWVAGVHVAAAFLVLIFLIVHVYLTTTGHTPTAHIKTMVTGWEEVDDTH"
     gene            complement(657..2327)
                     /locus_tag="VIC30_06460"
     CDS             complement(657..2327)
                     /locus_tag="VIC30_06460"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7804061.1"
                     /translation="MSTWGYLLRLYRPRSGWLLVAFLSLTVTWLSAAALLAVSGWFIT
                     ACAMAGLGMIANLNIFTPSTAIRGLALLRTIGRYVERVVGHEAILRILADLRVRAFSA
                     VAQRPANQTDTARHADVVNRLTADVDTLDGVPLRVIGPLFAAVLTWVTVVIIGGIWGG
                     TTVALVIGIGGTLTFAAAIWGARAGQAQGIAVIQARSEQRVALTDHLGGLAELLAFKQ
                     TRASDQYLAQLDAKQTQRLMHQERFASIAEHAVQSLTAAMTLVVLGLTWPVLDAPTVT
                     LLALMTLGMNEALGTLPGAFWRVGESEQAARRLMQLESTADQAPAAEANPKQTVGTQA
                     HSSRTIDIVDLRCLRQPNPDRSLNHTLQPGRPLVIHGASGTGKTSLLATMAGELLAQT
                     GEVRSNGTNLLALNDHDRYRHIGFLSQNDQLLDLSIREFLSLGLDNGSNDSNDSDNSD
                     EMLRAVLQQVDLLETLENTTEGFNYRLGVSGSRISGGQARRLQLAALLLREPELVLLD
                     EPFRGLQPELVQTIIARITPWLAQRCCVVVTHDPRALPERWPRQAWPL"
     gene            complement(2324..4042)
                     /gene="cydD"
                     /locus_tag="VIC30_06465"
     CDS             complement(2324..4042)
                     /gene="cydD"
                     /locus_tag="VIC30_06465"
                     /inference="COORDINATES: protein motif:HMM:TIGR02857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055051 - ATP-binding cassette (ABC)
                     transporter complex, integrated substrate binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033230 - ABC-type cysteine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0033228 - cysteine export across plasma
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydD"
                     /protein_id="HEY7804062.1"
                     /translation="MDTTNPSSTSVEPRPASDTAPASFLLHLRNQGKATLRQLQITAV
                     VSTIGIIAFSAAVALIVSAAMNSQTPAAELWLVGLLGLALRLGANLWRDHLAHALSAR
                     LRADLRARLLAQANALGPHQLARQGNTAWWAHQMLEQVDALHGYIARYLPARQAAMVV
                     PLAIIITTLAVDWLAGLLILLATPIIPIFMVLIGWGTEAVHRSQQEQQASLSAHLMDR
                     LQALPWLRRMGAVEQAQASVKDAAQTYRQVSMRVLRVAFLSSATLEFFSAVSIGLMAI
                     YIGFALLGLISYGPADQMTLAMGLFMLMLAPECFLPLRQLAQAHHDMNAAKASADVLQ
                     SLLPEPGMATLQPGTKIEPKIEPCADPEIAMHLQAIELQWPDTESAVLNNVELTVPRG
                     QIIGISGDSGQGKSTLLGVMAGFIKPDSGRVRRDTHWAWLAQRPHLFHATLRENLLIG
                     CSAPVDDDTLITALADVGLALPHELLPQGLDTAIGELNQGVSGGQAQRIALCRSILSG
                     ATLWLLDEPTAALDADTRNALLDTIMVRARAQRVTMVMASHDQEALSRCDQVFTVGHG
                     RLERRR"
     gene            complement(4029..5030)
                     /gene="cydB"
                     /locus_tag="VIC30_06470"
     CDS             complement(4029..5030)
                     /gene="cydB"
                     /locus_tag="VIC30_06470"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011617058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEY7804063.1"
                     /translation="MMYDFTYLWIGIIGFGVLMYVLADGFDLGVGILFPFAKDESERD
                     IMMNTVAPVWDGNETWLILGGAGLLAAFPLVYSVILPALYIGVFLLLAGLIFRGVAFE
                     FRFKASPERKHFWNIAFCGGSLVATFAQGAVVGAYIQGFETENFRYVGGAFDWLTPFT
                     VMTGLGMVVGYCLLGATWLVLKTEGELQTRVRGWAHKLLVAMMGFFVVVSLWTPMIDS
                     YVNDRWFGNVSWLWVLPALTVIMAGLIWRWLDKQHDALPFIGTIALFALFYGGLLFSK
                     WPYVVPPNYTFHDAASAPESQLFLLVGFLFVVPFVLMYTAWTYYVFRGKVTNASGYH"
     gene            complement(5052..6464)
                     /locus_tag="VIC30_06475"
     CDS             complement(5052..6464)
                     /locus_tag="VIC30_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEY7804064.1"
                     /translation="MELDPLFLSRLQFAFVVSFHAIFPVFTIGLASYIAVLETLAFRT
                     KSPHWVRLSAFWTKIFAVVFGMGVVSGLVMAFQFGTNWSNFAYTASNFLGPVLAYEVV
                     TAFFLEAAFLGVLLFGRHKVPPGLHLLAAYMVAIGTFISSFWILSANSWMQTPSGVEM
                     RDGMIHVTSWFEAIFNPSFPYRFAHMGLASFLTGGFVVAGVSALYILRGHAVETAQKA
                     LKMTIVLLAVIAPLQLFVGDAHGLNTLEHQPAKVAAMEGAWETESGLPLLLFAIPDQD
                     AQTNHFEIGIPKLASLILTHDLNGTVQGLDAFPRAEQPPVAPVFWSFRVMVAIGMLMI
                     AVGLWGAWLVWRGKLLESRRYLRLLTFMIPAPFVAVLAGWFVTEIGRQPYLIYGMLTA
                     EQSLTPSLQGWMAALTLAGYVAVYAVVFTAGVHFLRKLINKGISEDDPVGSDTGRPKR
                     PMSAADSTAQAGSAPSFFQA"
     gene            complement(6621..>7648)
                     /locus_tag="VIC30_06480"
     CDS             complement(6621..>7648)
                     /locus_tag="VIC30_06480"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804065.1"
                     /translation="ELAALKPDLETKIRSVRQWANTEHHRLQHLITQRQHQGFYRDGH
                     GDLHLANLVRFEGHVMAFDALEFNADLRQIDIMGDIAFTFMDLLAFGRADLAWTLMNA
                     WCEHTGDYAGLRLLRYYTLYRAVVRAKVAALSGNTSNNQRTLQRYWSLVGQLIAAPNP
                     PRLVLLTGLSGSGKSTVAAELATHLSAIRLRADVIRKQLFTDEIKHPDRLYSAKATRA
                     TYAELARLTKILLAQNMTVIVDATFLSQTHVDRFDKLAKHFSIKIHILACHAPVPELR
                     RRIDHRAKLGGDPSDATLAVLEQQLASQVSRPVQWPVPQNKLNTYRSIADMNRHIAKF
                     AQLVLKS"
BASE COUNT         1799 a         2100 c         2160 g         1589 t
ORIGIN      
        1 tcaagtgtct gcagagcaga ccgcgactgt aaaaaccaca aggcagcgca tctatttgta
       61 caagcgttat gaacgatttt ggcactggtc acaggcgttg ctgatcatca ccatgatcat
      121 cactggcttt gaaatccatg gcacctatac tttgttgggg tttgagcctg ccgtgcggtt
      181 gcataccatc gcggcttggg cgctggtggt gttgtggacc ttcacgctgt tttggcattt
      241 gaccacgagc gaatgggagc aatacattcc tacccacaaa cggctcgggg cggtggcgct
      301 ttactatgtc tggggcattt ttaaaggtgc accacaccca tataagaaaa ccgtgcaacg
      361 caaacataat ccgttgcaac gtctgacgta tttagggctg ttgaccgtga tcctgcccac
      421 agtgtgggtc agtggcattt tgtacctgtt tcacgcacaa tggtcggtgg tgggtttgga
      481 ccaatggtta tccttgacgt gggtcgcagg cgtgcatgtg gcggcagcat ttttggtatt
      541 gatctttctg attgttcacg tgtacttgac cacgacgggt catacgccca ccgctcacat
      601 taaaaccatg gtgaccggtt gggaagaggt tgatgatact cactagcttt gccggttcac
      661 aacggccacg cctgacgggg ccagcgctcg ggcaatgcgc gagggtcgtg ggtaaccacc
      721 acgcagcagc gttgcgccaa ccacggggtg atgcgtgcga tgatggtttg caccaattcg
      781 ggctgcagcc cacggaaagg ctcatcgagt aataccaact ccggttcgcg caacaacagg
      841 gctgcgagct gcaggcgtct ggcttggcca ccggagatgc gactgccact gacacccaag
      901 cggtaattga aaccttctgt ggtgttctcc agcgtttcaa gcaagtcgac ttgctgtagt
      961 actgcgcgca gcatttcgtc gctgttgtcg ctgtcgttgc tgtcgttgct gccattgtct
     1021 aggccgagcg acaagaattc acggatcgag aggtcgagca actgatcgtt ctgacttaaa
     1081 aacccgatgt gacggtagcg gtcgtggtca tttaaggcca acaggttggt gccgttgctg
     1141 cgaacctcgc ccgtttgggc taatagctcg ccggccatgg tggccaagag gctggtctta
     1201 ccggtgccac tcgccccgtg aatcaccagc ggtcgccctg gttgcaaggt gtggtttaga
     1261 cttcgatctg ggttgggctg tcgcagacag cgcaagtcga cgatgtcaat ggtgcgcgag
     1321 ctgtgggctt gcgtgccaac ggtctgtttg gggtttgcct cagcggcggg ggcttggtca
     1381 gcggtggatt caagttgcat gagtcggcgt gctgcctgct cagactctcc cacgcgccag
     1441 aatgcacctg gcagcgtgcc cagtgcttcg ttcatgccca gggtcatgag tgccagtaag
     1501 gtcacggtgg gcgcatcgag gactggccat gttagaccga gcaccaccaa ggtcatggca
     1561 gcggtcaaac tttgtacggc gtgttcggca atgctggcaa atcgttcttg gtgcatcagg
     1621 cgctgcgttt gcttagcgtc aagctgcgct aagtactggt cagaggcacg ggtctgctta
     1681 aacgccaaga gttcagccaa gccgccaaga tgatcggtta aggccacacg ttgttcgctg
     1741 cgcgcctgga tcacggcgat gccttgtgcc tgcccggcgc gcgcacccca gatcgctgca
     1801 gcaaatgtca aggtaccacc gataccaatg accagtgcca ccgtcgtgcc gccccagata
     1861 ccgccaatga tcacaaccgt gacccaggtc aggacagccg caaacaaagg accgatgact
     1921 ctcaatggca cgccatcaag ggtgtctaca tcggcggtta agcgattgac cacatcggca
     1981 tggcgggccg tgtcggtttg attagccggc cgttgtgcca cggcactaaa ggcacgcaca
     2041 cgcagatcag ccagaatacg caagatggct tcgtgtccca cgacccgttc aacgtatcga
     2101 ccgatggtgc gcaatagtgc caaaccgcga atcgcggttg atggcgtaaa gatatttaga
     2161 tttgcaatca tgccaagacc ggccatggcg caagccgtga tgaaccagcc agataccgca
     2221 agcaaggctg ccgctgacag ccacgtgaca gtcaaactga gaaaggcaac gagcaaccaa
     2281 cctgatctag gtcgatacag ccttagcaga tatccccatg tgctcatcgc cgccgctcca
     2341 agcgcccgtg acccacggtg aaaacttggt cacaacgcga taacgcctct tggtcgtggc
     2401 tggccatgac catggtgact cgttgggcac gtgcgcgcac catgatcgta tcgagcaacg
     2461 cgttgcgggt atcggcatcg agtgcggcgg tgggttcatc gagtaaccac agcgttgcgc
     2521 cactgagaat cgagcgacac aaggcaatgc gctgggcttg cccgccagag accccttggt
     2581 tgagctcacc gatggcggta tcaaggcctt gcggcagcag ttcgtgcggc agtgccaatc
     2641 ccacatcggc cagtgctgtg attaacgtgt catcgtcaac cggcgccgag cagcctatta
     2701 aaaggttctc gcgcagcgtg gcgtgaaaca ggtgcgggcg ttgtgccagc cacgcccaat
     2761 gcgtgtcgcg acgcacgcgc ccactatcag gcttgataaa acccgccatt acaccaagca
     2821 aagtggactt gccttggccg ctgtcaccgg agatgccaat gatttgcccg cgtggcacgg
     2881 tcagttcaac attgtttaat accgctgact cggtatcggg ccactgcagt tcgatggcct
     2941 gcaagtgcat agcgatctca ggatctgcac atggttctat tttcggctcg atcttggttc
     3001 cgggttgtag ggtggccatg cccggctctg gcagtaggct ctgcaagaca tcggcactgg
     3061 ctttggcggc attcatgtcg tgatgggctt gggccaattg gcgcaaaggc aaaaaacatt
     3121 ccggtgccag catcagcatg aatagtccca tggctagcgt catctgatcg gcaggcccgt
     3181 agcttatgag cccaagcaac gcaaagccga tgtagatggc catcaacccg atggacacgg
     3241 cgctaaagaa ctctagcgtg gctgaagaca aaaacgccac acgcagcacc cgcatggaga
     3301 cttggcggta ggtctgtgcg gcgtccttta cgctggcttg tgcctgttcg acagcaccca
     3361 tgcgtctaag ccaaggcagt gcctgtagtc ggtccatgag atgggctgac agcgaggcct
     3421 gttgctcttg ttgcgagcga tgcacggcct cagtgcccca gccaataaga accataaaga
     3481 tcggaatgat gggcgtggcc aacaaaatca gtagccccgc aagccagtcc acggccagtg
     3541 tggtgatgat gatagccaag gggaccacca tggcggcttg ccgtgcaggt aagtagcgtg
     3601 cgatatagcc gtgcaacgca tcgacttgct cgagcatctg atgcgcccac caagccgtat
     3661 tgccttgtcg tgccagttgg tgaggtccca gtgcattggc ttgcgccaac agtcgtgcgc
     3721 gtaagtcggc tcttagtctg gctgacaaag cgtgagccag atggtcgcgc cacaagttgg
     3781 ctcctaagcg caacgccagg cctagcagtc caaccagcca gagttcggcg gccggtgtct
     3841 ggctattcat ggccgcactg acaatcaggg ccacggccgc gctaaaggcg atgatgccaa
     3901 tggttgagac cactgcggtg atttgcagtt ggcgcaacgt ggccttgccc tgattgcgca
     3961 agtgcaacag aaaagaggcc ggcgctgtgt cggacgccgg cctcggttcg acggacgtgg
     4021 agcttgggtt agtggtatcc actggcgttg gttactttgc ctctaaaaac gtaatacgtc
     4081 catgctgtat acatcaagac aaaggggacc acaaacaaaa acccgaccaa gagaaacaat
     4141 tggctctctg gcgctgaagc tgcatcatga aacgtgtagt ttggtggtac cacatacggc
     4201 cacttgctaa agagcaagcc gccataaaag agcgcaaata aagcaatcgt gccaataaag
     4261 ggcagggcat cgtgttgttt gtctagccag cgccaaataa gaccagccat tatgactgtg
     4321 agcgcaggca agacccacaa ccaggaaaca ttgccaaacc agcgatcatt gacataactg
     4381 tcgatcatcg gtgtccaaag gctcaccact acaaaaaagc ccatcatggc cactagcaac
     4441 ttgtgagccc atccacgcac ccgagtttgc agctcgcctt cggtttttag aaccaaccaa
     4501 gtggcaccaa gcaggcagta accgaccacc atgcccagac ccgtcatgac agtaaagggt
     4561 gttaaccagt caaacgcccc accaacatag cggaagttct cagtctcaaa cccctggatg
     4621 taggcaccga ccacggcacc ttgggcaaag gtcgctacca gcgagccacc acaaaacgcg
     4681 atattccaaa agtgcttgcg ctcgggcgat gctttaaacc gaaactcaaa cgccacccca
     4741 cggaaaatca acccagctag caacaaaaac acaccgatat atagtgccgg caagatgacg
     4801 ctatagacca acggaaacgc tgctagcaga ccggcgccgc caaggatcaa ccaggtttcg
     4861 ttgccatccc agaccggtgc cacggtgttc atcatgatgt cgcgttcaga ctcgtccttg
     4921 gcaaagggga aaagtatccc cacgcctagg tcaaagccat cggccagcac atacatcagc
     4981 acaccaaacc cgataatgcc aatccacaga tacgtgaagt catacatgat cgtctccttt
     5041 acgttcgtgg tttaagcctg aaaaaatgac ggggcgctgc cagcttgtgc cgttgagtcg
     5101 gccgctgaca tggggcgttt gggtcgaccg gtatcactgc caacaggatc gtcttcgctg
     5161 atgcctttgt tgatgagttt gcgtaaaaaa tgcaccccgg cggtaaacac cacggcatag
     5221 acggcgacgt agcctgcgag cgtgagcgca gccatccagc cctgcaggct tggtgtgagc
     5281 gactgctcag cggtcaacat gccgtaaatc aaatacggct gacgcccaat ctcggtcaca
     5341 aaccaaccgg ctagtaccgc cacaaatggt gcggggatca tgaaggttaa caaccgcagg
     5401 taacggcgcg attccaataa cttgccgcgc cacacgagcc atgcacccca gagaccaacc
     5461 gcgatcatca gcatgccaat agccaccatg accctaaaac tccagaacac cggtgccacc
     5521 ggcggttgtt cggcacgcgg gaacgcgtcg agtccttgca ccgtaccatt tagatcgtgc
     5581 gtcaggatca ggctggcaag cttggggatg ccgatttcaa aatgattggt ttgtgcatcc
     5641 tgatcgggta tggcgaacag caacagcggc agccccgact ctgtttccca agcgccttcc
     5701 atggctgcaa ctttggcggg ttgatgctca agcgtgttca ggccgtgggc atcaccaaca
     5761 aagagttgca gcggtgcgat cacagccagc aacacgatgg tcatcttgag cgctttttgt
     5821 gcggtctcaa cggcatgacc gcgcaggatg tagagcgctg acacaccggc cacaacaaag
     5881 ccacccgtca gaaacgatgc taggcccatg tgtgcaaagc ggtaagggaa tgacggatta
     5941 aagatggcct caaaccaact cgtgacatga atcatgccat cgcgcatttc aacgccggaa
     6001 ggcgtttgca tccacgagtt agctgacaga atccagaatg aagaaatgaa ggtgccgatg
     6061 gcgaccatgt aggccgctag caggtgcagg ccggggggaa ccttgtggcg gccaaacagc
     6121 aagacaccga gaaacgccgc ttccagaaag aacgcggtaa ccacttcata ggccaaaact
     6181 ggccctaaga agttggatgc ggtatacgcg aagttgctcc agtttgtgcc gaactgaaac
     6241 gccatgacca gacccgagac cacgcccatg ccaaacacca cggcaaagat ctttgtccaa
     6301 aacgcagaca accttaccca gtgcgggctc tttgtgcgaa atgccagggt ttctaaaacg
     6361 gcaatgtagc tcgccaatcc aatcgtgaac accgggaaga tagcgtggaa agagacgaca
     6421 aatgcgaact gcagtctaga taggaagagg ggatcgagtt ccatggttaa ggctccgcat
     6481 gccaagggtc ttgtggaccc atagtgcgag atcaccatag atcccgccat agatttatag
     6541 taccaatgaa ggcagactgg attgatccaa gtcaagtcag ggagtaaggg tatttactag
     6601 tgcgttactc gccttaaccc ttaactcttc aataccaact gagcaaactt ggcaatgtga
     6661 cggttcatgt cagcgatgct tcggtaggta ttgagcttgt tttggggcac aggccattgc
     6721 acgggtctgc tgacttggct ggccagttgc tgctctagca cggctagcgt ggcatctgac
     6781 gggtcaccgc ctagtttggc acgatgatcg atcctgcgcc gcaattccgg cacgggggcg
     6841 tgacacgcca gaatatggat tttgatcgag aaatgcttag cgagtttgtc aaagcgatct
     6901 acatgcgttt gggacaaaaa cgtcgcatcg acaataacgg tcatgttctg cgccaacagg
     6961 atcttagtca gacgggcaag ctcggcatag gtcgcccgtg tggctttcgc tgagtagagc
     7021 ctgtccggat gtttaatttc atcggtgaat aattgcttgc gaatcacgtc ggctcgaagg
     7081 cgtatggccg ataggtgtgt ggcgagctct gcggcaacgg tggatttacc gctaccactt
     7141 agtccggtga gcaagaccaa tctaggtggg ttgggcgctg cgatcagttg gcccaccaat
     7201 gaccagtaac gctgcagggt acgttggttg ttagaagtgt tgccagacag tgccgcaact
     7261 ttggctctga ccactgcacg gtatagcgtg tagtagcgca gtagtcttaa ccccgcgtag
     7321 tcacctgtgt gttcgcacca agcgttcatg agcgtccagg ccaagtcagc acgaccaaat
     7381 gccaataagt ccatgaaggt gaaggcgata tcgcccatga tgtcgatctg gcgcagatcg
     7441 gcattaaatt ccaacgcatc aaacgccatc acatgccctt cgaagcgcac taggttggcc
     7501 agatgcaaat cgccgtggcc atcgcggtag aacccctggt gctgccgttg ggtgatcaag
     7561 tgctgcaagc ggtggtgttc ggtgtttgcc cattggcgca ctgagcgaat tttggtttct
     7621 aagtccggtt tgagtgccgc gagctcgt
//
LOCUS       DATBNL010000375         5220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_173616, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000375 DATBNL010000000
VERSION     DATBNL010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5220
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173616"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1577)
                     /locus_tag="VIC30_06485"
     CDS             complement(<1..1577)
                     /locus_tag="VIC30_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014749201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEY7804066.1"
                     /translation="MSKHSIEQEVKRRRTFAIISHPDAGKTTLTEKILLFAGAIQIAG
                     SVKARKASRHAASDWMEIEKQRGISVASSVMQMEYEDCVINLLDTPGHQDFSEDTYRV
                     LTAVDAALMVIDAANGVEPQTIRLLEVCRARNTPIITFINKLDREVKMPLDLIEEVES
                     HLGMDVVPFSWPVGMGKQFSGVFDIELNRMRLFKSGRDRRADEQDDTIEGLNNPELEQ
                     KFGQAFLQAKEEIELIQAASPPFDHDAFLHARQTPVFFGSAINNFGVQEVLEALVKYA
                     PAPGARQALERTVEPDESKFTGVVFKVQANMDPAHRDRVAFVRVSSGRFTRGMRLKVS
                     RNQKEIRPNNVVSFLSQRRELVDEAFAGDVIGIPNHGVLHLGDVLSEGEKLQFTGLPF
                     FAPELFQAVEVKDPLRTKQLRTGLTQLGEEGAIQVFRPVAAGATILLGAVGQLQFEVV
                     IHRLKTEYGVEARLMPARYTLARWVSAQDSKVLTKFLDANADQIAYDVIDAPAYLASS
                     PAQLRVVQERYPDVQFHT"
     gene            complement(1658..2989)
                     /locus_tag="VIC30_06490"
     CDS             complement(1658..2989)
                     /locus_tag="VIC30_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY7804067.1"
                     /translation="MSTPNEFAGLALAQPLLKAIEQQGYTQPTPIQAKAIPEVLAGHD
                     LMAAAQTGTGKTAGFTLPILHQLLEKGAGQPTPGRPRVLILTPTRELAAQVHESVKTY
                     GSQTRITSLVMFGGVNINPQIAALKKPVDILVATPGRLLDHVSQKTLNLSEVGVLVLD
                     EADRMLDMGFIRDIRKILAMLPTKRQNLLFSATFSDDIRRLARGVLNNPTEVSVSPPN
                     TTAQRVQQTVHLVPQSDKRDVLSHIIRESGWHQVLVFTRTKHGANRLAERLVKDGLQA
                     AAIHGNKSQAARTRALDGFKTGKVSVLVATDIAARGLDIDQLPQVVNFELPNMPEDYV
                     HRIGRTGRAGAAGSALSLVDQDEMKYLKAIERLTKQPIDQQPAPSGWVRRAETPDTRA
                     PKPSMGRARAADDGPRKPRAANSSHGPSGANGQARSRRPARPTRTTVSNPA"
     gene            complement(3149..4570)
                     /locus_tag="VIC30_06495"
     CDS             complement(3149..4570)
                     /locus_tag="VIC30_06495"
                     /inference="COORDINATES: protein motif:HMM:NF023407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HEY7804068.1"
                     /translation="MLKVDRALQIAVVGHTNTGKTSLLRTLTRDRLFGEVNDAPGTTR
                     HVQSASVMLDDQAALVWYDTPGLEDSVGLRDYIESLIRAGERLDNHDRIERFLADPMA
                     DVSFEQEHRVLVQAMQSDALLYVVDARDEVLAKHRDELFLLQACARPVLPVLNFVASP
                     QADTKPWVQVFARQGMHVYVGFDSISPPINGQQMMYDTLGQVLAEHRPLLNALSVSAA
                     QQRRDRVIAAIDLLAALCVTVAGLNRMVKDDVAAIEQAIKKQQDEVREHEQLFVEHIL
                     ELYEFSTEDYLPTTEGWSDGQWQADVFSEETLAKLGIKLGKGAAVGAAAGAVVDILSA
                     GLSLGTGTLIGAAAGSAWQSVDRFGKDIAAKWRGQRSLMVSDAVVLALATRNIRLIAA
                     LEQRGHASHQPLILDKTQEATPAFDHSALLDAIGPARQQTVKRQLASLVGAVPTNSAA
                     AREVKQVLLQADGLRLLTVDGLH"
     gene            complement(4574..>5220)
                     /locus_tag="VIC30_06500"
     CDS             complement(4574..>5220)
                     /locus_tag="VIC30_06500"
                     /inference="COORDINATES: protein motif:HMM:NF022518.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEY7804069.1"
                     /translation="ALDEPSARLAWANWLMGAVVVFGLLPRLIAMVISALALRYRYRA
                     LSMTLNDAYALSLGHKFDRLTMRSQVDGPPGAQETWPQISGIAPEDALSDAAVVALET
                     RLGDNLHEQFGVHATLLPPLDDRASRKQAQERLLELKPRRLLVVLDARQTPDRGLVRT
                     LLALGSHAVDTKVLLQHVDDERARLAAWRARLADIGLPTDPGRSGDLVSWLRGR"
BASE COUNT         1214 a         1502 c         1349 g         1155 t
ORIGIN      
        1 gtgtgaaact gcacatccgg gtagcgctct tgcaccaccc ttaactgggc gggcgagctt
       61 gctaaatatg ccggtgcatc aatgacatca taggcaatct gatcggcatt ggcatctaaa
      121 aacttggtca gcaccttgga atcttgcgca ctgacccagc gcgcgagcgt atagcgtgcg
      181 ggcatcagac gtgcctccac accatactcg gtctttaatc gatggatgac aacctcaaat
      241 tgcaactgac ccaccgcacc aagcaaaatg gttgccccgg ctgccaccgg tcgaaatacc
      301 tgaatcgcac cctcttcacc gagttgtgta agaccagtac gcaattgttt ggtacgtaac
      361 ggatccttga cctcgacggc ctgaaacaat tccggcgcaa aaaacggcag accggtaaat
      421 tgaagcttct caccctcact taaaacgtcg cccaaatgca acaccccgtg gttgggaata
      481 ccaatcacat cgccggcgaa agcttcatcg acgagctcgc gtcgttgcga taggaaagac
      541 accacattgt tgggccggat ttctttttgg ttacgactga cttttaagcg catgccgcgg
      601 gtgaatcgac ccgaactaac acgtacaaag gccacacggt cgcgatgcgc ggggtccatg
      661 ttggcctgca ctttaaaaac cacaccagta aatttgctct cgtctggctc aaccgtgcgt
      721 tcaagcgcct ggcgcgcgcc cggtgccggg gcatatttaa ccaacgcctc aagcacctcc
      781 tgcaccccaa agttgttgat cgcagaccca aaaaataccg gcgtctggcg cgcatgaaga
      841 aacgcatcat gatcaaacgg cggcgaagcc gcctggatca gttcaatttc ttctttggcc
      901 tgcaaaaacg cttgtccaaa tttctgttca agctcaggat tattcaaacc ctcaatagtg
      961 tcgtcttgtt cgtcagcacg ccgatcacgg cctgatttga acagccgcat gcggtttaac
     1021 tcaatatcga acacaccgct gaactgtttg cccatgccaa ccggccagga gaacggcaca
     1081 acatccatgc caagatgcga ctcgacctct tcgatcagat ccagtggcat cttgacttct
     1141 cgatcgagct tattgatgaa ggtgatgatg ggtgtattgc gtgcgcgaca aacctctagc
     1201 aaacgtatgg tttgtggctc tacaccattg gctgcatcaa tgaccatcag cgcagcatcg
     1261 accgccgtta agacgcgata ggtgtcttca gaaaagtctt ggtgaccagg tgtgtccaac
     1321 aaattgatca cacagtcttc gtactccatc tgcatgaccg acgaagctac cgaaatgcca
     1381 cgctgctttt caatttccat ccagtccgaa gcagcatgtc gcgacgcttt acgcgccttg
     1441 acgctgcctg cgatctgaat cgcaccagcg aacaatagaa ttttctcagt cagcgtggtc
     1501 ttgcccgcgt cggggtggga aatgatggcg aaggttcttc gccgtttcac ttcttgttct
     1561 atcgaatgtt tagacatcag aaaaaagtcg tttcgttgct ggtgccgtca caacactagg
     1621 ttgctggcaa gaaaacctcg atcgtgattc taacggttca agcagggttg ctgaccgtcg
     1681 ttcgtgtcgg tcgtgccgga cgtctcgatc gggcctgtcc attggcacca ctgggaccat
     1741 gagagctatt agcagcgcgg ggcttacggg gcccatcgtc tgccgcacgt gcacggccca
     1801 tacttggctt gggcgcgcgc gtatctggcg tctcagcgcg gcgaacccag ccacttggtg
     1861 ccggctgctg atcgatgggc tgcttggtca gtcgctcgat ggccttcaga tacttcatct
     1921 cgtcctgatc aacaagcgag agagcactgc ctgcagcccc ggcacgacca gttcggccaa
     1981 tccgatgcac ataatcttct ggcatattcg gcaactcgaa attaaccacc tgcggcagtt
     2041 gatcgatgtc caagccgcgt gcggcaatat cagtggccac caggactgac accttgccgg
     2101 ttttaaaccc gtcaagcgcg cgggtgcgag ccgcttggct tttgttgccg tggatcgccg
     2161 cggcctgcaa cccgtctttg acaagtcgct cagccaagcg gttggcaccg tgcttggtgc
     2221 gcgtgaatac gagtacctga tgccagccac tttcgcgaat aatgtgacta agcacatcgc
     2281 gcttgtcaga ctggggtact aagtgaacag tctgctgcac gcgctgtgcg gtggtgtttg
     2341 gcggactgac tgaaacttcc gttggattat tcaagacacc acgtgccaag cgacgaatgt
     2401 catcagaaaa cgtcgcagaa aacagcaagt tctgacgctt ggttggcagc atcgccaaaa
     2461 tcttgcgaat gtcacgaata aaacccatgt ccagcatccg atcggcttca tcaagcacca
     2521 ataccccgac ttcggagagg ttcagcgttt tttgtgaaac atgatcgagc aagcgtccgg
     2581 gtgttgccac caagatatcc acgggctttt ttaaggcagc aatctgtgga ttgatattga
     2641 cgccaccaaa cattaccaat gaggtgatgc gggtctggct gccataggtc ttgactgact
     2701 cgtgcacctg ggctgctaat tcccgggtag gcgtcaaaat cagcacacgt ggacgtccgg
     2761 gcgtgggttg gcctgcgcct ttttccagca attgatgcag gatgggcaag gtaaagcccg
     2821 ccgtttttcc ggtacctgtt tgagcggccg ccattaagtc gtgaccagcg agcacctcgg
     2881 gtatggcctt ggcctgaatg ggcgtaggtt gtgtatagcc ctgctgctca atggctttca
     2941 gcaggggttg tgccagcgca aggccagcaa attcgttggg ggtagacaat gaaataactc
     3001 cgtagccaca cgagccgctt atgcagcgac tccaatcatc gtgtgcgcat caggaaatga
     3061 cgcttaaaac caagtttcac aggtttcgaa gcggcgagcc aagtgcggct ctgtggcgtc
     3121 gggtggactg gaacattccg acgagtagtc agtgtaaccc atcaactgtt aatagccgca
     3181 aaccatcggc ctgcaatagc acttgcttga cctcgcgggc agccgcgcta ttcgttggca
     3241 cagccccaac cagactagcc agttggcgct ttaccgtctg ttgacgcgcg ggtccaattg
     3301 catctaagag tgcgctgtga tcgaacgcag gggtggcctc ctgcgtttta tctagaatca
     3361 agggctgatg actggcatga ccacgctgct cgagtgcggc tattaaccga atatttcgag
     3421 tggcaagagc caacacaacg gcatcactga ccatcagcga acgttgcccg cgccatttgg
     3481 cagcaatgtc tttgccaaaa cgatccacgc tttgccaggc cgagccggcg gctgcaccaa
     3541 tcaacgtgcc cgtacccaga gacaggccgg cactaagaat atccacaaca gcacccgcag
     3601 ccgcccccac agcggcacct ttgccaagct taatacctag cttggccagt gtttcttcag
     3661 aaaacacatc ggcttgccac tgcccgtcag accaaccctc ggttgtaggc aaataatctt
     3721 ctgtgctgaa ttcatataac tcgaggatat gctccacaaa caactgttcg tgttcacgaa
     3781 cttcatcttg ctgtttttta attgcctgtt cgattgccgc tacgtcatcc ttgaccatgc
     3841 gattcaaacc ggcgaccgtg acgcataaag ccgctagtaa gtcgatggca gctatcactc
     3901 tgtcacgacg ttgctgtgcg gctgatacag ataatgcgtt taacaagggg cgatgttcag
     3961 caagcacctg acctaaggtg tcatacatca tttgctgtcc attgatgggg ggactaatgc
     4021 tgtcaaatcc aacatagaca tgcatgcctt gccgggcaaa cacttgcacc cacggcttcg
     4081 tgtcggcttg tgggctggcc acaaaattaa gcaccggtaa aactgggcgg gcacaggctt
     4141 gcaacagaaa tagctcatca cgatgcttag ccagtacctc gtcgcgagcg tccaccacgt
     4201 agagcaatgc atctgattgc atggcttgaa caagcacgcg gtgttcctgc tcgaacgaca
     4261 catctgccat gggatcagcc agaaatcgct cgatcctgtc atggttgtcg aggcgctcac
     4321 cagcgcgaat caaactttcg atgtaatcac gcaatcccac gctgtcctcg agacctggcg
     4381 tgtcatacca aaccaacgcg gcttgatcgt caagcatgac cgaggctgac tgcacatgcc
     4441 ttgttgtgcc cggcgcatcg ttgacttcgc caaacagccg gtcgcgagtc aaggtacgta
     4501 gcaacgatgt cttgcccgtg ttggtgtggc ccaccacagc aatctgcaac gcgcgatcga
     4561 ctttcaacat gtcttacctt ccccttaacc aagacacaag gtcgccgctg cgaccagggt
     4621 cggtcggcaa tccaatgtca gcgagtcgag cgcgccaagc tgcgagccgt gcacgctcat
     4681 catcgacatg ttgcagcaat accttggtgt ccacagcgtg gctgcccaat gccagtaatg
     4741 tcctgactaa accacggtcc ggcgtctgcc gggcgtcgag caccacgagc aagcggcgcg
     4801 gctttagctc caacaagcgc tcttgtgctt gcttgcgcga ggcccgatca tcaagtggtg
     4861 gcaacagtgt ggcgtgcaca ccaaactgtt catgcaagtt atcgccaagg cgggtttcaa
     4921 gcgccacgac cgccgcatca cttaacgcat cctctggtgc aatgccactg atctgcggcc
     4981 aagtctcttg tgcgcctggc gggccatcaa cctgcgagcg catggttaac cgatcaaatt
     5041 tatgaccgag agatagggca taggcatcat tgagcgtcat actcaaggcg cgataccgat
     5101 aacgcaacgc cagtgcgcta atgaccatcg cgatcagtct aggtagcaag ccaaacacca
     5161 ccaccgcgcc catgagccaa ttggcccagg caagccgagc cgaaggctcg tcaagcgcca
//
LOCUS       DATBNL010000376         3358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_193565, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000376 DATBNL010000000
VERSION     DATBNL010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193565"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3358)
                     /locus_tag="VIC30_06505"
     CDS             complement(<1..>3358)
                     /locus_tag="VIC30_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEY7804070.1"
                     /translation="YKGLLLANQVGVYYRDLSDPRTVSALALVHQRFSTNTFPAWPLA
                     HPYRMIAHNGEINTVKGNYNWLRAREGTMESAVLGEDLAKLYPLVYPGQSDTATFDNC
                     LELLVMSGYSLAHAMMMMIPEAWEQHAHMDPARRAFYEYHAAMMEPWDGPAAVAFTDG
                     KQIGATLDRNGLRPARYLVTDDDLVIMASEAGVLPIAESRIVQKWRLQPGKMFLIDLE
                     QGRIIDDAEIKSQLANSRPYRHWIDRLRVKLESLPKPETAAKLRHQSPVDRLDREQAF
                     GWTQEDLKFILEPMAANGEESTGSMGNDTPLAVLSDRPKPFYNYFRQMFAQVTNPPID
                     PIREQLVMSLVSFIGPKPNLLDINNVNPPLRLEIAQPVLDEDAMTLIRDVEDYTGNKF
                     RSFELDITYPAAWGADGIEARLAALCASAADAVDSGFNVLIVSDRLVDKDRVAIPALL
                     ATSAIHQHLIVRGLRTRTGLVVETGSAREVHHFALLGGFGAEAIHPYLALEAVRAFAD
                     DGDKAVANYIKAIGKGLNKVMSKMGISTFMSYCGAQIFEAVGLHASLIKKYFPGTSSA
                     IGGVNIFEVAQESLRTHAAAFSKDPVLESALDAGGDYAYRVRGEQHMWTPDSIAKLQH
                     STRANNYSTYKEYAQLINDQSKRHMTLRGLFEFRFDPAQAIPLEEVESAKEIVKRFAT
                     GAMSLGSISTEAHSVLAVAMNRIGGKSNTGEGGEDEARYRSELQTGKSDIKDGDSLAS
                     ILGSERIEADVPLQAGDSLRSRIKQVASGRFGVNPEYLASADQIQIKMAQGAKPGEGG
                     QLPGHKVSEYIAKLRCSVPGVGLISPPPHHDIYSIEDLAQLIHDLKNANARASISVKL
                     VSEVGVGTVAAGVAKAKSDHVVIAGHDGGTGASPISSIKHAGTPWELGLAETQQTLVI
                     NRLRSRIRVQADGQMKTGRDVVIGGLLGADEFGFATAPLVVEGCIMMRKCHLNTCPVG
                     VATQDPVLRKKFQGKPEHVVNYFFFVAEEVREIMAQLGIRTFDELVGRTDLLDTRAGI
                     EHWKAHGLDFTKVFYQPPTDEPRYQALEQDHGLQDALDHQLIERSKPAIEQGEKVSFI
                     VPVRNRNRSVGAMLSGEIARRHGADGLADDA"
BASE COUNT          771 a          941 c          927 g          719 t
ORIGIN      
        1 gcatcatcgg ctaagccatc ggcgccatgg cgacgcgcga tctcacctga cagcatggcg
       61 cccacgctgc gattgcggtt gcgcaccggc acgataaagg agactttctc tccttgctcg
      121 atggcaggct tgctacgctc gatgagctgg tgatccagtg catcttgcaa cccatgatct
      181 tgctcaagcg cctgataacg gggctcatct gttggcggct ggtagaagac cttggtgaag
      241 tccagtccgt gcgccttcca gtgttcgatg cccgcgcggg tatcgagcaa atcggtacga
      301 cccacgagct catcaaacgt gcgaatacca agctgagcca tgatttcacg aacctcttcg
      361 gccacaaaga agaagtaatt cacgacatgc tcaggcttac cctgaaactt cttgcgcaac
      421 accggatcct gcgtggccac tcccaccggg caggtgttta agtggcactt gcgcatcatg
      481 atgcagcctt caacgaccag tggtgcagtg gcaaagccaa actcatcggc accaagcaaa
      541 ccaccgatca caacatcacg accggttttc atctgcccgt cggcttgcac gcggatacgg
      601 ctacgcaaac ggttgatcac caacgtttgc tgcgtttcgg ccaagcccag ttcccaaggc
      661 gtgccggcgt gcttgatcga tgagattggc gaggcgcccg tgccaccgtc atggccagcg
      721 atcaccacgt ggtcagattt ggcttttgcc acaccagcgg caacggtacc gacaccgacc
      781 tcggagacca acttgaccga aatcgaggca cgcgcattgg cgttcttcaa atcgtgaata
      841 agttgagcca aatcttcaat cgaataaata tcatggtgcg gcggcggtga aatcaacccc
      901 acacctggta ccgaacaacg caacttggcg atgtactcgg acactttgtg acctggcaac
      961 tggccacctt cgccaggttt ggcaccttga gccatcttga tctggatctg atcggcgcta
     1021 gcgaggtact caggattcac gccgaatcga cctgatgcca cttgcttgat ccgggagcgc
     1081 aaagagtcac cggcttgcaa cggcacatcg gcttcgatac gctctgagcc caagattgag
     1141 gcaaggctat cgccgtcttt gatgtcactc ttgccggttt gaagctcact gcgataacgg
     1201 gcttcgtctt cgccaccttc accggtattg gatttaccac caatgcggtt catggccaca
     1261 gcgagcaccg agtgcgcttc ggttgagatc gaacccagtg acatggcacc cgtggcaaaa
     1321 cgttttacga tctctttggc ggactcgact tcctcaagtg gaatcgcttg tgccggatca
     1381 aaccggaact caaacaggcc acgcaaagtc atgtgacgct tgctctgatc gttgatcagc
     1441 tgcgcgtact ctttatacgt gctgtagttg ttggcacgcg ttgagtgctg caacttagcg
     1501 atagagtctg gcgtccacat gtgctgctca ccacgaacgc gataggcgta atcgccacct
     1561 gcgtcgaggg cgctctcaag aacagggtcc ttgctgaaag cagcggcatg tgtgcgcaaa
     1621 gactcttgcg ccacttcaaa aatattgacc ccgccaatgg cacttgatgt gccggggaaa
     1681 tactttttga tcaggctcgc atgcaagccg accgcctcaa atatctgcgc gccacagtag
     1741 gacatgaagg tggagatgcc catcttggac atgaccttgt tcaagccttt gccaatggcc
     1801 ttgatgtagt tagctaccgc cttgtcaccg tcatcggcaa acgcgcgaac ggcctcaagt
     1861 gccagatatg ggtggatcgc ctcagcacca aaaccaccaa gcagtgcgaa gtggtgaacc
     1921 tcccgggccg agcccgtctc aactacaaga ccagtgcgcg tgcgcaagcc gcgaacgatc
     1981 aagtgttggt gaatggctga agttgccaac aacgcgggga tagccactct atccttgtcg
     2041 accaggcggt ctgaaacgat caaaacatta aaaccactgt caactgcatc ggcagcgctg
     2101 gcgcacaaag cagccagacg ggcttcgata ccatcggcac cccaggcggc aggataggta
     2161 atgtccagct caaagctgcg gaatttgttg cctgtgtagt cttctacatc gcggattagc
     2221 gtcatcgcgt cttcgtcgag cacaggttgt gcaatctcaa gacgcagagg tgggttgacg
     2281 ttgttaatgt ccagcaagtt aggcttgggt ccaatgaacg acaccaacga catcacgagt
     2341 tgttcgcgaa ttgggtcaat aggtgggttg gtcacctgcg cgaacatctg gcggaagtag
     2401 ttgtaaaacg gcttgggtcg atcagaaagc acagccaaag gcgtgtcatt gcccattgag
     2461 ccagtagact cttcaccgtt ggcagccatg ggttcgagaa tgaacttaag gtcctcttgc
     2521 gtccaaccaa aggcttgctc gcggtcaagg cggtcaacgg gtgactgatg acgcagcttg
     2581 gcagctgtct cgggcttggg cagggactcg agcttgacac gcaagcggtc gatccaatga
     2641 cgataggggc ggctgttggc cagctgtgac ttgatctctg catcatcaat aatgcggcct
     2701 tgctcgaggt cgatcaagaa catcttgcca ggctgcaagc gccatttctg aacgatacgg
     2761 ctttcagcga ttggtagtac gccggcctca gatgccatga tgaccaagtc atcatcggtg
     2821 accaagtaac gcgccgggcg caggccattg cgatcgagcg tggcgccaat ttgcttgccg
     2881 tcggtaaatg caaccgcagc agggccatcc catggctcca tcatcgcagc gtgatattca
     2941 taaaacgctc ggcgcgccgg gtccatgtgt gcgtgctgct cccaggcctc tgggatcatc
     3001 atcatcatgg cgtgagccag ggagtagcca gacatgacca acagttccag acagttgtcg
     3061 aacgtcgctg tatcggactg gccggggtaa accaacggat atagtttggc gaggtcttca
     3121 ccgagtacgg ccgactccat ggtgccttcg cgtgcgcgca accagttgta gttgccctta
     3181 acggtgttaa tttcaccgtt gtgcgcaatc atgcgataag gatgtgccag gggccatgcg
     3241 gggaatgtgt tggtagagaa acgctggtga accagcgcca aagccgacac ggtgcgggga
     3301 tcagacaagt cacggtaata aacgccaacc tgattggcca gcaaaagacc tttataga
//
LOCUS       DATBNL010000377         2364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_183070, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000377 DATBNL010000000
VERSION     DATBNL010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183070"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VIC30_06510"
     CDS             <1..463
                     /locus_tag="VIC30_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804071.1"
                     /translation="APFFYPAEGTEGAGISPENPAISAAYPYPVLMTYADQDPKLVTA
                     VMTAMVDTYDTYKEAAPGNMGWGMDRQKLDWVIPYHDGAIAFFKQKGVWTDAHQKNND
                     MLIKRQQILAEAWKEVKGRSHADEQAFAQDWMKTRADALTKAGMDPVMTSW"
     gene            477..>2364
                     /locus_tag="VIC30_06515"
     CDS             477..>2364
                     /locus_tag="VIC30_06515"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HEY7804072.1"
                     /translation="MTQQAAQNNGAGQPASSPAAAGESQSRIRILTGFWRFTAISMGV
                     LSVLVALNQLLNLGFFVGFIILDTAYLYCLAALLIGLVFLFVPATKQSPRQTVPWYDA
                     VLFLASVLVFGYFAYNGKRIISEGWEFMAPTEAIFVAAVGWALLLEATRRAGGTAVFV
                     VVAIISFYPVYAEIMPGPIAGMSQDIFTTIGYHFTSSESVMGIPMRAFGQLVIGFVMF
                     GAVLQYTGASEFFNNLAFALFGRVRGGPAKVSIFASGLMGSVSGSVVSNVLTTGVVTI
                     PAMKRTGFASKYAGGVEACASTGGVLMPPIMGATAFVMAAFLGMPYAQIAIAAAVPSI
                     LFYFALFMQIDGYAARHGLKGLPVAELPSIKQTLKDGWQYIIVFVVLIYLLLVKQIES
                     LAPFYATALLLVINQFSSKYRLDRAKLEKLLVGVTASLAELAALLAGVGLIIGAMSVT
                     GLSGTLANDLIYLAGNNVYVLLVMGALTSFIFGMGMTITACYIFLAIVLAPPLVNAGF
                     DPLAVHLFMLYWGMVSFITPPVSLASFVAAGVAGARPIDVGIQSMRLGSAMYFVPFFF
                     VLNPALILRGEWSDIIPVIITAVIGIALIASALEGYLVKVGSMHTGALGLLARLVLAA
                     GGLAM"
BASE COUNT          434 a          569 c          699 g          662 t
ORIGIN      
        1 tgcgccattc ttctatccgg ccgagggtac agaaggcgcc ggtattagcc cggaaaaccc
       61 agcgatttct gccgcgtatc cttatcccgt gctcatgacc tatgccgatc aggaccccaa
      121 gttggtgacc gcggtgatga cagcgatggt cgacacctat gacacctaca aagaggctgc
      181 gcctggcaac atgggttggg gcatggatcg tcagaagttg gactgggtca ttccttatca
      241 tgacggtgcg attgctttct ttaagcaaaa aggcgtttgg actgatgcgc atcagaaaaa
      301 caatgatatg ttgatcaagc gccagcagat cctggctgaa gcttggaaag aggtcaaagg
      361 acgctcgcat gccgatgagc aagcgtttgc tcaggattgg atgaaaaccc gtgccgacgc
      421 attgaccaaa gcgggtatgg atcctgtgat gaccagttgg taagtgagcc tctttcatga
      481 cgcagcaagc agcacaaaac aacggggctg gccaaccggc aagtagcccc gctgcggctg
      541 gtgaaagcca gtcgcgaatt cgtatcttga cgggcttctg gcgcttcaca gccatttcca
      601 tgggcgtgct gtcggtgctc gttgcattaa accagctact gaaccttggg ttttttgtgg
      661 ggttcatcat tctggatacg gcgtatctgt actgtcttgc tgcgttactg atcggcttgg
      721 tttttttgtt tgtaccggca acaaagcaat caccgcgtca aaccgtccca tggtatgacg
      781 cggtcttgtt tctggcttcg gttttggtgt ttggctactt tgcctataac ggcaagcgca
      841 ttatctccga gggctgggag ttcatggcac cgactgaggc gatttttgta gcggcggttg
      901 gttgggctct tttgttggaa gcgacgcggc gcgctggtgg cactgccgta ttcgttgtcg
      961 tggccattat ttcgttttat ccggtttatg ccgagatcat gcccggccca attgccggga
     1021 tgtcacaaga tatcttcacc accattggct accacttcac gagcagtgaa agtgtcatgg
     1081 gtattccgat gcgcgccttt gggcagctgg tcatcggctt tgtgatgttt ggcgcggtgc
     1141 tgcagtacac cggtgcctct gagtttttta acaatctggc gtttgcgctg tttggtcgtg
     1201 ttcgcggtgg cccagccaag gtgtcgatct ttgccagtgg tctgatgggg tcagtctccg
     1261 gcagtgtggt ctctaacgta ttgaccactg gcgtggtcac catcccggca atgaaacgca
     1321 cgggttttgc tagcaagtac gccgggggcg tggaagcttg tgcttcaacc ggtggtgtac
     1381 tgatgccgcc aatcatgggc gcgactgcgt ttgtgatggc cgcctttttg ggtatgccct
     1441 acgcacagat tgcgattgct gctgcggtgc cttcgatctt gttttacttt gcgttgttca
     1501 tgcaaattga cggttacgcc gcgcgtcacg ggctaaaagg gctgcctgtt gccgaattgc
     1561 cttcgattaa gcagacactg aaagacggtt ggcaatacat catcgtgttt gtggtgttga
     1621 tttatttgtt gctagtcaag cagatcgagt cattggcacc gttttatgcc accgccttgc
     1681 tgctcgttat taaccagttc agtagcaagt accgtttgga tcgcgccaaa cttgaaaaat
     1741 tactcgtcgg tgtgacggca tcgctggctg aattggcagc gctgttggct ggcgtgggtt
     1801 tgatcattgg cgcgatgtcc gtgaccgggt tgtcaggcac cttggccaac gatttgattt
     1861 atctggctgg caataatgta tatgtgctgc tggtgatggg ggcgctaacg agcttcattt
     1921 ttggcatggg catgacgatc acggcttgct atatcttctt ggcaatcgtt ttagccccac
     1981 cgttggtcaa tgccgggttc gacccgctgg ccgtgcattt gttcatgctg tattggggca
     2041 tggtgtcttt cattacgccg ccggtgtcat tggcatcgtt tgtcgccgct ggcgtggctg
     2101 gtgccaggcc cattgatgtc ggtattcagt ccatgcgcct tggcagtgcc atgtactttg
     2161 taccgttttt ctttgttcta aatccggcgc tgatcttgag aggtgagtgg agtgacatca
     2221 tcccggtaat catcacggcc gtaatcggta tcgctttgat cgcgtcggca ctcgagggtt
     2281 atctggtgaa ggtgggctcc atgcacacgg gtgccctagg tctattggca agattggtgt
     2341 tagcggctgg cgggctggcc atgg
//
LOCUS       DATBNL010000378         1733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_113932, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000378 DATBNL010000000
VERSION     DATBNL010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113932"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1124
                     /locus_tag="VIC30_06520"
     CDS             <1..1124
                     /locus_tag="VIC30_06520"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HEY7804073.1"
                     /translation="TTVDIWTHKQQRHAYEVTITSAGLKQRLAQVQAVLAELQGVSAR
                     LAGQHIVVEGREVSTENRKHLEQVLQRYPDVVDLTSSIAWDQMVMLDVKVLELPRHQL
                     RELGVHWQSSPDGGLHAGAAWQLGSAAAGLAQEGPITGAGALFGMNELLTARLQAMTQ
                     TGQAVLLAQPQLLARSGSPASFEAGGEVPYAFVDKEGKHTTLFKKYGVMLNVTPHIDR
                     HGSIRAKVDVEVSSIDPSITTEVGPAMRMRKASTEFNIKSGQTLVLGGFISHEQVDGQ
                     SGFAGVNKQSKRQVELAIFVTPVIVTPDHPDMMARVTRGQSVQDWQLGPTHQVNVPIN
                     GDPPTGTHRWHPAHPGLSQWEQGGGSPRGNTYSFDPISH"
     gene            1139..>1733
                     /locus_tag="VIC30_06525"
     CDS             1139..>1733
                     /locus_tag="VIC30_06525"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY7804074.1"
                     /translation="MLAVEIHYEDGRQQSLEVAVPAVIGKDADCEIRLAHWRVARAQA
                     RVSRLGEFLQIEDFGSLTGMRINGLRCAQHFPLLATDDVTIGPCRLRLRWVQPVSSAN
                     VQNIHESVEQACVSTPVLDAEVRSTLHAELVALLDVRKLDLNNLPADVLKAKASELLR
                     EMLDRDNRGLTVLEQEMAIEAVVSDVAGLGVLQSLIED"
BASE COUNT          393 a          448 c          507 g          385 t
ORIGIN      
        1 ccacgacggt tgatatttgg acgcataagc aacaacgaca tgcctatgaa gtgaccatca
       61 ccagtgcggg tctaaaacaa cgattggccc aagtgcaggc ggtgctcgct gaacttcaag
      121 gggttagtgc gcgtttggcc gggcaacaca tcgtggtcga gggcagggaa gtatccaccg
      181 agaaccgtaa gcacttagag caagtgttgc agcgctaccc ggatgtggtg gatctcacga
      241 gctcaattgc ttgggaccag atggtgatgc ttgatgtcaa agtgctggag ttgccgcgcc
      301 atcaattgcg tgaacttggc gtgcattggc aatcctcgcc agatggcggc ttgcatgctg
      361 gtgctgcgtg gcaactcggt agcgcagcgg caggtctggc tcaagaaggg ccgatcacgg
      421 gcgccggggc actgtttggc atgaatgagc tgctaacagc gcgactacag gcaatgaccc
      481 agactggaca agcggtattg cttgcgcaac ctcagttact ggctcgcagc ggctcgccag
      541 cttcgtttga agccggcggc gaggtgcctt atgcgtttgt cgacaaagaa ggtaagcaca
      601 ccacgctatt taagaagtac ggcgtcatgc tcaatgtcac ccctcacatt gaccgacacg
      661 gatctattcg tgccaaagtc gacgtcgagg tcagttccat cgacccctca atcacaacag
      721 aagtcggtcc agccatgcgc atgcgcaaag ccagtacgga attcaatatc aagtcgggac
      781 agacactggt gcttggtggt tttatttctc acgaacaggt cgatggtcaa agtggatttg
      841 ccggtgttaa caagcaaagc aaacgtcagg tcgagttggc gatctttgtg acaccggtca
      901 tcgttacacc ggatcatccc gacatgatgg cacgtgtcac ccgtggtcaa agcgttcaag
      961 actggcagct aggaccaacg catcaagtta atgtgcccat caacggcgac ccgccaaccg
     1021 gcacacatcg ctggcatccg gcacatcctg ggctgtctca gtgggagcag ggcggtgggt
     1081 caccgcgcgg caacacctat tcatttgatc caatcagtca ctaggagtct cgttaatcat
     1141 gcttgcagtt gaaatacatt acgaagacgg cagacagcaa tcgcttgagg tggctgtacc
     1201 ggccgtcatt ggcaaagatg cggattgtga aatcagactt gcgcattggc gtgtggcgcg
     1261 cgcgcaagcg cgggtgtcac ggttgggcga gtttttacaa attgaagatt tcggtagcct
     1321 gactggcatg cgcatcaatg gtctgcgatg cgcccagcac ttcccgttgc tggccaccga
     1381 tgatgtcacc attggtccgt gtcgcttgcg gctgcgctgg gttcagcccg tttcatctgc
     1441 taacgttcag aacatccatg agtcagttga acaagcgtgt gttagcactc ccgtgctaga
     1501 tgccgaagtt cgctcgacct tacatgctga gttggtggcc ctgctcgatg tgcgcaagct
     1561 tgacttgaac aacttgccag ccgatgtgtt gaaggcaaag gcgtccgaat tgctcagaga
     1621 gatgcttgat cgcgacaatc gcggactcac ggtgctcgag caggaaatgg ccattgaggc
     1681 ggtggtcagt gacgtggccg gtcttggcgt actgcaatct ttaattgaag atc
//
LOCUS       DATBNL010000379         2834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124200, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000379 DATBNL010000000
VERSION     DATBNL010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124200"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..673
                     /locus_tag="VIC30_06530"
     CDS             218..673
                     /locus_tag="VIC30_06530"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEY7804075.1"
                     /translation="MCLVATLLVSPLRDWLHEPALIRLRRMCGLFTFFYASLHTLAWA
                     WWQQNFVPIDMLLDVFERPFVSVGLAAFLVLLAMALTSSQRAMRAMGRYWKALHRWIY
                     LAAILSIVHYWLHKAGKNDFSDVMIYGAVVAVLLGWRLWQRWRPKPNHP"
     gene            complement(664..1383)
                     /locus_tag="VIC30_06535"
     CDS             complement(664..1383)
                     /locus_tag="VIC30_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY7804076.1"
                     /translation="MTTTAPGTLHLIAVGLSDQAIDTWLPMAAVRQAGQLTHYIAENA
                     KTARAFLKHVDLEHPIQEIDIQTLTSKIDDSTIRQWLSPLSSGQSVGLVSEAGCPAVA
                     DPGARVVAVAHAIGAAVKPWVGPSSIILGLMASGLDGQRFAFHGYAPIKPDERTKQVK
                     QWEQLSKRLSQTQILIETPYRNVALCEGLLQTLTPNTRLCLARDLTGAKEWVRTLTIS
                     QWKQQAKPDLEHLPTLFLFQG"
     gene            complement(1380..2009)
                     /locus_tag="VIC30_06540"
     CDS             complement(1380..2009)
                     /locus_tag="VIC30_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015040227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HEY7804077.1"
                     /translation="MPADALPARLILASSSTYRQQMLQRLMLPFEAISPDVDETPLPN
                     EAPASLARRLALTKARAINKRVLAAAVVIGADQVLELHGQPMGKPGNRARARQQLLQL
                     SGQCVTFHSALAVVSQTEEQLAVSACQVTFRELTPAQIDRYLDLETPFDTAGSAKAEG
                     LGIALLSSLQSTDPTAIIGLPLIELTRMLAKAGMDPLDFASLPHLQATP"
     gene            2318..>2834
                     /locus_tag="VIC30_06545"
     CDS             2318..>2834
                     /locus_tag="VIC30_06545"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceD family protein"
                     /protein_id="HEY7804078.1"
                     /translation="MSLPESDRSWRERCQSQFGTRPVVDVPTLVGRGDDILGAVAASS
                     FKRLTLDLPTQPIIRADLGLDPDQPGVVWFEFSGASQAGRRDRVWLKVQAILTLTCQR
                     CMGEMQLAVDETASFVCYRTEADALAAVQDEDDPSAPEPLVVQEPVDILELVQDQLIL
                     ALPYVPKHESCE"
BASE COUNT          571 a          656 c          843 g          764 t
ORIGIN      
        1 taacctcaat tatacttttt tttgtattct tagatgagta tcaaattttg atgacttcat
       61 taattttaaa tgttgtattc ctaagaaaaa ttctagttaa ttatttaaaa tcccctgaaa
      121 attcaaaaag tctctttaaa aaagtttaaa attattttag ttatatattt taaaggttgc
      181 atttaaaaat aggaccttta agatcacttg gacgctggtg tgtttggtgg caactttgct
      241 ggtgtcgccg ttgcgcgact ggttgcacga gcctgcctta atccgtttgc gccgtatgtg
      301 cggtttgttt acatttttct atgccagctt gcatacgctg gcttgggcct ggtggcaaca
      361 aaattttgtg ccgattgaca tgttgctcga tgtgttcgag cgtccgttcg tatccgtggg
      421 tctggcggct tttttggtgt tgttggccat ggctctgacc tctagtcagc gcgccatgcg
      481 cgccatgggc cggtactgga aagccctaca ccgttggatt tatttggctg ccatcttgtc
      541 catcgtgcat tactggctac acaaagctgg caagaatgac ttctctgatg tcatgatcta
      601 cggggcggtg gtcgcggttc tgttggggtg gcgactgtgg cagcgttggc ggccaaagcc
      661 caatcatccc tgaaacaaaa acaacgttgg caagtgctca agatcgggct ttgcttgctg
      721 cttccattgg ctaattgtta aggtgcgcac ccactctttg gcgccggtga ggtcgcgcgc
      781 tagacacaag cgcgtgttcg gtgtgagggt ttgtaacagt ccttcacaca acgcaacgtt
      841 gcggtagggc gtttcgatca agatttgggt ctgggatagc cgtttggaga gctgctccca
      901 ttgtttgacc tgttttgtac gctcatcggg tttgatcggc gcgtagccat gaaacgcaaa
      961 gcgctgacca tcaagcccgc tggccatcag accgagaata attgaagatg ggccaaccca
     1021 aggtttgact gctgcaccga tggcgtgggc tacggccaca actcgcgcac ctgggtcagc
     1081 cacggcgggg cagcccgctt cggagaccaa gcccaccgat tgccccgagc tcaagggcga
     1141 gagccactgg cgaatcgttg agtcgtcgat tttactggtg agcgtctgga tatcgatttc
     1201 ttggataggg tgctcgagat caacatgttt taagaatgcg cgtgcggttt tagcgttctc
     1261 ggcgatgtaa tgcgtcaact gacccgcctg acgcacggcg gccattggca gccaagtgtc
     1321 gatggcttgg tcagaaagtc caactgcgat gaggtgcaat gtgccgggtg cggtggttgt
     1381 catggtgtcg cttgcaagtg aggaagtgaa gcaaagtcca gaggatccat gccagctttt
     1441 gccagcatgc gggttaattc aatcaacggt aaaccgataa tagccgtggg atctgtgctt
     1501 tgcaggctcg aaagcaatgc gatgccaagc ccctcggctt tagcgctacc agcagtgtca
     1561 aacggggttt caaggtcaag gtatcgatca atttgtgccg gtgtgagttc gcggaaagtg
     1621 acctggcagg cactaacagc gagctgctct tcggtttggc tcacaacggc taacgcgctg
     1681 tgaaaggtca cgcactggcc gcttagttgt aaaagctgtt gtctggcacg ggcgcggtta
     1741 cccggtttgc ccatgggttg accatgaagt tcaagcactt gatcggcacc aatgaccacc
     1801 gccgcagcta agacacgctt gttaatcgct cgcgccttgg tcagtgccag acgccttgcc
     1861 agtgaagccg gtgcttcgtt tgggagcggg gtctcatcaa catcggggct gattgcttca
     1921 aagggcaaca tcagcctttg cagcatctgt tgccggtagg tcgagctcga tgccagaatt
     1981 agacgggcgg gtagggcatc agcgggcatg tggcctcacg ttggtggcgt tagtcgttca
     2041 ggtggttgtt tttaaggcac ttcttggcac tgacttggtt gtgcaaagct ttcaatccgg
     2101 ggtatgatag cgggctttgc aagtgcaagc gagtcgccta gctagtcgat atgtgtggtg
     2161 gtggtctcat cagtgcgatg tgaggagttt tgagtgaggt tttcagtggg ttcccatcat
     2221 gttgtgggta cccatgatat ttccacccga tgcctcaggg tcgccttaag ccaaaacgtt
     2281 gccgtttgcc agctgcctaa ctgttcctga gtcgagtatg agcctgcctg agtctgatcg
     2341 atcgtggcgt gagcgttgcc aatcccagtt tggtacgcgg cctgttgtgg atgtgccaac
     2401 gttggtcggg cgaggtgatg acattttggg ggcggtggcg gcgtcgagtt ttaagcgact
     2461 gacattggat ttgcctacac agccgattat tcgcgccgat ctagggctcg atccggatca
     2521 gccgggtgtg gtctggtttg aattcagtgg ggctagtcag gctgggcgcc gggatcgggt
     2581 ctggctgaag gtccaggcaa ttttgacgct aacctgtcag cgttgcatgg gcgaaatgca
     2641 gttggctgtt gatgagacgg cctcgtttgt ttgctaccgg actgaggctg atgcgttggc
     2701 tgcggtgcaa gacgaggacg atccgtctgc gcccgaaccg ctcgttgtac aagagccggt
     2761 ggatatattg gaattggtgc aagatcagtt gattctggca ttgccctatg tgcccaagca
     2821 cgagtcttgt gagc
//
LOCUS       DATBNL010000380         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_183113, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000380 DATBNL010000000
VERSION     DATBNL010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183113"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VIC30_06550"
     CDS             complement(<1..716)
                     /locus_tag="VIC30_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804079.1"
                     /translation="MTSQSKTLKTQSLQLDLVAMAMITAVIIAAAWVVYERLEEQFLR
                     NSIADASNAGVFIDSELLHAQEQLSLFAKMPATQRRILAERGFDTFSDLYALDDQGRI
                     NTIYKAKPQSRLFEGYAFSAGPVWRQLLQSSNVARVSSIVAGYEDGAPSIYVAYRTGT
                     QIVLGRLNLSYIQNFINQYSRITGNVLLLTTDKGVVMVSGRPELVLPRLDMTALNPDM
                     RPSQPITLDNQRWVPVISDSP"
     gene            complement(730..>1820)
                     /locus_tag="VIC30_06555"
     CDS             complement(730..>1820)
                     /locus_tag="VIC30_06555"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7804080.1"
                     /translation="IGLLLLAVGLAGTVYWAITALTPKKITVAVDAPIMNKRIFDPSD
                     MDAARLYFEENPDSRMQIKELYYDFDPKRSPERFEAAMDDGTEFFVTTQPSSTLLAST
                     HLFQTSSALLINTSSTNPSTTGKDDYIIRIIADAQAEQQAIAQYIDSLPGKRLLVLQD
                     SANSEYTDPAFDYFIGALEDRGHWQITHEKLLFESFNPTRFQRLMSEPFDALYVLGGD
                     FQASMGNMVQLFHQYHPDAPIVLTPWARSNAIYETAGPALDRMVLLGHHPGKAQDPAI
                     EDYLQRFTKRYGYQPMAMALMVRQGLELLEQAFAAGHTTPEAVKQYLLSKSRLQTSLG
                     TIEIDDYGDSQQRLHPIDDLGTELRPTE"
BASE COUNT          419 a          432 c          504 g          465 t
ORIGIN      
        1 ggcgagtcac tgatgactgg gacccagcgt tggttatcta atgtaatggg ctggcttgga
       61 cgcatgtcag ggttcaatgc tgtcatgtcc agtcgcggta aaaccagttc cggacggcct
      121 gagaccatga ccacaccttt atcggtggtc agcagcaaga cattaccggt gatgcgagag
      181 tattgattaa tgaagttttg tatgtaggac agattcaagc gacccagcac gatttgtgtc
      241 ccggttcggt aggcgacgta aatgcttggg gcaccatctt catagcccgc aacaatcgat
      301 gaaacgcgtg cgacgttgct actttgcagc aattgccgcc agacaggacc cgcgctaaag
      361 gcatagccct cgaacagacg gctttgcggc tttgctttgt agatcgtgtt gatgcgtcct
      421 tggtcatcga gcgcatacaa atctgagaac gtatcaaagc ctcgctcggc cagaatacgt
      481 ctttgtgttg ctggcatttt ggcaaataga ctcagttgct cctgcgcgtg caacagctca
      541 gaatcaataa acacacccgc gttggacgca tcggcgatgc tgtttctgag gaactgttct
      601 tctagccttt cgtagaccac ccaggccgcg gcaatgatga ctgccgtgat cattgccatg
      661 gcaaccagat cgagttgtaa gctctgggtt tttaaagtct tagactggct tgtcatgaat
      721 cagcctcatc tactcggtgg gcctgagctc tgtgcccaag tcgtcgatcg ggtgtaagcg
      781 ttgttgactg tcgccatagt catcgatctc aatggtgccc aagctggttt gcagcctgga
      841 tttagacaac agatactgtt tgacggcctc gggcgtggtg tggccagcgg caaatgcctg
      901 ttctaacagt tcgagccctt gacgcaccat gagtgccatg gccatgggct gatagccata
      961 tcgtttggtg aagcgctgca aataatcctc aatggccggg tcttgtgctt tgccaggatg
     1021 gtggccaagt agcaccatgc gatccaaggc aggcccggct gtctcgtaaa tggcattgct
     1081 acgcgcccat ggtgtgagca caattggcgc atcggggtgg tactgatgaa agagttgcac
     1141 catgttgccc atactggctt ggaaatcacc accgagcaca tagagcgcat caaatggctc
     1201 agacatcaaa cgctggaatc ttgttggatt gaagctttca aacaagagtt tttcatgagt
     1261 gatttgccag tgaccacgat cttctaacgc accgatgaaa taatcaaacg caggatcggt
     1321 gtattcgcta ttggcgctgt cttgtagaac caacaagcgt ttgccaggaa gggagtcgat
     1381 gtattgcgca atggcctgtt gttcggcttg cgcatcggca atgatgcgaa tgatgtagtc
     1441 atctttgccc gtggtgctgg ggtttgttga tgaggtgttg atcagcaatg ctgaagacgt
     1501 ctgaaacagg tgggtactag ctagcaaggt tgatgagggt tgggttgtca caaagaactc
     1561 ggtcccatca tccatggcag cctcaaatcg ttcgggcgaa cgcttgggat caaagtcgta
     1621 atacagttct ttgatctgca tccgactatc ggggttctcc tcaaaataca agcgtgcggc
     1681 atccatgtcg cttgggtcaa agatgcgttt attcatgatg ggcgcatcga cagcgacggt
     1741 aatttttttg ggggttaagg ccgttattgc ccaataaacc gttcctgcca gtccgacagc
     1801 aagtaatagc aggccgattg
//
LOCUS       DATBNL010000381         2149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74512, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000381 DATBNL010000000
VERSION     DATBNL010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74512"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..1871
                     /locus_tag="VIC30_06560"
     CDS             189..1871
                     /locus_tag="VIC30_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012358178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEY7804081.1"
                     /translation="MSTVPTIAPLPADHMYVQGLDKTPANHVALSPISFIERAALVFP
                     EKLAIVHGELRQRWGQTFARCRQLASALQKHGIGVGDTVAVMLPNTPPMVEAHFGVPM
                     AGAVLNSLNTRLDANSIAFMLNHGEAKLVIVDSELAPVMREALTILKQEHGREPTVIE
                     AHDEPFVAPDGISEVSYEALVAQGDADFEVKLPEDEWQSICLNYTSGTTGDPKGVVYS
                     HRGAATNAISNILEWDMARHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKVEART
                     IFDLIRTHGVTHYCAAPIVHSLLINAPEDMKADVPAGVKAMVAGAAPPAAMIEGMENM
                     GFELTHVYGLTEVYGPAAVCVKHEDWDSLDISERARLNSRQGVRYHLQADVRVLDPQT
                     MQPVPWDGQTMGEIMFRGNITMKGYLKNPKATDAAFAGGWFHSGDLAVQYPDGYVKIK
                     DRSKDIIISGGENISSIEVEDILYRHPAVLAAAVVAMPDPKWGETPCAFIETKPDANV
                     TEGDIVAFCKEHLANFKVPRAVIFGEVPKTSTGKIQKFELRKQAGSAKALES"
     gene            1910..>2149
                     /locus_tag="VIC30_06565"
     CDS             1910..>2149
                     /locus_tag="VIC30_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014427807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003860 - 3-hydroxyisobutyryl-CoA
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY7804082.1"
                     /translation="MSDLVTRQAVKPGLIRLTLNRPDAFNALSEAMLAALQTELDAVA
                     RDETIKVVILAATGKAFCAGHDLKEMRAAPSQDYYE"
BASE COUNT          523 a          587 c          580 g          459 t
ORIGIN      
        1 cactggcggg tgtaaagtag tggatggaga gactgggttt tgattatgcg ccagtgagcc
       61 aagtcgcaag cgcaaaccaa ttctgtgtgt atcctttctt atgcactaca actaataaaa
      121 aataacgaat aacaaataac caataaccga atcaaagctc gcaacactga cccgacggag
      181 tctgcatcat gtccacggta ccaaccatcg cccccctgcc cgctgaccac atgtacgtgc
      241 aaggcctaga caaaacccca gccaatcatg tcgcgttatc tccgatatct tttatcgaac
      301 gcgccgcatt ggtgttccca gaaaaactgg ccattgtcca cggtgaatta cgtcagcgct
      361 ggggacaaac ctttgcgcgt tgtcgacaac tggcgagcgc cctgcaaaag cacggcatcg
      421 gtgtgggtga cacggttgcc gtgatgttgc caaacacgcc gcctatggta gaggcacatt
      481 ttggtgtgcc catggccggt gcggtactaa acagcctgaa cacccggctc gatgccaata
      541 gcattgcttt tatgctcaac catggtgaag cgaaattagt gatcgtcgac agcgagctcg
      601 cacctgtgat gcgcgaagca ctgacaatcc tgaagcaaga acatggtcga gagcccactg
      661 tcattgaagc gcatgatgag ccgtttgtgg cacctgacgg tattagtgaa gtcagttatg
      721 aagccttggt cgcccaaggt gatgccgatt tcgaggtcaa gctacccgaa gacgagtggc
      781 agtcaatctg cctgaactac acgtccggca ccaccggcga ccccaaaggt gtggtctata
      841 gccaccgcgg tgctgccacc aacgcaattt ccaacattct cgaatgggac atggcacgcc
      901 acccagtgta cttgtggacc ttgccgatgt ttcattgcaa cggctggtgt ttcccatgga
      961 cggtggccgc acgtgctggc gttaatgtct gtctgcgcaa ggtcgaggca cgaaccatct
     1021 ttgatctcat ccgcacccat ggtgtgacgc actattgcgc agcgcccatc gtgcatagcc
     1081 tgctgatcaa tgcgccagag gacatgaagg ctgacgtgcc cgcgggtgtt aaagccatgg
     1141 ttgccggcgc agcgccgcca gcagcgatga tcgaaggcat ggagaacatg gggtttgaat
     1201 taacccatgt ctatggtctg actgaggtgt atgggccagc tgccgtgtgt gtcaaacacg
     1261 aggactggga tagcctagac atctctgagc gtgcgcgcct gaactcacgc caaggtgtgc
     1321 gctatcacct gcaagccgat gtgcgtgtac tcgacccaca aaccatgcag cctgttcctt
     1381 gggacgggca aaccatgggt gaaatcatgt ttcgtggcaa catcaccatg aagggctact
     1441 taaagaaccc caaggccact gacgcggcgt ttgccggtgg ctggtttcat tcgggtgacc
     1501 tcgccgttca gtaccccgac ggctacgtca agatcaaaga ccgcagcaaa gacatcatca
     1561 tctcgggtgg ggagaacatc tcttccattg aagtcgaaga cattctctac cgtcaccctg
     1621 cggtgttggc tgcagccgtt gtggccatgc ctgaccccaa gtggggcgag acgccttgcg
     1681 ccttcattga gaccaagccc gatgccaacg tcacggaagg tgacatcgtg gctttctgca
     1741 aagaacatct ggcaaacttt aaagtgccta gggcggtgat attcggtgag gttcccaaaa
     1801 catccaccgg caagattcaa aagtttgaac tgcgcaagca agccggctca gccaaagcgc
     1861 tcgagagtta aaaacatact gacaaacatt cggcatttag gaggcaagca tgagtgattt
     1921 ggtgacacgg caagcggtca agcccggact cattcggctg acattaaacc ggcctgatgc
     1981 gtttaacgcg ttgtctgagg ccatgctcgc ggccttgcaa actgagcttg atgccgtcgc
     2041 tcgcgacgaa acgatcaaag tggtcattct ggccgctaca ggcaaagcgt tttgtgctgg
     2101 ccatgatcta aaggaaatgc gcgccgcacc ctctcaagac tattacgag
//
LOCUS       DATBNL010000382         1764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_94385, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000382 DATBNL010000000
VERSION     DATBNL010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94385"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..570
                     /locus_tag="VIC30_06570"
     CDS             19..570
                     /locus_tag="VIC30_06570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEY7804083.1"
                     /translation="MTNHGFALLQAAERLNEAKAITLAQIQAETSQSYETKDNKFQLS
                     GMGLRTSMRNQLPCKVHAIETTGGMARIWLELGDGQHLASKITSDSLELLDLRQGQPV
                     LALCKATAVTIAPSIVAMGEINTLKGRITKRLGLKRDGQLSMAVGPNLQLSGFVQVGS
                     DLKLKQSAMAAIAESAVVIALTD"
     gene            765..1484
                     /locus_tag="VIC30_06575"
     CDS             765..1484
                     /locus_tag="VIC30_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011828378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7804084.1"
                     /translation="MPSNNSRTEFIQTPPQATDRIVLAITRAIAHRRLMPGTKLTEQK
                     LCDIFNVSRTIVRQALNQLARDRLVSLEPDRGAFVAVPTSEEASQVFAVRAMLETMMV
                     RELCKQITARQIRQLRSHLVAERRALKRKDIAQRTHLLGQFHLILAQMHGNTVLYETL
                     GDLMLRCSLIALAYQSPQSAQASHAEHVALVDALESREAPAAVRLMKGHLQHVHHNID
                     VDHRNLESGQTLANALAGLTD"
     gene            1506..>1764
                     /locus_tag="VIC30_06580"
     CDS             1506..>1764
                     /locus_tag="VIC30_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase"
                     /protein_id="HEY7804085.1"
                     /translation="MNTSGNNPTHYPRDLIGYGRHRPDAKWPGGARVAVQFVLNYEEG
                     AENTVLHGDAGSEQFLSELFNPTAYAARHLSMESIYEYGSRA"
BASE COUNT          435 a          495 c          451 g          383 t
ORIGIN      
        1 tgaggcggcg gtgcgcgctt gacgaaccat ggctttgctc tgttgcaggc agccgagcga
       61 ttaaacgagg ccaaggccat cactttggca cagattcaag ccgaaacatc gcagtcttac
      121 gaaactaaag acaacaagtt ccaattaagt ggcatgggtt tgcgcactag catgcgcaat
      181 caattgccct gcaaagtaca cgcgatcgaa accaccggcg gcatggcgcg tatttggttg
      241 gaactaggtg acgggcagca cctcgcgtct aagatcacca gcgacagtct agaattactc
      301 gacctaaggc agggccaacc ggtgctggca ctttgcaagg caacggctgt gaccatcgcc
      361 ccctcaatcg tagccatggg tgagatcaat actctcaagg gccgtatcac caaacgactc
      421 gggctcaaac gcgatggcca attatccatg gccgtgggcc ccaacctgca gttatccggt
      481 tttgtgcagg tgggttcgga tctaaagctc aaacaatctg ccatggctgc cattgccgag
      541 tcggcggtgg tcatagcact gactgattga ttggctgact gatagattga ctagctcgtc
      601 ggctgtttgc tgtgacaaac gtctcgcggc ttgatcacgg caccgcaatg caggagcgac
      661 cgttggtgac gttgtataca atcaagaacc aatatcaaga aaatctcggt cgtatttgat
      721 cgatgttttt cgatgttttg tagatacctt tgcttgaaac atccatgcct agtaacaaca
      781 gccgaaccga attcatccag acaccgcctc aggcaactga tcggattgtg cttgccatca
      841 ctcgcgcgat tgcacatcgg cggttgatgc ctggcaccaa actgaccgag caaaagctgt
      901 gcgacatctt caatgtctca aggactattg ttcgtcaagc gttaaaccaa ctggctcgcg
      961 acaggctcgt gagcctagaa ccagaccggg gcgcttttgt ggctgtgcca acctccgaag
     1021 aagcctcaca ggtgttcgcg gtacgcgcca tgcttgagac catgatggtg cgtgagcttt
     1081 gcaagcaaat caccgcacga caaatacggc agttgcgctc ccatctcgtg gctgaacgac
     1141 gcgcactcaa gcgcaaagat atcgcgcaac gcactcatct gctcggccag ttccacttga
     1201 tcctcgccca aatgcatggc aataccgtgt tgtatgaaac gctcggtgac ctgatgctgc
     1261 gatgttcgtt aattgcgctg gcctatcaat cacctcagtc agcacaagcc tcacacgctg
     1321 aacatgttgc actcgtagat gcgctcgaaa gtcgcgaagc accagctgcc gttcgcctga
     1381 tgaaaggcca tctgcaacat gtgcatcaca acattgatgt cgaccaccgc aaccttgagt
     1441 ccggacaaac actggccaat gccttggctg gcctaaccga ttaacgtcta cgacaggtaa
     1501 ccacgatgaa taccagtggc aacaatccaa cgcattatcc acgtgaccta atcggttatg
     1561 gccgacaccg gcctgatgca aaatggccag gcggcgcgcg cgtggccgtg caatttgtct
     1621 tgaactatga agaaggcgca gaaaacaccg tcctgcacgg cgacgctggt agcgaacagt
     1681 ttctatcgga gctcttcaat ccaaccgcct acgccgcccg ccatttgtcg atggaaagca
     1741 tttatgaata tggttcgcgc gccg
//
LOCUS       DATBNL010000383         3743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_24545, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000383 DATBNL010000000
VERSION     DATBNL010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24545"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VIC30_06585"
     CDS             <1..251
                     /locus_tag="VIC30_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEY7804086.1"
                     /translation="FGESMFTCATNASKIALVHLVRFLQRQGVTMIDCQMQTEHLASM
                     GARNIAREVFIDHVSAATDAPPIDWHPGWLDTEGNHQP"
     gene            306..1049
                     /locus_tag="VIC30_06590"
     CDS             306..1049
                     /locus_tag="VIC30_06590"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEY7804087.1"
                     /translation="MSQIQELPFAAIQFYSTASYRCSYLPDEQARSQVAAPGHLIHAD
                     NYTELVQQGFRRSGVFTYRPHCDHCKACIPVRVDCAAFKPNRSQRRAAKAHRDLRAHI
                     MALGWSAEHFELYSRYQSARHPGGGMDEDSQAQYRQFLLASRVNSRLVEFRDGHGKLF
                     MVSIIDILEHGLSSVYTFYDPDQAGSLGTYGILWQIQQCQQMNLPWLYLGYWIKQSPK
                     MSYKSNFKPVQCLIDGQWQAMPTDTSAVK"
     gene            1054..2097
                     /locus_tag="VIC30_06595"
     CDS             1054..2097
                     /locus_tag="VIC30_06595"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEY7804088.1"
                     /translation="MSNLFKAYGLTKKVLFAMDPETAHNVTLATLQKTYDCNWTRRLT
                     ADMPSHPTQLMGLSLKNPVGLAAGLDKDGAHIDALGNLGFGFVEVGTVTPRAQPGNPK
                     PRMFRLPQAQALINRMGFNNHGLQQFIANVQRSRYRQTGGILGLNIGKNADTPIERAV
                     DDYLICLDGVYPHADYITVNISSPNTKNLRELQSGDALDDLLEAIDRRRDQLAQTHGK
                     RVPIALKIAPDVDAEQIHVISQALMRHHMDGVIATNTTVSRDKVQNLAHANEAGGLSG
                     APVHEMSLAVIAQLREQLGLDFPIIGVGGILSGQQAQEKITAGANAVQLYTGLIYEGP
                     ALIGQCVKAMARP"
     gene            2184..2510
                     /locus_tag="VIC30_06600"
     CDS             2184..2510
                     /locus_tag="VIC30_06600"
                     /inference="COORDINATES: protein motif:HMM:NF017007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEY7804089.1"
                     /translation="MNNDAYTLELLSIYRQVPDNQKSDFANRFNAQARNPVVIFGLSA
                     FLGYFGIDRFMLGQVLLGILKLITGGGFGVWYIIDLFLVAGTARDKNLEIARSVADIN
                     QPSLIR"
     gene            complement(2637..3218)
                     /locus_tag="VIC30_06605"
     CDS             complement(2637..3218)
                     /locus_tag="VIC30_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEY7804090.1"
                     /translation="MNTQMPKEMMESQKAALDAMMAVQGSVFNGFEKLVDLNLKVMKA
                     TMDEVSQKTQEAMGVKDAQEAVAMSSSMVQPSAEKAVAYSKHVYDIMAGVQADLAKLT
                     EGQMAESQKHMAEMVEQFSRNAPSGAEGTVAMLKSSLAQANAAYDSMSKAAKQAAEVA
                     EKNLHAATTTAFKAASDAAETAGKTTSRRRTSA"
     gene            complement(3365..>3743)
                     /locus_tag="VIC30_06610"
     CDS             complement(3365..>3743)
                     /locus_tag="VIC30_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HEY7804091.1"
                     /translation="IGGRAPLHLTSTGKLFLSVADPRQVRAYVTRTGLAGTTRNSITN
                     FEGLDRELALVRRHGYARDNEELEMGVRCIAAGIRDDTGRLVAGLSISAPTERMQDGW
                     VQQLVETARTISGALGFEPGRPS"
BASE COUNT          909 a         1086 c          925 g          823 t
ORIGIN      
        1 tttttgggga gtcgatgttc acctgcgcca ccaacgcttc taagatcgcc ttggttcatc
       61 tggtgcgttt tctgcagcga caaggtgtca ccatgatcga ctgccagatg cagaccgaac
      121 acttggcctc aatgggtgcg cgcaacatcg ctcgcgaagt ctttatcgat catgtgagcg
      181 ccgccaccga cgcaccccca attgactggc acccgggatg gctagacacc gaaggcaatc
      241 accaaccttg atctgcctga ggaaacccgg cgcaaaccga tgcgtttcag gtacgataga
      301 ttcccatgag ccagatacag gaactgccct ttgcggccat ccagttctat agcaccgcaa
      361 gctatcgttg cagctacctg cccgatgagc aggcgcgctc gcaagtggcc gcacccgggc
      421 atttaattca cgccgacaac tacaccgagc tggtgcaaca ggggtttcga cgcagcgggg
      481 tctttaccta ccgaccgcac tgcgaccatt gcaaagcatg cattccggtg cgcgtcgatt
      541 gcgccgcctt caaacccaac cgcagccaac gccgtgctgc caaagcacat cgcgatctgc
      601 gtgcccacat catggcgctt ggctggtcag ccgagcactt tgagctctac agtcgctatc
      661 aaagcgcgcg tcatccgggc ggtggcatgg atgaagacag tcaagcgcaa tatcgccagt
      721 ttttactggc cagccgagtc aactctcgtc tggtggagtt tcgtgacgga catggcaagc
      781 tctttatggt gtcgattatc gacattctgg aacacggact gtcatcggta tataccttct
      841 acgaccctga tcaggcaggc agcctgggga cttacggtat tttgtggcaa atccagcagt
      901 gccagcaaat gaatctgccc tggctttatc taggctactg gatcaagcaa agccctaaaa
      961 tgagttacaa gtccaacttc aaaccagtcc agtgcctcat tgatgggcaa tggcaagcga
     1021 tgcccaccga tacaagcgcc gtcaaataaa cacatgagca acctgttcaa agcctacggg
     1081 ctgaccaaga aagtcctgtt tgccatggac ccggagacgg cgcacaacgt cacgttagcg
     1141 accctacaaa agacctacga ctgcaactgg acgcggcgtc tgaccgcaga catgcctagc
     1201 caccctaccc aactgatggg actgtcctta aaaaacccgg ttgggctggc tgctggacta
     1261 gacaaagacg gtgcccacat cgatgcattg ggcaacctag gctttgggtt tgtagaggtg
     1321 ggtacggtca cgccacgcgc gcaacccggc aaccccaagc cgcgcatgtt tcgcttgccc
     1381 caagcacagg ccctaattaa ccgcatgggg tttaacaatc acgggctcca acagttcatt
     1441 gccaacgtcc aacgcagccg ctaccggcaa accggtggca ttctcggact gaacatcggc
     1501 aagaacgccg acacgccgat tgaacgagca gttgacgact acttgatctg cctagacggt
     1561 gtatacccac acgctgatta catcaccgtc aacatctcct cgcccaacac caaaaaccta
     1621 cgtgaactgc agtccggtga tgcactcgat gacttattag aagccattga ccgcaggcgc
     1681 gatcaactcg cccagacaca tggcaagcgt gtgccaattg cattaaagat cgcacccgac
     1741 gttgatgctg aacaaattca tgtcatcagc caagccttga tgcgtcacca catggatggc
     1801 gtgatcgcca ccaatacgac agtctctcgc gacaaagtcc aaaacttggc ccacgccaat
     1861 gaagcgggcg gcctgtcagg tgcgcccgtc catgagatgt cgcttgcggt gattgcgcag
     1921 ctgcgtgagc aactcggcct ggatttcccg atcattggtg tgggcggaat cctgtctggc
     1981 cagcaagcac aagaaaaaat caccgccggc gccaatgcgg tgcaactcta caccggcctg
     2041 atctacgaag ggccagcgct tattggccag tgcgttaagg caatggcacg gccttaatct
     2101 atcaatgccc taaggcatca tcaacaccaa caagcaacaa accgcaacca acaaacaaca
     2161 aaccccagcc acacagcatc cacatgaaca acgacgcgta cacactcgag ctactgtcca
     2221 tttacagaca agtgccagat aaccaaaaaa gtgatttcgc caatcgattt aacgcacaag
     2281 cccgaaatcc cgtggtgata tttggtctat cagcgtttct gggctacttc ggtatcgacc
     2341 gcttcatgct cggacaagta ttgctcggaa tcctgaaact gatcaccggt ggtggatttg
     2401 gggtttggta catcattgat ttgttcttgg tggcaggcac tgcgcgcgac aagaacttgg
     2461 agatcgcccg gtcagtagcg gacatcaacc aaccttcact gatacgctaa taaaccaacg
     2521 ccagcaatgc aggctgagct ctaaagtttt ctccagacgt taaaacgcca ccgagcagtg
     2581 atgccaggtg gcgttttaac gtctctgagt ctagcgactc agcgtgacct caaaccttag
     2641 gctgaggtac gacgacggct ggtggtctta cctgccgttt cggctgcatc tgaagctgct
     2701 ttgaaagcag tcgtggtggc agcatgcagg ttcttctcag caacttcagc agcttgcttg
     2761 gcagctttgg acatgctgtc gtaagcggcg ttggcttgag ccagtgaaga cttgagcatg
     2821 gcgaccgtgc cttcagcacc tgacggtgcg ttgcgcgaga actgctcaac catctcagcc
     2881 atgtgctttt ggctctcagc catttgacct tcggtcaact tggccaagtc agcttgaacg
     2941 ccagccatga tgtcataaac atgcttgctg taagcaacgg ctttctcagc tgaaggctga
     3001 accattgaag agctcatggc aacagcttct tgtgcatctt taacgcccat ggcttcttgc
     3061 gtcttttgtg agacttcgtc catggtggct ttcatgactt tcaggttcag gtcaacgagc
     3121 ttttcaaagc cgttgaaaac gctgccttga acggccatca tggcgtcaag agcggctttt
     3181 tgggattcca tcatttcttt aggcatctgc gtgttcatct ttaatctcct atcaggggta
     3241 aatgttgcgc tgcacaattt aaatttaacc cgcgcaatat gtcatgtcaa cactttttga
     3301 gatttttttg ttgcgttgca acaaaaagac acaattgccg ccaaaatttc acattaacag
     3361 ctggttaact agggcggcct ggctcaaatc caagcgcacc agagatcgta cgggccgttt
     3421 caacaagctg ttgtacccag ccatcttgca tacgctcagt tggtgccgag atcgacaaac
     3481 ccgccaccaa tcggccggta tcatcgcgaa tacccgcagc gatgcaccgc acgcccatct
     3541 cgagctcttc gttgtcacgt gcatagccgt ggcgcctgac caaagccaac tctcggtcca
     3601 agccttcaaa gttggtaata ctgttgcgcg tggtgccggc taaacccgtg cgtgtgacat
     3661 aagccctgac ctgccttggg tcagccaccg acaaaaacaa tttacccgtc gaagtcaggt
     3721 gcagtggcgc acgcccacca atg
//
LOCUS       DATBNL010000384         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_54601, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000384 DATBNL010000000
VERSION     DATBNL010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54601"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..441
                     /locus_tag="VIC30_06615"
                     /pseudo
     CDS             1..441
                     /locus_tag="VIC30_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011805493.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
     gene            complement(450..1529)
                     /locus_tag="VIC30_06620"
     CDS             complement(450..1529)
                     /locus_tag="VIC30_06620"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011491680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HEY7804092.1"
                     /translation="MTKTYRIATIPGDGIGKEVIPQGQRVLQVLQAMAKQQGGTAFEF
                     QTFDWGGDYYREHGVMMPDDGVEQLKPFDAILFGSAGDPDIADHITLWGLRLKICQGL
                     DQYANVRPTRVLPGIDAPLKRCAPGDLDWVIVRENTEGEYAGVGGRVHQGHPIEVATD
                     VSMMTRAGVTRILTYAFELARTRPRKHLTVVTKSNAQRHAMVMWDEIAAQVAQDYPDV
                     TWDKELVDAATARMVNNPKSIDTMVASNLHADILSDLAAALAGSLGIAPTGNIDPERR
                     YPSMFEPIHGSAFDIMGQGLANPIGTFWSVVMMLEHLGEDHMASQLMAAIEFVTADPA
                     NHTKDLGGAATTESVTAAVINALAA"
     gene            1642..>1997
                     /locus_tag="VIC30_06625"
     CDS             1642..>1997
                     /locus_tag="VIC30_06625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804093.1"
                     /translation="MLRNFLRRFDQLRRQQTQGVSAWLYGLMGRDAVLLNERLPADQV
                     KRILVVRNNKRIGNMYFLLPFLNQLREAYPDANIDLMVISDSHARIFQAMSLNRIWVS
                     HFAFATALTCFKTLRQ"
BASE COUNT          453 a          566 c          522 g          456 t
ORIGIN      
        1 taaggcattg aaacactggc gctacgcatg gatcgaacct gcgagaatgc gttggccatt
       61 gcgcaatatc tcaaagccca tcccaaggtc gcttccgtcc agtacgctgg tttgcctgac
      121 caccccgacc acgagatcgt caaacgccaa atgaacggca aggcatccgg tattttgtcg
      181 ttcgatctca aaggcgctga tggccaaggt cgcgaagccg gtgcgcgctt ccttgatggg
      241 ttgaatctat tcacccgctt ggtcaatatt ggtgatgcaa aatcgttggc tacccacccg
      301 gcttcgacca cgcaccgcca gctcgatccg gcggagcttg ccaaggctgg cgtctcagaa
      361 ggcatggtgc gcttgtcttt gggcattgag cacatcgatg acttgaaggc cgatcttgag
      421 caggccttag cgcaggtcta agcgcaagtc taagcagcca gcgcgttgat caccgcggcc
      481 gtcaccgatt cggtggtggc cgcaccacca agatccttgg tgtggttagc aggatcagcg
      541 gtcacaaatt caatggcagc cattaattga ctagccatgt ggtcctcgcc gaggtgctct
      601 agcatcatga ccaccgacca gaacgtgccg atcggattgg ccaacccctg ccccatgatg
      661 tcaaatgccg aaccatgaat cggctcaaac atggacgggt agcgtcgctc tggatcgatg
      721 ttgccagtcg gtgcaatacc gagactgccc gccaacgccg cagccagatc actcaaaata
      781 tcagcatgca ggtttgaggc caccatggtg tcaatcgact tcgggttgtt taccatgcgc
      841 gccgtagcag catctaccag ttccttgtcc cacgtgacat cggggtagtc ttgtgcgact
      901 tgcgcagcaa tctcgtccca catgaccatg gcgtggcgtt gtgcgttgga tttggtaacc
      961 acagtcaagt gcttgcgtgg ccgtgtgcgc gccaactcaa acgcatatgt caggatgcgc
     1021 gtgacgccag cacgcgtcat catgctcaca tcggtggcca cctcaatcgg gtgaccttga
     1081 tgcacacggc cacccacacc ggcatattca ccctcggtgt tctcgcgcac gatgacccag
     1141 tctaggtcac caggtgcaca acgcttaagc ggcgcatcaa taccaggcaa aactcgggtc
     1201 gggcgcacgt tggcgtattg atccaggcct tggcaaatct tcaggcgcaa cccccagagc
     1261 gtgatgtggt cggcaatgtc aggatcacca gccgacccaa acaagatcgc atcaaacggc
     1321 ttgagttgct caacaccatc atcgggcatc atgaccccgt gctcacggta gtagtcacca
     1381 ccccagtcaa aggtttgaaa ctcaaaagcg gtgccccctt gttgtttggc catggcttgc
     1441 aacacttgca gcacgcgctg cccttgcgga atgacttctt tgccaatgcc atcaccgggg
     1501 atggttgcga ttctgtaggt ttttgtcata cgaaaaaata tacgtttgat ggaaacatgc
     1561 acaaagtagc gttcagaaca actatagcag tgcgcgtctg gtgtactaag atactgcctt
     1621 agctcaactg cgattgcctg gatgctcaga aactttctgc gtcgatttga tcaactccgt
     1681 cgtcaacaga cgcagggcgt gagcgcgtgg ctgtatggct tgatgggtcg cgacgcggtt
     1741 ttgttaaacg aacgtctacc ggcggatcag gtcaagcgta ttttggtggt gcgcaacaac
     1801 aagcgcatcg gcaacatgta tttcttattg ccttttttaa atcagctaag agaagcctac
     1861 cccgatgcca acatcgattt gatggtgatc tctgactcac acgctcgcat atttcaagca
     1921 atgtcactga accgtatctg ggtgtcacac tttgcgtttg ccacggcact gacttgcttt
     1981 aaaacgctac gccaatg
//
LOCUS       DATBNL010000385         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_14887, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000385 DATBNL010000000
VERSION     DATBNL010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14887"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..925
                     /locus_tag="VIC30_06630"
     CDS             83..925
                     /locus_tag="VIC30_06630"
                     /inference="COORDINATES: protein motif:HMM:NF040375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HEY7804094.1"
                     /translation="MAVQISNAFVTLFDSEVKQAYQGQRLLAGITRERTGVEGSTVKF
                     PKIGKGSATIRVPQTDVTPLNVSYSQVTATMEDYIAAEYSDIFNQQKVNFNERQELVQ
                     VVSGAIARRMDQIVLDALAASSTSNTVGNDIGGTDSNLNIEKLREAKKLLDANNVPME
                     GRSILIHANSLSSLLGETEVTSADFNTVRALVTGDINTFMGFRFVTFGDRDEGGLPID
                     GSSDRTLYAFHRDALGLGIGMNQTSRVDYIAEKTSFLVASMFSAGAVAIDDEGIVKIT
                     CREA"
     gene            939..1220
                     /locus_tag="VIC30_06635"
     CDS             939..1220
                     /locus_tag="VIC30_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804095.1"
                     /translation="MAFSKDNFQPIGGQSKAGNAPQMWSYTAPGTDALADINTEGYFN
                     AVADLLKVGDLIYVSDTSVPTASLVVVLSNTGTVVDVSDGTAIAVTDAD"
     gene            1436..1885
                     /locus_tag="VIC30_06640"
     CDS             1436..1885
                     /locus_tag="VIC30_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804096.1"
                     /translation="MKKVQLARLTETPVNEWKYLYQLPGDTLSGVKAVFNSNSPGIRP
                     ISYGWEIIGNRLQTNEENIWVDYQFAPNESALPTYFVQLLKYAMAAEIAEAVTDQITK
                     ADYFERKAYGAPEQNRRGGYMRVAMNIDGASKSIEKIEDYSLISVRA"
     gene            1882..>2100
                     /locus_tag="VIC30_06645"
     CDS             1882..>2100
                     /locus_tag="VIC30_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804097.1"
                     /translation="MSRIIRVQTNFTSGELDPKLRARIDLQQYYNGLETAQNIVVQPQ
                     GGIARRDGTRYIATLPSSAGTAVRMVHFE"
BASE COUNT          527 a          514 c          535 g          524 t
ORIGIN      
        1 cggcgacctg actgatgcgg cccacacgga taaccgatac aggttttacc cttaaagaaa
       61 ttttttgatt ggagaaagta caatggcagt acaaatttca aatgcctttg taaccttgtt
      121 cgactcagag gtaaaacagg cttaccaagg gcagcgtctc ttggccggta ttactcgtga
      181 gcgcacaggt gtcgaaggtt ctacagtaaa gttccctaag atcggcaaag gttctgcgac
      241 tattcgcgta cctcaaactg atgtaactcc gctgaacgtc tcttactcgc aggttactgc
      301 gacgatggaa gactacatcg ctgcggaata ctcagacatc ttcaaccagc agaaggtcaa
      361 cttcaacgag cgtcaagagc ttgtacaggt tgtatctggc gctatcgcac gtcgtatgga
      421 tcagatcgta ttagacgcac ttgctgcatc ttctacttct aacactgtcg gcaacgacat
      481 tggtggcact gattcaaacc tcaacatcga gaagctgcgc gaagcgaaga agttgctcga
      541 cgcgaacaac gtacctatgg aaggtcgctc aatcctgatc catgcaaaca gcttgtcttc
      601 tttgctgggt gagactgagg tgacttcagc tgacttcaac acagttcgtg ctttggtcac
      661 tggcgacatc aatacgttca tgggcttccg tttcgtcact ttcggtgatc gcgacgaagg
      721 cggcttgcca atcgacggtt cttctgaccg taccctgtat gcgttccatc gtgacgcact
      781 tggtcttggc atcggcatga accaaacttc gcgtgttgac tacattgctg agaagacttc
      841 tttcttggtt gcgtcaatgt tctcagctgg tgcggtagcg attgatgacg aaggtatcgt
      901 caaaatcact tgccgtgaag cataaggagg aatgacaaat ggcattttct aaagacaact
      961 tccagccaat cggcggtcag tctaaagcag gtaatgcacc acaaatgtgg tcatacactg
     1021 cacctggcac tgacgctttg gcagacatca acacagaagg ctacttcaat gctgtagctg
     1081 acttgttgaa agttggcgac ctgatctatg tgtctgacac aagcgtacca accgcatctt
     1141 tggttgttgt gctgtccaac actggaacag tagttgacgt gtctgacgga acagcaatcg
     1201 ctgtaaccga cgctgactaa acgaatcggc tcccctccgg gggagccttt tctaatgagg
     1261 tgacgcaatg gcatcgggcg atacaaaact gtccatctgt tcggacgcac taattctctt
     1321 aggggcatcg cctctttcgt cgttttcaga gggcacagac gcagcgcaga tttgcgaccg
     1381 tttgtacgac gacctcaaag attctttgat tgcatcttat ggatggtctt ggtccatgaa
     1441 gaaggtgcaa cttgctcggt tgactgagac acctgtcaac gagtggaaat atctatatca
     1501 actgcctggc gacacattgt caggagtcaa agcggtattc aactcaaact cccctggcat
     1561 tcggccaatt tcatacggct gggaaatcat tggaaacaga ttgcagacca atgaggaaaa
     1621 catctgggtt gattatcagt tcgcgccgaa tgagtcggct ttgccaacat attttgtgca
     1681 gctgctgaag tatgcaatgg ctgcggaaat tgccgaggct gtgactgatc agatcacaaa
     1741 agcagattac tttgagcgca aggcttacgg agcccctgag caaaaccgcc gcggtggcta
     1801 tatgcgtgtt gcgatgaaca ttgacggcgc gagcaagtcg attgagaaga tcgaagacta
     1861 ctcgcttatc tcggtgcgcg catgagccgg attattcggg tacagacaaa ctttacgtct
     1921 ggcgaactag acccgaagct gcgtgcgcgt attgatctgc agcagtatta caacggtctt
     1981 gagactgcac aaaacattgt agtgcagcca caaggcggta tcgctcgccg cgatggcact
     2041 cgctacattg cgacgctgcc atcatctgct ggcaccgcgg tgcggatggt gcactttgag
//
LOCUS       DATBNL010000386         2639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74581, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000386 DATBNL010000000
VERSION     DATBNL010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74581"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /locus_tag="VIC30_06650"
     CDS             <1..570
                     /locus_tag="VIC30_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804098.1"
                     /translation="ADLAKLDTLHSIANEAISAFGDIDILVNAAGVNLREPIDEVTPQ
                     SWELQLALHLGAPFFLSQALCPAMRERGWGRVLNIASLQSYRAMPNSAPYGAGKGGIV
                     QLTRAMAQAWSPFGINCNAIGPGFFPTALTAPVFGNETLANSHAQQTCIGRNGELTDL
                     HGPAVFLCSDASKYVTGQTLMVDGGYTAR"
     gene            611..1612
                     /locus_tag="VIC30_06655"
     CDS             611..1612
                     /locus_tag="VIC30_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018912261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY7804099.1"
                     /translation="MKALVYTQPKELVLQDLAVPELQDDEVVLGIEAVGICGSDMHAW
                     HGHDPRRKPGLVLGHEFVGRVLESAAPGFDVGTRFTGNPLITCGVCEYCVQGRNNLCS
                     NRTMVGMTRPGAYAERMSIPVSSLIAIPQDMAAEVAALTEPAATAWHAVNLTIQALHR
                     PIHEASVLVIGGGAIGMLGALMLKHLGVKHLTVSELNPGRRAAVARAVGCDVIDPSQS
                     PPPESAYDHVMDAVGAKITRNQAINSIKPGGVVMHVGLQDWASEIDMRKLTLSEITLL
                     GTYTYTTADLRATVEALDGGVFGDLAWVEQRPLSEGQKAFLDLDSGASASSKIILRP"
     gene            complement(1625..2392)
                     /locus_tag="VIC30_06660"
     CDS             complement(1625..2392)
                     /locus_tag="VIC30_06660"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY7804100.1"
                     /translation="MKLHVLSDLHLEFTHWQPPATDADVVVLAGDIAIGVDGLRWAAT
                     HFEDKPIIYVAGNHEYYGGRFDAVLDELRQVSAELGIFFLENSDVVLTDRTGEKVRFL
                     GCTLWTDFLLFGPAMRTLCLNAARRALNDFRCIEHDGLSLLPEQTMQWHEQHIQWLST
                     RLKAPFEGKTVVVTHHLPSAGSVAPRYKFDHLSACFASELDQLFGPMVAWIHGHTHDS
                     FDYQHGGTRVVCNPRGYTSGRSLPENVHFNPTLVIEI"
BASE COUNT          652 a          720 c          698 g          569 t
ORIGIN      
        1 gcagacttgg ccaagctcga caccttacac agcatagcaa acgaagccat cagcgcgttt
       61 ggagatattg atatccttgt caatgccgcg ggcgttaact tgagagaacc catcgatgaa
      121 gtgacacccc aatcatggga actgcagctg gctctgcatc tgggcgcccc cttcttttta
      181 agtcaagcac tttgcccagc catgcgtgag cgcggctggg gacgggtgct caacattgca
      241 tcgctacaaa gctatcgcgc catgcccaac agtgcgccct atggcgctgg caaaggtggc
      301 attgtgcaac tgacgcgcgc catggcacaa gcttggtcac cttttggtat taactgtaat
      361 gccatcgggc caggcttctt tccgaccgca ttaactgccc ctgtgtttgg taacgagact
      421 ttggctaact cgcatgctca gcaaacctgc atcgggcgca acggcgagct tacagattta
      481 catgggcctg cggtgtttct atgtagtgat gcatccaaat acgtaaccgg acaaacctta
      541 atggtcgatg gtggatatac cgcacgctag agcccatttg actgaaccga cagaaatcag
      601 agacaacacc atgaaagcac tcgtttacac ccagcctaaa gagctcgttt tacaagatct
      661 tgccgtgcct gaactccaag acgacgaggt tgtacttggc attgaagccg ttggcatctg
      721 tggttctgac atgcatgctt ggcacggcca tgacccacga cgtaagccag gactggtgct
      781 cggccacgag tttgttggac gcgtgctgga gtctgcagca cctgggtttg acgttggcac
      841 gcggttcacc ggtaacccgt tgattacctg cggcgtttgc gagtactgcg tgcaaggacg
      901 taacaacctg tgttcaaacc gcaccatggt cggcatgaca cgaccgggtg catacgccga
      961 gcgcatgagt atccccgtct cttcattgat cgcaattcca caagatatgg cagcagaagt
     1021 ggctgcatta actgagcctg cagcaacggc ctggcatgcc gtgaatctga ccattcaagc
     1081 attgcatcgt ccgatacacg aggcaagcgt gctggttatc ggtggtggag ccatcggcat
     1141 gctgggtgcg ctcatgctca agcatctcgg cgtcaaacac ctgacggtga gcgaacttaa
     1201 cccgggccga cgtgcagccg tggcccgagc ggttggctgc gacgtcatag acccgagcca
     1261 gagccctcca ccagagtcgg cttacgacca cgtcatggat gcggttggcg ccaaaatcac
     1321 acgcaaccaa gccatcaaca gcatcaaacc gggcggtgtg gtgatgcatg ttgggcttca
     1381 ggactgggcc agtgaaattg atatgcgtaa gctcacgcta tcggaaatca cgctattggg
     1441 tacatacacc tatacgacag cagatctgcg tgccacggtc gaagctttgg atggtggtgt
     1501 gttcggtgac ttggcctggg tcgagcaacg acctctgtca gaaggtcaga aggcattcct
     1561 cgatctcgat agcggcgcga gtgcatcgtc gaagattatt ctgcggcctt aaagcacgga
     1621 ttcatcagat ttcaatcacc aaggtaggat tgaaatgcac gttctcgggc aacgaacgac
     1681 ctgaggtata gccgcgcgga ttgcaaacca cacgggtgcc gccgtgctgg tagtcgaatg
     1741 aatcatgcgt atgaccatgg atccacgcaa ccatggggcc aaacagctga tcaagctctg
     1801 aggcaaaaca agcggacaag tgatcaaact tatagcgcgg tgcaaccgaa ccggcgctag
     1861 gaaggtgatg tgtgaccacc acagttttac cttcaaacgg tgcctttaag cgagtgctca
     1921 accactgaat gtgctgctcg tgccattgca tggtttgttc tggcagcaag gaaagaccat
     1981 cgtgctcgat gcatcgaaag tcgttgagtg cgcggcgagc agcattcaag cacagtgtgc
     2041 gcatggctgg accaaacaac aaaaagtctg tccaaagtgt gcaaccgagg aaccgaacct
     2101 tctcacctgt gcgatcggtg agcaccacat ctgaattctc aagaaagaag atgccaagct
     2161 cagccgacac ctggcgcaac tcatctaata cagcatcaaa cctgccgccg taatactcgt
     2221 ggttgccagc cacataaatg attggtttat cctcgaaatg cgtcgccgcc caacgcaaac
     2281 cgtccacacc gatggcaatg tcacccgcta acaccaccac atctgcgtcg gttgctggcg
     2341 gctgccaatg cgtgaattcc aaatgcaaat cacttaagac gtgtagtttc atgagacctt
     2401 gccgttccaa tgattggtgt cgcaaagcta aaattgtaga agcgtgtgca gcccaaggat
     2461 ctgatttaga accgcgtctg acgaacattc ttcacactcg ggtttacacc gaatacccct
     2521 accccaacac ggtgacgtgt gataggtgtt tgccgaaaca cagcccaatg cgtaccgcaa
     2581 aacgaccccc acgatgaccg ctcggtgcag gtgatttttg agtgactgtc ttaagaaat
//
LOCUS       DATBNL010000387         2429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124320, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000387 DATBNL010000000
VERSION     DATBNL010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124320"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1262
                     /locus_tag="VIC30_06665"
     CDS             93..1262
                     /locus_tag="VIC30_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010813145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEY7804101.1"
                     /translation="MTIRDKAFIVGAYEHPTRKAPDRSVAQLHAECAKGALEDAGLSL
                     DDVDGYFCAGDAPGLGMLSMADYMGLRNLRHVDSTETGGSSYLVHVSHAAQAIAMGKC
                     DVALITLAGRPRSAGSSGLQPRNWGADVPDAPFEAPFGTVTVNSYAMVAQRHMYEFGT
                     TLEQLAWIKVAASHHAQHNPNAMLKDVVTVEDVMNSPVVASPLRRFDCCVVSDGGGAL
                     IVARPEIAKRLKRPLVGIRGAGEAVKGQLGGEVDLTYSAARFSGPRAFEEAGVTQADI
                     KYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHP
                     ANRGGITKVIEAVRQLRGEAHPAVQVPNCDLALAHGTGGLLGSRHGSATLILERQ"
     gene            1265..1669
                     /locus_tag="VIC30_06670"
     CDS             1265..1669
                     /locus_tag="VIC30_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008651474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEY7804102.1"
                     /translation="MTKPYEPNPIPAPTIEPGTEHFWEQAKAGMLTVKSCKSCGKLHW
                     YPRTLCPFCMGQTEWKAVSGKGKIYSFSVMQRGNPNPYCIAYVTLDEGVTMMTQIVDC
                     DLDSVAIAQAVELVFKPTEGEDTPPVPMFKPV"
     gene            complement(1722..>2429)
                     /locus_tag="VIC30_06675"
     CDS             complement(1722..>2429)
                     /locus_tag="VIC30_06675"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY7804103.1"
                     /translation="QLDVYVEVEVGGQRCGAVAELVPELVDAILANSGLRFAGLHCYH
                     GAAQHYREDSERQQAINKTSQTVEQAVAALKTRGVVVPCVTGAGTGTFWLERDSGCFT
                     EIQPGSYALMDRDYADNAVGPDDVRFEHALFIKSSVTSVSHASFAVVDAGLKSLSVDS
                     GMPGIYQGQGLSYQKASDEHGVVTLGSAQPLVLGQTVWLIPGHCDPTVNLYDDLIVVS
                     NGQVVDMWPITARGASL"
BASE COUNT          562 a          709 c          631 g          527 t
ORIGIN      
        1 agcgcgccaa gatgctaaaa acaattcaag cgctgtgatc tgactctgtc gggctcatag
       61 caacgattga caataaccct atggcggatc gaatgaccat aagagacaaa gccttcattg
      121 tgggtgctta cgagcacccg acccgcaaag cgccggaccg ctcagttgcg caactgcatg
      181 ctgaatgcgc caaaggcgcc ctcgaagatg ccggactgtc actagatgac gtggacggct
      241 acttttgtgc cggtgatgcg cctggacttg gcatgctgag catggctgac tacatgggct
      301 tgcgcaacct gcgccacgtt gactctactg aaaccggcgg atcttcatat ctggtccacg
      361 tctcacacgc agctcaggcc attgccatgg gcaaatgcga cgttgccctc attacgctcg
      421 cgggccgtcc ccggtcggcc ggttcatcgg gattgcagcc acgcaattgg ggtgctgatg
      481 tgccagatgc accgtttgag gcgccatttg gcaccgtcac ggtcaatagc tacgccatgg
      541 tcgcacagcg tcacatgtat gagtttggca ccacgcttga gcaactcgcc tggattaagg
      601 tggctgcttc gcatcacgcc caacacaacc ccaacgccat gcttaaagac gtggtcacgg
      661 tcgaagatgt gatgaactca cctgtggtgg cctcaccttt gcgccgtttt gactgctgtg
      721 tggtcagtga tggtggcggt gccttgattg tggcgcgccc agagatcgcg aagcgcctaa
      781 agcggccgct cgtagggatt cgaggcgctg gcgaagcggt caagggccaa cttggtggcg
      841 aggtggatct aacctattca gcggcacggt tttctgggcc gagggccttt gaggaagccg
      901 gcgtcacgca ggcagacatc aagtacgcat cgatttatga cagcttcacc atcacggttt
      961 taatgcaact cgaagacctt ggcttttgca aaaaaggcga aggtggcaag tttgtagctg
     1021 acggtaattt gatttctggt gtgggcaaac taccctttaa cactgacggc ggtggtctgt
     1081 gtaacaacca ccccgccaac cgcggtggca tcaccaaagt cattgaggcc gtgcgtcaac
     1141 tgcgtggcga agctcacccc gctgttcaag tgcccaattg tgatttggcg ctagcccacg
     1201 gcacaggcgg actccttggt tcgcgccacg gcagtgcaac cctgattttg gagcgtcagt
     1261 gatcatgaca aaaccatatg aacccaaccc cattcccgca cctaccattg aacccggcac
     1321 cgagcacttt tgggaacaag ccaaggctgg catgctcaca gttaaatctt gcaagtcttg
     1381 cggcaagctg cattggtacc cgcgcacgct ttgtccgttc tgcatgggtc aaaccgaatg
     1441 gaaagcggtc tcaggcaagg gcaagatcta cagtttcagc gtgatgcagc gaggcaatcc
     1501 caacccatac tgcatcgctt atgtcacgct tgatgagggc gtcacgatga tgacgcaaat
     1561 tgttgactgc gatcttgaca gtgttgccat cgcccaagcc gttgagcttg tcttcaaacc
     1621 caccgagggt gaagacacgc caccggtacc gatgtttaaa ccagtctaaa tacgttcact
     1681 gcacgggcgc gagtctgagc gtctgttcaa gtgcgagtct gtcaaaggct cgcgcctcgt
     1741 gcagtaatcg gccacatatc aacaacctgc ccgtttgata cgacaatcaa gtcgtcgtac
     1801 aaattaacgg ttgggtcaca atgacctgga atcaaccaca cggtctgccc tagcaccaag
     1861 ggctgcgccg agcccagtgt caccacgcca tgctcatcag atgctttctg ataactaagc
     1921 ccctgccctt gataaatacc cggcatgccg ctatcgacac ttaaggactt aagccccgca
     1981 tcgacaaccg caaaactcgc gtgcgacacg cttgtgactg agctttttat aaacaacgca
     2041 tgctcaaatc tcacatcgtc tggcccaacc gcgttgtcgg cataatcccg atccattagc
     2101 gcgtaagatc caggttggat ttcagtaaaa cacccagagt ctcgctccaa ccaaaacgta
     2161 cccgtcccag cgccagtcac acacggcaca acaacccctc gtgttttaag tgctgccacg
     2221 gcctgctcta ccgtctggct tgtcttattg atcgcctgct ggcgctcgct atcttcgcgg
     2281 tagtgttggg cagcaccgtg atagcaatgt aagccagcaa agcgcaagcc tgaattggcc
     2341 aaaatggcat ccacaagttc gggcaccaat tcagctaccg caccgcagcg ttgcccacca
     2401 acttcgactt cgacatagac atctaactg
//
LOCUS       DATBNL010000388         1833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74596, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000388 DATBNL010000000
VERSION     DATBNL010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74596"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VIC30_06680"
     CDS             complement(<1..372)
                     /locus_tag="VIC30_06680"
                     /inference="COORDINATES: protein motif:HMM:NF022514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2863 family protein"
                     /protein_id="HEY7804104.1"
                     /translation="MRKKLPTSKLPRAVNHVLASLRASFPSASRFEDRFWQSHLEQLI
                     QSHLSAGQDDVIESTLTELATIDTDQAHEWLEHVQAASQSLNIEIDGQKRQVLLVTSA
                     FSVWTRYQLPQVALTKDDEAYL"
     gene            complement(404..1279)
                     /locus_tag="VIC30_06685"
     CDS             complement(404..1279)
                     /locus_tag="VIC30_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY7804105.1"
                     /translation="MTPDQLITFSVVAEHGNISQAARAMHLSQPAVSGQLQALQQAFG
                     EALYRRQGRGVALTPAGERLLVPAQRLRAAMQAALDERQLNQTLASGTLRIGASTTPA
                     SYLLPEAVAHFKQQHPGIDVQMIAGNTGEIVGRLSELDIAIVEGELNEATLSQCQVLP
                     WQTDEVVAIMCRSHQLANRASVELAELATQSLVMREDGSGVRNLVIKAFAELGLPVTG
                     YLELAGVEGIKQAVRAGLGVGFVSQLSLGHEDGTLVGVRVNPGLARSIRVVLPRSVKP
                     SKATQAFMGTLGCPR"
     gene            1472..>1833
                     /locus_tag="VIC30_06690"
     CDS             1472..>1833
                     /locus_tag="VIC30_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEY7804106.1"
                     /translation="MTTVAATSETVWRDRTSGVLFVALMAFAVFELAKWAPIRALSIS
                     PLVLGIVCGMLYGNLMRGTMPVEWGVGVNFSARRLLRIAVALYGLNISIQQIIDVGVP
                     GIVVSLGVAVGVLAAGTWL"
BASE COUNT          426 a          467 c          521 g          419 t
ORIGIN      
        1 cagataagcc tcatcgtctt tggtcagtgc cacttgtggc agttggtagc gggtccagac
       61 tgaaaatgcg ctggtcacga gcagcacctg ccgcttttgt ccatcaattt cgatgttcag
      121 gctttggctg gcggcttgca catgctcaag ccattcatgc gcctgatcgg tgtcgatggt
      181 ggcaagttcg gtgagcgtgg attcgataac gtcgtcttgt cctgcactta ggtgtgactg
      241 gatcaactgc tcgaggtgcg actgccagaa acgatcttca aatcggctgg cggacggaaa
      301 cgaggcccgc agcgatgcca atacgtgatt gaccgcacgg ggcagtttgg aagttggcag
      361 ctttttgcgc ataacgtaag cctgaaacga ttaacccacc attctagcgt ggacagccca
      421 aggttcccat gaacgcctgt gtggctttcg atggcttaac agaacggggc agtacgacac
      481 ggattgagcg agccaacccg gggttgacgc gaacgccaac caatgtgccg tcctcatggc
      541 ccaacgatag ctgcgataca aaccccacgc caaggcctgc acgaacggct tgcttaatgc
      601 cctcaacgcc ggctaattcg aggtaccccg tcacaggtag accaagctca gcaaacgctt
      661 tgataaccaa attgcgaaca cccgagccgt cttctcgcat caccagcgat tgcgtggcga
      721 gctctgccag ctcaactgag gcgcgattgg ccagttgatg agagcgacac ataatggcaa
      781 ccacctcgtc tgtctgccat ggcaacacct ggcactggct aagcgttgct tcatttagtt
      841 caccttcgac gatggcgatg tccagttcgg acaaccgacc aacgatctca ccggtattac
      901 cggcgatcat ttgtacgtca ataccagggt gttgttgctt gaagtgcgcc acggcctctg
      961 gcagcaaata actagcgggt gtggtacttg caccaatgcg tagcgtgcca ctggccaatg
     1021 tctgatttaa ctggcgctcg tcgagagccg cttgcattgc tgcacgcaga cgctgtgcgg
     1081 gaactagcaa acgctcgcct gctggtgtta aagcaacacc gcgaccttga cgacggtaga
     1141 gtgcttcacc aaatgcctgt tgaagcgctt ggagctgccc agacacggcc ggttgtgaca
     1201 gatgcatggc gcgggcagcc tgactgatgt tgccgtgttc ggcgaccacg ctaaaggtga
     1261 tgagttgatc gggcgtcatg ggggtagacc gaagtgatgg cgttaaagag gacaacaaaa
     1321 gacgacaaag gaagacgaca aagccagacg agtaaaaaag aatatctcaa tatataggga
     1381 tattcgatat ttagtataga aaataacaga ttttcagatg atagttacat cggtagactt
     1441 cacagcttaa taaatacagc aggattggcg tgtgaccacc gtagcagcaa cctcagagac
     1501 agtttggcgc gatagaacaa gcggtgtgct gtttgtcgca ttgatggcat ttgccgtgtt
     1561 tgagctcgca aaatgggcgc ctattcgagc cttgagtatc agtccgctgg tgcttggtat
     1621 cgtctgcggc atgctttatg gcaatctaat gcgcggcacc atgccggtag agtggggcgt
     1681 aggggttaat ttcagcgccc ggcgtttgct acgcatcgca gtggcactct acggcttaaa
     1741 catcagtatt cagcaaatca ttgatgtcgg cgtgcccggt atcgtggttt cgctaggcgt
     1801 ggccgttggt gtgttggcag ccggtacttg gct
//
LOCUS       DATBNL010000389         3019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_94415, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000389 DATBNL010000000
VERSION     DATBNL010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94415"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..81)
                     /locus_tag="VIC30_06695"
     CDS             complement(<1..81)
                     /locus_tag="VIC30_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEY7804107.1"
                     /translation="MDKKVSRLRRAIPTRRKIAQLQVNRLT"
     gene            complement(103..636)
                     /gene="rplF"
                     /locus_tag="VIC30_06700"
     CDS             complement(103..636)
                     /gene="rplF"
                     /locus_tag="VIC30_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEY7804108.1"
                     /translation="MSRIAKYPVEIPKGVEATIAADSITVKGPLGTLHQNLSGDVIVN
                     ENEGKLSFVVANDSKQAKAMSGTLRALVANMVKGVSNGFEKKLNLVGVGYRAQVQGTQ
                     LKLQLGFSHDVLHDLPAGVKAECPTQTEVVIKGVDKQVVGQVAAEIRAYRPPEPYKGK
                     GVRYSDERVVMKEAKKK"
     gene            complement(649..1044)
                     /gene="rpsH"
                     /locus_tag="VIC30_06705"
     CDS             complement(649..1044)
                     /gene="rpsH"
                     /locus_tag="VIC30_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011799763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY7804109.1"
                     /translation="MSMSDPIADMLTRIRNAQQVDKPTVTMPCSKLKVAIANVLKDEG
                     YIDGYEIKGTQTKPELEIALKYYAGRPVIERIERVSRPGLRVYKGRSAIPQVMNGLGV
                     AIVSTSRGVMTDRKARATGVGGEVLCYVA"
     gene            complement(1056..1361)
                     /gene="rpsN"
                     /locus_tag="VIC30_06710"
     CDS             complement(1056..1361)
                     /gene="rpsN"
                     /locus_tag="VIC30_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004197948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEY7804110.1"
                     /translation="MAKLSLINRDIKRAKLADKFAAKRTALKAIIDDSSKSDEERYEA
                     RLKLQQLPRNASPTRQRNRCAITGRPRGVFRKFGLARNKLRDLAMKGEIPGVTKGSW"
     gene            complement(1374..1913)
                     /gene="rplE"
                     /locus_tag="VIC30_06715"
     CDS             complement(1374..1913)
                     /gene="rplE"
                     /locus_tag="VIC30_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007875323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEY7804111.1"
                     /translation="MTRLQDIYLDKIAPQLKEQFGYKSAMEVPRITKITLNMGVSEAV
                     ADKKVIEHAVADMTKIAGQKPVVTKTRKSIAGFKIREDYPIGCMVTLRGRRMYEFLDR
                     FINVALPRVRDFRGISGKAFDGRGNYNVGIKEQIIFPEVDYDKVDTLRGMNISITTTA
                     KNDDEARALLTAFSFPFRN"
     gene            complement(1925..2245)
                     /gene="rplX"
                     /locus_tag="VIC30_06720"
     CDS             complement(1925..2245)
                     /gene="rplX"
                     /locus_tag="VIC30_06720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003806917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEY7804112.1"
                     /translation="MEKIRKGDEVIVLTGRDKNRRGTILQRVDAEHVVVEGINVVKKH
                     TRPNPMQGTTGGIIEKSMPIHISNVAIFNPATGKGDRVGIKLEDGRKVRVFRSNGETV
                     GAKA"
     gene            complement(2258..2626)
                     /gene="rplN"
                     /locus_tag="VIC30_06725"
     CDS             complement(2258..2626)
                     /gene="rplN"
                     /locus_tag="VIC30_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY7804113.1"
                     /translation="MIQMQTTLDVADNTGARSVMCIKVLGGSKRRYAAIGDIIKVSVK
                     EAAPRGRVKKGEIYNAVVVRTAKGVRRKDGSLIRFGGNAAVLLNAKLEPIGTRIFGPV
                     TRELRTEKFMKIVSLAPEVL"
BASE COUNT          657 a          818 c          714 g          830 t
ORIGIN      
        1 cgtcagtcga ttaacttgta actgagcgat cttccgacga gtcggaatcg cacgacgcaa
       61 acgggaaact tttttgtcca tgatctatcc ttgtcggtgc gattacttct tcttggcttc
      121 tttcatcaca acgcgctcgt ctgaataccg aacacctttg cctttgtagg gctctggtgg
      181 acggtaggcg cgaatctcgg cggcaacttg accaaccact tgcttatcaa cgcctttaat
      241 gacgacttcg gtttgcgtcg ggcactcagc tttgacaccc gctggcaaat cgtggagcac
      301 atcgtgagaa aagccaagtt gcagctttaa ttgagtaccc tgaacctgag cgcggtaacc
      361 cacaccaacc aagttcagtt ttttctcgaa accattactt acacccttga ccatattggc
      421 caccagcgcg cgcaatgttc cggacatggc ttttgcttgc ttcgagtcgt tagcgacgac
      481 gaaagacaat tttccttcgt tttcattaac aatgacatca cccgacaaat tttggtgcaa
      541 ggttcctagg gggcctttga ccgtaatcga atcggcagcg atagttgcct caacaccttt
      601 aggaatttcg acggggtatt ttgcgatgcg tgacatttgt ctatcccctt aagcgacgta
      661 gcacaagact tcaccaccaa cacccgttgc acgggccttg cggtcagtca tgacaccacg
      721 agaggttgac acaatcgcaa cgcccaaccc gttcattact tgagggatgg cgctacggcc
      781 tttgtaaaca cgcaaacctg gccgagacac gcgttcgata cgttcaataa ctggacgccc
      841 agcgtaatac ttcaacgcaa tctcgagttc tggtttggtc tgagtgcctt tgatctcata
      901 gccgtcgatg tagccttcgt ctttaaggac gttagcaatt gccaccttca acttggagca
      961 aggcatggtt accgtgggct tgtccacctg ctgcgcatta cgaatgcgag tcagcatatc
     1021 tgcgatagga tcgctcatgc tcatgtttta ttctcctacc agctgccctt ggtcacgccg
     1081 ggaatttcac ccttcatggc caaatcacgc agtttgttac gagccaaacc gaacttgcgg
     1141 aatactccgc gtggccggcc agtgattgcg cagcggttac gctgtcgcgt tggactagca
     1201 ttgcgtggca actgctgtaa cttcagcctt gcctcataac gctcttcgtc agacttgctg
     1261 gagtcatcaa tgatggcttt cagcgcggta cgcttagcgg caaatttgtc tgccagcttt
     1321 gcgcgtttaa tgtcacgatt aatcagtgat agttttgcca cgtcatcgcc cctttagttg
     1381 cgaaacggga agctaaaggc tgttaacagc gctcttgctt cgtcgtcgtt ctttgcggtc
     1441 gtggtaatgc tgatgttcat gccacgcagc gtatccactt tgtcatagtc gacttctgga
     1501 aagataatct gttccttaat accgacgttg tagtttccgc ggccatcaaa ggctttgccc
     1561 gagatgcctc gaaagtcacg cacgcgtggc agtgccacgt taatgaatcg atcaaggaat
     1621 tcgtacatgc gacgaccgcg cagggtaacc atgcacccaa tcggataatc ttcacgaatc
     1681 ttaaatccag caatcgattt gcgcgtctta gtcacaaccg gtttttgacc agcaatcttt
     1741 gtcatgtctg cgacagcgtg ctcgatgact ttcttatcag ccacggcctc tgaaacaccc
     1801 atgttcagag tgattttggt gatgcgtggc acctccattg cactcttgta tccaaactgc
     1861 tctttcagct gtggagcgat tttgtcgaga tagatgtctt gtaaacgtgt catctgtttg
     1921 ctccttaggc cttcgcgccg acggtttcgc cgttcgagcg aaatacgcgc actttacgac
     1981 cgtcttctag cttgatccca acgcgatcgc ctttaccggt tgccgggttg aagatggcca
     2041 cattcgagat gtggatcggc atcgatttct caatgatgcc gcccgtggtg ccctgcatcg
     2101 gattggggcg ggtgtgtttc ttcacgacgt tgatgccttc tacaacaaca tgctcagcat
     2161 caactcgctg aagaatggtg ccacggcgat ttttgtcgcg gcctgtgagc acgatgacct
     2221 cgtcaccttt gcgaatcttt tccatggttc tcgcctctta aagcacttca ggcgccaggg
     2281 acacaatctt cataaacttc tcagtacgaa gttcacgggt caccgggcca aatatacggg
     2341 tgccaatggg ctcaagcttg gcattgagca acactgctgc gttgccacca aagcggatca
     2401 atgagccatc tttgcggcgc acgcccttgg ctgtgcgcac aacaacggcg ttgtagatct
     2461 cacctttctt gacacggccg cgtggcgcgg cctccttgac actaacctta atgatgtcgc
     2521 caatggcggc gtagcggcgc ttcgagcctc ccaacacctt gatgcacata acagagcgtg
     2581 cacctgtgtt gtcggccacg tcgagcgtgg tctgcatctg aatcatgatt tttcctgttc
     2641 ccaacttaat ctaagcttaa gtacgtagat cagttttggt cccgtcaggc ttttacaccc
     2701 tgggtcgaaa tctgtttaac aacatgatcg ccttgaatga aatacattca atttggtcat
     2761 ggttctctct ttttccttca ctttccctgc tacctgccgc aactggaatg aaccattgcg
     2821 ctgcggttaa ttcgggaaag ccttgcattt tataccgatt ctgcgagtcg tgcaacttct
     2881 atctctattc ttttgcattg aactaaccta cggctttttc caacccaagc gcaagagcgt
     2941 aattacctgt tgtatcagag ggcgcaagct ggttattccg tgtaaaatgt gcacatgttt
     3001 ggggccgatc cggattcga
//
LOCUS       DATBNL010000390         2984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_14924, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000390 DATBNL010000000
VERSION     DATBNL010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14924"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VIC30_06730"
     CDS             <1..212
                     /locus_tag="VIC30_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011465933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEY7804114.1"
                     /translation="AMVRFAARHEYAQTVEDVLARRWRVLFLDARQARVMAPAVADIL
                     QEETGLDPQLHEFEQMTDHYLPQVS"
     gene            complement(265..750)
                     /locus_tag="VIC30_06735"
     CDS             complement(265..750)
                     /locus_tag="VIC30_06735"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY7804115.1"
                     /translation="MLSRLPWFMGAGLMRAGLMAAGLMALCLLAMGNALAQTAQNEVS
                     ATEAYALLQDGDITLIDIRRPEEWRQTGVAQGATRINMVHPKGLQGFAQEVYNSVNGD
                     LDAPIVLICRTGSRTSRIQPILKQVGFTNVRHIPEGTLGNRSTPGWIAQGLPIDPCKH
                     C"
     gene            817..1455
                     /locus_tag="VIC30_06740"
     CDS             817..1455
                     /locus_tag="VIC30_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013209923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE/ArgO family amino acid transporter"
                     /protein_id="HEY7804116.1"
                     /translation="MTLALAQVSVFTQAFGLGLSLIVAIGAQNAFVLRQGLRGEHVIL
                     VVLFCAVVDALLIAAGVLGMATVVQNRAGLAQALAAGGAVFLTVYGIQALRRAKESQR
                     LTTSTQGQRAAWWLVLMQAAAFTLLNPHVYLDTVLLVGSIGAQQPSELRSWFIAGAAC
                     ASLSWFALLGLGARWMALWFAKPRAWQILDVVIGAVMLTLALILARHALINF"
     gene            complement(1465..2235)
                     /locus_tag="VIC30_06745"
     CDS             complement(1465..2235)
                     /locus_tag="VIC30_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018912171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7804117.1"
                     /translation="MDTSQASVTPSRIGHDWHQPALYIRVRAQILETIRSGQWPPGEA
                     IPPEKKLCEMFGVSIGTLRKAVDELTNSGVLIRRQGKGTFVASHSQDRYLFFFFHLLG
                     QDGHKEYPAVEFQKFGTAKADVYAAQALDVSVGDPLWHVSNRLSLRGEVVSLDEIYLP
                     KALFPDLSDARLKVRQTTLYQMYQDEYGQTIMRAAERVQAVLATSAQAKRLKVDVGTP
                     LLKIIRIAYSVDDRPIELRYSFVQTHSCEYRPDTYVRT"
     gene            2462..2743
                     /locus_tag="VIC30_06750"
     CDS             2462..2743
                     /locus_tag="VIC30_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008159569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEY7804118.1"
                     /translation="MIHFVVHEEGDSVGTIVVEGIQSGQTLTGWIMEQDKTIELSTRS
                     DIPIGHKIALSDLSSDDTVIKYGVDIGRVVAPIKAGEHLHVHNVKTKRW"
     gene            2781..>2984
                     /locus_tag="VIC30_06755"
     CDS             2781..>2984
                     /locus_tag="VIC30_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011872693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEY7804119.1"
                     /translation="MINQDTTFLGYRRENGRVGVRNHVIILPVDDISNAACEAVANNI
                     KGTMALPHPYGRLQFGADLDLHFR"
BASE COUNT          714 a          797 c          759 g          714 t
ORIGIN      
        1 aggcaatggt gcggtttgcc gcgcgccacg aatacgccca aacagtcgaa gatgtcttgg
       61 cccgacgctg gcgtgtgttg tttctcgatg cccgtcaggc gcgtgtcatg gccccggctg
      121 ttgctgacat cttgcaagaa gaaactgggc tagatccgca attacacgaa ttcgagcaaa
      181 tgactgatca ctacctgcct caggtgagtt agcgggttag tgagttagcg cattagtgag
      241 atagccagtt agcgagctag taagctaaca atgtttgcag gggtctattg gcagcccctg
      301 cgctatccag cctggtgtag accgattgcc caaggtaccc tcaggtatgt ggcgtacgtt
      361 ggtaaaacca acttgtttga gaatcggctg gatgcgactg gttcggctac ctgtgcgaca
      421 aatcaacaca atcggcgcat caagatcgcc gttgaccgag ttatacactt cttgagcaaa
      481 cccttgcaga ccttttggat gcaccatgtt gattcgtgtc gcaccctgcg ccacgcccgt
      541 ctggcgccac tcttctgggc gacgaatgtc aatcaacgta atatcaccgt cttgcagcag
      601 ggcgtatgcc tcagtggcgc tgacttcgtt ttgagcggtc tgtgccagcg cattacccat
      661 cgcgagcagg cacagcgcca ttaaacccgc tgccattaaa cctgccctca tcaaaccggc
      721 ccccatgaac cacggtaaac gacttaacat cacgtctcca cttcagatcg aaacactcac
      781 gcggtaatgt agcgcaagct tcagtttgac tcacttatga cactagccct tgcacaagta
      841 tcggttttca cccaagcgtt cggacttggg ctaagcctca ttgttgccat tggcgcacag
      901 aacgcgtttg ttttgcgaca aggcttgcgt ggcgagcacg tcattcttgt ggttttgttt
      961 tgtgcggtgg ttgatgcttt actgatcgct gctggcgtgt tgggcatggc cacagttgtt
     1021 cagaaccgcg ccgggttggc tcaggctttg gctgctggcg gcgccgtatt tctcacggtc
     1081 tacggcattc aggcactgcg ccgcgcgaaa gaaagccagc gtctgaccac ctcaacacaa
     1141 ggtcagcgtg cggcctggtg gcttgtctta atgcaggctg cggcttttac cctgctcaac
     1201 ccgcacgtct atctagacac cgtgctctta gtaggcagca ttggcgcgca gcaacctagc
     1261 gaattgcgca gctggttcat cgccggtgcc gcttgtgcga gcttgagctg gtttgcatta
     1321 ctggggcttg gcgcaaggtg gatggcactc tggtttgcca aaccaagagc ctggcaaata
     1381 ctggatgttg tcattggcgc agtcatgctg acgttggcgt tgatactcgc acggcacgcc
     1441 ctgatcaact tctagcttca cagactatgt tcgaacgtac gtatctggtc gatattcgca
     1501 actatgcgtc tgaacaaacg agtagcgcag ctcaattggc ctatcgtcaa cggagtaagc
     1561 gatacggata attttcaaga gcggggtgcc cacatcaacc ttcaatcgtt tggcctgggc
     1621 actcgtagct agaaccgctt gcacgcgctc ggccgcgcgc ataatggtct gaccatattc
     1681 gtcctgatac atttggtaga gagttgtttg tcgaaccttc aatctagcat ccgaaagatc
     1741 tgggaacagc gccttgggca gataaatttc atcaagagag acaacctcgc ctctaagcga
     1801 cagacgattt gagacatgcc acaacggatc acccacactt acatctaacg cttgggcagc
     1861 gtagacatca gctttggctg tgccaaactt ttgaaactca acggcgggat actctttatg
     1921 accgtcttga cctagtaaat gaaagaagaa aaacaaataa cggtcttgac tatggctggc
     1981 gacaaacgtg ccttttcctt ggcgccgaat taaaacaccg gagtttgtaa gctcatcgac
     2041 tgcctttcgc aatgtgccga tgcttacgcc aaacatctcg caaagtttct tctccggcgg
     2101 gatagcttca ccgggtggcc actgacctga ccggatggtc tccaaaatct gggcacgcac
     2161 acgaatgtat agcgctggct gatgccagtc gtgtccgatt cgagaaggtg tgactgatgc
     2221 ttgtgacgta tccatatcca accgattgtt caaaatttaa atgtgcgctc ataccaactt
     2281 gtggtgattt tagcggcaag ccaacagcct cctccaatag gcacgcagca caacaagaca
     2341 ctcgtaatca ttgatgccct gataaacata cagacgattt aaacatatat atgatatggt
     2401 tgacatagat ttattatttg ggtttaatcc cagtcagtca ttgatgaaag gagacattca
     2461 aatgattcac ttcgtcgtac acgaagaagg cgactcggtc ggcacgattg tcgtcgaagg
     2521 tatccaaagc ggtcagacgt taactggctg gatcatggaa caagacaaaa ccatcgaatt
     2581 atcaacgcgt agcgacatac caattggtca caagatcgca ctaagcgatc tcagcagcga
     2641 cgacaccgtg atcaagtacg gcgttgatat tgggcgcgtc gtcgctccca tcaaggcggg
     2701 cgagcatctg catgtacaca acgtcaagac caagcgctgg tagcccgacc gaatctgaga
     2761 caaacaagga atttatcaac atgattaacc aagacaccac cttccttgga tatcggcgcg
     2821 aaaacggtcg cgtcggtgtt cgtaaccacg tcatcatcct gcccgttgac gacatttcca
     2881 acgccgcctg cgaagcggtg gccaacaaca tcaagggcac catggccttg ccgcatccct
     2941 acgggcgact gcagttcggc gcggatctag atttgcactt ccgt
//
LOCUS       DATBNL010000391         3739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124355, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000391 DATBNL010000000
VERSION     DATBNL010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124355"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VIC30_06760"
     CDS             <1..389
                     /locus_tag="VIC30_06760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3400 domain-containing protein"
                     /protein_id="HEY7804120.1"
                     /translation="CHTPMKLQDPMKTVRSLVGQDTIKTDRCCGESGTLAVTRPDIST
                     QVRFRKEIELDKNMAELKGDGFDGEVKMLTSCPSCLQGLSRYQADTGAQADYIVVEMA
                     RHVLGQSWLEDYVKVANQGGIERVLV"
     gene            complement(402..1181)
                     /locus_tag="VIC30_06765"
     CDS             complement(402..1181)
                     /locus_tag="VIC30_06765"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006227209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEY7804121.1"
                     /translation="MSLTLDLNCDMGESFGAWTMGHDAEIMPYISSANIACGYHAGDP
                     GVMRETVACACEHGVAIGAHPGLPDLQGFGRRAMAITEQEAYDMVVAQIGTLAGVAAS
                     QGTRLNHVKAHGMLYNMSVKDRALARGIARAVHDVDKSLVFFGLAGSHMLEEAQSLGL
                     AVAGEVFGDRTYQPDGSLTPRSKPGAMITDVKLSIEQVLRMVKDSTVIAQDGSAVTVK
                     ADTLCLHGDQPDAVDFAIAIRAALKEHDIAVKATTSSVTAF"
     gene            complement(1217..2233)
                     /locus_tag="VIC30_06770"
     CDS             complement(1217..2233)
                     /locus_tag="VIC30_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEY7804122.1"
                     /translation="MSMLVKRPGLLSSFQDGGRWGYQHLGVSVTGAMDVQSHHMANLI
                     AGNTEDCATLEITLLGPVLTFTQPCCICLTGAQMNARINDRLAPRYRPLIARAGDTLT
                     FETATEGTRAYLAVYGGFDLPVIMNSQSTYLRAGFGGWQGRALVKGDDIGLRAPLNGD
                     PDALTALSERIWNQVIYLPSTLGQHTGRKSLVRLIRSDQWPEFTVQSQRALVSSTWRV
                     STDSERMGYRLEGPEISLTKPREMISEATTFGSIQVPRGGQPIVLMADRQTSGGYPKI
                     GTVASVDLPILAQKKPGDEVRFTLVNVEHAQELDRQKADALEELAVSLANIRQWLSDA
                     RANS"
     gene            complement(2230..2952)
                     /gene="pxpB"
                     /locus_tag="VIC30_06775"
     CDS             complement(2230..2952)
                     /gene="pxpB"
                     /locus_tag="VIC30_06775"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEY7804123.1"
                     /translation="MSAELIKRIRAQGDRCLLIDLGDQIDEQVGLRCLRLAECLRQAA
                     VPGVLDIVASFTAVAIYYQPGRELGDEPIARLTELVNDIAQQIAQGTVELTSRRIEIP
                     VCYGGEHGPDLDDVAHRMGISPDEVVQAHHASVSRVYMIGFSPGHPYIGIHDERFNLP
                     RREVPRTALPAGSLGIANRQSTIYPNVLPGGWHIIGATPLKLFNATAAEPTLLAPGDE
                     IAFVPIDASEFDTIKAQQEASA"
     gene            complement(2970..3401)
                     /locus_tag="VIC30_06780"
     CDS             complement(2970..3401)
                     /locus_tag="VIC30_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY7804124.1"
                     /translation="MMAETTMPPFHLAFPVRDLSEARQFYGDLLGCAEGRSSEDWIDF
                     NFYGHQIVAHLAPQDCGAMSTSNVDNHQVPVRHFGAVLSMSAWETLADKLKQAGTAFI
                     IEPYVRFKGEVGEQATMFFQDPSGNAIEIKSFKNMEALFAK"
     gene            complement(3478..>3739)
                     /locus_tag="VIC30_06785"
     CDS             complement(3478..>3739)
                     /locus_tag="VIC30_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005018218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804125.1"
                     /translation="QGEQGARFSVKDTGIGIAAEHIPRLSERFYRVDRSRSRAAGGTG
                     LGLAITKHIAMRHEADFQIESRLKQGSTFSLVFPENRLSHAT"
BASE COUNT          848 a         1018 c         1047 g          826 t
ORIGIN      
        1 cctgtcacac gccaatgaaa ctgcaagacc ccatgaaaac agtccgatca ctcgtcggtc
       61 aagacaccat caagaccgat cgttgttgtg gtgagtcagg tacgttggca gtcacacgcc
      121 ccgatatctc aacgcaagtg cggttccgta aagagatcga gcttgataag aacatggccg
      181 agctcaaggg cgatggtttt gacggcgagg tcaagatgtt gacgtcctgt ccatcgtgtc
      241 tgcaaggctt gtcacgctat caggcagaca cgggcgcgca agccgactac atcgtggtcg
      301 agatggcgcg ccacgtactt ggccaaagct ggttggaaga ctatgtcaaa gtcgccaacc
      361 agggtgggat tgagcgtgtg ttggtctagc gctaatcgcg cttagaaagc agtcactgaa
      421 cttgttgttg ccttgaccgc aatgtcatgc tctttgagtg ctgcgcgaat ggcaatcgca
      481 aagtccacgg catcgggttg atcgccatgc agacacaggg tgtctgcttt gacagtgact
      541 gcactaccgt cttgggcaat gacggtgctg tctttgacca tacgcagaac ctgctcaatc
      601 gacagtttga cgtctgtgat catggcgcca ggtttgctgc gtggtgtcag gctgccatcg
      661 ggctggtagg tgcgatcacc aaacacttcc cctgcaacag ctaagccaag cgactgcgcc
      721 tcttcgagca tgtgactacc tgccaaccca aaaaatacca gcgacttgtc gacatcgtgt
      781 accgcacgcg caataccgcg agctagcgcc cggtctttaa ccgacatgtt gtagagcatg
      841 ccatgggctt tgacatgatt caggcgggtg ccttgcgagg ccgccacgcc agccaacgtg
      901 ccgatttggg ccaccaccat gtcataggcc tcttgttcag taatcgccat ggcgcgccgt
      961 ccaaaccctt gcaggtctgg caaacctggg tgcgcaccaa tggccacacc gtgctcgcag
     1021 gcacaagcca ccgtttcacg catcacgcca gggtccccag cgtgatagcc gcacgcgata
     1081 ttggccgatg agatgtaggg catgatctcg gcatcatggc ccatggtcca ggcgccaaag
     1141 ctctcgccca tgtcgcagtt cagatctagt gtcagactca tcatatcccc catcactttt
     1201 aattaagcat tcttaattac gaatttgcgc gagcatcgct taaccactgc cggatattgg
     1261 ccagtgagac cgccagctct tcaagggcat cggctttttg acggtcaagc tcttgtgcgt
     1321 gttcaacatt gactaatgta aagcgtactt catcgcccgg ctttttttga gccaggatcg
     1381 gaagatcgac actggctacc gtgccaatct ttgggtaacc ccccgatgtt tggcggtctg
     1441 ccatgagcac aatgggttgc ccaccgcgtg gtacttgaat ggagccgaat gtggtagctt
     1501 cagagatcat ttcacgtggt ttggtcaggc tgatttcagg gccttcgagt cgatagccca
     1561 tgcgctcgga gtcagttgag acgcgccacg tgcttgacac gagtgcgcgt tggctttgca
     1621 cagtgaattc gggccactga tcactgcgaa ttaggcgcac caaggacttg cgccccgtgt
     1681 gctgcccaag cgtgctcggt aggtaaatga cctgattcca gatgcgctca ctcagggcgg
     1741 taagcgcatc cgggtcaccg tttaaggggg cgcgcaagcc gatgtcatca cctttgacga
     1801 gcgcgcggcc ttgccagcca ccaaacccag cgcgcagata ggtactctgg ctgttcatga
     1861 tcacgggtaa gtcgaacccg ccgtatacgg ctaggtaagc acgggtgcct tcagtggctg
     1921 tttcaaacgt caatgtgtca ccggcgcgcg cgattagcgg acgataccga ggtgccaagc
     1981 ggtcattgat acgagcattc atttgcgcgc cggtcaggca aatgcaacac ggttgcgtga
     2041 aagtcagcac aggccctaaa agggtgattt ccagtgtggc gcagtcctcg gtattgccgg
     2101 caatgagatt ggccatgtga tgtgactgca catccatggc gccagtgact gaaacaccaa
     2161 gatgctgata accccatcgt ccaccgtctt ggaaggaaga gagcaggccg gggcgcttga
     2221 cgagcatgct catgcgcttg cttcctgttg cgctttgatt gtgtcaaact cgctggcatc
     2281 gatcggtaca aacgcaattt catcgccagg cgcaagcaac gtgggctcgg cggctgtggc
     2341 gttaaagagc tttagcggtg tggcaccaat gatgtgccag ccaccaggca agacgttggg
     2401 atagatggtg ctttgtcgat tggcaatgcc aagggatcct gcgggtaacg ccgtacgtgg
     2461 cacttcccgg cgcggcaggt taaagcgctc atcatgaatg ccaatatagg ggtgaccagg
     2521 tgaaaagccg atcatataaa cccggctaac acttgcgtgg tgggcttgca cgacttcgtc
     2581 tggcgagata cccatgcggt gagccacgtc gtcaagatct ggcccatgct cgccgccata
     2641 gcaaaccggg atctcgatac gtcgagaggt gagttcaacg gtgccctgag cgatctgttg
     2701 ggcgatgtca ttgaccagtt cggtcagacg cgcgatgggt tcgtctccga gctcgcgacc
     2761 cggttggtag taaatggcca cggccgtaaa cgacgccaca atatccaaca cgcctggtac
     2821 tgcggcttgt cgcaagcact cggcaagtct caggcaacgc aaacccacct gctcatcaat
     2881 ctggtcaccc aggtcaatga gcaggcaacg atcaccctgc gcacgaatgc gtttgataag
     2941 ttcggcagac atgtcatgaa gccttgggct tacttggcga acaacgcctc catgttctta
     3001 aacgacttga tctcaatggc attgcctgaa gggtcttgaa agaacatggt ggcttgctca
     3061 ccgacttcgc ctttaaagcg aacatagggc tcgataataa acgcggtgcc agcttgcttt
     3121 agtttgtcgg ccagtgtctc ccaggcagac atcgagagca cggcaccgaa atggcgcact
     3181 ggaacttggt ggttgtcgac attactcgta gacatggcgc cacagtcttg cggggccaag
     3241 tgagccacga tttgatggcc gtagaaattg aaatcgatcc agtcctcaga gctgcggccc
     3301 tcggcgcaac cgagtaaatc accataaaac tgtcgggcct cagacaagtc tcgtacgggg
     3361 aatgctaagt gaaatggtgg catggtggtc tcagccatga tgcaagtgct ccaaaataaa
     3421 cgagtgcaat cgccaaaggc gactgacgtg gtaactaatt cgctaaataa gaggatatca
     3481 ggttgcgtga cttaagcggt tctcaggaaa gacaaggcta aaggtactgc cttgtttaag
     3541 tcgactttca atctgaaagt ccgcttcatg gcgcatggca atgtgtttgg tgatggccaa
     3601 ccccagaccc gtaccaccgg cagccctcga acggctgcgg tcaacccggt aaaaacgttc
     3661 gctaagtcgc ggtatgtgtt cagcagcaat cccgatgccg gtgtctttga cgctaaatcg
     3721 cgcgccttgt tcaccttga
//
LOCUS       DATBNL010000392         2060 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74627, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000392 DATBNL010000000
VERSION     DATBNL010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74627"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VIC30_06790"
     CDS             <1..364
                     /locus_tag="VIC30_06790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804126.1"
                     /translation="LVARYLEAHGIATVILGCAKDIVEHCGVPRFVFSDFPLGNAAGK
                     PHDEQSQHDTLALALEVLAFAPAARTTVQSPQRWSADPDWKLDYCNPDRTSADELARL
                     RQQADEAKAEIARKKTGL"
     gene            complement(380..1456)
                     /locus_tag="VIC30_06795"
     CDS             complement(380..1456)
                     /locus_tag="VIC30_06795"
                     /inference="COORDINATES: protein motif:HMM:NF007504.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HEY7804127.1"
                     /translation="MATTHHFNAQSLQTAIEAVVRGFGSEPTEVDLVSRNLIQANLTG
                     HDSHGIGMLPRYARSLAEPGGLKANAHIAVRLDHGHMIGLDGQAGFGQVVGHEAMQLG
                     IERAQTHGSCILALGNAHHLCRIGAWAEMAADAGLISIHLVNVLAKPVVAPWDGADGR
                     FGTNPFCVGIPVSGRDPIIVDFATSIIAQGKTRVAHNKGVPLKPGQMIDDKGQPTTDP
                     VYGVKPPYGALKTFGEHKGFGLALVCELLGGALAGGMTLHEHTSEQRIFNGMLSILID
                     PNKLSQGNSFVTESLAFIDWVKESPALEGTDGVHLAGEPERQTKAQRLQNGIPVDENT
                     WLEILQTCDALGVDRQAVDTLARA"
     gene            complement(1473..2060)
                     /locus_tag="VIC30_06800"
                     /pseudo
     CDS             complement(1473..2060)
                     /locus_tag="VIC30_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604033.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
BASE COUNT          449 a          560 c          564 g          487 t
ORIGIN      
        1 cctcgtggcg cgttaccttg aagcccatgg cattgccacg gtgatactcg gttgtgccaa
       61 agacatcgtg gagcattgtg gggtgccgcg gttcgtgttt agcgacttcc cgcttggcaa
      121 tgccgccggt aaaccgcatg acgagcagtc acaacatgac acgctggcat tggcacttga
      181 agtgttagcg tttgcgccag cggcacgcac gaccgtgcaa tcaccgcaac gctggtcagc
      241 cgaccccgat tggaagcttg attattgcaa ccccgatcgc acctcggccg atgaactggc
      301 gcgacttcgg cagcaagccg atgaggccaa agcggaaatc gcgcgtaaaa aaaccggact
      361 gtaggcgatt ggtgtgtatt taagcccgag ctaacgtatc cactgcctgg cgatcaacac
      421 cgagcgcgtc gcaggtttgc aggatttcta gccacgtgtt ctcgtcaact ggaatgccgt
      481 tttgtaggcg ttgtgctttg gtttgtcttt ccggttcacc tgccagatga accccatcgg
      541 tgccttctag cgcaggcgac tctttgaccc agtcgataaa tgccagtgac tctgtgacaa
      601 acgagttgcc ttgggagagt ttgttcgggt caatcaagat gctgagcata ccgttaaaga
      661 tgcgttgctc ggaggtgtgt tcgtgcagtg tcatgccacc agccaaggcg ccaccaagta
      721 actcgcatac cagtgctagc ccaaaccctt tgtgttcacc aaaggttttt aacgcgccat
      781 aagggggctt cacaccatag acggggtcag tggtgggttg ccccttgtcg tcaatcattt
      841 gtccgggctt aagtggcacg cctttgttgt gtgcaacgcg tgtcttgcct tgcgcgatga
      901 tgctcgtggc gaagtctaca atgatggggt cgcggccact aacgggtata cctacacaaa
      961 atgggttggt gccaaagcgt ccgtctgcgc catcccaggg ggcaaccaca ggtttggcca
     1021 gcacgttcac caagtgaata gagatcagac ccgcatcagc ggccatttcg gcccatgcgc
     1081 cgatgcgaca taaatgatgt gcgttaccaa gagccagaat acaactgccg tgtgtttgcg
     1141 cgcgttcgat gcccagttgc atggcctcgt gaccaacaac ctgaccaaat ccggcctgac
     1201 cgtctagtcc gatcatgtga ccatgatcca ggcgcaccgc aatgtgtgcg ttggctttta
     1261 agccaccagg ctcggccaga gatcttgcgt agcggggcaa cataccaatg ccatgagagt
     1321 catggccggt gaggttggct tgaattaagt tgcggctaac caaatcaact tcagttggtt
     1381 cgctgccaaa ccctcgaacc accgcctcaa tggcagtctg aagtgactgc gcattgaaat
     1441 gatgcgttgt tgccatgttg cccctttatc aatcactgca tataccaccc gtggctgacg
     1501 atgaacgatt gacccgtcat ggccgccgtc gggaatcctg ccaagaaggt tacaacagaa
     1561 gcgacgtcat cggtggtggt aaaaatgcca tcaaccgttt gacccagcat gactttcttg
     1621 atgacttcgt cttcactgat accgaggttt tgtgcctgct cggggatttg cttgtcgacc
     1681 aacggggtac gcacaaaacc ggggcaaacg acataggcgc gcacgttctt ctcggcacct
     1741 tccttggcga ccacgcgggc cagacccagc aaaccatgct tggcggtcac gtaagctgat
     1801 ttcagcttgg atgcttcgtg agagtgtact gaacccatat aaatgatcga gccgccacgg
     1861 ccgctggcat acatgtgttt tatagctgcc tgggttgtca gaaatgcacc atcgaggtgg
     1921 atggacagca tttttttcca gtccgcaaac ggaaattctt cgattgggtg cacgatctgg
     1981 atgccagcgt ttgataccag cacgtcaatg ctgccgagtt ctttgacggc ttgttcgata
     2041 ccggcgttga cctgttctta
//
LOCUS       DATBNL010000393         2881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_134363, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000393 DATBNL010000000
VERSION     DATBNL010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134363"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VIC30_06805"
     CDS             complement(<1..592)
                     /locus_tag="VIC30_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY7804128.1"
                     /translation="MSAADISRMNPAQQQAVRYLDGPSLVLAGAGSGKTRVITSKIAY
                     LVGQCGYEPRSVFAVTFTNKAATEMRERLTKVLGRERVEELTISTFHALGVRLLRQES
                     RAAGLKPGFSIMDAQDGFGLIQSLVATTDKARLKAIAQQISLWKNALIDPDAAAYLAQ
                     NAQQTDAARVYHSYQATLSAYQAVDFDDLILRPCQLL"
     gene            complement(599..2701)
                     /locus_tag="VIC30_06810"
     CDS             complement(599..2701)
                     /locus_tag="VIC30_06810"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEY7804129.1"
                     /translation="MASISPTSSSVSSATRYCRVALDVPLNGPFDYLSMEAVVPGDRV
                     IVPFGRRRLIGVVTQCDVTPSFAVENIREIEKVLRDLDPLPAKWLELAAFAASYYQRP
                     MGEVVLPALPVPLRRVSSYEGKRVGQQGPVERLKKRLAKSGAQATPEATVEPIELNEE
                     QLEAVEQITRAQGFQAYMLHGITGSGKTQVYLAAAQAVLARGARVLFLVPEINLTPQF
                     AQALLARLGGVVGIDEVAVLHSRLSDGERLGAWLRAHDGRARIVLGTRLAIFAPMPDI
                     DLIVVDEEHDTSYKQQEGLRYSARDLAIWRARQEQAVVVLGSATPSLETWHKVERGDY
                     KRLGLSKRATAGQLPEVKLVDTRRLQMDQGLSPHLLEAMKVTLSEGRQVLVYLNRRGY
                     APVLHCDSCGWVSQCEHCTAYSVVHRAQGRRMRLHCHHCGAQSAAPPACPVCGDPDLQ
                     PMGRGTQRLEEHIAELFPDARLTRIDADSTRRKGSAEGLFEQVHAGEVDILVGTQMVS
                     KGHDFANLGLVGVINADAMLFSQDFRAPERLFAQLMQVAGRAGRDGKAGLVMVQTGYP
                     EQPLYQALKRHDFEGFAHSLLTERQAAMLPPYSFQALLTAEATELTDAIGFLEAARAT
                     ALAWLQAHELHEVVTLYDAVPLRVVRVAKVCRAQLLLEASSRAALHRLLKGWLPGLGP
                     RHASGGIRWQLEVDPLEI"
BASE COUNT          672 a          873 c          731 g          605 t
ORIGIN      
        1 ccaacagttg gcagggcctt aagatcagat catcaaagtc cacggcctga taagcagaca
       61 aggtagcctg atagctgtga tagacccgcg cagcgtccgt ttgttgggcg ttttgtgcaa
      121 ggtaagcagc cgcatccgga tcaatgagtg cgtttttcca gagggagatt tgttgggcaa
      181 tggcctttaa gcgtgccttg tcagtggtgg cgaccaatga ctgaatcaaa ccgaagccgt
      241 cttgcgcatc cataatcgag aatccgggct ttaatcccgc agcgcgcgac tcttgtcgca
      301 acaggcgcac acccaatgca tgaaaggtac tgatggtgag ctcctcgaca cgctccctac
      361 caagcacttt ggtcaaacgc tcgcgcatct cggtggccgc tttgttggtg aaggtcaccg
      421 caaaaacgct acgcggttca taaccgcatt gacccaccaa gtaagcaatc ttgctggtga
      481 tcacccgcgt tttaccagaa ccggcacccg ccaacaccaa actcgggcca tcaaggtaac
      541 gcacagcttg ttgctgtgct gggttcatac gagaaatatc agctgcactc atcagacgct
      601 agatttccag tgggtcaact tcaagttgcc aacgaatacc accgctggca tgccgtggcc
      661 cgaggcctgg caaccagccc tttagtaaac gatgcaatgc tgcacgcgaa ctcgcttcaa
      721 gtaagagctg ggcgcggcag actttcgcta cccgcacaac cctaagcggc actgcgtcat
      781 acagggtaac aacctcgtgc aattcatgtg cctgcagcca tgccaatgca gtagctcgcg
      841 ctgcctctaa aaacccaatg gcatcagtta attccgtggc ttcagcggtc aacagtgcct
      901 ggaaactgta aggcggcaac atggcagctt gccgctcagt caaaaggctg tgcgcaaacc
      961 cctcgaaatc gtggcgcttt aaagcctgat acaagggctg ctccggatag cccgtttgca
     1021 ccatcaccaa gcctgcctta ccgtctcgcc cggcgcgacc ggcgacttgc atcagctgtg
     1081 cgaacaaccg ctctggtgcc cggaaatctt gtgagaacaa catcgcatcg gcattaatca
     1141 cgccaaccaa cccaagattc gcaaaatcat ggcccttgga taccatttgc gtgccaacta
     1201 agatatccac ctcaccggca tgcacctgct caaacaagcc ctcggcactg cctttgcgtc
     1261 gcgtgctgtc ggcatcgata cgcgtgagcc gcgcatccgg aaacagttca gcaatgtgtt
     1321 cttccaatcg ttgcgtgccg cggcccatgg gctgcaaatc cgggtcccca cacacggggc
     1381 atgctggtgg tgccgcactt tgcgcaccgc agtgatggca gtgcagccgc atgcgtcggc
     1441 cctgtgcgcg atgcaccaca ctgtaagcgg tgcaatgctc gcattggcta acccagccac
     1501 aactgtcaca gtgcaacacc ggcgcatatc cacggcgatt caaataaacc agcacttgac
     1561 gaccctcaga caaggtcact ttcatggcct cgagcaagtg cggcgacaag ccctgatcca
     1621 tctgcaagcg acgggtatcc acgagcttga cctctggcaa ctgtccggct gttgcgcgct
     1681 tgcttagacc caagcgcttg taatcaccgc gctcgacctt atgccaggtt tctagcgatg
     1741 gcgtggccga tccgagcacc accacggctt gctcttgtct ggcacgccag atcgccaaat
     1801 cgcgggctga atagcgcaaa ccctcttgct gcttgtacga cgtgtcgtgt tcttcatcga
     1861 ccacgatcaa atcaatgtcc ggcatgggcg caaatatcgc caagcgcgta cccaacacga
     1921 tgcgtgcccg cccatcatgg gctctcaacc atgcgcctag tctctctccg tcagacagtc
     1981 gactgtgcag cacggccact tcatctatac cgaccacacc accgagcctc gctagaagcg
     2041 cctgggcaaa ctgaggcgtc aaattgatct cgggcaccag aaacaacacc cgagcgccgc
     2101 gtgcgagcac cgcctgcgcg gctgctaagt agacctgggt tttaccactg ccggtgatgc
     2161 catgcagcat ataggcttga aacccttgcg cccgcgtgat ctgctcgacg gcctcgagct
     2221 gctcttcatt gagctcgatt ggctcaacgg ttgcctctgg ggttgcctgg gcgcccgatt
     2281 tagcgagtcg tttttttagg cgctcgacag gcccttgctg acccactcgc ttaccctcgt
     2341 aactgctaac acgacgtaac ggcacgggta gcgcaggcaa gaccacctcg cccatgggtc
     2401 tttgatagta cgaagccgca aacgctgcga gctctaacca ctttgctggc agcggatcga
     2461 gatcgcgcag aactttctca atctcgcgga tgttttctac ggcaaagctc ggggtgacat
     2521 cgcattgcgt cacaacacca atgagccggc gcctgccaaa aggcacgatt acccgatcac
     2581 ctgggacaac cgcctccatg gacagataat caaaaggccc attcaacggc acatcaagtg
     2641 ccacacggca atagcgtgtg gcacttgata ccgaacttga tgtcgggctg attgatgcca
     2701 tgagttaaag tgatttctcg attatgaacg taacgcgctg agacagggag agtatttgag
     2761 agcaagctta ttagcctgcc cacagcctgt ggataacttt ggggaaaaca tttctggact
     2821 gtaaattttt acgactgtca agttgactaa aagtcgcatc tcactctgaa acaaattaaa
     2881 t
//
LOCUS       DATBNL010000394         4131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_114113, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000394 DATBNL010000000
VERSION     DATBNL010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4131
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114113"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2366)
                     /locus_tag="VIC30_06815"
     CDS             complement(<1..2366)
                     /locus_tag="VIC30_06815"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY7804130.1"
                     /translation="MHGRPLGWPTALEVLQAFEIPSETILVVFLPVLLFETALNTNVR
                     GLINDLPPILLLAVVAVFICTVFVGWGVSFVSSYSLAACLLLGAIVATTDPAAVVSIF
                     KEVGAPKRLTTIVEGESLLNDAAAIALYAVLVGIVSNTAVSSWGSGDLLLSFLDLMIG
                     GAISGYLIGRLTCAVLPLLRGWPTAEISLTVACAYIAYIIPEQYFGWSGVVSTVVAGL
                     VVSSVGRTRMTQTTAYALAQSWRQFGFWASSLIFLFAAMMIPRLLAHATWHDLLVVAV
                     AMVAALAARAATVYGLLPVLTTMVGTHVENRYKAVICWGGLRGALSLALALAVTEHAL
                     LADDVSNFVATGATGFVLATLIINGLTLRPLINFLELNKLSPLERALRNQAVVITVSD
                     LQAETKRIAVDEQISRQARAKIDDVFDASVASVTDTQIGQFDEDERIRLGLSMIASRQ
                     SELVLVGLGEQGLDRRTTERLLSVSERMEDDVKADGIAGFKKSIGRSLRYPRSFELVL
                     KLHRSLGLQGLLGKELGQRFVELVAWRWLTRRLIAFANTQIRPMLGDGATDTIQDALR
                     DRLARVEENMQALRLQYPQFAEWLEQNYLGRLARTLERSRYRKMLEESVITGEVYDDL
                     LEQLEDRWAFLDAAPPIDVELAPEALAHKVPLLADLPDETLRKLTRKLKTRLALPRQL
                     IQGPNKPNPSLYFVASGAVSMRLPDATHIELGSGEFFGELYLLNQDAAEFEVRSLGYT
                     KLLELTARDFKSLLAQDATLRSTIELVAQQRLRALEVGRSAMAREQTD"
     gene            complement(2576..3466)
                     /gene="rpoH"
                     /locus_tag="VIC30_06820"
     CDS             complement(2576..3466)
                     /gene="rpoH"
                     /locus_tag="VIC30_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEY7804131.1"
                     /translation="MQTAISRDVAFSPQALSMAVANPGSLGSIEAYITAVNQMPMLSA
                     DQEREYGVSLRDNNDLDAARNLILSHLRLVVSIARQYLGYGLAHADLIQEGNVGLMKA
                     VKRFDPDRGVRLVSFAVHWIKAEIHEFIVRNWRLVKVATTKAQRKLFFNLRRMRPDGT
                     TLDSATVDDIARDLDVKPEEVREMEVRMSGRELSLQAPSDDESQFSPSDYLSDGGQYE
                     PSQVMARQDQDTLQSSGLVNALETLDARSRRVVTARWLNDEGSTTLHELAAELGVSAE
                     RVRQIEVAALKKMRGALEPA"
     gene            3687..>4131
                     /locus_tag="VIC30_06825"
     CDS             3687..>4131
                     /locus_tag="VIC30_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804132.1"
                     /translation="MRLSRLYAPGEVQLVQVQFAQAQTQVWQTRTPAALFDTLASWLA
                     DLIKTRQVQLHAWSLTPEALLMLVTPSDAQALSAVVQAIGRRLAATLKSGSVFAGRYK
                     SALVEPEQTLTAQVWIELAALRAGYVANPVDWVWSSAGHHAGAATV"
BASE COUNT          990 a         1137 c         1114 g          890 t
ORIGIN      
        1 tggtcggtct gctccctagc cattgcagag cgcccaacct caagcgcccg tagtcgttgc
       61 tgggcaacca actcgatggt actgcgcagt gttgcatctt gcgccaagag cgatttgaag
      121 tcacgtgcgg tcagttctag cagcttggtg taaccaagcg aacgcacctc aaactccgca
      181 gcatcttgat tcagcaggta cagctcccca aagaactcgc ctgaacccag ttcaatgtgc
      241 gtggcatctg gcagacgcat cgacacggca cccgaggcca caaaataaag cgagggattc
      301 ggtttgttgg gaccctgaat cagctggcgg ggcaacgcca gtcgggtttt taatttgcgc
      361 gtgagtttac gtagggtctc gtctggtaaa tcggcaagca agggcacttt gtgggccagc
      421 gcttctggcg caagctccac atcgatcggt ggcgctgcat ctaaaaatgc ccagcggtct
      481 tcaagttgtt cgagcagatc gtcatagacc tcaccggtta tgactgattc ctcgagcatt
      541 ttccggtagc gagagcgctc gagcgtgcgt gccagtctgc ctaggtagtt ttgttcaagc
      601 cactcggcga actgcgggta ttgcaagcgc agggcctgca tgttctcttc aacgcgggcc
      661 aatcgatccc taagcgcatc ttggatggtg tcggttgccc catcgcctaa catgggccgg
      721 atttgcgtgt tggcaaaggc aatgagtcgc cgagtcaacc atcgccaggc cacgagctca
      781 acaaatcgct gcccgagctc cttccccaga aggccttgca gtccaagtga gcgatgcagt
      841 tttagaacta gctcgaagga acgggggtat ctgagtgagc gcccaatcga ctttttaaag
      901 cccgcaatgc cgtcggcttt gacgtcatct tccatgcgct cagacacaga cagcaagcgt
      961 tcagtggtgc ggcgatcgag gccttgctca ccgagcccta cgagcacgag ttcgctttgg
     1021 cgactggcga tcatggacag cccgagtcgg atgcgttcat cttcatcaaa ctgcccgatt
     1081 tgcgtatccg tgacgctggc tacgctggca tcaaaaacgt catcaatttt ggctctggct
     1141 tgacggctga tttgctcatc gacggcgatg cgtttggttt cggcttgcag gtcgctaact
     1201 gtaattacca cggcctgatt gcgaagcgct cgctccaacg gcgagagctt gttgagctct
     1261 agaaagttaa tgagtggtcg cagcgttaaa ccgttgataa tcagcgttgc caaaacaaac
     1321 ccggttgcac ccgtggccac aaaattactg acgtcatcgg ccagtaaggc atgttcagta
     1381 actgctagtg cgagcgccaa agacaaggcc cccctcagac caccccagca aatcacggct
     1441 ttgtagcgat tttcgacgtg cgtgcccacc atggtggtca gtacgggcag caacccatac
     1501 accgtggcag cacgagcagc gagtgccgcg accatggcaa ccgccacaac cagcaaatca
     1561 tgccaggtgg catgcgctag caggcgtgga atcatcatgg cggcaaataa aaaaatcagc
     1621 gagcttgccc agaaaccaaa ctgacgccag gattgggcca acgcataagc cgtggtttgg
     1681 gtcattcgtg tgcgacccac tgacgacacc accaaacccg ctacaactgt agacaccacg
     1741 cccgaccagc cgaaatactg ttccggaatg atgtaggcga tgtaggcgca tgccacggtc
     1801 agagaaatct ctgctgttgg ccatcctcgt aataatggta agacggcaca tgtcagacgc
     1861 ccaatgagat agccgctaat ggcaccacca atcatcaagt ccagaaagct caataaaaga
     1921 tcgcctgagc cccatgagct taccgctgtg ttcgacacaa tgccaacgag tacggcatat
     1981 aacgcgatgg ctgccgcatc attgagcagg ctttcacctt cgacaatggt tgtcagccgt
     2041 ttgggcgccc ccacctcttt gaagatgctc accacggcgg ctgggtctgt cgtagcgacg
     2101 atggcaccga gcaacagaca ggctgccaaa ctgtagcttg agacgaaaga cacaccccac
     2161 ccgacaaaca cggtgcaaat aaataccgcc accacggcaa gcagcaaaat tggcggcaaa
     2221 tcgttgatca atccgcgcac gttggtgttt agcgcagttt caaacaacaa gaccggcaaa
     2281 aagaccacca agatggtttc agagggaatt tcaaaggcct gcaaaacttc aagcgcggtc
     2341 ggccagccaa gcgggcgccc atgcatggac gtgaatcaca taacctagta aagcgcccac
     2401 aatcgacaac aataggctcg acgggatgcg tagtgcactt gccaaaggtg acaagaagca
     2461 aaccagcacc agaagtccag caagaccaaa aacgagcatc tcagttgtca tgctcgctat
     2521 ggtagcgggt tatttggaag cgcgttagtg tcagatggcc tgtcgactaa cggtgtcagg
     2581 caggttcgag tgcaccgcgc atttttttaa gtgctgccac ttcgatttga cgcacccgtt
     2641 cagctgatac accgagttca gccgcgagtt cgtgcaacgt ggttgaaccc tcgtcattta
     2701 accaacgggc agtgacgacc cgacgtgatc gggcgtcgag cgtctcgagc gcgttgacca
     2761 gtccacttga ttgcagtgtg tcctggtctt ggcgagccat cacttgactc ggttcgtact
     2821 ggccaccgtc agaaagatag tcgctggggc taaattgact ttcatcgtcc gagggggctt
     2881 gcaaagatag ttcacgcccg gacatccgaa cctccatctc gcgaacttcc tcaggtttga
     2941 catcaagatc acgggcgata tcgtcaacgg ttgctgagtc cagagtggtg ccatcagggc
     3001 gcatgcggcg caggttaaaa aacagctttc gctgtgcctt ggtcgtggcc actttgacca
     3061 agcgccaatt gcgcacgatg aactcgtgaa tctcggcttt gatccaatga accgcgaacg
     3121 aaaccaaccg cacaccacgg tctggatcga atcgtttaac ggccttcatg agaccgacgt
     3181 tgccttcctg aatcaggtcg gcgtgtgcca agccgtaacc taggtactga cgtgcgatgg
     3241 aaactaccaa gcgaaggtgc gacaggatca ggttgcgagc tgcatccaaa tcgttgttat
     3301 cgcgcaggct aacgccatac tcgcgctctt gatcagcgct aagcatgggc atttgattaa
     3361 cggcggtgat gtaggcttcg attgagccga gcgagccggg attcgccacg gccatcgaca
     3421 aggcttgcgg tgaaaaggca acatctcgag aaatcgcagt ctgcataaat aatgaactcc
     3481 cgtccaaaca ggttaaaaca ctaaaaaacg ctaaaaaatg ctaaaaaatg ctacgttttt
     3541 gatactgcgt tcttgtatct aattatgtta gcactctctt aattggagtg ctaatgagac
     3601 tggttcgacg gccgaaagtt ccgtgcgcct gcgcacttgt gtaatctaga aacaccacgt
     3661 cgaccgtaag ccttgcagga tatctgatgc gtttgtctcg tttgtacgcc ccgggggaag
     3721 ttcagctcgt ccaggtacag tttgctcaag cccaaactca ggtttggcag actcgtacac
     3781 cggctgctct attcgatacg ttggccagct ggcttgccga cctcattaaa acacgccagg
     3841 tgcagttgca cgcttggtcg ttgacccctg aggccttgct aatgttagtg acgccgtctg
     3901 atgcccaagc tttatctgct gtggtgcaag caatcgggcg ccgactggct gcaacgttga
     3961 aatccggtag cgtatttgcc gggcgatata aaagcgcgct tgtggagccc gaacaaacct
     4021 tgacggcaca agtttggatc gagcttgccg ctttgcgggc gggctacgtt gctaacccgg
     4081 tagattgggt ctggtcatct gctgggcacc atgcgggagc agcgacggtt g
//
LOCUS       DATBNL010000395         3420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_183244, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000395 DATBNL010000000
VERSION     DATBNL010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183244"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VIC30_06830"
     CDS             complement(<1..370)
                     /locus_tag="VIC30_06830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804133.1"
                     /translation="MKNRKYVRPAIAGLSIALLSGAAYAYGSGGHHGQMMGQGGCEGR
                     SGHHEQGYQQRGGMMQLPSAVIEQLDLNDAQKAALFDAQTASQAMRDSMRQSMRDARQ
                     ARQQSTQSGQFDPRKMFEQQD"
     gene            562..1644
                     /locus_tag="VIC30_06835"
     CDS             562..1644
                     /locus_tag="VIC30_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HEY7804134.1"
                     /translation="MSAVFFFAAGLALLMVGANALVSGAGKLALSFGLSPLVVGLTVV
                     AFGTSAPEMAVSTSAVLAGQSDVAVGNVVGSNIFNILVILGLSALIVPLSVHIQVIRQ
                     EMPIMIGTALLFMVFALDGSISFLEGAILFGLLIVYTVFLVVQARRAPADTAAEFDAE
                     VEASPPGTLMSKWYVQIWFVVAGLIMLVQGANWLVDSAVVFARALGISEVVIGLTIVS
                     VGTSLPEVAASLAAALKGERDMAVGNVVGSCVFNTLGCIGLGGLVAGATGMSVAASIM
                     NFDLWVMLAAFFACLPVFISGREIARWEGGLFVGYYVAYVTYLIMRAQEHDALAAYSS
                     VMLTFVVPLTALTLVVLNVRRFRAGR"
     gene            complement(1662..2255)
                     /locus_tag="VIC30_06840"
     CDS             complement(1662..2255)
                     /locus_tag="VIC30_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010105476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY7804135.1"
                     /translation="MTTTHKSTIDRREFVAALVKSCPDALIVAGLGSSTYDLFAAGDR
                     PQNFYLWGAMGGAAGIGLGLALAQPEKSVVVLTGDGEQLMGLGTLATIGAQQPANLTI
                     VVLDNGHFGETGMQHSHTSLGTDLVAVSKACAIGNSHQIADSSGLKDITAAVAQLKQT
                     SLFQVMVKADEMPRALPIRDGVHIKNRFRESIGLTPL"
     gene            complement(2261..2797)
                     /locus_tag="VIC30_06845"
     CDS             complement(2261..2797)
                     /locus_tag="VIC30_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HEY7804136.1"
                     /translation="MTTSDTSVAAWKEDIFNVLKAGNIRQVTYVPDAGHAHVIQRAQD
                     DPDMQTVVLTTEEEGVAINTGAWLGGQRSVLLMQSSGVGNCINMFSLLNSCRIPFLTL
                     VTMRGEYAEFNPWQTPMSKATESCLTMMGFRVLRVTDPDEVQDVVDAALASAFEAGEQ
                     VAVLISQRLIGRKKWNKD"
     gene            complement(2839..>3420)
                     /locus_tag="VIC30_06850"
     CDS             complement(2839..>3420)
                     /locus_tag="VIC30_06850"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804137.1"
                     /translation="HGIALIVVMAVNTHAINHMRISLGYSISQASVYIMLMTGFQVLG
                     VLLGGYLGDKFEKRLVAAGCMLLHASGLFVLTYATEVYELVYFAVAHGLAWGLRGPFM
                     QAIRADYFGRRAIGMILGVSAMVGAIGQTIGPLVAGVLGDATGNYELGFTVLSGVALI
                     GAVVFWLAKRPMPPSAKGRARSMTTRDEAATAL"
BASE COUNT          697 a          878 c          975 g          870 t
ORIGIN      
        1 ggtcttgttg ttcgaacatt tttcgagggt cgaactggcc tgactgcgtg ctttgttgcc
       61 gcgcttgacg cgcatcacgc attgattggc gcatgctgtc acgcatggct tgactggcag
      121 tctgggcgtc aaagagggcg gctttctggg catcgttcag atcaagttgc tctatcacag
      181 cgcttggcag ttgcatcatg ccaccacgtt gttggtaacc ttgctcatga tgaccactgc
      241 gcccttcgca accaccttgg cccatcatct ggccatgatg accaccgctg ccataggcgt
      301 aagcggcgcc cgacaaaagg gcaatggaca agccagcgat ggcggggcga acatatttac
      361 ggtttttcat gtggattctc ctagtcgttg agtcgacaag gacattgtct gtctgacatg
      421 gtttcgagtg tgtttcggga ttggccaaag ttgtttcagt tgatttcagg tgaataccga
      481 tggcgctcgg ttgtcagatt cggttgtcaa gggttgtcag gttatagtcg ccatgaattc
      541 aatttccgag gtttgattgt gttgtctgcc gtttttttct ttgcagccgg tcttgcgtta
      601 ctgatggtcg gtgccaacgc gctggtcagc ggtgcgggca aactggcctt gtcatttggc
      661 ctctcacccc tggtggtcgg cttaactgtc gtggcgttcg gtacaagcgc accagaaatg
      721 gcagtgtcca cgagtgccgt gctagcgggt caaagcgacg tggccgtggg taacgtggtg
      781 ggcagcaata ttttcaatat cttggtgatt ttgggtttga gcgcgctgat tgtgccgtta
      841 tcggtgcaca ttcaggtgat tcgccaagaa atgcccatca tgattggtac cgccctgtta
      901 ttcatggtgt ttgcgcttga tggcagcatt tcgtttcttg agggcgccat tctgttcggt
      961 ttattgatcg tctacaccgt atttttagtg gtgcaagctc gtcgtgcgcc tgctgatacg
     1021 gcggcagagt ttgatgccga agtcgaggcg tcgccgccgg gcaccctaat gtccaagtgg
     1081 tacgtgcaga tctggtttgt tgtggcgggc ttgatcatgc tggtgcaagg cgcaaactgg
     1141 ctggttgact cggcggtggt ttttgcgcgt gcattgggga tcagcgaagt cgtcattgga
     1201 ctgacgattg tgtcggtggg tacgtcttta cctgaggttg ccgcctcgct tgccgctgca
     1261 cttaagggtg aacgtgacat ggcagtgggc aatgtcgtgg gcagttgcgt tttcaatacg
     1321 ttgggttgta tcgggcttgg cggcttggtt gccggtgcca ctggtatgag cgtggccgct
     1381 tcgatcatga actttgatct ctgggttatg ctagctgcgt tttttgcgtg tttgcctgta
     1441 tttattagcg gaagagaaat cgctcgctgg gagggcggtc tgtttgtcgg ttattacgtg
     1501 gcgtacgtga cttatctcat catgcgtgca caggaacacg acgcattggc agcctactca
     1561 tctgtcatgc tgacctttgt ggtgccatta accgccctga ccttggtggt gctaaatgtg
     1621 cgtcggttca gggctggccg ttgatttaaa gcggtgctac gttaaagagg tgtcaagcct
     1681 atcgactctc tgaaacgatt tttgatgtgc acgccgtccc gaatcggcaa agccctaggc
     1741 atttcatcgg ccttgaccat gacttggaaa agactggtct gtttcaactg tgcgacggca
     1801 gcagtgatgt cctttaggcc actgctatca gcaatctgat gcgagttgcc aatggcgcag
     1861 gctttactga ccgcgaccag atcagtacca aggctggtgt gactgtgttg catacccgtc
     1921 tcaccaaaat gcccgttatc tagcaccacg atcgtcaaat tcgcgggttg ttgcgcacca
     1981 atggtcgcaa gggtgccaag acccatgagc tgctcgccgt caccggtcag cacaaccacg
     2041 gatttttctg gttgagccaa ggccagcccc aagccgatac cagcagcacc gcccatggca
     2101 ccccagaggt agaagttttg tgggcggtca ccagcggcaa acaggtcgta ggtcgaggat
     2161 cccaggccgg ccacgatgag cgcatccggg caggacttca ccagcgctgc aacaaactcg
     2221 cggcggtcaa tggtggattt gtgagtagtc gtcatacgaa ttagtccttg ttccatttct
     2281 tgcggccaat caggcgctgt gaaatcagca cagcgacttg ttcgccagct tcaaatgccg
     2341 aggccagtgc ggcgtccacc acgtcttgca cctcatcagg gtctgtgacc ctgagcaccc
     2401 gaaaccccat catggtcagg cacgattcag tggctttgct catcggtgtt tgccatgggt
     2461 tgaactcggc gtattcgcca cgcatggtca ctagcgttaa aaacgggatg cggcagctgt
     2521 taagcaaaga aaacatgttg atacagttac ccacgccact gctttgcatg agcagcaccg
     2581 aacgctggcc accgagccag gcgccagtat taatcgccac gccttcttct tctgtcgtca
     2641 acacaaccgt ttgcatgtcg gggtcgtctt gcgcgcgttg gataacgtgg gcatgaccgg
     2701 catcaggtac ataggtgacc tgacggatgt tgccggcttt gagcacgtta aaaatgtctt
     2761 ctttccaggc tgcgacgctg gtgtctgatg ttgtcatgag ctaagccaag tgaattgaaa
     2821 atgaatcttc tgctggtctt ataacgcagt ggcggcctca tctctagttg tcatagacct
     2881 agccctgcct ttggcgctgg gcggcattgg tcgtttggct aaccagaaca ccaccgcgcc
     2941 gatgagcgcc acgcccgaca gtacggtaaa tccgagttca taattgcctg tggcgtcgcc
     3001 tagaacgcca gccaccagcg gtccgatggt ctggccaata gccccaacca tggcagagac
     3061 gcccagaatc atgccaatgg cacgacgacc aaagtagtcg gctcttatgg cttgcatgaa
     3121 aggtcctctc aacccccaag ccagaccgtg tgcaaccgca aagtagacca gttcatagac
     3181 ttcagtggcg taggtcaata caaacaagcc gctggcgtgc agcaacatac agccagctgc
     3241 aaccaagcgt ttttcaaact tatcaccaag atagccaccc agtaaaacac cgagcacctg
     3301 aaagcctgtc atgagcatga tgtagacaga ggcttgcgag atcgaatagc ccagcgagat
     3361 gcgcatgtga ttgatggcat gggtgttaac ggccatgacc acaatcagtg caatgccgtg
//
LOCUS       DATBNL010000396         2573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_164694, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000396 DATBNL010000000
VERSION     DATBNL010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164694"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VIC30_06855"
     CDS             complement(<1..578)
                     /locus_tag="VIC30_06855"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEY7804138.1"
                     /translation="MTHSVVWFKRDLRIHDHLPLARAAKRGAVTCVYFIEPELWRAPD
                     AATQHYQFILESLRDLHKQLGTIGLKLNLLVGPAAQCLDRIAQIQPFDQLYSHEETGN
                     DLTYARDKAVARWCRDHGVIWQQHPQFGVHRGPHNRDHWKAGWQQFCGAPQTPAPQQV
                     QVSAVSLIETPPTPSQLGLTEPDRPERQLGGR"
     gene            698..1654
                     /locus_tag="VIC30_06860"
     CDS             698..1654
                     /locus_tag="VIC30_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent bicarbonate transport family
                     permease"
                     /protein_id="HEY7804139.1"
                     /translation="MIDVVIFFFILGIFARLVGSDLRLPEALYETLSIYLLLAIGLKG
                     GIELSQQPMLSVLPQVVGVALLGFMVPFLLYPVLRAMRFNSPDSASIGAHFGSVSVVT
                     FAVVTAALMREGIAYEAHAPLWVAVLEAPGLIAGVLLARIGQGSSDGSTPKAGHWGGL
                     LHDVVFGKSVLLLLGGLIIGAVAGEAGTQPIKALFIDPFKGVLALFLLELGLVAGGRL
                     AEVKRYGWQVVAIGVVFPLVLSLLGAGLGLLLDLSTGGVAVMATLAASASYIAAPTAM
                     RIAVPAANAGLSITIALGIVFPFNVVIGIPLYIGLAQWVTGG"
     gene            1658..1960
                     /locus_tag="VIC30_06865"
     CDS             1658..1960
                     /locus_tag="VIC30_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY7804140.1"
                     /translation="MDKHQRTLLVIIAEANLERLLVQDVKRLGAAGYTVIDVRGGGHS
                     GVREGTWEADRTIRMEVVCDMGIADKIAESLLAEYGKHYGLTIYFSEVKVLRPNKF"
     gene            complement(2008..>2573)
                     /locus_tag="VIC30_06870"
     CDS             complement(2008..>2573)
                     /locus_tag="VIC30_06870"
                     /EC_number="4.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEY7804141.1"
                     /translation="GLLWEEVHADDVVMVDAQGQQLAGRHPVEPTAMYIHAAIHQIAG
                     KACVLHTHMPYATALTLTKAGALDTTLSQNAMRFHGRVAIDNNYNGLALDAGEGARIA
                     HAMQGADIAFLGNHGVVVCSNRMDHAYDDLYMLERACMMQVLAMSTGQPLVTVNEDLA
                     AKTGQQIDSERLQSTLFFEALRRKLKA"
BASE COUNT          483 a          642 c          788 g          660 t
ORIGIN      
        1 tgacgaccgc ctagctgacg ctctgggcgg tcaggctcag ttaaccccaa ttggcttggc
       61 gtgggcgggg tctcgatcaa cgacacggcg ctgacctgaa cctgttgggg tgcgggcgtc
      121 tggggggcgc cacagaactg ctgccagcct gctttccagt ggtcacggtt gtgtgggccg
      181 cggtgtacgc caaactgggg atgctgttgc cagatgacac cgtgatcacg acaccaacgg
      241 gccaccgctt tgtcgcgcgc gtaagtcagg tcattgccgg tttcttcatg cgaataaagc
      301 tggtcaaacg gctggatttg tgcaatgcgg tcaagacatt gcgcagccgg tcccaccaat
      361 aggttgagtt tgagtccgat tgtgccaagt tgcttgtgca aatccctgag actttcgaga
      421 atgaattgat agtgttgggt tgccgcgtcg ggcgcgcgcc atagttcagg ctcaatgaaa
      481 tacacgcacg tcacagcgcc acgcttggcc gctcgtgcca agggcagatg atcgtggatg
      541 cgcaagtcgc gcttgaacca gacaacagag tgagtcatag cgagatgcta gcgcagctag
      601 acggtattgg ggcacaaagc cggttggcgt tgttggctca ccggattagg ctaatcgggt
      661 taatctttgg ccttgtgttt agcttgtcat gcagatcatg attgacgttg tcatcttctt
      721 ctttattttg ggtatttttg cccgcctagt tggctcggac ttgcgcttgc cagaagcgct
      781 ctacgagacg ctgtcgattt atttgttgct ggccattggc ttaaaaggtg gcatcgaatt
      841 gtcgcagcag ccgatgttgt cggtcttgcc acaagtcgtg ggcgtggcac tcctgggttt
      901 tatggtgccg tttttgctgt atccggtctt gcgtgccatg cgctttaatt caccggacag
      961 tgcctcgatc ggcgctcact tcgggtcggt cagtgtggtg acctttgctg tggttactgc
     1021 ggctttgatg cgcgaaggta tcgcttatga agcccatgca ccactgtggg tagcggtgct
     1081 tgaggcgccg ggactgattg ccggcgtgtt gctcgcgcgc atcggtcagg gatcgagcga
     1141 tggatctacc cctaaagcgg gtcactgggg aggcttgttg catgacgtgg tgtttggcaa
     1201 aagcgttttg ttgctgttag gtgggttgat tattggtgca gtggccggtg aagcaggaac
     1261 ccaacccatc aaagcgcttt tcattgaccc atttaagggc gtgttggcac tctttctttt
     1321 agagcttggg ttggtggccg gtggtcgctt ggctgaggtc aaacgttatg gctggcaggt
     1381 cgtggccatc ggtgttgtct tcccgctggt tttgtcattg ttgggtgctg ggctgggatt
     1441 gttgctcgat ctctcgactg gcggtgtggc ggttatggcc accttggccg caagcgcaag
     1501 ttatattgcc gcgccgaccg cgatgcgcat tgccgtgcca gcagccaacg ctgggctctc
     1561 tattacgatt gcccttggca tcgtgtttcc gtttaatgtg gtcattggta tcccgctcta
     1621 tatcgggctt gcgcaatggg tcacgggagg ttgattgatg gataagcacc aacggacctt
     1681 attggtcatc attgccgaag ccaacctaga gcgcttactg gtgcaggacg tcaagcggct
     1741 tggagccgcg ggttacaccg tgattgatgt gcgcggtggt ggtcacagtg gcgtgcgtga
     1801 aggcacctgg gaggctgacc gcaccatccg catggaagtg gtttgcgaca tgggcattgc
     1861 cgacaagatc gctgagtcac tacttgccga atatggcaag cattacggcc tgacaatcta
     1921 cttctctgaa gtcaaggtgt tgcgacccaa caagttctag gcagtgctta tattcagtgc
     1981 ggtcgatcag cactgatcga tcaaacgcta cgctttgagt ttgcgtcgca gcgcctcaaa
     2041 aaacagggtt gattgcaggc gttcactgtc aatttgttgc ccagtttttg cggccaaatc
     2101 ttcgttgacc gtcaccaatg gctgaccggt ggacatggca aggacttgca tcatgcaggc
     2161 gcgctcaagc atatacagat catcgtaggc atgatccatg cggtttgaac acaccaccac
     2221 gccgtgatta cctaaaaaag cgatatccgc gccttgcatg gcatgtgcga tgcgcgcgcc
     2281 ttcgccggca tcgagtgcca agccgttata gttattgtca atggccacgc gaccgtgaaa
     2341 ccgcatggcg ttttgtgaga gggtggtgtc aagtgcacca gctttggtta aggtcaatgc
     2401 cgtggcgtaa ggcatgtgtg tgtgcagcac acaggctttg ccagcgattt ggtgaatggc
     2461 ggcatgaatg tacatggccg tgggctcaac cgggtgacgc ccggcaagtt gttggccttg
     2521 cgcatcgacc atcaccacat cgtcggcatg aacctcttcc cacaacagcc cac
//
LOCUS       DATBNL010000397         3805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_64664, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000397 DATBNL010000000
VERSION     DATBNL010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3805
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64664"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1585
                     /locus_tag="VIC30_06875"
     CDS             <1..1585
                     /locus_tag="VIC30_06875"
                     /inference="COORDINATES: protein motif:HMM:NF024872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804142.1"
                     /translation="VGNTILARNSLGEVLIETRGKGGYVLIAPSDGYELDGDLTDIPT
                     LDASDIDALLTNARAFDEGIQAVEVVSRPSMNGERPGDAYDRDTSAFFDLLRAHDWET
                     VKSVNYWRRPGKRNGISATWDKIPNRFYVFSSSAHPLESGKAYSPFAVFAILQHGGDF
                     AAAAKDLAARGYGDKPTNTVEKARESLQEAFTRMEAGIPPPRPFNTFTDEEKVMPEVV
                     IDGLLYRGGKMLIGAPSKARKTWLLNHLALAMSNGGDWFGFQCHRHPVLYVDLELLPA
                     DALNRVESVSKATGFWDIADLHMWTLRGYAVTLQRIKGQVIDYCRKYDVGLIILDPFY
                     RIAGGAVENSAEEIAVVLAEMESIVREANASLAMTHHFAKGNAAGKDAIDRFSGSGVF
                     ARDPDALIVLTEAEESDEQIPVFAMEMTVRSFAPPEPRAIAWQHPTWKLVRKGKVKLK
                     KAAGRPSKFGPEDLLEGIPEKGIKTKELQTFLESEKGISRSKFYELKSEAESKGMIQS
                     RNGLLMGTLSSNEIRISGL"
     gene            1785..2252
                     /locus_tag="VIC30_06880"
     CDS             1785..2252
                     /locus_tag="VIC30_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804143.1"
                     /translation="MIEFEQPEAERKRSIAKLLDNIIAKYEDKQITQVGMTRQQIEKM
                     THDMKRDNWEPPIKSAIAIKFFLLDGFKDCTVADFKKWGVSQNAAQAWAKNEPDIVVT
                     AEKAVHQGHSTAQQFMAVYNLRKNADQKNETVTHAQAKRKQATKSKRLQKTKK"
     gene            2422..2946
                     /locus_tag="VIC30_06885"
     CDS             2422..2946
                     /locus_tag="VIC30_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804144.1"
                     /translation="MLAVNVQPDVKAAVRKLGQINGDIEKAAYRGINRALTQSKTYTK
                     RELAKSIGTRKQATISQNLKHISANIRNMTGFLIGFGGPITVDKVKGTRELKGQNTVR
                     VTSRGKTRQVTHAWKSERSGKCYRKEPNQRAKGISVISVPNAMLKIVKPIQSVMVEKF
                     NAEFLRQINRAIKR"
     gene            2943..3731
                     /locus_tag="VIC30_06890"
     CDS             2943..3731
                     /locus_tag="VIC30_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804145.1"
                     /translation="MKKQYLVPGEFHFEAARGKLAKHTKVMLFGYNPVVSTTTPEVIS
                     FSGSYRTPLPDDATTLTVVSTSANDTADGTGARSVTLRGRAADGSVLVEQAAMNGTTP
                     VSTQNNFWRLTEAFVNESGTYATQSTASHAGTITVSDGTNTWAIIDSTALFPSSVSAI
                     GAYTVPLGHDAIVESISIHADNNKPMTVMMFKRENNTFTAPYDAMRLIERWDGIVGSS
                     TQPFKGGIYLPPLTDVGFLAKSTSQEGSISVDAELTLIWRGDGI"
BASE COUNT         1108 a          950 c         1011 g          736 t
ORIGIN      
        1 agttggcaat acgatactgg cacggaacag tctcggcgag gtcctgattg aaacacgagg
       61 gaaaggaggt tatgtcctta ttgcaccgtc agacggttac gagcttgacg gcgatttgac
      121 cgacatcccg accttggacg caagcgacat tgacgcactg ctgaccaacg ccagagcgtt
      181 cgacgaaggc atacaggccg ttgaagttgt ttcacgtccg tccatgaacg gggaacgccc
      241 aggggatgcg tacgatcggg acacatcggc gttttttgac ctgttgcggg ctcatgattg
      301 ggaaacggtc aagagcgtca attactggcg gcgacctggt aagcgaaacg gcatcagtgc
      361 aacgtgggac aagataccga atcgcttcta cgtcttttcc tcatctgctc atcctctaga
      421 atcgggcaag gcatactcac cgttcgccgt atttgccata cttcaacacg gcggtgactt
      481 tgcagcagcg gcaaaggact tagctgcccg cgggtacggt gacaagccga caaacacggt
      541 cgaaaaggca cgtgagagct tacaggaggc gtttacacgc atggaggcag gcataccacc
      601 gccaaggcca tttaacacgt ttacggacga ggaaaaggtc atgcctgaag ttgtcattga
      661 cggtttgctc tatcgcggcg gcaagatgct gatcggcgca ccgtcaaagg cccgcaagac
      721 atggttgctc aatcacctgg cactggccat gtccaacggc ggtgactggt ttggttttca
      781 atgtcatagg cacccagtcc tatacgtgga cttagagctg ttgccagccg acgcactgaa
      841 ccgggttgaa agcgttagca aggcaacagg attctgggac attgccgatc tgcatatgtg
      901 gacactccga ggctatgccg tgaccctgca acgcattaag ggccaggtga ttgactactg
      961 ccgaaagtat gacgtcgggc tcatcattct tgacccgttt taccgcatcg caggtggagc
     1021 ggtcgaaaac agcgccgagg agattgctgt cgtcctcgcc gagatggaaa gcatcgtacg
     1081 ggaagcaaac gcatcgctgg ccatgacgca ccactttgcc aaaggtaacg cagcaggcaa
     1141 ggacgccatc gaccgatttt cagggtcagg ggtatttgca cgcgatcccg atgcgctcat
     1201 cgtactgacc gaggccgagg aaagcgacga acagatacca gtgtttgcaa tggaaatgac
     1261 cgttcgcagt tttgcacctc cagaaccgcg tgcaatcgca tggcagcacc cgacatggaa
     1321 gctggtccgc aaaggtaagg ttaagctcaa gaaagcagca ggcaggccgt ccaagtttgg
     1381 acccgaagat ttgcttgaag gtatacctga aaagggaatc aaaacgaagg aattacagac
     1441 gtttttagag tccgaaaagg gcatttcccg gtccaagttc tatgagctca aatccgaggc
     1501 cgaaagcaag ggtatgatcc agtccagaaa tggtctgctg atgggcacct tgtccagtaa
     1561 tgaaattcga atttctggac tatgaaaccc gctaaaacaa agggctggcg gcgagttgtc
     1621 cagaaatcca gtaattgtcc agtaattaaa tcaaggatgg atgaggaggt tcctaaaaac
     1681 ccctctttag agggttttag gacccatcca agggactttg tccagtaatc cagaaatact
     1741 ataaggaata ctggactgga ctgaaatttg aaacggaggc aaaaatgatt gaatttgaac
     1801 aaccagaagc agaacgcaaa agaagcatcg caaagctact tgataacatc atcgcaaaat
     1861 atgaggacaa acagattact caagtgggga tgacccgtca gcagatcgag aaaatgactc
     1921 atgacatgaa acgcgacaat tgggagccac caatcaaatc tgccattgcg atcaagtttt
     1981 tccttctgga cggattcaag gattgtactg ttgcagactt taagaaatgg ggagttagtc
     2041 aaaatgcagc gcaggcatgg gctaagaacg aacctgatat tgtggtgacg gctgaaaaag
     2101 cagtgcacca aggtcatagc accgctcaac aatttatggc cgtatataat ctgcgcaaaa
     2161 atgcagacca aaagaatgaa accgtaacgc acgcacaggc taagcgtaag caggcaacca
     2221 aatcaaaacg cttgcaaaaa actaaaaaat gacatacagg acaggcatgg gaacacgagg
     2281 aaacttaaag gacacaaagc aggtcgttgg cattgtcatg gaaaagaccg agctggagaa
     2341 gttaagggaa cgagccaagc ttgaaggccg atccgtcagc aacatgggta tgcaaatcat
     2401 ccgagggaga gccaagccga tatgctagcg gtcaacgtac agccagacgt taaggcagcc
     2461 gtgcgcaagc tggggcagat taacggcgac attgaaaaag ctgcttacag gggaatcaac
     2521 agagcgctca cacaatccaa gacgtacaca aagcgcgagc tggctaagtc aatcggcacg
     2581 cgcaagcagg caacgatcag tcaaaaccta aagcacatta gcgccaacat ccgaaacatg
     2641 actggctttc tcattggctt tggtggaccg atcacggttg ataaggttaa gggtacacga
     2701 gagctaaaag ggcagaatac cgtacgcgtt accagcagag gcaaaactag gcaggtcacg
     2761 cacgcatgga aaagcgagcg ctcaggcaaa tgctaccgca aggaacctaa tcaaagggcc
     2821 aaggggatca gcgtcatttc cgtaccaaat gcgatgctaa agatcgttaa gccgattcag
     2881 tccgtaatgg ttgaaaaatt taacgctgag tttctgagac aaatcaacag agcaatcaaa
     2941 cgatgaaaaa acaatatcta gtcccaggcg aattccattt tgaggcagca cgcgggaagc
     3001 tggccaaaca tacgaaggtc atgctgttcg gttacaatcc agttgtcagc acgaccacac
     3061 ccgaagtcat ttcattctct ggatcgtacc gaacgccatt gccagatgac gcgacgaccc
     3121 tgaccgttgt cagcacatca gctaacgaca ccgcagatgg cacgggtgca agaagcgtca
     3181 cgttgcgagg aagggccgca gacggctctg tactcgtcga acaggctgca atgaatggta
     3241 caaccccagt ttcgacacaa aataattttt ggaggcttac agaggccttt gtgaacgaat
     3301 cgggcacata cgccactcaa agcacagcca gccacgcagg aacgatcaca gtcagcgacg
     3361 gcacaaacac atgggcaatc attgactcaa cagccttatt cccgtcctcg gtctcagcca
     3421 ttggagcgta caccgttcca cttggccacg atgccatcgt tgaatccata tccatccacg
     3481 ccgacaacaa caagccgatg acggtcatga tgttcaagcg cgagaacaac acgtttaccg
     3541 caccgtacga cgccatgcga ctcatcgaac gatgggacgg catcgtaggg tcaagcacgc
     3601 aaccattcaa gggcggcatc tacctgccac cactgaccga cgtcggattc ctcgctaagt
     3661 caacgagtca ggagggcagc atcagcgttg acgccgagct gacactcatc tggagaggtg
     3721 acgggatatg atcgtgggcc ataagacatt gggcatcaat cgcatgggtc cttcctgccg
     3781 aaacgctggg ggtccgcccc tcggt
//
LOCUS       DATBNL010000398         1923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_34660, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000398 DATBNL010000000
VERSION     DATBNL010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34660"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1526)
                     /locus_tag="VIC30_06895"
     CDS             complement(<1..1526)
                     /locus_tag="VIC30_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M61"
                     /protein_id="HEY7804146.1"
                     /translation="MMSQKLHYTVDPHDLAGHRLKVTLSIPNTTGRTQVVGLPAWIPG
                     SYLIRDFSRHIELIRGRHGGQWHRPRKLDDHHWAFDDCQGSLVVEIVVYAWDLSVRGA
                     HVDDSHAFFNGTSVFLLAKGLEHVPCTVDIKRPVVNSRWRAYTSMPAASGRVPAGLMG
                     RFVAPDYDALIDHPFELGTPQVVRFTACGAPHRLVFTGSAPNLDLSRIARDAKRICEA
                     QIKLFDPQNARAAFLDSAPEYTFMTMVTGNGYGGLEHRASTALVCSRQDLPTLHQQAQ
                     PEGYVNFLGLVSHEYFHTWHVKRIKPAAFVPYDLTKPNHTRLLWIFEGFTSYYDDLML
                     VRSGAIDLKTYLKQLAKTITAVHAAPGRLKQSLASSSFDAWTKYYKQDENAPNAISSY
                     YAKGALVALGLDLVIRQRSQQQFSLDDVMRALWLTYGERFYQDQPKGLSETGFAKLVL
                     QTTGVNIHDELNQWVHDTADVPLKGLLQTQGIELQWICQDTTPSLGATFKPIGEFLAL
                     R"
     gene            1579..>1923
                     /locus_tag="VIC30_06900"
     CDS             1579..>1923
                     /locus_tag="VIC30_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY7804147.1"
                     /translation="MSENLILQTIEGRVAILTLNRPKALNALNDALMDELGAALAKLD
                     ADDEIGAIVLTGSEKAFAAGADIGAMSTWSYMDVYQSEYITRNWDPIARTRKPIIAAV
                     AGYALGGGCELAM"
BASE COUNT          436 a          484 c          557 g          446 t
ORIGIN      
        1 cgtaaggcca aaaactcgcc tatcggtttg aacgtcgcgc ccaatgaggg tgtggtgtct
       61 tggcatatcc attgcagctc aatgccctgt gtttgcagta aacctttcag cggcacatcg
      121 gcggtgtcgt gaacccattg attcagctca tcgtgaatgt tcaccccggt tgtctgcaag
      181 acaagtttgg caaaacccgt ttcgctcaga cctttgggtt ggtcctgata aaaccgctca
      241 ccataggtca accatagcgc gcgcatgaca tcgtctaagc tgaattgctg ctggctgcgt
      301 tgccgaatca ccaggtctag gccgagcgcc accagcgcgc ctttggcgta gtaactgctg
      361 atcgcattgg gtgcgttctc atcctgcttg taatacttgg tccaggcatc aaaggaactt
      421 gaagccaatg attgcttcag gcgcccaggt gcggcatgca ccgcggtgat ggttttagcg
      481 agttgtttga gataggtttt taaatcaatc gcaccactgc gcacgagcat caggtcgtcg
      541 taatacgagg tgaagccttc aaagatccag agcagccgcg tgtggttggg tttggtgagg
      601 tcatagggta caaacgctgc cggcttgatc cgtttgacgt gccaggtgtg aaagtactcg
      661 tggctgacta gacccaggaa gttgacatag ccttctggct gcgcctgttg atgcagggtt
      721 ggcaggtctt gacgtgagca cactagcgcg gtgctagcgc gatgctccaa gccgccatag
      781 ccgttgccgg tgaccatggt catgaaggtg tactcagggg cgctatctaa gaacgctgcg
      841 cgcgcatttt gcgggtcaaa caatttgatc tgcgcctcgc aaatgcgctt ggcatcacgt
      901 gcaatgcggc tcagatctaa gttgggcgcg ctgccggtaa agaccagtcg gtgtggtgcg
      961 ccacaggcgg taaatcgaac aacctgcggt gtaccaagct cgaacgggtg atcaataagt
     1021 gcgtcgtagt cgggtgccac aaacctgccc atcaggccag cgggtacacg accactggct
     1081 gctggcatgc tggtataagc gcgccagcga ctgttaacga caggacgttt gatatccacg
     1141 gtgcagggta catgctcaag accctttgcc aataaaaaca ccgacgtgcc attgaaaaaa
     1201 gcgtgcgaat catcaacgtg cgcgccgcgc acagataggt cccaggcgta caccacgatc
     1261 tcaacaacca gactgccctg acaatcatcg aaggcccaat ggtggtcgtc aagtttgcgg
     1321 ggtcggtgcc attgcccgcc atgtcggcct cgaattagct caatgtgtcg tgagaagtca
     1381 cggataagat agctgccagg aatccatgcc ggcaagccta caacctgagt gcgaccggtg
     1441 gtgtttggga ttgaaagcgt gactttgagc ctgtgaccgg cgaggtcgtg agggtcaacg
     1501 gtatagtgta gtttttgaga catcatgctg gtatcttaga gctaaatcgc aggttcacaa
     1561 aaatgacagg agaaaggtgt gagtgaaaat ctgattttgc agaccattga aggtcgcgtt
     1621 gccattctga cgttgaaccg acccaaggcg ctaaatgccc ttaatgatgc cttgatggat
     1681 gagctcggcg cagccttggc caaacttgat gccgatgatg agatcggcgc catcgtcttg
     1741 actgggagtg agaaagcttt tgctgctggt gcagacattg gtgcgatgtc tacctggtct
     1801 tacatggacg tgtatcaatc ggaatacatt acgcgtaact gggatcccat tgcacgtacc
     1861 cgcaagccca tcattgctgc tgtcgcgggc tatgcactag gcggcggttg cgaattggcg
     1921 atg
//
LOCUS       DATBNL010000399         1964 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_84861, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000399 DATBNL010000000
VERSION     DATBNL010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84861"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..963)
                     /locus_tag="VIC30_06905"
     CDS             complement(<1..963)
                     /locus_tag="VIC30_06905"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006383946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEY7804148.1"
                     /translation="MNSSIRIIRHLPAHPPLAASALTIGNLDGVHLGHLAMLEHVAKA
                     AADRSLAPTVLTFHPHPRAYFAKRQGSTHQAPLQINSLREKLTRIASAGIEQIALLPF
                     NEAMASMAPADFVEHLLYGHLRMRWLMIGPDFRFGHRRGGDLTLLRQMSQDLGFELSV
                     LSEVVDANDQRISSSQVRHALQQGDMASASQLLGGPWRVTGHVIHGKKLGRTLGFPTL
                     NLRVSNHTAARFGIYVVRVHGLADQPLPGIASLGRRPTVDDDLGVLLEVHVLDADVQA
                     YGKLVSIELLQHVRDEEKFPDLTTLTAAMQRDRQHAMDYFAHHGL"
     gene            1025..1684
                     /gene="purN"
                     /locus_tag="VIC30_06910"
     CDS             1025..1684
                     /gene="purN"
                     /locus_tag="VIC30_06910"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEY7804149.1"
                     /translation="MSNSEAAHRRFVVLISGRGSNMQQIITQAQTGDWPAAFVRVISN
                     ESDAPGIDWAKAQGLPTAVLPHRDFASRDAFDARLADMIEQEAPDYVLLAGFMRILTP
                     AFVSRFKNKLINIHPSLLPDFTGLHTHKRALEAGVARHGCTVHMVTDQLDHGPIIAQA
                     ALAVRANDTPDSLEQRVLRAEHLLYPQVVQWLAQGLVQVNESGQVNVTGVSARHLWIE
                     S"
     gene            1681..>1964
                     /locus_tag="VIC30_06915"
     CDS             1681..>1964
                     /locus_tag="VIC30_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEY7804150.1"
                     /translation="MKDRSSNAYQRRRPSSKPRETSSEAGTGRLGQVTGLLKQVLTWR
                     EAADTVLSRYFRENRALGARDRSQVADAVFDVLRHLRRYRHDAQSWPGNH"
BASE COUNT          434 a          558 c          546 g          426 t
ORIGIN      
        1 taatccatgg tgcgcaaagt aatccatcgc gtgctggcgg tcgcgctgca tcgcggctgt
       61 caacgtagtc aagtcgggaa atttctcttc gtcccgcacg tgctgcagga gctcaattga
      121 tacaagttta ccgtaggcct gtacatcggc atcgagtaca tggacctcta gtagcacccc
      181 gaggtcatca tcgaccgtgg gacgcctgcc aagactggca atgccgggca aaggctggtc
      241 tgctagacca tgcacacgaa caacataaat gccgaaacgc gcggcggtgt ggttgctcac
      301 acgcaagttc agggtcggaa atcccagcgt gcgcccaagc ttcttgccgt ggatgacatg
      361 accagtcacg cgccatgggc cgccgagcaa ttggctcgcg ctcgccatgt cgccttgttg
      421 aagcgcatgt cgcacttgtg agcttgagat gcgttggtca ttggcatcga ccacctcaga
      481 caagaccgag agctcaaacc ccaagtcctg ggacatttgc cgcagcagcg tcaaatcgcc
      541 gccgcgtcgg tgtccgaacc taaagtcagg cccaatcatc aaccagcgca ttcgtaggtg
      601 cccgtatagc aaatgctcta caaaatctgc tggtgccata ctggccatgg cctcattaaa
      661 gggcagcaag gcaatctgct cgatgccagc actggcaata cgcgtgagtt tttctcgtag
      721 gctattgatc tgcagcggtg cctgatgtgt actgccttgg cgctttgcaa agtaggctct
      781 tggatgcggg tgaaacgtca acaccgtggg cgcaagcgat cgatcggctg cggctttagc
      841 tacgtgttca agcatggcca gatggccaag atgcacaccg tcaagattgc caatggttag
      901 cgcgctcgca gccagaggag ggtgagcggg taggtgtcgg atgatgcgta tggatgagtt
      961 cacggatggc agtttacaat cttcttttaa cctgtcttca aaatatgccg gctaggcacc
     1021 attcatgagc aattcagagg ctgcgcaccg tcgattcgtg gtgttgatat cgggacgcgg
     1081 cagcaatatg cagcaaatca tcacgcaagc gcaaaccggc gactggccag cagcgtttgt
     1141 gcgcgtgatt tctaacgagt ctgatgcgcc aggcatcgat tgggctaaag cccagggctt
     1201 gcctactgct gtattgccac accgtgattt tgcctcacgc gatgccttcg atgcgcgttt
     1261 ggccgacatg attgaacaag aagcgccaga ttatgtcttg ctagccggat tcatgcgcat
     1321 tctgacacca gcatttgtgt cgcgttttaa gaacaagctc atcaacattc acccctcgtt
     1381 gctacctgac ttcacggggc ttcacaccca caagcgtgcg cttgaggccg gtgtagcaag
     1441 gcacggttgc accgttcaca tggtcaccga tcagttggat catgggccca tcatcgcgca
     1501 agccgcgctt gccgttcgag ccaacgacac ccccgattcc ttggagcagc gggtgctacg
     1561 ggccgaacat ctgctctacc cacaagtcgt tcagtggctc gcacaaggcc ttgtgcaagt
     1621 caacgaatca ggccaggtta acgtcaccgg cgtgtcagca cgccacttat ggatcgaatc
     1681 atgaaagatc gaagtagcaa tgcttaccaa cgacgtcggc cttcaagcaa gccccgtgaa
     1741 acatcctcag aagccggtac tggacgactg ggccaagtca ccggcttgct caagcaggtg
     1801 ctaacgtggc gtgaggctgc tgacacggtg ctgtcgcgtt actttcgtga gaaccgcgcc
     1861 ctaggcgcgc gtgatcgatc ccaggtcgct gatgccgtat tcgatgtgct gcgccacttg
     1921 cgccgctatc gtcatgacgc acaatcctgg ccaggtaatc acga
//
LOCUS       DATBNL010000400         5102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_164791, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000400 DATBNL010000000
VERSION     DATBNL010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164791"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..96
                     /locus_tag="VIC30_06920"
     CDS             <1..96
                     /locus_tag="VIC30_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003811148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HEY7804151.1"
                     /translation="GSKAMDMRLTRAAVDLKLLIEQMREQIQNIE"
     gene            complement(194..1528)
                     /locus_tag="VIC30_06925"
     CDS             complement(194..1528)
                     /locus_tag="VIC30_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008247696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HEY7804152.1"
                     /translation="MAFELTRKLSVTRTLSSGERVSVGVLAQNRQGVFFQYEAGYLEQ
                     FGNLSPFLLRADAQIQMAPKQPHHGLHGVFGDCLPDGWGLLLQDRVLRQHGILPTQVT
                     AMDRLAFVGHRGTGALAFSPLSPYSDQGITDLDIASLGLEAQALFDQSVMATANHHLL
                     QAGTQSAQGVLAALAAGGSSGGARPKAQIYMPSGDTKQARLNAEPGDQAWLVKFTSSS
                     LALGHEEGLCEAVYLQMASDAKCQPPTWQLMDAPARSGALAWLAVKRFDYISSELAAG
                     RLHMHSACGLLDVDFRIPSLDYEDLIKATRRLCKSPSAIQLQFRRAVFNLLAANQDDH
                     SKNWAFLQTDDGQWQPAPFYDVTYSPHPFNEHATAFGGHGKAPPIEVMQKLAASAGFG
                     NWQQAKQCIQEVAQAIAQFPDLARQQGISEITLSAIEKTLAQRRKENAALLR"
     gene            complement(1518..1835)
                     /locus_tag="VIC30_06930"
     CDS             complement(1518..1835)
                     /locus_tag="VIC30_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008247694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7804153.1"
                     /translation="MLLSLIDDTDVSRAFADHLRGLRKQAKFSRDALAQRSCVPAATI
                     KKFELTGQISFRQLLLLWQTLDSLDRLYQLTQPTSPASLTSPNAEDRAMPKSIDEVLK
                     NGF"
     gene            complement(2064..2825)
                     /locus_tag="VIC30_06935"
     CDS             complement(2064..2825)
                     /locus_tag="VIC30_06935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006219675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804154.1"
                     /translation="MDKEQQHPRVAVVTGAGSGIGRAVSLALAADGFDVVMAGRRADA
                     LAQTADLGPRDRLHAHVTDVADHEQVKALFEFVRTRFGRLDVLFNNAGRGAPAVPMEE
                     LPIETWLDVVNVNINGMFFCASQAIALMKNQSPQGGRIINNGSISAHAPRPFSAPYTT
                     TKHAVTGLTKSISLDTRPYGIACTQIDIGNAATEMTDRMAAGILQADGSTRVEPRMDV
                     NHVAQAVVQIVNYPLETNVQFMTIMATNMPFVGRG"
     gene            2944..3576
                     /gene="gmk"
                     /locus_tag="VIC30_06940"
     CDS             2944..3576
                     /gene="gmk"
                     /locus_tag="VIC30_06940"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003811129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEY7804155.1"
                     /translation="MKKNQPAGNVYLVTAPSGAGKSSLVNALLESDPGLELSVSCTTR
                     EPREGEVNGRDYYFVSQDEFKRMRDNDELLEWAQVHDNYYGTPRAPLAKALELGRDVL
                     LEIDWQGAAQIRKLLIGVTGVFILPPSIDALESRLRARGKDSDAVIAKRMAAASSEIA
                     HAHEFEYVIINQEFSVALQQLEQIISSARLRYARQAIMHPALFDSFGLPR"
     gene            3787..3990
                     /gene="rpoZ"
                     /locus_tag="VIC30_06945"
     CDS             3787..3990
                     /gene="rpoZ"
                     /locus_tag="VIC30_06945"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEY7804156.1"
                     /translation="MARITVEDCLDQIPNRFKLTLAATYRARELAQGHAPRLDSRDKP
                     TVVALREIAAGLTGTEMLRKVPT"
     gene            4005..>5102
                     /locus_tag="VIC30_06950"
     CDS             4005..>5102
                     /locus_tag="VIC30_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY7804157.1"
                     /translation="MGFPGLRTASSGLLSAIKVGSRFGRRAKTSPSTPDDLQTIPRLD
                     KPTEPASITHLQKVISGYLSKKDVARVREAYRFSDQAHLGQFRSSGEAYITHPIAVTE
                     VCAGWKLDADALMAALLHDVMEDQDIPKTELAEKFGSDVAELVDGLSKLDRLDFATKA
                     QQQAESFRKMLLAMARDLRVILIKLADRLHNMRTLGAVSPEKRRRIARETLDIYAPIA
                     NRLGLNAVFRELQDLCFEAMYPNRYAVLHRAVLAARGNRREVLTKIFDSVRAALPAAG
                     IEAEVSGREKTLYGIYHKMTEQKKSFSDVLDIYGFRVVVHTLPECYLALGVLHQLYRP
                     VPGKFKDYVAIPKVNGYQSLHTTLVGPYGTPV"
BASE COUNT         1195 a         1365 c         1325 g         1217 t
ORIGIN      
        1 ggctcaaaag caatggacat gcgcttaacc cgtgcagcgg ttgacctgaa gttgctcatt
       61 gaacaaatgc gagagcagat acaaaacatt gagtgagcct cggctgcgag cgttttttac
      121 gggttgagcc tgtcaggtcg cgctagataa ggttttagtg cagcaacttt tttcgcctta
      181 atttcacagt cttttagcgc aatagtgccg cgttttcttt cctgcgctgc gccaatgtct
      241 tctcaatggc agaaagcgtt atttcactga taccttgctg cctggccaga tcaggaaact
      301 gagcaatcgc ttgcgccact tcttggatgc attgttttgc ttgctgccaa ttgccaaacc
      361 ctgcgcttgc ggcaagcttt tgcatgacct ctattggtgg cgctttaccg tggcccccaa
      421 atgctgtggc atgctcatta aatgggtgtg ggctgtaggt cacgtcgtag aaaggcgctg
      481 gttgccattg accgtcgtca gtctgcaaaa aagcccaatt tttgctgtgg tcgtcctggt
      541 tggctgcaag caaattgaat acagcacgtc gaaactgcaa ttgaatagcc gatggtgact
      601 tgcacaatcg gcgggtggct ttgatgaggt cttcgtagtc aagacttggt atccgaaaat
      661 cgacatccaa aagtccgcaa gcgctatgca tgtgcaagcg tcctgcagcc aattcgcttg
      721 aaatatagtc aaaacgttta acagcaagcc acgccaacgc accgctgcgt gccggcgcat
      781 ccatgagctg ccaggttggc ggctgacatt tggcatcact ggccatttgc aaatacaccg
      841 cttcacacaa accctcttcg tgcccaagtg ccagactgct agaagtgaat ttgactagcc
      901 atgcttgatc gcccggctct gcattcagtc gagcttgctt ggtgtcgcca gatggcatgt
      961 agatttgagc ttttggccgc gcaccaccgg agctgccacc cgcggcaagt gcagccaaca
     1021 caccttgagc actttgcgta cccgcttgca aaagatgatg gtttgccgtt gccatgaccg
     1081 attgatcgaa cagcgcctga gcctctagtc ctaagcttgc tatgtcaaga tccgtgatgc
     1141 cttgatctga atatggcgaa agcggagaaa acgccaaagc ccccgtgcct cggtgaccca
     1201 caaaggccag tctatccatg gccgtcactt gtgtcggcaa tatgccgtgt tgacgcagca
     1261 cacggtcctg caaaagcaag ccccatccat caggcaggca atcgccaaat acaccgtgca
     1321 agccatggtg tggttgtttt ggggccatct ggatttgtgc atccgctctt aagaggaacg
     1381 gagacaggtt tccaaattgc tcgagatagc ctgcctcata ttgaaagaaa acgccttgtc
     1441 ggttttgtgc caatacgcca accgacacgc gctctcccga gcttaaggtg cgagtgacac
     1501 ttaactttcg agttaactca aaagccattt ttgagaacct catcaatgct ctttggcatc
     1561 gcacgatctt cggcgttggg tgaagtcagt gaggccggtg aggtcggttg agtcaattga
     1621 tacaggcgat ccaatgaatc aagcgtctgc cacagcaaca gcagttggcg aaacgagatt
     1681 tggccggtca actcaaattt cttgatcgtt gctgcgggca cacaactgcg ctgtgcgagc
     1741 gcatcgcgcg agaactttgc ctgtttgcgc aatccccgca agtggtcggc aaacgcgcga
     1801 ctcacatcgg tatcgtcaat caaggacaag agcatcagcg accccaaaaa agatataata
     1861 gtatctatta tatactattt ttatccatta tagacactat gatgtctaaa taaaggtcgg
     1921 tcttcaccta tagccgtgcg cttaatgcat cgaggaaata tgtatcaaag aaatgcctcg
     1981 aggaaagcat ctatcaaagc gcatctactg tcgctggcat tgtcgatcgc gactttccta
     2041 gtgccgcgac aacatgttct accctacccc ctgccaacaa acggcatgtt ggtggccatg
     2101 atcgtcatga actgcacgtt ggtttctagt gggtaattca caatctgcac cacggcttgg
     2161 gccacatggt tgacatccat acgcggctcc acgcgggttg atccatcagc ctgcaaaata
     2221 ccggcagcca tccggtcagt catctcggta gcggcattgc caatgtcgat ttgggtgcag
     2281 gcaatgccat aggggcgcgt gtctagcgaa atcgacttgg tcaggccagt cacagcatgc
     2341 ttggtggtgg tgtaaggcgc cgaaaacggt cgaggcgcat gggctgagat cgaaccgttg
     2401 ttgatgatac gaccgccctg gggagattgg tttttcatga gggcgatggc ttggctggcg
     2461 caaaagaaca taccgttgat attgacgttg accacatcaa gccaggtttc aattggcaac
     2521 tcctccattg gcacagctgg tgcaccgcgc ccggcgttat taaacaaaac gtcaagacgg
     2581 ccaaaccgcg ttcgaacaaa ttcaaataac gccttgacct gctcatggtc ggcaacatcg
     2641 gtgacgtgcg catgcaagcg atcacgcggc cccaagtcag cggtttgagc caaagcgtcg
     2701 gcacgacgac ctgccatgac cacgtcaaac ccgtcggcgg ccaaggcaag cgacacggcg
     2761 cgcccgatgc cactgccggc gccagtcacc actgcaacgc gtgggtgttg ttgttctttg
     2821 tccatttgca cactgcactc ctttgttcac aacgccatgg aaactgtgcg agccaggctg
     2881 taataagcgc ccagtattct gctatgctcg ccgaatcatt gtagagacta gtggcacttt
     2941 gttgtgaaga agaatcaacc tgccggaaac gtgtatctgg ttaccgcacc gagtggtgcg
     3001 ggtaaatcga gtttggttaa cgccttactt gaaagtgacc cgggacttga actgtctgtc
     3061 tcatgcacca cgcgcgagcc gcgcgaaggc gaagtcaatg ggcgtgacta ctactttgtc
     3121 agtcaagacg agttcaagcg catgcgagac aacgatgagc tactcgagtg ggctcaggtg
     3181 cacgacaact attacggcac accgcgcgcg ccactggcca aagcccttga gcttggacgc
     3241 gatgtactgc ttgaaattga ttggcaaggt gccgcgcaga tccgcaagct tttgattggt
     3301 gtgacgggtg tttttatatt gcctccctca atcgatgcgc ttgaaagtcg cttgcgcgcg
     3361 cgcggcaagg atagcgatgc tgtcattgcc aagcgaatgg cggccgctag cagtgagatc
     3421 gcgcatgccc atgagttcga atatgtgatt attaatcaag aatttagcgt cgctttgcaa
     3481 caacttgagc aaatcatttc gagcgcgcga ttacgttatg cacgacaagc gatcatgcac
     3541 cctgccttat tcgattcgtt tgggctgccg cgctaagtct gaattcgaac gactgttgag
     3601 gtcctacgac cgccgcgtcg caaattgatc acatatctgc taataaagcc tgtgaaacca
     3661 acgccgtatc cacgacacgc cgcctgttca cgtgtaagat accaatattg ctgaaacgtt
     3721 ttgttttgtt tcaatatttt cttaatttgc taatttatct agctcacttt ttgtctggag
     3781 tgccacatgg cgcgcatcac cgtagaagat tgtttagatc aaatcccgaa ccgtttcaag
     3841 ctgacgttgg cagccaccta tcgtgcccgt gaattggctc aaggtcacgc accgcgtctt
     3901 gacagccgtg acaagccgac cgtggttgcg ttgcgtgaaa tcgcggctgg actgactggc
     3961 acggaaatgc tgcgtaaggt acctacttaa tgaggtaatg catcatgggt tttccggggc
     4021 ttcgtaccgc atcaagcgga ttgctctcgg caatcaaggt cggctcgcgc tttgggcgcc
     4081 gagctaaaac cagcccgagc accccggatg atcttcagac catcccaagg cttgacaaac
     4141 ccaccgagcc tgcatcgatt acccaccttc agaaggtcat ctctggctat ttgtctaaaa
     4201 aagacgtggc tcgagtcaga gaggcgtatc ggttttcgga ccaagcccat ttaggccagt
     4261 ttcgctcgag tggcgaggcc tacattacgc accccattgc tgttacagaa gtctgcgcag
     4321 gctggaagct cgatgccgat gccctgatgg ctgccctgtt gcacgatgtc atggaagacc
     4381 aggacatccc aaaaacagag ctcgctgaaa aatttgggtc tgatgtcgct gagcttgtcg
     4441 atgggctatc caaacttgac cggcttgact ttgccaccaa ggcacaacaa caagcggaga
     4501 gtttccgcaa aatgttgttg gccatggcac gcgatctgcg cgtcatcctc atcaagctcg
     4561 ctgaccgtct gcacaacatg cgtaccttgg gtgcagttag ccccgagaaa cgacgccgca
     4621 ttgcccgcga gacactcgac atttatgcgc ccattgccaa ccgtctgggc ttgaatgcgg
     4681 tgtttcggga gctgcaagat ctgtgttttg aagcgatgta ccccaaccgc tacgcggtgc
     4741 tgcatcgcgc ggtgcttgcc gcgcgtggca accggcgcga ggttttgacc aagattttcg
     4801 attcggtgcg agcagcattg ccagcagctg gtatcgaagc cgaagtctct ggccgagaaa
     4861 aaaccctcta cggcatctat cacaagatga ccgaacaaaa gaagtccttc tcggatgtat
     4921 tggacattta cggctttcgt gtggtggtgc acaccctacc cgagtgctac ctggcgttag
     4981 gtgttttgca tcaactctat cgccctgtgc caggcaagtt caaagactac gtcgccatcc
     5041 ccaaagtcaa cggttaccag tccttgcaca caaccttagt aggcccgtat ggcacaccgg
     5101 tt
//
LOCUS       DATBNL010000401         5550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_114229, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000401 DATBNL010000000
VERSION     DATBNL010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5550
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114229"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1682
                     /locus_tag="VIC30_06955"
     CDS             <1..1682
                     /locus_tag="VIC30_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006298078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804158.1"
                     /translation="VGLVGAVVEILLLRRIYRSPELFQLLATFAVVLVVKDAALVIWG
                     PEELLGPRAPGLEGAVSVLGQPFPAYDVFLLVVGPAVLAGLWWLMHRTNWGRAVRAAT
                     EDREMLAALGTNQAWIFTAVFALGAGLAGLGGALQLPREPASLELDLSILGSAFVVVV
                     VGGMGSLTGAFVAAVVVSVVKALCIWLGVVTVWGIELPFPKLTLVAEFLVMAAVLIWR
                     PWGLFGKPMTASVYAEPEAAWRLPTSAQGGLTWVVLLVAFALPWWSTSFPYAVFVATD
                     MVIAVLFAASLHLLVGPGGMHSFGHAAYYGLGAYGAALLVTSAGLPMPLALVLAPLAA
                     TLGALLFGWFSVRLSGVYLAMLTLAFAQIVWSVAFQWDAVTGGSNGIIGLWPPDWLAD
                     PNRFYWLALVCMALGIWLLRRVLFSPFGYAMRAARDSNLRAQAIGIDVHRVQWMGFVV
                     TGGVAGLAGALFAFSKGSIAPDVLGVAQSINGLVMVMLGGVQTLAGPVVGASVFVWLS
                     DTVSQHSDYWRAALGAIILLLVLLFPRGLAGYGQWVFGQWKFGQGQRGTTS"
     gene            1679..2428
                     /locus_tag="VIC30_06960"
     CDS             1679..2428
                     /locus_tag="VIC30_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005800873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804159.1"
                     /translation="MSLLDVRNLAKAFGGVQAVQGVDLTVNAGEMVALIGPNGAGKST
                     TFNMINGQIAPDAGEIALLGQSLIKRPPRTIWRLGVGRTFQTASVFSSMTVLENVQMV
                     MLSHDRRLANLFARAGDYRQDDAMAVLAQVGLGEQAERSCVSLAYADLKRVELAMAIA
                     NEPKLLLMDEPAAGMAPGERQRLMALTRDLAKDKHMGVLFTEHSMDVVFGFADRVLVM
                     ARGALIAQGTPQAVQADAEVARAYFGKGVMR"
     gene            2425..3180
                     /locus_tag="VIC30_06965"
     CDS             2425..3180
                     /locus_tag="VIC30_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017522845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804160.1"
                     /translation="MTGPGSNPILTVSQFNAWYGPAQALFDVDLTLNQGEVVAIMGRN
                     GAGKSTLLKTLMGLVPKSRGQASLFGQSILGLPTHRLARMGLGFVPQERRIFTGLTVR
                     ENLQMGKQGAHHWPDGRVGPCWDQASLFEHLPNLAELLDRMGNQISGGEQQMLSLART
                     LMGNPLVLLLDEPSEGVAPIIVERMLEMVIALKEQGVSIVLSEQNLAFAQAVSDRVYM
                     LEQGKVVFADTMAALLADSSVSERYLGVAGGGG"
     gene            3269..5017
                     /locus_tag="VIC30_06970"
     CDS             3269..5017
                     /locus_tag="VIC30_06970"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011804548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016813 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear
                     amidines [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/carbamoylase family amidase"
                     /protein_id="HEY7804161.1"
                     /translation="MHVSLEQFNEASLDDARQWLEGIYAPIDTSASAAWITDQAIEQR
                     PFKTVAALCQTMLQVVRRASQPQYMALIAAQPDVVAACQTLFADQSSAQDLQALQTLS
                     EDYRSRFGFGFVLDLAGPRGVGLMLADVTAALERRLRNPVDVEVREALREIHRAAQGR
                     VNALFNTQPVLGNQLWDWCEALAVHSEPSYAERGELTVTYLTQAHQACAAHIAQLMRE
                     VCGFDEVHIDAVGNVVGVYHGQDKNAKRLLTGSHYDTVRNGGKYDGRLGIFVPMLCVR
                     ELAQQSRRLPFGIEVVAFAEEEGQRYKAVFLGSGALTGEFDTRWLDQVDSDGISMRQA
                     MQDAGRNIDDIATLKRDANQYLGFVEVHIEQGPVLTELDLPLGVVTSINGSARFMGEI
                     RGLASHAGTTPMGMRRDAAVAAAELALYVETRATTVPDLVATMGMLEVPNGSVNVIPG
                     RCRFSLDVRATTNEVRDACVADIRGELQQICQRRGVQFELEEFMRASAAPSSPAWQSR
                     WEASVKALGLPVHHMPSGAGHDAMKLHNIMPQAMLFVRGLNGGISHNPLEMTTNDDAQ
                     LCVEAFAQLLDQLAKE"
     gene            5225..5392
                     /locus_tag="VIC30_06975"
                     /pseudo
     CDS             5225..5392
                     /locus_tag="VIC30_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007745354.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            complement(5435..>5550)
                     /locus_tag="VIC30_06980"
     CDS             complement(5435..>5550)
                     /locus_tag="VIC30_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021141233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7804162.1"
                     /translation="MAKSKNSLWSPSYFASSTGEAPIEVLKRYIQEQNRPE"
BASE COUNT         1025 a         1335 c         1815 g         1375 t
ORIGIN      
        1 gggtcgggtt agttggcgcc gtcgttgaaa tccttttatt gcgccgtatc taccgttctc
       61 ctgaattgtt tcagctcttg gccacctttg ctgtggtgtt ggtggtcaaa gacgcggcac
      121 tcgtgatttg gggtcctgaa gagctgctag gtcccagagc gccagggctt gagggcgctg
      181 tcagtgtgct ggggcagccg tttccggctt atgacgtgtt tttgttggtg gtggggcctg
      241 cggtgttggc gggcttgtgg tggctgatgc atcgaacaaa ctgggggcgt gcggtgcgtg
      301 cggctacgga agaccgcgag atgttggccg ccctcggtac caatcaggcg tggattttta
      361 ccgccgtgtt tgcgctcggt gcaggcttag cgggattggg cggcgctttg caactacccc
      421 gtgagccggc aagcctagag ctggatctgt cgatactggg gtcagcattc gtggtggtgg
      481 tcgttggcgg catggggtca ttgacaggcg cgtttgtagc tgcggtcgtg gtctcggttg
      541 ttaaagccct gtgtatctgg ctcggtgtgg tgacggtgtg gggcattgaa ttgccgtttc
      601 ccaagctcac gctggtcgct gagtttctgg tcatggccgc ggtgcttatc tggcgcccat
      661 gggggctatt tggcaagccc atgacagcgt cggtatacgc agagccagag gcggcctggc
      721 gactgcccac gagtgcgcaa ggcgggctga catgggtggt tttattggtg gcgtttgcgc
      781 tgccctggtg gagcacgtct ttcccttacg cggtgtttgt tgccactgac atggtcattg
      841 cggttttgtt tgccgcaagc ttgcatctac tggtgggtcc cggtggcatg cattcgtttg
      901 ggcacgcggc ttactacggt cttggcgcct atggggcggc gctattagtc acaagcgcgg
      961 ggttacctat gccgctggcg ctggtgctag cccccttggc cgcaaccttg ggtgcattgt
     1021 tgtttggctg gttcagcgtt cgcctgtcag gtgtgtattt agcgatgttg accttggcgt
     1081 ttgcgcaaat tgtctggtct gtggcgttcc agtgggatgc ggtcaccggc ggcagcaacg
     1141 ggattattgg gctgtggcca cctgactggt tggctgatcc gaaccggttc tactggttag
     1201 cgcttgtttg tatggcgttg ggtatttggt tgttaaggcg cgtgttgttc tcgccatttg
     1261 gttatgcgat gcgcgctgca cgcgattcga acttgcgcgc acaggccatt ggcattgatg
     1321 tgcaccgcgt gcagtggatg gggtttgtgg tcaccggcgg cgtggctggg ttggctggcg
     1381 ctttgtttgc attctctaaa ggcagtattg cgcctgatgt gctgggtgtg gcgcagtcga
     1441 ttaacggctt ggtgatggtg atgttgggtg gcgtgcaaac gctggccggt cccgtggtgg
     1501 gtgcgtcggt atttgtttgg ttgtccgata ccgtctcgca acattcggat tattggcgag
     1561 ccgctttggg tgcgattatt ttgctgctgg tgttgctgtt tccgcgtgga ctggccggct
     1621 atggtcaatg ggtgtttggc caatggaagt ttggccaggg gcagcgaggg acgacgtcat
     1681 gagtctgctt gatgtgcgca acctcgcaaa agccttcggt ggtgtgcaag ccgtgcaggg
     1741 tgttgatctg acggtcaacg ccggcgagat ggtggcattg attggcccga atggggcggg
     1801 caagtccacg acctttaata tgatcaacgg gcagatcgcg cccgatgccg gggagattgc
     1861 gttactaggg cagtcgctca tcaaacgccc accgcgcact atctggcgct taggcgtggg
     1921 gcgcacgttt cagaccgcct ccgttttcag ttccatgacc gtcctagaaa acgtccagat
     1981 ggtgatgctc tcgcatgatc gtcgtctggc aaatctcttt gcgcgtgctg gggattaccg
     2041 gcaagacgac gccatggcgg tgttggcgca ggttggtttg ggtgagcagg ctgagcgcag
     2101 ctgcgtgtcg cttgcctacg ccgatttaaa gcgggttgag ctggccatgg cgattgccaa
     2161 tgagcccaag ctgctactga tggatgagcc agccgccggc atggcgcccg gggagcgcca
     2221 gcgtctgatg gcactgaccc gtgatttggc gaaagacaag cacatgggtg tattgtttac
     2281 tgagcacagc atggatgtgg tgttcgggtt tgctgatcgc gtgctggtca tggcgcgcgg
     2341 tgcgttaatt gcgcaaggca caccgcaagc cgtgcaagct gacgctgagg tagcgcgcgc
     2401 ttattttggg aagggggtca tgcgatgacg ggtcctggat cgaaccccat tcttaccgtt
     2461 tcgcaattca atgcctggta tggaccagcg caagcgttgt ttgacgttga tctgacatta
     2521 aatcaaggtg aagtcgttgc catcatgggg cgcaatggtg ccggtaagag cacactcctt
     2581 aaaaccctca tggggctagt gcccaagtcc cgcggtcagg caagtctgtt tgggcaatca
     2641 atcctaggat tgccgacgca tcgacttgcc cgcatggggc ttgggtttgt gccacaagag
     2701 cgacgcatct tcacaggcct gacggtgcga gagaacttgc agatgggtaa gcagggcgcc
     2761 caccactggc ccgatggccg ggtagggccg tgctgggatc aagcgagcct attcgaacac
     2821 ctgccgaatt tagctgagct gcttgaccgc atgggtaatc agatcagtgg cggtgaacag
     2881 cagatgctta gcctggctcg cacactgatg ggcaatccac tggttctatt gctcgatgaa
     2941 ccctcagaag gtgtggcgcc catcattgtg gagcgcatgc tcgagatggt gattgcactt
     3001 aaagagcagg gggtcagcat tgttctgtca gaacagaatc tggctttcgc tcaagcggtc
     3061 agtgaccggg tttatatgct cgaacagggt aaggttgtat ttgccgacac gatggcggcc
     3121 ttgttggcag actcatctgt cagtgaacgt tatctggggg tggcgggcgg cggcgggtag
     3181 caatagttag ccgtgcgaac ctggtttgca cagtagccaa ccccaaactg tatacaattt
     3241 aggatgtatc tactgcttta ggaacgtgat gcacgtctca ctcgaacagt ttaatgaggc
     3301 tagccttgat gatgccaggc agtggttaga gggcatctat gcgccgatag acacgtcggc
     3361 atccgcagct tggatcacag atcaagccat tgagcaacgt ccctttaaaa ctgtggctgc
     3421 cttgtgccaa accatgttac aggtcgtcag gcgcgccagc cagccgcaat acatggcgtt
     3481 gatcgcagcg cagcccgatg tggtggcagc atgccaaacg ttgtttgctg accaaagcag
     3541 cgcacaggac ttacaggcct tacagacgct ttctgaagac tatcggtcgc ggttcggttt
     3601 tgggtttgtg cttgatttag ccggtccacg tggggtcggt ttgatgctgg ctgatgtaac
     3661 tgctgcgctc gagcgtcgtt tgaggaaccc cgtggatgtt gaggtgcgag aggcgttgcg
     3721 tgaaattcac cgcgcagcac aaggcagggt gaacgcttta ttcaataccc aacccgtttt
     3781 gggtaaccag ttgtgggact ggtgtgaggc gctggccgtg cacagcgaac cttcttacgc
     3841 cgagcgtggc gagttgacag tgacgtatct gactcaggcg caccaggctt gtgcggcaca
     3901 catagcccag ttaatgcgcg aagtctgtgg gtttgatgag gtgcacatcg atgcggttgg
     3961 caatgtggtg ggggtctatc acgggcaaga caagaacgcc aagcgattgt taacgggtag
     4021 tcactacgac acggtgcgca atggcggtaa atatgacggg cgattgggga tttttgtgcc
     4081 aatgctatgc gtaagagagc tggcgcaaca gtcaagacgt ttgccgtttg gtattgaggt
     4141 ggtggcgttt gccgaagaag agggtcaacg ttacaaagcc gtgtttctgg gctccggtgc
     4201 gttaaccggt gagttcgata cgaggtggct tgatcaggtc gatagcgatg gcatttcgat
     4261 gcgccaggcc atgcaagacg ctggacgtaa tatcgacgac atcgcgacac tgaagcgcga
     4321 tgccaatcag tatctcgggt ttgttgaagt gcacatcgag cagggaccgg tcttaaccga
     4381 gctggactta cccctgggtg tggtgacttc gattaacggc agtgcacggt tcatgggtga
     4441 aatccgcggt ttggccagtc atgctggcac cacaccgatg ggtatgcggc gcgatgcggc
     4501 tgtggcggca gcggagttag cgctctatgt agaaacgcgt gctaccactg tccctgatct
     4561 ggttgcaacc atgggcatgc tggaagtgcc aaatggttca gttaacgtca tacccggtcg
     4621 gtgccgtttc agtctggatg ttcgggcaac gaccaatgag gtgcgtgatg cttgcgtggc
     4681 tgacatcagg ggcgaactgc aacagatttg ccagcgtcgc ggtgtccagt ttgagcttga
     4741 agagtttatg cgggcgtctg cagcgccatc gtcgccggcg tggcagtcac gttgggaagc
     4801 gtcagtcaag gcattgggct tgcccgtgca ccacatgccc agtggcgccg ggcatgacgc
     4861 gatgaaactg cacaacatca tgccgcaggc gatgttgttc gttcgcgggc tcaatggcgg
     4921 cattagccac aacccacttg agatgacgac caatgatgac gcacaactgt gcgtcgaggc
     4981 gtttgctcag ttgttggatc agttggcaaa agaataagac actgcttgat tcggtattga
     5041 ggaacgctgc gcaaatcctg agttacatcg ctgccggcta ggcgggttgt tttcagatac
     5101 gaggaactat cgggcaaaag ttctgtttca ggtaataatt cccatatatt gagaattacg
     5161 ggatcgcttg atgcctcgaa ctttgcctcg tcctatagtc aatccggacc cgcaggtcac
     5221 tgacatgaag gcccttggcc gcctagtgcg tgaccgccgc ggccagattg caatgcgtat
     5281 tgatgatgcc gcggcgctga tgggcgtttc taaaagcatg ctctctcgcc tagaaaacgg
     5341 ccaatctgtg agcctcgata aggtgttcaa agtgctcgag ggtctaggac tgaccaccac
     5401 ggcaagcccc gccgttcagg gcggggacaa acggtcattc aggtcggttc tgttcttgaa
     5461 tgtagcgctt gagtacttca atcggagcct cgcctgtgct gctagcgaag tagctagggc
     5521 tccatagcga gttttttgat ttggccatgg
//
LOCUS       DATBNL010000402         1702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_34729, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000402 DATBNL010000000
VERSION     DATBNL010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34729"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VIC30_06985"
     CDS             complement(<1..603)
                     /locus_tag="VIC30_06985"
                     /inference="COORDINATES: protein motif:HMM:NF009159.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4040 domain-containing protein"
                     /protein_id="HEY7804163.1"
                     /translation="MMLETVLGLFTLTMVAVVAIATIMASNLFVASMWFGIFSLLMAS
                     NFFILDAADVALTEAAVGAGVSTVLFMGALALTAEKETVVQRLSWLPIMALVALSLVL
                     FVATFEQPLLGDPNAPVHQHVAPWYIEKTPELINIPNMVTAILASFRGYDTLGEVIVI
                     LTAGIGVLSVLSFKPKNQREITGAQLSKKIRGVQHHAILRV"
     gene            complement(600..914)
                     /gene="mnhG"
                     /locus_tag="VIC30_06990"
     CDS             complement(600..914)
                     /gene="mnhG"
                     /locus_tag="VIC30_06990"
                     /inference="COORDINATES: protein motif:HMM:TIGR01300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H(+) antiporter subunit G"
                     /protein_id="HEY7804164.1"
                     /translation="MIIVDIVAWVFLGLGSFFVLVGGVGMIRMPDLYTRMHAASVTET
                     LGTMLILTGLMLLSGWSLATFKIFAILLFLLFTAPVSSYALANTALMGGTKPKLDQEQ
                     SS"
     gene            complement(911..1207)
                     /locus_tag="VIC30_06995"
     CDS             complement(911..1207)
                     /locus_tag="VIC30_06995"
                     /inference="COORDINATES: protein motif:HMM:NF015993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015075 - monoatomic ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter complex subunit
                     F"
                     /protein_id="HEY7804165.1"
                     /translation="MMLVVAGIAIVVTMSLAILRGLLGPGVYDRVLAMNMFGTKTVLL
                     VAVVAMIMGRPDFLDLALAYALINFIGVLAVLQFVQNREARQAPAPQDNQKEAP"
     gene            complement(1204..>1702)
                     /locus_tag="VIC30_07000"
     CDS             complement(1204..>1702)
                     /locus_tag="VIC30_07000"
                     /inference="COORDINATES: protein motif:HMM:NF014012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HEY7804166.1"
                     /translation="RGGLRMHIVVLFITLAVLWLLWSGLYLPLMLALGLASVILVVWL
                     TRRLETIDHESVPTHLGLKVIAYWGWLVKEIVVSSLQVTRIILARDMPISPTMVQTRA
                     KSKGVVGRVLFGNSITLTPGTLTTDIDDDGLVTVHALTKEGADGVVSGDMNDRVAALP
                     GFEES"
BASE COUNT          444 a          483 c          445 g          330 t
ORIGIN      
        1 cacccgcagg atcgcgtggt gttgaacgcc acggattttt ttgctcagtt gtgcgccggt
       61 gatctcacgc tggttcttgg gtttaaagct aagcactgac agaacaccaa tgcccgcagt
      121 caggatcacg atcacttcgc ccagcgtgtc ataaccacga aacgacgcca gaatggccgt
      181 caccatgttg gggatgttga tgagttcagg ggttttttct atgtaccagg gtgcgacgtg
      241 ttggtgcacg ggtgcattgg ggtcgcccaa gagcggctgc tcaaaggtcg ccacaaacag
      301 cacgagtgac agtgcaacca aggccatgat cggcagccaa ctcaggcgtt gcacaacggt
      361 ttctttctcg gcggttaacg ccaaggcgcc cataaagagc acagtcgaca ccccagcacc
      421 caccgctgct tcggttagcg ccacatcggc agcatcgaga ataaaaaagt tcgatgccat
      481 gagcagactg aaaatcccga accacatgct ggctacaaac agattgcttg ccatgatggt
      541 ggcaatggcc accaccgcca ccatggtcag cgtgaacaac cccaggacgg tttcaagcat
      601 catgacgact gctcctgatc aagcttgggt ttagtgccac ccatgagcgc tgtgttagcc
      661 agggcataag aggaaactgg ggcggtgaac aacaaaaaca acaaaatcgc gaagatctta
      721 aaagtcgcca atgaccagcc cgacaacagc atgaggccag tcaaaatcag catggtgcca
      781 agtgtctcag tgacgcttgc ggcatgcatg cgtgtgtaaa ggtctggcat gcgtatcatg
      841 ccaacaccgc cgaccaatac aaagaagcta ccaagtccta ggaacaccca ggccacgatg
      901 tcaacgatga tcatggcgcc tccttctggt tgtcctgtgg tgcgggcgcc tggcgtgcct
      961 cgcggttttg tacaaactgc aaaactgcta agacgccaat aaagttaatc aaggcgtaag
     1021 ccagtgccaa atccagaaaa tccggtcgcc ccatgatcat ggccaccacg gctacgagta
     1081 atacggtttt tgtgccaaac atgttcatgg ccagcacccg gtcgtacaca ccaggtccga
     1141 gcagccctcg aagaattgcc aatgacatgg tcactacgat cgcaatacca gcaacgacaa
     1201 gcatcatgac tcctcaaaac ccggtagcgc cgccacacgg tcgttcatgt caccgctaac
     1261 aacaccatct gcaccttcct tggtcagcgc gtgcacagtg accagaccgt cgtcatcaat
     1321 gtcggtggtc aaggtgccag gcgtcagggt aatggagttg ccgaacaaca cccggcccac
     1381 cacgccttta cttttagcgc gtgtttgcac catggtgggg ctaatgggca tgtcgcgcgc
     1441 taagataatg cgtgttacct gcaggctaga gaccacgatt tctttaacca gccatcccca
     1501 ataagcaatg accttcagtc caaggtgcgt gggcacggat tcgtgatcga tggtttcaag
     1561 gcgtcgggtg agccacacca cgaggatgac cgaggccaag ccgagcgcga gcatcaacgg
     1621 caaatacaga cctgaccaca agagccagag tacggcgagc gtgatgaaca gaacaactat
     1681 gtgcatacgt aagccacctc gt
//
LOCUS       DATBNL010000403         8050 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_94564, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000403 DATBNL010000000
VERSION     DATBNL010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 8050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8050
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94564"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(917..1429)
                     /locus_tag="VIC30_07005"
     CDS             complement(917..1429)
                     /locus_tag="VIC30_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804167.1"
                     /translation="MAITERLQAARQTTNLRAKSYAVTDIDVVGASGMAAIKTTVGSL
                     ASRPDLTHNDMALLARKIGTKMLRRSKSSRWHYAHNDLSLIAAHALVYWHDPRCRDCG
                     GHGLRVEQQLTVGPCEACNGSGKRALPTDVKTIKRRPPDCLEAALRFALSLIDNEIGL
                     HLMNTRQRLG"
     gene            complement(1768..3084)
                     /locus_tag="VIC30_07010"
     CDS             complement(1768..3084)
                     /locus_tag="VIC30_07010"
                     /inference="COORDINATES: protein motif:HMM:TIGR01554.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEY7804168.1"
                     /translation="MQEPRPVPRPDDRDVMKLRAELSKVGVDAFNCTNVQDSIKEVRR
                     GVNKLEDRAAKLYVDGQAQEANELASVVDVAGQCIARWQYEADMKEFEAAWNRGEIDP
                     INGTTLGKGSDVSLIQANESFSKGVSRAQPARAHGIGDLLAGMVGVNQSQDIRAALSE
                     GIDSAGGLSVPSYLLDQVIDAMRARMVTMRAGAQTVRLDTDKTNMLRITSDPKASWHG
                     ENELITESQPSFDAVTFEPKTLVTMVKLSRELLEDSLNINTAIELAIAGALGEAMDKA
                     MLFGSGQNNEPLGLANHTGLATVDVGGPITSYAKPLEGVLKLYQNNVWEDTRLHMLTN
                     PLAWSQMQGLTSSEGQPLMPPSSVAAVPQLVSTAIPSDTIIMGDFNKLLVGIRSQMRI
                     ELLRETFADRYQVAFLASMRVDCGVMHESCFVKLENISAPSTATKK"
     gene            complement(3151..3852)
                     /locus_tag="VIC30_07015"
     CDS             complement(3151..3852)
                     /locus_tag="VIC30_07015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804169.1"
                     /translation="MKRKAKDDGVDQVRKRSSTAPRDSREPGCPEWCYQTLNLLSMSW
                     QSVEIDVERITEHYLELCATKAWLKIPVHAPYGTEQEMIKQELGIEEGDFYDALRKKV
                     TEQQIEARQVEILAIDNEAGIPIRESAEKLGLSKSKAHRMLSQKSSVHTKNGTKPKRE
                     LKQYKISQYTKPATAAQKIRETFGDDYALELASLLYGQSTGYNHSIGCDVDPSGGVND
                     DQDSAMPSARARIRD"
     gene            complement(3852..4157)
                     /locus_tag="VIC30_07020"
     CDS             complement(3852..4157)
                     /locus_tag="VIC30_07020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804170.1"
                     /translation="MTSIQKKENTLEPSGVHVVQAVLGCEHFDAGQWLQVNYDHKRID
                     RDGLYLINDGGSTTVRRIEDSVIHGWRVRIGEHLVPLHQCVNFRVLGLVNLVHGEGV"
     gene            complement(4472..5653)
                     /locus_tag="VIC30_07025"
     CDS             complement(4472..5653)
                     /locus_tag="VIC30_07025"
                     /inference="COORDINATES: protein motif:HMM:NF024872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804171.1"
                     /translation="MKPQQIIDRLVADAVVYGGPDEFVDLTPISKDELESSPISKRAI
                     IPGYLYADVRQRIAPGGVGKTTLALFEMMVAGMGSKLWRYSVPHQVKSVLVTREDSRA
                     ILVGRMREIARHNGFTDIEVQRVLNNVLIIDVTGQDLRLTHIDGDVPRPHMDNITRLV
                     EAVRPFKPDWMVFDPAISFGVGEARVNDAEQALVEAARVMVNRLDCCIEYIHHSGKAN
                     AREATLDQYSGRGGSALADGSRMVSVLQSVTEADWVAKTGKPLDEGESGMIMAMPKMS
                     YTSPQADVLVLRRGFKFDFIEPAPAKTPEQVVKDDADKVYAFIESEWEKGGRHSKNAI
                     EQSTQIVGLTRVRIRSALDHLIAYRRVRLSDSKKFSKTTHLVPMLAKGHGEVPVNEGV
                     N"
     gene            complement(5650..5799)
                     /locus_tag="VIC30_07030"
     CDS             complement(5650..5799)
                     /locus_tag="VIC30_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804172.1"
                     /translation="MAIPEARFMVVGAVPAADALASRWSDAGLRVHVIVPPSGDVNDL
                     LREAA"
     gene            5798..6082
                     /locus_tag="VIC30_07035"
     CDS             5798..6082
                     /locus_tag="VIC30_07035"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804173.1"
                     /translation="MTKVMAGEFAPDNVLVNALCVGQIMSEQWVGYYKKDNPDMTFEE
                     YVAMRGKSLPMGRIGEAQEFANVACFLASDAASYVTGVAINVDGGLSPVV"
     gene            complement(6182..7111)
                     /locus_tag="VIC30_07040"
     CDS             complement(6182..7111)
                     /locus_tag="VIC30_07040"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY7804174.1"
                     /translation="MPTAIADPVRESNSSSDTLSDTLSFTPLHSTFMARASDIDLRTV
                     TDEPTLAAIRAGMAQYGVLVFRGQQFTGQEQVAFAQRLDGELHRKTSSAVIAKNRYGD
                     EALTDISNVDGDGSILTAEDRRRINGISNRIWHTDASFESPAGRYSMLYARTIPPVRA
                     DTEFADMRTAYEKLDDETKTLIDGLHAHHSIVYSRHIMGFDFSPEEAARLPGAVHPLV
                     RRFKESPRPSLYLASHANRIMEWRVPEGRLLLKDLMEHAIQREFVHFHEWTKGDLVIW
                     DNRMTMHRARPYDDVKYKRELTRVTTLDIERVH"
     gene            complement(7352..7801)
                     /locus_tag="VIC30_07045"
                     /pseudo
     CDS             complement(7352..7801)
                     /locus_tag="VIC30_07045"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
     gene            complement(7913..8029)
                     /locus_tag="VIC30_07050"
     CDS             complement(7913..8029)
                     /locus_tag="VIC30_07050"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7804175.1"
                     /translation="MKRVAERLGYAHVNHFIAAFKRKYGYTPGQLRRGGLGN"
BASE COUNT         1903 a         2217 c         1966 g         1964 t
ORIGIN      
        1 ttttctggtg ggtcgggtgg gactcgaacc cacgaccaac ggattaaaag acctatgaac
       61 ggattgccga ataaacacct aaattattga ttttcaacga tttaatccta cttttatcca
      121 cccgtaaagt ggtcaaaata cccctgaaaa tagccctttt agcaccagtt tgggatagat
      181 ttggcaccac ccatgaactg gttatatata cagtggtttt gtgctccgga attccggagc
      241 gcaaagttct tggtcagttc gccggatttc cgacaaaccg agtgattgca acacgcgcca
      301 agtttttgct ttatgaatca aagcgttgct ggcgcacctg cccattgggc aagtgccgta
      361 gaccgcagtc atccatatac cgccacgaaa ctcaaggatg gtgggtgcgc caatgtcttg
      421 acgcttgttt tcatttctgg tgaattcacc agaaatgcca agtgactgcg ccttgaacat
      481 gtaccgaaca gccgcccgta aaggtaagca tgtcaatagt caaggcaggg gactaaaaga
      541 atggcgagat agggaatggc agaagtagct ttgacattgt caaagctact caaggcggca
      601 acgaatccac ctaccttctc aaacgcctaa agcgttaggt gaggttggta gacctgaagg
      661 taaaaagaat ggcgatggac cgggaagggg gaataaaaga gctgacaatg taagctcttt
      721 tattaagcac ggcaatgaac atacttacct tctcaaacgc ctgaagcgca agacgctttg
      781 ttctattttt ggtatctaaa ttagattttt tgcacacgct ttaggtgacc atggcgtaaa
      841 tcagcataac ggaggaggtg acaatgtaac ctccactatt aagcgcggca ccaagacagg
      901 caattgtcca ggtcttttaa ccaagcctct gtctggtatt catcaggtga agacctatct
      961 cgttatcaat caacgacaac gcaaagcgca acgccgcctc taggcaatct ggtggccttc
     1021 ttttaattgt cttcacgtca gtgggcaatg cacgcttgcc tgacccgtta cacgcctcac
     1081 acggccccac agtcaattgt tgctcgacac gcaagccatg gccgccgcaa tcacggcatc
     1141 gtgggtcatg ccaatacacc agtgcgtgcg cggcaatcag cgacaggtca ttgtgagcgt
     1201 aatgccacct tgaggactta gaccttctca acatcttggt gcctatctta cgggcaagca
     1261 atgccatgtc gttgtgcgtc aggtcaggcc gtgaggccag actgccaacg gtggttttaa
     1321 tggccgccat gccagaggca cccacaacgt caatgtccgt gaccgcgtag gactttgccc
     1381 gtaaattggt tgtttgacgg gccgcttgaa gtctttcagt gattgccatg gtttaactcg
     1441 ctttattggg ggtacccctg tttttcaggg aattgcccgc acaaaaaaat tcctgtccaa
     1501 agggtgccga aaatttaatc aattgaagtt ttgacatggg ggtgtctttg acccctgtat
     1561 ccaattttgg atgcgaacac aaagcgtttg cgcgtcggta ctggaaaaca agcggcctga
     1621 acaatcaagg ccgcccctta aaggtggcac cgtgcacatg gaactttgaa aacatgcagc
     1681 gtaggtgcct tcacagtgac cgtctctcgt catcactgcc cgcttgagtg ccgtcctagc
     1741 gaatccataa ccaggacggc ggccaaatta cttcttagtc gcggtagacg gtgccgagat
     1801 gttctcaagc ttcacaaagc aagattcatg catcacgcca caatcaacac gcatgctggc
     1861 caagaacgcg acttgataac ggtccgcaaa agtttcgcgc aacagttcaa tccgcatctg
     1921 tgaccgaatg ccaaccagca atttgttgaa gtcacccatg atgatggtgt cacttggaat
     1981 ggccgtagac accaactgag gcaccgccgc aaccgatgat ggcggcataa gtggctggcc
     2041 ctctgaactg gtcaggccct gcatctgtga ccatgccagc gggttggtca acatgtgcaa
     2101 gcgtgtgtct tcccaaacat tgttttggta aagcttcaga acaccctcga gtggctttgc
     2161 gtagctggta atcggtccac caacgtcaac cgtggccaaa cccgtgtgat tggccaaacc
     2221 gagtggctca ttgttttgac cactaccaaa caacatggcc ttgtccatgg cttcacccaa
     2281 agcaccagca atggccagtt caatggccgt gttgatattc aggctgtcct caagcaattc
     2341 acgggaaagc ttaaccatcg tcaccaaagt tttaggctca aaagtcaccg cgtcaaaact
     2401 gggttgtgat tcggtgatta actcgttttc gccatgccac gatgctttcg ggtcagatgt
     2461 gattcgcaac atgttggtct tgtcagtatc aagcctgacg gtttgagcac cagcacgcat
     2521 cgtgaccatt cgagcacgca tggcgtcaat gacttgatca agcaagtacg atggcacgct
     2581 taggccgccc gctgaatcaa tgccctcact tagcgcggct ctaatgtctt ggctttggtt
     2641 aacaccaacc atgcccgcca acaagtcacc gataccgtga gcacgtgcgg gttgtgctcg
     2701 tgacacgccc ttgctgaatg attcattggc ttgaatcaat gacacgtcag aacctttgcc
     2761 aagtgtggtg ccgttaatag ggtcaatctc tccgcgattc caggcggctt cgaattcctt
     2821 catgtcggcc tcatattgcc aacgtgcaat gcactgtcca gcaacgtcaa cgacacttgc
     2881 cagttcattg gcctcttgtg cttgaccatc cacgtaaagc tttgcggctc ggtcctctag
     2941 cttgttaacg ccacgccgaa cttctttgat ggagtcctga acgtttgtac agttaaatgc
     3001 gtcaacgccg actttagata gttcagcgcg tagtttcatc acgtcacggt catctggacg
     3061 cggtacaggt ctaggttctt gcattttcaa aatcctttat cacatggcct tgggcacaaa
     3121 aaaagcgcac accagggccg attaaaaaaa tcagtctctg atacgcgctc tcgccgaagg
     3181 catggccgaa tcttgatcat cgttaacgcc gcccgagggg tcaacgtcac aaccgatact
     3241 gtgattataa ccagtgcttt gcccgtaaag caatgaggct agttcaagcg cgtagtcatc
     3301 gccgaatgtt tcacgaatct tttgcgcggc cgtggcgggt ttggtgtatt ggcttatctt
     3361 gtattgcttc aattcacgct ttggctttgt cccatttttg gtgtgtacac tcgatttttg
     3421 ggacaacata cggtgagcct tgcttttaga tagaccaagt ttttcggctg actcacgaat
     3481 cgggatacca gcctcattgt caattgccaa tatttctacc tgcctggctt ctatctgttg
     3541 ttcggttacc ttttttctca gtgcatcata aaaatcacct tcctcaatac ccaactcttg
     3601 cttgatcatt tcctgctcgg tgccatacgg tgcgtgaact ggaatcttca gccacgcttt
     3661 ggtggcgcat aactcaaggt agtgttccgt aatacgttca acgtcaattt ctaccgactg
     3721 ccaactcatt gaaagtaggt tcagcgtctg gtagcaccac tcgggacaac cgggttcccg
     3781 gctgtccctt ggagccgtgc tagaccgttt tcttacttgg tcaacgccat cgtcttttgc
     3841 tttgcgtttc atcacacgcc ttccccatga accagattga ccaggccgag caccctgaag
     3901 ttcacgcact ggtgtaacgg caccaagtgc tcgccaatgc gaacgcgcca tccgtgtatc
     3961 acgctgtcct cgatgcgccg caccgtggtg ctaccgccat cgttgatcag atacaggcca
     4021 tcacggtcaa tgcgcttgtg gtcatagttc acctgcaacc actggccagc gtcaaagtgc
     4081 tcgcacccca aaaccgcctg gacaacatga acgcctgaag gctcgagcgt gttttctttt
     4141 ttctgaattg aagtcatgac atttccttgt ttttttcaat ctataaattt tttaaataaa
     4201 catttcaatt gtgggcgtat gaaaagcgtt tgcccaacgg tcttgtaaaa aaaaccgttt
     4261 tgaacaatcg gacgtacccc tctaatcgaa caaaatgccc gtaaaagtga tggttgcaat
     4321 cccatcctcg ccatcctcgc cgatgctcgc cgtcctcttt tggcgaagtc gtaggaaaca
     4381 agggaaaaat tgggcggcta tcctcgccgc caattttttc cctataggcg gcggcgagga
     4441 taaacaaggg ttgagatttg gcgaacatca ttcaattgac cccttcattt acgggaacct
     4501 cgccatggcc tttggcgagc ataggcacta ggtgggtcgt ctttgaaaac ttcttgctgt
     4561 cgctcaagcg cactcgcctg taagcgataa gatggtcaag cgcggaccga atgcgaacac
     4621 gggttaagcc aacaatctgt gttgattgtt cgattgcgtt tttgctgtgg cggccaccct
     4681 tttcccactc ggactcgatg aacgcataaa ccttgtcggc atcatctttc accacttgct
     4741 ctggtgtctt ggctggtgca ggttcgatga agtcaaactt aaaccctcgc cgcaacacca
     4801 gcacatcagc ttgcggtgac gtgtacgaca ttttgggcat ggccataatc atgccgcttt
     4861 cgccctcgtc caatggcttg cccgtcttgg ccacccaatc ggcctcagtt accgactgaa
     4921 gcaccgacac catgcgacta ccatctgcca gtgctgaacc gccacgtcct gaatactggt
     4981 caagcgtggc ctcacgtgca ttagccttgc cgctgtggtg tatgtactca atacaacaat
     5041 caagccgatt gaccattacc ctggccgcct caaccagtgc ttgctctgca tcgtttacac
     5101 gcgcctcgcc gacaccaaaa ctgatagcag ggtcaaacac catccaatcc ggtttgaacg
     5161 gcctgacagc ctccacaagc cgcgtgatgt tgtccatgtg tggacgtggc acgtcaccgt
     5221 caatgtgcgt caagcgcaag tcctgacccg tcacatcaat gatcagcacg ttgttgagca
     5281 cccgttgcac ctcgatgtcg gtgaacccgt tgtgccgcgc aatctcacgc attcgcccaa
     5341 ccagaatggc ccgtgaatcc tcgcgtgtca caagcaccga tttaacttgg tgcggcaccg
     5401 aataccgcca caacttggac cccatgccag ccaccatcat ttcaaacaat gccagcgtgg
     5461 tttttcccac gccgcctggt gcgattcttt ggcgaacatc agcgtatagg tagcctggaa
     5521 tgattgcccg ctttgatatg ggcgagcttt ccaattcatc cttgctaatc ggggtcaggt
     5581 caacgaattc atcaggtcca ccgtaaacca cggcatcggc caccaaacgg tcaataattt
     5641 gctgtggctt catgccgcct cccgtaacag gtcatttaca tcacccgatg gcgggacaat
     5701 cacgtgcacc cgaaggccag catctgacca ccgactcgcc aatgcatcgg ccgccggcac
     5761 cgcgcccacg accatgaacc gggcctctgg tattgccatg accaaggtca tggcgggcga
     5821 atttgcgccc gacaatgtgt tggtcaacgc cctatgcgtc ggtcaaatca tgtccgaaca
     5881 atgggtcggt tactacaaga aagacaatcc cgacatgaca tttgaagagt atgtggcgat
     5941 gcgcggcaag tcattgccca tggggcgcat cggtgaagcc caggaattcg ctaacgtggc
     6001 atgctttctc gcctcagacg ccgcctcgta tgtcacgggc gtggccatca acgtcgatgg
     6061 tggtttgagc ccggtggttt aagcttggtg ctggagtccg gcatacgcct atccaaagcg
     6121 cttgatggcc ggactcttgg caccgcatgg cacagttcgg cacagttcgg cacctgctgc
     6181 attaatgcac gcgctcgata tcgagtgtgg tcacacgagt gagctcgcgc ttgtacttga
     6241 cgtcgtcata gggcctggca cggtgcatgg tcatgcggtt gtcccaaatc accaggtcac
     6301 ccttcgtcca ctcatgaaag tgcacaaact cgcgttggat ggcgtgctcc atcaggtctt
     6361 tgagcagcaa ccggccttcg ggcacccgcc actccatgat gcggttggcg tgcgaggcca
     6421 gataaagcga ggggcgaggc gattccttga accgacgcac cagtgggtga accgcgcccg
     6481 gcagtcgcgc ggcctcttca ggcgaaaaat caaaccccat gatgtgtcgt gaatagacaa
     6541 tggagtggtg cgcatgcagg ccatcgatta aggtttttgt ctcgtcatcg agcttctcat
     6601 atgccgttcg catatccgcg aactccgtat cggcgcgcac cggcgggatc gtgcgtgcat
     6661 aaagcatgga gtatcgtccg gccggcgact caaacgaggc gtcggtatgc cagatccgat
     6721 tactgatgcc gttgatgcga cgccgatcct cggcagtcaa aatgctccca tctccatcaa
     6781 cgttggaaat gtccgttagc gcctcgtcgc catagcgatt ttttgcgatg acggctgacg
     6841 aggttttacg gtgcagctcg ccatccaagc gctgcgcaaa tgccacctgt tcttgcccgg
     6901 tgaactgctg tcccctaaaa accagcaccc catattgcgc catcccagcc cgtatggcgg
     6961 ccaacgttgg ctcatcggtc actgtgcgca agtcaatgtc actggctcgg gccatgaagg
     7021 tggaatgcaa tggcgtaaac gaaagcgtgt ccgaaagggt gtccgaactc gagtttgact
     7081 cacgcacggg atctgcgatg gctgttggca tttgtcttcc tttgtatttt ttgttgtaac
     7141 tctagtgcgc aagggatttt tattcaaaca aaccccatga ataatgccgg ctgacacctc
     7201 gtcaccgcct cctcttgcag cgcacgctca agcaccgatt ttgttttaca gcatcagttg
     7261 acccatagca actgatctgt cgcaactgat cagtgcaatc agagccaata gcaagtgcaa
     7321 gcacatcaac tgacaacggg ttcatcgcaa attaggcacc ctgacgcagc ttggtcatga
     7381 ccatagggaa attgttatag gcgtagcgct taacgatgcg accatcgacg agcgtgtcta
     7441 tatggatgcc accgatgtcg acatcgagtc ccgttggcgc aatgccctga aagacaccat
     7501 tgtgcttgcc cgtaatgcac tactgaaccg caaaccggtc cccctcatcg agcgtggtct
     7561 ggatttcgct gtggcacccg ggaaaaccct ccagaattga tttcaccgcg gcgatcatgg
     7621 catcaacccc atgcatggga tcaaacccgg tcgcaagatt gacgaactca ggcgccataa
     7681 tctcgcgcat cacttcaagt tgaccatcgt taatgcactc taggtgataa cgaatcgatg
     7741 ggtgtgatgt gttcatggcc tgtttccttg caggatgatt tagaaataaa tttatcaaca
     7801 tcccagatgg agaaacacta agttttttga cttaaacttc aatatcaggc gagaaactac
     7861 catgcgattg gcatgacccc agtcgagacc acaaacgaac cgctacgcca ggctaattgc
     7921 ccaaaccacc tcgacgcaac tgaccgggtg tgtagccgta cttgcgctta aaggcagcaa
     7981 tgaagtgatt gacgtgggca tagcccagac gctcggccac tcgcttcatc ggctaatcag
     8041 aagccaccaa
//
LOCUS       DATBNL010000404         3288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_144544, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000404 DATBNL010000000
VERSION     DATBNL010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3288
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144544"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1031
                     /locus_tag="VIC30_07055"
     CDS             <1..1031
                     /locus_tag="VIC30_07055"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HEY7804176.1"
                     /translation="TATQQTREDMIERLRLKQAQTFASGFDRPNVFYEVVDKADVRAQ
                     LLTFIQTRHAGQSGIVYTASRARAQALAMWLTRHRVKALPYHAGMDRQERAANQDRFK
                     REDGVVMVATIAFGMGIDKPDVRFVAHVDMPRSLEHYYQETGRAGRDGLPATAWMAYG
                     MADVAQRYALSREAQTSASQTQRLAHAFDRMLQFAESLTCRRVQLLAHFGQDSQACGH
                     CDVCQTKVHGPGFWDATQAAQMMLSTVYRLWRERGQRFGSGHLIDIVRGRRTPRVLSQ
                     SHDTLSVFGVGAHWSVLTWRVVLRRLMAEQMLVTDDEGYGTLVMTPASVPVFKGEQQI
                     WLRVEPDG"
     gene            complement(1108..2184)
                     /gene="ruvB"
                     /locus_tag="VIC30_07060"
     CDS             complement(1108..2184)
                     /gene="ruvB"
                     /locus_tag="VIC30_07060"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEY7804177.1"
                     /translation="MAIQSDQFTGATPDTRIVDATSQTPNEESIERALRPKALQDYVG
                     QETVREQLQIFIEAARGRQEALDHVLLFGPPGLGKTTLAHIVAYEMGVNLRQTSGPVL
                     ERAGDLAALLTNLEKNDVLFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVK
                     LDLQPFTLVGATTRAGMLTNPLRDRFGIVSRLDFYTHDELASIVTRNAGLLQTTIEDQ
                     GAAEIARRSRGTPRIANRLLRRVRDFAQVRANGIITQEIASQALGMLEVDPQGLDLMD
                     RKLLEAIVHKFDGGPVGVESLAAAIGEERDTIEDVIEPYLIQNGFLQRTPRGRVATQT
                     TWRHLGLTPPNTPPNTPPGAGELF"
     gene            2275..>3288
                     /locus_tag="VIC30_07065"
     CDS             2275..>3288
                     /locus_tag="VIC30_07065"
                     /EC_number="4.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010091641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threo-3-hydroxy-L-aspartate ammonia-lyase"
                     /protein_id="HEY7804178.1"
                     /translation="MALAPQTTVVSPTYAGVERAARTLAGVAHCTPVVTSNSLNRALG
                     AEIFFKCEPMQRTGAFKFRGAFNALSNLSDAQRAAGVVAYSSGNHAQAIAASGQILGV
                     PTTIVMPHDAPQAKRAATEGYGAQIVSYDRYTEKRDEIAADLAHKHGYTIIPPFNHPD
                     VICGQGTAGKELLEQTGGLDALVVCVGGGGLISGCALAASVLSPDCRVYGVEPAAGDD
                     VRQSLATGQIVQIEPPKSIADGALTAAPGDITFAVMRELVTDVVTVSDTQLVLTMRWF
                     AQRLKLIVEPTGCLAAAAVLQRVLPIEPGARIGVIVSGGNVDLASYGAFLSDPQYDGD
                     WVVT"
BASE COUNT          656 a          853 c         1037 g          742 t
ORIGIN      
        1 taacagccac acagcaaacg cgcgaggata tgatcgagcg gctgcgtttg aaacaggcac
       61 aaacctttgc cagtggcttt gatcggccga acgtgtttta tgaggtggtc gacaaggccg
      121 atgttcgggc gcaattgttg acgtttatcc agacccggca tgcggggcaa agtggcattg
      181 tgtataccgc ctctcgcgca cgagcccagg cgcttgcgat gtggcttacg cgccaccgtg
      241 tcaaggcttt gccgtatcac gccggcatgg atcgccaaga gcgcgcagcc aatcaagacc
      301 gcttcaagcg cgaggatggg gtggtaatgg tagcgacgat tgcctttggc atgggcatcg
      361 ataagcctga tgtgcgattt gtcgcgcatg tggacatgcc ccgttcgctt gagcactact
      421 accaagaaac gggtcgagcc ggtcgagacg ggttgccagc cacggcctgg atggcctacg
      481 gcatggccga tgtggcccag cgttatgcgc tctcgcgtga agcacaaacc agtgccagtc
      541 agacacagcg tctggcacac gcctttgatc gcatgttgca gtttgctgaa tcgttgactt
      601 gtcgccgtgt gcagttgctg gcgcattttg ggcaagacag ccaagcatgc ggtcactgtg
      661 atgtctgcca aaccaaggtg catggacccg gattctggga tgccacacaa gcagcacaga
      721 tgatgttgtc gaccgtctat cgcttgtggc gtgagcgcgg tcagcgattc ggttcaggtc
      781 atctaatcga tatcgtgcgg ggcaggcgca cacccagagt gcttagccaa tcacacgaca
      841 cattaagcgt gtttggcgtt ggtgcgcatt ggtctgtgtt gacctggcgc gtggtgttgc
      901 gacgcctgat ggccgaacag atgctggtca ccgacgacga ggggtacggt acgttggtca
      961 tgacaccggc gagcgtgccg gtgtttaagg gcgaacaaca aatctggttg cgtgttgagc
     1021 ctgatggttg aaactgaggg ttgaaactga aggttgaacc cactgacagc gtttgctaac
     1081 tgagatgtac tcgcgctgtt aaaagcgcta gaacaattcg cctgcgccag gtggggtatt
     1141 cggtggagtg ttcggtgggg tcagccccaa gtggcgccac gtggtttgcg tggccacccg
     1201 tccgcgcggg gtgcgctgca agaacccgtt ttgaattaag tatggttcga ttacgtcttc
     1261 aatggtgtcg cgttcttcgc cgatggccgc ggccaagctt tccacgccca ccggacctcc
     1321 gtcaaacttg tgaacaatcg cttcaagcag tttgcgatcc attaagtcta ggccttgcgg
     1381 atcaacctca agcatgccca gtgcttgcga ggcgatttcc tgggtgatga tgccgttggc
     1441 gcgcacttgc gcgaagtcac gcacccgtct gagcaagcga ttggcaatgc gaggggtgcc
     1501 gcgtgagcgc cgggcgattt ctgctgcgcc ttgatcttcg atcgtggtct gtaatagccc
     1561 ggcgttgcgt gtgacgatgc tggccagctc atcgtgggtg tagaagtcta ggcgcgagac
     1621 gatgccaaac cggtcgcgca gcggattggt tagcatgccc gcgcgcgtgg tggcacccac
     1681 gagggtgaag ggctgtaaat cgagtttgac actgcgcgcc gctggccctt cgccaatcag
     1741 aatgtcaatt tggaagtctt caagggcggg gtaaagaatc tcttcgacca caggcgataa
     1801 gcgatggatt tcatcgataa agagcacatc gtttttttct aggttggtca agagcgccgc
     1861 gaggtcaccg gcgcgctcga gcaccggccc agatgtctgg cgcaaattca cgcccatttc
     1921 ataggccacg atgtgcgcga gtgtggtttt acccagacct ggggggccaa acagcagcac
     1981 gtggtcaaga gcctcttggc ggccacgtgc tgcctcgata aagatttgta gctgctcgcg
     2041 cacggtctct tgcccgacat agtcttgcaa ggctttgggt ctaagcgcgc gctcaatgga
     2101 ttcctcattg ggcgtttgac tggtggcatc gacaatgcgg gtgtcggggg tcgcgccggt
     2161 aaactgatcg gactgtatgg ccatgagaag gtttgtgtgt ctgtgtgcga tgaaggctgg
     2221 attcaatcgt acactaacag agggttgaaa taaggaagac gtgaggaaga cgcaatggcg
     2281 cttgcaccac agacaacggt tgtatcaccg acttacgctg gcgttgagcg cgccgcgcgc
     2341 acgctcgctg gggtcgcgca ttgcaccccg gtggtgacga gtaactcgct aaaccgcgcc
     2401 ttgggtgcag agatattctt taagtgtgag cccatgcagc gcaccggtgc gttcaagttc
     2461 cgaggcgctt ttaatgcatt atccaatctc agtgacgcac agcgagccgc cggggtggtg
     2521 gcgtattcgt ctggcaacca cgcccaagcc attgccgcct ccggtcaaat cctcggggtg
     2581 cccacgacca ttgtcatgcc acatgatgcg ccacaagcca aacgcgcggc taccgagggt
     2641 tacggtgccc agatcgtgag ctacgaccgc tatacagaaa agcgtgatga gatcgctgcg
     2701 gatttggcgc acaagcatgg ctacacaatt attccgccct ttaaccaccc ggatgtgatt
     2761 tgcgggcagg gcacagcagg taaagaattg cttgagcaaa ccggtgggct tgatgcgctg
     2821 gtggtgtgtg tgggtggtgg cggactgatt tctggttgtg ccttggctgc ctcggtgctt
     2881 agccccgatt gtcgtgtcta cggggtagaa cctgccgccg gtgatgacgt gcgtcaatct
     2941 ttggcgacag ggcaaattgt gcaaatcgag ccacccaagt ctattgccga tggggcgcta
     3001 acggccgcac ccggtgacat cacctttgcg gtgatgcgtg agttggttac cgatgttgta
     3061 acggtttccg atactcagct ggtgctaacc atgcgctggt tcgcacagcg gttaaagtta
     3121 atcgtcgaac ccacgggttg tctggcagcg gctgccgtgt tgcaacgggt attgccgatt
     3181 gagccgggcg cacgtatcgg ggtgattgtc agcggcggta atgtagatct ggcaagctat
     3241 ggggcgtttt tatcggaccc gcaatatgat ggtgattggg tcgtcacc
//
LOCUS       DATBNL010000405         2379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154440, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000405 DATBNL010000000
VERSION     DATBNL010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154440"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VIC30_07070"
     CDS             <1..712
                     /locus_tag="VIC30_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804179.1"
                     /translation="TVSRLIGAPPGYVGYDQGGLLTEAINKQPHCVLLLDEIEKAHSD
                     VFNILLQVMDHGTLTDNNGRKADFRNVIVIMTTNAGAEAMSKPSIGFSNTREAGDEMG
                     EIKRLFSPEFRNRLDAIVHFAPLSKDIILRVVDKFLMQLEDQLHEKRVDAAFSEKLRD
                     YLAERGFDPLMGARPMQRLIQDMLRRALADELLFGRLVSGGTVTLDLDDNDQVVLHVE
                     DSGGSPKKKESPKELVHE"
     gene            complement(843..1295)
                     /gene="dut"
                     /locus_tag="VIC30_07075"
     CDS             complement(843..1295)
                     /gene="dut"
                     /locus_tag="VIC30_07075"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011830155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEY7804180.1"
                     /translation="MKTVDLKILDDRLKDHLPSYATTGSAGLDLRACLDVPTDIEPGQ
                     TILVPTGLSIHIADPGYAAMILPRSGMGHKHGIVLGNLVGLIDSDYQGPLMVSTWNRG
                     KSVFRLEPMERLAQLIIVPVVQAQFRVVDDFESESGRGAGGFGSTGSK"
     gene            complement(1292..1975)
                     /locus_tag="VIC30_07080"
     CDS             complement(1292..1975)
                     /locus_tag="VIC30_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEY7804181.1"
                     /translation="MQAYIDQISLFIEANQAWAGLIVFLLTMGESMLIVGIMIPATAL
                     LLFTGGLLGAGTLPATPILLWGIAGAIVGDAISFWLGRWIGPTILRWRIVKRHRSTVA
                     RARLFFYRYGFLSIFFGRFLGPIRSTIPTVAGVMGMSHWRFQVANALSAALWVPMMLL
                     PGFLAAKSVQAAEHANNLTLYIGGGLSVVVGVWLLYMFTKSRGSANDRQQKRAERKHP
                     KRTSQENSS"
     gene            complement(2060..>2379)
                     /locus_tag="VIC30_07085"
     CDS             complement(2060..>2379)
                     /locus_tag="VIC30_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HEY7804182.1"
                     /translation="HTPPELVFEMNPDILHDVARLKEAPWCVGFAAETTLDENALMDK
                     RRRKGAALLIANLAQDVMDRDHTTVHLVDDQGVSLLGTGEKTTIARLLIERIAQHYGA
                     HQT"
BASE COUNT          579 a          596 c          666 g          538 t
ORIGIN      
        1 cacggtgtca cgcttgattg gtgcgccgcc gggctacgtt ggctacgatc agggtgggtt
       61 gctcactgaa gccatcaata agcagccaca ttgcgtgttg ttgctcgacg agattgaaaa
      121 agcgcactcg gatgtgttca atatcctgtt gcaggtgatg gaccatggca ctctgacgga
      181 caacaacggt cgtaaggcgg acttccgtaa cgtgatcgtg atcatgacga ccaacgcggg
      241 tgcagaagcg atgagtaagc ccagcattgg cttttctaac acgcgtgaag cgggcgatga
      301 aatgggcgaa atcaagcgct tgttctcacc tgaattccga aaccgactcg atgcgattgt
      361 acatttcgca cctttatcta aggacatcat cttacgagtg gtcgacaagt tcctgatgca
      421 gctagaggat cagttgcacg agaagcgggt tgatgctgca ttctcggaga aattgcgtga
      481 ctacttggct gaacgtggct ttgatccctt aatgggtgcg cgtcccatgc agcgtctgat
      541 tcaggacatg ctgcgccgtg cactagccga tgaattgttg ttcggcaggc tcgtgagcgg
      601 cggaaccgtg acgttggacc ttgatgacaa cgatcaggtc gtgttgcacg ttgaagacag
      661 tggtggctca cccaagaaaa aagagtcgcc caaagagttg gtgcatgagt aggctttaat
      721 aacactcatc taaccaagca acgaacaaga agggctccag acatgtgggg cccttcttgt
      781 ttggctttcg gaattatgcc gtatacctaa tcagttgtgg ctcgttaaat aacctagact
      841 cttcactttg aacccgtgct cccaaatcca ccggcaccac ggccgctttc ggactcaaag
      901 tcatcaacga cgcggaattg cgcttgaaca actggcacga taatcaattg cgccaagcgt
      961 tccatgggtt ccaagcgaaa tactgacttg ccgcggttcc aggtcgaaac catcaacggg
     1021 ccttgataat cggagtcgat aagccccacc agattgccca gtacgattcc gtgcttgtga
     1081 cccatgccag agcggggcaa aatcatcgcg gcgtaacctg ggtctgcgat gtgtatggat
     1141 aagcctgtag gcaccaaaat ggtctggccg ggttcaatgt ctgtgggtac atcgaggcaa
     1201 gccctcaggt cgagccctgc tgagccagtc gtggcgtagc ttggcaagtg atctttcaag
     1261 cggtcatcaa gtattttaag gtcgacggtt ttcacgagga gttctcttgg gatgtgcgct
     1321 taggatgttt acgttcagca cgtttttgtt gacggtcgtt ggctgagcca cgacttttag
     1381 taaacatata aagtaaccag acaccgacga caacggacag gccgccgcca atatagagcg
     1441 tcaagttgtt ggcgtgttcg gccgcctgaa cgcttttggc ggccaggaaa ccgggtaaca
     1501 gcatcatagg tacccacagc gcagcagata aagcgttggc cacctgaaag cgccaatgcg
     1561 acatgcccat gacaccggcc acggttggaa tggtgctacg aatcgggccg agaaatcgac
     1621 caaaaaagat tgacaaaaag ccgtatctgt aaaagaacag gcgggcccgt gccactgtgc
     1681 ttcgatgccg tttgacgata cgccagcgca aaatggtggg gccaatccag cgtcccaacc
     1741 aaaaagagat cgcatctcca acgatggcgc cggcaatacc ccacaacaaa atcggtgttg
     1801 ctggcaaggt gcccgcacca agcaagccac cggtaaatag caacagggca gtggccggga
     1861 tcatgatgcc gacgatcagc atggactcgc ccatggtcag caagaagaca ataagtccag
     1921 cccaggcttg attggcttca ataaaaaggc tgatttggtc aatgtaggct tgcatacggt
     1981 tgtttagtgt cgcattcggc gggtttacta cggcggtgag ggcactggtt tgttgtcggg
     2041 acgcggcaaa gtgtagccgt taagtttgat gggcgccgta atgctgcgcg attcgctcaa
     2101 tgagtagacg tgcgattgtg gttttttcgc cagtgcccag tagcgacacg ccttggtcat
     2161 caaccaagtg tacggtggtg tgatcacggt ccatgacatc ttgcgccaaa ttcgcaatca
     2221 ggagtgcagc ccccttgcga cggcgtttgt ccatcaaagc gttctcgtcg agcgtggttt
     2281 cagcagcaaa tccaacacac caaggtgcct cttttaggcg agccacgtcg tgcaagatgt
     2341 ctgggttcat ctcaaaaacc aattccggtg gtgtgtgga
//
LOCUS       DATBNL010000406         3624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_64811, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000406 DATBNL010000000
VERSION     DATBNL010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64811"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /locus_tag="VIC30_07090"
     CDS             <1..728
                     /locus_tag="VIC30_07090"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEY7804183.1"
                     /translation="QQRHTIYPDPVQAALLAEAAGADLITLHLREDRRHIQDADVYAL
                     RPKLLTRMNLECAVTEEMLDIAVDVQPHDVCLVPEKRTELTTEGGLDVVTGFDRVAAA
                     IERLHNVDVRVSLFIDPQTDQIEASHRAGARIIELHTGAYAEAKTAAAAHAEIDRLKQ
                     AIAQAVGLGMRVNAGHGLHYGNVAPIAALPGIAELNIGHAIVAQSIFDGWQTAVRDMK
                     AVMVQARLAGLRGETVPLPEAVA"
     gene            761..1783
                     /gene="nagZ"
                     /locus_tag="VIC30_07095"
     CDS             761..1783
                     /gene="nagZ"
                     /locus_tag="VIC30_07095"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEY7804184.1"
                     /translation="MLDVVGPELTDEDRKRLMHPLVGGVILFARHFKDRSQLRKLTRQ
                     IHKAKKPKLLIAVDHEGGRVQRFRDDGFTHLPAMARLGEVWMKDPMRAMSLATACGMV
                     MAAELRACGVDMSFAPVLDLDYGVSKVIGDRSFHRDARVVTMLARALAQGMAMVGMSA
                     CGKHFPGHGAVSEDSHHDIPVDNRTLTRILKEDAAPYLWLGDLVMPAVMPAHVIYPKV
                     DNKPAGFSEKWIGEVLRSQLHYDGVGFSDDLTMEGASVAGDITARAEAALQAGCDMVL
                     VCNRPDLSDELLRQLRYKAPGKSTERIARLMPKTKARDWSSLKRWPAYQQALAWVKSL
                     DEHVAD"
     gene            1764..>3624
                     /gene="uvrC"
                     /locus_tag="VIC30_07100"
     CDS             1764..>3624
                     /gene="uvrC"
                     /locus_tag="VIC30_07100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003264454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEY7804185.1"
                     /translation="MSTSPTEPGSADEPAETPATTPATTPARDIKSLLAGLPHLPGVY
                     RHVDAQGEVLYVGKARDLKKRVSSYFQKTGHSPRIAHMVARVVKVEVTVTPSEAEALL
                     LENNLIKQLKPRYNILFRDDKSYPYLMVSNHDAPRINYYRGSTQRPGQFFGPYPNAWA
                     VRETIQILQKVFRLRTCEDTVYANRTRPCLLYQINRCSGPCVGRISPEDYQRDVKRAT
                     QILKGETQVVLQDIESRMQSASEALEFELAAQLRDQMAALSRVLQQQTMEQTDGQDTD
                     VIASAMAGGRACVNLAMIRNGRHLGDRAFFPAHVNEDEAGDILEVFMAQHYVEHALPP
                     VIVATDPPKDESILALLNDTAQGKTRLLVRPQGVRRSWLEQARQNAELALTRALTEGG
                     QRQARTLALAEALGLETDEQFLDELRVECFDISHTAGEATQASCVVFHHHDVQPSLYR
                     RYNIDGITPGDDYAAMRQVLTRRYAKVADGQTATPGLVLIDGGKGQVEVARQVFEEYG
                     LDLGWLVGVAKGENRKTGLETLVFADGRPPLVLGVASAALMLIAQIRDEAHRFAITGM
                     RAKRAKARQGSRLQDIEGVGAKRRQKLLNRFGGLGGVSAASVEQLASVDGISLE"
BASE COUNT          758 a          947 c         1115 g          804 t
ORIGIN      
        1 gtcagcaacg ccacacgata taccccgacc cagtgcaggc tgcattgcta gctgaagcgg
       61 ccggcgctga cttgattact ttgcatctgc gtgaggaccg acgccacatc caggatgccg
      121 atgtttatgc cttgcgcccg aagttgctta cgcgcatgaa cctggaatgc gcggtaacgg
      181 aagaaatgct cgacatcgca gtcgatgtgc agccccacga tgtttgcctg gtcccagaaa
      241 agcgcaccga gctgacgacc gaaggtggac ttgatgtggt gacgggtttt gatcgggtgg
      301 ccgctgccat cgagcgcttg cacaatgtgg acgtgcgtgt gtcgcttttt atcgatcctc
      361 aaactgatca aatcgaggcc tcgcatcgcg ccggtgcccg aatcattgag ctgcatacgg
      421 gtgcctatgc tgaagccaag acggctgcgg cggcgcatgc ggaaatcgat cgccttaagc
      481 aagccatcgc acaagcggtt ggtctgggca tgcgagtcaa tgctgggcat ggcttgcact
      541 atggcaatgt ggcgccgatt gcggctttgc ctggtattgc agagttaaat attggtcatg
      601 ccatcgtggc gcagtccatt tttgatggat ggcagactgc ggtgcgtgat atgaaagcag
      661 tcatggtgca ggcgcgcctc gcgggcctgc gtggggagac cgtaccacta ccggaggccg
      721 tggcgtgaaa tcaccatcaa aataccggcg cgggccagtg atgctcgacg tcgtcgggcc
      781 cgaattgacg gatgaagatc gcaagcgttt gatgcaccca ctggttggtg gtgtgatcct
      841 gtttgcgcga catttcaagg atcgtagcca gctacgcaag ttaacgcgtc agattcacaa
      901 agcaaagaag cccaagttgt tgattgctgt tgatcacgaa ggtggtcgtg tacagcggtt
      961 tcgcgatgat ggttttaccc atttacctgc catggcgcgc ttgggtgagg tctggatgaa
     1021 agaccccatg cgcgcgatgt cgttggccac agcttgtggg atggtgatgg ccgctgagct
     1081 tcgtgcctgc ggggtagaca tgagctttgc accggtattg gaccttgatt acggcgtgag
     1141 taaggtcatc ggtgaccgct cgtttcatcg cgatgcgcgt gtggtgacca tgttggcgcg
     1201 tgcgttggct cagggcatgg caatggttgg gatgtcggct tgcggtaaac actttccagg
     1261 gcatggggca gtcagcgagg attcgcatca cgatatcccc gtagataacc gcacgctgac
     1321 acgtatcttg aaagaagacg ccgcacccta tctgtggctc ggcgatctgg tcatgccagc
     1381 tgtcatgcct gcgcatgtca tttatcctaa agtcgacaac aagccggctg gcttctcaga
     1441 gaagtggatt ggcgaggtgt tacgcagcca actgcattac gacggtgtgg ggttttctga
     1501 tgacttgacc atggaaggtg cgagcgtggc gggtgacatc accgcacgcg ccgaggccgc
     1561 gttgcaagcg ggttgtgaca tggtgctggt ttgtaaccgt ccagacttgt cagacgaatt
     1621 gctcaggcag ttgcgttaca aggcgccagg taagtccacc gagcgcatcg cccgtttgat
     1681 gcccaagacc aaggcgcgcg actggtcgtc attgaaacgc tggcccgctt atcagcaggc
     1741 attggcatgg gtaaagtctc tcgatgagca cgtcgccgac tgagcccggc tcggccgatg
     1801 agccggcaga aacaccggca accacaccgg caaccacacc ggcacgcgac atcaagtcat
     1861 tgctcgcggg cttgccgcat ctgccaggtg tgtatcggca tgtggatgcc cagggcgagg
     1921 tgctgtatgt tggcaaagcc cgtgacttaa agaaacgtgt cagttcgtac ttccaaaaaa
     1981 ctggccacag cccgcgtatt gcccacatgg tggcgcgggt ggtcaaggtt gaagtcacgg
     2041 taacaccgtc tgaggccgaa gcactattgc ttgagaacaa tctcatcaag caattaaagc
     2101 cacgctacaa catcctgttt cgtgacgaca agtcgtatcc ctacctgatg gtatcgaacc
     2161 acgatgcgcc tcgtattaac tactaccgcg gttcgacaca acgacccgga cagttctttg
     2221 ggccatatcc caatgcttgg gcggtgcgcg agacgatcca gattctgcaa aaagtatttc
     2281 gcttgcgtac ctgtgaggac acggtttacg ccaaccgcac gcggccctgt ctgctttacc
     2341 aaatcaaccg ctgttcagga ccttgtgtgg gtcgtatcag tccagaggat tatcagcgcg
     2401 atgtcaaacg tgccacccag attctaaagg gtgaaacgca ggtagtgctt caagatattg
     2461 agtctcgcat gcagtcagcg tctgaggcgt tggagtttga gcttgctgcg cagctgcgtg
     2521 accagatggc agccttatct agggtgctac agcaacaaac catggagcaa accgatggcc
     2581 aggacaccga tgttattgct agcgccatgg ctggcggacg tgcttgcgtg aatttggcca
     2641 tgattcgcaa tggccgacat cttggggacc gggcgttttt cccggcgcat gtcaatgaag
     2701 atgaggccgg tgacattctt gaggtgttca tggcgcagca ctatgtggag catgccttgc
     2761 cgccggtgat tgtggcgacg gatcccccta aagacgagtc gatcctggcc ttgcttaacg
     2821 ataccgccca aggcaaaacg cggttgctcg tgcggcctca aggcgtacgc aggtcctggt
     2881 tggagcaagc ccgacaaaac gcagagttgg cattaaccag ggcattaacc gagggtggac
     2941 aacgtcaggc tcgcacgctt gctttggccg aggccttggg gcttgagacc gatgagcagt
     3001 tcttggatga gctgcgtgtc gagtgttttg atattagtca caccgcaggt gaagccaccc
     3061 aggcttcctg tgtggtgttt caccaccacg acgtacagcc ttcgctgtat cgacgctaca
     3121 acattgatgg tattacgccg ggcgacgact acgcggccat gcgtcaagtg ctgacccgac
     3181 gttatgccaa ggtcgctgat gggcaaaccg ccacgccggg gctggtattg attgatggcg
     3241 gcaaagggca ggtcgaggtg gcgcgccaag tgtttgaaga atatggactt gatcttggtt
     3301 ggttggttgg tgtggccaaa ggcgagaatc gtaagaccgg tcttgagacc ttggtatttg
     3361 ccgatggtcg gccaccactc gtgctcggcg tggcgtctgc ggcgctgatg ctgattgcgc
     3421 aaatccgcga cgaggcacat cggtttgcca ttactggcat gcgtgccaag cgcgccaaag
     3481 cccgtcaggg gtcgcgtctt caagacattg aaggcgtggg cgccaaacgc cggcagaagt
     3541 tgcttaaccg tttcggtggc ctcggcggcg tcagtgcggc gagtgtagaa cagcttgctt
     3601 cggtcgacgg gatctccctt gaaa
//
LOCUS       DATBNL010000407         4273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_164836, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000407 DATBNL010000000
VERSION     DATBNL010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4273
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164836"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VIC30_07105"
     CDS             <1..280
                     /locus_tag="VIC30_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804186.1"
                     /translation="QYYSQATIVYLDQTGKESARSFFKEIILPEGSIYKMDFVQTKDG
                     KPADGKHTHDGAIIGGTGKYAGIRGTYSLEISASGKDATTVLKYWIGQ"
     gene            425..703
                     /locus_tag="VIC30_07110"
     CDS             425..703
                     /locus_tag="VIC30_07110"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEY7804187.1"
                     /translation="MRYSSQIKPISYVKANAAEVIGQLERDRQPVFITQNGEAKAVLQ
                     DIASFEQTQETLALLKILALGNQQVANDQVKPFDEVIKRLKSKQKSML"
     gene            700..1059
                     /locus_tag="VIC30_07115"
     CDS             700..1059
                     /locus_tag="VIC30_07115"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7804188.1"
                     /translation="MTKKTVKFDIFITNDAEADLEDIYDFLIEQTGQKFAVDMLDKLS
                     HAIKTLSTFPNRGSCPRELLDLGIIEFRQLIFERYRVIYRVMGNSVSIHLIADGRQDM
                     HTLLTQRVLRLHRDRIQ"
     gene            complement(1484..3271)
                     /locus_tag="VIC30_07120"
     CDS             complement(1484..3271)
                     /locus_tag="VIC30_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY7804189.1"
                     /translation="MNATEKANEWLSAFDAALRNRDVDSAVDLYGTDCYWRDLVSFTW
                     NIKTSEGPEQIRQMLQARLQDVQPTNWTLEGEATESDGIVDAWFTFETGASRGRGHLR
                     LKDGKAWTLLTTMVELKGFEEQKGVARPKGVEHGPHRGRQTWKESREQELKTLGYTEQ
                     PFVVIVGGGQAGIILGARLRKLGVPAIIVEKNPRPGDSWRNRYKSLCLHDPVWYDHLP
                     YMPFPDDWPVFAPKDKLGDWLEMYTKVMELNYWGSTTCKKAVFNEKRQEWEVTVDREG
                     REVTLRPKELVIALGVSGYPNTPDIPGADTFEGDQFHSSKFPGAENYRGKKAIVLGSN
                     NSAHDICAALWEEEVDTTMIQRSSTHIAPSDSLMELALGGLYSEQALANGIDHHKADL
                     IFASVPYKIMHTFHIPVYEEMKKRDADLYSRLEKAGFLLDFGVDGSGLFMKYLRRGSG
                     YYIDVGASELVANGSVKLKSGVTIETIKPKSVVLSDGTELDADLIVYATGYGSMNKWL
                     ADLISEDVANRLGKVWGLGSDTPKDPGPWEGELRNMWKPTNVPHLWVQGGNLHQNRHY
                     SQFLGLQLKARYEGVPTPVYELATAHHAS"
     gene            complement(3461..>4273)
                     /locus_tag="VIC30_07125"
     CDS             complement(3461..>4273)
                     /locus_tag="VIC30_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011800039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY7804190.1"
                     /translation="CAAIPEALIESELFGYLPGSFSGATSKGKRGLIQEADGGTLFLD
                     EIGDMPLALQGRLLRVLAEREVQPLGATKPAKINLRVLTATNCDLIAAVKAGRFRDDL
                     YYRLNGAHFCLPPLRERHDLPYLIKALCDASTPSLDLHPSVLEVLLSHPWPGNLRELC
                     NVLEYARSLAVNGSIVPEDLPDYIAGAEARPRAYRVADLGMGVIHTMVAPDTRAPGKH
                     QAVDKHQLESVLKKTGWNVSAAARELHVSRMTLYRWMKRHSVQSPNQMSGSM"
BASE COUNT         1052 a         1164 c         1043 g         1014 t
ORIGIN      
        1 tcagtactat tcacaagcca ctattgtcta tcttgatcaa accggcaaag aaagcgctcg
       61 ctcattcttt aaagaaatca tcttgcccga aggctccata tacaagatgg attttgtgca
      121 aaccaaagac ggcaagcccg ccgatggcaa acacacccat gacggcgcca tcatcggtgg
      181 cacaggcaag tacgctggta tccgaggtac ctattcgctg gagatatcag cgtcaggcaa
      241 ggatgccacc accgtgttga aatactggat tgggcagtag gacagggcct ctcgctcggc
      301 agctaatacg ctcggccggt ggatgtcgct gcaatgggtc aaacaagagc acatcgcgta
      361 gacgcactgc ttgaatcggg accaaataaa gactatattt agttttatgc atctaggggg
      421 tcatatgcga tattcaagtc aaatcaaacc gattagctac gtcaaggcaa acgccgccga
      481 ggtcattggc caactcgaac gtgatcggca acccgtgttc atcactcaaa acggcgaagc
      541 taaagcagtg ctacaagaca tcgccagttt tgagcaaaca caagaaacac ttgccctgct
      601 caaaatactt gcactaggta accagcaagt agccaatgac caagtcaagc catttgatga
      661 agtgatcaaa cgcctcaaaa gtaaacaaaa atcaatgcta tgaccaaaaa aaccgttaag
      721 tttgacatct tcattacaaa cgatgcggaa gctgatcttg aggatatcta cgactttcta
      781 atagaacaga ctggccaaaa gtttgccgtt gatatgctcg ataaattaag tcacgccatc
      841 aaaacactgt ccacctttcc gaaccgagga agttgtccga gggagttgtt agatctgggc
      901 atcatcgaat ttagacaact tatcttcgaa cgatatcggg tcatctaccg cgtcatgggt
      961 aattcggttt cgatacatct aattgccgat ggtaggcaag acatgcacac actactgact
     1021 caaagagtgt tgcgactgca tcgcgatcgt atccaatagc agatcacttt gatccgtatc
     1081 acacttggat cgcgcctcaa tcggtcaatg ccaacgagca ggaaccactg cacataagtc
     1141 tcgccgattg atgtttacat caaccggcga aatagttgtt gagtgcaagc agagtttttg
     1201 gcatggctac ttaaccaaac ccctaggcac gacagggaag tccgggttgg caacatctac
     1261 acaggttttt gaacagttgt taacccaggg tttggctttc taccagttgc gcacgactga
     1321 tgcgtgtgac agggcatgtg gccacactgc tactgttgtt agcgtcagga cgctgccgcg
     1381 actgtgttga cgtactggat tgggcagtag gacagctcct ctcgctcggc atctaatagg
     1441 ctctacctag aggtcgcaag caagcgaccc ctagccggtt aagttagctc gcgtgatggg
     1501 ccgttgccaa ttcgtatacc ggtgtcggaa ccccctcgta gcgggcctta agttgcagtc
     1561 caagaaattg agagtagtgg cggttttgat ggagattgcc gccttgcacc cataaatgcg
     1621 gaacattcgt gggtttccac atgttgcgca actccccctc ccatggaccc ggatctttag
     1681 gtgtgtctga tcccaatccc caaaccttac ccaaccgatt ggcgacatcc tcggaaatca
     1741 ggtctgccaa ccacttgttc atggatccat agccagtggc ataaacgatc aggtcggcgt
     1801 cgagttccgt accatcagac aacaccacgc tcttgggttt gatcgtttca atggtgacac
     1861 cactcttgag tttgacactg ccattggcca ccaactcgga ggcacccaca tcgatgtaat
     1921 acccggatcc acggcgcaga tatttcatga acagccctga cccatctacg ccaaagtcga
     1981 gcaagaaccc agccttttct agccttgaat acagatcagc atcccgcttt ttcatttcct
     2041 cgtacacagg tatgtggaaa gtgtgcatga ttttgtaagg cacactggca aatatcagat
     2101 ccgctttgtg gtgatcgatc ccgttggcca gcgcctgttc tgaatagagt ccgcccaagg
     2161 ctagttccat gagtgaatct gacggggcaa tatgggttga agaacgttga atcatggtgg
     2221 tatcaacttc ttcttcccac agggctgcac aaatgtcgtg ggccgagtta tttgacccca
     2281 agacgatggc ttttttgccg cgatagtttt ccgcacccgg gaatttactg gaatgaaact
     2341 gatcgccttc aaatgtatcg gcaccaggga tatccggtgt attcgggtaa ccagacacgc
     2401 ccagcgcaat caccagttcc ttgggccgta gcgtgacctc gcgaccttca cggtccacgg
     2461 tgacttccca ctcctggcgc ttttcattaa aaaccgcttt tttgcaggtc gtcgaccccc
     2521 agtaattcaa ctccatgact ttggtgtaca tctctagcca atcgccaagt ttgtccttag
     2581 gtgcaaatac cggccagtca tctgggaatg gcatgtaggg caagtggtca taccaaaccg
     2641 ggtcatgcag gcataagctt ttgtagcggt tacgccagga gtcaccgggg cgaggatttt
     2701 tttcaacgat gatggcaggc accccgagct tgcgcagtcg cgcccccaaa ataatccctg
     2761 cttgaccgcc accgacaatg accacaaacg gctgttccgt atagcctagg gtcttgagtt
     2821 cttgctctcg cgactctttc caggtctgac gcccgcggtg tggtccatgc tcgacgcctt
     2881 ttggtcgggc gacacctttc tgttcctcaa agccctttaa ctcaaccatg gtagtcaaaa
     2941 gtgtccaggc tttgccgtct tttagacgca agtgcccacg gccacgcgag gcacccgtct
     3001 caaaggtgaa ccaggcgtca acgataccgt cgctctccgt ggcctcacct tcaagcgtcc
     3061 agttggtggg ttgcacgtct tgaagtctgg cttgcaacat ctgtcttatc tgctcagggc
     3121 cttcggacgt cttgatgttc caagtaaaag acacgagatc acgccagtag cagtccgtgc
     3181 catacaaatc aactgccgaa tccacgtcgc ggtttcgcag cgccgcatca aacgcgctta
     3241 accactcgtt ggctttttcc gttgcattca ttgtttgcct cctgatttag ttagactctg
     3301 gtaagtccat tttttcgtgt acaacaacct agctgaagca aatgacatgc cagcgttcgt
     3361 ttcggcttct gtgcaccggc catgaccacc aaatgtcaca tcacactgtc acatgcgaca
     3421 agcgctcacg tgacacctgt cacaggacgt tggtctggtg tcacattgag cccgacattt
     3481 ggttaggtga ctgcactgaa tggcgtttca tccaccgata caaggtcatg cgagaaacat
     3541 gaagctctct ggcagcggcc gacacgttcc agcccgtttt ctttagcacc gactccaatt
     3601 ggtgcttgtc caccgcctga tgtttgcctg gcgcacgagt gtctggtgcg accatggtgt
     3661 ggatcactcc catgcctagg tcagccaccc gataggcacg cggtctagcc tcggcacctg
     3721 cgatgtaatc gggtaggtcc tcaggcacga tgctgccatt gacagcaagt gaacgggcat
     3781 attccaacac gttgcataac tctcgcaggt tgcccggcca cgggtgcgac aacaaaacct
     3841 caagtactga tgggtgcaga tcaagcgagg gggtgcttgc atcacacaac gctttgatga
     3901 ggtagggcag atcgtggcgt tcgcgtaaag gtggcaggca gaaatgcgca ccgttaaggc
     3961 ggtaatacag atcatcccgg aaacgccccg ctttaacagc ggcaatcaga tcgcaattgg
     4021 tggcggttaa tacccgcaaa ttgatcttgg cgggcttggt cgcacccaag ggctgcactt
     4081 ctcgttcggc tagcacccgc aacaaacgcc cttgcaacgc aaggggcatg tcaccgattt
     4141 cgtctaaaaa caaggtgccg ccgtcagctt cctgaatcag cccacgcttg cctttggagg
     4201 tcgcacctga aaaactgcct ggcaaatagc caaacaactc gctttcaata agtgcctctg
     4261 gaatggcggc aca
//
LOCUS       DATBNL010000408         3913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174002, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000408 DATBNL010000000
VERSION     DATBNL010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174002"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1324
                     /locus_tag="VIC30_07130"
     CDS             134..1324
                     /locus_tag="VIC30_07130"
                     /inference="COORDINATES: protein motif:HMM:TIGR01554.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEY7804191.1"
                     /translation="MADQISEIKALAEVQGTLLEKHKELKGWMEKANGEIEVARSASA
                     ETKAALEKLSDQSAELADKCLEIERRVAEGNESAQKAAEETAGEMLVKSDSFKSMTEG
                     RSKFARVEIKAAIVNATGQNQPLVPSDRLPGIINNPNRVLTIRDVLPVGRTTSNLIEF
                     TKENVFTNNAGPQYDSPATENVIKPESGITFTLASAPVVTLAHFIPVSRQVIDDAPQL
                     ESYVNSRLTYGLKLEEEDQLLNGNGTSGNISGILNSGNFTAYNRAVTGDTKLETLRRA
                     ITQGQLSEFMVDTIVMNPADWEEIELLKGTDGQFVFSNPVVMAGPQIWGKRVVPTNSI
                     ASGTFLVGAMAMGAQIWDRQDAAVQISYEDGDNFKKNMATLLAEERLALTVYRPAAFI
                     SGSF"
     gene            1395..1694
                     /locus_tag="VIC30_07135"
     CDS             1395..1694
                     /locus_tag="VIC30_07135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804192.1"
                     /translation="MELIDVIAKAHFENPNLGAVARKQRLRIGKPLAEYLVGLGLVDY
                     ANPPKAVVTESPKTEAADLGGDEPSMSSQPDQALQEETVSTSRRGRRRKTGEYSQ"
     gene            1973..2182
                     /locus_tag="VIC30_07140"
     CDS             1973..2182
                     /locus_tag="VIC30_07140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804193.1"
                     /translation="MKRKAGKTHFFGDHPYHRNHEGPTDPIMQRWCGNFKQLAQDLSH
                     EGVKVYNATRETALTAFEQRELELC"
     gene            2323..2847
                     /locus_tag="VIC30_07145"
     CDS             2323..2847
                     /locus_tag="VIC30_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804194.1"
                     /translation="MSRFLVPYLMGYKGTAVFADAADMICLADVAELEQQLKDVKNPV
                     GLVKHDYKTRHKIKYVGTDMQSPNVDYERKNWASLMLMDCENPAWKSVTPKSLNTWSM
                     IDLLKFKFLDNSEITEIPDCWNRLVDEGQSIEGAKILHWTAGIPGFKHYADAPGADLW
                     RKELERTCYPLHTP"
     gene            2823..3569
                     /locus_tag="VIC30_07150"
     CDS             2823..3569
                     /locus_tag="VIC30_07150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804195.1"
                     /translation="MLPTTYAIKSALTSPKFGKAFAKGCGGQLVYHDKLPAEGSIAMF
                     GHPDLVRMLYEAQDQGRDWYYGDKAYFGREAYYRATKNAYMHNAVGEPDYKRLSKIGI
                     KSQPWRNGSYILLCPQSPLFFAMQGKNRNEWIYSVTKELKKHTNRKVRVRETKKSPGT
                     ESAFRKSLDDVWAVVVHSSMAGTQAAMHGVPCFATDPDCTSAAFGSTDLSLIESPVKP
                     DNRDEMAAVLAANQWTLDEIASGMAWEHIK"
     gene            3566..>3913
                     /locus_tag="VIC30_07155"
     CDS             3566..>3913
                     /locus_tag="VIC30_07155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804196.1"
                     /translation="MKVWEGIYLPESETHLLDWMKAVKHYVDGKPTYQYSKYAECLKI
                     IKSHRLAIDVGGNLGLWSRVMCLDFDRVEAFEPVPEYAEYFRKNAPNANLNEVALSDS
                     EEIITMACATNGSC"
BASE COUNT         1036 a          925 c         1031 g          921 t
ORIGIN      
        1 caatggcaac ggtaagccgg agcaagcgtt tatttactcc gggtgagccg gaagtagagc
       61 ctgttgaatt accgaacgac ataaagcaaa tgattgcttt gaatctactt aaatccaaat
      121 cggagtaaat accatggctg accaaattag cgaaatcaaa gcccttgccg aagtgcaagg
      181 cactctgctt gaaaagcaca aagagttgaa ggggtggatg gaaaaggcta acggcgaaat
      241 cgaagtcgct cgtagcgcat ctgctgaaac caaagccgca cttgagaagt tgtccgacca
      301 gtccgctgag ttggctgaca agtgcttgga aattgagcgt cgtgttgccg aaggcaacga
      361 gtcggctcag aaagccgctg aagaaaccgc cggtgagatg cttgttaaga gcgacagctt
      421 taagtcaatg accgaaggtc gtagcaagtt tgctcgcgtt gagatcaagg ctgctattgt
      481 taacgccact ggtcagaatc agcctttggt tccttctgat cgtctgcctg gcatcatcaa
      541 caacccgaac cgtgttctta cgattcgtga cgttttgcct gttggtcgca caacttccaa
      601 cttgatcgag ttcacgaaag aaaacgtgtt cacgaacaac gccggtcctc agtacgactc
      661 acccgccacg gaaaacgtga ttaaacctga gtcaggtatt accttcacgt tggcttcagc
      721 acctgttgtg acgcttgctc acttcattcc cgtttcccgc caagtgattg acgacgcgcc
      781 tcaacttgag tcctacgtca acagccgctt gacctacggt ctgaagttgg aagaagaaga
      841 tcagttgctt aacggcaacg gtacttcagg caatatctct ggcatcttga acagcggcaa
      901 cttcacggct tataaccgtg ctgtgaccgg cgacaccaag ctagagactt tgcgtcgtgc
      961 aatcacccaa ggtcagttga gcgagttcat ggtggacacc atcgtgatga acccggctga
     1021 ttgggaagaa attgagttgc tcaagggtac agacggtcag tttgtgttca gcaacccagt
     1081 ggtgatggca ggtcctcaga tttggggcaa gcgcgttgtg cctaccaaca gcatcgcttc
     1141 tggtacgttc ttggtcggtg caatggcaat gggcgcacag atttgggacc gtcaggacgc
     1201 agccgtgcag atttcttatg aagatggcga caacttcaaa aagaacatgg ctacactgct
     1261 tgccgaggag cgtttggcac tgacggtgta ccgtcctgct gctttcatct caggctcgtt
     1321 ctaaattttg atgctgtaaa ctagggcttg gtggcttaat cgctatcaag ccctttttac
     1381 ttttggaaaa tgttatggaa ctgattgacg taattgccaa ggctcacttt gagaatccga
     1441 atctcggtgc tgttgcacga aagcagcgtc tacgcattgg caagcctttg gcagaatact
     1501 tagttggtct tggtttggtt gactacgcaa accctccgaa ggcggtagtc acagagtccc
     1561 ccaagacaga agcggcagac cttggtgggg acgaaccgtc tatgtcgtcg caaccggacc
     1621 aagccttaca agaggagact gtgagtacat cacgtcgcgg tcggcgcagg aaaaccggcg
     1681 aatactcgca ataaaggatg cgtggcgact gctaggtaat gcaaacgcat tgtatgcttg
     1741 tgaccttcat tggtgggaca gatatgctca cgaaattaag tcggacttta gtggcgaatt
     1801 gtggacgcag tgccgcatta gcgcacgaaa gtacggactc aaactatggc aagggcaatc
     1861 catgccgggg ctaggtcgag acaagttgca ctttggcaac aatagtggct atcaagctat
     1921 caatcttgca tacttgctcg gtgcagagtc gattatcttg ttaggatttg acatgaagcg
     1981 caaggcaggc aagacccatt tctttggcga tcatccctat caccggaacc acgaaggtcc
     2041 tactgaccca attatgcaac gctggtgcgg caactttaag cagttagcgc aggacttgtc
     2101 ccacgaaggc gttaaagtct acaacgccac cagagaaacg gctttgacag cgtttgaaca
     2161 acgagagtta gagttatgct gaccatattt tgcgggtttg atagccgaga agcgattgga
     2221 taccatgttt tttgtgcaag cgtccttcac cgagcaagta tccccgtttc gttctcccct
     2281 ttgcgaatca gaacgtcaga ccaaggtaca aaccagttta cggtgtctcg attccttgtc
     2341 ccgtatctga tgggatacaa aggcacagcg gtatttgctg atgctgctga catgatttgc
     2401 ttggctgacg tggctgaact tgagcaacag ctaaaggacg ttaagaaccc cgttgggcta
     2461 gtcaagcacg actacaaaac ccgccacaag ataaagtacg tcggcacaga catgcaaagc
     2521 ccaaacgtgg actacgaacg caagaactgg gcaagcctga tgttaatgga ctgcgaaaat
     2581 ccggcatgga agtcggttac gccaaagtcg ctaaacacat ggagcatgat tgacctgctg
     2641 aaattcaagt ttcttgataa cagcgaaatt actgaaatcc ctgattgctg gaacaggctt
     2701 gttgacgagg gtcaaagcat tgagggggcg aagatattgc attggacagc gggaataccc
     2761 ggattcaagc attacgccga cgcgccaggt gctgacttgt ggcgcaaaga actggaacgg
     2821 acgtgctacc cactacatac gccataaagt cggctctcac gtcgcctaag tttggcaaag
     2881 cgtttgccaa agggtgcggc ggtcagttgg tttaccacga caagctgcct gccgagggaa
     2941 gtatcgccat gttcgggcat cccgatcttg tgcgtatgct ttatgaggct caagaccaag
     3001 gcagagactg gtactacggt gacaaggcgt actttggacg tgaggcttac tatcgagcca
     3061 ccaagaacgc ttacatgcac aatgcggtag gcgagcctga ctataaaagg ctatccaaga
     3121 taggcatcaa atcacaaccg tggcgcaatg gctcgtatat cttgctttgc ccgcaaagtc
     3181 cgcttttctt tgctatgcag ggaaaaaatc gcaatgagtg gatttactct gtcaccaaag
     3241 agttgaaaaa gcacaccaac agaaaagtca gggtcaggga aaccaagaaa agccccggca
     3301 cagagagcgc gtttaggaag tcgcttgatg acgtatgggc agtggttgtg cattcgtcta
     3361 tggcaggcac acaagccgct atgcacggcg ttccttgctt tgctactgac cctgattgca
     3421 cgtctgctgc atttgggtca acagacctat ccttaattga atcgccggtc aaaccggata
     3481 atcgtgacga gatggctgct gtgttggcgg ctaatcaatg gacgcttgat gaaatcgcat
     3541 cgggcatggc atgggagcat atcaaatgaa agtatgggaa ggcatttatt tgccagaaag
     3601 cgaaacgcat ttgctggatt ggatgaaggc agtcaagcac tacgttgatg gcaagcctac
     3661 ttaccaatac agcaaatatg ccgaatgcct aaagatcatt aaaagccaca ggcttgccat
     3721 tgatgttggt ggcaaccttg gtctttggtc tagggttatg tgcctagact ttgatcgggt
     3781 tgaggcattt gagccagtgc ctgaatacgc tgaatacttc cgcaaaaacg caccaaacgc
     3841 caatcttaac gaagttgcgc tatcggactc tgaggaaatc atcacaatgg cttgcgctac
     3901 caatggctct tgt
//
LOCUS       DATBNL010000409         2959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_94631, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000409 DATBNL010000000
VERSION     DATBNL010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94631"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2336
                     /locus_tag="VIC30_07160"
     CDS             <1..2336
                     /locus_tag="VIC30_07160"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY7804197.1"
                     /translation="APQHQAHRIYNDHIEQPREERLVKALRITLIAIVGITVVIAAAA
                     AIFVATFDANRYKPEIEQLVLENTGRVLTIDGDVHLTLFPNIGAEVGQATLSDKDPDQ
                     AFITFQSTNVSVELWPLLSGDVFVDGVTIDGLSAIMTRDKAGAFNFSDLISGDQTADD
                     KADQAKSAASGAASSSANPASSFALDIRSVTLTNASLTFNDLQNRMDWSISDLNLSTG
                     QIARQASGKFKLAANVKSQTMALDGKLNVESDYKIDLATQQLSLNQISNQLSGNWRDL
                     KDLTSDLKLNLDANLKDNAFAVSDLDLKGTANLAGQAIELTTTASGVQSKGNDIEVKP
                     STLNLTIKESGRALSTELALPAFTFTGETLAINGLDTDLSVTDPALGKEPLKVTAKGD
                     LTLNTKAQTVATVLSGQFDGSPIKARVDVAGFDQPTITFDVALDALKLDRFGATTQAA
                     SPRSETNAANNEITNGASNGTNNGRSATQATQTNTIDLSALKGPNIKGKVSIGQVLSG
                     GLREGLRINQVKANVALNQGKLQVAPHSAQLFGGKLEGSLLVDAYTNRFTLKENITGI
                     KLDSLLMALGQEPNITGQGALVLDLATTGTTFASLEQNLSGNARVNLKDGSVKGIDIG
                     KILNNVRSMLGKAPTQQGSGSGQTAFTELAASATIAKGIATNKDLSVKAPLFRLEGAG
                     TINIPDSSLNYLAKVAVVETSEGQGGKDLAALKGVTVPIRISGQFNDPKYSVDVASLA
                     AELAKSKLGDQLGDRARDEINKVAPGLGDAIKGLFGR"
     gene            2418..>2959
                     /locus_tag="VIC30_07165"
     CDS             2418..>2959
                     /locus_tag="VIC30_07165"
                     /inference="COORDINATES: protein motif:HMM:NF024571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804198.1"
                     /translation="MSLTHRTAAATVERLARGFPVVALTGPRQSGKTTLARHLFADKP
                     YVSLENPDELRFARDDPKRFLGRFKNGAVIDEIQRCPALMSWLQGIVDEHQVMGEFII
                     TSSVRFELVRAFTQSLAGRIGRVDLLPLGSKELSMGHRQPATLEEAMLEGGYPDLHVG
                     SVSKQKRLSDWFSKYIATYV"
BASE COUNT          786 a          830 c          729 g          614 t
ORIGIN      
        1 ctgcgccaca acaccaggca caccggatct acaatgacca catagaacaa cctcgcgagg
       61 aacgacttgt gaaagcatta cggatcacgc ttatagccat tgtcggtatc actgtggtca
      121 ttgcagcggc ggccgcaata tttgtggcca cctttgatgc caatcgctat aaaccagaga
      181 tcgaacaact ggtgctcgag aacacaggcc gggtactgac cattgatggt gatgttcatc
      241 tgacgctctt tcccaacatc ggggctgagg taggtcaagc cactttgtca gacaaagacc
      301 ccgatcaggc tttcatcaca tttcaatcca ccaacgtatc cgtcgaactg tggccactgc
      361 tctcagggga tgtatttgtc gatggtgtaa caatcgacgg cctgtctgcc atcatgacgc
      421 gcgacaaggc cggtgcgttt aatttttcgg acttgatctc gggcgaccaa accgcggatg
      481 acaaggctga tcaagcgaag tctgctgcca gcggtgctgc cagcagctcc gccaaccccg
      541 cctcatcatt tgcgttggac attcgctcag tgacattaac caatgcgagc ctgacgttta
      601 acgacctaca aaaccgcatg gactggtcga tctctgacct gaatctatcc accggtcaaa
      661 tcgcccgcca agccagcggc aaattcaagc tcgctgccaa cgttaagtca cagaccatgg
      721 ctctagatgg caagctcaat gtcgaaagtg actacaaaat agacttggcc acacaacaac
      781 tcagcctgaa ccaaatctcc aatcaactat caggcaactg gcgcgacctc aaagatctca
      841 cgtctgatct gaaactgaat cttgacgcaa acctcaaaga caatgccttt gcagtatcag
      901 accttgatct taagggcacc gccaatctcg cgggtcaagc cattgaactg acgaccactg
      961 ctagtggcgt tcaatccaaa ggtaacgaca tcgaagtcaa gccgagtacg ctaaatctca
     1021 cgattaaaga atccggtcgt gcgttgagca ctgagcttgc gctaccagcg tttaccttta
     1081 ccggcgaaac acttgccatc aacggacttg acaccgatct gtcagtcacc gaccctgcac
     1141 ttggcaaaga accactgaaa gtaactgcca aaggtgatct gacactgaac accaaagctc
     1201 aaacggttgc caccgttctg agtggtcagt ttgacggctc gccgatcaaa gcccgtgtcg
     1261 atgtcgccgg gtttgatcaa cccacgatca catttgatgt tgcactcgat gcactcaagc
     1321 ttgaccggtt tggcgccaca acacaggccg cgagcccacg ttctgagacg aacgctgcca
     1381 ataatgagat aaccaatggg gcaagcaacg gaacaaacaa cgggagaagt gctacgcaag
     1441 ctactcaaac taacaccatt gatctctcag cactcaaagg ccccaacatc aaaggcaagg
     1501 taagcatcgg gcaagtgctg tctggaggtc tgcgtgaagg cctgcgcatc aatcaggtta
     1561 aagccaatgt cgcgttaaac cagggcaagc tgcaagtcgc gccgcacagc gcccaactgt
     1621 ttggtggcaa attagaaggc agcctgttgg ttgacgccta taccaatcgc ttcaccctaa
     1681 aagagaacat cacaggcatc aagctcgatt cactattgat ggccttgggc caagaaccca
     1741 acatcaccgg tcaaggcgcg cttgtcttag atctcgcgac aaccggcaca accttcgcat
     1801 ctcttgaaca aaacctttca ggtaacgcac gagtaaacct gaaagacggt agtgtcaaag
     1861 gcattgatat cggcaagatc ctaaacaacg tgcgcagcat gctcggcaaa gcgccgacac
     1921 agcaaggctc aggttcaggt caaacggcgt tcaccgagct cgccgcgtcg gccaccatcg
     1981 ccaagggcat tgccaccaat aaagatctga gcgtcaaagc ccccctattt agactcgaag
     2041 gtgcgggcac gatcaatatt cccgactcat cgcttaacta tctagccaag gtggcagtag
     2101 tagagacctc tgaaggccaa ggtggcaaag acttggcagc gctcaaaggc gtgacagtgc
     2161 ccattcggat ttctgggcag tttaacgatc ccaagtacag cgtcgatgtc gcaagcctag
     2221 cggctgagtt ggcaaagtcc aagctcggtg atcaactcgg cgatcgtgcg cgcgacgaga
     2281 tcaataaagt cgcgcctggc ttgggtgatg cgatcaaagg tttgtttggc cggtgatgta
     2341 tcaagtgatg tgtcaggtgt gggcagcggt ctacacctct gacctaaaag caattctgac
     2401 caacaacacg catcaaaatg tctctgaccc accgcacagc agccgccact gttgaacgcc
     2461 ttgcacgcgg ctttcccgtc gtggcgttaa caggcccaag acagtccggc aagacaacgc
     2521 tcgcgcgtca cttgttcgcg gataaaccgt atgtctccct agaaaacccc gacgaactaa
     2581 gattcgcacg cgatgaccct aaacgctttc ttgggcgttt taagaacggg gcggtgatcg
     2641 acgaaataca acgctgtccg gcactcatgt cgtggttaca aggcatcgtc gacgaacatc
     2701 aagtcatggg cgaattcatc atcacgagct ctgtccgatt tgagctggtc cgagctttca
     2761 cgcaatcttt ggctggtcgg attggtcgtg ttgacctgtt accgctaggt agcaaagaac
     2821 tctcaatggg gcacagacaa ccggcaacac tggaagaggc catgcttgag ggcggctatc
     2881 cggacttgca tgtcggatcg gtttcgaaac agaagagact atcggactgg ttctccaagt
     2941 acatcgcgac ttacgttga
//
LOCUS       DATBNL010000410         6733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174011, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000410 DATBNL010000000
VERSION     DATBNL010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6733
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174011"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /locus_tag="VIC30_07170"
     CDS             complement(<1..959)
                     /locus_tag="VIC30_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017455588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7804199.1"
                     /translation="MKQSRFTNKALFAPFRTAALCGAIAIGFGSVASAEQVLRIGMTA
                     ADVPRTLGQPDQGFEGNRFTGIPMYDALTQWDLSEYDAPSVLMPALATSWKVDPADQT
                     KWVFTLRDDVKFHDGSPFNADAVVWNVDKVLNDQAPHFDASQVGVTASRMPTLRSARK
                     IDDYTVELTTSEPDAFLPLNLTNLFMASPAHWQAKYDAVPADVTDPSERAKQAWIAFA
                     SDASGTGPFKMDKFVPRERVEVVKNPDYWDPERTAKLDRVIMMPMPEANARTAALLSG
                     QVDWIEAPAPDAIPQIEARGFEVYSNPQPHVWPWQLSFAEGSP"
     gene            1590..2840
                     /locus_tag="VIC30_07175"
     CDS             1590..2840
                     /locus_tag="VIC30_07175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005792994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEY7804200.1"
                     /translation="MTATLQQDTVEVSSERLYDSLMELAKIGATAKGGNCRLALTDLD
                     GQGRNLVTGWMKDAGMTVTVDQVGNIFGRRAGRDPARAAVMTGSHIDTQPTGGKFDGC
                     FGVLAGLEVVRTLNDHGIETDAPIDVAIWTNEEGTRFVPVMMGSGAFVGKFKLEDILN
                     TTDAQGKRVGDELMAIGYAGSERLGERTVGAYFEAHIEQGPILEHEQKTIGVVTGSLG
                     LRWYDITVTGMEMHAGPTPMPIRQDALYAATFIMQDVVQNALDHAPHGRGTVGSATVH
                     PSSRNVIPGKVTFTVDIRHADADELEHMRQRLLGTCKAIGDKHRVDIEIKEVSYFPPT
                     PFDTDMVDTVRQATRASGYPHMDIVTGAGHDAVYLAGVAPTAMIFVPCKDGISHNEIE
                     DAKPEDLGAGAQVLLHAMLQKAKD"
     gene            complement(2914..4125)
                     /locus_tag="VIC30_07180"
     CDS             complement(2914..4125)
                     /locus_tag="VIC30_07180"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY7804201.1"
                     /translation="MGPLESISMLELAGHATLTLAATSESAMNVDVILLVAYVSLALI
                     FSFLCSVAEASLLSITPAYVAGLRQKNPKRAELLRQLKGERIDQALAAILTVNTIAHT
                     IGAIGAGAQANAVFGSVWFGVFSAVMTLMILFLSEIVPKTLGAVYWREVSGATALYVN
                     FLIKTMYPLIVVSEALTKWIAGGKKTGDFDRDEFVAMAGLGHEMGHLNERESAIIGNL
                     FGFKSLKTSAIMTPRVVVSALKSSWSVDKALTKTGDVSFSRLPIYPETIDEISGFVLR
                     EDLLLAQSRGQGAEKVNAFRRDLVAVLDTLPVSKVLETLLQERQHIALVVGEYGETEG
                     IVTLEDVVETLLGSEILDEGDRVVDMQELAQQLRKKRAERHGIKLGEQPTKPSGDKSQ
                     HAQKAPDSSTS"
     gene            complement(4236..5549)
                     /locus_tag="VIC30_07185"
     CDS             complement(4236..5549)
                     /locus_tag="VIC30_07185"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804202.1"
                     /translation="MSQFKQFISPWYLGYAFQGAAVLGLAPILLPLVVGGALGSSAAG
                     MVVACFYVGQLASPLLGNLADRTKAFRLIYALGYVLLAAGLSGFALVESLVFWSLLAF
                     VQGLGSAATNTVAAMFIVEYSPKKDWDGKIGWLQTFYGAGQAAGLGLAAIAQAHPTLG
                     LLLSAALMAPGLFLGLRGLPDTGRSGANTHTPLRQRTKDLQAKAARLISTGPRNLSHL
                     VHRYHPQVGGLVGGLLKNLKTPYGLYILAWFACMFGTWLLYNLYPLLMKSAFDIEADR
                     SSLFYALAAVIGVFFYAPSGKLGKLIGDVAVVALGTIVTLICLLAMSMLAWWQPDDAG
                     WWALLAFIPIPVAWSPLIVAGTAAAAQLSSLNEGKAVGIFNATTAIASVLSAFAAGWV
                     ADLLSYTWVLILAAIATAIACVLLMPLLKQNKSGQAGSTDDESAA"
     gene            5919..>6733
                     /locus_tag="VIC30_07190"
     CDS             5919..>6733
                     /locus_tag="VIC30_07190"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY7804203.1"
                     /translation="MNKALAYAAFGITACLTLLGCAAPKQTFVDPITDTPASWSSTLP
                     TQELKDASRYPWWQALENSRLDSLVDQALAQNTSVARSAKAVQLANQQLNTVKLGWLP
                     SLTLFGGRITGNTSLFFQGLPIPVSDVGNFVGILPNYFINLFRLPYEQRQAMELVDVA
                     RAQMLAVRLAIAGEVVSAYALALSAQQELVLLRELSGRIARQERLLTDLQSVGMASQS
                     MVNQVKAQQSGIRGQMALARANAVAARNALNILVRNPLGTELASDSLENVAVG"
BASE COUNT         1725 a         1867 c         1683 g         1458 t
ORIGIN      
        1 cagggtgaac cttctgcaaa agacaattgc caaggccaaa catgaggctg tggattgctg
       61 tagacctcaa agccacgggc ttcgatctgt ggaatggcgt ctggcgcagg tgcttcgatc
      121 cagtcgacct gacctgacaa tagcgcggcg gtccgggcat tggcttccgg catcggcatc
      181 atgatcacgc gatcaagctt ggctgtgcgc tctgggtccc aatagtcagg atttttaacc
      241 acttcgacac gctctcgtgg aacaaactta tccatcttga acggaccggt gcccgaagca
      301 tctgaagcaa atgcgatcca ggcttgctta gcgcgttcgg acggatcagt cacatcagca
      361 ggaacggcat catattttgc ctgccagtgg gccggtgagg ccataaacag gttggtcaag
      421 ttcagcggta aaaacgcatc tggctcgctc gtggtcagct cgaccgtgta gtcatcaatc
      481 ttgcgcgcgc tgcgcaacgt cggcatgcgt gaggcggtca caccgacctg acttgcatca
      541 aaatgcggcg cttgatcatt gagcactttg tcgacgttcc acacaaccgc atcggcatta
      601 aagggagaac cgtcatgaaa cttaacgtca tcacgcaatg taaagaccca tttggtctga
      661 tcggctggat caactttcca agatgtggcc aaagctggca tcagcacact cggggcgtcg
      721 tattcggaca agtcccactg cgtgagtgcg tcatacatgg gaataccagt aaagcgattg
      781 ccttcaaagc cttggtctgg ctgcccgagt gttcgaggaa cgtcagccgc agtcatgcca
      841 atgcgtaaaa cctgctcagc gctggcaaca ctgccaaagc caatggctat cgccccgcac
      901 agtgcagccg ttcgaaaggg tgcaaacaac gctttatttg taaatctcga ctgtttcatg
      961 aagtaaccca tcctaaaaat ggttaagtga atttcgatcg cctcaaagaa gactgtgttg
     1021 gaactgatcc ctgactacga cagcacctac ttgactaagc tctttttacg atcaccgttg
     1081 gctggtcaag ccaagacaaa tccttcacag caaaatgcgt gccaactgcc aaactagtta
     1141 agaatcgccc tacaaataac catacacagc gacgcctgac tgcattgcta cacaatcagc
     1201 gttaaacgat aagcaatccg gacctagcca catcgactgc acaaacaaag aacttcatac
     1261 cgatagtgcc gcacccaaat aaagccataa gcacaataag agtgcaccat gcaccatcgg
     1321 catacgtgga atttcgcaca gcacaaccct cggcgcaaca gaaaaacact agggttaact
     1381 ctagattgca tacaattatg cgtatcttta ttgcatacaa tttcgtggca tattttttgc
     1441 atacaattta aaaataagat cattgattca tggtcgttgc ttagttacga ttgatttact
     1501 agcgaggcaa ttcagggccg tttgatgagt ttgcattcaa gtccaaacag ccaacaccac
     1561 gccacaccat ccctactgat gaggtttcca tgacagccac tttgcagcaa gacaccgtcg
     1621 aagtctcttc cgagcgtctt tatgattcat tgatggagtt agccaaaatt ggcgccaccg
     1681 caaagggtgg taactgtcga ttggcgttaa ccgatcttga tggtcagggg cgcaatctgg
     1741 ttactggttg gatgaaagat gcaggtatga ccgtgacggt tgaccaggtg ggcaatatct
     1801 ttggccgccg tgcaggccga gacccagcgc gcgccgccgt gatgacaggc agtcacattg
     1861 acacacaacc gacaggcggc aaattcgatg ggtgctttgg ggtgcttgcc ggtttagaag
     1921 tggttcgcac actgaacgat cacgggatag agacagacgc accgatcgat gtcgcgattt
     1981 ggaccaatga agaaggcacc cgttttgtgc cggtcatgat gggctcaggt gcgtttgttg
     2041 gtaagttcaa gcttgaagat attttgaaca ccacggatgc ccagggcaaa cgcgtaggcg
     2101 atgaacttat ggctattggc tatgccggca gcgagcggct aggtgagcgc actgttggcg
     2161 cctattttga agcccatatc gaacaaggcc caattcttga gcacgaacaa aaaaccatcg
     2221 gcgttgtcac gggctccttg gggctgcgct ggtatgacat cacagtcact ggcatggaaa
     2281 tgcatgccgg gcctacaccc atgcccattc gtcaagatgc actctacgct gccaccttca
     2341 tcatgcaaga cgtggtgcaa aacgcgctag accatgcacc ccatggccgt ggcacagtgg
     2401 gctcggccac tgtgcacccc tcttctcgaa atgtcatccc tggcaaagtc acctttaccg
     2461 ttgacattcg ccatgccgat gcagacgagc ttgaacacat gcgccagcgc cttttaggga
     2521 catgcaaggc gattggcgat aaacaccgcg ttgacattga aatcaaagaa gtctcttatt
     2581 tcccgcctac cccgtttgat acggacatgg tcgatacggt gcgccaagca actcgcgcaa
     2641 gcggctatcc acacatggat attgtgacgg gcgccgggca cgacgcggtc taccttgccg
     2701 gcgtggcgcc cacggccatg atatttgtgc cctgcaaaga cggcatcagt cacaatgaga
     2761 ttgaagatgc caagcctgaa gatctaggtg ctggtgcgca agttctgttg cacgcaatgc
     2821 tgcaaaaggc gaaagattag gcactttgca cttaacgcgc ccggacgatg gcctgcgcca
     2881 cattgccggc gcgccaccta cccatttcgc ctatcatgag gtggacgagt ctggcgcctt
     2941 ttgcgcatgc tgcgatttat ccccggacgg cttggtcggt tgctcaccta gtttgatacc
     3001 gtgtcgttct gcccgttttt tgcgcaactg ctgagccaat tcctgcatat cgacaactcg
     3061 gtcgccttcg tcaaggattt cgctgcccag tagcgtttca accacatctt cgagcgtgac
     3121 aatcccctcg gtttcaccgt attcaccgac gacaagggca atgtgctggc gctcttgcaa
     3181 cagcgtctca agcaccttag agaccggcaa ggtgtcaagc acggcgacca aatcacggcg
     3241 aaacgcattg accttttctg caccctgacc acgcgactgt gccagtagca agtcctcgcg
     3301 taatacgaac ccactgattt catcaatggt ctctggataa atgggtaacc gagaaaaaga
     3361 cacatccccc gtcttggtca aggctttgtc gacggaccag ctcgacttca aggcgctgac
     3421 caccactctg ggcgtcatga tggcactggt ctttaatgac ttaaatccga acaaattgcc
     3481 aataatggct gattcacgtt catttaaatg ccccatctcg tgaccgaggc ccgccatggc
     3541 gacgaactca tctcgatcaa agtcgccggt ttttttaccg cccgcaatcc atttggtcaa
     3601 agcctctgag accacgatca aagggtacat ggttttaatc agaaaattga cataaagagc
     3661 cgtcgcacca ctaacctcgc gccagtaaac cgcaccaagt gtcttaggca cgatttccga
     3721 caaaaagaga atcatcaggg tcatcaccgc agagaaaacg ccaaaccaca cactgccgaa
     3781 caccgcattg gcctgggcgc ccgcaccaat ggcgccaatc gtgtgggcga tggtattaac
     3841 ggtcaaaatg gctgccaagg cctgatcgat gcgctcaccc tttagttggc gcagtaattc
     3901 agcccgtttg ggattttttt gccgaaggcc agctacataa gccggcgtga tgctcagcaa
     3961 agaagcttca gccaccgagc acaggaaaga gaagatcagt gccaacgaca cgtaggcgac
     4021 taacaaaatc acgtctacgt tcatggccga ttcactcgta gctgccaagg tcaaagtggc
     4081 atgcccagcg agttcgagca tgcttataga ttcaaggggt cccatcaggg ctttcttaac
     4141 ctctgcgtaa tttttataga ctcacttata gcccaaaacg ccgtgaccgt ggttggacgg
     4201 caccagcact tgcagttctc accgtcccga tgcgcctaag ccgctgattc atcatcggtt
     4261 gagcccgctt gccctgattt gttttgtttg agtaaaggca ttaacaacac gcaggcgata
     4321 gccgtggcaa tcgccgccaa aatcagtacc caagtgtaac ttaacaagtc ggccacccag
     4381 ccggcagcaa aggcgctaag cacactggca atggccgtgg tcgcattaaa aatgccaacc
     4441 gctttgcctt catttaaaga cgacagctgc gccgcagcgg ccgtaccggc cacgatcaag
     4501 ggtgaccaag ccaccggaat ggggataaat gccaatagag cccaccagcc agcatcatct
     4561 ggctgccacc acgccaacat gctcatggcc aacaaacaga tcaacgtcac aatagtgccc
     4621 aaggccacca ctgccacatc accaatcagt ttgccaagct tgcccgaggg ggcatagaag
     4681 aagacaccga tcactgcagc cagagcataa aaaagtgacg atcggtcagc ttcgatatca
     4741 aaagctgact tcatcaaaag cggatataag ttatagagca accaggtgcc aaacatgcag
     4801 gcaaaccacg ccagaatata taggccataa ggcgttttaa ggttcttcaa gagcccaccg
     4861 accaagccac cgacttgggg atggtagcga tgaacaaggt gactcaggtt cctaggacca
     4921 gtcgatatca agcgtgcggc tttggcctgc aagtccttgg ttctttggcg caatggcgta
     4981 tgcgtgtttg cgccacttcg acccgtgtca ggcaaacccc gcaaccccaa gaataaaccc
     5041 ggtgccatca atgcggcact tagcaataag ccaagggtag gatgtgcttg tgcgatggca
     5101 gcgagtccaa gacctgcagc ctgccctgcc ccatagaacg tctgcaacca gcctatcttg
     5161 ccatcccagt ctttcttggg cgagtactca acgatgaaca tggctgccac ggtgtttgtg
     5221 gctgccgaac ccagcccctg aacaaacgcc agcaaactcc aaaacaccaa actctcaacc
     5281 aatgcaaagc cactcaaacc ggcggcgagc aatacatagc ccagagcata aattagacga
     5341 aaggctttgg tgcgatccgc taaattaccc agcaatggcg aagccagttg cccgacataa
     5401 aaacaggcca ccaccatgcc cgcggctgaa ctgcccaacg caccgcccac caccagcggc
     5461 aaaagtattg gtgctaaccc taaaacagca gcaccttgga acgcgtagcc aaggtaccag
     5521 ggtgagatga attgtttgaa ttgactcata aaggaaatgt tagtatttcg ttcaaagcaa
     5581 tcacggtaac agtccattgg ctaggctgtc gagtcgcaga aagtcagtca ggacatggtg
     5641 gtcagtgcac ggtggtttgg ccattgacaa cccgggaggc tgcgctttag aaatatttag
     5701 tgcgcaacga gtcaatgcgt ggcaagtcaa tgcgtaacga gtcaacgtta gcgctacttc
     5761 gaccaaggca ggggtcattg tttgaaacct cgatcctaag tcgctaagat tgacgctttt
     5821 gtcgctctct ggatgtctga tttacccagg ggcatgcgag tattggcgtg atcgtatgag
     5881 gtaacaaggc tcgcgccgcg ctttagaact ggtttaggat gaataaagct ttagcctatg
     5941 cggcgtttgg gatcacggcc tgcttgacgt tgcttggatg cgccgcaccc aagcagacgt
     6001 ttgttgaccc catcacagat acacctgcat catggagttc cacccttcca acgcaagagt
     6061 tgaaagacgc ctcacgttat ccttggtggc aagcgcttga gaactcacgc cttgactcac
     6121 tcgttgatca ggctctcgca caaaacacca gcgtggccag atctgccaag gccgtgcaac
     6181 tggccaacca gcaactaaac actgtcaaac tcggttggct gccgtcactc acgctgtttg
     6241 gcgggagaat cacaggaaat accagtctgt ttttccaggg gctacccata cccgtctcag
     6301 atgtgggtaa tttcgttggc atactgccga actacttcat caacctgttt cgcctgccct
     6361 acgagcagcg ccaggccatg gagcttgtcg acgtggcgcg cgcacagatg ctcgctgtac
     6421 gtcttgctat cgctggtgaa gtcgtcagcg cctacgcctt ggcactgtca gcccaacagg
     6481 agctcgtgct tttacgtgaa cttagtgggc gaatcgcaag acaagaacgc ctgctgaccg
     6541 accttcaatc cgttggtatg gcatcacaat cgatggtcaa tcaggtcaag gcacaacaat
     6601 caggtattag agggcaaatg gccttggcac gagccaacgc tgtggctgcg cgcaatgcgc
     6661 taaacatatt ggtcagaaac ccactcggca ccgagcttgc cagcgactcc ttagagaacg
     6721 tcgccgtcgg cga
//
LOCUS       DATBNL010000411         3134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154503, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000411 DATBNL010000000
VERSION     DATBNL010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154503"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VIC30_07195"
     CDS             <1..765
                     /locus_tag="VIC30_07195"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7804204.1"
                     /translation="RSGIGLLLIVGFMAMRGISFALHRGPWRAGVVAGLLFGFEFLLI
                     GEGLRYTTASHMAVFLYTAPIFTALGLHLFVPQERLSKAQWAGIILCFIGIASAFLGG
                     FAQPTISTAVLWGDFLGLMAGFLWGSTTVVLRVTGLNRIPAAQTTLYQLIAAFLILLI
                     AAAVSDQMTVNWTPALIAALAAQGVVIAFFTLLVWFWLLTHYLASRLASFTFLTPLFG
                     VGFGVLLLDDPLDAAFVFGAALVIVGVSIVNHPRSR"
     gene            776..1609
                     /locus_tag="VIC30_07200"
     CDS             776..1609
                     /locus_tag="VIC30_07200"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HEY7804205.1"
                     /translation="MCLAVLAINAHPDWPLIVAANRDEYHARPTQSMHPWPEKPDLLA
                     GKDLLAGGTWLGVTTSGRFALLTNVRDPAHHQHHAPSRGALIPDFLGSQRSTTQHLDT
                     LAQTAHQYNGFNLIAQQSDGQIWHASNYQTPFAHPMTAGVHGIANALLNTPWPKTQRT
                     TKALTTYLRSTTSMTADVLVDLLIDIMGDTTPVDDALLPSTGISLPRERLLSTPFIVS
                     PDYGTRCSTFLFRHRNANQWVQEDSYDATGTRIGRLRYGSVAGEPWRAIDAGPGSFST
                     D"
     gene            complement(1540..2259)
                     /gene="pdeM"
                     /locus_tag="VIC30_07205"
     CDS             complement(1540..2259)
                     /gene="pdeM"
                     /locus_tag="VIC30_07205"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008115870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEY7804206.1"
                     /translation="MKPETEHPMVVFGQHRLTLLPSGAIYCAALATLWVADVHLGKAA
                     TYRQLGQPVPQGTTTATLAQLSKDLQCYSVKHLVVLGDFLHGPQVHRSPSTLRAIEQW
                     REQHFSCDITLIRGNHDDRAGDPPQSLSISVVDEPYALSGIACCHDKRSVVVNDLPVL
                     WGHIHPVTVLKGRARERLRLPCFVVAPDHILLPAYGAFTGGHAYTPASDETLYVIADQ
                     SVLKLPGPASIARQGSPATEP"
     gene            complement(2249..>3134)
                     /locus_tag="VIC30_07210"
     CDS             complement(2249..>3134)
                     /locus_tag="VIC30_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013234255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HEY7804207.1"
                     /translation="KLLELVRIQDMTAYVRRATAKRAVVPRWLGGNLPLSSTLADAML
                     ARLDGVSPDNHTAWQAIEPLLAVQQRWSALPSQHYLLIEQWQSREGSHLFFYPFAGRH
                     VHLGLATLLAWRLAQQEPRTFTMAINDYGFELLCAQPLDAQSLAMTTLFDVDALQLDI
                     LASLNASELSQRRFREIARVAGLVFQGYPGAKKTARQVQASSGLFFEVFRQYDPDNAL
                     LHQANQEVLSQELDHQRLADTLTRLQAMPIKVQTLQRPTPFAFPLIVERLRERLSSEQ
                     LSDRVARLVKDLERAIET"
BASE COUNT          688 a          900 c          813 g          733 t
ORIGIN      
        1 cgctcgggca ttggtttgtt gctcattgtc ggctttatgg ccatgcgtgg catctcattt
       61 gctctgcatc gcggcccgtg gcgcgccggc gtcgtggccg gcctcttgtt tggctttgag
      121 tttttgctca ttggcgaggg attgcgctac accactgcct cacacatggc ggtgtttctc
      181 tacaccgcgc ctattttcac ggcacttggg ctgcatctgt tcgtaccgca agagcgccta
      241 tccaaagccc aatgggccgg cattattctt tgctttatcg gcattgcctc ggcctttctt
      301 ggtggttttg cccagcctac gatcagcacc gcggttttat ggggagactt tttgggctta
      361 atggccggct ttttgtgggg gtcaacaacc gtcgtgctgc gcgtcaccgg tctgaaccgc
      421 ataccagcag cccagacaac cctatatcaa ttaatcgccg catttttgat cctattgatc
      481 gccgccgccg tatctgatca gatgaccgta aattggaccc ctgccctgat cgcggcactt
      541 gccgcacaag gcgtggtgat tgcatttttt accttacttg tgtggttttg gttgttgacc
      601 cattatttgg catcacgctt ggcctccttc acgtttttaa cgccactctt tggtgtgggc
      661 ttcggggtgt tgttgctaga tgacccgcta gatgcagcct ttgtgttcgg ggcggcattg
      721 gttattgtgg gtgtatcgat cgtaaaccac ccaaggtcca gataaggaaa ccatcatgtg
      781 tctggccgtg cttgccatta acgcccaccc cgattggcca ctgatcgtgg cagccaatcg
      841 cgatgaatat catgcccggc cgactcaatc catgcatcct tggccagaga agccggactt
      901 actcgcaggc aaagatttgc tcgccggcgg cacctggctt ggtgtgacca cctcaggacg
      961 cttcgcactg ctgaccaacg tacgcgaccc tgcacatcat caacatcatg cgccctcgcg
     1021 cggtgcgctt attccagact ttctgggcag ccaacgcagc acaacgcagc atctagatac
     1081 acttgcccaa acagcccatc aatacaacgg ctttaatttg atcgctcagc agtccgatgg
     1141 ccagatctgg cacgcgtcga attatcaaac gccgtttgcg catcccatga cagcgggtgt
     1201 tcatggcatc gccaatgcat tactgaacac cccttggcct aaaacccagc gcacaaccaa
     1261 agcactgact acttacctga gatctaccac gtccatgacg gcagatgttt tggttgacct
     1321 gttgatcgat atcatgggtg acaccacccc ggtcgacgat gccctattgc catcgactgg
     1381 tatcagtttg ccgcgcgaac gactactgtc cacaccattt atcgtgagcc ccgattacgg
     1441 cacacgttgc agcacgtttc tatttcgaca tcgcaatgca aaccaatggg tacaagaaga
     1501 cagttatgac gctacaggca cacgaattgg gcgcctgcgc tatggctctg tcgccggcga
     1561 gccttggcgc gctatcgacg ctggacccgg cagctttagt accgattgat cggcaatgac
     1621 gtacagggtt tcgtcactgg caggcgtata ggcatgaccg ccggtaaagg caccataagc
     1681 tggcaagaga atgtgatcag gcgccaccac aaagcatggc aaacgcaagc gttcacgtgc
     1741 cctgcccttg agcacagtca ccgggtgtat gtgaccccat aaaaccggta ggtcgttaac
     1801 aaccacactg cgtttgtcat ggcagcaggc tatgccagac aaggcatagg gttcatcgac
     1861 aacagagatg gacaggcttt ggggtggatc acccgcgcgg tcatcgtgat tgccgcggat
     1921 cagcgtgata tcacatgaga agtgttgctc acgccattgt tcaatggctc gcaaagtcga
     1981 tggtgagcga tgcacttgcg ggccatgcaa gaagtcacca agtaccacca aatgtttgac
     2041 tgaataacac tgcaagtctt tactcagttg cgccagtgtc gccgtggtcg taccttgcgg
     2101 caccggttga cccaattgcc gataggttgc agctttgccc aaatgcacat cggccaccca
     2161 aagcgtcgcc agcgcggcac aataaatcgc gcctgatggc aatagcgtga gccggtgctg
     2221 cccaaacaca accatcgggt gttcggtctc aggtttcaat tgctcgctcc aagtctttga
     2281 ccagacgcgc tacccggtcg ctgagttgct ccgaactgag tcgttcacgc aatcgctcaa
     2341 cgatcaatgg aaatgcaaag ggtgtaggcc gttgcaaggt ctggacctta atcggcatcg
     2401 cctgcagtcg ggtcaaggta tcggctagac gctggtgatc gagctcttgg cttaacacct
     2461 cctggtttgc ctggtgcaac aatgcattgt cgggatcgta ttgacgaaac acctcaaaaa
     2521 acaaacccga agaggcctga acctggcgag cagttttttt agcgcccgga tagccttgaa
     2581 acaccaaccc cgccacgcgc gcaatttctc taaagcgccg ttgtgacagt tcactggcat
     2641 ttaggctcgc cagaatatct aactgcagcg cgtcaacgtc aaacaaagta gtcatggcca
     2701 atgattgcgc atcgagtggc tgtgcacaca gcagttcaaa cccatagtca ttgatggcca
     2761 tcgtaaaggt tcgtggttct tgctgcgcca atcgccaggc cagcaacgtc gccagaccta
     2821 gatgcacatg gcgcccggca aacggataaa agaacaaatg gctgccctcg cgtgattgcc
     2881 actgttctat caacaggtaa tgctgactcg gcaaggccga ccaccgctgt tgcaccgcca
     2941 acaagggctc aatggcttgc caggctgtat ggttgtcagg cgacacgcca tccagtctgg
     3001 caagcatggc atcagcaagt gttgaagaca atggcaaatt gcctcctagc caacgcggca
     3061 ctaccgcgcg cttggccgtg gcacgccgaa cataggccgt catgtcttgg atacggacca
     3121 gttctagcaa cttt
//
LOCUS       DATBNL010000412         4295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_134579, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000412 DATBNL010000000
VERSION     DATBNL010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4295
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134579"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /locus_tag="VIC30_07215"
     CDS             complement(<1..1065)
                     /locus_tag="VIC30_07215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY7804208.1"
                     /translation="MSRALRNVAIIAHVDHGKTTLVDQLLRQSGTFREHQQLDERVMD
                     SNDLERERGITILAKNCAVQYEDTHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAV
                     EGPMPQTRFVTRKALALGLKPIVVVNKIDRPGARPDFVVNATFDLFDKLGATEAQLDF
                     PVIYASGLDGYAGLEPSVRDGDMRPLFEAILQHVPTRDDDLDGPFQMQVISLDYSSYV
                     GKIGVGRVSRGRVKSGMEVVYQFGPDGQSGKGRINQVLKFQGLERVLVDEAQAGDIVL
                     INGIEDIGIGCTLMDVNGIEPLPMLRIDEPTLVMNFMVNTSPLAGREGKFVTSRQLRD
                     RLDRELKANVALRVRDTDDDT"
     gene            complement(1094..1834)
                     /gene="truB"
                     /locus_tag="VIC30_07220"
     CDS             complement(1094..1834)
                     /gene="truB"
                     /locus_tag="VIC30_07220"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEY7804209.1"
                     /translation="MRKRRGQIIDGVVLIDKPADCSSNHVLQRVKRLIDAQKAGHTGT
                     LDPFATGLLICCLGKATKIATRMLDADKQYVATLKFGQETDSGDLTGVTVADIGANYV
                     APDRDVVETALKQFVGTIEQVPPMTSALKHKGKPMYHYARQGIEIERPPRQVVIHDLR
                     LLEYDGATATISVDCSKGTYVRTLAQDIGRVLGVYAHLVALKRTRIGPFLLADAWSMS
                     SLESLDNVQRVVLATDTLPEPYRLEVIS"
     gene            complement(1856..2254)
                     /gene="rbfA"
                     /locus_tag="VIC30_07225"
     CDS             complement(1856..2254)
                     /gene="rbfA"
                     /locus_tag="VIC30_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEY7804210.1"
                     /translation="MARHKQKVAGGRNIRLADQIQKDLALLIQREIDSTRTGLITLSA
                     VEWSADYAHAKVYFTVLGAEPGLAQQALDEKAGWLHAQLFKLLHIHTVPTLRFFHDPH
                     VERGIEMSRLIDQANASDLVAKPDDAEPSA"
     gene            complement(2266..>4295)
                     /gene="infB"
                     /locus_tag="VIC30_07230"
     CDS             complement(2266..>4295)
                     /gene="infB"
                     /locus_tag="VIC30_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEY7804211.1"
                     /translation="AEAPPDPAALKGTLHKPAGTKTADKKPEGGKKTIKSGAMASTWS
                     DDANRKKPTGKQAAAPARDGWRAGKGGKGGKQRGRGAKVIQEVAPVEFVAREVHVPET
                     ITVADLAHKMAVKAAEVIKHLMKLGQMVTINQVLDQETAMIVVEELGHTAVAAKLDDP
                     EAFLEETASADFEETPRAPVVTVMGHVDHGKTSLLDHIRRAKVASGEAGGITQHIGAY
                     HVTTERGMVTFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAA
                     GVPLVVAVNKIDKPEANPDRVKQELVSEEVVPEEYGGDVPFVSVSAKTGQGIDDLLEN
                     VLLQAEILELKAAIDAPAKGLVIEARLDKGRGPVATVLVQSGTLHRGDNVLAGASYGR
                     VRAMLDENGKPVQSAGPSIPVEIQGLTEVPAAGDELMSLADERKAREIALFRQGKFRD
                     VKLARQQAAKLESMFEPTAEGMQTLSLIVKTDVQGSQEALVAALVKLSTEEIKVQVVH
                     AAVGGVSESDVNLAIASGAVVIGFNVRADQATRKLAENNGVDIRYYNIIYDAVDEVKA
                     AMSGMLSPERREEVVGMVEVREVYHISKIGTVAGCMVTDGLVRRDSHVRMLRDNVVIW
                     TGHIDSLRRFKDDVKEVKSGFDCGITLKGNNDIKVGDQFEAFEVREVARSL"
BASE COUNT         1008 a         1265 c         1021 g         1001 t
ORIGIN      
        1 cgtgtcatca tcggtgtcac gcactcggag cgcgacgttg gccttgagct cccgatcgag
       61 tcgatcgcgt aactgtcggc tcgtaacaaa ctttccttcc cggccagcca atggagaggt
      121 gttaaccata aagttcatga ccaacgtggg ctcgtcaata cgcagcattg gcaaaggctc
      181 aatcccgttt acgtccatca acgtgcaacc aatgccaata tcttcaatac cgttaatcag
      241 cacgatgtcg cccgcctgcg cctcatcaac gaggacccgc tcaagcccct gaaacttcag
      301 cacctggtta attctgccct taccagactg cccgtctggg ccgaattggt acacgacttc
      361 catgcctgat ttcactcggc cacgactaac acgaccaaca ccaatcttac ccacataact
      421 gctgtaatca agagagatga cctgcatctg gaagggacca tccaaatcat catcgcgcgt
      481 gggcacgtgc tgcaaaatcg cttcaaacaa cggacgcata tcaccatcac gcactgaggg
      541 ctctaggccc gcataaccgt cgaggccaga agcgtaaatc accggaaagt cgagctgagc
      601 ctcagtggca ccgagtttgt cgaataaatc gaacgtggca ttcaccacaa agtcagggcg
      661 tgcgccgggt ctatcaattt tattgaccac aacgatcggc tttaagccaa gtgcaagcgc
      721 cttacgcgtg acaaaccgcg tctgcggcat agggccttcg actgcatcta caagcaacag
      781 gacaccatca accatggaca gcacccgctc gacttcccca ccgaagtcgg cgtgtcctgg
      841 ggtatcaacg atgttgatgt gcgtgtcttc gtattgaacc gcacagtttt tggccagaat
      901 cgtaatgcca cgctcacgtt cgaggtcgtt ggagtccatg acgcgttcat caagctgctg
      961 gtgctcccgg aatgttccag actggcgtag caactgatca accagcgttg ttttgccgtg
     1021 atcgacgtgg gcgatgatgg cgacgttacg caaagcgcgt gacatattaa tttccttatg
     1081 aatctgatga caactacgaa ataacttcta atctataggg ttcaggcaaa gtatccgttg
     1141 ccaaaacaac acgctgcaca ttgtctaaac tctcaagcga tgacatcgac caggcatccg
     1201 ccaacaaaaa cggaccaatt cgggtacgtt tgagtgcaac caaatgcgca tagacaccta
     1261 acactcgccc gatatcttgc gctaacgttc ggacgtaagt tcctttgctg caatcaaccg
     1321 agatcgtggc tgtggcgcca tcatattcaa gcagcctaag gtcatgaatc acaacctgtc
     1381 tgggcggcct ctcgatctca atgccttgtc gtgcgtagtg atacatcggc tttcccttat
     1441 gctttagagc cgatgtcatc ggtggtactt gctcgatcgt accgacgaat tgtttcaatg
     1501 ctgtctcgac cacatcacga tctggcgcga cataattagc gccgatatca gccaccgtca
     1561 caccagtcaa atcacctgaa tctgtctcct gtccaaactt caatgtcgcc acatattgct
     1621 tgtcagcatc caacatacgc gtcgcgattt ttgtggcctt gcccaaacaa caaatcagca
     1681 gtcccgtggc aaagggatca agcgttcccg tatgtccagc cttttgtgca tcgatcaaac
     1741 gtttgacccg ctgtaaaacg tggttgctgg aacaatccgc cggtttgtcg atgagcacga
     1801 caccatcaat gatctgacct cgtcgtttgc gcatgtaaaa gtacccgtac cctagttacg
     1861 ccgatggttc tgcgtcgtcg ggcttagcaa ccaggtcact ggcatttgct tgatcgatta
     1921 gacgcgacat ctcgatgcca cgctcgacat gtgggtcgtg gaagaaccgc aatgttggaa
     1981 cggtgtgaat gtgcagcaac ttaaaaagtt gtgcatgcaa ccaacccgct ttctcgtcca
     2041 aggcttgctg cgctagtccg ggttctgcac caagcaccgt gaaatagact ttagcgtgtg
     2101 catagtcagc ggaccactcc actgccgaca acgtaattaa gcctgttcgg gtgctatcaa
     2161 tctcgcgctg aatcagcaaa gccagatcct tctggatctg atctgctaat cggatgttgc
     2221 ggccacccgc aactttttgt ttatgtcgtg ccaaaacatc cgtccctaca gtgagcgcgc
     2281 gacttcgcga acttcaaagg cctcaaattg gtcaccgacc ttgatgtcgt tattaccctt
     2341 gagggtgata ccgcagtcaa acccggactt aacctctttg acatcatctt tgaagcgacg
     2401 caaggagtcg atatggcctg tccaaataac cacgttgtca cgcaacatgc gcacatgtga
     2461 gtcacgacgc accagcccgt cggtgaccat gcagccagcc actgtaccaa tcttggagat
     2521 gtgatagacc tcacgaacct caaccatacc aacaacttct tcgcgacgct caggagagag
     2581 catgcctgac atggctgctt tcacttcatc aacagcgtca taaataatgt tgtagtacct
     2641 gatatctaca ccgttgtttt cggcaagctt acgggtggct tggtcggcgc gaacgttaaa
     2701 gccaatgaca acagctccgg acgcaatggc caagttgaca tcgctttccg agacaccacc
     2761 gacggcggca tgcaccactt gaaccttaat ctcttcggtt gagagcttga ccaaggcggc
     2821 aacaagcgct tcttgagagc cctgaacatc ggtcttgact atcaacgaca gcgtttgcat
     2881 gccttcagcc gttggttcaa acatcgactc gagtttggct gcttgctggc gagctagttt
     2941 gacgtcacgg aatttacctt ggcggaacaa ggcgatttca cgcgctttac gctcatcggc
     3001 caatgacatt agctcatcac cggcagccgg cacttctgtc aaaccttgaa tctcgaccgg
     3061 aatggatggg cctgctgact gaaccggctt gccattttca tcgagcatgg cacgcacacg
     3121 accgtagcta gcacctgcca acacgttatc accgcggtgc aaggtacctg actgcacgag
     3181 cacagtggct acgggacctc ggcccttatc aagacgggcc tcaatcacca agcctttggc
     3241 cggcgcatca atggcagctt tcaactctaa gatttcagcc tgtaacagca cgttctctag
     3301 caaatcatcg atgccctgac cggtcttggc agacacggac acaaacggca catcgccacc
     3361 gtactcttcc ggaaccactt cctcggaaac aagctcttgc ttgacccggt ctggattggc
     3421 ctcaggttta tcaattttgt tgaccgccac caccagcggc acaccggctg ccttagcgtg
     3481 atggatggct tcacgcgttt gcggcataac cccatcatct gcagcaacaa ccaaaatcac
     3541 aatatcggtg gctttcgcac cacgcgcgcg catggccgta aaggcctcgt gtcccggcgt
     3601 gtccaagaat gtcaccatgc cacgttcagt ggtcacgtga taagccccga tgtgctgggt
     3661 aattccgcca gcctcaccgg atgccacttt ggcgcgtcgg atgtggtcaa gcaacgacgt
     3721 cttaccgtga tcgacgtgac ccatgacggt caccactggt gcacgcggtg tttcttcgaa
     3781 gtcagcagac gcggtctcct cgaggaaggc ttcgggatcg tctagtttgg cagcgaccgc
     3841 agtgtgacca agctcttcaa ccacaatcat ggctgtttct tgatcgagca cctgattgat
     3901 ggtgaccatt tgaccaagct tcatgagatg cttaatgacc tcagcggcct tgactgccat
     3961 cttatgcgcc aagtcggcta ctgtaatggt ctcaggcaca tgcacttcac gcgccacaaa
     4021 ttcaactggt gccacctctt gaataacctt tgcaccgcga ccacgctgtt tgccaccctt
     4081 accgccctta ccagcacgcc atccatcgcg cgcaggtgca gcagcttgct tgcccgtggg
     4141 cttcttacga ttcgcgtcgt cagaccaagt cgatgccatg gcaccggact tgattgtttt
     4201 cttgccaccc tcaggcttct tgtcagctgt tttggtgccg gccggcttat gcaacgtacc
     4261 tttcaaagcg gcaggatcag gcggtgcctc cgcgc
//
LOCUS       DATBNL010000413         2272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_183401, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000413 DATBNL010000000
VERSION     DATBNL010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183401"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..2013)
                     /gene="htpG"
                     /locus_tag="VIC30_07235"
     CDS             complement(106..2013)
                     /gene="htpG"
                     /locus_tag="VIC30_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019248757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEY7804212.1"
                     /translation="MTEATKPQASETMGFQAEVKQLLHLMIHSLYSNKEIFLRELISN
                     ASDACDKLRFEALDKPELFESEPDLRVRVDYDKEARTITVSDNGIGMSREDAVSNLGT
                     IARSGTREFFSKLTGDNQKDAQLIGQFGVGFYSSFIVADKVTVRSRRGGLPANEGIEW
                     VSDGQGEFSIANIDKPERGTDIVLHLRAEEDELLSNWKLREILRRYSDHISLPVEMPK
                     EEWDEKASEMKRTGEWEAVNQASALWTRNKSDITDDQYKEFYKHVSHDFDEPLAWTHN
                     RVEGRSEYTQLLFIPKRAPFDLWDRDAKRGVKLYVKRVFIMDDAEQLLPSYLRFVRGV
                     IDSADLPLNVSREILQESRDVRTIREGSAKRILSLLEDLAENRKDDYATFWSTFGQVL
                     KEGTGEDMANQERIAKLLRFASTQNDTDAQDVSLADYVSRMKEGQDKIYYVTAESYNA
                     AKSSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREFDGKQLSSVAKGGLDLEALADEEE
                     KKKQSEVADAYKPLVERLNKALTEKVKEVRVTLRLVDSPACVVVDENEMSPHLQRLLQ
                     SAGQQAPTVLPILEINPDHSLIKRIESATDEQFDDWAALLLDQALLADGSQLSDPVGF
                     VKRMNELLLKG"
BASE COUNT          512 a          609 c          576 g          575 t
ORIGIN      
        1 ggcggttaga ccagttgccc gatgagggtt agcgtaaaac caagctaaaa agcaaagcta
       61 aaaactaagc tgcgagctaa gttgcaacct aggttgcaat gaagatcagc ctttcaacag
      121 cagctcgttc atgcgcttga cgaacccgac cgggtcagac aattgcgagc catcggccaa
      181 tagcgcctga tcaagtaaca aagctgccca atcatcgaac tgttcatcag tggctgattc
      241 aatacgcttg atgagcgagt gatcggggtt gatttccaga atgggcaata ccgttggtgc
      301 ttgctgacca gccgattgca gcagtctttg caagtgtggg ctcatctcgt tttcatcgac
      361 caccacgcag gcgggtgagt caacgagtcg cagcgtgacg cgcacttctt tgactttttc
      421 agtcagcgct ttgtttagac gctcaaccaa tggcttatag gcatcagcca cttcagattg
      481 ttttttcttt tcttcttcgt cagccagtgc ttcgagatcg aggccacctt tagccaccga
      541 tgatagttgc ttgccatcga actcacgcag gtgcgagagc atccactcat ccacccgatc
      601 ccacaacagc aacacttcaa tgcctttttt acggaagatt tccaggtgcg ggctgctctt
      661 ggcagcgttg tagctttcgg cagtgacgta gtaaatcttg tcttggcctt ctttcatgcg
      721 actcacatag tcagcgagtg acacgtcttg agcatcggtg tcgttttgcg ttgaggcaaa
      781 gcgcaacagc ttggcaatgc gctcctggtt ggccatgtcc tcgccggtac cttctttcag
      841 tacctgacca aaggttgacc agaaggtagc gtaatcatcc ttgcggtttt ctgcgaggtc
      901 ttccaagagg cttaagatcc gcttggcaga cccttcacgg atggtgcgca catcacggct
      961 ttcttgcaag atttctcgtg acacgttcag tggtaagtcg gctgaatcga taacgccacg
     1021 cacaaagcgt aggtatgacg gtagcagttg ctcggcgtca tccatgatga acacgcgttt
     1081 gacgtagagc ttcacgccac gcttggcatc acgatcccag aggtcaaatg gcgcgcgctt
     1141 ggggataaag agcagctggg tgtattcact gcgaccttcg acgcggttgt gggtccatgc
     1201 cagtggctca tcaaagtcgt ggctgacgtg tttatagaac tctttgtact ggtcgtcggt
     1261 gatgtcggat ttgttgcgtg tccacaaggc actggcctgg ttcacggctt cccattcacc
     1321 ggtgcgcttc atttctgacg ctttttcgtc ccactcttcc ttgggcattt caaccggcag
     1381 gctgatgtga tctgaatagc gacgcaggat ttctcttagc ttccagttac ttaaaagctc
     1441 gtcttcttcg gcgcgcaggt gcaacacgat gtcggtgccg cgctcaggct tgtcgatgtt
     1501 ggcaatagaa aactcaccct ggccatcgga cacccactcg ataccttcat tagctggcag
     1561 accaccgcgg cggctgcgca ccgtgacttt gtcggcgacg ataaaggagg aataaaaacc
     1621 aacgccgaac tgaccaatca gttgggcgtc tttttgattg tcaccggtta gtttagagaa
     1681 gaactcacgg gtaccggatc gtgcaatggt tccgaggtta gataccgcat cttcgcgcga
     1741 catgccgata ccgttatcgg acacagtgat cgtacgcgct tctttgtcgt aatcaacgcg
     1801 cacgcgcaga tcgggctcag actcaaacag ttctggcttg tctagggctt cgaatctgag
     1861 cttgtcgcag gcgtctgatg cgttagagat caactcgcgt agaaagattt ctttgttgct
     1921 gtagagcgaa tggatcatga gatgcagcag ctgctttacc tctgcctgaa atcccatggt
     1981 ctcggaagct tggggcttgg tcgcctcagt catgatgtca cctgttccta tgtctttgaa
     2041 atcaaaatat ttccgggttg gccagagcaa tcaacttgca accgacttgc aaacactgcc
     2101 ctcgcgcatc gcccacgatg gacagtacat tggggcaatc gccccaattt caagacccgc
     2161 accggaaaac aggccctttg ccagagcctc caagaacacc atccaaccgc accctacacg
     2221 ttgcgatcaa attacacgta taatcccaac cttcatgaga tgagcctcat cg
//
LOCUS       DATBNL010000414         2274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_15188, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000414 DATBNL010000000
VERSION     DATBNL010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15188"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VIC30_07240"
     CDS             <1..275
                     /locus_tag="VIC30_07240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804213.1"
                     /translation="SYVVNALHKPFAVFFNDAGVGKDQAGIEALKILDELHILAFAYG
                     HDSARIGQAADGLENGIVTHVNQTANNFAATIGGPVHDLVARLRDR"
     gene            425..>2274
                     /locus_tag="VIC30_07245"
     CDS             425..>2274
                     /locus_tag="VIC30_07245"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY7804214.1"
                     /translation="MAHDPTTPPRNPRYTSTHWGVYEIKQEPGEPPHLEAFKADPDPS
                     EIGLTMLQASTRLRVAKPVVRQSVLEQGLGAAPERRGLEPFVEVSWDQALDLAAQAIG
                     QTIKEHGNCAIFGGSYGWSSAGRFHHAQSQVHRFLNAAGGYVRHMDSYSLGAGRVVLP
                     HVVAPMEDLMATHTSWDVMAKHTELFVTFGGVPRKNAQVNPGGASEHLVKGGLYAMAD
                     AGVEFVNLSPTRADLDVGGAFEWIPIRPNTDVACMLGLAYAIHAANGHDREFLATYCV
                     GFERFEAYLTGQSDGQPKTPAWAAAICGVPADQIERLAARMMGARTMLNICWAAQRAH
                     HGEQPFWMIVTLAAMLGQIGLPGGGFGVGYGAMNMMGMANTQFGGPTLPQGRPQIPDL
                     IPVARITDMLEKPGQTFHYNGTAYTYPKIELIYWAGGNPFHHHQDLKRLIHAWRQVPH
                     IIVNEQFWTTNAKLADIVLPATTAFEREDIGFATRDRYMIAMQQILPPYEQARDDYDI
                     FAGLAMRLGCHDTFTEGRDARAWIKHLYADCRPRAKAAGIDLPEFEQFWAQGTIDLSK
                     PGQYNNMLEDFRQDPNANKLNTPSGRIEIYSDRIESFNHDDCPPHPTWMEP"
BASE COUNT          535 a          674 c          615 g          450 t
ORIGIN      
        1 caagctacgt ggttaacgct ctgcacaagc catttgcggt gttctttaac gacgccggtg
       61 taggcaaaga ccaagcgggt atcgaagcat taaagatact ggacgaactg cacatcctgg
      121 cctttgccta tggacatgac agtgcacgta tcgggcaggc tgccgatggt ttggaaaacg
      181 gcatcgtcac ccatgtcaac caaaccgcca acaacttcgc tgccaccatt ggtggcccag
      241 tgcacgatct ggtggcacgg ctgcgggata ggtgagtcgt tgtgctaaaa aatcagcagt
      301 agatatgaac gccagatacg gacgaacgat acgagcgacc gatacaagcg accgatacaa
      361 gcatttaaac ctagcaccga agcacaacaa caagcacaac aactagctag tcccggagac
      421 atcgatggcg cacgacccta caaccccacc ccggaatcct cgctacacat cgacacactg
      481 gggcgtctat gagatcaagc aagagcctgg cgagcctcct cacctagagg cgtttaaagc
      541 agaccccgac ccgtccgaaa tcggcttgac catgcttcaa gccagcaccc ggctgcgtgt
      601 cgctaaaccc gtggtgcgtc aaagcgtgct tgaacaaggc ctcggagccg cgcctgagcg
      661 ccgcggactc gaaccgtttg tcgaggtcag ttgggaccaa gcactcgatc tcgctgccca
      721 agccattgga cagaccatta aagagcacgg taattgcgcc atatttggtg ggtcatacgg
      781 ctggtcaagt gccggcaggt tccatcacgc gcaaagccaa gtacatcggt ttttaaacgc
      841 cgccggtgga tatgtgcggc acatggattc ttacagccta ggggctggac gagtggtgct
      901 gccacacgtg gtcgccccca tggaagactt gatggcaacc cacaccagtt gggatgtgat
      961 ggccaaacac accgaactgt tcgtgacctt tggcggcgta ccccgtaaaa acgcccaagt
     1021 caatccaggt ggtgccagcg aacatttggt caaaggcgga ctttacgcca tggccgatgc
     1081 cggtgttgag tttgttaact taagccccac ccgcgctgac cttgatgttg gtggtgcctt
     1141 tgaatggatt ccgattcggc ccaacaccga tgtggcctgt atgttgggct tggcctacgc
     1201 tattcatgcg gccaacggtc acgaccgaga gttcctcgcc acctactgcg tggggtttga
     1261 acgattcgag gcctatctca ctggccagtc agacgggcaa cctaaaaccc ctgcatgggc
     1321 agccgcgatc tgtggcgtac ctgccgatca aattgaacgc ctggctgcgc gcatgatggg
     1381 cgcacgcacc atgctcaaca tctgctgggc ggctcaacgc gcccatcatg gcgagcagcc
     1441 tttctggatg atcgtgacgc tcgctgccat gttggggcaa atcggcttgc caggcggtgg
     1501 gtttggcgtg ggttacggcg ccatgaacat gatgggcatg gccaacaccc agtttggtgg
     1561 accgactttg ccgcaaggtc gcccgcagat accggatctg atccccgtgg cgcgcatcac
     1621 cgacatgctg gaaaaacccg gacaaacgtt tcactacaac ggcaccgctt acacctaccc
     1681 caagatcgag ttgatctatt gggctggtgg caatccgttt caccaccacc aagacttaaa
     1741 gcgtctgatt cacgcctggc gccaagtccc gcacattatc gttaacgaac agttctggac
     1801 caccaacgcc aaactcgctg acattgtgtt gccggccacg accgcctttg agcgtgaaga
     1861 catcgggttc gccacgcgtg accggtacat gattgccatg cagcaaatcc tgccgccgta
     1921 tgagcaagcc cgtgatgatt acgacatctt cgcggggctg gccatgcggc tagggtgcca
     1981 cgacacgttt actgaaggcc gtgatgcgcg tgcgtggatc aaacatttgt atgcagattg
     2041 ccgaccgcgc gccaaagccg ctggcattga cctgcccgag ttcgaacagt tctgggcgca
     2101 aggcaccatt gatctttcta agcccgggca atacaacaac atgctcgaag acttccggca
     2161 ggatcccaac gccaacaaac tgaacacacc atcgggtcgc attgagattt acagtgatcg
     2221 catcgaaagt ttcaatcacg acgactgccc accccacccc acgtggatgg aacc
//
LOCUS       DATBNL010000415         4573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_114343, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000415 DATBNL010000000
VERSION     DATBNL010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114343"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /gene="hslU"
                     /locus_tag="VIC30_07250"
     CDS             <1..185
                     /gene="hslU"
                     /locus_tag="VIC30_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011806774.1"
                     /note="heat shock protein involved in degradation of
                     misfolded proteins; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HEY7804215.1"
                     /translation="NEQTENIGARRLYTVMERLLEDVSFDATSHSGQTIVIDASYVND
                     KLQETASSQDLARYVL"
     gene            244..825
                     /locus_tag="VIC30_07255"
     CDS             244..825
                     /locus_tag="VIC30_07255"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEY7804216.1"
                     /translation="MPDRLTVITTRTGDDGVTSLADGSRVPKTHPRVNALGDVDELNS
                     QLGLLLAQFAEVPHHEKLKILAKALKPVQHALFDIGSELAIPEYTQLKPEQLAHLDEQ
                     AQTINAELPSLKEFILPGGSTLSAQAHVVRSVCRRAERSVVAMHQAELSEGDPEKLLS
                     QRYLNRLSDLMFIVARAINQALDQPDVFWNKVG"
     gene            complement(899..1858)
                     /gene="lipA"
                     /locus_tag="VIC30_07260"
                     /pseudo
     CDS             complement(899..1858)
                     /gene="lipA"
                     /locus_tag="VIC30_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018006678.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
     gene            complement(1984..2616)
                     /gene="lipB"
                     /locus_tag="VIC30_07265"
     CDS             complement(1984..2616)
                     /gene="lipB"
                     /locus_tag="VIC30_07265"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010923.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEY7804217.1"
                     /translation="MGTQRWPGLTEYEPCWQAMKDFTESRTSDTLDELWLVEHAPVYT
                     LGQAGKPEHILNPGAIPVVKSDRGGQVTYHGPGQVVVYVLADLKRTGLTIRGMVQALE
                     QALIDTLVELGLPDACRKPGAPGVYLPEPDGSLSKIAALGIKVRKGCTYHGVALNVDM
                     DLAPFSGINPCGYEGLKTVSLASMGIQTSWDQVAATLAGRILVRAQLRVE"
     gene            complement(2640..2924)
                     /locus_tag="VIC30_07270"
     CDS             complement(2640..2924)
                     /locus_tag="VIC30_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 family protein"
                     /protein_id="HEY7804218.1"
                     /translation="MTQEASASHKTSLIDYPCEFPIKVMGKQDPGLAQALVEVVLAHD
                     PGFDPATVEIRMSKQGNYVGLTFTVRATSREQLDALYKALHGHPLVSVVL"
     gene            complement(3008..3907)
                     /locus_tag="VIC30_07275"
     CDS             complement(3008..3907)
                     /locus_tag="VIC30_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid aminotransferase"
                     /protein_id="HEY7804219.1"
                     /translation="MFDATQAIQGVQGDPVVYVNGQYVPLSKASVSVLDRGFVFGDGI
                     YEVVPIYHQQPFRMREHLDRLDRSLAKLEITPPMSRQQWQALIEQLLAQQPVMETAMV
                     YIQVTRGVAKRDHAFPSPPVSPTVFAMVSPMTPPAEKLRSEGVRAISIEDVRWLHCDI
                     KSVSLLGNVLAKQAAVKAGVDEVIQFRDGFMTEGAACNVWMVQDGKVYGAPKDHQVLE
                     GIRYGLFESLCQQCGLSFVLEPISRERVIQAEELMVSSATREILPVVELDGQAVGTGQ
                     PGPIYKRLRQAYDNCLAELAPPA"
     gene            complement(3939..>4573)
                     /locus_tag="VIC30_07280"
     CDS             complement(3939..>4573)
                     /locus_tag="VIC30_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEY7804220.1"
                     /translation="TTTVRDLAILAQRMITDHPNEYKVYSQREFTYNNIKQANRNRLL
                     WADPSVDGMKTGHTEAAGYCLISTAQRGERRVISVLVGADSEATRAEESLKLVNWAFQ
                     NFDTVKLVDQGEAAIEARVWEGTSEIARLGTDEAIWLTIPRGKTGDVQLLAQRPDPLL
                     APLTQGQRVGTLTLTVDNQPLRVLPLDVMTAVERAGFFSRAIDQFKLWLQ"
BASE COUNT         1074 a         1319 c         1148 g         1032 t
ORIGIN      
        1 tcaacgagca aaccgaaaac atcggtgccc ggcgtctata cacagtcatg gaacgattgc
       61 tcgaagacgt atcgtttgat gccacctcac acagtggtca aacgattgtg attgatgcca
      121 gctatgtcaa cgacaaactt caagaaacgg cgagcagcca agatttggct cgatatgttc
      181 tttgaccgtt cgttttaacg acggctttga ccattttttg ctttaaccaa cttagagaac
      241 cagatgcctg accgattgac tgttatcacc acccgtaccg gcgacgatgg tgtcacaagc
      301 ttggccgatg gctcacgggt ccccaagacc cacccccgtg tcaatgcgct cggtgatgtc
      361 gatgaactca acagccagct tggcttgttg ctcgcccagt tcgctgaggt accccatcac
      421 gaaaaactca agatcctcgc taaagcgcta aagcccgtgc aacacgcttt gttcgatatc
      481 ggcagtgaac tcgccatacc tgaatacaca caactcaagc ccgagcagct tgcccatctc
      541 gacgaacagg cacaaacgat taacgcagag ttacctagct tgaaggaatt catcttgccg
      601 ggcggatcga cattgtcggc tcaagctcat gtggtgcgca gtgtgtgtcg tcgagccgaa
      661 cgctccgtgg ttgccatgca tcaggctgag cttagcgaag gggatcctga gaagttgctc
      721 tcgcaacgct acctgaaccg cctgtcggat ttgatgttca tcgtggcacg cgccatcaat
      781 caagcgctcg atcagccaga tgtattctgg aacaaagtgg ggtagtacgc caccgcacca
      841 gtggcatgcg cggctcagtt aatgtccagt taatgtccag ttattgccca gctattgctt
      901 agatacccac acctgccgcg tgcgcttgct catcggcgtg ataggacgat ctgaccatgg
      961 cacccacagc cgcatggcta aagcccatgg cataggcttc gcgctcaaac atggcaaacg
     1021 tatcggggtg cacataacgc aacacaggca agtgatgcgt tgaaggctgt aaatactgcc
     1081 caatggtcag catgtctaca tcatgcgcac gcatgtcacg catgacttcc agaatttcct
     1141 catcggtctc acccaagcca accatcaaac ctgacttggt aggtacacct ggacaacggg
     1201 ttttaaagtc ttgcaacagt ttgagcgaat gtccctagtc cgcacccggg cgagcctgtt
     1261 tatataaacg cggcacggtc tcaaggttgt ggttcatcac atctggcggg gcttcgtcga
     1321 atatgcccaa ggcacggtca agacgaccac ggaaatccgg taccaacact tcaatgcggg
     1381 tacttggcga caggcgtctg acttcctgaa tacattgtac gaagtgtgct gcaccgccat
     1441 cacgcaaatc atcgcgatca actgacgtga tcactacata attcagtttc agcgcagcaa
     1501 tggttttagc cagattcaac ggctcgtcaa catcaagcgg gtcaggccga ccatggccca
     1561 catcacaaaa cgggcagcga cgtgtgcact tgtcgcccat gatcatgaag gtggccgtgc
     1621 ccttaccgaa acactcaccg atattggggc acgatgcctc ttcacagacg gtgtagaggt
     1681 tgtgttcacg caaaatacgt ttgatgtcgt agaaccgcga cccagccggt gcggttttaa
     1741 cgcgaatcca ctccggcttt ttaagccgct cagccggcac gatcttgatc ggtatgcgcg
     1801 ctgtcttggc ttctgatttt tgtttggcgg ttgcgtcgta cgtttgtgcg ttaggcattt
     1861 tatttccagt gtggcgtaca aacgcccacg ttgtagggct cgttgcggtg tttacaccaa
     1921 gagcctttca catcacccta gctgcaacca tcaacgacag ccactaggga gaacccgaat
     1981 atttcattct actcgcagtt gcgcccgcac gagaattctc cctgccaggg tcgcggctac
     2041 ctgatcccaa ctggtctgga tccccatgct tgccaggcta acggttttca gtccttcgta
     2101 gccgcaaggg ttgatgccag aaaaaggcgc caaatccatg tcgacattca acgctacacc
     2161 atggtatgta cagcccttgc gcactttgat gcccagtgca gcgattttgc tcagcgaccc
     2221 gtcaggctca ggcagataaa caccgggtgc cccgggcttg cggcatgcat caggcaatcc
     2281 cagttcaacg agcgtgtcga tcagggcctg ctcaagcgcc tgaaccatgc ctcgaatcgt
     2341 cagtcccgtg cgctttaaat cggccaacac ataaaccacc acttgccccg ggccgtgata
     2401 ggtgacttga ccaccccgat ccgacttaac aaccggtatc gcgccaggat tcaagatatg
     2461 ttcgggcttg cccgcctgcc ccagtgtgta aaccggggca tgttcaacca accaaagctc
     2521 atcgagggta tctgatgtac gtgactcggt gaagtccttc atggcctgcc agcaaggttc
     2581 atactcagtc aggccaggcc aacgctgagt accaattggc accgtggacg atgattgcac
     2641 tacagcacca ccgacaccag cggatggcca tgcaaggcct tatacagcgc gtcaagttgc
     2701 tcgcgcgacg tcgcgcgcac ggtaaatgtc aggccaacat aattgccctg cttactcatg
     2761 cgaatctcta ctgtggccgg gtcgaaaccc gggtcatgcg ctaaaacaac ctcgaccaaa
     2821 gcctgggcca atccgggatc ttgcttgccc atcactttga tcggaaactc acaggggtag
     2881 tcaatcagcg atgttttatg cgaagcgctt gcctcttgcg tcatggtgtt tctcggttac
     2941 gtaagttacc taagttctaa gttgcctaag ttgcatcggt tacgttcagt tgtaccttct
     3001 atgcagatta tgccggcggt gccagctcgg ccaggcaatt gtcatacgct tggcgcagac
     3061 gcttgtagat cggtccgggt tgacccgtgc ccactgcctg cccgtcaagc tcgacgaccg
     3121 gcagtatttc acgcgtggca gacgacacca tcagttcctc ggcttggatc acacgctctc
     3181 ggctaatggg ctctaagaca aacgacagac cacattgctg acaaagcgac tcgaacaaac
     3241 cgtagcggat accttctagt acctgatggt ctttgggtgc gccataaacc ttgccgtctt
     3301 gaaccatcca gacattgcaa gccgccccct cggtcatgaa accatcgcga aactggatga
     3361 cctcatcgac acccgctttg acagcggcct gcttagcaag cacattgcca agcaacgaca
     3421 ccgatttaat atcacagtgc aaccaacgta cgtcttcaat actgattgca cgcacaccct
     3481 ctgaacgcaa cttctctgcg ggtggtgtca tgggtgagac catggcaaat acggtaggtg
     3541 acaccggcgg gctaggaaag gcatgatcgc gcttggcaac gccgcgggtg acctggatat
     3601 aaaccatggc ggtttccatt accggttgtt gcgctaacaa ctgctcgatc aatgcctgcc
     3661 attgttggcg actcatcggt ggggtgatct cgagtttggc caaactgcga tcgagccgat
     3721 caagatgctc tcgcattcga aacggctgct ggtgataaat cggcaccacc tcatagatac
     3781 catcgccgaa cacaaaacca cgatcaagta ccgatacgct ggccttagac aatggcacgt
     3841 actggccatt gacgtagacc acagggtcgc cttggacgcc ctgtatcgcc tgtgttgcgt
     3901 caaacatgct gctgccctat cgatttattg ttgttcaatc actgaagcca aagcttgaac
     3961 tggtcaattg cacggctaaa gaagcccgcg cgctccacgg cggtcataac atcaagcggc
     4021 aaaacccgaa gcggctggtt gtccacggta agcgtcaggg tgccaacgcg ctgaccttgc
     4081 gtcaaaggcg caagcagtgg atcagggcgc tgcgccaaca actgcacatc accggtttta
     4141 ccgcgtggaa tggtcaacca gatcgcttca tcggtaccaa gcctagcaat ttccgatgta
     4201 ccttcccaga cccgcgcttc gatggcagct tcgccttgat caacgagctt gaccgtgtcg
     4261 aaattctgaa acgcccaatt cacaagcttc aaactttctt cggcgcgagt ggcttcgcta
     4321 tcagcaccca ccaaaacgct aatgacgcga cgttcaccgc gttgcgccgt cgaaatcagg
     4381 caataaccag cagcctcggt gtggcctgtt ttcataccat cgactgaagg gtctgcccag
     4441 agcagacgat tgcggttggc ttgcttgatg ttgttataag taaactcacg ctgtgagtag
     4501 actttgtact cgttcggatg gtcggtgatc atgcgctgcg ccaaaatcgc taagtcacgc
     4561 accgtggtcg tgt
//
LOCUS       DATBNL010000416         4553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154528, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000416 DATBNL010000000
VERSION     DATBNL010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154528"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..399
                     /locus_tag="VIC30_07285"
     CDS             136..399
                     /locus_tag="VIC30_07285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804221.1"
                     /translation="MDGWDDLREADNAQWKELRISQDDLNIAFLRCFTTEAGQEVLDY
                     LKAMTLDQPSWYPGEDPSHGFAREGQNSIVRDIVRRIEKGREV"
     gene            396..1199
                     /locus_tag="VIC30_07290"
     CDS             396..1199
                     /locus_tag="VIC30_07290"
                     /inference="COORDINATES: protein motif:HMM:NF017233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804222.1"
                     /translation="MSEAVMETENTESTSENTGLLSPEIQSNDAPEEQAMPHMAEVEE
                     TPIANDNEIDWGDRPDWMPENFWDEKDGPDLEGIAQAYQELRTKMSQGKHKAPKDGKY
                     DISSLKDHGVPEDDALLGQFSKFAAENGLSQEQFEQIADMYVNNVGELFEKVNFDREQ
                     ELQKLGPKGDKVVAGLNSWLGKLANSGTLSQEEVDAVASAATNANYIKALNKIRASYG
                     EQTIPDVGIQEGKATTRADLDAMVGDERYGKDMHYTQQVERKFMEFFGE"
     gene            1365..2207
                     /locus_tag="VIC30_07295"
     CDS             1365..2207
                     /locus_tag="VIC30_07295"
                     /inference="COORDINATES: protein motif:HMM:NF040375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HEY7804223.1"
                     /translation="MAVQISNAFVTLFDSEVKQAYQGQRLLAGVTRERTNVEGSTVKF
                     PKIGKGTATIRVPQADVTPLNVSYSQVTATMEDYIAAEYSDIFNQQKVNFNDRQELVQ
                     VVSGAIGRRMDQVILDALAASSTSNTVSNDIGGTDSNLNVAKLREAKNLLDTKNVPME
                     GRTILAHANSLQSLLGETEVTSADFNTVRALVTGEINTFLGFRFITFGDRDEGGLPVD
                     GSSDRTLYAFHRDAIGMAIGMGMASRVDYIPEKTSFLVASMFSAGAVAIDDEGIVKLT
                     CRES"
     gene            2221..2526
                     /locus_tag="VIC30_07300"
     CDS             2221..2526
                     /locus_tag="VIC30_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804224.1"
                     /translation="MAFNKEGLNVAAQSKAGEAPQFFTYKTDDTAATVDTAGYFDNGA
                     TANTGMRNIMKVGDLVYVHANASGTTPTYGLHIVTQVSAAGIIDVTNATALGGTDSD"
     gene            2556..3167
                     /locus_tag="VIC30_07305"
     CDS             2556..3167
                     /locus_tag="VIC30_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804225.1"
                     /translation="MAEKYTQKHSGVAIFCGSAPCVFSDLEKAKELYPDATVYGANFV
                     GAMIPEIGHIWTQHGELAHKIVERTGRSLTIHARPRKQKTGGGMWFLPAGDHAWQYVN
                     YEWPDLYWVAGSSGIAGAMWAKHGMGHDTVIMCGVLLDPDSNGYADPYPGKSLDGSRA
                     LQKDRIAVWRDILLLYQQEGRTEGVYAMSGFPKEVLGAPDGIR"
     gene            3154..3771
                     /locus_tag="VIC30_07310"
     CDS             3154..3771
                     /locus_tag="VIC30_07310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804226.1"
                     /translation="MASGDTKLSICSDALIMLGASPLSSFTEGTDAAQICDRLYDDLK
                     DSLVASYPWSWSFKKVQLARLTSTPVNEWKYNYSMPGDRLAGFRAVFNSGQAGVRPIQ
                     AGWEILGDTLQTSEEQIFVDYQYSPQEFELPTYFVQLVKYAMAAEIAETVTDQITKAQ
                     YFEQKAFGTPGENRRGGYFRVAMNIDGASKPTEAFEDYSLISVRQ"
     gene            3768..>4553
                     /locus_tag="VIC30_07315"
     CDS             3768..>4553
                     /locus_tag="VIC30_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804227.1"
                     /translation="MSRVIQVQTNFTGGELDPKIRARIDLAQYYNSLETAQNVVIQPQ
                     GGMVRRDGSRYIAELPASAGDAVRCVPFEFSVDDSYMLVFVDERMYVFKDQVLITDIN
                     GSGDDYLDVTNVTDAVIPTMCWAQSADTLILVQQSMAPQKIVRGASDSAWTVSTVSFD
                     FIPKFAFTLTTAAGSTFATHEYLSLDATEGQVTVIAKDSDDNAEDIFTASAATYENQY
                     INVTPQGRLRIVQKVSDSQLKCFAEIPIFESDVSATETRIPVAD"
BASE COUNT         1223 a         1053 c         1197 g         1080 t
ORIGIN      
        1 atgttggctt acattgcaca aaaaatgaac gtgccgcagt cattgctgaa ctcgcaagag
       61 cagaaagaac aaatcatgca gcaaatgatg caaatgcaac aagcacaggc accacaaccg
      121 ccacaggagt gatgaatgga tggctgggat gatttgcgcg aagcagataa cgcgcaatgg
      181 aaagaactaa gaattagcca agatgatctg aatatcgcat ttttgcgatg ctttacgacc
      241 gaagcaggtc aagaagtttt ggattatttg aaggcaatga ctttggatca accgtcatgg
      301 tatccaggtg aagacccatc gcacggcttt gcccgcgaag gtcaaaactc aatcgtgcga
      361 gacatcgtgc ggcgcatcga aaaaggaagg gaagtatgag tgaggcagta atggaaacgg
      421 aaaatacgga gtcaacctcc gaaaataccg gattattgag tccagaaatt cagtcaaacg
      481 acgcacctga agagcaggca atgccacaca tggcagaggt cgaagagacg ccaattgcta
      541 atgacaacga gattgattgg ggtgatcgcc ctgattggat gcccgaaaat ttttgggatg
      601 aaaaggacgg gcctgatctt gagggcattg cgcaggcata ccaagagctg cgtacaaaga
      661 tgtcgcaggg taagcacaag gcaccgaagg atggcaagta cgacatctca tcgctgaagg
      721 atcacggtgt accagaagac gacgcgcttc tgggtcagtt cagcaagttt gctgctgaga
      781 atggattgag ccaagagcag tttgagcaga tcgcggatat gtacgtcaac aatgtcggcg
      841 agctgtttga aaaggtcaac tttgatcgtg agcaagaatt gcaaaagctc ggcccaaaag
      901 gtgacaaggt ggttgccggc ctaaacagtt ggctcggcaa gttggcgaac tctggcacat
      961 tgtcgcaaga ggaagtggac gctgtggcga gtgctgcaac caatgccaat tatatcaaag
     1021 cattaaacaa gattcgtgca tcctatggtg agcaaaccat cccagatgtc ggaatccaag
     1081 aaggaaaagc caccactcgc gccgatttgg acgcaatggt tggagacgag cgctacggaa
     1141 aagacatgca ctacacgcaa caagtcgagc gtaagttcat ggaattcttc ggagaataat
     1201 tgtcaagggg gcaaatgccc cctttttctt tgcgcaaaat ctgatatatt ccattcaacc
     1261 gacaactcag attcctgagc cggcgacctg actaatgcgg cccaccatgg ataaccgtca
     1321 caggatttac cttttttgtt tttttgattt aggagaagtt ccaaatggca gtacaaatct
     1381 caaatgcctt tgtgaccttg ttcgactcag aggtaaagca ggcgtatcag gggcaacgtc
     1441 tcctggctgg tgttacccgc gagcgtacaa acgtcgaagg ctcaacagtt aagttcccta
     1501 agattggtaa gggtacggca actattcgcg tcccacaggc tgatgtaact ccgctcaacg
     1561 tgtcctactc tcaggtcact gcgacaatgg aagactacat tgctgcggaa tactcagaca
     1621 tcttcaacca gcagaaggtc aactttaatg accgtcaaga gctggtacag gttgtatctg
     1681 gtgcaatcgg tcgtcgcatg gatcaggtga tccttgacgc attggcagca tcttcaactt
     1741 caaacactgt gtctaacgac atcggtggta ctgactctaa cctgaacgta gcgaagctgc
     1801 gtgaagcgaa gaacttgctt gacacgaaga acgtgcctat ggaaggccgt actattcttg
     1861 ctcacgcaaa ctctttgcag tcattgttgg gtgagacaga agttacttct gctgacttca
     1921 acactgttcg cgcattggtt actggtgaaa tcaacacatt cctcggcttc cgtttcatca
     1981 cttttggtga tcgtgacgaa ggtggtttgc ctgttgacgg atcgtctgac cgtactttgt
     2041 atgcgttcca tcgcgacgcg attggtatgg caatcggcat gggcatggct tctcgcgtgg
     2101 attatatccc tgagaagact tcgttcttgg ttgcttcaat gttctcagcc ggcgcagttg
     2161 cgattgacga tgaaggtatc gtcaagctca cttgccgcga atcataagga gggctaagta
     2221 atggctttta ataaagaagg cttaaacgta gctgcacagt caaaagcagg tgaagctcct
     2281 cagttcttca cttacaagac tgatgacact gctgcaactg ttgataccgc cggttatttc
     2341 gataacggcg caacagcaaa cactggtatg cgcaacatca tgaaggtagg cgatttggtc
     2401 tacgttcatg caaacgcttc aggaactaca ccgacatacg gtttgcacat cgttactcag
     2461 gtatctgccg caggcattat cgacgtaaca aacgcaactg ctctcggtgg tactgactca
     2521 gactaaggca ttgggggctt cggccccctt ttctgatggc tgaaaagtac acacaaaaac
     2581 acagtggtgt tgctatcttt tgtggtagtg cgccctgtgt tttttctgat ttagagaaag
     2641 caaaagagct ttaccccgac gcgacggtat acggcgcaaa ctttgtcgga gcaatgatcc
     2701 cagagatagg gcatatctgg acacagcacg gtgagctggc tcacaagatt gttgagcgca
     2761 ctggtcgatc attgacaatt catgcacgcc caagaaagca aaagacgggt ggtggcatgt
     2821 ggtttctgcc agcaggagat catgcttggc agtatgtgaa ttatgagtgg cctgatttgt
     2881 attgggtcgc aggctcaagt ggcattgcag gggcaatgtg ggcaaagcat ggaatgggtc
     2941 acgacacggt aattatgtgc ggtgtgttgc tagatccaga cagcaatggg tatgctgacc
     3001 cgtaccctgg caagtcactg gatggcagcc gagcattgca aaaggatcgc attgcagttt
     3061 ggcgtgatat tctcttgcta tatcaacagg aaggaaggac tgaaggcgtg tatgctatgt
     3121 cagggtttcc gaaagaagta ttaggagcgc cagatggcat caggtgatac caaactttcg
     3181 atttgctccg acgcactaat catgctcggt gcctctccgt tgtcctcatt tactgagggc
     3241 acagacgcag cgcagatctg tgaccggctg tacgacgacc tcaaggattc attggttgcg
     3301 tcgtatccat ggtcttggtc attcaagaaa gtgcaacttg cacgcctgac atcgacacct
     3361 gtcaacgaat ggaagtacaa ctactccatg cccggtgatc ggcttgcagg atttagagcc
     3421 gtattcaatt cagggcaagc tggtgtgcgc ccaatccaag ctggctggga aatcctaggc
     3481 gacacattgc aaacaagtga agagcagatc tttgtggact accagtattc gccgcaagag
     3541 tttgaacttc ctacatattt tgtgcagcta gtgaagtatg caatggctgc tgagattgct
     3601 gagacggtca ccgaccagat caccaaggcg caatactttg agcaaaaagc atttggtacg
     3661 ccaggcgaaa accgtcgcgg tggttacttc cgagtcgcaa tgaacattga cggcgcaagc
     3721 aagccaaccg aagcctttga agattactct ctgatctcgg tgagacaatg agccgtgtca
     3781 ttcaagtaca aacaaatttt accggcggcg aactagaccc aaagattcgt gcgcgtattg
     3841 atctcgcgca atactacaac tctttggaaa cagcgcagaa cgtcgtcata cagccacagg
     3901 gcggcatggt tcgccgtgat ggctcccgtt atattgccga gctgccagcg tctgctggtg
     3961 acgctgtgcg ttgcgttccg tttgagttct cagtcgatga cagctacatg ttggtgttcg
     4021 tcgatgagcg catgtatgtc ttcaaggatc aggtgctgat tacagacatc aacggatctg
     4081 gcgacgatta tctggatgtc acgaatgtga ctgatgcagt aatcccgaca atgtgctggg
     4141 cgcagtcagc cgatacgctg atccttgtac agcagagcat ggcgccacaa aagattgtgc
     4201 gcggcgcatc tgattcagca tggactgtct caaccgtatc gtttgatttc atcccaaagt
     4261 ttgcatttac gctaaccaca gcagccggat cgacctttgc gacgcatgag tatttgtcac
     4321 tagatgcgac cgagggtcag gttacggtca ttgcaaaaga ctcagatgac aacgctgaag
     4381 acatctttac ggcatcggct gcgacctatg aaaaccagta catcaacgtg accccgcaag
     4441 gccggttgcg cattgttcaa aaagtatccg actcgcagct caagtgtttt gcagagatcc
     4501 caatttttga gtcggatgtc tcagcaacag aaactcgcat cccagttgcg gat
//
LOCUS       DATBNL010000417         3465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124628, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000417 DATBNL010000000
VERSION     DATBNL010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3465
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124628"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VIC30_07320"
     CDS             <1..661
                     /locus_tag="VIC30_07320"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
                     /protein_id="HEY7804228.1"
                     /translation="HFPADVDDDRVTVSDTNDRDAVERGQPPPGNLVSRYADDSSWRI
                     PVKTGTGGGDDWPVLASSSAVGGLGEARLISVVTSELSSRMQRDADLAFVDESIQASR
                     MPLRNTLVPPDVVPELGGKVVFQLPEGTFDGGDGVIWLYATLRDGTPLPDWIQFDGAT
                     GRIEADVPDSLAEPLEIRVQARDAHGETAETVFKILPRAEGLGFSGKPSLTAQFQQMM
                     D"
     gene            684..2330
                     /locus_tag="VIC30_07325"
     CDS             684..2330
                     /locus_tag="VIC30_07325"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY7804229.1"
                     /translation="MKGNRPIRTIKLSAVAVTCLIAAGCSVTPEPVTMDEQQALLAQD
                     RLNAFKDVEPVGPQLTLHEAVARGLKYNLELRARRMEQAIAMGAAEISSYDMLPQITA
                     NAGYNYRNNYFVTEAVGYYSGNPSLSEPFVNSSKDYWVGGAMLSWNLLDFGVSYYTAK
                     QNADRVLVASEKRRRVMHLLAQDIQIAYLRAASAQKLKDEIQHTIRAASVALSQTEQG
                     STEGLSNPLDSLRYQKALLDNIKILETIEQELATARVELNELVNLPPTAQYMLEDPDM
                     LLPPDSYANTPVQEFEVRALAHNADLKEGIYNARIAVEETRKSMLRLLPGLSFNIGPQ
                     VTDNQYWINQNWVEGAAQFSFNLWNILLAPQVRAQALANEELAVNNRMIVQMAVVSQV
                     YLSKIDLDNAYKLYQRSKQIETVDTRIAGITARNEREGTASKAERVAADASAILSRLR
                     KYQALAALYAASSRLQATAGLEPDIGSVDEIGLRELSAVVRQTYQQWNEGQLPALDFA
                     VADAGAVSAAQPSPELQSEPQPQSEPQRIRISLDDSAVAQ"
     gene            2343..3269
                     /locus_tag="VIC30_07330"
     CDS             2343..3269
                     /locus_tag="VIC30_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003070764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY7804230.1"
                     /translation="MRKWVGWLIAVVLVVAFAAVEWRPWALFASDPAAKIQAQTQAST
                     QQLSQPTAQLSEEMANAERGVVVSAPAAPIQTPVASENPDSRADLGPTIRAELTPVRY
                     TTLAAEINAKIQNLPVKEGQAFEAGAALVVFDCVVQKAQLARVRAELEIAQRNAQTNE
                     RLLKLGNISRVEAQNALSEAARAQAQVDELSAIVSKCEISAPYSGKVAEQRARVEQFV
                     QVGQPVLEILDDSGLELEFIAPSSWAPWLKPGHTFSIVIDETGKTYPAKVTRVAARID
                     SVSQTFKVVAQIDGEFTDLTPGMSGTITVNRP"
     gene            3266..>3465
                     /locus_tag="VIC30_07335"
     CDS             3266..>3465
                     /locus_tag="VIC30_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804231.1"
                     /translation="MSATPSATPSATTSATTSAADTLLRLARRARHAEDEATVRFVLV
                     NETYSLVPYQVALLWIEGEGVVS"
BASE COUNT          788 a          896 c         1022 g          759 t
ORIGIN      
        1 ccatttcccg gccgatgtgg atgacgatcg ggtaacggtg tctgacacca acgatcgaga
       61 cgctgtggag cgggggcaac caccgccagg gaatctagtt tctaggtacg ccgatgatag
      121 tagttggagg attcctgtaa aaacgggtac aggcggcggt gatgattggc cggtgcttgc
      181 cagttccagc gccgttggcg ggttgggcga ggcacgtttg atttctgttg tgacttcgga
      241 actatcgagt cggatgcaac gtgacgcaga cttagccttt gtcgacgaat cgattcaagc
      301 cagccgcatg ccactgcgca acacgttggt gccaccggat gtcgtacctg agttgggcgg
      361 caaggttgtg tttcagttgc ctgaaggtac gttcgatggt ggtgatggcg tgatttggct
      421 gtacgccact ttgcgtgatg ggacaccttt acctgattgg attcagttcg atggcgctac
      481 cggccgtatc gaagcggacg tgccagactc cttggccgag cctttggaga tccgggttca
      541 ggcgcgagac gcccatggtg aaactgctga gacggtattc aagatcctgc cgcgcgcaga
      601 aggtctcggc ttctcgggta agccttcact gacagcacag tttcagcaaa tgatggattg
      661 acacaaccag tatgaacatt cgcatgaaag gcaaccgtcc gataagaact ataaaactct
      721 ctgctgtcgc agtgacatgt ctgattgcgg ctggctgcag cgtgacacct gagcccgtca
      781 ccatggatga acaacaagcg ctgttggccc aagatcgttt gaatgctttt aaggacgttg
      841 agcctgtcgg tccgcagctg acgctacatg aagccgtggc ccgcggcttg aagtacaacc
      901 ttgagttgcg cgcacggcgc atggaacaag cgattgccat gggtgcggcc gaaatatcaa
      961 gctatgacat gctgccgcaa attacggcca acgccggtta taactatcgc aataactact
     1021 ttgtgactga ggcagttggc tattactcag gtaacccttc gctgtctgaa ccgtttgtga
     1081 actcatccaa agattattgg gtgggtgggg cgatgctcag ttggaacttg ctggattttg
     1141 gggtgagtta ttacacggcc aaacaaaacg ccgaccgggt attggtagcc tctgagaaac
     1201 gtcgtcgcgt gatgcacctg cttgcacaag acatccagat tgcgtatctg cgtgcggcaa
     1261 gcgcgcagaa actcaaagat gagattcagc acacgattcg agcggccagc gttgcgttat
     1321 cgcaaaccga gcagggcagc acggaagggc tgagtaatcc actcgattca cttcgctatc
     1381 aaaaagcctt actcgacaac atcaagattc tcgaaaccat tgagcaagag cttgccaccg
     1441 ctcgggtcga gttaaatgag cttgtgaatc tgccaccgac agcgcagtac atgcttgaag
     1501 acccggacat gctgttgcca cccgattctt acgccaacac gcctgtgcaa gagtttgaag
     1561 ttcgagcctt ggcgcataat gccgatttga aagaggggat ttacaacgcg cgtatcgccg
     1621 tggaggaaac ccgcaaatca atgttgcgac tattgccggg gttgtcgttc aacataggtc
     1681 cacaagttac cgacaaccag tactggatca accaaaactg ggtcgaaggt gccgcgcaat
     1741 ttagtttcaa tttgtggaat attctgcttg cacctcaggt gcgtgcccag gcactggcca
     1801 atgaagagct ggcagtcaac aaccgtatga ttgtgcagat ggccgtggtc agtcaggtgt
     1861 acctctctaa aatcgatcta gacaacgctt ataagctata ccaacgctcc aagcagatcg
     1921 aaacagtcga cacacgcatt gctggcatta cagctcgtaa tgaacgtgag ggaaccgcta
     1981 gcaaagcgga gcgggttgca gccgatgctt cagcgattct gagccgtttg cgcaagtatc
     2041 aggccttggc agcgctatat gcggcgagtt ctcgcctgca ggcaactgcc ggacttgagc
     2101 ctgatatcgg tagtgttgat gaaataggct tgcgcgaact ctcggccgtt gttcgtcaga
     2161 cctatcagca gtggaatgaa gggcagttgc ctgcgcttga ttttgcggtg gctgatgccg
     2221 gcgcagtgtc tgcggcccaa ccgagccccg aactgcaatc cgagccccaa ccccaatccg
     2281 aaccccagcg cattcgcatc tcgcttgatg acagcgctgt agcgcaataa agaggaagac
     2341 tgatgcgaaa gtgggtgggt tggttgattg cggtggtgct cgtggttgcc tttgcggcgg
     2401 ttgaatggcg gccctgggcg ttgtttgcca gtgacccggc agccaagatc caggctcaga
     2461 ctcaagcttc tacgcagcag ttatctcagc cgacggctca gctgtctgaa gaaatggcga
     2521 acgcggagcg cggcgtggtg gtaagcgcac cggcggcacc gattcaaaca cctgttgcaa
     2581 gcgagaatcc ggactcgcgt gcggatttgg gtccgacgat tcgagccgaa ctcacgcctg
     2641 tgcgctacac cacattggcc gctgagatca acgccaagat ccaaaacctg cccgttaaag
     2701 aggggcaggc ctttgaggcc ggcgccgcac tggtggtgtt tgattgcgtc gtgcaaaagg
     2761 cccaattagc tcgggtgcgt gccgagttag aaatcgcgca acgtaacgcc caaaccaatg
     2821 agcggttatt gaagcttggc aacatcagtc gcgttgaggc acaaaatgca ttgtccgagg
     2881 ctgcccgtgc gcaggcgcaa gtcgatgagc tctcggcgat cgtgagtaag tgtgagatta
     2941 gtgcgcccta cagtggcaaa gtggccgagc agcgcgcgcg cgttgaacag tttgtgcaag
     3001 tgggccagcc cgtgttggag atcttggatg acagtggtct agagcttgag ttcatcgctc
     3061 cctctagctg ggctccttgg cttaagcccg gtcacacatt ctccattgtg atcgatgaga
     3121 cgggtaagac ctatccagcc aaagtcaccc gcgtagcagc ccgtattgac tcggtcagtc
     3181 agacgtttaa ggtggtggcg caaatcgatg gcgagttcac tgatcttacg ccaggcatga
     3241 gtggcacgat cacggtgaat cgcccatgag tgcgacccca agtgcgaccc caagtgcgac
     3301 cacaagtgcg accacaagtg cggccgacac attgctcagg cttgcgcgcc gggctcgcca
     3361 tgccgaggac gaagccacag tccgatttgt gttggtcaat gagacctaca gtttggtgcc
     3421 gtaccaagtg gcactgctgt ggatcgaagg cgagggtgtc gtgtc
//
LOCUS       DATBNL010000418         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_94670, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000418 DATBNL010000000
VERSION     DATBNL010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94670"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VIC30_07340"
     CDS             <1..670
                     /locus_tag="VIC30_07340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY7804232.1"
                     /translation="KMTTNHAADKKSERTHRTALVIMAKVPIPGQVKTRLIPALGADG
                     ATELAEQLLNHTVTTAQKTQAFAHVELCISPSVDHPNLKAHGFALDITPQGDGDLGAR
                     MQRAFERLLRNHDAVVMIGTDAPDMTAALLDGAASELTQSDAVFAPALDGGYTLIGLA
                     KTHAQHLSRLFAGIPWSTGEVMTVTRDRLQSLATEVGLKWHEYPPMADIDEPEDLVRL
                     PRGW"
     gene            782..1627
                     /locus_tag="VIC30_07345"
     CDS             782..1627
                     /locus_tag="VIC30_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTAP family purine nucleoside phosphorylase"
                     /protein_id="HEY7804233.1"
                     /translation="MLAIVGGTGLYDLPGLEIKDRRSGDTPFGQASGDVLIGQIGQHD
                     ILFLARHGGGHRLLPHEINYRANVFALKAAGATMLLGFSAVGSLRMEIKPGDLVMPEQ
                     YIDWTKADRLRTFFGDGVAAHVSTAKPVSANLVQAVVAAGDRANQRVSRGATYICVAG
                     PRLGTQAESHWLRQMGGDLVGMTNVPEVFLAREAQIAYATLGMVTDYDCWLEDESQHV
                     SAMGIFELYGQTLTKARAVLDSLLAGDLPEPEVAIRQALSYAVLTQPEAMTPEQRQWF
                     DVLKR"
BASE COUNT          381 a          434 c          499 g          386 t
ORIGIN      
        1 taaaatgacc actaaccacg ctgctgacaa aaaaagcgaa cgcactcatc gaaccgcgct
       61 ggtcatcatg gccaaggttc ctatccctgg tcaggttaaa acccgcctga ttccggcgct
      121 tggcgccgac ggggcgacag aacttgcgga gcaattactt aaccacacgg ttaccaccgc
      181 tcaaaaaaca caagcgtttg cgcacgttga actgtgtatc tcaccatcag tggatcatcc
      241 aaatctcaag gctcatgggt ttgcgttaga tatcacgcct cagggcgacg gcgatttggg
      301 tgcgcgtatg cagcgcgcct ttgaacggtt gctacgcaac catgacgcgg tcgtcatgat
      361 tggcacagat gcaccggaca tgacagcagc gttgctagat ggtgccgcga gtgaattaac
      421 tcaatccgac gctgtgtttg cacctgcact agatggtggt tacaccctga ttggtttagc
      481 taaaacccac gctcaacact tgtctcgtct gtttgccggc ataccctgga gtactggcga
      541 ggtgatgaca gtgactcgag atcggttgca aagcctggcg accgaggtgg gtcttaagtg
      601 gcacgaatac ccgcccatgg ctgacatcga tgagcctgag gatttggtgc gattgcctag
      661 ggggtggtga gtgcgggttg gcaggtacgg gttgggaagt atgatcgata gtcgatatgt
      721 attgtttgaa gcgcttttgt gtactcgcgc gctgtaaaac gcagagctta aggagtggaa
      781 catgctggcc attgttggtg gaacgggttt gtacgactta cccggcttag aaatcaaaga
      841 ccgtcgctca ggcgacacgc catttgggca ggcctcaggc gatgtgctga tcggccagat
      901 tgggcaacat gacattttgt ttctggcccg tcatggtggt ggtcatcgtc tactgccaca
      961 tgagatcaat taccgagcga atgtatttgc actcaaagct gctggcgcca ccatgctgct
     1021 ggggttttct gcggttggaa gccttcgcat ggaaatcaaa cccggtgatc tggtgatgcc
     1081 cgagcaatac atcgattgga ccaaagcgga tcggctacgt acgttctttg gggatggggt
     1141 agcggcacac gtatcaacgg ccaaaccggt cagtgccaac cttgtgcaag ccgtggtggc
     1201 tgcgggtgat cgtgccaacc agcgggtaag ccgcggtgcc acatacattt gtgtggctgg
     1261 cccacgcctc ggcactcaag ccgagagcca ctggttgaga caaatgggcg gtgatctggt
     1321 tggcatgacc aacgtgcccg aggtgttctt agcccgagaa gcgcagatcg cctatgccac
     1381 gctcggcatg gttactgatt acgactgctg gttagaagac gagtcccagc acgtaagcgc
     1441 catgggaata tttgagcttt atggccaaac actgaccaaa gcacgcgctg tgctcgacag
     1501 tttgcttgct ggcgacttgc ccgaaccaga ggttgcgatt cgtcaggcac tgtcatacgc
     1561 ggtgctgacc caacccgagg cgatgacgcc tgaacaacgt caatggtttg atgtgctcaa
     1621 gcggtaggtg gtgtgtgatc aacacggctg cacaaagtcg tgcaagatca atccatcttc
     1681 gggcgtcacc gggtagtctc
//
LOCUS       DATBNL010000419         1562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_34841, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000419 DATBNL010000000
VERSION     DATBNL010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34841"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..813)
                     /locus_tag="VIC30_07350"
     CDS             complement(61..813)
                     /locus_tag="VIC30_07350"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEY7804234.1"
                     /translation="MKLLLDIGNSRIKLATLTDDGLVVYEPLAVTSDCHARLQQLITP
                     LADRLAACVASSVASQALNGAVEQVIAPLPIHWARSQREAGGIVNGYPDPTQLGVDRW
                     VSMLGLAHHFAQPHPPLVLASFGTATTIDTLSPENRFEGGLILPGITMMHQALARGTA
                     NLPESRGALDAFPTNTVSAISSGVVAAQVGAVARQMVFTSERFDQTPILCVTGGARDT
                     LMQALAASLPDHEIRELPHIVLEGLGVLATKI"
     gene            complement(831..>1562)
                     /locus_tag="VIC30_07355"
     CDS             complement(831..>1562)
                     /locus_tag="VIC30_07355"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEY7804235.1"
                     /translation="SNTNLLATLRKTSASESSPALLGAHHQTRGKGRLGRHWLDQPGQ
                     ALMFSCGFTLSVKNASSLASVGPALGINSRMAISEYLIEPAALCVKWPNDLMLGAAKV
                     AGLLTEAATKGDRLFVVIGMGLNLQGNSMLSTALKREVADIAPALQPDVRAQDLVIAL
                     ARAWQSTLETVQYQGFAPYHGVFTQHDYLAGQPARVLQQGNCVASGTVQGLDQQGRLL
                     VMTETGLAAFDVGDVSVSLTDSSIV"
BASE COUNT          350 a          433 c          431 g          348 t
ORIGIN      
        1 ttctcatgaa atcattgtag ccgcagttgc tgtgatgacg gatttggcta tgtgatgtgg
       61 ttatatttta gttgccagca ccccaaggcc ctcaaggacg atatgtggta attcgcggat
      121 ctcatggtct ggcaatgacg cagccagtgc ttgcatgagc gtgtcgcgcg caccaccggt
      181 gacacataag atgggtgttt ggtcaaaccg ctcgctagtg aataccatct gtcgagcaac
      241 cgcgcccact tgtgcagcca ccacgcctga ggagatggcg cttaccgtat tggttggaaa
      301 ggcatcgagt gcaccacggg actcgggcaa attcgctgtg ccacgcgcga gtgcctgatg
      361 catcatcgtg atgcccggca aaatcaaccc accttcaaaa cggttctcag gacttaaggt
      421 gtctattgtg gttgccgtcc caaaactagc tagcacgagc ggtgggtgcg gttgggcaaa
      481 gtgatgcgct aaaccaagca tcgataccca acggtcgacc ccaagttgtg tgggatctgg
      541 gtagccgttg acgataccac cggcctcacg ctgggatcgt gcccagtgga taggcaatgg
      601 cgcaattact tgttcgacag caccatttaa agcttggctg gccacgctgc tggccacgca
      661 ggccgccagt ctgtcggcca agggcgtaat gagctgctgc aaacgtgcgt ggcagtcgga
      721 agtaacagca agcggctcgt acacaaccag accgtcatct gtcagcgtgg ccaacttaat
      781 tcggctattg ccgatgtcta aaagtagttt cattaaacag tcgcgatcaa ttaaacgatc
      841 gatgagtcgg tcaaactcac cgagacatca cccacatcaa atgcggcaag cccggtttca
      901 gtcatcacca acaggcgccc ttgttggtca agtccttgca ccgtgccgct cgccacacaa
      961 ttaccctgct gcaaaacacg tgcgggttgc cccgcgaggt agtcgtgttg tgtgaagacc
     1021 ccatgatacg gcgcaaaccc ctgatactgc accgtttcaa gtgtcgattg ccaggcgcgc
     1081 gcgagcgcga tgaccaagtc ctgcgctcta acatcgggtt gtagagcagg ggcaatatca
     1141 gcgacctctc gttttaatgc tgtacttaac atcgaattgc cttgtagatt cagccccata
     1201 ccgatgacca cgaatagccg atcgcctttg gtggcggctt cagtcagtag gccagcgact
     1261 ttggctgccc cgagcatcag gtcattgggc cacttcacac acaatgcggc cggctcaatc
     1321 agatactcgc tgatagccat ccggctgttg atgccaagtg ccggccctac gctcgctagc
     1381 gatgaagcgt tcttgactga caaggtaaac ccgcaagaga acatcagcgc ttgaccgggt
     1441 tggtcaagcc agtgacgccc gagcctgcct ttaccccgtg tttggtgatg tgcaccaagc
     1501 aaggctggcg atgattcact ggcgcttgtc ttgcgcagtg tggctagcag gttggtgttg
     1561 ga
//
LOCUS       DATBNL010000420         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_44815, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000420 DATBNL010000000
VERSION     DATBNL010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44815"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VIC30_07360"
     CDS             <1..385
                     /locus_tag="VIC30_07360"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEY7804236.1"
                     /translation="IGSPIGSPIRASISRDDARAKALVTAAFSQGSLTLPLVLSGTDF
                     QRQVWRALLQIPLGETISYAQLASRVGKPGAARAVGSAVGANQIGFLVPCHRVVRQDG
                     VIGQFRWGSDVKQRLLEWESRLTHG"
     gene            378..1124
                     /gene="mtgA"
                     /locus_tag="VIC30_07365"
     CDS             378..1124
                     /gene="mtgA"
                     /locus_tag="VIC30_07365"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:TIGR02070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEY7804237.1"
                     /translation="MGKSSSRKLRKNKDRRSRRGVWGWAWRLFIWFVAAVLVYQAYLF
                     ASVLWYRWFDPQQTAFMADEKARLARLIPPRSIEQTWVPYDEISRYAKRAVISAEDTG
                     FVDHSGVEWEAIEQAARANFESGKIRRGGSTITMQVAKNLFLSPDRSYIRKAQELVLA
                     MMIELLWSKERILEVYLNVAEFGVGVFGIEAAAKHYFGVPASRLNPRQAAWLASILPA
                     PKRYDVQRRSSWIERKTGIIMRRMPQVQIP"
     gene            1308..1487
                     /locus_tag="VIC30_07370"
     CDS             1308..1487
                     /locus_tag="VIC30_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804238.1"
                     /translation="MTAFTQAGTMINPELLGLRDKADRQRAHKGPTLKGDIALVAFWA
                     ALVPGLMWFGAMVGF"
BASE COUNT          321 a          378 c          458 g          375 t
ORIGIN      
        1 gatagggtcg cctatagggt cgccgatcag ggcttcgatt tctcgcgatg atgccagagc
       61 caaggcgctt gtgacagcgg cgtttagcca gggttcactg acattaccct tggtgctaag
      121 cggcacggac tttcagcgcc aagtctggcg cgcacttttg caaatcccat tgggtgagac
      181 gatttcctat gcacagctcg cgagcagggt gggcaaaccg ggggcggcac gtgcggttgg
      241 tagtgcggta ggtgctaacc agatcgggtt tttagtgcca tgtcatcggg tagtccgtca
      301 agacggcgtg attggtcaat tccgctgggg tagtgacgtt aaacagcgct tgcttgaatg
      361 ggaatctcgt ctgacgcatg ggtaagtcct cgtcacgaaa actgcgcaaa aacaaggacc
      421 gacgctcgcg ccgcggtgtc tggggctggg catggcggtt gttcatctgg ttcgtggcag
      481 ccgtgctggt ctaccaagct tatctgtttg ccagtgttct ctggtatcgg tggttcgatc
      541 cgcagcaaac cgcttttatg gccgatgaga aagcgcgttt ggctcggctg attcccccgc
      601 gcagtattga acagacttgg gtaccctatg acgagatatc gcgctacgcc aagcgggctg
      661 tgatcagcgc cgaagataca gggtttgtag atcatagcgg tgttgagtgg gaagcgattg
      721 agcaggccgc gcgagctaat tttgagtcgg gaaagatacg tcgtggtggg tcaacgatca
      781 ccatgcaggt agctaaaaac ctattcttgt cacctgaccg tagctatatc cgcaaggctc
      841 aagagctggt tcttgccatg atgattgaac tgctctggag caaggagcgc atccttgagg
      901 tgtatttgaa tgtcgctgag ttcggtgttg gtgtgttcgg catagaggca gcggctaagc
      961 actattttgg ggtgccggct agccgcctga atccgcgcca ggcggcatgg ttggcttcaa
     1021 ttctgccagc acctaaacgc tatgatgtcc agcgtcgatc gagctggatc gagcgcaaga
     1081 ccggcatcat catgcgccgc atgccgcagg tgcagattcc ttgactgctg atgcagaacc
     1141 tggttgctgg cgctgtaagc gatgtatttc tgtgttgatt tcgccacagt gatcgattag
     1201 cagaatactg ttgttgcata cagtactgtt ttgatataca gtgttctcat gtaagcgata
     1261 aaccgagtcg ttttacaaca cggcttaaca tcactgaggc actaaccatg acagcattta
     1321 ctcaagccgg caccatgatt aaccccgaat tgcttggcct gcgcgacaaa gccgaccgcc
     1381 aacgcgctca caagggtcct acgctcaaag gtgacattgc gttggtcgcc ttttgggctg
     1441 cccttgtgcc tggcctgatg tggtttggcg ctatggtggg gttctaaacc aaacccaaga
     1501 taggcggacc aacagcgctg ttcgcccaag tg
//
LOCUS       DATBNL010000421         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_24858, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000421 DATBNL010000000
VERSION     DATBNL010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24858"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /gene="ybgF"
                     /locus_tag="VIC30_07375"
     CDS             complement(<1..630)
                     /gene="ybgF"
                     /locus_tag="VIC30_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HEY7804239.1"
                     /translation="MRHSKILSVIATSIAVWSVPTSAIAFTDSEAREAIVELRQQVRT
                     LTETSQRATLQLAQRIDMLEQEITRLRAQIEELGGPTNMSAGSGGQAQVQAQDSKEQA
                     AFDGAMDLYRDGDIAGAQESLSAFLTLYPESVLAPTAQFYLGSSYYANKKYRDAISVL
                     NIMAAKFPEHPRAPDALLVVAGSEFELNERSAAKSTLQKIVSDYPDSAAA"
     gene            complement(651..1157)
                     /gene="pal"
                     /locus_tag="VIC30_07380"
     CDS             complement(651..1157)
                     /gene="pal"
                     /locus_tag="VIC30_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEY7804240.1"
                     /translation="MNLRLVKSFSVIGFTLTLAACSSVSLDDSASGGAGASDGMGGAS
                     ASGVMDPFNPNSVLATDRSVYFEFNSYTVDTQYGPLVETHAQYLTNNPEQQILIEGNT
                     DARGGAEYNLALGNRRAEAVRRMMTLIGARDAQIETISFGKEKPKALGDTEADYAENR
                     RADIVYLR"
     gene            complement(1202..>1711)
                     /locus_tag="VIC30_07385"
     CDS             complement(1202..>1711)
                     /locus_tag="VIC30_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HEY7804241.1"
                     /translation="GLSQIYLVNAADGSNLRRLTRSPLIDTEPVFSPDGKSIFFTSDR
                     SGKPQIYQIPVTGGEARRVTFNGDYNISPRISPDGQNLLVVTRRDGQFRIAMIDLATG
                     NETLLTDGPDDQSPSFAPNGKQVLYAAKQGGRNMLAGVSSDGRMRQTLSILNGEIREP
                     TWGPYGQTP"
BASE COUNT          390 a          429 c          457 g          435 t
ORIGIN      
        1 tgcagcagct gaatcggggt aatcgctgac aattttttgc aaggttgatt ttgcggccga
       61 tcgctcattt agttcgaact cgctgcctgc aaccacaagc agcgcatcgg gcgcccttgg
      121 atgttcagga aactttgctg ccatgatgtt gagcacggaa atcgcatcgc ggtatttttt
      181 gttggcgtag taagagctac cgagatagaa ctgtgccgtg ggcgccagga cactttcggg
      241 atagagcgtg agaaacgccg aaagggactc ttgggcacca gcgatgtcgc cgtctcgata
      301 taagtccatg gcaccatcga acgcggcctg ttccttactg tcttgggctt gaacttgcgc
      361 ctgaccaccc gatccagcac tcatattagt gggtccgcca agctcttcga tttgcgctcg
      421 caagcgagtg atctcttgct cgagcatatc aatgcgttgt gccagttgca acgtggccct
      481 ttggcttgtc tccgttagtg ttcgaacctg ttgacgcaac tcgacgatgg cttcacgggc
      541 ttcactgtcg gtaaatgcaa ttgcggatgt tggcactgac cacaccgcaa ttgaggtggc
      601 aatgacggac aatattttgc tatgtcgcat aagacgactc tcccggctat ttatctcaag
      661 tagacgatat cggcacgtcg gttttcagca tagtcagctt cggtgtcgcc aagtgctttt
      721 ggtttttctt taccgaaact gatcgtttca atttgtgcgt ctcgcgcgcc gataagtgtc
      781 atcatgcggc gaacggcttc agcacggcga ttgcccagcg caaggttgta ttcagcacca
      841 cccctggcat cggtgttgcc ctcaatcaag atttgctgct caggattgtt ggtcagatat
      901 tgcgcatgtg tttctactag cggaccgtac tgggtatcga cggtataact gttgaattca
      961 aagtaaaccg atcggtctgt ggcaagcacg ctgtttggat taaaaggatc catcacaccg
     1021 cttgccgagg cgccgcccat gccgtcagag gcacctgcac cgccagaggc cgagtcatca
     1081 agcgagactg agctacatgc ggcgagagtc agggtaaaac cgatgacaga aaaggattta
     1141 actaggcgca ggttcatttg aattcctttg tagagcagtt gtcagagcta ctgagtaaag
     1201 atcaaggcgt ttggccataa ggaccccaag tgggttcgcg aatttcacca ttcaggatcg
     1261 atagggtctg acgcatacga ccatcactcg atacaccagc taacatatta cgccctcctt
     1321 gcttggctgc atacaagact tgcttaccgt taggtgcaaa gcttggcgat tgatcatctg
     1381 gaccgtcggt taacaaagtc tcgttgccag ttgccaaatc aatcatggca attcggaact
     1441 ggccatcacg gcgggtcacc accagcaggt tttgtccatc gggtgagata cgtggcgaga
     1501 tgttgtagtc accattaaat gtgacacgac gggcctctcc gccggtcacc gggatttgat
     1561 agatctgcgg cttgccggat cggtcactgg taaagaaaat ggattttcca tcggggctga
     1621 acacgggttc ggtatcaatc aaaggcgatc gtgttagccg acgcaagttt gatccgtctg
     1681 ctgcgttgac cagataaatt tgtgacaaac c
//
LOCUS       DATBNL010000422         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_44843, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000422 DATBNL010000000
VERSION     DATBNL010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44843"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VIC30_07390"
     CDS             complement(<1..414)
                     /locus_tag="VIC30_07390"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY7804242.1"
                     /translation="MALLATDDQVSYFGYHIPYLEHLGVEPVQCQNDIAITRLPIKPH
                     LVNSRGHVHGGALMSVLDFTLSAAGRAHDLTGITMATIDMSTSFMSPGSTDLTITATC
                     THRGGSICFCEGEVRDAHQKLVAKASASFKMLKVDR"
     gene            complement(519..998)
                     /locus_tag="VIC30_07395"
     CDS             complement(519..998)
                     /locus_tag="VIC30_07395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804243.1"
                     /translation="MQTEPAQVSTDESGVRSTSGRSVSRRLLSLSVALLLAGCAGVNS
                     DSSPAQTFEVDVPVKTAYERALAQTKMCLVTKDDFPLTSQIDADEAFAFVRVNMTLTD
                     KLLSNVRIVAQSPSRSRVSVQMWGVDVWDMSAVDAMQAAIEFGVPSCVNYFPSTPKQ"
     gene            1093..1476
                     /locus_tag="VIC30_07400"
     CDS             1093..1476
                     /locus_tag="VIC30_07400"
                     /inference="COORDINATES: protein motif:HMM:NF016156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEY7804244.1"
                     /translation="MNFNANSVWILVCGLLGALGVALGAVAAHALADPQAALSVERAS
                     NYQLFHTVAILALLSLKGRLVTLSRWLMLAGIVGFSGAIYAKYLLGLPALGALAPVGG
                     SLLILSWLVLGASVFTDRQAAKSES"
     gene            complement(1500..>2432)
                     /locus_tag="VIC30_07405"
     CDS             complement(1500..>2432)
                     /locus_tag="VIC30_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY7804245.1"
                     /translation="DIVVENYKVGTLKRYGLDYESLSALNPRLVYCSITGFGQTGPYA
                     PLPGYDFVFQGMSGLMSLTGKPDSEPGGGPMKYGVAITDLTTGLYATYAILAAIEHRH
                     VSGKGQHIDLSLLDCGVSLTSYMSMNYFLSGKVPQRVGNVHANIVPYQVFRCKEGDII
                     MAVGNATQFADMCRAIGHPEFAEDDRFKRNFDRVRNRVELEQLLQEPLMQRGMLEWVE
                     IFERHNVPCGPIYTLDQVFEDVQVKHRGLKTELTHDSGVVVPSVDSPVRLSDTPVNLT
                     ASAPSLGSANETVLKQDLGLTDEQIQGLKNKGII"
BASE COUNT          563 a          656 c          620 g          593 t
ORIGIN      
        1 acgatctacc ttaagcattt tgaaagaagc actggccttg gctacaagct tttgatgagc
       61 atcacgcacc tcaccctcac aaaaacaaat cgagccgcca cggtgcgtac aggtggcagt
      121 aatcgtcaag tctgtcgagc ctggggacat aaagctcgtg gacatgtcga tggtggccat
      181 ggtgatgccg gttaggtcgt gcgcgcgtcc ggcagctgac aaggtaaagt ccagcacgct
      241 cattagcgcc ccaccgtgca catgcccccg actgttgacc aagtggggct tgatgggcaa
      301 gcgggtgatg gcaatgtcgt tttgacattg aacaggctca acgcctaagt gttcaagata
      361 tggaatatgg taaccaaaat agctgacttg atcatcggtt gcgagcagtg ccatgggtgt
      421 ggaagtttcc taagataaaa gtgatgtgtt ttgttaatga tggttatagg gtgctgggct
      481 tatgccctgc actattgatc tttggtctaa agcatgtctt actgcttggg cgttgacgga
      541 aaataattca cgcagcttgg cacaccaaac tcaatggccg cctgcatcgc atcaaccgcg
      601 ctcatgtccc agacatcgac gccccacatc tgcacgctca cgcgcgagcg tgatggtgac
      661 tgagcaacga tgcgcacgtt cgacaacagc ttgtcggtca aggtcatgtt cacccgcaca
      721 aaggcaaacg cctcatcggc gtcgatttga gacgtcagcg ggaaatcatc cttcgtcacc
      781 agacacatct tggtttgagc tagcgcgcgt tcgtaggcgg ttttaaccgg cacatcgact
      841 tcaaaggttt gggctggcga actatctgaa ttgacgccgg cacagccagc gagcaataga
      901 gccacactca aacttagtag ccgccgagaa actgatcgtc ccgatgtcga tcgcacaccg
      961 gattcatcag ttgatacttg cgctggttct gtctgcatgt aaattccttg tcaactcaaa
     1021 gccgagcgta agccctattt gattctatct aaatcaaatc atccaacggc atgccatgct
     1081 acgcttgccg ccatgaactt taacgctaat tccgtctgga tactcgtttg tggcttactc
     1141 ggcgcactgg gcgtggcttt gggtgcggtt gccgctcatg ccttggctga tccacaagca
     1201 gcactatcag ttgagcgagc ctcaaattat caactgtttc acacagtcgc tattttagcg
     1261 ctcctgtcct taaaggggcg tctggttacc ttgtcgcgct ggctgatgct agcaggcatt
     1321 gtcgggttta gcggcgccat ctatgccaaa tacctgcttg gactgcccgc gttaggggct
     1381 ctagcccctg tgggcggcag tctgttgatc ctgtcatggc tggtgcttgg cgcaagcgtc
     1441 ttcaccgatc gccaagccgc caaatctgag tcatagctcg ccacgagtca gctgacagct
     1501 cagataatcc ccttgttttt taaaccctgt atttgctcat cagtcaggcc aagatcctgt
     1561 ttaagcaccg tttcgttcgc gctaccaagt gatggtgctg aagcggttaa gttcactggc
     1621 gtgtcagata accgaacggg gctatcgaca ctaggtacga ctacaccact gtcgtgagtt
     1681 aattcggttt taaggccacg gtgcttgact tgtacgtcct caaacacctg gtctagtgta
     1741 tagatgggac cgcacggtac gttgtgacgc tcaaatattt ccacccactc gagcatgccg
     1801 cgctgcatta agggctcttg gagcagttgc tccaactcaa cgcgatttct gacccgatca
     1861 aaatttcgtt taaatcgatc atcttcggca aattctggat gaccaatggc tcgacacata
     1921 tcagcgaact gggtggcgtt accaactgcc atgatgatat cgccctcttt gcagcgaaac
     1981 acctgataag gcacgatgtt ggcatggacg ttaccaacgc gctgggggac tttgcccgac
     2041 agaaagtaat tcatcgacat gtaggacgtc agcgacaccc cacaatcaag caacgacaga
     2101 tcaatgtgct ggcccttgcc actgacgtgg cgatgctcga tggccgccag aatcgcatat
     2161 gtagcgtaga ggcccgtggt gagatctgtg atggcaacgc catacttcat gggaccgcca
     2221 cctggctcac tgtcgggttt acctgtcagg ctcatcagac cactcatgcc ctgaaacaca
     2281 aaatcgtatc ccggcagtgg cgcatagggt cccgtttgac cgaaccccgt gatcgagcaa
     2341 tacaccaagc gcggattcag agcgcttaag ctctcgtagt ccaacccata acgttttagt
     2401 gtgccaactt tgtagttctc gaccacgatg tc
//
LOCUS       DATBNL010000423         2988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_34915, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000423 DATBNL010000000
VERSION     DATBNL010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34915"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            279..2627
                     /locus_tag="VIC30_07410"
     CDS             279..2627
                     /locus_tag="VIC30_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HEY7804246.1"
                     /translation="MSEISFTPRQADDVRFRIQSQLAGELSIKPQQVATTMQLMADGA
                     TVPFIARYRKEATGGLDDTVLRQLEVRLLYLQELEARRDVVTGSIAEQGKLTETLLQA
                     INEADTKQRLEDLYAPFKPKRRTRAQIAREAGLQPLADLLLSDATSVPQEAAAAFVDA
                     DKGVADVKAALDGARDILAEQFAENADLVASLRAHLMRHGLLYAKVVEGKEQEGANFR
                     DWFDFNESVATIPSHRMLALLRGRQQGVLDLRIGLDAEQEAMVPHPCTQRIAEFLGFG
                     QAVFGAQASAREQWLAEACRWCWRVKLLMFFEMEIIGVLRERAETQAIDVFAKNLKDL
                     LLSPPAGAKAVMGLDPGIRTGVKVAVIDKTGKVVDTATIYPFEPRRDIEGSLRTLAEL
                     AKRHHIELVAIGNGTASRETDKLVAALCQAHPELNLSRVTVSEAGASVYSASELAALE
                     FPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVNQRQLATSLTAVIEDC
                     VNAVGVDVNTASAALLANVSGLNSGLAKNIVSYRDIHGRFGSRQDLMAVPRFGDKAFE
                     QAAGFLRITDGQNPLDASAVHPEAYPVVERILKQIQADIKTLMGNRQALAGVSASQFT
                     DERFGLPTVKDILSELEKPGRDPRPAFEPVQFDDSIQTMNDLKPGQVLDGVVTNVANF
                     GAFVDIGVHQDGLVHISALSSQFVKDPRDVVRTGQAVKVKVLEVDMARKRIALSMRLD
                     DEPGERSSSTAPSSRSKAPRNTDDRQKAPDGAMAEAFAKLRG"
     gene            complement(2817..>2988)
                     /locus_tag="VIC30_07415"
     CDS             complement(2817..>2988)
                     /locus_tag="VIC30_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013589448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEY7804247.1"
                     /translation="YKGNVYTVARDSADTLFDQTIATFDDDGGAYDQADAAGFIKLNA
                     LRLRIEAKKGRV"
BASE COUNT          665 a          770 c          852 g          701 t
ORIGIN      
        1 ccagctaagc ctgctgccag taataaaagt ccaattgtgg tgcgtatttt cattagcctt
       61 gttagccagt tcttgttttg actgtcgcca gcccttagtt tcagtctctc agccccgtat
      121 cagaaggtcc ttaagagtag gtactttcaa tgccatctga ccatcctatt ttcatgttac
      181 tgcggtcgtt ctagggcttg tgtggaactt agaagagcct tttcacgggc tgttgctgct
      241 tgtggcaaaa tgcatcgatt ccacttaacg ttgcatttat gtccgagatt tcatttacac
      301 cccgtcaagc cgatgatgtg cgttttcgta tccaaagcca attagccggc gaactatcca
      361 tcaagcccca gcaagttgcc accaccatgc agttaatggc tgatggggcc acggtgccgt
      421 tcatcgcgcg ttatcgcaaa gaagccacgg gcggtttgga cgacacggtt ttaagacaac
      481 tcgaagtgcg actgctttac ctgcaggaac ttgaggcgcg ccgcgatgtg gtcacgggct
      541 ccattgccga acagggcaag ctcaccgaga cactgctgca ggccattaac gaggcggata
      601 ccaagcaacg gttagaagat ttgtacgccc cgtttaagcc caagcgtcgc acccgtgcac
      661 agatcgcacg tgaggcgggc ttgcagccgc tggcagactt gttgttgtct gacgcgacca
      721 gcgtgcccca agaggcggct gcggcgttcg tagatgccga caaaggggtg gccgatgtca
      781 aggcggcgct agacggtgca cgcgacatat tggctgagca gtttgctgag aacgccgact
      841 tggtcgcgag tctacgcgcg catttgatgc gtcacgggct gttgtatgcc aaagttgttg
      901 aaggcaaaga gcaagagggt gccaatttca gggactggtt tgatttcaac gagtcggtag
      961 cgacgattcc ctcgcaccgc atgttggctt tgttgcgcgg tcgccaacaa ggcgtgctcg
     1021 accttcgcat tggattggat gccgagcaag aggctatggt gccgcatccg tgtacacagc
     1081 gcattgccga gtttcttggc tttggccaag cggtatttgg tgcccaagcc agtgcgcgcg
     1141 agcagtggct ggctgaagcc tgccgttggt gctggcgtgt gaaattgctg atgttttttg
     1201 agatggaaat cattggggta ttgcgtgaac gtgcagaaac ccaagccatt gacgtatttg
     1261 ccaagaactt gaaggacttg ttgttatctc ccccggccgg cgccaaagcg gtcatgggtt
     1321 tagaccccgg gattcgcacg ggcgttaaag tcgctgttat cgacaagact ggcaaagtgg
     1381 tcgacacagc caccatctac ccatttgagc cgcgccgaga tatcgagggc agtttgcgca
     1441 ccttggctga attggccaaa cgccatcaca ttgagctagt ggccattggc aatggcacag
     1501 cctcgcgcga aacggacaaa ttggtggccg cactgtgtca ggcacatccc gaactcaact
     1561 tgagtcgggt tactgtctca gaagcgggtg catcggtgta ttcagcatct gagctcgccg
     1621 cattggagtt tcccgatctg gatgtgagcc tgcgaggtgc cgtttcaatt gccagacgat
     1681 tgcaagaccc cttggcagag ctcgtcaaga tcgaacccaa gtctatcggc gttgggcagt
     1741 atcagcacga cgttaatcaa cgtcaacttg ccacctcttt gaccgcggtc atcgaagatt
     1801 gtgtgaatgc ggtgggtgtt gatgtcaaca ccgcctcggc ggccttattg gcaaatgtct
     1861 caggtcttaa ctcgggacta gccaaaaaca tcgtcagcta tcgagacatc cacgggcgat
     1921 ttggttcacg ccaagatctg atggcggtgc cacgctttgg tgacaaggcg tttgagcaag
     1981 cggcaggttt tttacgcatc accgatgggc agaatccgct tgatgcatct gccgtgcatc
     2041 cggaagccta tccggtcgta gaacggatct taaagcagat acaagccgac attaaaactt
     2101 tgatgggcaa tcgtcaggcg cttgctggcg tgtctgcttc acagtttacc gatgagcgtt
     2161 ttgggttacc gacggtaaaa gatattttgt cggaactaga aaaaccgggc cgggatccgc
     2221 gcccagcatt tgagccggtg cagtttgatg acagcattca aaccatgaat gatctcaagc
     2281 cggggcaggt gctagatggc gtcgttacca acgtggccaa tttcggggcg tttgttgata
     2341 ttggtgtgca ccaggacgga ttggtgcata tctcggcact gtcatcacag tttgtcaaag
     2401 acccgcgcga tgtggttcgc accggacaag ccgtcaaagt taaggtgcta gaggttgata
     2461 tggcacgcaa acgcatcgcg ctgagcatgc gtctagacga tgaaccaggt gaacgttcat
     2521 catcgactgc accatcatcg cgctcaaagg cgccccgtaa taccgatgac cgccaaaaag
     2581 cacctgacgg cgccatggca gaggcatttg ccaagctgcg cggctaggag cagaggttat
     2641 acgggtcagg ggtcaggact tgtagcggcc agtggtgctc aggttcgctc aggtgcgaaa
     2701 tggccaaggg ccggatcgcc agaaaaaagc ccgatacgca caagaccgcg tatcgggctt
     2761 tttagaagcc ctttaaggcc agaaacgacc aagcctaggt gtgaccctta atcgctttaa
     2821 acgcgtcctt tcttggcctc gatgcgcagt ctgagcgcat tgagtttgat aaaccctgcc
     2881 gcatcggctt ggtcgtacgc gccgccgtca tcatcgaatg tggcgatcgt ttgatcaaac
     2941 agggtatcag cactgtcgcg tgccaccgtg tagacattac ccttgtaa
//
LOCUS       DATBNL010000424         2062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174151, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000424 DATBNL010000000
VERSION     DATBNL010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174151"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VIC30_07420"
     CDS             complement(<1..241)
                     /locus_tag="VIC30_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY7804248.1"
                     /translation="MRVIEIKEPGGPEALVVGERPMPEPGPGEVLIKVAAAGINRPDV
                     FQRMGNYAPPPGASDIPGLEIAGEIVSGAVQGSAFS"
     gene            368..457
                     /locus_tag="VIC30_07425"
     tRNA            368..457
                     /locus_tag="VIC30_07425"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:402..404,aa:Ser,seq:tga)
     gene            complement(529..675)
                     /locus_tag="VIC30_07430"
                     /pseudo
     CDS             complement(529..675)
                     /locus_tag="VIC30_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011213396.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            808..1986
                     /locus_tag="VIC30_07435"
     CDS             808..1986
                     /locus_tag="VIC30_07435"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804249.1"
                     /translation="MYQSRTINAVLRQALAGFPAILLTGPRQSGKTTLLRHEAGDDVA
                     YVTFDDPIERDFASADPQGFLRQFAHQPVILDEIQYVPSLLSHIKMHIDREPDRCGRW
                     LLTGAQQFGLMKDVSESLAGRIAILELPPFSQIECPRNDLAQTLWDGSYPIPALFPDR
                     RDLWVTSYISTYIERDVRQIRNIPDLRVFNQFLIRMAARHGRVFSQAEISREIGVSLP
                     TVKSWARVLEASYVAHMLAPWFQNYGKRISKTPKCYFYDSALANALTRQPHAQSALAG
                     PMGGALLEGWVITEAAKVFMSLGKKPELYFWRSHDGLEVDLLISIAGKLHPVEIKLTS
                     TPTRGHLGPLNRFIELAGQDAAEHGTLVCQTETLKTLPGGHTAMPWQTFTQWLFDLLR
                     "
BASE COUNT          505 a          550 c          498 g          509 t
ORIGIN      
        1 tgctaaaggc ggaaccttgc accgcccccg aaacaatttc accggcgatc tctagccccg
       61 gaatatcaga ggcacctggc ggcggcgcgt aattgcccat tcgttgaaac acatcgggac
      121 ggttaatgcc cgcggctgcg actttaatca gtacttcgcc gggccctggc tcaggcatcg
      181 gtcgttcgcc aacgaccaaa gcttctggtc cgcctggttc tttaatctcg atcacgcgca
      241 tggtatttgc ccccttaagt ggtcagtatt gattcgcgaa atggtttatt atgctgcctt
      301 ggcgttcttg atcaaaggac gtcttctagc aaaaactgat aaagaagcaa gaagcaagaa
      361 gcaagaagga agcgtggcag agcggttgaa tgcaccggtc ttgaaaaccg gcgagggttt
      421 gcgccctccg tgagttcgaa tctcaccgct tccgccagtc ttgctgatgc caaaacggtg
      481 agagcagggc tctacggctc taccccatta aggggggatg cgcattcatc acactctatt
      541 gatcacacca ctccatccgc atagagccaa gactctcaga cggtaattct caaagtttct
      601 aaatccaaat gcgcggcacg agatcatttc tatctttgcg tggaaaccca tggtagtacc
      661 gtcggatttt gagaatccct gtatcgatta ggtcgtgaac tgaacagacg atttcgaaaa
      721 aacctgctaa aagcagcaaa atgagcgaat aaaatccatt taaatcaata ttttgacaat
      781 tgtaaattct gattttatga tttcaatatg tatcaatcac gcacaatcaa tgcagtgctg
      841 cgtcaggctc tggccggttt tcctgccata ttgctcacgg gccctcgcca atccggaaag
      901 acaaccctcc tgcgccatga ggcaggtgac gacgtcgcct acgtgacctt tgatgatccg
      961 attgaacggg atttcgctag cgctgatccg caagggttct tgcgtcaatt tgcgcaccaa
     1021 cccgtcatcc ttgatgagat ccagtatgta ccgagtctgc tctcccacat caaaatgcac
     1081 attgatcgcg aaccagatcg ctgcggtcgt tggcttttaa cgggtgcaca gcaattcgga
     1141 ctcatgaaag atgtcagcga atctttagcc ggtcgcattg caattcttga gctgccacct
     1201 tttagtcaaa tcgagtgtcc acgcaatgat ttggcacaga cactctggga cggtagctac
     1261 cctattccag cgctgtttcc cgaccgtcga gatttgtggg tcactagcta catcagcact
     1321 tatatagagc gtgatgtgcg gcaaattcga aacattcctg atttgcgtgt ctttaaccaa
     1381 tttcttatac ggatggccgc gcgccatggt cgggtgttca gccaggcaga gatatcgaga
     1441 gagatcggtg tgtcgttacc cactgttaag tcttgggcca gggtactcga ggcttcttac
     1501 gttgcccaca tgctggcacc ttggtttcag aactacggca aacgtatctc taaaacacca
     1561 aagtgctatt tctatgactc agccctggcc aatgcattga cacgacagcc tcatgcccag
     1621 tctgctttgg ctggcccgat gggcggagcc ctactcgagg gttgggtcat cactgaagcg
     1681 gccaaagtat ttatgtcgct aggaaaaaag cccgagcttt atttttggcg ttcccacgac
     1741 ggtttggaag tggacttgct aatttcaata gccggcaaac tacaccccgt ggaaatcaag
     1801 ttaacgagca caccaactcg ggggcatctg ggtcctctga accgctttat tgagctcgcc
     1861 ggtcaagacg ctgccgaaca cggtacgttg gtttgccaga cagagacact aaaaacgctg
     1921 ccaggcggac acaccgccat gccttggcag actttcacac aatggctctt tgatctgctt
     1981 cggtagtcct gtttaatcag agatcgcccg catctggctg atcaaatccg acttaccctc
     2041 aaacccgata ccgggcaaat ca
//
LOCUS       DATBNL010000425         3797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74961, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000425 DATBNL010000000
VERSION     DATBNL010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74961"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1332
                     /locus_tag="VIC30_07440"
     CDS             <1..1332
                     /locus_tag="VIC30_07440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY7804250.1"
                     /translation="RSWLSIKSRSWMTRAGLLAAGGLISLGLAGCGDKPKPPQQPPPK
                     VTAATPAKQTVQNYVTFDGTAEPLLYANLEARVPGYLEQILFQDGAKVKKGDLLFVIE
                     QDQYQEEVALNQAIYNEAQIEFDRQSTLLEQKATSQAAVDSARSKLQQAQANLALAKI
                     NLGYTEVRAPFDGVMGRHLIDVGNYLGTSPDGIKLAEIRQIQPLYVYFSMSETELLDY
                     LRMVRQPGANDLAGLSTIAAGVGKLPVYAALQGEKGYPHTGVLDFAASDLSSDTGTLQ
                     LRAQFPNTTADIVPGVYARVLVFYGKKRESLLVPFSATMRDQLGNYVYVLDADKKAQR
                     QDVTLGQQFGALVEVTKGLKDTDKVVIDGFVTLSAGLVTDPKDGEIKPAVLPGQQPSS
                     QSADKSSDQSSDSSSGKPSTQSTTESTTESTSKSSGQSSGKSASQSSNQGS"
     gene            1439..>3797
                     /locus_tag="VIC30_07445"
     CDS             1439..>3797
                     /locus_tag="VIC30_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7804251.1"
                     /translation="MISATFIKRPILSNVIGIIIVLIGAVSIFGLPVAQYPPMTPPTI
                     QVSTSWPGANAKLIQQLVASNIENQVNGVQNMLYMQSYSTDAGTYSLTVTFETGTDPD
                     MAQVDVQNRVAIALPMLPTAVQAQGVTTKSQPSDILQFVTVTSKDNSRDALFLSNFAN
                     LQMQQRLARIPGVAAANVFGVGNYSMRVWLDPEQMKARNLSPSEVMSAINSQNVLLSA
                     GQIGAPPVPKGQAFQFTVNVNSAMDTPEQFGQIVLKEANGQLTRLRDVARIEMGSQNY
                     SQFFGLNDKPAGGIAIYQLPEANALQVAQAVRDEMDKISKTFPSDIQWEIPYDSTVFV
                     SSSIDEGYSTLYEAGLLVLLVILIFLQNWRITLVPAVTIPVTIIGAFAGMAALGFSIN
                     LLTLFAIVVVIGIVVDDSIVVVEAVAKNVEKGMKPKAAAMEAMRELMGPIIGITLVLM
                     AVFLPASFISGITGQMYRQFALVIAITALLSGIAAISLSPAQSGEFIKPIDPNAKKKQ
                     KNWFSRGFDKGFGAIASTYAKMMHSLVKHSTITALVGLAIIAASVYGFTKVPTGFIPN
                     EDQGYLMTTVTLPSGASLERTQAAMDAVRAAAQKIDGVDQVVSIGGVSLLDSFSPDPS
                     AGGMFITLKPWDERSKAKGTDLRSIYMNLTKAFHDIESAATQVILPPAIPGLGMSGGF
                     NLQLILTDGSNSFEKLQAATDDFLARAMKLPEVQVAFSSFNNNVPQLELTFNPARAET
                     LGVSIGDAYDVLQTYLGSSYVNQFFKFGQTYQVYVQADGQYRTDIN"
BASE COUNT          857 a          988 c         1037 g          915 t
ORIGIN      
        1 cgttcttggt taagtatcaa gtcccgttca tggatgaccc gtgccggttt gttggccgct
       61 ggcggcctga tcagcctcgg tttggcaggt tgtggtgaca agcccaagcc gccccagcaa
      121 cctccaccca aagtgaccgc ggccaccccg gccaaacaaa ccgtgcagaa ctacgttacg
      181 tttgacggca cggctgagcc attgctttat gccaaccttg aggcgcgtgt gccgggttac
      241 ttagagcaga tcctgtttca agatggcgcc aaggttaaga aaggtgactt gctgttcgtc
      301 atcgagcaag atcagtacca agaagaagtg gctttaaacc aagcgattta caacgaagct
      361 cagattgagt ttgaccgtca gtcaacattg ttagagcaaa aagcgacttc tcaggctgcc
      421 gttgacagtg cccgctcgaa gttgcaacaa gcacaagcca atctggcgct cgcaaaaatc
      481 aatctcggct acaccgaagt gcgtgcgccg tttgatggtg tgatgggtcg ccacctgatt
      541 gatgttggta actatctggg tacaagcccc gatggcatca agttagctga aattcgtcag
      601 atccaaccgc tgtatgtcta cttctccatg agtgaaaccg agctgctcga ttacctgcgc
      661 atggtgcgtc agcctggtgc taacgacctc gcaggtttga gcacgattgc agcgggtgtc
      721 ggtaagttac ctgtgtatgc cgcgcttcaa ggtgagaagg ggtatccaca cactggcgtg
      781 ctggattttg cggcgagtga cctgagctct gacactggta ccttgcagtt gcgtgcccag
      841 tttccgaaca ccactgccga tatcgtgccg ggtgtctatg cccgagtgct ggttttttac
      901 ggcaaaaagc gtgagtcgtt gctggtgcct tttagcgcca ccatgcgtga ccagctcggc
      961 aactacgtct acgtccttga tgccgacaaa aaagcccaac gtcaggacgt caccttaggc
     1021 caacagtttg gtgccttggt cgaagtcacc aaaggcctga aagacaccga caaggtggtc
     1081 atcgatggtt ttgtgacgct tagcgcaggc ttggtcacag atcccaagga cggtgagatc
     1141 aagccggcgg tgttgcccgg acagcagccc tcaagtcaat ctgcggataa atcctcagac
     1201 caatcctcgg atagttcctc aggtaagcca tcaactcagt caacaactga gtcaacaact
     1261 gagtcaacca gcaagtcctc gggtcagtca tcaggcaagt cagcgtctca gtcctctaac
     1321 caaggttctt gataggcatt ggcgagtttt actcgccaat gcctctttaa tgccgcttta
     1381 atgcttcttt aaagcctttc ttattacagc gcctcgttaa gccacacgga ttcgccacat
     1441 gatttcagcg acctttatta aacgcccgat tctcagtaac gtgatcggta tcatcattgt
     1501 gttgattggc gcggtatcga tttttgggtt gccggtggcg cagtatccac ccatgacgcc
     1561 accgaccatt caggtctcta ccagttggcc aggggcaaac gccaagctga ttcagcaact
     1621 tgtggccagc aacatcgaga accaggtcaa cggcgtgcag aacatgcttt atatgcagtc
     1681 gtactccacg gatgctggta cctattctct gaccgtgacg tttgaaactg gcacggatcc
     1741 tgacatggcg caagtcgatg tgcaaaaccg cgtggcgatt gccttgccta tgttacccac
     1801 ggcggtgcaa gcccagggtg tgaccactaa aagccagccc agtgatattt tgcagttcgt
     1861 gacggtgacc tctaaagaca atagccgaga cgcattgttt ttaagtaact ttgccaactt
     1921 gcagatgcag cagcgactag cccgtatccc cggtgtggca gcagccaacg tcttcggggt
     1981 gggtaactac agcatgcggg tatggctcga tcctgaacag atgaaagcta gaaacctctc
     2041 gccgtctgaa gtgatgtcag ccattaacag ccagaacgtg ttgttgtctg ctggccagat
     2101 cggtgcacca ccggtcccta aggggcaggc gtttcagttt accgtcaacg tcaacagtgc
     2161 catggacacg cccgagcagt tcgggcagat tgtgttgaaa gaggccaatg gccaactcac
     2221 gcgtctacgt gatgtggcgc gcattgaaat gggcagccaa aactacagtc agttcttcgg
     2281 gttgaatgat aagcccgctg gtggtattgc tatctatcag ctgccagagg ccaacgcgct
     2341 gcaggtcgcg caagcggtgc gcgatgagat ggacaagatt tccaagacct tcccatcaga
     2401 catccaatgg gagattccat acgacagtac cgtctttgtg agtagctcga ttgacgaggg
     2461 gtactccacg ctttacgaag ccggtttgct cgtgttgctg gtgattctga tcttcttgca
     2521 gaattggcgc atcaccctgg tgccagcggt cactattcca gtaaccatta ttggtgcgtt
     2581 tgcgggtatg gcggcgttgg gattctcgat taacttattg acgctttttg ccattgtggt
     2641 ggtcattggt atcgtggtcg atgactcgat cgtggtcgtt gaagccgtgg ccaagaatgt
     2701 agagaagggc atgaagccca aggccgcggc catggaggcc atgcgagagc tgatggggcc
     2761 gattatcggt attactttgg tgctgatggc ggtgtttttg ccggcttcgt ttatctccgg
     2821 cattaccggt cagatgtatc gacagtttgc gttggtgatt gcgatcacag cattgcttag
     2881 cggtatcgcg gccatcagtc tgagtccggc gcaatccggt gagttcatca aaccgattga
     2941 tccgaatgct aaaaagaaac aaaagaattg gttctcgcgc gggtttgata aggggttcgg
     3001 tgccattgcc tcgacttacg ccaagatgat gcatagcctg gtcaagcaca gcaccatcac
     3061 ggcactcgtg ggcttggcca ttattgctgc atcggtgtat ggctttacca aggtccccac
     3121 gggcttcatt ccgaatgaag accaaggcta cttaatgact accgtcacct tgccgtccgg
     3181 ggcttcactg gagcgcaccc aagccgccat ggatgcggtt cgtgctgccg cgcaaaagat
     3241 cgatggtgtc gatcaggtgg tgtccattgg cggcgtgagc ctgctagaca gcttctcgcc
     3301 agacccgagt gccggcggca tgtttatcac gcttaaaccc tgggatgagc gcagcaaggc
     3361 caagggcacg gatttgcgca gcatctacat gaatctgacc aaggcgtttc acgacattga
     3421 gtcagcagcc acccaggtga ttttgccgcc agccattcct ggcttgggca tgtccggtgg
     3481 ttttaacctg cagctgattc tgacggatgg cagcaacagc tttgagaagc tgcaagcggc
     3541 aacagatgac ttccttgctc gggcgatgaa gttgcccgaa gtccaagtgg cgttctcgtc
     3601 gtttaacaac aacgtgcctc agttggaatt gacctttaat ccggccagag cagaaacact
     3661 cggcgtgagc attggtgatg cctatgatgt gctacagaca tatttaggct cttcatacgt
     3721 caatcagttc tttaagttcg gtcagaccta ccaggtgtat gtgcaagctg acggtcagta
     3781 ccggaccgac atcaacg
//
LOCUS       DATBNL010000426         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_54877, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000426 DATBNL010000000
VERSION     DATBNL010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54877"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VIC30_07450"
     CDS             <1..296
                     /locus_tag="VIC30_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEY7804252.1"
                     /translation="ELGRVMPRLSHRHGLTTGEIDDLLDLLCIQAEMIEPTDTDELKL
                     RDTNDLPVLGTLIAGIQSHAVNYLITGDKDLLVVSDDYPILSPGQFWSKHGGL"
     gene            complement(345..1283)
                     /gene="glsA"
                     /locus_tag="VIC30_07455"
     CDS             complement(345..1283)
                     /gene="glsA"
                     /locus_tag="VIC30_07455"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HEY7804253.1"
                     /translation="MSYDPTKLQSLVNDVYARHKDDTGGQNASYIPYLARVPSTLCAL
                     AVMTPDGTVVTAGDSDYRFAIESISKVPTLALALEDVGADAVQQKIGANPTGMAFNSV
                     MALELHGGKPQSPLVNAGAMSSVSIIDAKDVEDRWQRILKMQRDLLGANVALSAEVNE
                     SEQTTNFHNRAIAWLMYADGTMYADPMEVCDVYTRQCSTLITTIELATMAATLAARGR
                     NPITGQQVLNGDHVPRVLAEMAMEGLYDSSGDWAYTVGLPAKSGVGGGIMAVAPGKLG
                     MAAFSPPLDSVGNSVRAQKMIADVAQELRLNLYDPG"
     gene            1364..1612
                     /locus_tag="VIC30_07460"
                     /pseudo
     CDS             1364..1612
                     /locus_tag="VIC30_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017423358.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
BASE COUNT          400 a          461 c          445 g          394 t
ORIGIN      
        1 ttgagcttgg cagagttatg ccgcgtctga gtcatcggca cgggttaacg actggcgaaa
       61 tcgatgacct gcttgacttg ctttgcatac aggccgagat gatcgagccc accgacacag
      121 atgagctaaa gctcagggat accaacgatc tcccagttct gggtactcta atcgcaggaa
      181 tccaaagtca cgccgttaac tacttgatca caggggataa ggacttgctg gttgtatcgg
      241 atgattaccc aatcctgtca ccgggccagt tttggtcaaa acacggcggg ctttaacggc
      301 aagccctgta gactgcgaca gatatcccca tccacttagc tcaattaacc tgggtcgtac
      361 aaattcaacc gcagctcttg cgctacatct gcgatcattt tttgtgctct gacgctatta
      421 cccacgctat caagtggtgg agagaacgcc gccataccaa gcttgccggg tgccacggcc
      481 atgatgccgc caccaacgcc acttttagcg ggtagaccca cggtgtaggc ccaatcaccc
      541 gagctgtcgt aaagaccttc catggccatc tcagccaaca cacgcggcac atgatcacca
      601 tttaagacct gttgtcctgt gatggggttt cgcccccgag ccgctagcgt ggctgccatg
      661 gtcgcaagct caatggtggt aatgagtgtc gagcattgcc gggtatagac gtcacagact
      721 tccatgggat cggcatacat cgtgccatca gcgtacatga gccaggcaat cgccctgttg
      781 tggaagttcg ttgtttgttc ggattcgtta acttcagcgg ataacgccac gtttgcgccg
      841 agcaagtcgc gctgcatctt caaaatccgt tgccagcggt cctcgacatc tttggcgtca
      901 atgatgctta cagaagacat cgcaccggca ttgaccagag gtgactgtgg tttgccaccg
      961 tgcaactcaa gtgccataac cgaattaaag gccatgcccg tcggatttgc accgatcttt
     1021 tgttgtacgg catccgcacc gacatcttcg agcgccaagg ccaacgtcgg cactttagag
     1081 atcgattcga tggcaaagcg atagtcacta tcgccggcgg tcaccacggt gccatcgggt
     1141 gtcatcactg ccaatgcgca tagcgtggat ggcacacgcg cgaggtatgg gatgtaactg
     1201 gcgttttgtc cgccggtgtc atccttgtga cgggcgtaaa cgtcattgac cagcgactgg
     1261 agtttggttg gatcgtaaga cacgctagga cctcgctcgt attgactatt gtgaggccca
     1321 tgacaaatgc gccccgaatc agtcaagttt acgccgccat catgacggcg cggcaatgcc
     1381 ctgccacaat gcgcgtgagt tgcccaggct tgagatctcg aatatcaaaa atcatgatat
     1441 cagacacatt tggtatcaca gccaagcatt taatatcttt cgcagggatg actggatgca
     1501 ggagccctgc cgctcttgtg acgaaaaaaa agactttggt ggttgccgct gtcaggccta
     1561 tttgctcagc agtgacgcag cagcagcgga tccagtgtgc tcaaagtccc ctaatcaaca
     1621 gttagtgcaa gatgccatcg cagcagcgcg cacggttcag gcaaaatcag ggttgaagga
     1681 gcatccaatt gtttttagaa
//
LOCUS       DATBNL010000427         2552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_85045, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000427 DATBNL010000000
VERSION     DATBNL010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85045"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VIC30_07465"
     CDS             <1..844
                     /locus_tag="VIC30_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HEY7804254.1"
                     /translation="MDTYGHDIAKLKQAFIEFVQRLPFYGSAVVCVDDANVREIMPLI
                     SRPILTYGLSEQAQIRATDVQAIDTTMQFNVHRHLLGKTHDVLSVRLNLPGLHNVHNA
                     LAAIAVATELGLSDDAIVGALADFRGVGRRFSVSGPFAAPHGGEFMLVDDYGHHPVEM
                     AATLAAARGAWPDRRVVLVFQPHRYTRTRDCFEDFVQVLNTADAVLLTEVYAAGESPI
                     VAADGRALARAVRVAGKIEPVFVPDVQALPQAMRSFAQDGDVFVVMGAGSVSRVPAMM
                     GEPA"
     gene            841..1821
                     /locus_tag="VIC30_07470"
     CDS             841..1821
                     /locus_tag="VIC30_07470"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY7804255.1"
                     /translation="MSRPLTVERVGNLGKVGVLYGGRSAEREVSLMSGQGVHQALLAE
                     GIDAHRFDPSQQGLGELAAAKFDRVFVALHGRYGEDGTIQGALELLGIPYTGSGHLAC
                     ALAMDKIMTKRVWEQSGLPTPNYRVVRQASDLNDLPEALGLPLILKAPNEGSTIGLAK
                     VTEREQLQAAYEAVRQFDDTILAERFVAGRELTVAVIGAGAQSMALPIVEIIAPGGNY
                     DYQSKYFSDETQYLCPAPVSETLQQQISEIAVRAYQALACEGWARADLMLDADMKPWL
                     LEMNASPGMTGHSLVPMAAKEAGLSFGQLCIRILSQARCKVVQRDRTDQA"
     gene            1831..>2552
                     /locus_tag="VIC30_07475"
     CDS             1831..>2552
                     /locus_tag="VIC30_07475"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEY7804256.1"
                     /translation="MWNEARLINAAANLLMVLAVLAFLVAALLWVLRLPAFDIKRIVI
                     SPNTPAAFDYVSPDVVRSAIAGRLEGNFFSMDLAQAREAFESAPWVREVNVKRVWPNE
                     LHVDIQEQEPLALWNENQLLNGWGEVFTANRAVLDDQAALPQFYGPEGSASLLVQRYA
                     ELGQWFEKLGLSVEQLSLNDRYALQATLSNGVTLILGRDPGAETADPQAGVPGAVSFG
                     ERIERFVRNWPQAAAQLEGQSV"
BASE COUNT          491 a          635 c          830 g          596 t
ORIGIN      
        1 tatggatacc tatggtcacg acattgccaa gcttaagcaa gcgttcatcg agttcgttca
       61 gcgcctgccg ttttatggca gcgcagtggt gtgtgtcgac gatgcgaatg tacgtgaaat
      121 catgcccttg atttcgcgcc cgattctcac ttacgggttg agcgagcaag cgcaaattcg
      181 tgccacggac gtgcaggcga ttgataccac catgcagttc aatgttcatc gacatctttt
      241 gggtaagacc cacgacgtgc tcagtgttcg actgaatttg ccggggttgc acaacgtgca
      301 taacgcgctt gcagccattg cggtggccac agagttgggc ttgtctgatg atgcgattgt
      361 cggtgccttg gcagacttcc gtggtgtggg ccgtcgtttt agcgtctcgg gcccgtttgc
      421 cgcaccacat ggtggcgaat tcatgcttgt tgatgattat ggtcaccacc cggtcgagat
      481 ggcagcgacc ttggcggcag cgcgtggcgc ttggcctgat agacgcgtgg tgttggtgtt
      541 tcagccgcac cgctatacgc gcacccgtga ttgctttgag gattttgtgc aagtgttgaa
      601 cacggctgat gcggttttat tgactgaggt ctatgccgca ggcgagtcgc caattgtggc
      661 cgccgatggt cgtgcattgg cacgcgcggt gcgcgtggcc ggcaagatcg aaccggtgtt
      721 tgtgccggat gttcaagcgc tgccgcaagc gatgcgatcg tttgcccaag atggtgatgt
      781 gtttgtggtg atgggagcgg gcagtgtgag ccgtgtgccc gccatgatgg gagagccggc
      841 atgagcagac cgttgaccgt ggagcgtgta ggcaacttag gcaaggtcgg cgtgttgtac
      901 ggcgggcgtt cagctgagcg cgaagtctcg cttatgtcag ggcaaggcgt gcatcaggct
      961 ttgcttgccg agggtattga tgcgcatcgg tttgatccga gccaacaagg actcggtgag
     1021 ctcgcagcgg cgaaatttga cagggtgttt gtggcattgc atggccgtta tggtgaagac
     1081 ggcacgatcc aaggtgcttt ggagttgctc ggtattccgt acacaggcag cggtcacctt
     1141 gcctgcgcct tggccatgga caaaatcatg accaagcgtg tctgggagca atccgggcta
     1201 cctacgccaa actaccgagt ggtgcgtcaa gcgtctgact taaacgattt gcccgaagcg
     1261 ttgggcttgc ctttgatttt gaaagcaccc aatgagggtt caaccattgg cttggccaag
     1321 gtgactgagc gcgagcaact tcaagcggcg tacgaggcgg ttcggcagtt tgatgacacg
     1381 attttggctg aacggtttgt tgccggtcgt gaattgacgg tggcggttat cggtgcaggc
     1441 gcgcagtcca tggcattacc cattgtggaa attatcgcgc ccggtggtaa ctacgattac
     1501 caaagcaagt acttctctga cgagacgcag tatctttgcc cggcgcctgt gtctgaaaca
     1561 ttgcagcaac aaatcagcga gattgctgta cgcgcatatc aggccctggc gtgtgaagga
     1621 tgggctcgag ccgacttgat gctcgatgcg gatatgaagc cctggttact tgaaatgaac
     1681 gcttcgcctg gcatgacggg tcactcgctc gtgcccatgg cagccaaaga ggctggcctg
     1741 agttttggtc agctgtgtat acgaattctc agtcaggcgc gctgcaaagt ggtgcagcgt
     1801 gaccgaactg atcaggcata ggggtgctac gtgtggaacg aagcccgatt gatcaatgcc
     1861 gcggccaacc tgttgatggt gttggcggta ctcgcttttt tagtggcggc attgctctgg
     1921 gtgctcaggc tgccggcatt cgatatcaag cgcatcgtga tttcacccaa cacgccggct
     1981 gccttcgatt acgtgtcgcc cgatgtggtg cgcagcgcga tcgcgggcag actggaaggc
     2041 aactttttca gtatggactt ggcgcaggca cgcgaggcgt tcgaatcggc gccctgggtg
     2101 cgcgaggtca atgtcaagcg tgtctggccc aacgagttgc acgtcgatat ccaagagcag
     2161 gaaccactgg cgttgtggaa cgagaaccaa ttgctaaatg gttggggcga ggtgttcaca
     2221 gccaatcggg cggtgctcga cgatcaagcg gcgttgcccc agttctatgg tccggaaggt
     2281 tcagcctcgt tgctggtgca gcgctatgcc gagctcgggc agtggttcga gaaactgggg
     2341 ctaagcgtcg agcaactcag tctgaacgac cggtacgcat tgcaagcgac gttatccaat
     2401 ggcgtgacgc tgattctcgg gcgcgatccg ggcgccgaga cagccgaccc gcaagccggt
     2461 gtgccgggtg cggtgtcgtt tggcgagcgt atcgagcgat ttgttcgcaa ctggccgcag
     2521 gccgcagcgc agttagaggg acagtcggtc ga
//
LOCUS       DATBNL010000428         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_74986, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000428 DATBNL010000000
VERSION     DATBNL010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74986"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VIC30_07480"
     CDS             complement(<1..619)
                     /locus_tag="VIC30_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEY7804257.1"
                     /translation="MSTSRVASSGPVRVAIAGLGAIGQSLAQSLASGTVPGVELVAVS
                     AKNHDKAQAFAQTLAHQVPVLRIDELEPRADLVVECAPAALLSDIVTPFMKAGKQAIV
                     LSVGALLFQDHLREVASVHGGTIMVPTGALLGLDAVIAAAEGQIHTVRMVTRKPPAGL
                     KGAPHLVEHNINVDGLTQPLKVFEGNARDAAKGFPANLNVVVALAL"
     gene            1049..2020
                     /locus_tag="VIC30_07485"
     CDS             1049..2020
                     /locus_tag="VIC30_07485"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY7804258.1"
                     /translation="MLKAKFLTAAASVACAGLMAVSTSASAAAPNCSTAQMIVPWGAG
                     GDTDIVFRTYVDAINKTGIKPQLQVVNVGGQGGIRGTAQVKDAKPDGCSLIALHESVI
                     TSFLTGRAKFTHDQFEPVAVVSFTPSIVGASVKAPFQSLPEMLAMSKKDPESVTVGVT
                     LGSTSHFIFLLIEDAADVKFRYVSYDGTRQRNTALLAGNVMMGETNVLTAKKYIEEGS
                     LIALGIATEERDPVVPIVQTLKEQGVNVLYGLTRGVALPKGTPADVVKFWETAFNKAS
                     QDPALVKSIEEKGSVVMSKGSKGYADFLKQSYAEHERLAIKIGMYKK"
BASE COUNT          546 a          599 c          559 g          479 t
ORIGIN      
        1 cgagtgccag tgccacgact acatttagat tggcaggaaa ccctttagct gcatcgcgcg
       61 cattaccctc aaatactttg agtggctgcg tcaagccatc cacattgata ttgtgctcaa
      121 ccagatgagg cgcgcccttc aggccagctg gcggcttgcg agtcaccata cgtaccgtgt
      181 ggatctgccc ttcggctgca gcaatcaccg catcaagtcc aagtaaggca ccggttggca
      241 ccataatggt gcctccatgc acgctcgcca cctcacgcag atgatcttga aacagcaatg
      301 caccaactga gagcacgatg gcttgtttgc cagccttcat aaagggcgtg acgatatccg
      361 agagcaaagc agcaggcgcg cactcgacca ccaggtctgc cctaggctct agctcgtcaa
      421 tgcgtaatac cggtacctga tgcgccagtg tctgggcaaa ggcttgggct ttgtcatgat
      481 tcttggcaga tacggcgacg agctctacgc ccgggacagt accagaagcc aatgactgag
      541 ccaaagactg accaatggca ccaagacccg cgatcgctac gcgaaccgga ccagatgaag
      601 caacgcgact tgtagacatg tttgagccct tagtaaaaca atttctagta aaacaaattc
      661 aggtgaaaca accacacaaa cctctgatga tacgtgagcg cagcaccgca atccagattg
      721 gccgccgccg gactgtaaat gtgcctaagg gattccaaga ccaagggttt cccccacggt
      781 tttgcccttg atcattaaac gctgcaccgt gacaatcagg gtctacgttg ttggttgtca
      841 cttttctgtc tttttttgag tggacaacgt taatgacggg catgaatctt gcttacgtgg
      901 ttcttgcttt cgagcacgtc tcgatcagtg cgctgatgtt gattatcttg ctaaacgcaa
      961 gatcgccccc aatcatccga gccacaaccc tgtacgcact atacgattta caacggttaa
     1021 taaaacctta aaaacaaaag gagttcttat gttgaaagcc aagttcctaa ccgccgcagc
     1081 atcggtggct tgtgccggcc tgatggccgt atcaacgagc gcgagtgcag ccgctccaaa
     1141 ttgctcaacc gctcaaatga tcgtgccttg gggcgccggc ggtgacaccg acatcgtgtt
     1201 tcgcacctat gtggacgcca tcaacaaaac cggcatcaag ccacaactgc aagtggttaa
     1261 cgtcggtggc caaggcggta tccgtggtac ggcacaagtt aaagatgcca agcctgacgg
     1321 ttgctcactg attgctttgc acgaaagcgt catcacaagc tttctgaccg ggcgcgccaa
     1381 attcacgcat gaccagtttg agcccgtggc cgtcgtgagc ttcaccccct cgattgtggg
     1441 tgcatcggtc aaagcgccgt tccaatcact gcctgaaatg ctggccatgt ctaagaaaga
     1501 ccctgagtca gtcaccgttg gcgtgacgct aggttcaacc agccacttca ttttcttgtt
     1561 gatcgaagac gctgctgatg tcaagttccg ttacgtctcc tacgatggta cgcgccagcg
     1621 caacacggcg ttgctggctg gtaacgtcat gatgggtgaa accaacgtgc tgaccgccaa
     1681 gaagtacatc gaggaaggtt cgttgatcgc gcttggcatt gccactgaag agcgtgatcc
     1741 tgttgtgcct atcgttcaaa cgcttaaaga gcaaggcgtc aacgtcctat acggcttgac
     1801 ccgtggcgtg gcattgccta aaggcacacc ggctgacgtc gtcaagttct gggaaaccgc
     1861 ctttaacaag gcctcacagg acccagcact ggtcaaatcc atcgaagaaa aaggctcggt
     1921 cgtgatgtcc aagggcagca agggttatgc tgacttcttg aagcaatcct acgctgagca
     1981 cgagcgtctg gccatcaaga tcggtatgta caagaagtaa gcactgcaaa ccggcgtgcg
     2041 tttcaggtat gattcgcacg ccgaaatttt caaacaggcc ctgctggcgt tagccccaag
     2101 ggcctgatta cattaagggg gatggcaaaa gccatcgggg aacccaacga aagcggcagt
     2161 caagcgtaat taaatcaatg agc
//
LOCUS       DATBNL010000429         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_64967, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000429 DATBNL010000000
VERSION     DATBNL010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64967"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VIC30_07490"
     CDS             <1..453
                     /locus_tag="VIC30_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEY7804259.1"
                     /translation="HQNIDMAEAEKLATKMKSGNKFDLNDFRDQIAQVKKMGDMSSLL
                     EKLPGDLAQAAGQLQGGQAEKQLRRTEGILNSMTAVERAKPELLKASRKRRIATGAGV
                     PVQEVNRLLKQFEQMQGMMKKMKKGGMAKMMKAMGGMKNLPGMGGFGR"
     gene            complement(491..1186)
                     /gene="trmB"
                     /locus_tag="VIC30_07495"
     CDS             complement(491..1186)
                     /gene="trmB"
                     /locus_tag="VIC30_07495"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEY7804260.1"
                     /translation="MEPNQTDQPNQAHIRSFVHRRGHITAGQRQALETLAPQWTLPFE
                     RKRLDYDTLFKRSGAPTVLEIGFGMGETTAQIAQSRPEDNFLGVEVFNAGVGSLLNRI
                     DNLGLTNVRIIQHDVVEVLRDMIAPDSLSGVHIYFPDPWPKKRHHKRRLIQPPCIELL
                     LNRLQLGGYIHCATDWEHYAHQMLEVLSGNAQLANTCEGFCARPEWRPLTKFEARGLR
                     LGHGVWDLVFKKQ"
     gene            complement(1186..1386)
                     /gene="thiS"
                     /locus_tag="VIC30_07500"
     CDS             complement(1186..1386)
                     /gene="thiS"
                     /locus_tag="VIC30_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003110013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEY7804261.1"
                     /translation="MNIFLNGEPKTLATQNTVLELLQELALADKRVAVEINGDIVPRS
                     QHATRELAEQDQVEIVVAVGGG"
BASE COUNT          347 a          388 c          437 g          335 t
ORIGIN      
        1 caccagaaca tcgatatggc cgaggctgag aagctcgcca ccaagatgaa gtcgggtaat
       61 aaatttgacc tcaacgattt ccgagatcaa attgcccagg ttaaaaaaat gggtgacatg
      121 agcagcttgt tagaaaagct cccgggtgac ttggcacagg ctgctggcca gttacagggc
      181 ggtcaagcag aaaagcagtt acgccgcacc gagggcattc tgaattccat gaccgccgtt
      241 gaacgcgcca agccggaatt attaaaagcc tcccgcaagc gtcgcatcgc gaccggtgcc
      301 ggtgtgccag ttcaagaggt caatcgtctg ctcaagcagt tcgagcagat gcagggcatg
      361 atgaagaaaa tgaagaaagg cggtatggcc aagatgatga aggccatggg cggcatgaaa
      421 aacctccctg gcatgggtgg tttcggtcgc tagtgtctat cgcagtgact gagtcactct
      481 attagacagg tcactgcttc ttaaacacca gatcccacac gccatgaccg agtcgcaacc
      541 ctcgggcctc gaatttggtc aaaggccgcc attcgggccg cgcacagaac ccctcgcacg
      601 tgttggccag ttgcgcgttg cctgacagga cttctagcat ttgatgggcg taatgttccc
      661 agtcggtggc gcagtggatg taaccgccaa gttgcaggcg attcaatagc agttcgatac
      721 acggcggttg tatgagtcgg cgtttgtgat ggcgtttctt aggccaagga tccgggaagt
      781 aaatgtgcac cccggatagc gagtccggcg caatcatgtc acgtaagacc tcgacaacgt
      841 cgtgctgaat gatccgcacg ttggtcaagc ccaagttgtc gatacgattt aacagcgaac
      901 ccacgccagc gttaaagact tcgacaccca gaaagttatc ctcgggccgg gattgggcga
      961 tttgggcagt ggtttcaccc atgccaaacc cgatctcaag caccgtgggc gcaccagagc
     1021 gcttgaataa agtgtcgtag tcaagtcgtt tgcgctcgaa gggcagtgtc cactgtggtg
     1081 ctaacgtttc aagcgcctgg cgctggcccg cggtgatgtg accacggcga tgcacgaagc
     1141 tgcggatatg agcttgattg ggttgatccg tttggttcgg ctccatcaac cgcctccgac
     1201 agccacgacg atttcaacct ggtcttgctc ggcgagctcg cgtgtggcgt gttggctgcg
     1261 cggcacgatg tcgccattga tctcaacggc cacgcgcttg tcagccagtg ccagttcctg
     1321 caacagttcg agtacggtgt tttgagtggc gagggttttt ggctcgccat ttaaaaatat
     1381 attcatgggt tgtattttag accggggctg caaccgcttt tgcagaaaaa gccagcagca
     1441 gaaatatcat ctggccgagg cggcgtcaca tagtcgttta ttgcgctgtg tggcattcag
     1501 tggcgct
//
LOCUS       DATBNL010000430         4399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_183520, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000430 DATBNL010000000
VERSION     DATBNL010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183520"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..1130)
                     /gene="waaC"
                     /locus_tag="VIC30_07505"
     CDS             complement(174..1130)
                     /gene="waaC"
                     /locus_tag="VIC30_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009460117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEY7804262.1"
                     /translation="MTRVLIVRTSSLGDLVHMLPAISDIAANVPDLQLDWVAEEAFAA
                     IPSWHPAVNEVIPVAHRRWRKSWFSGQTRAERQKVLQTIRSKRYDVVLDMQALLKSIW
                     LVRAASGTKHGLDWRSAREPLCSLFYDVRHRVAFWQPAVLRQRQLAAAAFGYQWQGDP
                     DFGLHAFASGDRTAKPYAVIMPSASRDDKLWPAEHWQAVFDRLQVAGLDLVVLAGNDH
                     EAARGQDLIDVRQHAFVQPKSSLTELAGLLAKARIMVGLDSGLTHLSAALGVDTIGIY
                     KASTPVRTPLVGTGYTASLGDRGREPSRAAVLEAIEQALGRV"
     gene            complement(1127..2044)
                     /gene="rfbD"
                     /locus_tag="VIC30_07510"
     CDS             complement(1127..2044)
                     /gene="rfbD"
                     /locus_tag="VIC30_07510"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006575884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEY7804263.1"
                     /translation="MSNPEITPRIFLIGASGQVGHAWQTLLPDGQLVAVDRHALDLSQ
                     TDSLAQRLHEQLLDAQPTAVVNAAAYTAVDQAEDHEQLAYDINALAPGIIADVAARLQ
                     LPLIHYSTDYVFDGHGDRPFVETDTPAPLSVYGRSKLAGEQAVQAAGGAHLIFRTSWV
                     FGVHGQNFLKTMLRLAQERDRLSVVNDQIGAPTSAHLLASVPLQLLHDLHDHQDPRWG
                     LYHLCPAGHTSWHGYASYVIARARSLGWKIKVADDAIVPVASSEFPVKAPRPKNSRLC
                     TEKLQNAFGLTLPSWQSGVDAVLAQLDMS"
     gene            complement(2063..2824)
                     /locus_tag="VIC30_07515"
     CDS             complement(2063..2824)
                     /locus_tag="VIC30_07515"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY7804264.1"
                     /translation="MPEYWSVLFPSTTMLLVMLLVTAAAATMRAFSGFGNGLLLAPVF
                     SLYLSPQDMVTVITIINLLGTLQMLPGVWRHIDWPLIWRMVPAALAGVPLGWLFLNAI
                     EPAMVRRVIAVIVILLSLLLLAGWTYRGTRGRYQEMGAGVCSGALTAMAGMGGPPFIL
                     YMLSAPSYSPVAFRTFLTVFFVFSQVLVLSVILSTGAFSVNQLVYVGTLLPVHIMATV
                     LGSFLFVRALKGKTERIKRICLLILLLVGLIVLFL"
     gene            complement(2865..3647)
                     /locus_tag="VIC30_07520"
     CDS             complement(2865..3647)
                     /locus_tag="VIC30_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011617905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY7804265.1"
                     /translation="MDSLIVEKQEAIGRITFNDPARLNAMSYEMWAGLTEALLGFEHD
                     DEVRAVLLTGAGDKAFVSGANIAQFDTLRTTTDAVAEYERVAEGAQEALYQFPKPTIA
                     RIQGYCIGGGLNLALCCDVRIAREGSTFFLPAGKMGLGYRFSAIRNLVTAVGAPNALD
                     IFLSARRLTTEEALQKGLVQLTAPAVQFEQVVQDYIDKVSANAPLTLRAGKHMIRQFQ
                     QLPVNTDLEQMRALMQQCFDSEDYAEGKRAFADKRPPQFRGR"
     gene            complement(3656..4366)
                     /locus_tag="VIC30_07525"
     CDS             complement(3656..4366)
                     /locus_tag="VIC30_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008161428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HEY7804266.1"
                     /translation="MAAFDSFGKPDNLADEIAAQLRDRILKETLSPGQRLPTEQALGA
                     QFGVSRNVVREAIARLKLTGLVETRHGVGTFVKHDLDNRPFEVAQDDLLDFKQLIDVY
                     RLRVEVEAGAAALAATHRTAAQLEAIKLALRQSEQHPEDWEADAKSAVDFHLAIIQAA
                     NNPYFVRIMGHLDSVIRDAVRTLRFRCLGTSRIEEIDGEHERIADAIERQDANAARQA
                     MREHLEHGINGYRNLFGN"
BASE COUNT         1100 a         1289 c         1122 g          888 t
ORIGIN      
        1 tcatggagtt catgccgcca ccacagtgcg atccaggcca aaggcgccag tagcaccaac
       61 agggttgagt aaatcaaacg tgggagcaca acgacaacct ttgaacacga caagactgtc
      121 agtataagca agccgttggg actttccgac aaagtcccgg accaagtccg gacctagacg
      181 cgaccgaggg cttgctcgat cgcctctagc acagccgctc gacttggctc ccgacctcgg
      241 tcaccgaggc tagcggtgta accggtgcca accaaagggg ttcggaccgg tgttgacgct
      301 ttatagatac caatcgtatc gacaccaagc gccgcggaca aatgcgtcaa gccactgtcc
      361 aaacctacca tgatgcgcgc tttggccaaa agccctgcca actctgtgag cgaggattta
      421 ggctgtacaa aagcatgttg ccgcacatca atcaaatctt ggccgcgcgc tgcttcatgg
      481 tcgttgcccg ccaaaaccac caagtctaat cccgccactt gcaggcgatc aaacacggcc
      541 tgccagtgtt cggccggcca cagtttgtcg tcccggctcg ccgacggcat gatgacagca
      601 tatggcttgg ccgttcgatc accgctagca aatgcgtgca acccaaagtc agggtcgcct
      661 tgccactgat aaccaaaggc agctgcagct aactgtcgct ggcgcaagac cgccggctgc
      721 caaaacgcca ctcgatggcg cacgtcgtaa aacagggaac acagaggttc tcgagccgag
      781 cgccaatcca gaccatgttt ggtaccactt gctgcacgca cgagccaaat ggacttcagt
      841 agtgcctgca tatcaagcac cacgtcatag cgcttgctac gaatcgtctg caaaaccttt
      901 tggcgctcag cgcgcgtttg tcctgaaaac caagacttgc gccaacgccg gtgggccact
      961 ggaatcacct cattgaccgc cggatgccag ctcgggatgg cggcaaaggc ctcttccgcc
     1021 acccagtcaa gctgcaaatc aggcacgttc gcagcgatat cactaatggc gggcaacatg
     1081 tgtaccaagt caccgagtga tgaggtgcga acgatcaaca cacgggtcat gacatgtcca
     1141 gttgggccag cacggcgtcc acgccggatt gccagctcgg cagtgtcaaa ccaaaggcat
     1201 tttgtagctt ctcggtgcaa agacgcgagt tctttggtcg aggcgctttg accggaaact
     1261 cacttgaggc cactgggaca atcgcatcat cagcaacttt gatcttccag cctagcgatc
     1321 gagcgcgtgc aatcacgtaa ctggcatatc catgccaact ggtatgaccg gcaggacaca
     1381 ggtgataaag cccccagcgc gggtcttgat ggtcgtgcaa gtcgtggagc aactgcaatg
     1441 gcacacttgc taacaagtgg gcactcgttg gcgcaccgat ttgatcatta accaccgaca
     1501 accggtcgcg ctcttgtgcc agacgcaaca tggttttaag aaagttctgt ccatgcacac
     1561 cgaacaccca gctcgtgcgg aaaatcaggt gtgcgccccc tgcggcttgc accgcttgct
     1621 caccagcaag cttgctgcgg ccgtaaaccg acaacggcgc tggcgtatcg gtctctacaa
     1681 acggtcggtc accgtggcca tcaaatacgt aatcggtcga atagtgaatc agtggcaact
     1741 gcaaccgggc agccacatcg gcgatgatgc caggtgctaa agcattgatg tcataagcca
     1801 attgctcgtg atcttcagct tggtcaacgg ccgtataagc cgcggcattc acaacggcag
     1861 tgggttgggc atctaacagc tgttcgtgca ggcgctgcgc taatgagtcg gtttgcgaga
     1921 gatcaagcgc gtgacgatct accgccacca attgaccatc cggcaataaa gtctgccaag
     1981 catgaccaac ctgaccgctg gcgccaatta aaaatatacg gggcgtaatc tctggattcg
     2041 acatcaccgc attgtatgct cgctacaaga acaacacgat taggcccacg agcaacaaaa
     2101 tcagcaagca aatccgcttg atacgttcgg ttttaccttt aagtgcacgc acaaacaaaa
     2161 acgagccaag caccgtcgcc atgatgtgca cgggcagcaa cgtacccaca tagaccagtt
     2221 gattcactga aaaagcgcct gtagacaaga tgacgctcaa caccagcact tgggagaaaa
     2281 cgaaaaatac ggttagaaag gtccgaaatg ccacaggcga atagctaggc gcagaaagca
     2341 tgtacaaaat gaatggtgga ccacccatgc cagccatcgc ggtcaaggca ccactacaca
     2401 caccggcccc catttcctga tagcgacccc gcgtgccacg ataggtccaa ccagccaaca
     2461 gcaacaaaga caacaagatc acgatgacag cgatcactcg tctaaccatc gctggttcaa
     2521 tggcattcaa aaacagccac ccaagcggca ctccggccaa agcagcaggc accatgcgcc
     2581 aaatcaaagg ccaatcgata tgtcgccaaa cccctggcag catttgcaag gtacccagaa
     2641 gattaatgat cgtgatgacc gtgaccatgt cttgtggtga caggtacaaa ctaaagactg
     2701 gcgcgagcaa aagtccatta ccaaacccgg aaaacgctcg catcgttgct gcagctgctg
     2761 ttaccagcag catgactagc aacatggttg tgcttggaaa gagcacactc cagtattcag
     2821 gcatggacgt gggggtaagc gcgagtgtta atgactaagc cctgctagcg tccgcgaaac
     2881 tgtggtggac gtttgtctgc gaaggcacgt ttaccctcgg cataatcctc gctgtcaaag
     2941 cattgctgca ttaacgcgcg catctgctct agatccgtat tgaccggcaa ttgctggaac
     3001 tgccggatca tgtgtttacc cgcgcgcagc gtcaaaggtg cgttggctga tactttgtca
     3061 atatagtctt gcaccacctg ctcgaattgc acagccggtg ccgttagttg cacaagaccc
     3121 ttttgcaaag cttcttcagt ggtgagacgt ctggctgaca ggaagatgtc gagcgcattg
     3181 ggcgcaccca ccgcggtcac gagattgcga atcgcactaa agcgatagcc aagtcccatt
     3241 ttgccggctg gcaaaaaaaa cgtgctgcct tcgcgcgcaa tgcgcacatc gcaacatagc
     3301 gccagattca ggccaccacc gatgcaatac ccttgtatac gggcaatcgt cggctttggg
     3361 aactgataaa gcgcctcttg ggcgccttct gccacacgct cgtactcggc caccgcatcg
     3421 gtggtcgtac gcaaggtatc gaactgcgcg atgttggcac cagagacaaa cgctttgtcg
     3481 ccagcgccag tgagcaacac cgcgcgaacc tcatcatcat gctcaaagcc caatagtgcc
     3541 tcggttaacc ccgcccacat ctcataagac atggcattta agcgggccgg gtcattaaag
     3601 gtaatgcgac caatggcctc ttgcttttct acgatgaggc tatccatgca agcgtttaat
     3661 tcccgaacag gttgcgataa ccatttatac cgtgttcgag atgttcacgc atggcttgac
     3721 gcgcggcatt ggcatcttga cgttcaatcg catcagcaat gcgttcgtgc tcgccatcga
     3781 tttcctcgat gcgtgatgtg cctaagcacc gaaaccgcaa ggtcctgacc gcgtcacgaa
     3841 tcactgaatc aagatgaccc atgatgcgca caaagtaagg attgttagcc gcctgaataa
     3901 tcgccaagtg aaaatccacc gctgacttgg cgtccgcttc ccagtcctcg gggtgctgtt
     3961 cactttggcg cagtgccaac ttgattgctt ctagctgggc ggcggtacgg tgtgtggctg
     4021 ctaaagccgc cgcgccagcc tccacctcaa cccgcaagcg gtaaacatcg atcagctgct
     4081 tgaaatcgag caagtcgtct tgagcaactt caaacggccg gttgtccaga tcgtgtttga
     4141 cgaacgtacc cacaccgtgg cgtgtctcga ccaacccggt cagctttaat cgcgcgattg
     4201 cttcacgcac cacattgcga ctgacaccga actgtgcgcc tagcgcctgc tcggtcggca
     4261 gacgctgccc gggacttaag gtctctttca aaatacgatc acgtaactgc gccgcgatct
     4321 catcagccag attgtctggt ttgccgaaac tgtcaaaagc agccactggt ttgtttatgg
     4381 cctgccggcg gttttcccg
//
LOCUS       DATBNL010000431         3318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154707, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000431 DATBNL010000000
VERSION     DATBNL010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154707"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VIC30_07530"
     CDS             complement(<1..705)
                     /locus_tag="VIC30_07530"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEY7804267.1"
                     /translation="MALIVHKYGGTSMGSTERIRNVAKRVAKWHAAGHQVVVVPSAMS
                     GETNRLLGLAREISSMPDGRELDMIASTGEQASSGLLALALQAEGVQARSFTGWQVPI
                     RTDSAFTKARIAEIDDARIRAELDKGGVVIVTGFQGIDPDGNITTLGRGGSDTSAVAV
                     AAALKADECLIYTDVDGVYTTDPRVEPNARRLNVMAFEEMLEMASLGSKVLQIRSVEF
                     AGKYQVPLRVLSSLTPP"
     gene            complement(766..1896)
                     /gene="tilS"
                     /locus_tag="VIC30_07535"
     CDS             complement(766..1896)
                     /gene="tilS"
                     /locus_tag="VIC30_07535"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEY7804268.1"
                     /translation="MERHQAGVLETALATKLATVQANMSETLPGTPSLAVGLSGGPDS
                     SALAICLDQWCRRHPDKHSNHSNHPNRPDSQPHNPELYLFHVHHGLSDLADEWQARAQ
                     ALADLLERPLMVRRINVELDSGLGVEAAARQGRRQALIEMAHEHHVPVVALGHHQHDQ
                     AETVLMRLFRGSGIDGLAAMAAITHDRGVCWVRPWLEVSRQTILEYIDSFSQRTGWLP
                     VQDPSNVDSRLARGTLRTEVIPAIESHWPAWRTTLARHAGQAAQVSAVLKRYGQRLLK
                     ELACDPQSTDHHPDSLDPADSAPVLSLAKWRELQADEQALVIRVWLDQGGMQMPTEKR
                     LNELLRQLRQVHALGHDRALTWKQRDGEICCVRGQLHLRATL"
     gene            complement(1899..2864)
                     /locus_tag="VIC30_07540"
     CDS             complement(1899..2864)
                     /locus_tag="VIC30_07540"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEY7804269.1"
                     /translation="MRNTFLEFEQPLAELEQKVEQLRYVQADSAVDISEEITRLQQKS
                     QTLAKDIYGKLTPWQTALVARHPQRPYTLDYVREIFTDFHELHGDRQYADDQSIVGGL
                     ARFNGSPCMVLGHQKGRDTKERAARNFGMPRPEGYRKALRLMKLAEKFRLPVFTFVDT
                     PGAYPGIGAEERGQSEAIGRNIYAMAELKVPIISTIIGEGGSGGALAIATANTVLMLQ
                     YSTYSVISPEGCASILWRSADKAPDAAEALAITADRLKGFGLIDRVVNEPVGGAHRDP
                     RVMARLLRRALADALRHLAGMTSDELVEHRLQRLLAYGQFQEAKG"
     gene            complement(2927..>3318)
                     /locus_tag="VIC30_07545"
     CDS             complement(2927..>3318)
                     /locus_tag="VIC30_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018006857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEY7804270.1"
                     /translation="NAGPDVLRQSGLSGRKAEYILDLAGHFKNRLVRPARWSDMTDEE
                     VIAELTDIRGIGRWTAEMFLIFNLQRPNILPLDDIGLLKAISLLYFSGEPVSRYEARD
                     VAQGWHPWCTVATWYLWRSLDPIPVEY"
BASE COUNT          742 a          976 c          889 g          711 t
ORIGIN      
        1 aggcggtgtc agcgacgaga gcactcgcag ggggacttga tacttgcccg caaactccac
       61 tgagcgaatc tgcagcactt ttgagcccaa tgaggccatc tcaagcattt cctcaaacgc
      121 catcacgttt aggcgacggg cattgggctc aacgcgtgga tcggtggtgt agaccccatc
      181 aacatcggtg tagatcaagc actcatcggc tttaagcgca gcagcaactg ccacggccga
      241 tgtgtccgaa ccaccgcgac caagtgtggt gatgttgcca tcggggtcaa tgccctgaaa
      301 cccggtcacg atcaccaccc cgcccttgtc gagctctgca cgaatccgtg catcatcaat
      361 ctcagcaata cgagccttgg tgaatgcaga gtcggtgcga atcggcacct gccacccggt
      421 aaaactacgg gcttggactc cttcagcctg caacgctaat gcgagcaatc cacttgaagc
      481 ttgctcaccc gtggatgcaa tcatgtcaag ctcacggcca tcaggcatag aagaaatctc
      541 acgcgccaag ccaagcaggc gattggtttc gcccgacatg gccgaaggca ccaccaccac
      601 ttggtggcca gcagcatgcc acttcgccac gcgtttggcg acattgcgaa tacgttcggt
      661 gctacccatc gaggtaccac catatttatg tacgatcaga gccatatgaa ccttgtggcg
      721 aacgcctgca ccgttaatca gtgacagcgt tcaagtttca aagccctata gtgtagcccg
      781 aagatgtaac tgcccacgga cacagcagat ctcgccgtcg cgctgcttcc acgttaacgc
      841 gcgatcatgc cctagcgcat gcacctgcct gagctgacgc agtaactcat tcagacgctt
      901 ttctgtcggc atttgcatgc caccttggtc tagccagacc ctaatgacca aagcctgctc
      961 atcagcttga agttcacgcc actttgcgag cgagagcact ggtgcagaat ctgctgggtc
     1021 aagcgaatca gggtggtgat cggttgattg agggtcacac gccagctcct tgagcaaccg
     1081 ctggccataa cgtttaagca cggcactgac ttgtgccgct tgtccggcat gacgtgccag
     1141 cgtggttcgc caggcaggcc aatgcgactc aatggcagga atgacctcgg tgcgtaacgt
     1201 accgcgcgca agtcggctat cgacgttgct tgggtcttga acaggcaacc agcctgtgcg
     1261 ttggctaaag ctatcgatgt actcgagaat cgtctggcgc gagacctcaa gccagggtct
     1321 aacccaacac accccgcggt catgggtgat agctgccatg gcagccaacc cgtcaatgcc
     1381 tgagccccta aagagtcgca tcaataccgt ctcggcttgg tcatgttgat gatggccaag
     1441 tgccaccacc gggacatgat gctcgtgcgc catctcgatc agggcttgcc gccgcccttg
     1501 gcgcgcggct gcctccacgc caagacctga gtcaagttcc acgttaatgc gtcgcaccat
     1561 caatggacgc tctagcaagt cggcaagcgc ctgcgcgcgc gcctgccact catcggcgag
     1621 atcactcaag ccgtggtgca cgtgaaacag atagagttcg gggttgtggg gttgactgtc
     1681 tgggcggttg gggtggttgg agtggttgga gtgcttatcc gggtggcgac ggcaccattg
     1741 gtccagacaa atcgctagag cactggagtc tggcccgcca ctgagaccaa ctgcgagcga
     1801 tggcgtgcct ggcagcgttt ccgacatatt tgcttgcacg gttgccagct tggttgccag
     1861 cgctgtctca agcaccccag cctgatgccg ctccacactt aacccttggc ttcctggaac
     1921 tgtccataag ccaagagtcg ctgcagccgg tgctcaacga gctcatctga ggtcattcca
     1981 gccaggtggc gcagagcgtc tgctagtgct cggcgtaaca aacgtgccat gacgcgaggg
     2041 tcacgatgcg ccccgccaac aggttcattg accactcgat caatcaaccc aaagcccttt
     2101 aggcgatcgg ctgtgatcgc aagcgcttcg gcagcatctg gagccttgtc ggcgctgcgc
     2161 cagagaatcg aggcgcaacc ttctggcgaa atcactgaat aagtcgaata ttgcagcatc
     2221 aataccgtgt tggccgtggc aatggccagc gccccacccg agccaccttc gccgataatg
     2281 gtcgagataa ttggcacttt caactcggcc atggcataga tattgcggcc aatggcctcg
     2341 gactggccac gctcttcagc gccgatgcct ggataagcac ctggggtgtc aacaaacgtg
     2401 aacacaggta gacggaattt ctcagccagt ttcatgagcc ttaaggcttt gcgatagcct
     2461 tcgggtcgcg gcatgccgaa gtttctggca gcccgctctt tggtgtcacg acccttttga
     2521 tggccaagca ccatgcaagg tgagccatta aagcgagcta aaccaccgac aatcgactga
     2581 tcatcggcgt actgccgatc accgtgcaac tcatgaaagt cagtgaagat ttctcgcaca
     2641 tagtccaacg tgtatggtcg ctgcgggtgc ctagccacca aggccgtttg ccatggcgtg
     2701 agcttgccgt agatgtcctt ggctagcgtc tggctttttt gttgcagacg tgtaatctcc
     2761 tcagagatgt caacggctga gtctgcctgt acatagcgaa gctgctcgac tttttgttcg
     2821 agctcggcta gcggctgttc aaattccaaa aacgtgttgc gcatcggtct attgatatcc
     2881 ttgtcccaag cgggccattc gtcaaaagtt taacctgtta atgcagtcag tactctacgg
     2941 gtatgggatc taggcttcgc catagatacc aggtcgccac cgtacaccat ggatgccacc
     3001 cttgggccac gtcacgcgcc tcataacggg aaaccggctc accactaaag taaagcaaag
     3061 agatcgcttt taaaagcccg atatcatcga gcggcaagat gttcgggcgc tgcagattaa
     3121 aaatcagaaa catttccgcc gtccatcggc caatgccccg aatgtcggtt aactcagcaa
     3181 tcacttcctc atcggtcatg tctgaccaac gggctggacg caccaggcgg tttttaaaat
     3241 ggccagctaa atctagaatg tactcagcct tgcgcccgga cagaccgctc tgacgcaaga
     3301 catcgggtcc cgcattga
//
LOCUS       DATBNL010000432         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124800, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000432 DATBNL010000000
VERSION     DATBNL010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124800"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..1948
                     /locus_tag="VIC30_07550"
                     /pseudo
     CDS             50..1948
                     /locus_tag="VIC30_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930947.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
BASE COUNT          445 a          546 c          604 g          515 t
ORIGIN      
        1 tctgtattag actatatctc tagtccattt cctccatgtt ttatttctgc tgccaagcca
       61 cacggaactc atcagtgggg cggggggcgt catcgggtac gcctggtcat cgcttctgaa
      121 cacggctgtc ggttttacgg gcagcaccct gattctgatt gcgctactgg tggttggact
      181 gggattgttt tttgggtttt cttggttgac tgtctgtgag cgcgtcggca cctggataga
      241 gatgggtgtt ttgaaggtat atcgcactta tcaggcacgt gtcgatcgac gcgccggtga
      301 agcggcctct gctgagcgcc acgagcatgt tgataagcgt catgaccaaa ttacgcacga
      361 gcaacccgtg cgcatcgagc cggctgtggc cacggtgcct aagtctgagc gcgtacaaaa
      421 ggagcgccag caatcgttat tcctggaacc tgcttcaggc gacttgcctg ccgttggcct
      481 gctcgatgca ccgcctgaga tggttgagac ggtctcgcct gagaccattg aatttacttc
      541 acgactgatc gagaaaaagc tctcggactt tggtgtgcaa gtcactgttg tggccgccca
      601 agcaggccca gtcatcaccc gctacgaaat cgagcctgcc accggcgtta aaggctccca
      661 gatcgtgaat ctggccaaag acttggcgcg agcgttgagt ctggtcagta tccgtgtggt
      721 tgaaaccatt cccggcaaaa acctgatggg actcgagttg cccaacccca agcggcaaat
      781 ggtcaagctc tcagaaatcc tgggctcgca gacgtaccac tcaagcccat cgcttttgac
      841 catggcgctc ggtaaagaca tcgccggcaa tcccgtggtg gccgatttgg ccaagatgcc
      901 acacttgcta gtggccggca cgacgggttc gggtaaatcg gttggcatca atgccatgat
      961 cttgtctttg ttatataagg ccgatgcctc tcacacccgt ttgattctga ttgatccgaa
     1021 gatgctcgag atgagcgtct atgaaggcat cccgcatttg ttggcacccg tggtcaccga
     1081 catgcgtcaa gccgccaatg cgttgaattg gtgcgtggct gaaatggaaa agcgctacaa
     1141 gctcatgagc aagatgggtg tgcgcaacct aagcggtttt aacaccaaga ttcgtgacgc
     1201 taaaaaacgc gacgaagtca ttcccaatcc gttttcattg acaccggatg cgcccgaacc
     1261 cttgactgag ttgccagcca ttgtggtggt catcgacgag cttgccgacc tgatgatggt
     1321 ggtgggtaaa aagattgaag agctcattgc acgattggca caaaaggccc gcgctgccgg
     1381 cattcatctg gtgcttgcca ctcaacgccc gagtgttgat gtcatcaccg gcttgatcaa
     1441 agccaacatt ccaacgcgta tcgcctttca ggtgtcatct aagattgact cacgcaccat
     1501 tctcgatcaa atgggtgcag agacgctctt gggacagggt gatatgttgt acatgccctc
     1561 gggcactggg ctgccggtgc gtgttcacgg cgccttcgta tctgacgatg aggtgcaccg
     1621 tgtggttgag tcattaaagg cgcaaggtga acccaattac attgaaggct tgcttgaagg
     1681 cggcgtggcc ggtgaaaccg gcgatggcgt gggcagcgtc acgggcttta ccgatacgga
     1741 gtcagatcct ttgtacgatc aggctgtggc gattgtgttg aaacaaaagc gcgcatcaat
     1801 ttctttggtg cagcggcact tgcgcatcgg ttacaaccgt gcggcacgtc tgcttgagca
     1861 aatggagcag tctggcgtgg tttcgcccat gcaatccaat ggcaatcgcg agatactcgc
     1921 accaactggg gcgggcgatg atgcgtagtg ccttatctgt gcttgttgca acgatcactt
     1981 tctttgtatt gggggctgct tcggttgctc cagccaaggc aagcggtgct ctggacgagt
     2041 tcgagacttt cgtgcaaacc gtgtctgctg cgcgtgggac ctttaagcaa ttcactgtag
     2101 gtcctgatgg
//
LOCUS       DATBNL010000433         2687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_144834, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000433 DATBNL010000000
VERSION     DATBNL010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144834"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VIC30_07555"
     CDS             complement(<1..319)
                     /locus_tag="VIC30_07555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804271.1"
                     /translation="MARPSKYKPEFCKQAIDFMRDGYSVTAFAGKIGVSRDSVFKWAK
                     ENEEFSDALKTAQALAALWWEDALRQVALTGEGNASAAIFGVKNRSREEWRDKLEHDH
                     TSSD"
     gene            complement(594..815)
                     /locus_tag="VIC30_07560"
     CDS             complement(594..815)
                     /locus_tag="VIC30_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006395627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEY7804272.1"
                     /translation="MNDTVDKPVHYTQGKIECIDALAAATSGLSGIEAVCTGNAIKYL
                     WRWKHKGGVEDLRKARWYIGRLIEEQSNV"
     gene            complement(1313..2407)
                     /gene="dnaN"
                     /locus_tag="VIC30_07565"
     CDS             complement(1313..2407)
                     /gene="dnaN"
                     /locus_tag="VIC30_07565"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003064798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEY7804273.1"
                     /translation="MNITTTRNALLMPLSAVAGVVEKKHTLPILANVLIEQSGDDIAM
                     LATDLEIQIRTTGVARPDQSITVAARKLYDILKSLPVETEIKMTMDGDRIKVKAGKSR
                     FTLQTLPAADYPRMTLSDDDATLVRIPQHEFKRMLGQVSYAMADKDVRYYLNGLLMTA
                     HENSIRLVGTDGHRLAYTAVATQSDPAEAIAILPRKTVMELARQIPDSEDMLEIAITQ
                     NQAVFRFGTVEFASKLIDGKFPDFNRVIPRENPVMLTLDRAHLLGALSRVAILTAEKM
                     RGVRLLVDNGVLRMMSSNESSEDAQEEIEIDYAGEKMDCGFNVTYLIEVLNNAEHDFV
                     ELHLKDSQSSALITVPGDDAFKYVVMPMRL"
     gene            complement(2404..>2687)
                     /locus_tag="VIC30_07570"
     CDS             complement(2404..>2687)
                     /locus_tag="VIC30_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012436165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HEY7804274.1"
                     /translation="LQSQKGKEQHLCPLQFDIIDRLIERYTNPGDTIYDPFSGIGSVP
                     YRAVLKGRKGLGTELSPRYFVDAVHWCQAAEREMSIPDLFATFEQDEAA"
BASE COUNT          599 a          768 c          621 g          699 t
ORIGIN      
        1 cgtctgagct agtatggtca tgctcaagct tatcgcgcca ttcctcgcgg cttctgttct
       61 tgacgccaaa tatcgcagcg cttgcattgc cttcgccggt taaagcaact tgacgcagcg
      121 catcctccca ccaaagtgca gcgagagctt gcgccgtctt tagggcgtcg gaaaactctt
      181 cgttttcttt tgcccatttg aatacagagt ctcgggaaac gccaatcttc cctgcaaacg
      241 ctgtgactga atatccgtcg cgcatgaagt ctattgcttg tttgcagaac tctggtttgt
      301 acttacttgg tcgtgccatc tcttttatcc cgctttatct tgcttctgat aatacacaaa
      361 aaaaccccca acggagcgaa tcgctcgacg ttggggaaaa ggggagtcgt catcttacac
      421 aatctacgca gcgatatccg aactgagtgg cgcctggcac catcattttt cgccctgata
      481 tgggtttgac ttgcttgcaa gacttgcaca caaaggtaat ctgacttgta accccgttca
      541 tttgcttggc gttgcgctcg gtcgcagccc gatagtcttg ctctcgattg ccttcaaaca
      601 ttggattgtt cctcaattaa acgcccgata taccacctgg ctttgcgaag atcctctacg
      661 ccgcctttgt gcttccatcg ccacaagtac ttaatcgcgt tgcctgtaca aacagcttca
      721 atgcctgata acccgctagt cgcagcggcc agcgcgtcaa tgcactcgat ctttccctgc
      781 gtgtaatgca caggcttatc tacagtgtcg ttcatatctt ctccctcaaa catccggtac
      841 acgccggatc gcgcccgcgt ccatcctcga caacgtgccc acagtccaga ctgttccatc
      901 gggttgtcac cttcaccatc accggctcac gcgtcacgat atcgccacgc tggagcgttc
      961 gccatccatc ctgcacccat gcggtgcgag tcttgccacg aagatccggc cctgtcttgt
     1021 cagaatggca agagtatctc caccccgaat caaccaccat ccgaggatgc gcaacatccg
     1081 cataggcgta gtttggatca gttggcatga cgaatcctgt taaaaaacct ccttaacaca
     1141 tagctacgca caagcgacac tccggtaaat atcacgccta ttgccagatg ctcgcttgtg
     1201 ctggcgtgaa tatcgaacag cggaaacacc gccatctgcg tagcgattgc cacggtatag
     1261 ccgatcgcca cattagcgac cgactctacc gctgaccata gtctaggctg ggtcatagtc
     1321 tcatcggcat gacaacatac ttaaatgcat catcacctgg tactgtaatg agcgccgaag
     1381 attgcgagtc cttgagatgc aactcaacaa aatcatgttc cgcgttgttc aaaacctcga
     1441 tcagatacgt gacattgaat ccacaatcca tcttttcgcc agcgtaatca atctcgattt
     1501 cttcctgcgc gtcctcgctt gattcgttgc tagacatcat gcgaagcacg ccattgtcga
     1561 ccaacagtcg aacgcctcgc atcttttccg ctgtcagaat cgccacgcgt gacaatgcgc
     1621 cgagaaggtg cgcccggtct agcgtaagca tcacggggtt ttcccttgga ataacgcggt
     1681 taaagtcggg aaacttgccg tcaatcagct tgcttgcaaa ctcgactgtt ccaaaacgga
     1741 aaaccgcttg attctgggta atcgctattt cgagcatatc ctcagagtcc gggatctgtc
     1801 gcgccaactc catgacagtc ttgcgcggta ggatcgcaat cgcttcagca gggtcagact
     1861 gtgttgcgac tgccgtgtat gccagtcggt gcccatctgt tccaaccagt ctgatgctgt
     1921 tttcgtgtgc cgtcatcagc agtccgttaa ggtagtaacg cacgtcttta tcagccattg
     1981 catacgagac ttgccctagc atccgcttaa actcgtgttg cggaattctg acaagtgttg
     2041 cgtcatcgtc acttagcgtc atgcgcggat agtctgccgc cggcaatgtc tggagcgtga
     2101 aacggctttt ccctgctttg actttgatac gatcgccatc catcgtcatc ttgatttcgg
     2161 tctcgacggg tagcgacttg agaatgtcgt acagcttgcg agccgcaaca gtgattgact
     2221 gatcaggtct tgccacgcct gtcgtgcgaa tctgaatctc aaggtctgta gcgagcatgg
     2281 caatatcatc gccagactgc tcgatcagca cgttcgccag aatcgggaga gtgtgctttt
     2341 tctcgaccac tcctgccacc gctgagagtg gcatcaaaag tgcgttgcgt gttgttgtta
     2401 tgttcatgct gcttcatcct gttcaaaagt tgcgaataga tccggtatgc tcatctcacg
     2461 ttctgctgct tggcaccaat gcacggcatc aacaaagtaa cgcggtgaca attctgttcc
     2521 aagtcctttc cggcctttca gcacagcccg atacggcacc gatccgatac cagagaacgg
     2581 gtcataaata gtgtcgccag gattggtgta gcgctcaatc agccggtcaa taatgtcaaa
     2641 ctgtagtggg caaagatgct gctcttttcc tttctgcgat tgcagca
//
LOCUS       DATBNL010000434         3252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_4797, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000434 DATBNL010000000
VERSION     DATBNL010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3252
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4797"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1169)
                     /gene="modC"
                     /locus_tag="VIC30_07575"
     CDS             complement(75..1169)
                     /gene="modC"
                     /locus_tag="VIC30_07575"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015014087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HEY7804275.1"
                     /translation="MSADIAIKLALERRDFKLNVELELPGQGVTVLFGPSGSGKTTVL
                     RCVAGLECAHGLIRIGEQVWQDTAGGVHVPTWQRDLGYVFQEASLFAHLNVRQNLEFG
                     MQRGMKRSNKPDASEALSEAIELLGIGHLLNRSSGSLSGGERQRVAIARALALRPSLL
                     LLDEPLASLDQARREEILPWLERLHANLRMPVLYVTHAMQELTRLADHVVLLDTGKVK
                     LHGATDQVLSDAAFSASIGAQAGTVLQATVVGDDTAFHLTQLDLPGGQLWVTQQSLQK
                     DSQVRVHVHANDVSLAVNEPRDTSIQNRLAGVITAISADAHAAHRLVTVNCGSQALLA
                     RVTARALQDMRLEVGSRVWCQIKSVALAGH"
     gene            complement(1166..1855)
                     /gene="modB"
                     /locus_tag="VIC30_07580"
     CDS             complement(1166..1855)
                     /gene="modB"
                     /locus_tag="VIC30_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015014088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEY7804276.1"
                     /translation="MVSPISADAWQAIGLTLQLAAVTTVILLVLSTPLAWWLSQTQSR
                     WRATISALVTLPLVLPPTVLGFYLLVLLGPQGWVGQLTDWAGIGLLSFTFTGLVIGSV
                     VFSLPFAVQPIQHAFEAIGKRPLEVAATLRARPLDAFFSVALPQAKPGLLTATVLSFA
                     HTVGEFGVVLMIGGNIPGQTRVVSTQIYGYVESMQYTEAHWLAAGMVVFSFGVLLLLS
                     RLKRNGEQVMP"
     gene            complement(1897..2685)
                     /gene="modA"
                     /locus_tag="VIC30_07585"
     CDS             complement(1897..2685)
                     /gene="modA"
                     /locus_tag="VIC30_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016347671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY7804277.1"
                     /translation="MWSTWRKRVGVWTSRMAVAVALSWTAPVTAGEVAVAVASNFTAP
                     MQQIAQAFEQQTGHRVKLSSGGTGALYAQIRHGAPFDLLLAADTKIPAKLAQQGYADE
                     RTQFTYGTGQLVLWSANPTLIDGLNDSDGDILREGKFRKFAIADPMLAPYGAAAQQVL
                     QALGLWQAIKPKIVQGKNIGQAFQFVSSGNAELGLVALAQVYADGKIESGSGWIVPHE
                     LYSPIRQDAILLKPGQANPVAHELVTYLKGEQVQQIIESYGYQR"
     gene            2911..>3252
                     /locus_tag="VIC30_07590"
     CDS             2911..>3252
                     /locus_tag="VIC30_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006297188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7804278.1"
                     /translation="MTDKRIEVLRAVGQFGSISQAARATGVSYKAAWQAIETLGNLAG
                     VPLIDKAVGGSGGGGARLTSHGLALLQAADRLNEVRAVTLAQIQAETSQFDGTREHKL
                     HLSGMGLRASMR"
BASE COUNT          809 a          982 c          803 g          658 t
ORIGIN      
        1 tactgggtga tcttgcgacg accctgctca ccttccttat attgctgcac tactcttaat
       61 taccaatcca ctacctaatg cccggccagc gccactgact tgatttggca ccaaacacga
      121 gaaccaacct caaggcgcat atcttgcaac gcacgggcag tcacacgtgc gagcaatgcc
      181 tgcgagccac agttaacggt caccaaccga tgcgccgcgt gagcatcggc actgatggct
      241 gtgataacgc cggccaagcg gttctgaatc gaggtatctc tcggctcgtt gaccgctaga
      301 ctgacatcat tggcatgcac atgcactcgc acttgactgt ctttttgcag tgactgctgg
      361 gtcacccaga gctgaccgcc tggcaaatcc agctgtgtca gatgaaacgc cgtatcgtcg
      421 ccgaccaccg ttgcttgcaa aaccgtcccg gcctgcgcac cgatgctcgc agaaaacgcg
      481 gcgtcagaca gtacttgatc agtcgcacca tgtaacttga ccttgccggt atctaacagc
      541 accacgtggt ctgctaggcg cgtgagctct tgcatcgcat gcgtgacata caacaccggc
      601 attctcaggt tggcatgcaa gcgctctagc cacggcaaaa tctcctcgcg gcgcgcctga
      661 tcgagtgagg ccaacggctc atctagcaac agcaagcttg ggcgcaacgc taaggcccgc
      721 gcaatggcta cccgttgacg ttcgcccccg gataaacttc ctgaagatcg gttcaataaa
      781 tggccaattc ccaacagttc gatcgcttca gacaacgctt ctgatgcatc gggcttgttg
      841 ctgcgtttca tgccgcgttg catgccaaac tccaggtttt gcctgacatt gaggtgcgca
      901 aacaagctcg cctcctgaaa gacgtatccc agatcgcgtt gccacgtggg tacatgcaca
      961 ccgcctgccg tgtcctgcca gacttgctca ccgattcgga taagcccgtg cgcacactca
     1021 agacctgcaa cacaacgcaa gacggtagtc ttgccagagc ccgatggacc aaacagcacc
     1081 gtgacacctt ggcctggtag ctcgagctca acgttaagct taaagtcgcg gcgctcaaga
     1141 gccagcttaa tggcaatgtc agcgctcatg gcataacctg ctcaccgttg cgctttaatc
     1201 gtgacagcaa cagcaacacc ccaaaggaaa acaccaccat gccggcagct agccaatgcg
     1261 cttcggtgta ttgcatggac tcgacatagc catatatctg ggtagacacc acgcgtgttt
     1321 gtccaggaat attgccaccg atcatgagca ccacaccaaa ctcaccaacc gtgtgggcaa
     1381 atgacaggac agtcgcagtt aatagcccag gtttggcttg cggcagagcg actgagaaaa
     1441 atgcatctaa cggtctggct ctgagtgtgg ctgccacttc gagcggtcgc ttaccaatgg
     1501 cctcgaaagc atgctgaatc ggttgcacag caaacggtaa agaaaaaacc accgacccga
     1561 tgaccaaacc agtaaacgta aaagacaaca gaccaatgcc ggcccagtcg gtgagctgcc
     1621 ccacccaacc ttgaggcccg agcaatacca acaagtaaaa ccccaacacc gtcggtggca
     1681 acaccagtgg caatgtcacc aaagcactaa tcgttgcacg ccagcgcgat tgcgtctgcg
     1741 acagccacca ggccagtggc gtggacagca ccaacaaaat cactgttgtc accgcggcta
     1801 actgcaacgt caacccgatt gcttgccaag catccgcaga gatagggcta accatctcga
     1861 ctaccccatg tacgcgctgt catggctgtc tgattgctag cgttgatagc cataggactc
     1921 aataatctgt tgcacttgct caccttttaa gtaagtcaca agctcatgcg cgactgggtt
     1981 ggcttgacct ggtttcaata agatcgcgtc ttgcctaatt ggtgagtaca gttcgtgcgg
     2041 cacaatccac cctgatcctg actcaatctt gccatcggca taaacctgtg ccaacgccac
     2101 caatccaagc tcggcgttgc ctgaagagac gaattggaat gcttggccga tatttttacc
     2161 ttgcacgatt ttgggtttaa tggcctgcca aagacccaaa gcctgcaaca cctgctgtgc
     2221 ggcagccccg taaggcgcga gcatcggatc ggcaatggca aacttgcgaa acttgccctc
     2281 gcgcaaaata tcaccatcac tatcgttcaa cccatcaatc aacgtcgggt tcgcactcca
     2341 aagaaccagc tgtcccgtgc cgtaagtgaa ctgcgtacgt tcatcggcat acccctgttg
     2401 tgcaagcttg gcaggtatct tggtgtcagc tgcgagcagc agatcaaaag gcgcaccgtg
     2461 tctaatttgg gcatatagag cacctgttcc tccagacgag agcttgacgc ggtgaccggt
     2521 ctgctgctcg aacgcttgcg caatctgttg catgggtgcc gtaaagttag acgccaccgc
     2581 cacagcaact tcgcccgcag tgactggtgc cgtccaggac agagcgacag caaccgccat
     2641 gcgacttgtc caaacaccca cgcgcttacg ccatgtagac cacatatcaa cgtctctata
     2701 tgataaaaag gcaaaacgaa atctatcacg ttattctatt tttgaatagc gatagggagt
     2761 cacagccaaa ggtcataact gagagtcaca actgcggatc acaaaataga acactcgacg
     2821 ttgcctctct aaccactcgc agcacctgtc atgaatcaac acccgtcatc gcccgcgaaa
     2881 gtcgccatcg agcaagcact gtcaagcacc atgaccgaca agcgcattga agttttgcga
     2941 gccgtggggc agtttggctc tatctcccag gccgctcgcg ccaccggcgt cagctacaaa
     3001 gccgcctggc aagcaatcga gacgctaggc aacttggccg gtgtaccact gatcgacaaa
     3061 gccgtcggtg gcagcggcgg cggcggtgcc cgcctgacaa gccatggctt ggcgctgctg
     3121 caggcagctg accgattaaa cgaggtcaga gccgtcactt tggcacagat tcaggccgaa
     3181 acatcgcagt ttgacgggac gagagagcac aaacttcact taagcggcat gggcttgcgc
     3241 gccagcatgc gc
//
LOCUS       DATBNL010000435         3614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_75086, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000435 DATBNL010000000
VERSION     DATBNL010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3614
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75086"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VIC30_07595"
     CDS             complement(<1..993)
                     /locus_tag="VIC30_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015865721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7804279.1"
                     /translation="MHAAQVMNLSQLLAQTAKLHPQRPGVIRGDDVWHWREIDDRVNA
                     LCQAFTDLGVVKGDRILTQSRNCLQTLELAWVAFRLGCVWVPTNFRLTPDEVAYLGAS
                     SGASVMVYEDVFADHVDAVQKAFDDIRLVVSIGTARPGEHSYEALASKYVGCEFTPAD
                     VSENDPCWFFYTSGTTGRPKAGVLTHGQMAFVVTNHLADLIPGTNEFDVSAVVAPLSH
                     GAGIHMLLNVARGAANVLMPSEKLDAEVFWQLVEKHRVTNVFTVPTIVKVLVEHPAVD
                     QYDHSSLKFMIYAGAPMYRADQKLALQKLGRVLVQYFGLGEVTGCITVLPPHMHS"
     gene            complement(995..2161)
                     /locus_tag="VIC30_07600"
     CDS             complement(995..2161)
                     /locus_tag="VIC30_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013235760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEY7804280.1"
                     /translation="MTTPMIVGWGHTKFGKHDAVDIEALIREAGMAAIESSGFDVTDI
                     DGVFVGTFNGGFVPQDFAGAMVGVAIPELRHVPAARLENACATGSAAIYSAMDAMLAG
                     RMKRVLVVGYEKMNTLPNAQIGEVLLKCSYVKEEADIPAGFAGVFGEIASAYFEKYGD
                     QSDALATIAAKNHKNGVDNPFAHLQRDLGFDFCRNVSEKNPIVAGPLKRSDCSLVSDG
                     AAAVVLSLDQSGSAAVPAIKWLSRTQVNEWLPMSRRDPTRFEGAAMAWQKGLADAGVG
                     LDGLSFVETHDCFTIAEMLEYEAMGLAPQGQGARVALDGMTAADGKLPVNRSGGLKSK
                     GHPIGATGVSMHVMAAMQLSGTAGDMQLPGAKRGAVFNMGGTSVANYLSILQAV"
     gene            2566..3336
                     /locus_tag="VIC30_07605"
     CDS             2566..3336
                     /locus_tag="VIC30_07605"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEY7804281.1"
                     /translation="MQQKDLHALQEGVLSRLQSMNDEQFGRAKLCGGTALSRCWLEHR
                     VSYDLDFFLPNGPENGFNVMDLAVAIKQAGISFETRDLVQDDHKANQLHGDVLHEGKR
                     LKVSFIEDAYFELYPSVLKPFGQLTVQTEEIPGLYHRKLRTVAGHGLGEEPDSFTGGR
                     QKARDLFDLYVLSVKHMPLMDFIDSLPYPFPTGSFINGLVSMPWLELIDELEELISAP
                     QWSQAKDVAFLRDSLYAQIGAETVPDDDETDLPGQAPS"
     gene            3333..>3614
                     /locus_tag="VIC30_07610"
     CDS             3333..>3614
                     /locus_tag="VIC30_07610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804282.1"
                     /translation="MKQRAIEPWEVVSKKAYWDRDVDLQKWRDRVAAGHRSYLPDAIK
                     VMHPREFIHFYGKKAFVLDWPRLRALLPKDIHRHCPFYDVFWSQLAGGGY"
BASE COUNT          894 a         1022 c          902 g          796 t
ORIGIN      
        1 tgagtgcatg tgcggtggta acaccgtaat acagccagtt acctcaccca acccaaaata
       61 ctgcaccaag acgcggccaa gcttctgtaa ggcaagtttt tgatcggccc ggtacatggg
      121 tgccccggcg tagatcatga atttgaggct actgtgatcg tattgatcaa ccgccgggtg
      181 ctcaacgagc accttcacga tcgtgggtac agtaaagacg ttggtcactc ggtgcttttc
      241 taccaactgc caaaagacct cagcgtcgag tttttctgat ggcatgagca cattggccgc
      301 cccacgggcg acattgagca acatgtgaat accggcacca tgtgacagtg gcgcgaccac
      361 ggctgagaca tcaaactcat tggtgcccgg aatcaaatcg gccaagtgat tggtgacgac
      421 gaacgccatt tgcccgtgcg tcaacacccc agccttgggc ctgcccgtgg tacctgatgt
      481 gtaaaaaaac cagcatggat cgttttctga aacatcggcc ggtgtgaact cacagcctac
      541 gtacttgcta gcaagcgcct cgtagctgtg ctcacccggg cgtgctgtcc caatcgagac
      601 caccagtctg atatcgtcaa acgccttttg taccgcatcg acatgatcag caaacacatc
      661 ttcatagacc atcaccgagg cgccgctact cgcccccaaa tacgccactt catctggcgt
      721 taaccgaaag ttggttggca cccatacgca gcctaaacga aacgccaccc atgccaattc
      781 cagtgtttgc aggcaattgc gcgactgcgt gagaatccgg tcacctttga ccacaccgag
      841 atccgtgaat gcctgacaca gtgcattaac tcgatcatcg atctcgcgcc agtgccagac
      901 gtcgtcacca cgaataacgc ccgggcgttg ggggtgcagt ttggccgtct gagccagcag
      961 ctggctcagg ttcatcactt gtgcagcatg catctcaaac cgcctgcaag atgctcaggt
     1021 aattggccac agaggtgcca cccatgttga acaccgcacc gcgtttggca ccgggtagtt
     1081 gcatgtcacc ggctgtgcca gacaattgca tcgcggccat gacatgcatc gacacgccgg
     1141 tggcgccaat cggatggcct ttggacttca agccgcccga acgattgacg ggcaacttgc
     1201 catcagcggc cgtcatgcca tcaagcgcca cacgtgcacc ctgaccttgg ggtgccaacc
     1261 ccatggcttc gtattccagc atttccgcta tggtgaaaca atcatgcgtt tccacaaaac
     1321 ttagcccatc caaaccaaca ccggcatcag ccaagccctt ttgccaggcc atggcagcgc
     1381 cttcaaagcg ggttggatcg cgtcggctca tgggtaacca ttcattgact tgggtgcgcg
     1441 agagccactt aatggcaggc actgcggccg agcccgactg atccaacgac aacacaacag
     1501 cggctgcccc atcagagacc aatgagcagt ctgaacgctt taaggggccg gccacaattg
     1561 ggttcttctc tgacacgttg cgacaaaaat caaaccccag gtcacgttgc aagtgggcaa
     1621 acgggttgtc aacaccgttt ttgtggttct tggcggcaat cgtggcaagt gcatcggact
     1681 gatcaccgta cttctcaaaa tacgcgctcg caatttcacc gaacacgcca gcaaagcctg
     1741 ctggaatatc ggcttcttcc ttgacgtagg agcacttgag caacacctca ccgatctggg
     1801 cattgggcaa ggtgttcatc ttctcgtagc caaccacgag cacacgcttc atgcgcccag
     1861 ccaacatggc atccatggca ctgtaaatcg cagccgaccc cgtggcgcaa gcgttttcta
     1921 ggcgagctgc cggcacatga cgcaattccg ggatcgcaac acctaccatg gcaccggcga
     1981 agtcttgcgg cacaaacccg ccgttaaacg ttcctacaaa cacgccgtca atgtcagtga
     2041 catcaaagcc ggacgattca atggccgcca tgcctgcttc acggatcagc gcttcgatat
     2101 caacggcatc gtgtttaccg aacttggtgt ggccccagcc aacgatcatg ggtgtggtca
     2161 tgtcttcccc ttagtttttt gaatatggtt tgatgccaca gcaatagcaa caaacaatgg
     2221 tctgcaaaac gccctgcaaa acaccctgca aaacgttcca caaaagatac cacttggcac
     2281 gcaatcgagc gtgccaacta gccgctgtat cgaaatgcgc ccgaagtgtc ttacacaaag
     2341 tgtctcaatg gtagcgcgac gcgcatgtag gtgggaatca aacatgagca gcaaaccatc
     2401 tactttcagc gtttcaccgg tcacgtgccg cccaaacaaa acaaggctac ctaaaaggca
     2461 gatggaaata ttggtgtatt gatggtgctt tgatggtgcg gttttggcgt attattgtta
     2521 ccatatgaca tatatgtcaa atttatattt agcaaggaag tattcgtgca acaaaaagat
     2581 ctacacgctc tgcaagaagg cgtcttaagc cgtctacagt caatgaatga cgaacagttc
     2641 ggacgtgcca agctgtgcgg tggcacggct ttgtcacgct gctggcttga gcaccgggtg
     2701 tcctacgacc ttgatttttt cttgccgaat gggccagaga atggattcaa cgtaatggat
     2761 cttgctgttg cgatcaagca ggcgggcatt tcgttcgaga cccgtgatct ggtgcaagac
     2821 gatcacaaag ccaatcaatt gcacggcgat gtgcttcacg agggtaaacg actcaaagtc
     2881 tcgttcattg aggacgcgta ttttgagcta tatccgagcg tattgaagcc ctttggccaa
     2941 ttgacggtgc aaactgaaga aatcccgggc ctttatcacc gcaagctgcg cacagtggcg
     3001 ggtcatgggc taggcgaaga gcctgactcc ttcaccggcg gcagacaaaa agcgcgagac
     3061 ttgtttgact tgtacgttct ctcggtcaag cacatgccac taatggattt catcgatagc
     3121 ctgccctacc catttccaac cggctcattc atcaacggat tggtcagcat gccttggttg
     3181 gaactaatcg atgagcttga agagttgatt agtgcaccac agtggtcaca agccaaagat
     3241 gtggcgtttt tgcgcgattc tctttatgca caaatcggtg ctgagaccgt tcccgacgat
     3301 gacgaaaccg acctccccgg tcaagcgcca tcatgaaaca acgagcaatc gaaccatggg
     3361 aagtcgtcag caaaaaagcc tattgggatc gcgatgttga tctacaaaag tggcgtgacc
     3421 gcgttgccgc tggccaccgg tcctatctgc cagatgccat caaagtcatg cacccgcgag
     3481 aatttatcca tttctatggc aaaaaagcat tcgtgctgga ctggccaaga ttgcgagcgc
     3541 tgctacctaa agacattcac agacactgcc ccttctacga cgttttttgg agtcaattgg
     3601 caggcggcgg ctac
//
LOCUS       DATBNL010000436         2454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154781, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000436 DATBNL010000000
VERSION     DATBNL010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154781"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VIC30_07615"
     CDS             <1..440
                     /locus_tag="VIC30_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006226177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY7804283.1"
                     /translation="WLQTGQDDVGRPIVMLDTRNDFEVQAGTFKDAINWHIERFTQFP
                     EAAQEHMNELEGKTVVSFCTGGIRCEKAAIYMQEIGVKNIYQLDGGILQYFEDTDGYG
                     FEGNCFVFDERETLDTDLHEAHLHGQPPGDQVEEGNKKEGNES"
     gene            565..2106
                     /locus_tag="VIC30_07620"
     CDS             565..2106
                     /locus_tag="VIC30_07620"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HEY7804284.1"
                     /translation="MRRDLRPRKTRTASGATAVQVVRYEGKRRTVVKHIGSARDEDAL
                     AVLLSEAEQYIQSHDAQPSLFAASEPPSQLVDLSKLRLVGVTHTYARRALLACADLCG
                     LGELPVLYRDLALMRIIEPASKLQTIELLNQYFEVPYAERTVYRLLPKLITHQRAIET
                     AAIDLARQDLKDSFSLVLYDVTTLYFESFKEYDFQKPGFSKDNKPQQPQIVIGLITTR
                     SGFPVMHEVFEGNTFEGHTMLEILKRFQQRVGEHCKPVIVADAAMLSASNMQTLDEQG
                     YRYIVGARLANSAKTFVDQIEAQLPRSDGAMARFKHTLRKGALKTEVDVICHYSEARY
                     KKDRREFDKQVARALALLERNEPGRRAKFVKKADDKKIFEFNADLKAKAERLLGIKGY
                     VTNIAQSELSNQDIMDYYHDLWHVEQAFRMSKSDLQARPIFHRTEDAIRSHVLVCFMA
                     LMMGKYLEIKTGASIKQIRKQLWQVHEAHLLNEITGKTHIVQMDPRQLGNPQLIDLLE
                     PNKTH"
BASE COUNT          616 a          625 c          644 g          569 t
ORIGIN      
        1 gttggcttca gactggccaa gatgacgtcg gccggcctat tgtgatgctc gatacgcgta
       61 atgatttcga ggttcaagcg ggcacattca aagacgccat taactggcat atcgaacgat
      121 tcacacagtt ccctgaggcg gcgcaagagc acatgaacga gctcgaaggt aaaaccgtgg
      181 tgagcttttg tacaggtggc attcgctgcg agaaagcggc catttacatg caagaaatcg
      241 gtgttaagaa catttatcag cttgatggcg gtatcttgca gtattttgaa gacactgatg
      301 ggtatgggtt tgagggtaac tgttttgtgt ttgatgagcg tgagacgtta gacaccgatc
      361 tgcacgaggc gcatctccat gggcagccgc caggcgatca agtcgaagag ggcaacaaaa
      421 aagaaggcaa cgaaagctga gccggctctc ctgacttctg ccaactccca caagaatcat
      481 tgagtcggcg gaaatagtct ttatatttca ttgggttggg tttttttggt gcgagataaa
      541 acgcactaat gctatcttcg cgtcatgcga cgcgatctcc gaccccgcaa gacacgaacc
      601 gcctctggcg ccactgctgt tcaagtggtg cgctacgagg gcaagcgtcg cacggtggtc
      661 aaacatatcg gcagtgcccg tgatgaggat gctttagcgg ttttgctgtc tgaggctgag
      721 cagtacatcc agtcacacga tgcacagcca agtttgtttg ctgcgtcaga gccaccaagc
      781 cagttggtcg atttgtcgaa gctgcgcttg gtgggcgtca cacacacgta tgcacgccgc
      841 gcgttgttag cttgtgctga tttatgcggt ttaggcgagc tgccggtgct ttaccgtgac
      901 ttggcgctta tgcgcatcat cgagcctgcc tctaagttgc agacaattga acttctcaat
      961 cagtactttg aggtgcctta tgctgagcgc accgtctatc gcttgctgcc caagctgatc
     1021 acgcatcagc gtgccatcga aacagccgcc atcgacctgg cgcgtcagga tctaaaagac
     1081 tccttcagtc tggtgctcta tgacgtcacc accctgtact ttgaatcgtt taaggaatac
     1141 gacttccaga aaccaggctt ctctaaagac aacaagccgc agcagccaca gattgtcatt
     1201 ggcctgatca ccacccgatc tgggtttccg gtgatgcacg aggtgtttga aggcaacacc
     1261 tttgaggggc atacgatgct ggagattctg aaacgattcc agcaacgggt gggcgagcac
     1321 tgcaagcccg tgattgtggc cgatgcggcc atgctctcag cgtcgaatat gcaaacgcta
     1381 gacgaacaag gctatcgcta catcgtgggc gcaagactag ccaatagtgc caagacgttt
     1441 gttgaccaga tagaagcgca attgccacga agcgacggtg ccatggcacg gtttaagcac
     1501 acgctgagga aaggagccct taaaaccgaa gtcgatgtca tttgccatta ttctgaggcg
     1561 cgctacaaaa aggatcggcg cgagttcgac aagcaagtgg ctcgcgcact ggcgctgcta
     1621 gaaagaaacg agccagggcg gcgggccaag tttgttaaaa aagccgatga caaaaagata
     1681 ttcgaattca acgccgacct gaaggccaag gccgagcgac tacttggcat caaaggctac
     1741 gtcaccaaca ttgcacaaag cgaactcagc aaccaagaca tcatggatta ctaccacgac
     1801 ctctggcatg ttgagcaggc gtttcgaatg agcaaatccg atctgcaggc tcgacccatc
     1861 ttccatcgaa ccgaagacgc gatccggtct catgtactcg tttgtttcat ggcgctaatg
     1921 atgggcaagt atctagaaat caaaaccggg gcctcgatca aacagattcg caagcagcta
     1981 tggcaagtcc acgaggctca cttgctcaat gagatcaccg gaaaaacgca catcgtgcag
     2041 atggatcccc gacagctagg gaatccgcaa ttaatcgatt tgctggagcc gaacaaaacg
     2101 cactaaatgg cagaactcag gagtttggtg tctctgaggg gatggtctta tcagccagtc
     2161 atgccgatga aaaagcccat cctggtattt ttgtcatcga accatcgact ggctctgtac
     2221 ctggcatgaa aattcgctag ctgaccttta actaacggct aactcaccgc taattttcgg
     2281 ctaataccca taaaaaagcc taacttcttt cttcatgctc acgctgtgat acacgcggtg
     2341 tgagcatggg ctgaggccag ttcagctttc gttgccttct ctttcgttgc cttcctcgac
     2401 tttatcgcct gatggctgcc tatcgagatg tgcctcgtgc agatcggtgt ctac
//
LOCUS       DATBNL010000437         3415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_55025, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000437 DATBNL010000000
VERSION     DATBNL010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55025"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1070
                     /locus_tag="VIC30_07625"
     CDS             <1..1070
                     /locus_tag="VIC30_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005018048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEY7804285.1"
                     /translation="PDQGSDAQSEGYVGLIRNFVRHSWLLMYLFGASPAVSTNFLRGD
                     LDHGLQTLNPTTAYLPWATSLRMSDLGYQSKAQATLKLCYNDLPTFLDRLYTAVTTPW
                     PDYEAIGTQRDGQWLQLNCNLLQIENEYYSTIRPKRTTGRGERPITALAERGVQYIEV
                     RCLDIDPFEPAGISSQTIKFMDAFLLFCALEHSPSFGDDGYCVESAQNFNAVVARGRQ
                     PGLSLYRGGVPVGLDEWATSVLAKVADCADLMATQLGDASYREAVNVQQHKVDDVSCT
                     PSAQVLAALDQGRSFHEFGLKTSQAHTEHFRAAGLTAQEQQMADQMREQSLSEQASIE
                     ASDTVSFAQYVADFDAALKAP"
     gene            complement(1114..1188)
                     /locus_tag="VIC30_07630"
     tRNA            complement(1114..1188)
                     /locus_tag="VIC30_07630"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1153..1155),aa:Arg,seq:ccg)
     gene            1308..2249
                     /locus_tag="VIC30_07635"
     CDS             1308..2249
                     /locus_tag="VIC30_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7804286.1"
                     /translation="MSNTPEKQETVHAEEHEMLIKTPKQLIVTVVLSFIIPVVGIILL
                     ANWVSRGDRPAAGSDALSEEAIALRIAPVAKLELVDASAPAEVRSGEQVYAMACAACH
                     DAGVAGAPKFADQVAWAGPIGTGLESMTNNVINGKGAMPARGGNPNLTDPELQNAVIY
                     MANAAGGDFSAPADGASAEAPAAPAEPAQQVASALEAEAKEAGTDAGAPKLEEATTNT
                     PEQLAAAEAEPANVDLALGEKIYNQACMACHVAGVAGAPKFGDKAQWAPVIATGMDAM
                     ISSVINGKGAMPARGGLAGASDKDLAAAVHYMVNAAQ"
     gene            complement(2358..>3415)
                     /locus_tag="VIC30_07640"
     CDS             complement(2358..>3415)
                     /locus_tag="VIC30_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7804287.1"
                     /translation="LRSDPAVGDALMTLSHSMGHTPVRAKDMPGFIVNHAGRGFGTEG
                     FRVVQEGVTDYVTVDDIMRDQCGFRMGPFELMDLTGLDVSHAVMESVYRQFFDETRFR
                     PSPLGSVRVAAGLYGRKSGGGFYEYIDGRKKESALPTVPDVTDWPSVWVSPAHEHGHQ
                     MAMGLFNALGATIQTGSRPNPEDLIVVTPFGEDVSTLVAAQRLDASRTVGVDTFGSVQ
                     PARRRTLMVSPATRPAWRDKAHALLARDQVAVSVIHDSPGFVAQRVLATIVNIASDIA
                     QQQIASPSDIDRAVTLGLNYPAGPLSLGDSLGSARVLEILNNLQAVTGDMRYRPSLWL
                     KRRVQLGMSLLQASATE"
BASE COUNT          811 a          977 c          900 g          727 t
ORIGIN      
        1 ttcctgatca aggctcggat gcgcaatctg aaggctatgt cggtctgatt cgcaattttg
       61 tgcgtcatag ctggctgttg atgtacctat ttggcgcctc gccggcagtc tcgaccaatt
      121 ttttgcgggg cgatctcgat cacggtttgc aaacgcttaa cccaaccaca gcttacctac
      181 cttgggcgac cagtctgcgc atgagcgatc ttggctacca aagcaaagcc caggccacgc
      241 tcaagctttg ctacaacgac ttaccaacgt ttcttgatcg cctctacacc gcagtcacaa
      301 cgccttggcc cgattacgag gccattggta cccagcgcga cggccagtgg ttgcaactca
      361 attgcaactt gctgcaaata gagaacgaat actactcaac gattcgtccc aaacgtacca
      421 ccgggcgtgg tgagcgcccg attacggcgc ttgcagaacg cggcgttcag tacattgaag
      481 tgcgttgcct tgatattgac ccgttcgagc cagccggtat ttcatcgcaa accattaaat
      541 tcatggatgc gttcctgttg ttctgtgcgc ttgaacacag cccttccttc ggtgacgatg
      601 gctactgcgt tgagagcgca caaaacttta atgccgtggt ggcgcgtggg cgccagccag
      661 ggttgtctct ctaccgggga ggcgtacccg ttggcctaga tgagtgggct accagcgtct
      721 tggccaaagt cgctgattgc gctgatctga tggccaccca gcttggtgac gctagttatc
      781 gggaggcggt caacgttcaa caacacaaag tcgatgacgt ctcatgcacg ccttcagccc
      841 aagtgttggc agcgcttgac caaggacggt cgtttcacga gttcggctta aaaacctcgc
      901 aggcacacac cgagcacttc agagcggctg ggctgacagc acaagaacaa caaatggccg
      961 atcagatgcg tgaacagtcc ctgtcagaac aggcatccat tgaagccagt gacacggtct
     1021 cgtttgcgca gtacgtagcg gattttgatg cggcgcttaa agcaccatga tgacaaaaca
     1081 ccacaccgca aaaccagcat tttgggcatg aattggcgcg cccgacagga atcgaacctg
     1141 tatcgagagc ttcggaaact ctaattctat ccattgaact acgggcgcgt gggtgtcatt
     1201 atacgcacag cgctagattg atctaacgca aggcaaatgg tgttttttta gtcattgccg
     1261 ctataatccg aaaaattttt gcgattgcta attatttagg gcatcacatg agtaatacac
     1321 ctgaaaaaca agagactgtg cacgccgaag agcacgagat gttgattaag acccccaaac
     1381 aactgatcgt cacggttgtc ctgtcattca ttattcctgt ggtgggcatt attttgctgg
     1441 ccaattgggt gtctcgcggc gaccgtccgg ccgctggctc cgacgctttg agcgaagagg
     1501 ccattgcctt gagaattgca ccagtggcca aacttgaact cgttgacgcc agtgcgccgg
     1561 ccgaagtacg cagcggcgag caggtttacg ccatggcctg tgctgcctgt cacgatgccg
     1621 gtgtggcggg tgcgcccaag tttgcagacc aagtggcttg ggcaggcccc atcggcactg
     1681 gacttgagtc catgaccaac aacgtcatca acggcaaagg tgccatgcct gcacgcggtg
     1741 gcaaccccaa cctgaccgat cccgagcttc aaaacgccgt gatttatatg gccaatgccg
     1801 ctggtggtga tttctcagcg cctgcagatg gtgcgagtgc cgaagcaccc gctgcgcccg
     1861 ctgaacctgc ccaacaagtg gctagcgcat tggaagcaga agccaaagag gccggtaccg
     1921 atgccggcgc accaaaattg gaagaagcca ccaccaacac gcccgagcag ttggctgccg
     1981 ctgaagccga accggctaac gttgacttgg ctctcggtga aaaaatctat aaccaggcgt
     2041 gcatggcttg ccacgttgct ggagtcgcag gtgcaccaaa atttggtgac aaagcacaat
     2101 gggcaccggt aattgccacc ggcatggatg ccatgatctc gagcgtcatt aatggcaaag
     2161 gagccatgcc tgcccgaggt ggtctggcag gtgctagcga caaggacttg gctgctgctg
     2221 tgcattacat ggtcaacgcc gcacaataac aacctggtac gcatagaacc aacaacaact
     2281 aaccgttgtt attcaaaata aagccgcaca tcagtgcggc tttattgttt tatgtgaccc
     2341 tttgattccc aacacactca ttcagtggct gaggcctgca gcagtgacat gcccaattgc
     2401 acacggcgtt taagccacag gctcggtcga tagcgcatat cgccggttac cgcctgaagg
     2461 ttgttcagga tttcaaggac ccttgcacta cctaggctgt cgcctagtga caatggacca
     2521 gccggataat tcaaccccaa tgtaaccgcc cgatcgatat cgcttgggct cgcgatttgc
     2581 tgctgagcaa tgtcgctggc gatgttcacg atcgtagcca gcacccgttg tgcgacaaac
     2641 ccgggcgagt catgaatcac gctgactgct acctgatcac gcgcgagcaa cgcatgcgcc
     2701 ttgtcacgcc atgccggccg tgtggcaggg ctcaccatga gcgtgcgtcg acgggcaggc
     2761 tgaacactgc caaaggtatc aacaccgacg gtgcggcttg cgtctagacg ctgcgcagca
     2821 accaaggttg agacatcctc accgaatggc gtgaccacga tcaggtcctc tgggttagga
     2881 cggctaccgg tttggatcgt ggcaccaagc gcattaaaca atcccatggc catctgatga
     2941 ccgtgctcgt gagccgggct aacccaaacg gaaggccaat cagtaacgtc aggcacggtg
     3001 ggcaatgctg actctttttt gcgaccatcg atgtactcgt aaaacccacc accactttta
     3061 cggccataaa gaccggcagc cacccgcacc gaaccgagag gcgacggtct aaaccgtgtc
     3121 tcatcaaaaa attggcggta caccgattcc atgaccgcgt gtgagacatc tagtccggtg
     3181 aggtccatga gctcaaatgg ccccatacga aacccgcact gatcacgcat gatgtcatcg
     3241 accgtcacat agtcggtcac accctcttgc accacccgaa acccctctgt cccgaaacca
     3301 cggccagcat ggttaacaat aaatccaggc atgtccttag cgcgcaccgg cgtgtgaccc
     3361 atgctgtggc tcaacgtcat caatgcatcg cctacagccg ggtctgaacg caagc
//
LOCUS       DATBNL010000438         5144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174304, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000438 DATBNL010000000
VERSION     DATBNL010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174304"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VIC30_07645"
     CDS             <1..671
                     /locus_tag="VIC30_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEY7804288.1"
                     /translation="IEVSAFTFMALLIAQEGTTVTGGHQITSNLAAFCYMMPLAIGIA
                     TAAQTAQAIGAGDQALAHRTGMTGLAVAFGGALTTAGVLFFAREQIVALYTSDPAVTS
                     IALSMLVILPFFHIIDAMHCANVYLLRAHKIAMVPLIFQTLTLSIIGLGGGWYFGFGP
                     GRGVLEPLRQWIMPNAPAGAGTMWLMAGLGLATSGVLLYSWYRRIVLAKLKTHHSMKE
                     TAVN"
     gene            complement(694..1245)
                     /gene="orn"
                     /locus_tag="VIC30_07650"
     CDS             complement(694..1245)
                     /gene="orn"
                     /locus_tag="VIC30_07650"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018574669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEY7804289.1"
                     /translation="MRLVWLDMEMTGLDPEKERIIEVAAVVTEPDLTVVAESPVLVVH
                     QSDEVLGAMDKWNTSTHGKSGLIDKVKASTLTEEQAEQQMLAFLTEHVAPGKSPLCGN
                     SVSQDRRFMYRYMPALEQFFHYRTIDVSTLKELARRWRPALLKGFTKQSKHEALADIY
                     ESIDEMRYYREHFIRLEGESSVS"
     gene            1449..2702
                     /locus_tag="VIC30_07655"
     CDS             1449..2702
                     /locus_tag="VIC30_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY7804290.1"
                     /translation="MQASILTTLFLLFLGSNAIVRIWLAQRQMRHVQAHRDAVPAEFA
                     DRISLRSHQRAADYTTERTRLRIIESVFDVGVLLVLTMGGLLGAIYTAIDGWFTSALL
                     RDIAVIAGVVLLLGVLHVPFTLYRQFGLEQKYGFNRMTPKLFVIDSIKGLLVGAVLGL
                     PLLALILWLMNSASAAWWIWAWASWAAFNFAVMLIFPTWIAPLFNKFTPLQDVALKDR
                     IDALAKRCDFAIQGLFVMDGSKRSAHGNAYFTGFGKSRRIVFFDTLLSKLSPTEIEAV
                     LAHELGHFKHKHIVKRLAMSLVGSLLMFALLGWLSQQAWFFTGLGVTPLASGNNGMAL
                     LLFFLVMPVFTFMLTPLTSWLSRRDEFEADRFAASQSQASDLVSALVKLFNDNAATLT
                     PDPVHSAFYDSHPPATIRIQALSAA"
     gene            2699..3598
                     /gene="rsgA"
                     /locus_tag="VIC30_07660"
     CDS             2699..3598
                     /gene="rsgA"
                     /locus_tag="VIC30_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEY7804291.1"
                     /translation="MTEPTVRGRVIGAHGRHYSVELSSGELKHCFPKGKRNEAAVGDW
                     VQVQLQGENEGHLAAIEPRQNLLYRSDEWRSKQFAANVDQLFVVVAVKPTFSDDLLGR
                     ALTGAWAADIEPVIVLNKTDITDGLAAARDKLKPYKDLGVNIIEVSALDADTVKKTLA
                     PLLTHKTTLLLGQSAMGKSTLLNALVPQAKASTQEHSQALDAGKHTTTTTHLYHLPAI
                     DGDLIDSPGVQAFGLAHLGLQDIEHGFPEFAAHKVHCRFYNCSHRREPNCGVLDALAR
                     GEIDARRHALYLRLLDENANAKT"
     gene            complement(3556..4191)
                     /locus_tag="VIC30_07665"
     CDS             complement(3556..4191)
                     /locus_tag="VIC30_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEY7804292.1"
                     /translation="MPGDILQVDFVRQVLARSIHEPLHLPDAFATRYMEVNTQAIEAA
                     VLVPLVMRQNGITVLLTQRTDHLYDHAGQVSFPGGRVETTDVDPIATALRETHEETGL
                     APEHVNVLGHLPRYYTGTGFAVTPVTGLVMPTFTLAPDEFEVAEVFEVPLSFLTEPGN
                     YRLHCATLSDGSTRHYYSVPWEGYFIWGATAAMLHGLYQVLALAFSSSSRK"
     gene            complement(4512..4886)
                     /gene="rplS"
                     /locus_tag="VIC30_07670"
     CDS             complement(4512..4886)
                     /gene="rplS"
                     /locus_tag="VIC30_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEY7804293.1"
                     /translation="MNLIAQIEQEEIARLTDGKPLPEFAPGDTLVVNVNVVEGNRKRV
                     QAYEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIASIEVKRRGDVRRAKLY
                     YLRQRSGKSARIKEKLVRRNPA"
BASE COUNT         1174 a         1432 c         1312 g         1226 t
ORIGIN      
        1 tcattgaagt tagcgccttc acgtttatgg cgttactcat tgcacaagaa ggcaccaccg
       61 tgaccggtgg tcaccagatc acctccaacc tagcggcatt ttgttacatg atgccactag
      121 ccatcggcat cgccacagct gcccaaaccg ctcaagccat tggtgctggt gatcaggcgt
      181 tggcacaccg caccggcatg accggtttgg ccgtggcctt tggtggcgca ttgaccaccg
      241 cgggcgtgct gttttttgcg cgcgaacaaa tcgtggcgct atacacgagc gacccggctg
      301 tcaccagcat cgccttatcg atgctggtga ttctaccgtt tttccatatc atcgatgcca
      361 tgcactgcgc caacgtctat ctgttgcgcg cccacaaaat cgccatggtg cccttgatct
      421 ttcagaccct gaccttgtca atcattggtc taggcggtgg ctggtatttt ggatttggtc
      481 caggacgtgg ggtgctcgag ccactgcgcc agtggatcat gcccaatgcg ccagccggcg
      541 ctggcaccat gtggttgatg gccggtctgg gtctggcgac ctcgggcgtg ttgctctaca
      601 gctggtatcg acgcattgtc ctggccaagc ttaaaaccca tcactctatg aaagaaacag
      661 ccgttaactg accacccgtt aactgaccac cactcaacta acagatgact cgccttcaag
      721 acgaataaag tgttcccggt agtagcgcat ctcgtcgatg gactcgtaaa tatcagccaa
      781 cgcctcatgc ttactttgct tggtgaagcc cttaagtaat gctgggcgcc aacgacgtgc
      841 caactccttt aacgtgctga catcaatcgt ccggtaatga aagaactgct caagcgccgg
      901 catgtaccga tacatgaagc ggcgatcctg actgaccgag ttgccacaca acggcgattt
      961 gcccggtgcc acatgctcgg ttagaaacgc caacatttgc tgctcggcct gttcttcggt
     1021 caaggtggac gctttcactt tgtcgatcaa ccccgatttg ccgtgggtcg acgtgttcca
     1081 cttgtccatg gcgccaagca cctcatcgga ttggtgcacc accaacacgg gtgactcagc
     1141 aaccacggtc aagtcaggtt ctgtgaccac ggcggctacc tcaatgatgc gttctttttc
     1201 tggatctagc ccagtcatct ccatatcgag ccagaccaat cgcatctcat tgcgcgcagc
     1261 cgctgattta ccagccctgc ccttatcccc attgtctttg tgtgtttgaa cgttatctgc
     1321 agccatggga gaacctataa tcaatgaaac tgtctgattc aaacagacaa gggcaacatg
     1381 tcagcattgt tttgctagtc atgtttcaaa cctgctgtct gaacaacctt agatatcgat
     1441 tgtcgcatat gcaagcttcc atactgacca cactgttttt attgtttcta ggtagcaacg
     1501 ccattgtgcg catttggtta gcgcaacgac aaatgcgtca tgtgcaagca caccgcgatg
     1561 ccgtccccgc cgagtttgca gatcgcattt ccctacgaag ccaccaacgg gcggctgact
     1621 acaccaccga acgcacgcgg ttgcgcatca tcgaaagtgt gtttgatgtc ggggtacttc
     1681 tagtactcac catgggcggc ttacttggtg cgatatatac cgccattgac ggctggttta
     1741 ccagcgcatt actgcgcgat atcgcggtga tcgccggggt cgtcttgttg ctcggtgtct
     1801 tacatgtgcc atttacgttg tatcgtcaat tcggcctgga acaaaagtac ggctttaacc
     1861 gcatgacccc gaaactgttc gtgatcgaca gcatcaaggg gctgctagta ggcgcggtgc
     1921 tcgggctgcc tttgttggca ttgattctct ggctcatgaa cagtgccagc gctgcctggt
     1981 ggatctgggc gtgggcgagt tgggctgcgt ttaactttgc ggtgatgttg atcttcccga
     2041 catggattgc accgctcttt aacaaattca cccctttgca ggacgttgcc ctaaaggacc
     2101 gtatcgacgc cctggccaaa cgctgtgatt tcgcgatcca gggtttgttt gtgatggacg
     2161 gctccaagcg ttcagcccac ggcaacgcct atttcacggg tttcggcaaa tctcgccgaa
     2221 ttgtgttctt tgatacgttg ctctctaaac tctcccccac cgaaatcgaa gcggtgctgg
     2281 cccacgagct cggtcatttc aaacacaaac atatcgtcaa acgtctggcg atgtcgttgg
     2341 ttggatcatt gctgatgttt gccctactag ggtggttgag ccagcaggcg tggttcttta
     2401 ccggacttgg tgtaacgcca ttggccagtg gcaataatgg catggcatta ttgcttttct
     2461 ttctcgtgat gcccgtcttt acattcatgc tcacgccact gacgagctgg ctatcacgcc
     2521 gtgacgagtt tgaagctgat cgatttgcag cctcacagag tcaggccagt gatctggtct
     2581 cggcactggt taagttgttt aacgacaatg cagccacgct gacaccggat cctgtgcact
     2641 cggcgtttta cgacagtcat ccgcctgcga ccatccgtat tcaggcacta agcgcggcat
     2701 gaccgagcca actgtgcgcg gccgtgtgat cggcgcccac ggccgccact acagtgttga
     2761 actttcctcg ggcgagctca aacattgctt ccccaaaggc aagcgcaatg aagcggccgt
     2821 tggcgactgg gttcaagttc aattacaagg cgaaaacgag gggcatcttg cagcaattga
     2881 gcccagacaa aacctgctgt atcgctccga cgaatggcgc tccaagcagt tcgccgccaa
     2941 cgttgatcaa ttgtttgtgg tggtcgcagt caaaccgacg ttttctgatg acttgctcgg
     3001 tcgtgcgcta accggtgcct gggccgccga tattgaaccc gtcattgtgc tcaataaaac
     3061 cgacattaca gacggcctgg ctgcagcacg agacaaactc aagccctata aagatttggg
     3121 tgtgaacatt atcgaggtca gtgcactgga tgctgacacg gtcaaaaaaa cactagcacc
     3181 gctcctgacc cacaaaacca cgcttttgct tggccaaagc gccatgggta agtccacact
     3241 gttaaatgcc ctggtgccac aagccaaggc ctctacccaa gaacactcgc aagcccttga
     3301 tgctggcaaa cacaccacca caaccacaca cctctaccac ttgcccgcaa tagatggtga
     3361 tttgatcgac tcacctgggg ttcaggcgtt tggcctcgcc catttggggc tgcaagacat
     3421 tgagcatgga tttcctgagt ttgccgcgca caaagtgcat tgccgctttt ataactgcag
     3481 ccatcgacgt gaacccaact gtggcgtact cgatgcgcta gcgcgcggtg aaatagacgc
     3541 acgccgccac gcgctttatt tgcgactgct cgacgagaac gccaacgcta aaacctgata
     3601 gaggccatgc aacatggctg cggttgcgcc ccagatgaaa taaccttccc agggcactga
     3661 gtagtaatga cgagtagatc catctgacaa agttgcacaa tggaggcgat agttacccgg
     3721 ctctgtcaga aacgacagag gcacttcaaa tacctcagcc acttcaaact cgtcaggtgc
     3781 cagcgtaaat gtgggcatca ccaaaccagt aaccggtgtg acggcaaacc ccgtacccgt
     3841 gtagtagcgt ggcaaatggc ctaagacatt gacgtgctca ggtgccaatc ccgtttcttc
     3901 gtgggtttca cgcaaggccg tggcaatcgg gtcgacatcg gttgtctcaa cgcgtccacc
     3961 ggggaaactg acttggccgg catggtcgta caaatgatcg gttcgttgag tcaacaacac
     4021 ggtgatgccg ttttgacgca tcaccaaagg tacgagtacg gcggcctcaa tggcctgcgt
     4081 attgacttcc atgtagcgag tggcaaatgc atcgggcaga tgcaaaggct catgaatgga
     4141 tcgagctagc acttggcgca cgaagtccac ttgcaatatg tcaccgggca cagcgccgag
     4201 atcgtttgag gcgggctgcc aaggttgagt ttgtgggttg aaagccggtc gcttgcgcga
     4261 tgagttggat gcgtgggaag cgtgggaggc acgactacgt agatcggttt ctgcgtcttt
     4321 gctcacactg acatccttac cggttgcatt gttaacctgc cttctgaaga taaccgaacg
     4381 aacaactaaa aagcgcaata actaagtcca ataaccgaac ccgatgacta agcacaataa
     4441 ctgcgcacaa caaaaaagca cctcgagagt gcttttttgt tgtgtcggtt tagcaaatgc
     4501 agactcaaca cttatgccgg gttacggcgc accagctttt ctttaatacg ggctgactta
     4561 ccggagcgtt gacgcaagta gtacaacttg gcacgacgca catcgccgcg acgcttgacc
     4621 tcgatcgagg caatctgcgg tgagtacaac tggaacgtac gctcaaccgc ttcacccgaa
     4681 gagatcttgc gaacgataaa agaagagttc agaccacggt tgcgcttggc aatcacgaca
     4741 ccttcataag cctgtacacg ctttcggttg ccttcaacca cattcacgtt tacaacaagg
     4801 gtgtcaccgg gtgcaaattc aggcaaaggt ttgccatcgg tcaggcgagc aatttcttct
     4861 tgctcaattt gggcaatcaa gttcatcagt aaactccatc ggtatcgtgc tctcggctca
     4921 cattgttgtt tggtgacgcc tcaacctatt tgagacgccc ttgccgggca gaggatacgt
     4981 aagcccatta gtatagcgca gttcacttgg gcgaacagcg ctgttggtcc gcctatcttg
     5041 ggtttggttt agaaccccac catagcgcca aaccacatca ggccaggcac aagggcagcc
     5101 caaaaggcga ccaacgcaat gtcacctttg agcgtaggac cctt
//
LOCUS       DATBNL010000439         3925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_25055, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000439 DATBNL010000000
VERSION     DATBNL010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25055"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..987
                     /locus_tag="VIC30_07675"
     CDS             355..987
                     /locus_tag="VIC30_07675"
                     /inference="COORDINATES: protein motif:HMM:NF039803.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6516 family protein"
                     /protein_id="HEY7804294.1"
                     /translation="MAEHIFYDKALLPEGFILEMVIWKLPAPSAERPHGLKYRLFYGR
                     DGIRLVGYDNERGKGDHKHVGNREIPYRFMTVEQLVADFLADLGKLIVQKTNKVKVHV
                     GSMSDIGKRFTNAWNKGAVDKKVDETHITFLDFQTMLDTLSLRRLELLKHVHQYGADN
                     VKQLATALNRNYKNVHHDVAVLESAGLLLRDGRKLLAPWDELSASVSLSV"
     gene            1089..1286
                     /gene="rhuM"
                     /locus_tag="VIC30_07680"
     CDS             1089..1286
                     /gene="rhuM"
                     /locus_tag="VIC30_07680"
                     /inference="COORDINATES: protein motif:HMM:NF024706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RhuM family protein"
                     /protein_id="HEY7804295.1"
                     /translation="MCAVWLLPVFAVTDKTTAELIAERADSKRLNVGLITWKSGSVQK
                     TDVTVVKNIGMSLRLANLIAS"
     gene            2076..2462
                     /gene="rutC"
                     /locus_tag="VIC30_07685"
     CDS             2076..2462
                     /gene="rutC"
                     /locus_tag="VIC30_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006299181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein C"
                     /protein_id="HEY7804296.1"
                     /translation="MTHTPIVPTGSAPPLAPYAPGVRAGNNIYVSGMLPIDKDGNSVG
                     LGDITAQTRHVLESIKAVVEAGGASMADIAYNAIILKDLADYAAMNKVYAEYFPSNPP
                     ARYCIRADLVKPEFLVEITAIAYVGS"
     gene            2471..3265
                     /locus_tag="VIC30_07690"
     CDS             2471..3265
                     /locus_tag="VIC30_07690"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7804297.1"
                     /translation="MATVHCDGANIYWESAGQGTPLMMVAGLGGVAAYWTPQMKTFCR
                     DYRVIAHDQRGTGRSSQVPVQSVEQMADDALAVMDAAGVDRTLSLGHSTGGAIGVALA
                     LKYPDRIAGLVINASTTHGDAYRHKLLGLRKTLLKMERPDAYASYTTLLLYPHWYINE
                     HHAQLMVDEVKAVQSLGNAQAQESRLDAILRFDPRESLGQLNVPTLVLCAKDDILTPP
                     YFSEEYAALIPNAKLVTLETGGHAASRTVTAEYDLVVRAFFESLPQ"
BASE COUNT          972 a          959 c         1045 g          949 t
ORIGIN      
        1 gtattttgac cactttacgg gtggataaaa gtaggattaa atcgttgaaa atcaataatt
       61 taggtgttta ttcggcaatc cgttcatagg tcttttaatc cgttggtcgt gggttcgagt
      121 cccacccgac ccaccagaaa acgaatccca gtcagcgaga gttggctggg atttttattg
      181 cgcgtctgtt tcgtaactgt gatgtcgctc tgctcaatcg aagtgtattg gggcaatctg
      241 taatgatctg caaggagaac tgcttcaaag ctgccaatta aatacaccgt tggctaaaaa
      301 gtagaaatat ggttttcgac accatttata atttatggca cgatacacca tattatggct
      361 gagcatattt tttacgacaa agcgctcttg cccgaaggat tcattcttga aatggtgatt
      421 tggaagcttc cggcgccaag tgcagaaaga ccgcacggct tgaagtatcg gttgttttat
      481 ggacgcgacg gtattcgcct cgttggttac gacaatgaac gaggcaaggg agaccacaag
      541 cacgttggga acagagaaat cccatacagg ttcatgacgg tagagcaatt ggttgcggac
      601 tttctggcag atttgggaaa gctaatcgtg caaaaaacaa ataaagtgaa agtgcatgta
      661 ggtagcatgt ctgatatagg caagcgtttc acaaacgcct ggaataaggg tgcggtcgac
      721 aagaaagttg atgaaaccca cattaccttt ctggattttc agacaatgct cgatacgctg
      781 tcgctacgcc gtctggaatt gctcaagcac gtgcatcagt atggtgctga caatgtgaag
      841 caactcgcca ccgcactgaa ccgtaactac aaaaatgttc atcatgatgt cgcagtgtta
      901 gagtctgcag ggctgctgtt gcgcgatggt cgaaagctct tggcaccgtg ggatgagtta
      961 agtgccagtg tgtctttgtc ggtgtagtgg cggcagtccg gattgtgtca cgctacgagc
     1021 ctcgatgagt tagcccggga tttttgcgct aaagttcaga ggccgaacca tgaacacagt
     1081 cgttcttgat gtgcgcggtt tggctgttgc ctgtttttgc cgttaccgac aagaccaccg
     1141 ccgagctgat tgccgaacgc gcagacagta aacgcctgaa cgtgggtctg atcacctgga
     1201 agtctggcag tgtgcaaaag accgacgtga cagtagtcaa aaatatcggc atgagtctga
     1261 ggttggcaaa cttaatcgca tcgtgacgat gtggctggac tccgcgaaag accaggcgcg
     1321 ccgacgggaa gaactgtttc tcaaggaccg ggctgaaaag ttgaatgcct tttgaagttt
     1381 aacgaccgag acgtgttgga tggcgctggc caagtctcca agaaacaagc cgacatccat
     1441 gccgagtacg agtagtttgc ctcgaaacgg caagcatttc ttgaggtcga aggcactgaa
     1501 ttcaatgtcc gagccttgga agatgctgcc aaagcgctac ccaagccaaa gaggaaaaag
     1561 attctcagca aatcagcccc cagcaatctg ctggagggct caacggtttg gcaggccctt
     1621 cgacacatcg tcaaccttgc gccaataatc ctgaagagca ccggtaattt tcgacgcggg
     1681 ctcattttct tagcgggttt tatctatcgt ctacgtgtca ctcaccgagc cacttgagtc
     1741 gggggcggcg ataaccttgg cgccccatgt tgtgttttta atggcgaatg gcgcgatatt
     1801 gccagcgcca gagatacccg catgcctgca gtcaaatcaa cgggactgtg tgttgagcat
     1861 ttcccgagcg acgcaagctg tgcgatgttc ggtggcttca ggcatcgcta gggttccatg
     1921 aaataaattt ttgctgttca gctcgagatg ggcacttgcg ccggcgcgtt atagtaactt
     1981 ggtagcagcg ccatgccgac cgagcagtgc cttggttgtg cacttacggg cttagagact
     2041 cgtgtgacga tttaaacgta gaggagggcc tccttatgac acacacccca attgttccaa
     2101 caggctcagc gccaccattg gcaccttacg cacccggcgt gcgagctggc aataacatct
     2161 acgtgtctgg gatgcttccg atcgacaaag acggcaactc ggttggcttg ggcgacatta
     2221 cggcccagac acgtcatgtg cttgaaagca tcaaggctgt cgttgaggcg ggcggcgcat
     2281 caatggctga tattgcgtac aacgccatca tcctcaaaga cttggcggat tatgctgcca
     2341 tgaacaaggt ctatgccgag tacttcccgt ctaacccacc agcgcgctat tgcattcgcg
     2401 ccgatctcgt taaaccagag ttcttggttg aaatcacggc aatcgcttac gtaggaagct
     2461 aaaccgcatc atggcaactg ttcattgcga tggggccaat atttattggg agtcggcggg
     2521 tcaaggcacc ccactgatga tggtggcagg cctaggcggt gtggcagcct attggacgcc
     2581 gcaaatgaag accttctgtc gtgactatcg cgtgattgct cacgaccaaa gaggcactgg
     2641 ccgatcgagt caggtgccag ttcagtctgt cgaacaaatg gccgatgatg cgcttgctgt
     2701 catggacgct gcaggcgttg accgaacgct ttcccttggg cactctacag gcggtgcgat
     2761 tggtgtagcc ttggcgctca aatatccgga tcgcattgct gggctggtca ttaatgccag
     2821 caccacgcat ggcgatgcct accgacacaa gttgctgggc ttgcgcaaaa cacttttgaa
     2881 gatggaacgt cccgatgcct acgccagtta caccacgctg ttgttgtacc cgcattggta
     2941 tatcaacgag catcatgccc aactgatggt cgatgaggtt aaagctgtcc aatcactggg
     3001 caatgcgcag gcgcaagaga gtagacttga tgccatcttg cgttttgacc caagagaaag
     3061 ccttggccaa ctcaatgtgc ccacacttgt gctttgcgca aaagatgaca ttctgacgcc
     3121 accatatttt tctgaggaat acgcggccct cataccaaat gccaaactcg tcacactcga
     3181 aacgggtggc cacgcggctt ctcgtacagt gactgctgaa tacgacttag tggtgagggc
     3241 gttttttgag tcgctgcccc agtgaccaac taaacaaaac gcaacttcca cacaaccttc
     3301 acagaaccgc cacgcaacct tcacatatcc accgcacaac catacctacg tttgtcatgg
     3361 cggcatggtc atctccagtg gtgccacgcg tcatgccatg acccaggcaa atgaagcaag
     3421 ggtgacgctg gcgtaaaaca ccatggatca ttgcgagcct tccatacgtt tctcagcgca
     3481 gttggttatg ccaatggttc gaaaccaata attcttgatc gaggtggcac aacacatgag
     3541 ttgccactag gcgtggcgac ggcctaatcc aaatcccatt gacgtaatgc tctcttcaca
     3601 acgtgtctgt ttgatcgaca tttcaatgtg aaacggacgg gtttctacgc gagacggacg
     3661 aatatggccc taaagatgca agagtgtgca gtcgctgggg taccttcaat cgcgtgcgct
     3721 gtgattgttt ttttatcagc cttaaaactg aattggtttt aggttgctgg catcgaggtc
     3781 tgagcacgtc gatgccatta ggaggtggct gagtcagtca cccgtgtgtc aataaaaacg
     3841 gtcagccaga cagacgattt gaatggagtg tttatgagtg tgtctcgagt gaaacaacgc
     3901 cgttggcaac taacgggact ggcca
//
LOCUS       DATBNL010000440         3386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_15467, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000440 DATBNL010000000
VERSION     DATBNL010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15467"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..2066
                     /gene="recG"
                     /locus_tag="VIC30_07695"
     CDS             69..2066
                     /gene="recG"
                     /locus_tag="VIC30_07695"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEY7804298.1"
                     /translation="MFGKLGLNTPQDFLLHFPIRYEDETCLSPIAQASAGQSIQFEAV
                     VQSCELTYRPRRYLTARMRDGSGEIQLRWINFYPSQVQQMQAGKRWRVRGEVRAGFGG
                     LEMVHPKVTSPSSPLPQSLTPVYPTTEGLPQKAIAQRIEQALNTLDLDDSLPETVRDS
                     LGLMPFRQAVDVLHRPAPGEDLDALVDRTHPAWVRVKFDELLAQQLSLANAREQRRLR
                     QADPLFEPLDRVSYVQKLSTELPFQLTAAQQRVVQEIHADLAQTWPMHRLLQGDVGSG
                     KTVVAALAAMRAIDHGKQAAVMAPTEILAEQHYLKLEPWATALGLQCVWLSAGLPARI
                     KRQALEAIASGQAQLVVGTQALIQQGVTFADLGLAIVDEQHRFGVSQRLALGEKANGR
                     LPHQLTMSATPIPRSLAMTCFADLDVSVIDERPPGRLPVKTKLVSASRRAEVIDGLRE
                     SVASGGQVYWVCPLVEESEALQLQTATDTYEMLTAALEGLTVGLVHGKLHAKEKADVM
                     QRFKAGEIDVLVATTVIEVGVDVPNASQMVIEHAERFGLAQLHQLRGRVGRGTRESIC
                     LLLYEPPLSFDAKYRLKALYETDDGFEIARRDLQLRGPGEFLGARQSGLSLLRFADFE
                     ADAHWVEKAKALCEDLRAQQPEVAKCHMDRWMQSREAFLNG"
     gene            2090..3046
                     /locus_tag="VIC30_07700"
     CDS             2090..3046
                     /locus_tag="VIC30_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-inducible genes activator"
                     /protein_id="HEY7804299.1"
                     /translation="MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIRKLEDELG
                     IVIFERGGSEIGVTPVGERVITQAHKVLQESAAIKQIARVGHDPLAGPLRVGVIYTIG
                     PYLLPRLIPKQIERTPQMPLILQENFTTRLVELLRQGEIDCAIMALPLPDTGLNTVPL
                     YDEPFMVAMPAKHAWASRKEIDAEDLKQENMLLLGSGHCFRDHVLGVCPELSRYSDAP
                     EGMQRTFEGSSLETIRHMVAAGIGLTVMPVTSLMQHDQPGSQLLKYVPFKAPAPERRV
                     VLAWRKSFPRMAAIRAFIDTIQAIDLPGVQMLDVADRALPED"
     gene            3111..>3386
                     /locus_tag="VIC30_07705"
     CDS             3111..>3386
                     /locus_tag="VIC30_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY7804300.1"
                     /translation="MARKSATSTKAQTTKAPAINIGISAKDRATVAGELSKMLADSYT
                     LYLMTHNFHWNVEGPMFNTLHNMFMTQYTEEWTALDQIAERIRALGHF"
BASE COUNT          755 a          862 c          998 g          771 t
ORIGIN      
        1 cagccacaag ccgcaggacc gggcaggcca agtcagccaa accagccaag aggcgcgatc
       61 ttgcgagctt gtttggcaaa cttgggctaa atacgccgca ggatttcttg ttgcattttc
      121 ccatccgtta cgaggatgaa acgtgcctat cccctattgc ccaagccagt gcaggacagt
      181 ccatacagtt tgaggctgtg gtgcagtcgt gtgagctcac gtatcggcca cgacgctact
      241 tgactgcgcg catgcgtgat ggttctgggg agatccagct tcgctggatt aatttttacc
      301 caagccaagt acagcagatg caagctggca agcgttggcg cgtgcgtggc gaggtgcgtg
      361 cgggctttgg cggcctggaa atggtgcatc ccaaggtcac cagtccctct tcgccgttgc
      421 cacagtcgtt aacacccgtc tatcccacca ccgagggttt gccacaaaaa gccattgcgc
      481 agcgtatcga gcaagccttg aacacgctgg atctcgacga ctccctgccc gagactgtgc
      541 gcgacagtct ggggctcatg ccgtttcgcc aggccgtcga tgtgttgcat cgtcctgcgc
      601 ctggcgaaga tctcgatgca ctggtggacc gcacgcaccc agcatgggtg agggtgaagt
      661 ttgatgagct gttggctcag cagctaagtt tggccaatgc gcgtgagcaa agacgtctac
      721 gccaggctga tcccctgttt gagccgttag atcgtgtcag ttacgtgcag aaactgtcaa
      781 ctgaactgcc atttcaatta acggccgcac aacagcgtgt ggtgcaagag attcacgcgg
      841 atttggcgca gacgtggccc atgcatcgac tgctgcaagg cgatgtagga agtggaaaga
      901 cggtggtggc ggcactggct gcgatgcgcg ccattgatca cggcaaacag gccgcggtca
      961 tggcaccgac tgagattctg gccgagcagc attacctcaa acttgagccc tgggccacgg
     1021 ctttggggct gcagtgcgta tggttaagcg ccggactgcc tgcgcgcatt aagcgccaag
     1081 cgctagaagc catcgccagt ggtcaggcgc agttggtggt cggtacccag gctttgatac
     1141 aacagggtgt gacatttgcc gatctcggtt tagcgatcgt ggatgaacaa catcgcttcg
     1201 gggtttccca acgtctggcg ctcggagaaa aagccaatgg ccgtttgcct caccagctaa
     1261 ccatgagtgc cacaccgatt ccgcgatcgt tggcgatgac gtgttttgcg gatctggatg
     1321 tatcggtcat tgatgagcga ccaccgggac gattgccagt caagactaaa ctcgttagcg
     1381 caagccgccg agctgaggtc atcgacgggt tgcgtgaatc ggtggcaagc ggcggtcaag
     1441 tctactgggt gtgtccattg gtcgaggaaa gtgaagcctt gcaattgcaa acggccactg
     1501 atacctacga aatgctcacg gccgcactcg aggggcttac tgtcgggttg gtccacggca
     1561 agctgcatgc caaggaaaaa gccgatgtga tgcagcgctt taaagccggt gaaatcgatg
     1621 tgctggtagc cacaactgtc attgaggtgg gtgtcgatgt acctaatgcc agtcagatgg
     1681 tcattgagca cgctgagcgg tttggcctgg cacagttgca ccaattgcgc ggccgggtag
     1741 ggcgcggcac ccgcgagtcg atttgtttgt tgctgtatga gccaccgctg tcgtttgacg
     1801 ccaaatatcg gcttaaagcg ctttatgaaa ccgatgacgg atttgagatt gcacgtcgcg
     1861 atttgcagtt gcgcgggcca ggtgaatttt taggggcacg tcagtctgga ctttcattgc
     1921 tgcgatttgc ggactttgag gctgatgcgc actgggtaga aaaggccaag gcgttgtgcg
     1981 aggacttacg tgcgcaacaa ccagaggttg cgaaatgtca catggaccgc tggatgcaat
     2041 cacgtgaagc gttcttaaac gggtaggatg gtggtctaag gagtgattca tgaccttgac
     2101 tgaactgaaa tacattgtgg ctgtggcgcg tgagcgtcac ttcgggcgcg cagctgaggc
     2161 ttgttttgtg agtcaaccga cgctgtcagt ggcgattcgt aagctagaag atgagttagg
     2221 aatcgtgatt tttgagcgcg gtggctccga aattggtgtc acgcccgtag gcgaacgcgt
     2281 tatcacgcaa gcacacaaag tgctgcagga aagtgcggca atcaaacaga tcgcgcgcgt
     2341 cggtcatgac ccgctagctg ggcctttgcg tgtgggcgtg atctatacga tcgggcctta
     2401 tttgttgccc cgactgatac ccaagcagat cgaacgcaca ccgcaaatgc cattgatctt
     2461 gcaagaaaac ttcaccacac gcctggtaga gctgttgcgt caaggcgaga tcgattgcgc
     2521 catcatggcg ctgccgttgc cagacacggg actcaataca gtgcctctct atgatgagcc
     2581 tttcatggtt gcgatgcctg ccaagcacgc ttgggcgagc cgaaaagaga tcgatgctga
     2641 agatctaaaa caagagaaca tgctgttact tggctcgggc cattgctttc gtgatcatgt
     2701 tttgggggtt tgtccggaac tgtctcgcta ctcagatgcg ccagagggta tgcagcgcac
     2761 gtttgaaggg tcgtcgcttg agaccatccg gcacatggtt gccgctggca ttggtttgac
     2821 cgtcatgcca gtgacttcct tgatgcagca cgatcaaccg ggctcgcaat tgctgaagta
     2881 cgtgcctttc aaagcaccag cacccgagcg tcgcgtggtt ttagcgtggc gcaagagttt
     2941 cccgcgtatg gcagcaattc gggcgttcat tgacaccatt caagccattg atttacctgg
     3001 tgttcaaatg ctcgacgtgg ctgaccgcgc actgcccgag gattagacgc gctgtatgcg
     3061 tggtggtact ctgaagaggt attttgtttt tacatgccaa aggaatgatc atggccagaa
     3121 aatcagcaac aagcactaaa gcacaaacaa cgaaagcgcc cgcaattaac attggcattt
     3181 ctgccaaaga cagggcaacg gttgccggtg agctctccaa aatgctggca gactcttaca
     3241 cgctgtatct aatgacacat aactttcact ggaatgtgga aggcccgatg ttcaacactt
     3301 tacacaacat gttcatgacg cagtacaccg aagagtggac cgcacttgat cagattgctg
     3361 aacggattcg tgccttgggt cacttt
//
LOCUS       DATBNL010000441         3248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_65144, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000441 DATBNL010000000
VERSION     DATBNL010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65144"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..675
                     /gene="tatB"
                     /locus_tag="VIC30_07710"
     CDS             187..675
                     /gene="tatB"
                     /locus_tag="VIC30_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013390941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HEY7804301.1"
                     /translation="MFDISFTELMLVGLVALVVIGPERLPKVAKTVGHLLGRAQRYVN
                     DVKGDIQREVELDELRKMKDDMESAARSMQSSMQQTESKLRKEFQSPVDDFKGELDEL
                     KGDFEDQVKTEKPAATAPQTSAESKAEPHAEHQPQPTTEVGIQMPSSDKTVSNNVPEH
                     KS"
     gene            672..1475
                     /gene="tatC"
                     /locus_tag="VIC30_07715"
     CDS             672..1475
                     /gene="tatC"
                     /locus_tag="VIC30_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY7804302.1"
                     /translation="MSQADTAPQEGFLSHLVELRNRLVKAVIAVMAVFVVIFMYPGAS
                     AIYDFLAQPMLASLPQGTRMIATGVITPFMVPVKVTLLAAFLVALPYVLYQAWAFVAP
                     GLYRHEQHLALPLIVSSSLLFLAGMAFCYYVVFQTVFAFITSFAPQSITPAPDIEAYL
                     SFVMTMFIAFGITFEVPIVVVLLVRMGIMSVQKLREIRGYVIVVAFVIAAVVTPPDVI
                     SQFMLAVPLWILYEVGLLLASRIKPRPRDDEDDGGDASDETSTSSGKKD"
     gene            complement(1472..2434)
                     /locus_tag="VIC30_07720"
     CDS             complement(1472..2434)
                     /locus_tag="VIC30_07720"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7804303.1"
                     /translation="MDIRQIQYFICLYEEKSVTKAAKRLNIVQPALSMQITRLEGEIG
                     RELFTRTPRGMYATPAGDEMYSLFLPVVSSFTAAKSKITHQTKSLSGHVRVGLMASIG
                     HSVLPDVLNKFTQEHQQVTLSITEGLTDPLCESVANGRLDLAFVNQPRKDCKLNQERV
                     LREEIFVISSARSGQRLAAKQHLQDVAQHQLILPTREHGLRLLLDDYASKLGVTLVPA
                     FELDSILALALLVDKGSYLAFLPGSVIKSLKDRAAIHLRTHRLVAPSLQRQIVYVHNP
                     QRVPTAAAQAFARLLVASLRQSQDTALGSVVELRRLPLNALDVA"
     gene            2617..2934
                     /locus_tag="VIC30_07725"
     CDS             2617..2934
                     /locus_tag="VIC30_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011493590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7804304.1"
                     /translation="MISERLKTARLRAGLSQEKLGKLAGIDPTSASARMNQYERGKHS
                     PDYRLMCRVAEILKMPVSWFYTEDDDMARLEEIFFNMTPDTKSELLTHAEALNQKATS
                     VVA"
     gene            2976..>3248
                     /locus_tag="VIC30_07730"
     CDS             2976..>3248
                     /locus_tag="VIC30_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEY7804305.1"
                     /translation="MQRSELEQWFEQTLEPKRFTDYCPNGLQVEGRSEIHRLVTGVTA
                     SLALIDKAIEVNADGVLVHHGWFWRGEDLTVRGIRKQRLAKTLAHDL"
BASE COUNT          795 a          784 c          869 g          800 t
ORIGIN      
        1 ggctggagat aagcctgaag atggcgaatc ggccgggcaa acgcaacgtg tggcgtctgg
       61 tgaaaccatc gatgtgcaag ccaaggagaa gtccggctcg cagtcttctt aaggctgcgg
      121 tcgtgggatc tgggttgtcg atgacgacgg ccagcatgtt cttgacttca taaaaatagg
      181 caccacgtgt ttgatatcag ctttactgag ttgatgctcg ttggtttggt ggcgcttgtc
      241 gtcatcggac ccgagcgcct gcccaaagtc gcaaagacag tcgggcacct gctgggtcgc
      301 gcgcaaaggt acgtcaatga cgtcaagggc gatattcagc gtgaggttga gctcgacgag
      361 ttgcgcaaga tgaaagacga catggagtcc gccgcccgat ccatgcaatc atcaatgcaa
      421 caaaccgaat ccaaactgcg caaagagttt caaagcccgg tcgatgattt caaaggcgag
      481 ctagacgagc tcaagggtga ttttgaagat caggtgaaga cggaaaagcc ggcagcgact
      541 gcgccacaaa ctagcgccga gtccaaagcc gagccacacg ccgagcacca accgcaacct
      601 accaccgaag ttggcataca aatgccctct tctgacaaga ctgtcagcaa caacgtgccg
      661 gagcataagt cgtgagtcaa gctgatacag ccccacaaga ggggttcttg tcgcacctcg
      721 ttgagctgcg taaccgtttg gttaaagccg tcattgcagt tatggcggtg tttgtggtga
      781 tctttatgta tcccggcgct tcggccattt atgattttct cgcgcagccg atgctggcgt
      841 cactgcccca aggcacccgc atgatcgcca ctggcgtgat cacacctttc atggttccgg
      901 tgaaggtcac gcttctagcc gcatttttag tggcacttcc ctatgtgctt tatcaggcat
      961 gggcgtttgt cgcaccaggc ctgtaccgcc atgagcaaca cctcgccctg ccattgattg
     1021 tctctagctc gttgttgttt ttggcgggta tggcgttttg ttactacgtg gtctttcaaa
     1081 cggtgtttgc attcatcacg tcgtttgcgc cacagtcaat tacccccgca ccagatatcg
     1141 aagcttattt aagctttgtg atgaccatgt tcattgcgtt tggtatcaca tttgaagtac
     1201 caatcgttgt ggtgctgctc gtgcgtatgg gcatcatgag cgtacaaaag ttgcgtgaga
     1261 ttcggggcta tgtcattgtc gtggcatttg tcattgcggc cgttgtcacg ccaccggatg
     1321 tcatcagcca gtttatgttg gcggtgcctc tgtggatttt gtatgaggtt ggtctactgc
     1381 tcgctagccg cattaagccg cgtcctagag acgatgagga tgatgggggc gatgcttcgg
     1441 acgagacgag tacatcgagc ggtaaaaagg actaagccac gtccagcgca ttgagcggta
     1501 agcggcgcag ctcgacaacc gaaccaagtg cggtatcctg tgattggcgc aacgaagcga
     1561 ccaatagtcg agcaaatgct tgtgccgcag ccgtaggcac gcgttgtggg ttgtgcacat
     1621 aaacaatttg acgctgtaga gatggtgcta ccaatcggtg cgtgcgcaaa tgaatcgcgg
     1681 cacgatcctt gagactttta atcacactgc caggcagaaa ggcaagataa gaccctttgt
     1741 ccactagtaa agccaaggcc agaatcgagt caagctcaaa agccggcact aacgtcacgc
     1801 cgagcttact cgcatagtca tcgagtaaca atcgtaagcc atgttctcgg gttggtaaaa
     1861 tgagttggtg ttgcgcgacg tcttgcaaat gttgtttggc agcgagccgt tgaccactgc
     1921 gcgctgatga aatcacaaat atttcttcac gcagcactct ctcttgattc agtttgcaat
     1981 ctttacgtgg ttgattcaca aaggctagat ctaaccgacc gttggccaca ctctcacaca
     2041 acggatcggt cagaccttct gtaatagaca aagtgacttg ctggtgttct tgcgtaaatt
     2101 tattcaaaac atcgggcagg acgctatggc caatgctggc catcaaacca acgcggacat
     2161 gacctgacaa gctttttgtt tgatgggtga ttttggattt tgctgcagta aagcttgaga
     2221 ccaccggtaa aaacaagctg tacatctcgt cacccgcagg cgtcgcgtac atgccacgcg
     2281 gcgtgcgtgt aaagagttca cgcccaatct cgccttcgag cctagtgatc tgcatgctca
     2341 acgcgggttg cacgatattg agccttttag ccgccttggt gactgacttt tcctcataaa
     2401 gacagatgaa atactggatt tgtcggatgt ccactgttac tgttgtcctg aatcattaag
     2461 gaaaaacaca tatcaattat tttgataccc ctaattagaa ataattagta gacagaatgg
     2521 tattggaatt tttagtattt gtgtacaaaa atgagatagc aggcttgcct gctagtagcg
     2581 tcgtcaatga cgaaacaaaa gtcccacggg ggaagtatga ttagcgaacg ccttaaaacc
     2641 gcacgtctgc gcgcaggttt gtcacaagaa aagcttggca agctagccgg cattgacccg
     2701 acatcagcga gtgcccgcat gaaccaatat gaacgtggca agcactcacc tgactatcgc
     2761 ttaatgtgcc gcgtggcgga aattcttaaa atgcctgtca gttggtttta cactgaggat
     2821 gatgatatgg ctcggttgga ggaaatattc ttcaacatga cgccagatac gaaatctgaa
     2881 ctgttgacgc atgctgaggc attgaaccaa aaggcaacga gcgtggttgc ctgatcaagc
     2941 ccttcgcctt ggctgaactt attaactgag gcaatatgca gcgaagcgaa cttgagcagt
     3001 ggtttgaaca gaccttagag cctaagcgat ttacagatta ctgtcccaat ggcctgcagg
     3061 tcgagggcag atctgagatc caccgcttgg tgacgggtgt tactgccagc cttgcgctga
     3121 tcgacaaagc cattgaggtt aatgccgatg gcgtgttggt gcatcacggc tggttctggc
     3181 gcggcgagga tctgacggtg cgtggtattc gcaagcaaag attggctaaa acattggctc
     3241 acgatctg
//
LOCUS       DATBNL010000442         1663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_104976, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000442 DATBNL010000000
VERSION     DATBNL010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104976"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VIC30_07735"
     CDS             <1..615
                     /locus_tag="VIC30_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY7804306.1"
                     /translation="ANTIILVASILAIQLFLCTLAAYAFARYEFVGSNVLFSLVLVQL
                     MVMPEILLVRNYQTLTSLGLVDTLFGIGLPYFASAFAIFLLRQTFKTVPKELVEAAQM
                     EGANTLQILRHVYIPLAKPTYLAFSLVSVSHHWNNFLWPLVVSNSVESRPLTVGLQVF
                     SSADQGIDWSIITAATLLTSAPLLVGFLLFQRQFVQSFMRAGIK"
     gene            626..1507
                     /locus_tag="VIC30_07740"
     CDS             626..1507
                     /locus_tag="VIC30_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005799676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEY7804307.1"
                     /translation="MKLETWNTQWCKGLDEIVSAQRIVDGARAMGDFDVLCLQEIAQN
                     YPSLTGDTAIDQPAEIARLLPGFEVVFGAAIDEQPLGQPQGQPSRQRFGNLIASRLPI
                     LQIQHLYLPSPTPSPIRQGPAHAWMPRQCTVCTVQADWGPVRIMTTHLEYHSELQRLA
                     QAQALRHWHQMFCEQQKAGALVDPNESGTPYQAKPYTADAILCGDCNFEPHSDPYEAL
                     TSPKQHHPFHDAWTLLRAGEPHPPTFRLYDDTYGPDAVSCDFCFVSETLAPRLKHIAV
                     DTTTQVSDHQPVMIELS"
BASE COUNT          392 a          452 c          409 g          410 t
ORIGIN      
        1 gcgaacacga tcatcctagt ggctagcatt ctggccatac aactgttttt atgcaccttg
       61 gcagcttacg ccttcgcacg ttatgagttt gttggcagca atgttttgtt ttcattggtg
      121 ctcgtgcaat tgatggtcat gccagaaatc ctgttggtaa gaaactatca aacactgact
      181 tcccttgggt tggtcgacac cttgtttggc atcggtttgc cctactttgc ctctgcattc
      241 gcgatttttt tactacgcca aacctttaag accgtcccaa aagagcttgt tgaagccgcg
      301 caaatggaag gcgccaacac gctgcagatt ctgcgacatg tctacattcc actggcgaaa
      361 cccacctatt tggctttctc tttggtgtca gtaagccacc actggaataa ctttctctgg
      421 ccactggtgg tcagtaactc ggtggagtca cggccgttaa cggtcggtct gcaggtattc
      481 tcttctgctg atcaaggcat tgactggtcc atcattactg ctgctaccct attgacctcg
      541 gcgcctttgc tggtaggatt tttattattc cagcggcaat tcgtgcagtc tttcatgcgc
      601 gctggcatca agtgaggaac acaagatgaa gctcgagacg tggaataccc agtggtgcaa
      661 aggactcgat gagatcgtca gtgcccaacg gattgtcgat ggtgctcgcg ccatgggtga
      721 cttcgatgtg ctgtgcttgc aagagatcgc tcagaactat ccaagtctca cgggtgatac
      781 cgcaatcgat cagcccgcgg aaatagcgcg cctgttaccc ggatttgagg tggtgtttgg
      841 tgcagcgatt gatgaacaac ctttgggaca acctcaggga caaccttcgc gacagcgctt
      901 tgggaatctg attgcctcac gattacccat actgcagatc cagcacctgt atttgccttc
      961 acccacaccc tcacccatta gacaaggccc cgctcacgcc tggatgcccc gtcaatgcac
     1021 ggtgtgcacg gttcaagctg actggggtcc ggtcagaatc atgaccaccc acttggagta
     1081 ccacagcgaa ctgcagcgac tggcccaagc gcaggcactg agacactggc accaaatgtt
     1141 ctgtgaacaa caaaaagctg gtgcacttgt ggatccaaat gaatccggca cgccctatca
     1201 agccaaaccc tacaccgcag atgcgattct ttgcggtgac tgcaatttcg agccgcacag
     1261 cgatccatat gaagcgctga catcgcccaa gcagcaccat ccgtttcatg atgcctggac
     1321 gctgctacgc gcgggcgagc cccacccacc aacctttagg ctgtacgacg acacctatgg
     1381 tccagatgcg gtgagctgcg atttttgttt tgtgagtgaa actttggcac ctaggctcaa
     1441 acacatcgca gttgacacga ccacgcaagt gtctgatcat caaccggtga tgattgagct
     1501 tagctgacac gagctgctag tgaacgagcc ggataaaata accatgagtc aaacaataga
     1561 ccgacttggc caagcacagc gtggcgattt tgcttttttt gaaacgatga cgctgcgcta
     1621 tgcggacaac gatgccaatg gtcatgtaaa caatgctcac tac
//
LOCUS       DATBNL010000443         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124908, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000443 DATBNL010000000
VERSION     DATBNL010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124908"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1058)
                     /locus_tag="VIC30_07745"
     CDS             complement(<1..1058)
                     /locus_tag="VIC30_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009239621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804308.1"
                     /translation="MINQVKRCDQLSRLVLHGYKSIANCDLTLGRTNILIGANGAGKS
                     NVIGFFRLINRLLARQLQMVVGVAGGPDALLHFGRKKTPQLNAELYFGGSGYRLTLGP
                     TEDNRMMFHKEVLWSDGQADLDLSSGHFESHTESQKSETEIYQRIIAAMRTWHSYHFH
                     DTSATALVKQIHNINDNEYLREDASNLAAFLLRLKNHHQEHYQRIVKTVRLVAPFFGG
                     FHLRANVENKDKIQLEWTEQGHDEPFPASALSDGTLRFVCLATVLLQPETFMPATVLI
                     DEPELGLHPFAVTILAALIRSASEKHQLIISTQSVELVSEFTPEDLIVVDKHDGATTF
                     SRPDTETLSEWLCDYSLG"
     gene            complement(1265..>1718)
                     /locus_tag="VIC30_07750"
     CDS             complement(1265..>1718)
                     /locus_tag="VIC30_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015421993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804309.1"
                     /translation="MFILMMAQVFALAFRGLQGEELIEDMFEWLPGGLYSDIWFMLFL
                     IFVLGFFIEWIEISYIAVPLFLPVLLAQGADPVWVAIMVTVCLQSSFLTPPFGWALFY
                     LKGVAPPDVPITAIYKGVIPFILMQIVALALVVYFPGLALWLPKAIGW"
BASE COUNT          431 a          428 c          439 g          420 t
ORIGIN      
        1 tcaccgaggc tgtagtcgca aagccactca gacaatgttt ctgtgtcagg acgggaaaat
       61 gtcgtggcgc cgtcgtgctt gtcgaccacg attaagtctt ctggcgtgaa ctcactcact
      121 aattcgacgg actgtgttga gatgatcaat tgatgttttt ctgaggcgga ccgtatcaaa
      181 gccgcaagaa ttgtcacagc aaaaggatgc agacctaatt ccggttcatc aatcaaaacg
      241 gtggcaggca taaacgtttc tggctgcagt agcacggtgg ccagacagac aaatcgtaaa
      301 gtgccgtctg acagggcgct tgccgggaaa ggttcgtcat ggccttgctc ggtccactca
      361 agttgaatct tgtctttgtt ctctacattg gcacgtaaat gaaatccacc aaaaaatggt
      421 gcaaccaatc ggactgtttt gacgatacgt tggtaatgct cttggtggtg gtttttcaac
      481 ctcagcagaa aagcggccag gttgctggcg tcttcgcgca ggtactcgtt gtcattgatg
      541 ttgtggattt gcttgaccaa ggctgtggcg ctggtgtcat gaaaatgata cgagtgccag
      601 gtacgcatcg ccgcaatgat gcgttgatat atctcggttt cgctcttttg gctttcggta
      661 tgggattcga agtgacccga ggacaggtcc aagtcggcct gcccgtcact ccaaagcacc
      721 tctttgtgaa acatcattcg attgtcttcg gtcggaccta gcgtcagtcg atagccgctg
      781 cccccaaaat acaactcagc gttgagctgc ggcgtttttt tgcggccgaa gtgcaataag
      841 gcatcgggcc caccggctac gccaacaacc atttgcagct ggcgcgctag taagcggttg
      901 atcaaacgaa agaagccgat gacattcgat tttccagcac cgttggcacc gatcaggatg
      961 ttggtgcggc ctagcgtgag atcacagttt gcgatggact tgtagccatg caataccagt
     1021 cttgatagct gatcacagcg cttgacctga ttgatcatgt tcatccttta ggttcgggtg
     1081 cttgtttatg cgtactgttg cgtttttgtg cgttgggaaa atactgtatt ttattaccca
     1141 ttctcatgaa caaggttcag gctgcgcaaa ccaaaatcga tacgcattgc gattgtatgt
     1201 gccgttctga ttgtttgtgc cgttccattg gcggcggcgt cctcacggtc tgactgagga
     1261 cacatcacca accaatcgct ttaggcaacc acagcgccag accagggaaa tagacaacaa
     1321 gtgctaacgc cacaatctgc atcaggatga acggaatgac acccttgtag attgcggtga
     1381 tgggcacatc gggtggtgcg acccctttta agtaaaacag cgcccagcca aatggtggcg
     1441 tgagaaatga cgactgcaga cagaccgtca ccatgatggc gacccaaacg ggatctgcgc
     1501 cctgtgctag tagcactggc aagaacaagg gcaccgcgat gtaactgatt tcaatccact
     1561 caatgaaaaa gcccagcaca aagatcagaa agagcatgaa ccagatatcg ctgtatagcc
     1621 cgcctggcaa ccactcgaac atgtcttcaa tcagctcttc accttgtaac ccccggaaag
     1681 ccaaagcaaa gacctgtgcc atcatcaaga taaacatc
//
LOCUS       DATBNL010000444         1962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_55107, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000444 DATBNL010000000
VERSION     DATBNL010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55107"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..178)
                     /locus_tag="VIC30_07755"
     CDS             complement(<1..178)
                     /locus_tag="VIC30_07755"
                     /inference="COORDINATES: protein motif:HMM:NF020469.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1840 family protein"
                     /protein_id="HEY7804310.1"
                     /translation="MLVTFSSKVDADVLMMADHAKLVLKASGKDVSNGIPERGVFTAE
                     QLEDAIKKLEHAIAN"
     gene            289..>1962
                     /gene="argS"
                     /locus_tag="VIC30_07760"
     CDS             289..>1962
                     /gene="argS"
                     /locus_tag="VIC30_07760"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEY7804311.1"
                     /translation="MLPAQSQTLEHALLKIARDLAPDFDTNVTLERPKVASHGDIATN
                     LAMQITKLARKPPRELAQHIIEALAKDATVSPLIADMEIAGPGFINFRLSTQAVIAVL
                     DDIECQQTHYGHWPQTEEKVLVEFVSANPTGPLHVGHARQAALGDALCRLFQANGQAV
                     SREFYYNDAGNQIDNLALSVQARGRGIDPESPLYPADGYKGDYILEIAQDYVAGKTVQ
                     ASDATPVTAKADLDDIDAIRQFAVCYLRHEQDLDLQAFGLVFDRYFLESSLYTTGKVE
                     KTVQALVSSGQTYEADGALWLKTTELGTGDDKDRVMRKREGGYTYFVPDVAYHVDKWQ
                     RGFHQAVNIQGSDHHGTVARVRAGLQALDMGIPKDYPAYILHKMVKVMRGGKEVKLSK
                     RAGSYVTMRDLIDWVGRDAVRFFLIQRRADTEFVFDVDLARSQTDENPVHYVQYAHAR
                     ICSMLMQAQADTAAIGQASGLLLSAPTEHVLLKRLAQFPGLVRQSARELSPHLVAFWL
                     RDCASDFHAWYNAERVLIDDQALRLARLRLADATRQVIANGLDLLGVSAP"
BASE COUNT          468 a          490 c          519 g          485 t
ORIGIN      
        1 tattggcgat ggcgtgctca agttttttga tggcatcctc tagttgctca gcggtaaaca
       61 cgcctctttc aggaatacca ttactgacat ccttgccgga agcttttaaa accagtttgg
      121 catgatcggc catcattaag acgtcagcat caactttgct gctaaatgta actaacatac
      181 ttgctctcct acaaaaatta ccgtatggac gcctgatttg gcaatttgac acgtttcaaa
      241 gctgcgatca ggctatcatt attttttaac ttattgcatg aaatctttat gttgcctgcg
      301 caatcgcaaa ctctggaaca cgccctactc aagatcgctc gggatttagc gcctgacttt
      361 gacacaaacg tgacattgga gcgaccaaag gtggctagcc acggcgatat agcgactaac
      421 ctcgccatgc aaattaccaa attggcccgt aaaccgccgc gcgagttggc ccaacatatc
      481 atcgaagcac tcgccaagga cgccacagtc agccctttaa ttgctgatat ggaaattgca
      541 ggtccggggt ttatcaattt ccgacttagt acgcaagccg tgattgcggt actagacgat
      601 attgagtgtc agcaaacgca ctacgggcat tggccgcaaa ctgaagaaaa ggtcttagtt
      661 gagtttgtgt cagccaatcc aaccggtcct ttacacgtgg gccacgcacg ccaggctgcg
      721 cttggtgatg cgttgtgccg gttgtttcaa gccaatggtc aagcagtgtc acgcgagttt
      781 tattacaacg atgccggcaa tcaaattgat aaccttgcgc tgagtgtgca agcacgcggc
      841 aggggtattg acccggaatc accgttgtat cctgctgatg gttacaaggg tgattacata
      901 cttgagattg cacaagacta tgtggccggc aaaaccgtgc aggccagtga tgcaacacct
      961 gtcactgcga aagcggacct cgacgatatt gacgcgatcc gccaatttgc ggtttgctat
     1021 ttgcgtcacg aacaagacct cgaccttcaa gcctttgggt tagtgtttga tcggtacttt
     1081 ttagagagtt cgctctacac taccggcaaa gtcgagaaga ccgttcaagc gctagtgtcc
     1141 tcaggccaga cctatgaggc cgacggggct ttatggctta aaacaacaga gctaggcacc
     1201 ggtgacgata aagaccgagt gatgcgcaag cgcgagggtg gttataccta ctttgtcccg
     1261 gatgtggctt atcacgtgga caagtggcag cggggctttc accaagccgt caacatacaa
     1321 ggctcggatc atcatggcac ggtggcccgg gttcgtgcgg gcttgcaagc gttggatatg
     1381 ggtataccca aagactaccc cgcttatatc ctgcataaga tggtcaaagt gatgcgcggc
     1441 ggtaaagaag tcaaactgtc caaacgagcc ggcagctacg tcacgatgag ggacttgatc
     1501 gattgggtgg gtcgtgatgc ggttcggttc ttcttaatac aacgacgcgc tgatacggag
     1561 tttgtgtttg acgtcgacct tgcccgctca caaaccgatg agaacccggt tcactacgtc
     1621 caatatgcgc atgctcggat ttgttcgatg ctgatgcagg cgcaagctga cacggctgcc
     1681 attggtcaag ccagtggttt attactgagc gcaccgaccg aacacgtatt actaaaaagg
     1741 ctggcgcaat tccctggctt ggttcgccaa tcagcgcgag agttgtcgcc gcatttggtt
     1801 gcattctggt tgcgcgattg tgcgtctgat ttccatgcgt ggtacaacgc cgagagagtg
     1861 ctaatcgatg atcaagcgct tcggctagcg cgcttgcgcc ttgcggatgc cacccggcaa
     1921 gtgattgcca acgggttgga tcttttgggt gtgagcgccc cg
//
LOCUS       DATBNL010000445         2276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174386, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000445 DATBNL010000000
VERSION     DATBNL010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174386"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VIC30_07765"
     CDS             complement(<1..579)
                     /locus_tag="VIC30_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEY7804312.1"
                     /translation="MAERLKGNDAGAWLHKLKPSNSNTRISVGGGPSARAGLGSGGRS
                     VANPSQSGSPDNLGLTSDRLRLRMVERVRQQGVEHEGVLNALATVYRHRFVDPALASR
                     AYEDGALPIGHGQTISQPWVVARMLAALCEQQVPTRVLEIGTGCGYQAAVMANVFAHV
                     YTIERVRPLYDIAKARLRDAGLRNVHCQFGDGM"
     gene            complement(564..1307)
                     /gene="surE"
                     /locus_tag="VIC30_07770"
     CDS             complement(564..1307)
                     /gene="surE"
                     /locus_tag="VIC30_07770"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006219729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEY7804313.1"
                     /translation="MRILVSNDDGYSAAGIEALAEVLAPHAEITVVAPEVNHSGASNS
                     LTLNRPLSVRQAKNGYWVINGTPSDCVHIALTGLLDFKPDLVVSGINNGANMGDDTIY
                     SGTVAAAVEGHLFGIPSMAFSLTDKGWPHIEDAAQACRDLVLRFMRDKLPANVLLNVN
                     LPPLPAAQIQGVTTTRLGKRHASQPVIPAQNPQNETVYWIGAAGHAQDDSEGTDFHAV
                     ANGMISVTPLRLDLTHDQQLERVTTWLSA"
     gene            1544..2173
                     /gene="plsY"
                     /locus_tag="VIC30_07775"
     CDS             1544..2173
                     /gene="plsY"
                     /locus_tag="VIC30_07775"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEY7804314.1"
                     /translation="MAGFESGFAGLVGFAVMGYLLGSIPFAVVTSRLMGLSDPRTYGS
                     GNPGATNVLRTGNKTAALLTLLGDAAKGWFAVWLANHFTATPDIVAITAVAVFLGHLF
                     PIFLGFKGGKGVATAFGVLLAVEPVLGIATLLTWVIVAFFFRMSSLAAMAAALFAPFY
                     FLILSGVLWPASPIMIVALSIISLLLIWRHRANITRIANGTEPRIGKKG"
BASE COUNT          509 a          634 c          578 g          555 t
ORIGIN      
        1 catgccatca ccaaactgac agtgtacgtt acgcagtccc gcgtctctta atctagcctt
       61 agcgatatcg tacaacggac gaacccgctc aatggtgtag acatgggcaa acacgtttgc
      121 catgacagcg gcctgatagc cacaccctgt gccaatctct aaaactcttg taggcacctg
      181 ttgctcgcac aaagccgcca acattctggc aaccacccaa ggctgtgaaa tagtttgacc
      241 atgaccgatc ggtaaagcac cgtcttcgta ggcacggctc gctaaagctg gatccacaaa
      301 cctgtgccga tacaccgttg ccaatgcatt gagcacaccc tcgtgctcaa caccttgttg
      361 cctgacccgc tcaaccatgc gcaaacgcaa gcgatcagag gtcaagccaa ggttgtccgg
      421 tgatcccgac tgggacggat ttgctacaga acgacctccc gaacccagac ctgcgcgcgc
      481 actaggaccg ccacccacac taatacgggt gttgctatta gaaggcttta gcttatgcag
      541 ccaagccccc gcatcgttgc cttttaggcg ctcagccatg tagttacgcg ctcaagttgt
      601 tgatcgtgcg ttagatcgag tcgcagtggc gtcacagaaa tcatgccatt ggccaccgca
      661 tggaaatccg tgccttcaga gtcatcttgt gcgtggccag cagctccaat ccagtacacc
      721 gtttcgttct gagggttttg tgcggggatc accggctgtg aggcgtgtcg tttacccaga
      781 cgtgtggtgg taacgccttg aatctgtgcg gcgggaagtg gtggcaaatt gacattgagc
      841 aatacgttgg ccggcaattt gtctcgcata aaacgcagca ccaagtcccg acacgcttgc
      901 gcggcatctt caatgtgcgg ccaacccttg tccgttaaag aaaacgccat cgagggaata
      961 ccaaacaagt gcccttcaac cgcagcggcg acagtaccag aataaatcgt gtcatcgccc
     1021 atattggcgc cattgttaat gccagagacc actaagtcgg gtttgaaatc caacagtcct
     1081 gtcaaggcga tgtgcacgca gtccgatggc gtaccgttga tcacccaata gccgttcttg
     1141 gcttgtctga cgctaagcgg tcgattcaat gtcagggagt ttgatgcgcc actgtggttg
     1201 acttccggtg ccacgaccgt aatctcagcg tgtggtgcaa gcacctcagc caacgcttcg
     1261 atacctgctg cactgtagcc gtcgtcgttt gaaaccagaa ttctcatcag atgcgccatg
     1321 taaattaacg atgtttattg tactcggcta tgcgtggcaa cgatgtgacg cgagcgcccg
     1381 accatgcctt aaactgtgtg tcatcgacaa caagtaccgt tcaaattatt cgttcgtaga
     1441 ttagatcgtc attcgggctg cgcaagaggc taatcgatga gggctaggtc attgacttac
     1501 accaatatct gcacggttaa acgcactttg atgggtagga agtatggctg ggtttgagtc
     1561 aggatttgca gggctggtgg ggttcgctgt gatgggctac ctgctcggat caatcccgtt
     1621 tgcggtagta accagccgct tgatgggtct atctgatcca cgcacctatg ggtccggcaa
     1681 cccgggtgcc accaacgtac tacgtaccgg caacaagaca gctgcgctac taacactgct
     1741 aggcgatgcc gcaaaaggct ggttcgcggt ctggcttgca aaccacttca cagccacacc
     1801 tgacattgtg gccatcaccg ctgtggctgt attcttaggt cacttgtttc ccatctttct
     1861 gggtttcaaa ggtggcaagg gtgtggccac tgccttcggc gttttactgg ccgtcgaacc
     1921 agtgctaggc atagcgactt tgctaacctg ggtcatcgtg gcctttttct ttcgcatgtc
     1981 gtcacttgca gccatggctg cagctttgtt cgcgcccttt tacttcctca ttctttctgg
     2041 tgtgctttgg ccggcctcac cgatcatgat cgtggcgtta tcaatcatca gcctgctgtt
     2101 gatctggcgt catcgagcca acattacccg catcgccaac ggtacagagc cgcgtatcgg
     2161 taaaaaaggt tgaccgatcc ttagttatca atccttagtt gaccatcact taggcttgca
     2221 acgtgtcaat ttctgacaat ggccaacgtg gcattaccgt aaacgcaggc gagcgc
//
LOCUS       DATBNL010000446         2967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124939, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000446 DATBNL010000000
VERSION     DATBNL010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124939"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1143
                     /locus_tag="VIC30_07780"
     CDS             <1..1143
                     /locus_tag="VIC30_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HEY7804315.1"
                     /translation="SVMAKRVALGRMAHEAAVCSVPVAGQPLAFYMGCDARNEYIYKF
                     VTDAVWDPADVGRGMAAGDKYLTEGTLYVARFGDDGMGQWIELTIDDPRIKGYEAYAF
                     ANQADVLVNTRYAADAVGATRMDRPEWGAVNPRNGEVYFTLTNNSSKNRQVGTVNAAN
                     PRAYQDEDGNQRNGNPNGHIIRFKELDSLATASGFEWDIFLFGAEDDMPADVNVSQLT
                     QSNAFSAPDGVWFSPTTGILWIQTDDGAMTDETNCMMLAAIPGEVGDGGPVTIRNDFK
                     GEQGSQNTFVGALLGQARLKRFLVGPKGSEITGLTETADGRALLVNIQHPGEKSKGLT
                     DAAALQSHWPAQSDDGQQYGQQYGPGERPRSATIAIWRSDGGVIGI"
     gene            complement(1159..1614)
                     /locus_tag="VIC30_07785"
     CDS             complement(1159..1614)
                     /locus_tag="VIC30_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013588002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY7804316.1"
                     /translation="MREIEFAELTSLVGTTMGTSDWWLVDQERINQFAQATGDFQWIH
                     VDVERARASKFGTTIAHGYLTLSMLAGMRFQTFDVTGINMAVNYGMNKVRFLTPVPSG
                     SRTRAVFELIAANPRSDGGLECTFKATVELENATKPACIAETMTVYYPG"
     gene            complement(1729..2421)
                     /locus_tag="VIC30_07790"
     CDS             complement(1729..2421)
                     /locus_tag="VIC30_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016454373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7804317.1"
                     /translation="MASQQKAKTHKNISDHIRSDIAEQISQGLLAPGDTIDENEIASR
                     YGVSKTPVREALLQLKAQGLISNLPRGGAIVAKMDLSQLLSLWEWLAEIEAVAVKLAC
                     ERMSAKELEQLEQIHDQSQAFADKEDWDGWQTCNQNFHQALYASSRNAFLRQEVMRVR
                     ARTGVYRRHAFGALGATQTSFTQHGEILGFLKARDGEGAASAMRRHILPASNTTALTN
                     FILNIPKDLLAR"
BASE COUNT          667 a          741 c          835 g          724 t
ORIGIN      
        1 tcggttatgg ccaagcgggt ggcacttgga cgtatggcgc atgaggcggc tgtttgttcg
       61 gtgccagtgg ctggtcagcc gttggctttt tacatgggct gcgatgctcg caatgaatac
      121 atttacaaat tcgtaaccga cgccgtttgg gatccggccg atgtgggtcg aggcatggcc
      181 gctggtgaca agtacctaac tgaaggcacc ctctatgtgg ctcgtttcgg tgatgacggc
      241 atgggtcaat ggattgaatt gacaatcgat gacccgcgta tcaagggtta tgaggcctat
      301 gcctttgcca atcaggccga tgtgctcgtc aatacgcgat atgcggcaga tgcagtcggt
      361 gccacgcgca tggatagacc cgaatggggg gcggtgaacc ctcgcaatgg cgaggtctat
      421 ttcactttga ccaacaacag cagtaagaac cgtcaggtcg ggacggtgaa tgcggccaac
      481 ccacgtgcct atcaagacga agatggcaat cagagaaacg gcaatcccaa cggccatatc
      541 atccgattca aagaattaga tagcctggcc actgcttcgg gctttgagtg ggacattttt
      601 ctgtttggtg cagaggatga catgccagct gatgtcaacg tatcgcagct tactcaatcc
      661 aatgcattct cggcaccgga cggtgtttgg tttagcccga caactggcat cttgtggata
      721 caaaccgatg atggggcgat gaccgatgag accaattgca tgatgcttgc tgccataccg
      781 ggggaggtcg gtgatggtgg tccggtgacc attcgtaatg acttcaaggg tgagcaaggc
      841 tcacaaaaca cgtttgtcgg tgccttgctc ggtcaggcta gactaaagcg ctttttggtg
      901 gggcccaagg gttcggagat taccggctta acggagactg ccgatggtcg ggcgttgcta
      961 gtcaacatcc agcacccggg tgagaagtcc aaaggattga ctgatgcagc cgcgttgcaa
     1021 agccattggc cagctcagtc agatgatggg cagcaatacg ggcagcagta tgggccggga
     1081 gagcgaccgc gttcagccac cattgccatt tggcgctctg acggtggcgt gatcggtatc
     1141 tagacgattg ttagacgctc agcccggata gtagaccgtc atggtctcgg cgatgcaagc
     1201 gggtttggtc gcgttttcta gttcgacggt ggctttgaaa gtgcattcca gaccaccatc
     1261 actgcgcggg tttgctgcga taagctcaaa caccgcgcgc gtgcgactgc cacttggtac
     1321 aggtgtcagg aatcggactt tgttcatgcc gtagttgaca gccatgttga tcccagtgac
     1381 atcgaatgtt tgaaaccgca tgccggccaa catcgacaaa gtcaggtagc cgtgggcaat
     1441 ggtggtgcca aacttcgatg cccgagcgcg ctcaacatcg acgtgtatcc actgaaaatc
     1501 ccccgtggct tgggcaaact gattgattct ttcctgatca actagccacc agtcgctcgt
     1561 acccatggtc gtgccaacta ggcttgtcag ttcagcaaac tcgatctctc tcatgtcttg
     1621 ggtccccgtg gttaaagttg ttgccaactt ttgtagcaca acggatctct gcgcatggtg
     1681 aggtcgttaa tgagtcaacg ctgatttccc agcgtcattt tcagggggct acctagccaa
     1741 taaatccttc gggatgttca agatgaagtt ggtgagcgcc gtggtgttac tggctggcag
     1801 tatatggcgc cgcatggcac tagcggcacc ttcgccatcg cgtgccttta aaaacccgag
     1861 aatctcacca tgctgggtaa atgatgtttg cgtggcgccg agtgcgccaa acgcatggcg
     1921 tcgatacacg ccagttctag cccgcactcg catgacctct tggcgcaaga atgcattgcg
     1981 tgagctagcg tataaagcct gatgaaagtt ctgattgcaa gtttgccagc catcccagtc
     2041 ttccttgtcg gcaaaggctt ggctttggtc atgtatttgc tcgagttgtt cgagttcttt
     2101 ggcggacatg cgttcgcagg cgagtttgac ggcaacggct tcgatttcgg cgagccattc
     2161 ccaaaggctg agcagctggg acaaatccat ctttgcgacg atggcgccgc cccgtggcag
     2221 attactaatc aagccttggg ctttgagctg cagtaatgct tcgcgtaccg gtgttttaga
     2281 cacgccgtag cgactggcaa tttcgttctc atcaatcgtg tcgccaggcg ctagcagccc
     2341 ttggctgatt tgctcggcaa tgtcactgcg gatgtgatcg ctgatatttt tatgagtctt
     2401 ggctttttgt tggctagcca tggcacacct cttagacaat ggcgtggaaa taaacaaaat
     2461 aacagcttgt tgccatttct tattttaatg cttgataaaa atctgccaat gcactacaaa
     2521 tatatttatc acacatataa aaatttaaga gttccgattg agtgacgcag acaacgcttt
     2581 caagctcctg cgtggtgaga taaacgccga gcagtattgg catgagtcgg ggcaacagca
     2641 agtcaggtcg gcgggggtcc tcttgacaga gcagcaacaa gtacgggcct gtaaaaacct
     2701 gacccgaatg gcagctgcta tcaggcaaca agtgtctgag tcttccttac ttgactcatc
     2761 acttgactca gcacttgacc taaaccagca agctgttgat ggttccgaca accaatacgc
     2821 attcgacgat tacctggcct cgttgcgatg agaacagacc tgcccttgac catcgacggg
     2881 ttggttggtg ctgtgcgcgc aggtgaacta acgatggcgc gcgcttggga tgcccagcaa
     2941 gcccagtttg cgcagacgaa tgcgctc
//
LOCUS       DATBNL010000447         2964 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105038, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000447 DATBNL010000000
VERSION     DATBNL010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2964
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105038"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..664
                     /locus_tag="VIC30_07795"
     CDS             248..664
                     /locus_tag="VIC30_07795"
                     /inference="COORDINATES: protein motif:HMM:NF019009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system CcdA family
                     antitoxin"
                     /protein_id="HEY7804318.1"
                     /translation="MSGTAQLNTRIQLNEARRGLNGMCGLDYVHEIMCIGKVMTDSQI
                     NRSIRANAAGKRAVNLSLSKDVLIAAKELGINISEVCDSHLREIVRGELQRRWKVDHA
                     EFIAAYNETVDKEGLPLEQWRGFHRPQQSLNTTAHD"
     gene            complement(760..1677)
                     /gene="cysM"
                     /locus_tag="VIC30_07800"
                     /pseudo
     CDS             complement(760..1677)
                     /gene="cysM"
                     /locus_tag="VIC30_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248819.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase CysM"
     gene            complement(1808..2299)
                     /locus_tag="VIC30_07805"
     CDS             complement(1808..2299)
                     /locus_tag="VIC30_07805"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF655 domain-containing protein"
                     /protein_id="HEY7804319.1"
                     /translation="MQINCPPSHHRLSLLATVGCGSRRVLRYVLRCVLRYGSAAVLLL
                     VSSASLAGVDVNHANAQELEQIKGIGAKTAQRIIVERTRGPFESLEHLSERLSGIGPK
                     TVSKLRAGGLCAGTPQAPCAATKTVAMNKRTGSKRNESKRTSNRNRVPSALLVTPEIL
                     QLQ"
     gene            2418..2594
                     /locus_tag="VIC30_07810"
     CDS             2418..2594
                     /locus_tag="VIC30_07810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804320.1"
                     /translation="MGVMIGAVLMDVVVMDVVVMDVAMGTEGYCSMGTALQHPSLLHC
                     QSRFYSTNAPDSIW"
     gene            complement(2561..>2964)
                     /locus_tag="VIC30_07815"
     CDS             complement(2561..>2964)
                     /locus_tag="VIC30_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003799154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY7804321.1"
                     /translation="GWDGYPDGGQQRDFISVDDVVSVNLHFLDHPQTSGIFNCGTGRA
                     QPFNDIASSVVNGIRQARDKPLLSLEDMVAQQILRYMPFPEDLKGRYQSYTQADVSRL
                     RAAGYDKPFKDVRTGVADYVRYQIESGALVL"
BASE COUNT          700 a          806 c          798 g          660 t
ORIGIN      
        1 ggccccgcaa ttaactgatg atacgtgtgt gccaaaggcg cgtatgtgtc gagcgctgga
       61 cgggcaccaa ccaagaccca ttttgtagca tccagtacaa ttattggcgt caggcgcaat
      121 agcgcgtttg attgtgttag cacaacacga agccgtttgg ggatttttga ccccagacgg
      181 cttcgtcgtt attggagatc aatagttgcg taaattagtt actgtcgaga gtttgggagc
      241 ccgccctttg agcggaaccg cacaattaaa tacccgcatc caactcaatg aggcaagacg
      301 tggactaaac gggatgtgcg gattagacta tgtgcatgaa attatgtgca taggtaaggt
      361 catgactgat tcgcaaatca atagaagtat tcgtgccaat gcagcaggaa agcgtgcggt
      421 aaatctgagc cttagcaaag atgtgctgat cgctgcgaaa gagcttggca tcaatatctc
      481 agaagtttgc gattcgcatc ttcgtgaaat cgtacgaggt gagctgcaac gccgctggaa
      541 agtcgatcat gccgagttca tcgcggcgta caacgaaacg gtcgacaaag aaggactgcc
      601 acttgaacaa tggcgaggtt tccacagacc tcaacaaagt cttaacacaa ccgcccatga
      661 ttaatacgtc gcacaatcac ccgatagcaa acccaaacaa gtacgcaacc acttgaaagc
      721 ccaaccttca cggtgatcaa tatctttcga gtgatttgtc taaggattaa aaatcccggt
      781 tgaaaggtat cggtcgcccc ggtcgcagac gataaagaca atcgtagcgt cacgcacgtc
      841 ggctgccacc cttagcgcag cgattaaggc tccggcagcc gagacacctg agcagatgcc
      901 ctcttcagcg gccaagcgcc tggccatggc ttcggcctcg gtctgctcaa tcagttcgaa
      961 ccgatcgaca tggctggcgt tctagatttt ggggagggag gcttcgggcc acttccgaat
     1021 acccgggatt tgtgagcctt cagctggctg cgcccccaca atctgaatat ccggattcat
     1081 gaactttagg aacttagacg tccccatgat ggtaccggtg gtgcccatgg ccgacacaaa
     1141 atgcgtcaca cgaccaccgg tctggcgcca gatctctggc cccgtagttt taaagtgtgc
     1201 cagcgggttg tccgggttgg caaactgatc aagcacaatg cccttgcctt cgtcttgcat
     1261 gcgggcagcc agatcgcggg cgtattccat gccaccttgg tcggctggcg tgagaatcaa
     1321 ttcagcacca taagccgtca tggacgagcg tcgctcaagc gacaagttat ccggcatgat
     1381 caagaccatc ttgtagccgc gcatggcagc caccatcgcc agcgcaatac ccgtgttgcc
     1441 actggttgct tcaatcaacg tgtcgcctgg cttaatgtcg ccacgctttt ctgcttccat
     1501 gatcatcgac aacgccggac gatccttgac cgaaccagcc gggttattac cctccatctt
     1561 gccaaggatg acattgccac gtgcttggcc ggcttcacca ggcaggcgct gcaagcgcac
     1621 aagcggcgtg ttgcccacga gttgctcaag tgtggcgtag ttgttggagt cagacatgga
     1681 aatatcctgt gcaagtcaag ccaataaaac tcgattgtag tgaaacgccg tcctctagat
     1741 gcaggaacca acaacgccca acatggtttg aacccgagcc gagcaacggc tgcgctttac
     1801 ccccaaccta ctgcaactgc aaaatctccg gtgtcaccag cagtgcgctt ggtactcggt
     1861 tgcggttcga tgtgcgtttg gactcatttc gctttgaccc agtccgttta ttcatcgcca
     1921 cggttttcgt ggcagcgcac ggtgcttgcg gtgtacctgc acacaagccg ccggcacgca
     1981 gctttgatac cgttttagga ccaatgcctg agagccgttc ggacaaatgc tcaagtgact
     2041 cgaacgggcc acgggtgcgc tcgacaatga tacgttgcgc ggtcttcgca ccaatgcctt
     2101 tgatttgctc aagctcttgc gcgttggcgt ggttgacatc gacgccagcc aaacttgcac
     2161 tgctcaccaa gagcagcact gcggcgctgc cgtacctaag cacgcacctg agcacgtacc
     2221 tgagcacgcg cctagatccg caaccgacag tcgcaagcaa agacaatcga tggtgtgatg
     2281 gtgggcaatt aatttgcatg gttaacctcc gtttaacgaa ggcgacatct tgcccgctgc
     2341 gcacgggtaa atcaatgacg gcaaatacgc acatgcgcgc caccattcaa tggtagctgg
     2401 tggtggtagg tgcggtgatg ggtgtgatga taggtgcggt gctgatggat gtggtggtga
     2461 tggatgtggt ggtgatggat gtggcgatgg gtactgaggg gtactgctcg atgggtaccg
     2521 cgctgcagca cccatcattg ctgcattgcc agagccgttt ctacagcacc aatgcgccag
     2581 actcgatctg gtagcgcaca tagtcagcca cacccgttcg cacgtcttta aaaggcttgt
     2641 cgtagccagc agcacgcagg cgcgagacat cggcttgcgt gtagctttgg tagcggcctt
     2701 tcaaatcctc gggaaacggc atatagcgca agatctgctg cgccaccata tcctcaagac
     2761 taagcagtgg tttgtcacgt gcttggcgaa tgccattgac tactgagctg gcgatatcgt
     2821 taaagggctg cgcacggcct gtgccgcaat taaatatccc gctggtctgg gggtggtcta
     2881 aaaaatgcag attcaccgac accacatcgt caaccgaaat gaagtcacgc tgctggcctc
     2941 catcgggata accatcccaa ccgc
//
LOCUS       DATBNL010000448         3195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_124975, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000448 DATBNL010000000
VERSION     DATBNL010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124975"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VIC30_07820"
     CDS             complement(<1..724)
                     /locus_tag="VIC30_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY7804322.1"
                     /translation="MTSALSPIYGRLPVAFERGQGVWLWDTEGRRYLDGLAGIGVSCL
                     GHAHPALVKAIADQAAKVIHTSNIYNIPLQAELAERITAISGMSEVFFVNSGAEANEG
                     AIKLARLYGHMKGVKLPTIITMDSAWHGRTLGTLAATGSEKARQGFGPLPDGFLQVTY
                     NSLEAVRQAADECPDVVAILVEVLQGEGGIRPSDLAYLKALRQLCDDNNWLLMVDEVQ
                     SGIGRTGKWLAHQWAEVLPDVVT"
     gene            868..1203
                     /locus_tag="VIC30_07825"
     CDS             868..1203
                     /locus_tag="VIC30_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3579 domain-containing protein"
                     /protein_id="HEY7804323.1"
                     /translation="MSDSPIYFVILGQTLQGQRFRPSDWAERLAGVMAPYRPPGAGAG
                     PLTYSPYVVPRVIDGVKCVVVDERLRDIEPLAWKFVHDFATDNHLQTLKDIHDVATGV
                     TSALPPKKA"
     gene            complement(1152..2111)
                     /locus_tag="VIC30_07830"
     CDS             complement(1152..2111)
                     /locus_tag="VIC30_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEY7804324.1"
                     /translation="MVSKPKILQIGSLGGSPGADQYLNEHFDVITLWDSDDVAQTLRE
                     ARDVEVVVTSAMHGCKADVIEALPKLKLICNWGVGYDTIDIDAAAKRSIAVTNTPEVL
                     IDCVADEAWGLMIACARHIPLGDRFVRANRWENHDGVMPLGTRVSGKKLGIIGLGRIG
                     MAIAKRGQGFDMQVAYHNRSARTDVPYTYMDTLTALAQWADFLVVATVGGASTKKLVD
                     RAVLTALGPNGYIINIARGPVIDEAAMVQLLQSGELGGAGLDVFENEPAVPHELKKMD
                     NVVLMPHVGSATRETRQAMFEVVTANLQAFFGGKALVTPVATS"
     gene            complement(2621..2884)
                     /gene="rpsT"
                     /locus_tag="VIC30_07835"
     CDS             complement(2621..2884)
                     /gene="rpsT"
                     /locus_tag="VIC30_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013211618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEY7804325.1"
                     /translation="MANTAQARKRARQAVARNLHNSSLRSMLRTSIKRVRAAVATGDK
                     EAANDAFRKTMSVIDSVADKKIIHKNKAARQKSRLSAAVKALG"
BASE COUNT          744 a          870 c          855 g          726 t
ORIGIN      
        1 atgtcacgac gtctggcaac acctcggccc actgatgggc aagccattta ccagtgcgtc
       61 cgatgcccga ttgcacttca tcaaccatga gtagccagtt gttgtcatcg cacaattgac
      121 gtagcgcttt gagataagcg aggtctgaag gccgtatacc gccttcacct tgcaggactt
      181 ccaccaaaat agcgaccaca tccgggcatt cgtcggcggc ttggcgcacg gcctcaaggc
      241 tgttgtaggt gacctgcaga aaaccgtctg gcagtggccc aaaaccctgg cgcgcttttt
      301 cgctaccagt ggcagccagc gtgcctagcg tgcgaccgtg ccaagccgaa tccatggtga
      361 tgatggtcgg cagcttcaca cctttcatgt gcccgtaaag tcgtgcgagt ttaatggcac
      421 cttcgttggc ttcagcaccg ctattaacaa aaaatacctc tgacatgcca gagatggccg
      481 tgatgcgctc ggcgagctcg gcttgcaagg ggatgttgta gatattggaa gtatgaatca
      541 ctttagccgc ctgatcggcg atggctttca caagcgcagg gtgagcgtgc ccgaggcacg
      601 acacaccaat gccagccaat ccgtctaggt agcgccgacc ctctgtgtcc cacaaccaaa
      661 cgccttgacc acgctcaaac gcaacgggca gtcgaccata aataggggat aaggcagaag
      721 tcatgacgaa tatctctatg taagggcaat taataagcca aagcgtcggg caagatgcaa
      781 tgggtaaacc ctaatcatat acaatcgcaa ccatgcctgt gcgaatcggc tctgtactgg
      841 gtgtcgattc tccgttgaga tgtctgaatg agtgattccc cgatatattt cgtcatccta
      901 ggacaaaccc tgcaaggtca gcggtttcgt ccaagcgatt gggctgagcg cctagcaggt
      961 gtgatggcac cctaccgtcc accgggcgct ggtgccggcc cactgacgta ctcaccgtac
     1021 gttgtgccgc gtgttattga cggcgtgaaa tgcgtggttg tcgatgagcg tttgcgcgat
     1081 attgaaccgc tggcgtggaa attcgttcat gacttcgcca cagacaatca cttgcaaacg
     1141 ctaaaagaca ttcatgacgt cgctacgggc gtcaccagcg ccttaccacc aaagaaagcc
     1201 tgaagattag cggtcaccac ctcaaacatc gcttggcggg tttcgcgcgt ggcgctaccc
     1261 acatgaggca tgagcaccac gttatccatt ttctttaact cgtgcggcac cgctggctca
     1321 ttctcaaata catcgaggcc tgcaccgccg agttcaccgc tttgcagtaa ttgaaccatc
     1381 gctgcttcgt cgatgacagg gccgcgggcg atgttaatga tgtatccatt gggacctagc
     1441 gcggtcaata ccgcgcggtc aacgagcttt ttagtactag cacccccgac ggtcgccacc
     1501 accaaaaaat cagcccattg cgccagcgca gtcagcgtat ccatgtaggt gtatggcaca
     1561 tcggtgcgcg ctgagcggtt gtgataagcc acttgcatgt caaagccttg gccgcgctta
     1621 gcaatggcca taccgatacg acccaagccg ataatgccga gtttcttgcc gcttacgcga
     1681 gtgcccaagg gcatcacgcc gtcgtggttt tcccatcgat tcgcgcgcac gaagcggtcc
     1741 cccagtggaa tgtggcgtgc gcacgcaatc atcagccccc aagcttcgtc tgctacgcaa
     1801 tcaatgagga cctctggcgt attggtcacc gctatagagc gcttggccgc tgcgtcaatg
     1861 tcgatggtgt cgtaacccac accccagtta cagatgagtt tcagtttagg caacgcttca
     1921 atgacatcgg ctttgcagcc gtgcatggcc gatgtgacca caacctcaac gtcacgggcc
     1981 tcacgcagtg tttgcgccac gtcgtcagaa tcccataggg tgatgacgtc gaagtgttca
     2041 ttcagatact ggtcggcacc aggcgacccg ccaagggatc cgatttgcag gattttaggt
     2101 ttgctcacga tagaaagctc cacggcattc agaagtcaat acacgatgct aggctgatgc
     2161 gtgggtttag gcaagtgcgg caagtcgcac agcggcgagt tacgcgctga gcaggatgaa
     2221 atgttggaaa atctatacaa gccgttgtag atagctgttg tgctttctgg ctagtggtta
     2281 gctatcagtg caaaaacagg cgcaaaaaac agagcacaaa aaaacagacc taaacaggtc
     2341 tgtttcgcta cagattgcca acatcagcag tggccgtgat gtaccacgag ggacagggct
     2401 acttaaggga ctacctaggg gactacctag gggactaccc acaggactac cgacacggtt
     2461 aacgactgtt atctctgcat atgccatcta acaggccgga ttagcctttc gctgagccgg
     2521 ccttggaaag aagcgtggat tagatacagc caggcttcag gtgaggcagt cgttggatct
     2581 aaagccctga agccctataa agccctgaag cttcaaacct ttaacccagc gccttgacgg
     2641 cagctgacag gcggctcttt tggcgagcag ccttgttttt gtggatgatt tttttgtcag
     2701 ccacgctgtc aataacgctc atggtcttgc gaaacgcgtc attcgcagct tctttgtcgc
     2761 cagtggccac ggcagcgcga acacgcttga tagaggtgcg cagcatcgag cgcagacttg
     2821 agttgtgcag gttgcgtgcg acagcttggc gtgcacgttt tctggcttgg gcagtattgg
     2881 ccatttgtag attgctatcc tgtaattcga aattttttga cggaatttat aacggaattt
     2941 ccaaataatc cgcgattcta gcatgtacag agagcgtctg gctacctttt ctcgcgtatg
     3001 acttgcgtat gaagcaagtc aaaggggggg catttgacca gtttgatctt aatgctgtgg
     3061 cgcacgccga aagtcgctca cgcgcatacc caaaacccag agggtcgcca agtagctcgc
     3121 cattgccgcg gacaggctca gtgctaacca gccggctcgt tgccatatgc ttagctcggc
     3181 tgacgtccag tcgag
//
LOCUS       DATBNL010000449         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_95031, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000449 DATBNL010000000
VERSION     DATBNL010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95031"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..1341)
                     /gene="hemL"
                     /locus_tag="VIC30_07840"
     CDS             complement(58..1341)
                     /gene="hemL"
                     /locus_tag="VIC30_07840"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEY7804326.1"
                     /translation="MTTNAELFERACRSIPGGVNSPVRAFRSVGGTPRFVARAQGPYF
                     WDAEGKRYIDYIGSWGPAILGHAHPEVVKAVQDAAVHGLSYGAPTEAEIQIAELLIER
                     LPSMDQVRLTSSGTEATMSAIRLARGATGRNKIIKFEGCYHGHADSLLVKAGSGLLTF
                     GNPTSAGVPPEFVAHTLVLDYNDSDAVREAFATHGKDIACVIVEPMAGNMNLVKPQPE
                     FLQTLRAMCTEHESVLIFDEVMTGFRVGPQGVQGVLGVKPDLTTLGKVIGGGMPVGAF
                     GGRADIMSHIAPLGGVYQAGTLSGNPVAVAAGIKTLELIGEPGFYDRLGTQTRKLTEG
                     LVDRAHAHGVTLSADHEGGMFGVYFTPEVPKTLQEVSAGNIEQFKLFFHGVLDRGVYF
                     APSAFEAGFVSATHDDDVIAATLTAADEVFKSLAQ"
     gene            complement(1331..2005)
                     /gene="thiE"
                     /locus_tag="VIC30_07845"
     CDS             complement(1331..2005)
                     /gene="thiE"
                     /locus_tag="VIC30_07845"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEY7804327.1"
                     /translation="MYGVTPDWDDNAKLVAAVEAAAAGGMRALQLRHKSASAKQRLEL
                     AQTLLPICRRWQIPLIINDDWQLALTVDADGVHLGKDDDDPAHVRAEIGHDKVLGVSC
                     YSDLDRAQQMLEIGVDYVAFGAMFASGTKPQATSAALSTIADACALTEQIAPQAGVVA
                     IGGITVDNAASVLAAGARSLAVVGGLFNTHDIQTTARAFSALMTPPGTDNTGGASIEA
                     GEPNDH"
BASE COUNT          431 a          591 c          560 g          424 t
ORIGIN      
        1 tggaacgacg agattgacag ccatgtctca ccccttgtgg gcctgttgtt ggttcagtta
       61 ttgggccaaa gacttaaata cctcgtctgc ggccgttaat gtggcggcga tgacgtcatc
      121 gtcatgggtg gcagacacaa aaccggcttc aaacgccgat ggcgcgaaat aaacgccacg
      181 atcaagcacg ccatgaaaaa acagtttgaa ttgctcgatg ttgcccgccg agacctcttg
      241 cagcgtttta gggacctcgg gcgtgaagta cacaccgaac atgccaccct cgtggtcggc
      301 actaagcgtc acgccatggg cgtgggcgcg atccaccaaa ccttcggtta atttgcgggt
      361 ttgtgtgccg agccggtcat agaaaccggg ctcgccaatc aattcaagcg ttttaatgcc
      421 agccgctact gcaactgggt tgccagacag ggtaccggcc tggtagacgc caccgagcgg
      481 tgcgatgtgg ctcatgatgt cagcgcgccc gccaaacgcg ccaacaggca tgccaccgcc
      541 gatgactttg ccaagcgtgg tcaaatcagg tttaacaccg agcacgccct gcacgccttg
      601 aggaccgaca cggaatccgg tcatgacctc atcaaaaatc agtaccgact catgttcggt
      661 acacatggca cgcaacgtct gtaaaaactc aggctggggc ttgaccagat tcatgttgcc
      721 ggccatgggc tcaacgatca cacaggcgat gtccttgcca tgtgtggcga aggcttcgcg
      781 cacggcgtcg ctgtcgttgt agtcaagcac cagggtgtgc gccacaaact caggtggcac
      841 gccggccgag gtcgggttgc caaatgtcag caaaccggaa ccggctttca cgagcaggct
      901 atcggcatgc ccgtgataac agccttcaaa tttgatgatt ttgttgcgcc cggtggcacc
      961 acgtgccaag cggatggcgc tcatggtggc ttcggtgcca gagctcgtca aacgaacctg
     1021 atccatactt ggcaggcgct cgattagcag ttcggcaatt tggatttcag cttcggtagg
     1081 tgcgccatac gacaggccat gcaccgccgc atcttgtacg gctttgacca cttctgggtg
     1141 agcgtggcca aggatggcgg ggccccaaga gccaatgtag tcgatgtagc gcttgccctc
     1201 tgcatcccaa aaatacgggc cttgcgcgcg cgccacgaat cgtggtgtgc cgcccactga
     1261 ccgaaaggcg cgcactggcg agttcacgcc acctgggatg ctacgacaag ctctttcaaa
     1321 tagttcagca ttagtggtca ttcggctctc ctgcctcgat agaagcacca cctgtgttgt
     1381 ctgtcccagg tggtgtcatt agcgcgctaa aggcacgcgc tgtggtttga atatcgtgcg
     1441 tattaaatag gccaccgaca acagctaggc tgcgtgcacc agcggccagt acgcttgcgg
     1501 cgttgtccac ggtgatgcca ccgatggcaa ccacgcccgc ttgcggcgca atctgctctg
     1561 tcagtgcgca tgcatccgca attgtgctta gcgcagcact cgtggcctgt ggtttggtgc
     1621 ctgaagcgaa catggcccca aatgcgacgt agtccacgcc aatttccagc atttgttgcg
     1681 cgcgatccag gtcgctgtaa caagacacac ccaaaacctt atcgtgccca atttcagcgc
     1741 gcacatgagc agggtcgtcg tcgtctttac caagatgcac gccatcggcg tccacggtca
     1801 aggccaactg ccaatcatcg ttgatgatca gaggaatctg ccaacgacgg caaatcggca
     1861 acagcgtttg agccagttcg agtctttgct tggcactggc gcttttgtga cgtaactgca
     1921 gtgctctcat gccaccggct gccgccgcct caacggcagc caccaacttg gcgttgtcgt
     1981 cccagtctgg cgtcacgcca tacaag
//
LOCUS       DATBNL010000450         2026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_35213, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000450 DATBNL010000000
VERSION     DATBNL010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35213"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1952)
                     /gene="priA"
                     /locus_tag="VIC30_07850"
     CDS             complement(<1..1952)
                     /gene="priA"
                     /locus_tag="VIC30_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEY7804328.1"
                     /translation="MDSISPTSSPVSSATRYCRVALDVPLSGPFDYLATEPVVAGDRV
                     IVPFGRRRLIGVVTQCDVTPSLAAENIREIEKVLRDLDPLPAKWLELAAFAASYYQRP
                     MGEVVLPALPVPLRRVSSYEGKRAGQQGPVERLKKRLAKSSAQAAPAATVEPIELNEE
                     QLEAVKHITQAQGFQAYMLHGITGSGKTQVYLAAAQAVLARGARVLFLVPEINLTPQF
                     AQALLARLGGVVGIDEVAVLHSRLSDGERLGAWLRAHDGRARIVLGTRLAIFAPMPDI
                     DLIVVDEEHDTSYKQQEGLRYSARDLAIWRARQEQAVVVLGSATPSLETWHKAERGDY
                     QRLGLTKRATAGQLPEVKLVDTRRLKMDQGLSPHLLEAMKVTLSEGRQVLVYLKRRGY
                     APVLHCDSCGWVSQCEHCTAYSVVHRAQGRRMRLHCHHCGAQSAAPPACPVCGDPDLQ
                     PMGRGTQRLEEHLAELFPDARLTRIDADSTRRKGSAEGLFEQVHAGEVDILVGTQMVS
                     KGHDFANLGLVGVINADAMLFSQDFRAPERLFAQLMQVAGRAGRDGKAGLVMVQTGYP
                     EQPLYQALKRHDFEGFAHSLLTERQAAMLPPYSFQALLTAEATELADAIGFLEAARAT
                     ALAWLQAHELHEVVTLYDAVPLRVVRV"
BASE COUNT          450 a          634 c          534 g          408 t
ORIGIN      
        1 acccgcacaa ccctaagcgg cactgcgtca tacagggtaa caacctcgtg caattcatgt
       61 gcctgcagcc atgccaacgc cgtggcacgc gctgcctcta aaaacccaat ggcatcagct
      121 agttctgtgg cttcagcggt caaaagtgcc tggaaactat acggcggcaa catggctgct
      181 tgccgctcag ttagcaggct gtgcgcaaac ccctcaaaat catgacgttt taaagcctga
      241 tacaagggct gctccggata gcccgtttgc accatcacca agccagcctt accgtctctg
      301 ccggcgcggc cagcgacttg cataagctgc gcgaacaacc tctccggtgc ccggaaatct
      361 tgcgagaaca gcattgcatc ggcattaatc acaccaacca acccgagatt cgcaaaatca
      421 tgacccttgg acaccatttg cgtgccaact aaaatatcta cttcgccggc atgcacctgc
      481 tcaaacaagc cctcggcact acctttgcga cgcgtgctgt cggcatcgat acgcgtgagt
      541 cgcgcatccg gaaacagttc agcaaggtgt tcttccaatc gttgcgtgcc gcggcccatg
      601 ggctgcaaat ccgggtcccc acacacgggg cacgccggtg gtgccgcact ttgcgcaccg
      661 cagtgatggc agtgcagtcg catacggcga ccctgtgcgc gatgaaccac actgtaagcg
      721 gtgcaatgct cgcattggct aacccagcca caactgtcac agtgcaacac cggcgcatat
      781 ccacggcgct tcaaataaac cagcacttga cgaccctcag aaagggtcac tttcatggcc
      841 tctagcaaat gcggcgacaa gccttgatcc atcttcaagc ggcgggtatc aaccagcttg
      901 acctctggca attgcccagc ggttgcgcgc ttggttaggc ccaagcgttg gtagtcaccg
      961 cgctcggcct tatgccaagt ctcaagcgac ggcgtggccg acccaagcac caccacggct
     1021 tgctcctgtc tggcacgcca gatcgctaaa tcgcgcgctg aatagcgcaa accctcttgc
     1081 tgcttgtacg acgtgtcgtg ttcttcatcg accacgatca aatcaatgtc cggcatgggt
     1141 gcaaagattg ccaagcgcgt acccaacacg atgcgtgccc gtccgtcatg ggctctcaac
     1201 caagcgccta gtctttctcc gtcagacagt cggctgtgca gcacggccac ttcgtcgata
     1261 ccgaccacac caccgagcct agctaggagc gcttgcgcaa attggggtgt caagttgatc
     1321 tcgggcacca gaaacaacac acgagcgccg cgcgcgagta ccgcttgtgc ggccgccaaa
     1381 tagacctggg ttttaccgct gccggtgatg ccatgcagca tgtaggcttg aaacccttgc
     1441 gcctgcgtga tgtgcttgac ggcctcgagc tgctcttcat tgagctcgat tggctcgacg
     1501 gttgctgctg gagctgcctg ggcactcgat ttagcgagtc gtttttttag gcgctcgaca
     1561 ggcccttgct gacccgcgcg cttgccctcg taactgctga cacgacgcaa cggcactgga
     1621 agtgcaggca agaccacctc gcccatgggc cgctgatagt acgaagccgc aaacgccgca
     1681 agctctaacc actttgccgg cagcggatcg agatcgcgca gaactttctc aatctcgcgg
     1741 atattctctg cggcaaggct tggggtaacg tcgcattgcg tcacaacacc aatgagccgg
     1801 cgtctaccaa aaggcacgat cacccggtcg cccgcaacca ctggctcggt tgccaggtaa
     1861 tcaaagggcc cgctcaatgg cacatcgagt gccacacggc agtagcgtgt ggcactcgat
     1921 accggactcg atgtcgggct gattgaatcc atgagttaaa gtgatttctc ggttatgaac
     1981 gtaacgcgct gagacaggga gagtatttga gagcaagctt attagc
//
LOCUS       DATBNL010000451         2598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_85295, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000451 DATBNL010000000
VERSION     DATBNL010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85295"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VIC30_07855"
     CDS             <1..415
                     /locus_tag="VIC30_07855"
                     /inference="COORDINATES: protein motif:HMM:NF014722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein adenylyltransferase SelO family protein"
                     /protein_id="HEY7804329.1"
                     /translation="RDEQDETLISDCLGLLEDGEMDYTNTFRDLALPSLPDNAAYATE
                     AFQQWHGRWQARLVEQGLPAHEVAARMNRTNPVYIPRNHLVESALDAAESRGNLSQFE
                     TLLQVLGSPYEVQPGREPFAQAGEHNPGYMTFCGT"
     gene            572..1765
                     /locus_tag="VIC30_07860"
     CDS             572..1765
                     /locus_tag="VIC30_07860"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008922256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006083 - acetate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HEY7804330.1"
                     /translation="MSHNTQSHSSLLTLNVGSSSIKFALFDAQALELELSGQITAIGG
                     QTQFAAKAHLDARRFSHDWSDGQPPANHAETIAWLVQWFGEQLAGTTVVAVGHRVVHG
                     GTWFDSPVVVTEQIMAQLRELEPLAPLHQPHNLAGIEAAQAAFADAIHVACFDTAFHC
                     HQPFVKDCFALPRRYYEQGVRRYGFHGLSYEYIAHHLETQFPLQAVGRVVVAHLGNGA
                     SMCAMLNGHSVASTMGFSALDGLPMGTRCGQLDPGVLLYLLQQGMTEPELSDLLYKES
                     GLKGISGISNDMRELESSDALEAKQAIDYFVYRIKRELGALTAALEGLDAVVFTGGIG
                     EHSASVRAHVLQGMTWLGVELDEQANRNHETIISTRRSRVLCLRVPTDEETMIAQHTQ
                     KLMGQ"
     gene            1790..2008
                     /locus_tag="VIC30_07865"
     CDS             1790..2008
                     /locus_tag="VIC30_07865"
                     /inference="COORDINATES: protein motif:HMM:NF027267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0097351 - toxin sequestering activity
                     [Evidence IEA];
                     GO_process: GO:0001558 - regulation of cell growth
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PrlF family
                     antitoxin"
                     /protein_id="HEY7804331.1"
                     /translation="MSQRYRQCKVKRIEASDADDPVLGQFLAFLASGMMQHPDRLQAL
                     DEGLVHRLQSLVGHVEVDLDSALSEDDE"
     gene            2005..2519
                     /locus_tag="VIC30_07870"
                     /pseudo
     CDS             2005..2519
                     /locus_tag="VIC30_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012414.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YhaV family
                     toxin"
BASE COUNT          576 a          651 c          741 g          630 t
ORIGIN      
        1 acgtgatgag caagatgaaa cacttatcag tgattgtctg ggtttgcttg aagatggcga
       61 gatggattac accaacacct tcagagacct agcgcttcca tcactgcccg acaacgcagc
      121 ctatgccacc gaagcattcc agcaatggca tggccgttgg caggccaggc ttgtcgagca
      181 gggtctgcct gcgcacgagg tggccgcacg gatgaaccgc accaatccgg tctacattcc
      241 gcgtaatcat ttggttgaaa gtgcacttga tgcggctgaa tccagaggca atctgtcaca
      301 gtttgagacc ttgctgcaag tgcttggctc accttatgag gttcagcctg gacgtgagcc
      361 ttttgcgcag gcgggcgagc ataatccggg ttacatgacg ttttgtggga cgtagcgcga
      421 acgggctaga cactgatggt catgtggtca tgtggtcatg tggtcatggg tcgttagtag
      481 gatctcgcga gattatttgt tttgacctaa aaacgtaaaa cagttctgag tatgatggtt
      541 tacgttgata tcgtctactg aggtccacac catgtcgcac aacacgcaga gtcactcgag
      601 tttgctcacg ctcaatgttg gctcgtcttc aatcaaattc gctctgtttg atgcgcaggc
      661 actagagctc gagctcagtg gccagatcac cgccattggc ggtcagacgc agttcgcagc
      721 taaggcacat ctcgatgcgc ggcgttttag tcatgactgg tcggatggtc aacccccggc
      781 caaccatgcc gagacgattg catggctggt gcaatggttc ggtgagcaat tggcaggcac
      841 cacggttgtg gccgtgggcc atcgggtggt gcatggtggc acttggtttg acagtccggt
      901 ggtggtcacc gagcagatca tggcccagtt gcgtgagctc gaaccgctgg cacctcttca
      961 ccaaccacat aacttggccg gtattgaggc ggctcaagca gcgtttgctg atgcgattca
     1021 tgtggcgtgt tttgatacgg cgtttcactg ccatcaaccg ttcgtcaaag actgcttcgc
     1081 attaccaaga cgctactacg agcagggtgt acgccgctac gggtttcatg gcctttctta
     1141 cgagtacatc gcccatcatt tggaaaccca attcccgttg caggccgtgg gtcgtgtcgt
     1201 ggtagcgcat ttgggtaacg gggcgtcgat gtgtgccatg ctcaacggcc actcggttgc
     1261 atcgaccatg gggttttctg cgttagacgg cttgcccatg ggcacacgct gcgggcaact
     1321 cgatcctggt gtcttgttgt atctgctgca gcaaggcatg actgaaccag agctgtctga
     1381 tcttttgtac aaagagtcgg gcttaaaggg tatctcgggc atttcaaatg acatgcgcga
     1441 gctcgaaagt tcggatgcct tagaagccaa gcaggcgatt gactattttg tctatcgcat
     1501 taaacgcgag ctcggtgctt taaccgcggc actcgagggg ctcgatgcag tggtgtttac
     1561 cggtggtatc ggcgagcatt cggcctcggt gcgtgcgcac gttctgcaag gcatgacttg
     1621 gcttggcgtc gagctcgatg aacaggccaa tcgcaaccat gaaaccatca tctcgacacg
     1681 ccgctctagg gtgctttgcc tgcgtgtgcc tacagatgaa gaaaccatga ttgctcagca
     1741 cacgcaaaaa ctgatgggtc aataggttgt ttcggtggct atgaatggtg tgagccaacg
     1801 gtaccggcaa tgtaaagtaa aacgcattga ggcatcggat gctgatgatc cggtgctcgg
     1861 ccagttcctt gcctttctgg ctagcggcat gatgcaacat ccagatcgat tgcaagcgtt
     1921 agatgagggg cttgtccatc gactgcagtc cttggtcggt catgtcgagg tcgatctcga
     1981 ttcagctctc tcggaagacg acgagtgagt ggcgagaagc ctttgcctgt tcgcattcac
     2041 agttggacta tctttgctcg gccggctttc ctgctcagct tgatgcattg gaacagcagg
     2101 tcgaaacgct aaagcaaaaa gacccgatcg ggtatgtgaa aaaaaacgcc acaaagcgac
     2161 tggccgccat cactaaattg gtgtttgatg tcatcccgca agatccgact cggcctgagt
     2221 atcgacaggg tggaacgctt ggtgaagatc gcaagcactg gtttcgggcc aaatttttcc
     2281 agcagtatcg actcttcttt cgctaccatg ctcaggctaa ggtaattgtc tacgcttggg
     2341 ttaacgatga gagtaccaaa cgagcctacg agaatagcaa cgatgcctac agggtgtttc
     2401 gcaggctatt ggaaagtgga aatccgcctg atggctggga ccaacttttg gctcaggcgc
     2461 aatcagagtc tcaccgcatg caagaacgat cggtcaggtc agcagtagcg cagtcttaac
     2521 gcaactgact agtcaaagtc cgtggtcaga caggctaccc tagcgcaaca cttagttgtg
     2581 cgtgaactcg gccaaggc
//
LOCUS       DATBNL010000452         3285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_144968, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000452 DATBNL010000000
VERSION     DATBNL010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144968"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..592)
                     /locus_tag="VIC30_07875"
     CDS             complement(218..592)
                     /locus_tag="VIC30_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HEY7804332.1"
                     /translation="MPILTIKIPSGHSPAQKSDLLKGLTQAVVDSLAAPLSSIRVTID
                     EANAAHCIVAGEIGQPNALVHAALIAGRTEEQKAALIAEIAKAVEQAIGLSTQHTRVL
                     IDDYPTTDMGVAGGISAKAAGR"
     gene            789..1181
                     /locus_tag="VIC30_07880"
     CDS             789..1181
                     /locus_tag="VIC30_07880"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEY7804333.1"
                     /translation="MPDHPSPYKSKGGARRIISAIGYSYKGLKAAVRYEAAFRQELAL
                     AIFLTPCAIFLGRNTGEIILLIGVVLLVLVVELLNSAIEALADAISLDSHPLLGRAKD
                     LGSAAVFVAFAAAFLVWASLIVLRITHG"
     gene            1178..2017
                     /gene="pyrF"
                     /locus_tag="VIC30_07885"
     CDS             1178..2017
                     /gene="pyrF"
                     /locus_tag="VIC30_07885"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009454796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEY7804334.1"
                     /translation="MTFSDKLNHAWHSQQSLLMVGLDPDIERLPTPLHTKINTDIGRE
                     DALWQFCKGIVDATAPYVCGFKPQIAYFASLGAEQTLQRVCLYIKERYPELVLMLDAK
                     RGDIGSTAEHYAREAFDRYEADAVTINPYMGMDSAEPYLQRTDKGVIVLCRTSNPGGS
                     DIQALNVEGEPLYLHVASMVAQRWNANGQCGLVVGATFPDELRKVRARVGDKVPLLVP
                     GIGAQGGDIQATCQAGCNSQGTGMMINSSRAILYASAGEHWQTKAAEAACQTRDAINT
                     ARD"
     gene            complement(2020..2544)
                     /locus_tag="VIC30_07890"
     CDS             complement(2020..2544)
                     /locus_tag="VIC30_07890"
                     /inference="COORDINATES: protein motif:HMM:NF014517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidohydrolase family
                     protein"
                     /protein_id="HEY7804335.1"
                     /translation="MQVDELGQHPDAQALGEYLTQHSGWVVTAESCTGGLIGGALTSV
                     VGSSGWFDRGWITYTNRAKQEQLGVAEQTIKDFGAVSEPVARQMAAGALAMSPTATLA
                     MAVTGIAGPGGGSVTKPVGLVWFGFAKRTQEDVVVSSVHQVFEGNRQAVRQATVEFAL
                     RQALVWLSDTQSPD"
     gene            complement(2556..3086)
                     /locus_tag="VIC30_07895"
     CDS             complement(2556..3086)
                     /locus_tag="VIC30_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEY7804336.1"
                     /translation="MSGSNPTSQRHRVQWPTVGWVFGRPHRALAFGFGSGLIRPGSGT
                     WGSVAALLAWWPLAAAVPWGWLGLLLLLASLAGIWICGRTTEELDVPDHVGVVFDEIV
                     AVWIVLWALPNVLWVLLLGFVLFRVFDISKPWPIRQLDEQVSGGLGVMLDDWVAAGYA
                     VACGWAAWGLYGSMVN"
     gene            complement(3083..>3285)
                     /locus_tag="VIC30_07900"
     CDS             complement(3083..>3285)
                     /locus_tag="VIC30_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012353855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEY7804337.1"
                     /translation="GDVYELCFTASPQKRLVIEQIGQVLALPLTRVGTIRVQSGLLGH
                     QGDGGYIEISGRGFDHFSGGQP"
BASE COUNT          785 a          985 c          808 g          707 t
ORIGIN      
        1 ttgaggatca acaccttgat gtccttgttt tgttcaatac gcgcaaacgc atcgagcaaa
       61 gcctcggtca accctgtacc cgtcaaggcg tttcgggttg gctcgtgatt cagtatcagc
      121 gtcatgacac catggtcgtc aacggactca agcaatacgg gttcggtcat tggttatcct
      181 tggaaagaag atgcaaacat tgcaaacaat tcagaaatta acgcccagcg gccttggccg
      241 atatgccgcc tgcgaccccc atgtcggtgg tggggtagtc atcaattagc acgcgcgtgt
      301 gttgtgtcga caaaccgatc gcttgctcga ccgccttggc gatttcagca atcagtgcgg
      361 ccttctgctc ttcggtgcgt ccggcaatca acgccgcatg aaccagcgca ttaggctggc
      421 cgatttcacc ggccacgatg cagtgcgcag cattcgcctc atcaatcgtg acccgaattg
      481 aagacagggg tgcagccagg ctatcaacaa cggcttgcgt caaacctttc aacaagtccg
      541 atttttgtgc ggggctgtga ccacttggga tttttattgt cagaatgggc atgtagacct
      601 cgtttgtctt ttggcagtgg taggattggc agcgatacga attcgtgcag tagactttag
      661 ttgcgccacc acgcagtgaa ttacgcaaac gccaattggt gttcagcgtg taagaaggct
      721 accaaatttc ctcaccgtcg aacgtcaagg cgaggattta tccatcaccc attcgcgacc
      781 aacaaaccgt gcctgatcat ccttctccct acaaaagcaa aggtggcgct agacgaatta
      841 tctcggccat tggctattcg tataaaggtc tcaaagccgc cgtgcgctat gaggcagcgt
      901 ttcgccaaga acttgcgcta gctatatttt taacgccctg cgccattttt ctgggccgca
      961 acacaggtga aatcatcttg ctcattggcg tggttctgct tgtactagtc gtagaattgc
     1021 tcaattcggc cattgaggcg ttagctgacg ctatttcgct ggactcccac cccttgcttg
     1081 ggcgcgctaa agacttgggc agtgctgccg tgtttgtggc gtttgcagcg gcgtttttgg
     1141 tttgggcaag tttgattgtt ttaaggatta cccacggatg actttttctg acaagcttaa
     1201 tcacgcttgg cactcgcagc aatctttact aatggtgggt cttgaccctg acatcgagcg
     1261 cttacccacc ccactgcata ctaagattaa tactgacatt ggtcgcgaag atgccctctg
     1321 gcaattttgc aaaggcattg tcgatgccac agcaccctac gtctgcggct ttaagccaca
     1381 aattgcctac tttgcctcgc ttggtgctga acaaacccta caaagggttt gtctctacat
     1441 caaagaacgc taccccgaac tggtcctgat gctcgacgct aaacgtggtg atattggcag
     1501 taccgctgag cactacgcgc gtgaggcttt cgatcgctac gaggccgatg ccgtaaccat
     1561 caacccctac atgggcatgg actcagccga gccctatctg caaagaactg acaaaggcgt
     1621 cattgtgctt tgccgcacat ccaaccctgg cggctctgac attcaggccc tgaacgttga
     1681 aggtgaaccc ttatatctgc acgtggcaag tatggtcgcg caacgctgga acgcaaacgg
     1741 tcaatgcggc ctggtggttg gcgccacgtt ccctgatgag ttgcgcaagg tgcgcgcacg
     1801 tgttggcgat aaagtgccac tattagtgcc aggcattggc gctcagggtg gtgatattca
     1861 agcaacctgc caagccgggt gtaacagcca gggcactggc atgatgatta attcatctag
     1921 agccattctt tatgccagcg caggcgagca ttggcagacc aaagccgccg aggcagcttg
     1981 tcaaacccgc gatgccatca acacagccag agactaagcc tagtcgggtg actgcgtatc
     2041 ggacaaccat acaagcgcct ggcgtaaggc aaactctact gtggcctgcc gcacagcttg
     2101 gcggttgcct tcaaacacct gatgaacgga gctgaccacc acgtcttctt gcgtgcgctt
     2161 agcaaaaccg aaccaaacga gcccaactgg cttggtcact gaaccgccac ctggcccggc
     2221 aatgccagtc actgccatgg ccagtgtcgc cgtaggcgac atggccagtg cacctgcagc
     2281 catctgccgg gccaccggct cactgaccgc tccgaagtct ttgatggtct gttcagccac
     2341 acctagctgc tcttgtttgg ctcgattggt gtaagtaatc cagccgcggt caaaccagcc
     2401 gctgctaccc accaccgacg tcagtgcccc accaattaag ccacccgtac acgactcagc
     2461 ggtcacgacc cagcccgaat gctgtgtcag gtactcaccc aaggcctggg catccgggtg
     2521 ttgacccaat tcatccactt gcatgacacg cccctttaat taaccatcga cccatacaac
     2581 ccccacgctg cccaaccaca agccacggca taaccggcag ccacccagtc atcgagcatg
     2641 acgcctaacc caccactgac ctgctcatcg agttgacgaa tcggccaggg tttactgata
     2701 tcaaatacac ggaacaacac aaaacccaac aataaaaccc acaacacatt gggtaacgcc
     2761 cacagcacga tccaaacggc cacgatctca tcgaacacca cgccgacgtg gtcgggcaca
     2821 tcaagctctt cggtggtgcg cccacaaatc cagataccgg ccaatgacgc aagcaacagc
     2881 aacagcccca gccagcccca cggcaccgcc gcggccaaag gccaccatgc caacaatgca
     2941 gccacgctac cccaggtacc agaaccaggt cggatcaagc cactaccaaa cccgaatgcc
     3001 aaagcacggt gtggacgacc aaacacccaa cccaccgtcg gccattgcac gcggtggcgt
     3061 tgactcgttg gattggaacc actcatggtt gccccccaga gaaatgatca aaaccacggc
     3121 ctgagatctc gatatagccg ccgtcgcctt ggtgacccag caaacctgac tggacccgaa
     3181 tcgttccgac tcgggtcaag ggtagcgcaa gtacttgtcc aatttgctca atgaccaaac
     3241 gcttctgtgg agatgcggtg aaacacaact cgtagacatc cccgc
//
LOCUS       DATBNL010000453         1598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174453, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000453 DATBNL010000000
VERSION     DATBNL010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174453"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VIC30_07905"
     CDS             <1..1172
                     /locus_tag="VIC30_07905"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEY7804338.1"
                     /translation="SGVSHVERTSPFVMWANRVCTALNRQREPVVVAPAMLDADDVPQ
                     WSESLPARALWLPIELPAAAKGTRAGLLLARDEAWTPGETAVLVEWTEVWTQSWQLHY
                     APSLRKRAARGWGWLTHMTLLKKVIYSVLLLAFLLFPVRLTILAPGELVPADPSAIRV
                     PIEGVVEEFFVVPNERVQAGQPLLALDLTALTSKLQLARQEMQIATAEYRQSSLQSLR
                     DPKSRSLLTPQEGRALELELEAQYLEQLLEKAQVKSPRDGVVIFDDPLEWIGRPVVAG
                     EKVMVVASERDMEIEVWVPLNEAITLEPDSPVTLYLNTAPFAPVRGELRYLGHEAVAR
                     PDGSYAYRMRARISDLGSAARIGLRGTAKVSGDYVTFSYWVLRKPIVALRQFLGI"
     gene            1175..>1598
                     /locus_tag="VIC30_07910"
     CDS             1175..>1598
                     /locus_tag="VIC30_07910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HylD"
                     /protein_id="HEY7804339.1"
                     /translation="MAAVLPPVMPAAAPKSEPWVKLREDLTLPRGPSDVHGAPTWTLH
                     DPARNQYFSIDWLAFEVLARLSMGNSAAVARAISQDTVLDVDEDEVKAVLQFLADNEL
                     TERHDGEGVQFFVERRAQRHKSMSQHLVHSYLFFRVPIL"
BASE COUNT          296 a          409 c          520 g          373 t
ORIGIN      
        1 agtcgggggt ctcgcacgtt gagcgcacgt cgccctttgt gatgtgggcc aaccgggttt
       61 gcacggcgtt aaaccgtcag cgtgagccag tggtcgtggc gcccgccatg ctggatgctg
      121 acgatgtgcc gcaatggagt gagtcgttgc ctgcgcgtgc gctgtggttg cctattgaac
      181 taccagctgc tgccaaaggc acgcgcgcgg gtctgttgtt ggcgcgtgat gaagcatgga
      241 cgccgggcga gacggcggtg ctggtcgagt ggactgaggt ctggacccaa tcctggcagt
      301 tgcactacgc gccatcgctg cgcaaacgcg cggcgcgcgg ctggggttgg ttgactcata
      361 tgactctcct caaaaaagtc atctacagcg tgttgttgct ggcgtttctg ttgtttccgg
      421 tacgactcac cattttggcg ccaggtgagt tggtgccggc agatccctca gcgatacggg
      481 tgccaattga aggtgtggtt gaagaattct tcgtggtgcc aaacgagcgt gttcaagccg
      541 gacagccgct cttggcgcta gatctcacgg cattaaccag caagttgcag ctagctcgcc
      601 aggagatgca gattgcaacg gctgagtatc ggcaaagctc tctgcagtca ttgcgtgacc
      661 ctaagagccg atcgttgctc acgccccaag agggccgtgc gcttgagtta gagctcgagg
      721 cgcaatatct tgagcagtta ctagaaaagg cacaagtgaa gtcacctcgc gatggggtgg
      781 tgatatttga cgatccactg gagtggattg ggcgtccggt ggtggctggc gagaaggtca
      841 tggtggtggc ctctgagagg gacatggaga ttgaggtctg ggtgccttta aatgaggcca
      901 ttacgcttga gccagattcg ccagtgacgc tgtatttgaa caccgcaccg tttgcgccgg
      961 tgcgcggtga gctgcgttac ttgggacacg aagcggtggc aagacccgat ggcagttacg
     1021 cttaccgtat gcgtgcccgg atttctgatt taggcagtgc ggcgcgcatt gggctgcgtg
     1081 gcacggccaa agtctctggc gactacgtca cgttctctta ctgggtgttg cgcaaaccca
     1141 tcgtggcctt gcgccagttt ctgggtatct agccatggca gcggtgttgc cacccgtcat
     1201 gcctgctgct gcaccgaagt ctgagccctg ggtcaagctt cgtgaagact tgacgttgcc
     1261 ccgcggacca tcggatgtac atggcgcgcc gacttggaca ttgcacgatc ctgcacgcaa
     1321 tcagtatttc tcgatcgatt ggctggcctt tgaagtgctc gcacggttgt ccatgggcaa
     1381 tagcgcggcg gtggcccgag cgattagcca agacacggtg cttgatgttg acgaagatga
     1441 ggtcaaggcg gtgttgcagt ttctggccga caacgagttg actgagcgcc atgacggcga
     1501 gggtgtgcag ttttttgtgg agcgtcgtgc ccagcgccac aaaagcatgt cgcaacacct
     1561 ggtgcacagt tatttgttct ttagggtccc aatcttgc
//
LOCUS       DATBNL010000454         5004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_154992, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000454 DATBNL010000000
VERSION     DATBNL010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154992"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VIC30_07915"
     CDS             <1..751
                     /locus_tag="VIC30_07915"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7804340.1"
                     /translation="VMTSLGHEPSKQIITMSGFVQHGPDGVMLVRDLPAAKLSDYAMV
                     QDHDTIYLLPMSEATLTPAGGPGCFDGQASWPRAVVNQSVIGAAPRGLLAQGLAVALA
                     AQMAGAADRALAMTLDHANQRTQFGKPIGKFQAVQQQLAQMAEWVFSARMASQIGAQS
                     EDWQVLLLPAAVAKTQVSAVAVSIAHVAHAVHAAIGITAEYDLQLYTRRLYEWARLGG
                     GEPYWAAQIGQQALSRAHMLDFMRQGVFQEV"
     gene            complement(739..1470)
                     /gene="fnr"
                     /locus_tag="VIC30_07920"
     CDS             complement(739..1470)
                     /gene="fnr"
                     /locus_tag="VIC30_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013394848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEY7804341.1"
                     /translation="MSQKRMPVAVEAVHCATCMMGNVCLPAGMPNHEVEQLDELVKER
                     IKLKKGDVLYRHGEKLDALFGLRLGSVKTQLEDAAGQVQITGFFLPGEIIGLDGMLDG
                     EHGTNAVAMEDSEVCVVRIRDIDDISRYVPSLQQQVRRVMSKEIARTYQVMLALGSMR
                     SEARLAAFLTNLSQRLSALGYSSTDFIMRMSREEIGNYLGLTLETVSRLFSRFARDGL
                     IRVSQREIRILDMNALEELAGHQTS"
     gene            complement(1562..2464)
                     /locus_tag="VIC30_07925"
     CDS             complement(1562..2464)
                     /locus_tag="VIC30_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018417614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7804342.1"
                     /translation="MDRFSQLEAFVTTASLGSFSAAAREQGVTPALIARRVDALEARL
                     GVRLLVRSTRRLALTSEGHALLEQAQDILDRLQDAETRIGQGSAKPVGLLRISAPAGF
                     GRRHVAPLLPTLCQQHPGLTVALDLSDDFVDLANERYDCAIRIGELSDSSLIGTRLAD
                     NQRVVVASPQYLRQHGQPKHPHDLKNYHCLSLSAHSGQRRGWLFEIDGQPVWQPIEGA
                     LACSDGSVLHQWCLEGQGLAWRSLWEVSQDIASGRLETVLDDYRSPPTGIFALTPQRR
                     LTPLRVKVFIDWLKYHYRQNGFFD"
     gene            2645..>5004
                     /gene="clpB"
                     /locus_tag="VIC30_07930"
     CDS             2645..>5004
                     /gene="clpB"
                     /locus_tag="VIC30_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEY7804343.1"
                     /translation="MRFDKLTTKFQQALADAQSMAARNDNQFIEPVHLLAAMLADPDS
                     GVGSLLARAGVAVNRLGPALEREISALPQVQGGDGNVTVSRELQGVLTRTDKEAGKRG
                     DAYIPTELFLLALADDKGPAGRVLAEAGLQRKPLEAAIDAVRGGSAVTDQEGESKREA
                     LAKYTTDLTERAREGKLDPVIGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNDEVPETLRGKKVLSLDLASLLAGAKFRGEFEERLKAVLKELSQDDGSNIVF
                     IDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQ
                     KVLVDEPNVESTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAID
                     LIDEAASRIRMEIDSKPEVMDRLERRIIQLKIEREAIKKESDEASKRRLQNLEEELES
                     LQREYNDFEEVWKSEKAAVQGTQAIKEEIDRARAEMAELQRKGQFDKLAEWQYGKLPE
                     LESRLQVAEGKAQDADEKPKLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKLLLME
                     DRLHERVVGQDEAVSLVADAIRRSRAGLSDPARPYGSFLFLGPTGVGKTELTRALASF
                     LFDSDEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEV
                     EKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQAMSGQSYEAVK
                     EVVWEEVKNHFRPEFLNRIDEVVVFHALQSDQLQAIAEIQIERLAER"
BASE COUNT         1116 a         1269 c         1509 g         1110 t
ORIGIN      
        1 tgtcatgaca agcttgggtc atgagccatc aaagcaaatc atcacgatga gcggctttgt
       61 gcagcacggg cctgatggtg tgatgttggt gcgtgacttg cctgcggcaa agctgtcgga
      121 ttacgcgatg gtccaggatc atgacacgat ttatctgttg ccgatgtctg aggccacatt
      181 aacacccgct ggtgggcccg ggtgtttcga tggtcaagcg agttggccac gcgcagtggt
      241 gaatcaatcg gtgattggtg cggcccctcg cgggttgtta gcgcagggct tggctgtggc
      301 gctagccgct caaatggcag gtgctgccga cagggcactt gcgatgacgt tagatcacgc
      361 caatcaaaga acgcagtttg gcaagccgat cggcaagttt caagctgtgc agcaacagtt
      421 ggcgcaaatg gccgaatggg tgtttagcgc tcgaatggcc agccagattg gtgcgcaaag
      481 cgaggattgg caagtgctat tgctgcccgc ggccgtcgca aaaacccagg tcagtgcggt
      541 ggcagtgtcg attgcgcatg ttgcccatgc ggtccacgca gccattggca tcacagctga
      601 atatgatttg cagctatata cccggcgctt atatgagtgg gcaagactag gaggtggcga
      661 gccttactgg gctgcacaaa tcgggcagca ggcactgtca cgtgcccaca tgctcgactt
      721 tatgcgtcaa ggcgtgtttc aggaagtttg atggcctgcg agttcctcga gcgcattcat
      781 gtcgaggatt cggatttcgc gttgactcac gcgaatcagg ccatcacgcg cgaagcgcga
      841 gaacaggcga ctgacggtct caagcgttaa cccaagatag ttgccgattt cttcgcggct
      901 catgcgcatg atgaagtcag ttgaggagta acccaaagcc gacaagcgtt gcgacaggtt
      961 tgtcagaaag gcagctagac gggcttcgga gcgcatcgaa ccgagcgcga gcatgacctg
     1021 ataggtgcgg gcaatttctt tactcatcac gcgtcgcact tgctgctgca aagagggaac
     1081 atagcgactg atgtcgtcga tgtctctgat gcgcaccaca cagacttcag agtcttccat
     1141 ggccacggca ttggtgccat gctcaccgtc gagcatgcca tccaagccaa tgatttcgcc
     1201 tggcaagaaa aagcccgtga tctgcacttg accggcggca tcttcgagct gggttttaac
     1261 tgaaccgagt ctgaggccaa acaaggcatc gagtttctcg ccgtgccgat acagcacatc
     1321 gcctttttta agcttgatgc gctctttgac caactcatcg agttgctcga cttcatggtt
     1381 tggcataccg gcaggcaggc aaacgttgcc catcatacag gtggcgcaat gaacggcttc
     1441 aacagcgact ggcattcgtt tctgtgacat agctttggac ccatcgaact ggtttaggtc
     1501 gccgaactat tcggcttcgt gtttattgtg gcaagtatca tctgaaccca cagaattgat
     1561 tttagtcaaa aaaaccattt tgtcgatagt gatatttcag ccaatcaata aaaaccttta
     1621 cccgtagtgg tgtcagtcta cgctgtggcg ttagcgcaaa aatacccgtg ggcggtgatc
     1681 gatagtcatc caggacggtc tcgagtcgac cgctagcgat gtcttggctg acttcccaca
     1741 agctgcgcca ggccagccct tggccctcta ggcaccactg atgcagcaca ctgccgtcgc
     1801 tacaggcaag cgcgccttcg atgggttgcc agaccggctg tccgtcgatt tcaaataacc
     1861 agccacggcg ttgtccgcta tgggcagaca aggacaggca gtggtagttt ttaaggtcgt
     1921 gcgggtgttt gggttgccca tgttggcgta aatactgtgg tgaagccacc acaacccgtt
     1981 gattgtcggc tagtcgggtg ccaattaggc ttgagtcaga gagctcacca atacgaatcg
     2041 cgcagtcata gcgctcattg gccaaatcca caaaatcgtc gcttaaatcc agcgccactg
     2101 tcagtccggg atgttgttgg cacaaggtgg gcaagagcgg cgcgacatgg cgtcgaccga
     2161 atccggccgg cgcactgatg cgcagcagcc ccacaggctt ggcactgcct tgaccgatgc
     2221 gtgtttcagc atcttgcaat cgatcaagaa tgtcttgggc ttgttcaagc aacgcatgac
     2281 cctcgctcgt gagggccaag cgtctggtgc tgcgcaccag cagacgtacg cccagacgcg
     2341 cttctagcgc gtccacgcgt cgggcgatga gcgcgggtgt cacgccttgt tcgcgcgcag
     2401 ctgccgagaa gctgcccaag cttgcggttg tgacaaatgc ctctagttgc gagaatcgat
     2461 ccatgttgag atcttagtgc agacggggga gggtggtggc gtgatccgga ctttgttgtt
     2521 gtagtttgtg ggtctttgcg cagctttgtc gttgccacgg ctattgaaat cgtgcttaat
     2581 aaccccacat gataactaag gacatttagc gcgggcacgt gctcgctacg gacgggacac
     2641 catcatgaga tttgacaaac taaccaccaa gtttcagcaa gcgcttgccg atgcgcaaag
     2701 catggctgcg cgcaacgaca atcagtttat tgagccagtg catctgttgg cagccatgct
     2761 tgcagaccca gacagtggtg tgggcagcct gctggcgcgt gccggtgtgg ccgtgaatcg
     2821 gcttggcccg gcacttgagc gcgagatcag tgctttgcct caagtccaag gcggggatgg
     2881 caacgtcacg gtcagccgcg aattacaggg tgttttaacg cgcaccgaca aagaggcggg
     2941 taagcgcggt gatgcttaca ttccaacgga attatttcta ttggcgttgg ctgatgacaa
     3001 agggcccgct ggccgggtct tggctgaagc gggtttacaa cgcaaaccgc tagaagccgc
     3061 cattgatgcg gtgcgtggcg gcagcgcggt cacagaccaa gaaggtgagt ccaagcgcga
     3121 ggctttggcc aagtacacca ctgacctgac cgagcgcgcc cgcgagggca agcttgatcc
     3181 tgtgattggc cgagacgatg aaattcgtcg gtccattcaa atcctgcagc gccgcactaa
     3241 aaataacccg gtgctcattg gtgagcccgg tgtcggtaaa accgccattg ttgagggttt
     3301 ggcccagcgc attgtcaatg acgaagtgcc agagaccctg cgcggtaaaa aagtcttgtc
     3361 gcttgatttg gctagtcttt tagcgggtgc caagtttcgt ggtgagtttg aagagcgtct
     3421 gaaagccgta ctcaaagaac tctcccaaga cgatggcagc aatattgtct ttattgacga
     3481 gatccacacc atggttggcg ctggcaaggc cgaaggcgcc atggatgctg gcaacatgct
     3541 taagcctgcg ctcgcgcgcg gtgagttgca ttgcattggt gcaaccaccc tggacgaata
     3601 ccgcaagtac attgagaaag acgccgcgct tgagcgtcgg tttcagaagg tcttggtcga
     3661 tgagcccaat gtggagtcaa cgattgcgat tctgcgtggt ctgcaagaga agtacgaggt
     3721 gcaccacggc gttgacatca ctgacccagc gattgtggcg gctgctgagt tgtcgcaccg
     3781 ctacatcacg gatcgcttct tgccggacaa ggccattgac ctgattgacg aggcggcttc
     3841 gcgcattcgc atggaaattg actccaagcc tgaagtgatg gaccggcttg agcgacgcat
     3901 catccagtta aagattgaac gcgaggccat taaaaaagag tccgacgagg cctctaagcg
     3961 tcgcctacaa aaccttgaag aagagctcga gagcttgcag cgcgaataca acgacttcga
     4021 agaagtgtgg aagtcagaga aagcggcggt gcaaggtact caggccatca aggaagagat
     4081 tgaccgggcg cgtgctgaaa tggctgagct gcagcgcaaa gggcagttcg acaaactcgc
     4141 cgaatggcaa tacggcaagt tgcctgagct tgagtcccgt ctgcaggtag ccgagggcaa
     4201 ggcgcaggac gctgatgaga agcccaagtt gttgcgcacc caagtgggtg ccgaggaaat
     4261 cgctgaagtg gtgtctcggg caactggtat tcctgtgtcc aagatgatgc aaggcgagcg
     4321 cgagaagttg ttgctcatgg aagaccgctt gcacgagcgt gtggttggtc aagatgaggc
     4381 ggtcagtctc gtagctgacg cgattcgtcg ctccagagcc ggtttgtctg atcctgcgcg
     4441 tccttatggc tcgttcttat ttcttggtcc cacgggcgtg ggcaagacgg agttaacgcg
     4501 tgccttggcc agcttcttgt ttgactctga tgagcaccta gtgcgtatcg acatgagcga
     4561 gttcatggaa aagcattcgg tggcacgctt gattggtgcg ccacccggct acgtgggcta
     4621 cgaagaaggt ggctacctga ccgaagcagt acggcgcaag ccctacagtg tggtgctgct
     4681 cgatgaggtg gagaaggccc acccggatgt gttcaatgtg ctgcttcaag tgcttgacga
     4741 tggccgtctg accgatggtc aagggcgcac ggtggacttc cgaaataccg tgattgtgat
     4801 gacgtccaat ttgggttcgc aacacattca ggccatgtcg ggtcagtcct atgaggcggt
     4861 caaagaggtg gtgtgggaag aagtcaaaaa ccacttcagg ccggagttct tgaaccggat
     4921 tgatgaggta gtggtgtttc atgcgctgca aagcgatcag ctgcaagcga ttgctgagat
     4981 tcagatcgaa cgattggccg agcg
//
LOCUS       DATBNL010000455         4468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_45136, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000455 DATBNL010000000
VERSION     DATBNL010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4468
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45136"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..1572
                     /locus_tag="VIC30_07935"
                     /pseudo
     CDS             181..1572
                     /locus_tag="VIC30_07935"
                     /inference="COORDINATES: protein motif:HMM:NF042682.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
     gene            1936..3771
                     /locus_tag="VIC30_07940"
     CDS             1936..3771
                     /locus_tag="VIC30_07940"
                     /inference="COORDINATES: protein motif:HMM:NF019315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7TM-DISM domain-containing protein"
                     /protein_id="HEY7804344.1"
                     /translation="MRNWFGGFLFLWWMTWAGVAQAGILQAQVLEDPGADLSFSQVIQ
                     GEFPGSFEPMGDTLARGYTSSAFWVKLVVAAHEQRLYLRVRPPYLDHVTLYRPDPVQP
                     SGWAVLQNGDRVAMKDRRVWGVSLLFVLPPSDNDQTLYLRLQTQSSSLMNFDVLTLPE
                     FQQQEFHTMLLQLLLVAVMFGILIWAALDYVVNRQRIVGVFLLVQVAQMGYVLAVGGY
                     LPLMFTNASMADAMTSVLVGLTVMITLLFHRMLVAEFEPSKSALWVLNLMIAATFFAF
                     VAVLFGQLQIGLPLNSYMVLLLMPVLLWLAFSATRERLPGLLALRLAYVALACVLFFV
                     MAPIFGIWVSFDVYVWTTTTQGLLTGLIMAAFLFRRSMATQAQFVQDQLQLARVQEKL
                     ASEQQRVADQRQFLDMLAHELKTPLGVIQLTLDAVQLPMVQQQRLHRSLDTMSAVIDR
                     CRLSLQLDEGRLEPKLESIDISAAVHDVVLTCKDPDRVVFAGDGLGLAQTDRQLFLVI
                     LHNLLDNAVKYSPAGSVITVSTRACEERGSSGICVTVENRFTRRPAATSETLFEKYFR
                     GINAMGQTGSGLGLHLSRRLTTIINGHLWAELGSDDIKLCLWIPN"
     gene            3756..4451
                     /locus_tag="VIC30_07945"
     CDS             3756..4451
                     /locus_tag="VIC30_07945"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7804345.1"
                     /translation="MDTQLTIAVVEDHDDLREAMVEALVNQGHQVVALCDAEQFAVAA
                     AGHSFDLVIVDLNLPGEDGMSLTKRLRQQDPKLGLVIVSARGLVQEKTQGYESGADIY
                     LTKPVALQELVAAVQSLGQRIRAPEAKANVRANLNFAQLELTGTDGTTVVLSWHEAVL
                     LRALIVSKERQLDSWQLMEAMGKNTQAYSKSALELVVLRLRKRMQSVGFEANVITAVR
                     NKGYMLLGEVDVT"
BASE COUNT          975 a         1085 c         1306 g         1102 t
ORIGIN      
        1 tcagcctgca acaaagacct gcgttgtgtt gatgggttct gcccaagctt tgtgacggtt
       61 tctggtgctg aacttaaaaa aaccagtgcc actaaggcaa cgaccgaacg caaccaaatc
      121 aacctgcctg agccacagtt gttggagtct gaccgcgtat ccaatcgcgt acacgagaca
      181 gtgatcaccg gtattggcgg caccggtgtc atcaccatcg gtgcgattgt ggccatggca
      241 gctcggcttg aaggcaagcg tgctacttgt ctagatcaaa cgggcatctc ccagaaaaac
      301 ggtgcggtgc tctcgcatgt gcgtatagga ccagatgctg acagcctgca cgccccacgc
      361 gtgtcgacag gcaatgccga tctcgttttg ggttgcgaca tgatggtggc agccagcgtg
      421 ccggcggttt caaccatggc aactgagcgc accaaggtgg tactgaacac acatttggcg
      481 ccgcatgcgg attttgtgtt gaatccggtg accgcggatt ttggggaaga gtcactaaag
      541 gcggcgatca cccaagccgc cggcgagaac gcggtggcaa tgttgccggc cacgcgactg
      601 gccactaccg tgtttggcga tgccatcgcc agcaatatga ttgtgctggg ttacgcccta
      661 caaaagggct ggatcccagt gtcgattgcg gctattgaac gtgccattga attgaacggt
      721 gtagcgatca aagccaatct cactgccctg gaacttggtc gtgaagccgc tgagaatctt
      781 gagcaagtct taaaggatgt gaccccggca cagacggtga agatgctgtc tcggcccaag
      841 gagacgcttg acgagatgat cgagcgctgc gtgcaggaac tcacggccta ccagaacaag
      901 gcctatgcgg agcagtattt gcaattggtt cagcgggtac ggactgcaga aaccggtctc
      961 ggcgcgcaat ctgagcgact gagtcgtaaa gtggctgagc aggcttatcg ggccatggct
     1021 tacaaggatg agtacgaggt cgccagactc tacaccgatg gacggtttgt cgagaaactt
     1081 agaacttagt ttgaggggga tgccaaactc acctttcacc tcgcaccacc actgttggct
     1141 aagcgggatc ccatcaccgg tcatcttaaa aagaaaccgt acggcgcttg gatcgttagt
     1201 gcattcaagg tcttggccaa gttcaaagcc ttacgcggct cagcgctcga tccgtttggt
     1261 tacaaccccg aacgtaaggt cgagcgagcg ctcgctcgag cctacccaca gatcatggca
     1321 acggttgcag ctgacttaaa cgcagacaac ttgccatggg ccattgaagt ggccagtgcg
     1381 tttggcaaaa tccgagggtt tggacatgtg aaagagcgta atttggataa ggcgttgact
     1441 gagcttgacc gattggccaa aggcacagcc atcgagctgg cagtcacgaa actagcgggg
     1501 cagttggcta gccatctcaa agctgcgggt cctagcaaag cggcagccaa gttgtctgaa
     1561 cagcaagcgt gaggttgatt gaacagcgta cgacattcga ttggtgagtt ttgaggcaat
     1621 cgtaggcatg gcgcacatcg cgatatacca aaatttgaag atcaagattg aatcgtccgg
     1681 tgacgacaca ccgcaggggt cgcttgatgg ttgagcgtgc gagtcgattg caatcggtgc
     1741 ttggcgttgt tcttgtaggt taactaacca ctacatccta tcagttacat cctgtgacta
     1801 ttccagtatg ctgttgcctt ctcaagtttt tggggtggca agaggcgggt actaggcaga
     1861 cgctggtttg atgctaggtc gacgctgagc cgacactaag tcgacacccg accgacacta
     1921 agcccctctt ttcttatgcg taactggttt ggtgggtttc tgtttctgtg gtggatgact
     1981 tgggccggtg ttgctcaggc gggtatcttg caggcccaag tcctggaaga ccctggcgca
     2041 gacctgagct ttagccaagt gattcagggt gagttcccag ggtcgttcga acccatgggc
     2101 gataccttgg cgcggggtta tacgtcatcg gcattttggg tcaagctcgt ggtcgctgcg
     2161 catgaacagc gtttgtacct tcgggtgcgg ccaccgtacc tcgaccacgt cacgttgtat
     2221 cgccctgatc ctgtgcaacc gtctggctgg gcagtcctac aaaacggtga tcgcgtagcg
     2281 atgaaggatc gccgagtttg gggcgtgtca ctgctgtttg ttctgccacc gagcgataac
     2341 gatcaaacac tgtatttgcg tttgcagacg caaagttcga gcttgatgaa ctttgatgtg
     2401 ttgaccttgc ctgagtttca acagcaagag tttcacacga tgttgttgca gcttttgttg
     2461 gttgctgtca tgtttggcat tctgatttgg gcagcgcttg actacgtggt caaccgtcag
     2521 cggattgtcg gtgtgttctt gttggtgcaa gtcgcacaga tgggctacgt gttagcagtc
     2581 ggtggctacc tccccctgat gtttactaat gcatcaatgg cagatgcaat gacctctgtg
     2641 cttgtcgggc taacggtgat gatcacgttg ctgtttcacc gaatgctggt tgcggagttt
     2701 gagccgagca aatcggcgct atgggtattg aatttgatga ttgcggcaac gttcttcgca
     2761 ttcgttgctg ttctgttcgg gcagttgcaa atcggactgc cactaaacag ttacatggtg
     2821 ttgctgctga tgcccgtgtt gttatggttg gcctttagcg ccacgcgtga gcgtttgccc
     2881 ggactacttg cgctgcggct ggcttatgtc gcgctggcgt gtgtgctgtt ttttgtgatg
     2941 gcgccgatat ttggtatttg ggtcagtttc gatgtctatg tgtggacgac caccacgcag
     3001 ggattgctaa ctggactgat catggcagct tttctgttta ggcgatccat ggccacgcag
     3061 gcccagtttg tgcaggatca actgcagttg gctcgtgtac aagaaaagct ggcctctgag
     3121 cagcaacgtg ttgcagacca gcgccagttt ctggacatgc tggcgcatga gttaaagacg
     3181 ccgcttgggg tcattcaact cacgcttgat gcggtgcaac tgccaatggt ccagcagcaa
     3241 cgcttgcacc gatcgcttga caccatgtcg gcagtgattg atcggtgccg cttatcactg
     3301 caattggatg agggtcggct agagcccaaa ctggaatcga ttgatatctc tgccgccgtg
     3361 catgacgtgg tgttgacttg taaagaccct gaccgggttg tatttgcagg tgatggtcta
     3421 ggcttggctc aaaccgaccg gcaactgttt ttagtgattc ttcataatct gttggacaat
     3481 gctgtgaagt attcacctgc aggttcggtc atcacggtat cgacgcgcgc ttgcgaggag
     3541 cgcggcagtt ccggtatttg tgtcacggtg gaaaaccgtt ttactcggcg tccggcagcc
     3601 acgtcggaga ctttatttga aaagtatttc cgtggcatca atgccatggg ccaaaccggc
     3661 tcgggcctcg gcctgcactt aagtcgacgt ttgacaacca ttatcaacgg tcatctatgg
     3721 gctgaactcg gctctgacga catcaaactg tgcttatgga tacccaatta acgatagcag
     3781 tggttgaaga ccacgatgac ttacgtgagg ccatggttga ggcacttgtc aaccaaggac
     3841 atcaagtcgt ggccttgtgc gacgccgagc agttcgcagt cgcagcagct ggccattcct
     3901 ttgatctggt gattgtggat ctgaacctac caggtgaaga cggtatgtcc ttaaccaagc
     3961 gtctacgcca gcaggatcca aagctgggtt tggtgattgt ttcagccagg ggactcgtcc
     4021 aagaaaaaac ccagggttac gagagtggtg cagacatcta tctgaccaag cccgtggcgt
     4081 tgcaggagct cgtggcggca gtgcagtcac ttggacaacg gattagagcg cctgaggcaa
     4141 aggctaatgt acgcgcgaat ttgaatttcg cgcagcttga gctcactggg acggatggca
     4201 caactgtggt gttgtcctgg cacgaagccg tgctgttgcg ggcattaatc gtgtccaaag
     4261 aacgtcaact cgactcttgg cagttaatgg aagccatggg taaaaatacc caagcgtatt
     4321 ccaagtcagc tttggagctc gtggtgttgc gcttgcgcaa acggatgcaa agcgtggggt
     4381 ttgaagccaa tgtaatcacg gccgtccgta ataaaggcta tatgctcttg ggcgaagtag
     4441 atgtgacttg atgcaaggtc gcatatcg
//
LOCUS       DATBNL010000456         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105140, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000456 DATBNL010000000
VERSION     DATBNL010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105140"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VIC30_07950"
     CDS             <1..324
                     /locus_tag="VIC30_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEY7804346.1"
                     /translation="RFGLSPEKMVDVLNASTGMNNSTQKKFKQYVLSGKYNAGFGLDL
                     MVKDLGIALGLAHETQTPAAFSALCHEMWSASARMLGSGQDHTAVAKLVQTLANDSIE
                     TPETK"
     gene            complement(372..593)
                     /locus_tag="VIC30_07955"
     CDS             complement(372..593)
                     /locus_tag="VIC30_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014005870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HEY7804347.1"
                     /translation="MSDSKTDQTVRPDSPCVAVCSTLFDEICRGCGRSVMEVSNWVFM
                     TPEEKDNVWQRILSEGYPRPPDNRRAPKD"
     gene            complement(903..1253)
                     /locus_tag="VIC30_07960"
     CDS             complement(903..1253)
                     /locus_tag="VIC30_07960"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7804348.1"
                     /translation="MSVVWKVLLADQAELDLLEITIWTAENFGRRQADVYAETITLAI
                     EALHNGPDILGVDEREEIGPDIRTLHVARNGRKGRHFVVFRGAPRQTIEVLRLLHDSM
                     DLAQHVPPDNESQH"
     gene            complement(1250..1531)
                     /locus_tag="VIC30_07965"
     CDS             complement(1250..1531)
                     /locus_tag="VIC30_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEY7804349.1"
                     /translation="MPTRNVVLTDHQATLVEQLVTSGRYQNASEVLREGLRLVERREA
                     EDVYRLEALRSAVQAGIADIEAGRSKTFDSKESLRAHLKLVTGKAIATA"
     gene            complement(1779..2942)
                     /gene="metK"
                     /locus_tag="VIC30_07970"
     CDS             complement(1779..2942)
                     /gene="metK"
                     /locus_tag="VIC30_07970"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006216394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEY7804350.1"
                     /translation="MKANDFLFTSESVSEGHPDKVSDQISDAVLDAIFTQDPNARVAA
                     ETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNSDYGIDYKGCAVLVAYDKQS
                     PDIAQGVDRTSEEFLNQGAGDQGLMFGYACDETPDLMPAPIWYSHRLVQRQSELRKDG
                     RLPWLRPDAKSQVTFRYVDGKPVEVDTVVLSTQHAPEISQSAVHEAVIEDIIRPSFPD
                     GLITPQTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVD
                     RSAAYAARYVAKNIVAAGLATQCQVQVSYAIGVAEPINITIYTEGTGVVSDDQLAKLV
                     REHFDLRPRGIVNMLDLLRPIYSKTAAYGHFGRSEPEFSWEATDKAADLKKAV"
BASE COUNT          718 a          854 c          787 g          704 t
ORIGIN      
        1 cgctttgggc ttagccccga gaaaatggtc gatgtactca acgcgtcgac cggcatgaac
       61 aactccacac agaagaagtt caagcaatac gtgctgtcag gcaaatacaa cgctggcttt
      121 ggacttgacc tcatggtcaa agaccttggc attgcattgg ggctagcgca cgagacgcaa
      181 acaccggcgg ctttctccgc actgtgtcat gagatgtggt cggcctcggc gcgaatgctc
      241 ggcagtggcc aagaccacac cgctgtggca aaactggttc agacgctagc caatgattcg
      301 attgaaacgc cagaaacaaa ataactaagc aaataagcta actaagcaaa cacgcaaccg
      361 agcgatcaag cctagtcttt aggcgccctg cggttgtctg gcggacgagg atagccttcg
      421 gacagaatcc gttgccagac gttgtctttt tcttcaggcg tcataaacac ccagttcgag
      481 acttccatga cgctgcgccc gcacccacga caaatctcat caaacagcgt cgagcagacc
      541 gccacacaag gtgagtcggg gcgcacggtc tgatccgttt ttgagtcact catgggcttg
      601 ccgacctatt gttttatttg aataagaacg cagtgtagcg aggtgcaaac ctgcggacac
      661 aaaaaacccg ccctcgcggg cgggttccac cggcttatca gacgaatccc gggtaaatgt
      721 acaacgaact tgcgacacac ctctgacaaa cctaaacatt aaacttgtac cggcttggct
      781 tttctgggca cggctctgca gcttaggatg cgttcttagc gaattgacca gacgagtggg
      841 cgtttggttg atatccacct atcccatata gccagaagta ttgcgtgccc tctaaccgct
      901 actcagtgtt gcgattcatt gtccggcggc acatgctgag ctagatccat gctgtcatgt
      961 agcaaccgaa gcacctcgat agtctgccgt ggggcacccc tgaacaccac aaagtgccgc
     1021 cctttacgac cattgcgcgc cacatgcagg gtgcggatat cgggtccaat ttcttcccgt
     1081 tcatcaactc ccaggatatc cggcccattg tgcaatgcct caatcgccag tgtgatggtt
     1141 tcagcgtaga catcggcttg gcgtctgccg aagttctcag ctgtccatat cgtgatttcg
     1201 agcagatcaa gttcggcctg atctgccagc agaaccttcc aaaccacact catgcagtgg
     1261 cgatcgcttt gccggtgacc aatttaaggt gagcgcgcag tgactcctta gagtcaaagg
     1321 tcttggatcg acctgcctca atgtctgcga tgcccgcttg cacagcagaa cgaagtgcct
     1381 ccaagcgata gacatcttct gcttctcgtc gctcaacaag tctcagccct tcgcgaagca
     1441 cttcgctggc attttgataa cggccgctcg tgaccaactg ctcaactagg gttgcctgat
     1501 gatcggtgag tacaacattg cgagtgggca tgccagtctc cttttgttga tcatattggc
     1561 agattatgcc aattcaacag cggtgcgtca atctaaaccc ttttgcctga actctttcaa
     1621 gcaactactt atcagcgatc tttggcttgg ggacgcggcg cagcacacgt gtctttggat
     1681 cgcttggata tcactgactt ctacagcaga cacttgttag ccccatttcc gtgtccggac
     1741 aaatagaagc cagttaaccg aagcgttaag ttgatacctt aaaccgcctt tttcaggtcc
     1801 gccgccttgt cagtggcttc ccagctgaat tcaggttcac tgcggccaaa gtgaccgtaa
     1861 gcggcggttt ttgaatagat cgggcgcaac aaatcgagca tgttgacgat gccgcgtggg
     1921 cgtaaatcaa aatgctcgcg cacgagcttg gccaactgat catcagagac cacacccgtg
     1981 ccttcggtgt aaatcgtgat gttgatcggt tcggccacac caatggcgta actcacctgc
     2041 acctggcact gagtggccaa gcctgcagcc acgatatttt tagccacgta gcgggcagca
     2101 taagctgctg aacgatccac tttggacggg tccttacccg agaaagcacc accgccgtgt
     2161 gggcaagcgc cgccgtaggt atccacaatg atcttgcgtc ccgtcaaacc gcaatcgccc
     2221 tgcggtccac caatgacgaa ccggccagtg gggttaacca gaaacttggt ttgcggggta
     2281 atcagaccgt ctgggaagct cggacgaatg atgtcttcga tcaccgcctc gtgcaccgcg
     2341 ctttgcgaaa tctctggggc atgctgtgtc gaaagcacca cggtatcgac ctcgacaggc
     2401 ttgccgtcga cgtaacggaa cgtcacttgt gacttggcat ccgggcgcag ccaaggcaga
     2461 cggccgtctt tacgcaattc gctttggcgt tgcaccagac gatgcgaata ccaaatcggt
     2521 gcgggcatca agtccggcgt ttcatcgcag gcataaccaa acatcagacc ttggtcgccc
     2581 gcgccttggt tgagaaactc ttccgaagtg cgatccacac cctgagcgat gtcgggtgac
     2641 tgcttgtcgt aagcgaccag caccgcgcaa cccttgtagt caataccgta atcactgttg
     2701 tcgtaaccga tgcgcttgat cgtgtcgcgc gccacttgta tgtagtcaac gtttgcagtg
     2761 gtggtgattt caccagcgag cacaaccaga cctgtgttgc aaagtgtctc agcggctacg
     2821 cgggcattgg gatcttgcgt gaagatcgca tcaagcacgg catcggaaat ctgatcagag
     2881 actttgtcag ggtggccctc agaaacagat tccgaggtga agagaaaatc attggctttc
     2941 attgacatat caacatcctt actcaagcta ggcagattta aatgatctgc cggttactgg
     3001 gtgcgctgca cccctgtaac ctctgtcttg agtggcttga gagacaagcc gatgtgacgt
     3061 tgg
//
LOCUS       DATBNL010000457         2154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_145073, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000457 DATBNL010000000
VERSION     DATBNL010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145073"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VIC30_07975"
     CDS             <1..204
                     /locus_tag="VIC30_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804351.1"
                     /translation="ARYFPGLEASYTALANASADRTDRTNQLTRLTNLSGTMNQYARL
                     ANHPLSAKLFAQQCLQTFCDVLK"
     gene            201..995
                     /locus_tag="VIC30_07980"
     CDS             201..995
                     /locus_tag="VIC30_07980"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014111526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEY7804352.1"
                     /translation="MTVFIDSHCHVNFPELAEDYGAIAQRMGENRVKMALCVSVNLPD
                     WDGLIAMVEREPTLWGSVGVHPDYENEIEPTVDDLVSRSHHPKVVAIGETGLDYYRLT
                     GDLEWQRERFRTHIRAAKQAKLPLIIHTRQAQEDTIRILQEEGADEIGGVMHCFTESW
                     EMAQQSMELGFYVSFSGIVTFKNARDLQETASKMPMDRLLIETDSPYLAPVPYRGKRN
                     DPSLVVHVADKIAELQGISAQEVADQSTENFFRLFSKVERQTEVAS"
     gene            1074..1775
                     /locus_tag="VIC30_07985"
     CDS             1074..1775
                     /locus_tag="VIC30_07985"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY7804353.1"
                     /translation="MLEITQIKSSKLLIQKNMWSVFLVLAAIIGLLAQPVNAQSQEDL
                     WIYVTNDRASSVQTLLDRGLDPNTRDPRGNPIIMQAVRDDSWAVFDVVLNHPKTDVRI
                     MNGYQETPLMYVSLVGDLERAKQLVAKGAQINHLGWTPLHYAASTGQVPVVEYLLAQG
                     AMPNAPAPDGSSPITMAAQAGAIDTVQVLLKAGADPSAINTNGVNAAQAARNRGHTDL
                     ADALDEVIVKRRQGQ"
     gene            complement(1794..>2154)
                     /locus_tag="VIC30_07990"
     CDS             complement(1794..>2154)
                     /locus_tag="VIC30_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEY7804354.1"
                     /translation="LFWQMGGLGPMAGQNHHFGNFAPEKVPYAIKRYVDETARLYGVL
                     NKRLEGRQFIAGDYSIADMACFPWIAAFPRQQIDINEFPNVKRWYNDIHQRDATQRAY
                     RLSEQLNPNAPKLPPLA"
BASE COUNT          534 a          549 c          581 g          490 t
ORIGIN      
        1 gcgcgttatt ttccagggct tgaggcttct tacacggcac tggcaaatgc cagtgcggat
       61 cgtacggatc gtacgaacca gctaacacgc ttgaccaact tatcaggcac aatgaatcag
      121 tacgctcgcc tagcgaatca cccgctaagt gccaagctct ttgcacaaca atgtctacaa
      181 actttctgtg atgttttgaa atgactgttt ttattgattc gcactgtcat gtgaactttc
      241 ccgaattggc cgaggattac ggtgccattg cccaacgcat gggtgagaac cgtgtcaaga
      301 tggccctttg tgtcagtgtg aacttgccgg actgggatgg actgattgcc atggttgagc
      361 gcgagcccac actgtggggt tccgtgggcg tgcaccctga ttatgagaac gagattgaac
      421 ccacggttga cgacctggtg tcgcgcagcc accaccccaa agttgtagcc attggtgaga
      481 cagggcttga ctactatcgc ttgaccggcg atctcgagtg gcaacgtgag cgtttccgta
      541 cccacattcg tgccgccaaa caagccaagt tgccgttaat tatccataca cgccaggcac
      601 aagaagacac catccgcatc ttgcaagaag agggcgctga tgagattggt ggcgtgatgc
      661 attgctttac cgagagctgg gagatggccc agcaaagcat ggaacttggc ttttatgtgt
      721 cgttttctgg gattgtgacc tttaagaacg cccgtgactt gcaagagacc gccagcaaaa
      781 tgcccatgga tcgtctgttg attgaaaccg actcgccata tctggcgcct gtgccgtatc
      841 gtggtaaacg caatgaccca tcgctcgtgg tgcacgtggc agacaagatt gccgagctcc
      901 aagggatatc agcccaagag gttgcggacc aatcgacaga gaatttcttt agacttttca
      961 gtaaggtaga gcgtcaaact gaagttgcat cttaagtcgt attggtatgt ttgtgtattg
     1021 agtcacacga actatttaaa acgagctgtc taacacgata tataggaaaa atcttgctag
     1081 aaatcacgca aataaaaagc agcaaattac tgattcaaaa gaatatgtgg tcggtatttc
     1141 tggtgctcgc tgcgattatc gggttgctgg cacaaccggt caatgcccaa tcacaagagg
     1201 atctttggat ttacgtcacc aacgatcgag ccagcagcgt gcaaacattg cttgatcggg
     1261 gcctagaccc caatacccgg gatccgcgag gcaacccgat catcatgcag gccgtgcgcg
     1321 atgattcttg ggcagtcttt gatgtggtgc tcaatcaccc taaaaccgat gtacgcatca
     1381 tgaacggcta tcaagaaacc ccgctcatgt atgtcagcct agtgggtgac cttgagcgtg
     1441 ccaagcagtt agttgccaaa ggcgcgcaaa ttaaccacct tggatggacg ccattgcact
     1501 acgcggcctc gactggtcaa gtgcctgtgg ttgagtacct tctagcacaa ggggcaatgc
     1561 caaatgcacc ggcgcctgat ggctcaagcc ccatcaccat ggccgcgcaa gctggcgcca
     1621 ttgataccgt gcaagtgttg ttgaaggccg gtgcagatcc gagtgccatc aacacaaacg
     1681 gcgtgaatgc agctcaagca gcccgcaacc gagggcacac cgacttggcc gatgcccttg
     1741 acgaagtgat cgttaaacga cgtcaaggac agtaggccag gaagctggtc gagctaggcc
     1801 agcggtggca acttaggcgc attgggattg agttgctcag acagccggta agcgcgctgt
     1861 gtggcgtcac gctggtgaat gtcgttatac caacgcttga cgttgggaaa ctcattaata
     1921 tcaatctgct ggcgcgggaa agcggcaatc caggggaagc aggccatgtc ggcgatcgag
     1981 tagtcaccag cgatgaactg acgtccctct agacgtttgt tcagcacacc ataaagtcgc
     2041 gcggtttcat cgacgtagcg tttgatggcg tagggcacct tctcaggtgc aaagttaccg
     2101 aaatggtggt tttgaccggc catcggccct aaaccgccca tctgccagaa caac
//
LOCUS       DATBNL010000458         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174541, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000458 DATBNL010000000
VERSION     DATBNL010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174541"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..159
                     /locus_tag="VIC30_07995"
     CDS             <1..159
                     /locus_tag="VIC30_07995"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY7804355.1"
                     /translation="EWTQGDLVIWDNRMTMHRARPYDDIKYKRELTRVTTLDIEHVHQ
                     PKRQMIRE"
     gene            complement(182..964)
                     /locus_tag="VIC30_08000"
     CDS             complement(182..964)
                     /locus_tag="VIC30_08000"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804356.1"
                     /translation="MHISLENRVALITGGSQGLGKAMAERFASSGADVVLLARRQALL
                     DEVAAEISKNTGRKVKGYSCDVSDIAAVEATWAQVQADFGKVDILVNNAGASARHPID
                     SLGMDKLQADFDMKVKAAMRLVQLALPGMKAQRWGRIINVVNIGAKAPASGTAPTTMS
                     RAAGIAMTKVMAGEFAPDNILVNALCVGQIMSEQWVGYHKKDNPEISYEEYVAMRGKS
                     LPMGRIGQAEEFANVACFLASDAASYVTGVAINVDGGLSPVV"
     gene            1270..>1843
                     /locus_tag="VIC30_08005"
     CDS             1270..>1843
                     /locus_tag="VIC30_08005"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY7804357.1"
                     /translation="MSSKTYTGRAAFLELLIQEGVTHLFGNPGTTELPLMEVVPKYPE
                     LKYVLGLQESIVLGMADGFARATGRLTACNLHCAPGLGHAMGALYTAKFNNSPIIVTA
                     GQYEQGYGLTEPLLYEPLVRLAEPLVKWAVEVERAEDLPRIVHRAAKIALTPPCGPVF
                     ISLPGSILDETVEMDLGQPTSVHTRTRPSED"
BASE COUNT          414 a          494 c          487 g          448 t
ORIGIN      
        1 gaatggacac agggtgacct agtgatttgg gacaatcgga tgaccatgca tcgcgcccga
       61 ccctatgacg atattaagta caagcgagaa ctcactcgcg tgactacctt agatatcgag
      121 catgtacacc aacccaagcg ccagatgatc agagaataac caccgggcgc ttgccgggtt
      181 tttaaaccac cgggcttaat ccaccatcaa cgttgatggc caccccagtg acgtacgatg
      241 ctgcgtctga ggccagaaag caggcaacgt tagcgaactc ttcggcttgt ccgattcgac
      301 ccatgggtag tgatttgccc cgcatcgcga cgtattcctc gtatgagatt tccgggttgt
      361 cttttttgtg ataaccgacc cattgctcag acatgatttg cccaacgcac aacgcattaa
      421 ccaggatgtt gtcgggtgca aattcaccag ccatgacttt ggtcatggca ataccggcgg
      481 cgcggctcat ggtcgtgggt gcggtgccag aagcaggtgc cttggcaccg atattgacca
      541 cattgataat ccgaccccag cgttgggctt tcatgccggg tagggctagt tgcactaggc
      601 gcatcgccgc tttgaccttc atgtcaaagt ccgcctgtag cttgtccatc ccgagtgaat
      661 caattggatg acgagcagaa gctccggcgt tgttaaccag aatatcgact ttgccaaagt
      721 cagcctgcac ttgcgcccac gttgcctcga cagcagcgat gtcactgaca tcacatgaat
      781 aacctttgac tttcctgccg gtgtttttgc tgatttcagc ggctacctcg tcaagcagtg
      841 cctgacgccg ggccagtaac accacgtcag cacccgaact tgcaaagcgc tcggccatgg
      901 ctttgcccaa gccttggctg ccaccggtaa tcagtgcaac ccggttttct aatgagatgt
      961 gcattttgtg tattcccctg ttttgtaatg attgacgctt ggcgcgggtt tgcaaacacc
     1021 ccgccgttgt ataggcttat cgactgactt gtagtttttt tgcgtttgat gaatgaactg
     1081 tgtttgatta ataacgaacg ttaacgcaag gcctgtctgt gttcaacaat caccgatgtg
     1141 gtgtgcgcgt cgagcttgat ctgggcttaa tgttagcttg atacggtttg ccggcgcgat
     1201 accggtttgc gagtttgtaa ccttcgataa acaatgacct taagaacgaa atacaaaggg
     1261 cgaaacacca tgagcagcaa aacctataca ggccgcgcgg cctttctcga actcctgatt
     1321 caagagggtg tgacccactt gttcggcaat cccggcacca cggagttgcc gctcatggaa
     1381 gtggtgccca agtacccaga actgaagtac gtgcttggtt tgcaagaaag cattgtgttg
     1441 ggcatggccg atggatttgc tcgcgccacc ggtcgattaa ctgcctgcaa cctgcactgt
     1501 gccccaggac ttgggcatgc catgggtgcg ctctacacgg ccaagttcaa caactcaccg
     1561 atcattgtga ctgccggaca atacgagcag ggctatgggc taactgaacc cttgctttac
     1621 gagccattgg tgcgtttggc tgagccattg gtgaagtggg cggtcgaagt cgagcgggcc
     1681 gaagatttgc cacgcattgt gcatcgcgcc gcaaaaatcg cactcacgcc accttgtggt
     1741 ccggtgttta tcagcctgcc tggcagcatt ttggatgaaa ccgtggagat ggatctgggg
     1801 caacccacgt ctgttcatac ccgcacgcgt ccgagcgaag act
//
LOCUS       DATBNL010000459         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_194503, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000459 DATBNL010000000
VERSION     DATBNL010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194503"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="VIC30_08010"
     CDS             <1..590
                     /locus_tag="VIC30_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEY7804358.1"
                     /translation="AVNAFCAVRPPGHHASVARAMGFCFFNNIAVGIAHALANHGLSR
                     VAIVDFDVHHGNGTEAIFAGDDRVLMCSYFQYPLFPDCGVHDPAANMCNVPVDAYTRG
                     DHIRELVTEHWLPRLEAHKPEMIFISAGFDAHREDDMAQLGLVESDYVWLTEQLMAVA
                     DKHASGRIVSALEGGYNLSALARSVVAHVRTLAKL"
     gene            791..1540
                     /locus_tag="VIC30_08015"
     CDS             791..1540
                     /locus_tag="VIC30_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEY7804359.1"
                     /translation="MKVLVPVKRVVDYNVKVRVKSDQTGVDIANVKMSMNPFDEIAVE
                     EAMRLKEKGTVTEVVAVSCGVAQCQETLRTAMAIGADRGILVQTDEELQPLAVAKILK
                     SLADKEQPELIILGKQAIDDDANQTGQMLAALLGWPQATFASKVEVADGKVTVTREVD
                     GGLETLALTLPAIVTTDLRLNEPRYVTLPNIMKAKKKPLETLAPADLGVDAAPRLKTL
                     KVCDPPSRSAGIKVPDVAALVDKLKNEAKVV"
     gene            1544..>1665
                     /locus_tag="VIC30_08020"
     CDS             1544..>1665
                     /locus_tag="VIC30_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEY7804360.1"
                     /translation="MSVLVIAEHDNAQLKGATLNVVAAAAQIDADVHVLVAGHGA"
BASE COUNT          370 a          441 c          482 g          372 t
ORIGIN      
        1 aagccgtcaa cgcgttctgt gcggtgcgcc caccgggtca tcacgcatca gtggcgcgcg
       61 ccatggggtt ttgttttttt aataacattg ccgtgggcat tgcccatgcg cttgccaatc
      121 acggtttgtc tcgtgtggcg attgtggatt tcgatgttca tcacggcaat ggcactgagg
      181 caatatttgc cggcgatgat cgggtgctga tgtgcagcta cttccagtac cctttgtttc
      241 ctgactgcgg cgtgcatgac cccgcggcca acatgtgtaa cgtgccagtc gacgcataca
      301 cccgtggtga ccatattcgg gagctggtta ctgagcactg gttgcctcgc cttgaggccc
      361 ataagccgga aatgatcttt atctcggccg ggtttgatgc gcaccgcgaa gacgacatgg
      421 cgcaactcgg gttagtggag tcagactacg tttggctgac cgaacaactc atggccgtgg
      481 ctgacaaaca tgccagtggt cgcatcgtca gtgcgctaga aggtggctac aacttgtcag
      541 ctttagcgcg cagtgtggtc gcccatgtac ggaccttggc gaagttgtag aatggactgc
      601 aaatagacag aaaatccgca tccagggtca acggtggtta aaaatgcctt tgcttgcatt
      661 tgcttgcctt gtgatgcgtt gggggaagaa gtaccaacac cggtgggtta agtgcggttc
      721 gcgcttgatc gccagtcttc gggtttgtgc tgtctagccg attttgaaga ccaatactgg
      781 agaaaatttg atgaaggtcc tcgtacctgt aaagcgcgtg gtggactaca acgtcaaggt
      841 cagggtcaag tctgaccaaa cgggcgttga tatcgccaac gtcaagatgt ccatgaatcc
      901 gttcgatgaa atcgctgtcg aagaggccat gcgcctaaaa gaaaaaggca ctgtcaccga
      961 ggtggtagct gtttcttgcg gtgtggccca atgccaggaa acgctgcgca cggccatggc
     1021 cattggtgct gatcgcggca ttctggtgca aaccgatgaa gaactgcagc ccttggctgt
     1081 ggctaagatc ctgaagtcac tggccgacaa agagcaacct gagctcatca tcttgggcaa
     1141 gcaagccatt gatgatgacg ccaaccagac tggccaaatg ctcgctgcgt tgctcggctg
     1201 gccgcaagcc acgtttgcca gcaaagttga agtcgctgac ggtaaagtca cggtcacccg
     1261 cgaagtcgat ggcggtttgg agaccctggc cttgacgctg ccggccattg tgaccactga
     1321 cctgcgctta aacgagccac gttatgtgac attgcccaac atcatgaagg ccaagaaaaa
     1381 gccgcttgaa acgctagcgc ccgccgatct cggtgttgac gccgcgccgc gccttaaaac
     1441 ccttaaagtc tgcgaccccc cgagccgttc ggcaggtatc aaggtgcccg atgtggcggc
     1501 actggtcgac aaacttaaaa acgaagcgaa ggtggtgtag atcatgtccg tactcgtcat
     1561 tgctgaacac gacaacgcgc aactcaaagg cgcaaccctc aacgtagtgg ccgcggccgc
     1621 tcaaatcgac gccgacgttc atgtgttggt ggccggtcac ggcgc
//
LOCUS       DATBNL010000460         2901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_155132, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000460 DATBNL010000000
VERSION     DATBNL010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155132"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VIC30_08025"
     CDS             <1..336
                     /locus_tag="VIC30_08025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804361.1"
                     /translation="LTPIYPQPALERALSVRLSLRQTHVLLEPRLPVRWQQIDLLLVQ
                     GAQIDERHGYLMANLQGRWMAQAEHPSSLSTAADLNTDQTTTALDPLVQTHGTNLEGE
                     DLETEYDIH"
     gene            437..835
                     /locus_tag="VIC30_08030"
     CDS             437..835
                     /locus_tag="VIC30_08030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804362.1"
                     /translation="MMLSLLMGIVGMAVLTPAAAGKGPPPKKPMTVLAMMKVESDYLA
                     KWQAEQRKLAVRRRPGPSLLSIYGVLPQLRATVLVNGHEVVFEQGQKRPVAAHARHTG
                     SMRLRYIKPPCVSFVHQARRQTLCLPKVGS"
     gene            895..2565
                     /locus_tag="VIC30_08035"
     CDS             895..2565
                     /locus_tag="VIC30_08035"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEY7804363.1"
                     /translation="MHEAVGLLGSDTPALPDEVELLFDRIQVTDAQIANRMCPVRLPN
                     GRAQVWVLPEHAHDDQARALVLALSQYGLPLAEPSRQMVSAARLGELNRGLRRDNAAF
                     TSMARAASTPKHVLVSLLDDLIGWALKSDASDIHLTIGSTRRFADVAFTINGGCVRPE
                     PFSQLSTQIVHELLSVCWMTVQGGNGAVFDLTCEQQGRFERVIDGDAIALRWASLVVQ
                     GGVSVCWRLLNRACWYEPPSLHTLGYEASQYQRLLRATEGHGGLVVFAGLVGSGKSTS
                     LAALMKLIPASRKIITLEDPVEYVISNALQCAVSGFAADTATNQLASKLKTIKRSAAH
                     DVLIGELRDDLGAQAVVDLVLAGTNVYTTVHASSALQILTRLSSTLIGVPESLLAMPG
                     FVKLLVYQVLLKQLCPICALDATQWLRTDDALPGAAHASPDAKRSWLSQLAEITGCDW
                     RSWRFRRPAGCDDCRHPDDAQSTGYRSRLLVAEMLEPASEPAFYTALAGVPLWPEVAK
                     WQRQAGQACSPLIGYRPVAQVAADCLASGQLDARDYVLRFAPKLAEAA"
     gene            2562..>2901
                     /locus_tag="VIC30_08040"
     CDS             2562..>2901
                     /locus_tag="VIC30_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804364.1"
                     /translation="MSLSKAQSQTQVAAGVPLRIRMAAWRFRSQRAAYYEFLGELLHS
                     QALEQTLLLTFEQDSWRHGNGSTRGRLAGWWASQYAASGGQLAQTWAGTLPDSDLQGI
                     ALAEQAGQAAL"
BASE COUNT          606 a          792 c          875 g          628 t
ORIGIN      
        1 ttaacaccca tttatccaca gcctgcgctt gaacgcgcgc tgtcggttcg cctctcattg
       61 cgccagaccc atgtgctcct tgagccacgg ctaccggttc gttggcaaca aattgacttg
      121 ttgctcgtgc aaggcgcgca aattgacgag cgtcatggct atctgatggc gaacttgcag
      181 ggccgctgga tggcgcaggc agagcaccct agttcgttga gcacagcagc ggacttgaac
      241 acagatcaaa caacaacggc gctcgatcca ttggttcaga cgcacggaac aaatcttgaa
      301 ggagaggacc ttgaaaccga atatgacatt cattaatcca aggacaaagc caaaaataga
      361 cataaccaca gagcgaacca caaagacaaa cccaaccaca aacacaacgc caaagccgat
      421 ggctttgcgc cgccggatga tgctgtcact tctgatgggc atagtgggca tggcagtgct
      481 cacgcccgcg gcggcgggta agggcccacc ccctaaaaaa ccgatgaccg tgctggccat
      541 gatgaaagtc gagtccgact atctagccaa atggcaggcc gagcagcgca aactcgctgt
      601 gcgccgacgt cccggcccat cactgctgtc aatctatggt gtgttgccgc aactacgtgc
      661 cacggtattg gtcaacggcc atgaggtggt gtttgagcaa ggacaaaagc gaccagtggc
      721 ggcgcacgca cgccacaccg gctcgatgcg attgcgctac atcaagccgc cgtgtgtgtc
      781 ctttgtgcat caggctcgac gccagacctt gtgcctgcct aaggtggggt catgatgcga
      841 ggtgcgcgca gcccattagc gtcagcctca gttttaaggg tcggagaaaa cctcatgcac
      901 gaggcagtcg ggctcttggg tagcgatacg ccagccttgc ccgatgaggt cgaactgttg
      961 tttgaccgga tacaggtcac cgatgcgcaa atcgccaatc gcatgtgccc agttcgcctg
     1021 cccaatggcc gcgcacaggt ctgggtgtta cccgagcatg cgcatgatga tcaggcgcgt
     1081 gctttggttt tagccttgtc gcagtatggg ctgccacttg ccgagccctc gcggcagatg
     1141 gtgtcggcag cgcgtttggg cgaactcaat cggggactgc gtcgtgacaa tgccgcgttc
     1201 acgtcgatgg cgcgcgcagc cagtacaccc aagcacgtgc tggtgtcgtt gctcgatgac
     1261 ttgattggct gggcactgaa gtccgatgcc agtgatattc atctgaccat tggcagcaca
     1321 cgccggtttg ccgatgtggc ttttacgatt aatggcggct gcgtcaggcc cgagccgttt
     1381 tcgcaactat caacccagat tgttcacgaa ctgttgtcag tctgttggat gactgtgcaa
     1441 ggtggcaatg gcgcggtgtt tgacttgacc tgcgaacagc aagggcggtt tgaacgcgtc
     1501 attgacggcg atgccattgc gctgcggtgg gcttcgctcg tggtgcaagg aggcgttagt
     1561 gtctgttggc gattgcttaa tcgcgcttgt tggtatgagc caccgtcatt acacacgctt
     1621 ggctacgagg cgagccagta tcagcgactg ctacgtgcca ctgaaggtca tggtgggtta
     1681 gtggtgtttg ccggtctggt tggttcgggt aagtcaacgt cattggcggc actcatgaaa
     1741 ctgattcccg cctcgcgcaa gatcatcaca ctagaagacc cggttgagta tgtgatttcc
     1801 aatgcattgc aatgcgccgt gtccgggttt gcggccgata ccgcaacaaa tcaattagcg
     1861 agcaagctaa aaaccattaa acgaagcgcg gcacacgatg tgttaattgg tgagttacgc
     1921 gatgaccttg gcgcacaggc ggtagttgat ctggtgttgg cgggcacgaa tgtctacacc
     1981 acggtgcacg catcatcggc acttcagata ctgacgcgac tgagctcgac gctcattggt
     2041 gtgcccgaga gtttgttggc catgcccggg tttgtgaagc tgctcgtcta tcaagtgcta
     2101 ctaaagcagc tttgcccgat atgcgccttg gatgcaaccc aatggttacg aacagacgac
     2161 gcactgcctg gtgcagcaca cgcatcgcca gacgccaagc gcagttggtt gtcacaactc
     2221 gctgagatca ccggctgcga ctggcggtcc tggcggtttc gtcgcccggc cggttgtgat
     2281 gattgccgtc atcccgatga tgcccaaagc accggataca gatcccgttt attggtggct
     2341 gagatgcttg agccggccag tgagccagcg ttctatacgg cgctggctgg tgtgccttta
     2401 tggcctgaag tagccaagtg gcagcgccag gctggccagg cgtgcagtcc attgatcggc
     2461 tatcggccag tggcgcaagt cgctgccgat tgtttggctt caggccagct cgatgcacgt
     2521 gactatgtgc tgcggtttgc gcccaagcta gcggaggcgg catgagtcta tctaaagcgc
     2581 aatctcaaac ccaggtcgca gcaggggtgc cgctgcgtat tcggatggct gcgtggcgtt
     2641 tccgctcaca gcgcgcagcc tattacgagt ttcttggtga gctactgcac agtcaagcgc
     2701 ttgagcaaac cctgttgttg acctttgagc aagacagctg gcgtcatggc aatggcagca
     2761 cgcgtgggcg cttggctggc tggtgggcaa gtcagtacgc cgctagcggc gggcaactgg
     2821 cgcagacgtg ggcgggcaca ctgcccgact cggacttaca aggcattgcg ttggccgagc
     2881 aagcgggaca agcggcattg a
//
LOCUS       DATBNL010000461         2185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_125096, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000461 DATBNL010000000
VERSION     DATBNL010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125096"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..2025
                     /locus_tag="VIC30_08045"
     CDS             64..2025
                     /locus_tag="VIC30_08045"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HEY7804365.1"
                     /translation="MHSEAAAVPKAEQSSPRNRVQGPVYWTVLTLGVLGLLMAINQTF
                     TLRLFGFTPLGNSFLYYLIGLFLAVAFLIYPARKADAVRTPWYDWVLGAAAIGCAVFL
                     GYHGLSIIEEGWDFSAPVEATVVSAVLLVLIIEGVRRCGGTPLLVVVLLFGAYPIFAD
                     AMPGFLWGTQYTVGETIRAHVMGVESIIGIPMQVVANLVIGFVVFGAALTVTGGGDFF
                     MNFATSLMGKSRGGPAKVAVLSSGLMGSLSGSVISNILTTGAFTIPTMKRTGYPAQYA
                     GAVEACASTGGTLMPPVMGAVAFIMASFLGVPYADVVVAAFLPAVLFYVALLFQVDNY
                     AAREGLKGLSPEEIPKLGPVLKDGWPYLFSLGMLIYMLLVMRLESYAPYYATLVLLVV
                     SAFKKSHRLSLQRLLDLLKELSVSVANLVAILAGIGLVVGGLSYTGVAGAFSRELLLY
                     AGGSIPLMLIAGAVTSFVLGMGMTVSACYIFLSILLAPALVEAGLNPLASHLFILYWG
                     MMSYITPPVSLAAITAANVAGANAWATGLNAMRLGSVLFILPFMFVVNPALILQGEVT
                     VILLAAMTAITAMWIFASGLEGYLYRAGTIAWPVRIVLFFAGGMLAFPGLKTDAVGLS
                     CLALAYVLATFVPRMCILDSLPVPNDEDS"
BASE COUNT          378 a          540 c          642 g          625 t
ORIGIN      
        1 cactgggtac cgggtttcgg tacataaggc cgcccggtgg cggcatttga tcgagttcgt
       61 ttcatgcatt cagaagctgc tgctgtgccg aaagccgagc aatcatcacc ccgtaatcgg
      121 gtgcaaggtc cggtttactg gactgtctta acccttggcg tgttgggcct gcttatggcc
      181 atcaaccaaa cgttcacgct caggctgttt gggttcacgc cattaggtaa ttcctttctg
      241 tattacctga tcggtttgtt tttggccgtg gcatttctca tatatccggc cagaaaggct
      301 gatgctgttc gcacaccctg gtacgactgg gtactgggtg cggcagccat cggttgcgcg
      361 gtgtttttag gctatcacgg tctttctatc atcgaagagg gttgggactt ctcggcgcct
      421 gtagaagcga cagtggtgtc agcggtctta ttggtgctta tcatcgaagg cgtcaggcgc
      481 tgtggtggca caccactgtt agtcgtggtg ctgctgttcg gtgcttaccc aatctttgcc
      541 gatgccatgc cgggtttcct gtggggcacg caatacaccg ttggtgagac cattcgcgcc
      601 catgtgatgg gtgtcgagag cattatcggg attcctatgc aggtggtggc caacctagtg
      661 attggcttcg tggtgtttgg cgctgcgtta acggtcacgg gcggtggtga cttttttatg
      721 aattttgcca cctcgctgat gggtaagagt cgcggtgggc ccgccaaagt ggccgtgctc
      781 tccagtggtt tgatgggcag tttgtctggg agcgtgatct ccaatatttt gacaaccggt
      841 gccttcacca tcccaaccat gaagcgcacg ggttatccag cccaatacgc tggcgccgtt
      901 gaagcgtgtg catcgacagg tggcacgctg atgccaccgg tgatgggtgc ggtggcattc
      961 atcatggcct catttcttgg ggtgccctat gccgatgtgg ttgtcgcggc ctttctaccg
     1021 gcggtgttgt tctatgtcgc gctcttgttt caggttgaca actatgccgc gcgtgagggc
     1081 ctaaaaggtt tgtcgcctga ggaaatcccg aagcttggtc cggtacttaa agatggttgg
     1141 ccttacctct ttagtttggg catgctgatt tacatgttgt tggtgatgcg ccttgaaagc
     1201 tatgcacctt attacgccac cttggtgttg ttggtggtct cggctttcaa aaaaagccac
     1261 cgattgagtc tgcaacgctt gttggactta ttaaaagagc tcagcgtaag tgtggccaat
     1321 ttggtggcga ttttggcggg cattggcttg gttgttggtg gcctgtcgta taccggtgtg
     1381 gcgggtgcgt tctcgcgcga gttgcttttg tatgcgggcg gcagtattcc gctgatgctc
     1441 attgccggtg ctgtcacaag ctttgtgttg ggcatgggca tgacagttag cgcttgctac
     1501 atcttcctgt cgattctgct cgcgccggca ttggtcgagg caggtctaaa cccactggcc
     1561 agtcacttgt tcattctgta ctggggcatg atgtcttaca tcacgccacc ggtgtcattg
     1621 gcagcgatca cggcagccaa tgttgccgga gccaatgcct gggcaactgg tttaaatgcc
     1681 atgcgtttgg gtagcgtgtt gtttatcttg ccgtttatgt ttgtggtcaa cccagccttg
     1741 atcttgcaag gtgaggtgac cgtgattctg ttggcagcaa tgacggcaat caccgccatg
     1801 tggatatttg cgtctggcct ggaaggttat ttgtacaggg cggggaccat cgcgtggccc
     1861 gtgcgtatcg tgttgttttt tgccggtggc atgcttgcgt tcccaggcct taaaacagac
     1921 gcggtcgggt taagttgcct agcactggcg tatgtgttgg cgacttttgt gccgcgcatg
     1981 tgtattcttg acagcctccc cgtcccaaac gacgaggatt cctagcggct ttatcaagcc
     2041 gccaagattg gacgtgtatc gctacttccc aatggttcct gcttcatcgt taaaaccaac
     2101 gtttcaactc cacaggcgag cacccgatgc cctcgggcta atacatttaa cgcacccacc
     2161 aagtcagcgt tttccgtata accgc
//
LOCUS       DATBNL010000462         3682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_75361, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000462 DATBNL010000000
VERSION     DATBNL010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75361"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1472)
                     /locus_tag="VIC30_08050"
     CDS             complement(<1..1472)
                     /locus_tag="VIC30_08050"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY7804366.1"
                     /translation="MASENFKRSWPAGIMALLCRAWDFVLKPGGAVWLLLGTLIWLGI
                     FGWPRSLHIPDEGRYVGVAWDMVRFDSTWTPLLNALPYFHKPPLFYWLTEASFLLFGA
                     HEWAARLPSILISWFTVVALYLFVRRHRGVEVATISVLALITMPYYYGASQYANLDML
                     VAGMMVLTILAGAEAVSRAANGERRAAWFAVAAGFLAALAVLSKGLIGVVLPGGILFF
                     WLLVTRRWIGFKVLLAPGVWMAFLSIMIPWFALMEIYYPGFLHYFFVYQHFERYLSDG
                     FNQQQPFWFFLPVVFGMSMPWTAWLIRFGWQRGPLNAESSWLWLMGLWIVVIMVFFSI
                     PTSKLIGYTVPVLPPLAVLIAEAIFATFKGARAQRDMRWAAITFVAAALSCMLALVIF
                     LFANDRSSKPFVKQFESQMTVNDQFVFLDVYPFDMQFYTQDPKPAWVVFNWPALPKGD
                     TWRNELAEAGEHVPEKAREVLITPDQVLPRICAQPNRTYW"
     gene            1466..1657
                     /locus_tag="VIC30_08055"
     CDS             1466..1657
                     /locus_tag="VIC30_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804367.1"
                     /translation="MPPNNPFLKQQMIDGLRLARQTIAAPDYNCTDCKCADDNCIIIL
                     AGKNHSVANVGGQLQWPVS"
     gene            complement(1652..2491)
                     /locus_tag="VIC30_08060"
     CDS             complement(1652..2491)
                     /locus_tag="VIC30_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEY7804368.1"
                     /translation="MASPDPTDSKQAEFDNERRFGSVDRAYGREVTPDLAQRHVVVVG
                     LGGVGSWASEALARSGLGQLTLIDLDHVAPSNINRQVHALDHTIGQAKVLAMRERIGA
                     INAACTVDVVEEFVDADNVHVTIPLSADVVLDCTDQVSAKAAMVLCARERGQRLIVCG
                     AAGGKTDALSLRFGDLRDTSHDALLARLRTILRKRHGFAAAQKNPAGKATSKRPARMG
                     VEVLWFEQPAHRPLQISDTGTQVVPLSCAGYGSLVTVTAAMGLAAAGQALQGLVNLLE
                     KRS"
     gene            2727..3566
                     /locus_tag="VIC30_08065"
     CDS             2727..3566
                     /locus_tag="VIC30_08065"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804369.1"
                     /translation="MAAVWCVLLMLMHTALAGGRVAVMLNAVELGISKFGVGMLIACF
                     ALLPMFMAVKAGRRIDVRGSYRAMWLAALISAVGTMLPWVWPNWITLGLAAASIGIGH
                     MGFQIAVQGLLGKADPATRLRNYSWLAMAMAVSGFSGPLIAGLSIDYIGHRWAFFMLG
                     LCPAVAFVGVWRLRRVLIDSHEPQSAPAQPNRLRDLWAIKPLRYALLSNLLLASAWDT
                     HYFLVPLYGVQMDLSATMIGLILAAFSVATFCIRMLLPLIQGRVKPWTMNDTPHHLTA
                     YGA"
BASE COUNT          897 a         1143 c          918 g          724 t
ORIGIN      
        1 aaccaatacg tccgattcgg ttgcgcacaa atgcgtggta acacctgatc tggcgtaatc
       61 aacacctcgc gtgccttctc aggcacatgc tcaccagcct cagccagttc gttacgccaa
      121 gtatcaccct tgggcaaagc aggccagtta aacaccaccc acgctggctt ggggtcttgg
      181 gtgtaaaact gcatatcgaa cggatagaca tcgagaaaaa cgaactggtc gttgaccgtc
      241 atttgcgact cgaactgctt aacaaatggc ttggagctgc gatcgttagc aaacaggaaa
      301 atcaccaatg ccagcatgca cgacaaagcg gctgccacaa acgtgatcgc agcccaacgc
      361 atgtcacgct gcgcgcgagc ccccttgaag gtcgcaaaaa tcgcctctgc gatgagcact
      421 gctagcggtg gcagcacggg caccgtgtag ccaataagct tggatgtcgg tatcgagaaa
      481 aacaccatga tcaccacaat ccaaagcccc atgagccaca accagctcga ctcagcattt
      541 agtggcccgc gctgccaacc aaagcgaatc agccacgccg tccatggcat gctcatgcca
      601 aacaccaccg gcaagaaaaa ccagaacggc tgctgctgat taaacccatc actcagatac
      661 cgttcaaagt gctggtaaac aaagaagtaa tgcaagaatc ccggatagta gatctccata
      721 agcgcaaacc acgggatcat gatcgacaaa aacgccatcc acacgccagg cgccaacaac
      781 actttgaatc caatccaacg gcgggtcact aacaaccaga aaaacaaaat cccgcccggc
      841 aataccaccc cgatgagccc tttggataga accgccaacg ccgccagaaa accggctgcc
      901 acggcaaacc atgccgcccg ccgctcgcca ttggctgccc gcgagacagc ttcagcacca
      961 gccagaatgg tgagcaccat catgcccgcg actaacatgt cgaggttggc gtattgggat
     1021 gcgccgtagt aatacggcat ggtaatgagc gccagcacgc tgatcgtagc cacctcaacc
     1081 ccgcgatgac gccgcacgaa caagtacagc gcaaccaccg taaaccacga gatcagaatc
     1141 gacggtaagc gagcggccca ctcatgagcc ccgaacaaca gaaacgaagc ttcagttaac
     1201 caataaaaca gcggcggctt gtggaaataa ggtagtgcgt ttagaagcgg cgtccatgta
     1261 ctatcaaaac gcaccatgtc ccaagccaca cccacgtagc gaccctcatc ggggatgtgc
     1321 aatgaacgcg gccacccaaa aatgcccagc caaatcagag tgcctagcaa caaccacacg
     1381 gcgccgccgg gtttaagcac aaagtcccat gcccggcaca acaacgccat gatgcccgcc
     1441 ggccaagaac gcttgaagtt ttctgatgcc accaaacaac cccttcttaa aacaacaaat
     1501 gattgacgga ctacgcctgg ctcgacagac gattgctgcg cccgactaca actgcaccga
     1561 ctgcaaatgc gctgacgaca actgcatcat catactggca ggcaagaatc attcggtcgc
     1621 caatgtcggt ggccaacttc agtggccagt gtcatgatct tttttccaac aaattcacca
     1681 acccttgcaa cgcctgccct gcagctgcca atcccatggc ggccgtgact gtcaccaatg
     1741 aaccgtagcc ggcacacgac agtggcacca cttgggtgcc ggtgtcgctt atttgcaatg
     1801 ggcgatgtgc gggctgctca aaccacaaga cctcaacgcc catgcgcgcg gggcgcttac
     1861 tcgtggcttt acctgccgga tttttctgtg cagcggcaaa cccatggcgt ttgcgcaaga
     1921 tcgtacgcaa cctagcgagc agcgcgtcat ggctcgtgtc acgcagatca ccaaagcgca
     1981 acgacaaggc atcggtcttg ccaccagcag ccccacaaac aatcaagcgc tggccccgct
     2041 cgcgggcaca cagcaccatc gcagccttgg cactgacttg gtcggtgcaa tcgagtacga
     2101 cgtcagctga caacggtatg gtgacgtgca cattgtcggc atccacaaac tcctcaacca
     2161 cgtcaaccgt gcaagcggca ttgatcgcac caatacgctc ccgcatcgcg agcaccttgg
     2221 cctgcccgat cgtgtgatca agcgcatgca cttgccggtt gatattggac ggggccacat
     2281 gatcaaggtc aatcagggtc aactgcccca gaccgctgcg ggcaagtgct tcgctggccc
     2341 atgagcccac tccacccaaa cccaccacca ccacatggcg ttgggccaaa tcaggcgtga
     2401 cttcacgacc ataggcccga tccaccgatc caaaccggcg ttcgttgtca aactctgctt
     2461 gctttgagtc agttgggtca ggtgatgcca taaaacgtta tctcgaggat gtacgactgg
     2521 attttgacat gacattgcgc tgccggcgcc ccagacgcat tcaagcgtgt tcaaaacgaa
     2581 accgatgcgt acccaaaccg cacccgaatc gtaccctcca cgcgctgaat ctctcgacaa
     2641 cagcgcgcca tcaccgcaca atctcgctca aacaacacaa tatgaacctt tccgcaacac
     2701 aaccctcttt gcaccggtgg ctgcccatgg ccgctgtatg gtgcgtgctt ttaatgctca
     2761 tgcacacggc actggccggt gggcgtgtgg ctgtcatgct caatgctgtt gagctcggta
     2821 tcagcaagtt cggcgtgggc atgctcattg cctgctttgc gcttttgccc atgttcatgg
     2881 ctgtcaaggc gggccgccgc attgacgtgc gcggcagtta ccgggccatg tggctggcgg
     2941 cgttgatttc ggcagtgggc acgatgctac cttgggtctg gccgaactgg atcacactcg
     3001 gattggcagc agcctcgatc ggcattggtc acatggggtt tcaaattgca gtccaaggac
     3061 tacttggtaa agccgatccg gcgacacgtt tgcgcaatta ttcctggcta gccatggcca
     3121 tggccgtgtc cgggtttagc ggcccattaa ttgcgggtct ttcaattgac tatatcggtc
     3181 atcggtgggc attttttatg ctcggacttt gtccggctgt cgcatttgtg ggcgtctggc
     3241 gcctgcgccg agtgttaatc gatagccacg aaccacaatc cgcaccggcg cagcccaacc
     3301 gactgcgtga cttgtgggca atcaaaccac tacgctacgc gctgttgtct aaccttttgt
     3361 tggctagcgc ctgggacacc cactactttc tagtgccgtt atacggcgta caaatggact
     3421 tgagtgcgac catgatcggg ctcattctgg cggcgttttc tgtggcgacc ttctgcattc
     3481 gcatgctgtt gcccttaata caagggcggg taaagccatg gaccatgaat gacactcccc
     3541 accacctaac cgcctatggc gcttgaggtg ggggtttctt ggttcatcga tctgagcacc
     3601 gcactgtttc cagcgccgcg acttaccgcg atctccccaa gcgtaaattc ggagcagtcc
     3661 gcccctactg ttttcttgcg ca
//
LOCUS       DATBNL010000463         4017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_15817, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000463 DATBNL010000000
VERSION     DATBNL010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4017
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15817"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..159
                     /locus_tag="VIC30_08070"
     CDS             <1..159
                     /locus_tag="VIC30_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEY7804370.1"
                     /translation="FKAGDLAGHVASQVGGKGGGRPDMAMGGGTEAGQLAAALKSVPA
                     WIETNLKR"
     gene            168..416
                     /locus_tag="VIC30_08075"
     CDS             168..416
                     /locus_tag="VIC30_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018575559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEY7804371.1"
                     /translation="MTDMAFEKVAATVDASGLECPLPILKAKKALSTLEPGQVLEVIT
                     TDRKAKQDFDAFCRQTGNPLLEHRDVGEKVHHFLRRRA"
     gene            480..734
                     /gene="rpsP"
                     /locus_tag="VIC30_08080"
     CDS             480..734
                     /gene="rpsP"
                     /locus_tag="VIC30_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003268924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEY7804372.1"
                     /translation="MVVIRMARGGSKRRPFYSLVATDSRDRRDGRFIERVGFYNPVAP
                     EGDERIRIQMDRVTYWQGVGAQLSPSVARLVKEYGKQVAA"
     gene            752..1351
                     /gene="rimM"
                     /locus_tag="VIC30_08085"
     CDS             752..1351
                     /gene="rimM"
                     /locus_tag="VIC30_08085"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEY7804373.1"
                     /translation="MPDDLIELGRILGAHGIKGWIKIQPFSSDSQALGTTKRWWMLAP
                     TSPLRSSDARGYSQAKVMDLVWAKPHGAAWIACIKGLHDRDAAQALKGHTILVSRADF
                     PAPDANEYYWVDLIGCHVATDDAGEPEPLGVVESIQDSPAHPILVIRQQIDTGSDDQQ
                     DRLDDKGNPIYSLVPFVDVHVGDVDLKARSILVHWPRDF"
     gene            1500..1826
                     /locus_tag="VIC30_08090"
     CDS             1500..1826
                     /locus_tag="VIC30_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 family protein"
                     /protein_id="HEY7804374.1"
                     /translation="MATRRKTAEQDAQDARLVDPIKDALDQAEDLLREAAGASGEKAD
                     ELREQALETLRRSRLALHDVQDSLLDRGRQAARLTDDYVHERPWQAATVAGVAGLLLG
                     LLIARR"
     gene            1826..2251
                     /locus_tag="VIC30_08095"
     CDS             1826..2251
                     /locus_tag="VIC30_08095"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEY7804375.1"
                     /translation="MAIGDQVKGLSADLLQAITTRLELFGLELQQAKEDVPRLLALWV
                     IGLLSLMFALALLTLFIVAMTWDTEYRDWVVLALFFIYAVAGGGLLWYVRERLRAGGL
                     NPFAATLDELQRDVSCLTQVQLGQSEGSSKTPTDKGNGS"
     gene            2248..2583
                     /locus_tag="VIC30_08100"
     CDS             2248..2583
                     /locus_tag="VIC30_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804376.1"
                     /translation="MTIKHNAEFERAVRIEMLRANAALERRRIAQHGTSMAAALNPSQ
                     LISGLLPSNTRGWVSRGLSLVTRYPHVLTSVLLNRRFKRVRWMSVAALAVGAWAMLSG
                     RTGEDPVDD"
     gene            2592..3353
                     /gene="trmD"
                     /locus_tag="VIC30_08105"
     CDS             2592..3353
                     /gene="trmD"
                     /locus_tag="VIC30_08105"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEY7804377.1"
                     /translation="MRIDILTLFPAYFESLCTSGITGRAFARGLFELNTWNIRDHVHD
                     VHRTVDDRPYGGGPGMVMLAEPLQAALTAARASRTDTPPVVLLAPSGQRFDQETAQNL
                     ATSSGAIVVCGRYEGIDQRFIDQHVDVCWSVGDFVVSGGEPALVPMLDAAVRLLPGAM
                     QQDSHDQDSFQASLSGLLDSPHYTRPETWQGVDIPDVLKSGHHDNIARWRREQSLALT
                     QAKRPDLIERARAAGWLTAQDERFLASLAPKPRGR"
     gene            complement(3367..>4017)
                     /locus_tag="VIC30_08110"
     CDS             complement(3367..>4017)
                     /locus_tag="VIC30_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY7804378.1"
                     /translation="KQACQATLIDVLEEVLRLLHPITPFITEELWQKVSVAARTRRET
                     DDTSVSIQPYPTANENLIDASAETEFASLKARIEAIRALRSEMQLSPGERVPLLAQGP
                     QASLTSQAPYLAFLARLESVQVVEALPEDSGAPIQVVADTRLMLKVEIDVDAERARLD
                     KEIARLEGEIAKANGKLSNASFVEKAPEAVVTQERARVAAFSDTLEQVRTQRARLS"
BASE COUNT          799 a         1056 c         1196 g          966 t
ORIGIN      
        1 ttcaaagccg gtgatctagc tggccacgtc gctagccaag tcggcggcaa aggcggtggg
       61 cgcccggaca tggccatggg tggcggtaca gaggccggtc agttggcagc ggccttgaag
      121 tcggtgccgg cctggattga aaccaaccta aagcgctgag gtgcgacatg accgatatgg
      181 catttgaaaa agtggcagcc acggttgatg catcgggtct ggaatgtccg ttgccgatcc
      241 tgaaagccaa aaaagcgcta tcgaccttag agccaggcca ggtgttggaa gtgattacca
      301 ctgaccgcaa ggccaagcag gatttcgatg cgttttgtcg gcaaaccggc aatcctctgc
      361 ttgagcatcg ggacgttggt gagaaggtgc atcacttttt acgtcgtcgt gcttgaacca
      421 tgctagaatt tctggcttag cccaaatttt gttacctatt tttaaagaag agattaccta
      481 tggtggtgat tcgtatggcg cgcggcggct caaagagacg ccccttttat agcctcgttg
      541 caaccgattc acgcgatcgt cgtgacggcc gttttattga gcgtgtgggt ttctacaacc
      601 ccgtggcacc tgagggtgac gagcgcatcc gtatccagat ggatcgtgtg acgtactggc
      661 agggcgttgg tgctcagctt tcgccgtccg tggcccgttt ggtcaaagag tacggcaagc
      721 aggttgctgc ttaatcagcc aagatacagc cgtgcctgat gaccttatcg agctcggccg
      781 cattctaggt gcgcatggca ttaaaggctg gatcaagatc cagccttttt catcagactc
      841 ccaagccctc ggcacgacca agcgctggtg gatgcttgcg ccgacaagtc ctttgcgttc
      901 ttctgatgcc cgtggttact cgcaggcgaa agtcatggat cttgtttggg caaaacccca
      961 tggagcggcc tggatcgcgt gtattaaagg cctgcacgac agagatgcgg cgcaagcctt
     1021 aaagggccac accatcttgg tgtcgcgcgc tgatttcccc gcccctgacg ctaatgagta
     1081 ttactgggtg gatctcattg gttgccacgt tgcgaccgat gacgccggtg aacccgagcc
     1141 acttggggtg gtggaatcaa tccaagacag cccagcgcac ccgatactcg tcattcgcca
     1201 gcaaatcgac acgggctcag acgatcaaca ggatcgcctt gatgacaagg gcaacccgat
     1261 ttactcgttg gtgccctttg tcgacgttca tgtgggtgat gtagacttaa aagcccggtc
     1321 tattttggtg cactggccgc gtgactttta agtccgccta tttcttaacc tccagttttg
     1381 atttgtgagt gtttgcaggc tgtgcagtgc ttgctttcag ttttgaacca aaccctaatt
     1441 tgtgttgtcc tatcagaaaa ggtctactat ggtagtgacc gtaaaagaag gagtaaatca
     1501 tggctacaag acgtaaaacc gctgagcagg atgctcagga tgcgcgtttg gttgatccca
     1561 tcaaagatgc acttgatcaa gccgaagatc ttttgcgtga agctgctggc gctagcggcg
     1621 agaaagccga tgaattgcgc gagcaagcgc tagagacatt gcgtcgcagt cgcttggctc
     1681 tgcacgacgt gcaagattcg ttgttagacc gcggccgcca ggctgcacgg ctgaccgatg
     1741 actacgtgca tgagcgtcct tggcaggcag ccacggttgc tggtgtggcc ggtttgctac
     1801 tcggactgtt aatcgcccgt cgctaatggc tatcggtgac caagtcaaag gcttatcagc
     1861 cgacctgctg caggcgatca cgactcgtct agagttattc gggcttgagc tgcagcaggc
     1921 caaagaagac gttccacgcc tgttggcgtt gtgggtgatt ggcttgctgt cgctcatgtt
     1981 tgctttggcg ctgttgacgt tatttattgt ggccatgacc tgggataccg agtaccggga
     2041 ctgggtcgtt ttggccttgt tttttattta tgccgtggcc ggaggcggcc tgctctggta
     2101 tgtgcgtgaa cgcttacgag caggtgggct aaaccctttt gcagccactc ttgacgagtt
     2161 acagcgtgat gtgagttgtt tgacgcaagt tcaactcgga cagtcagaag gttcgtctaa
     2221 gacgcctact gacaagggca acggatcatg acgattaaac ataacgccga gttcgagcgg
     2281 gctgttcgca tcgagatgct acgcgccaat gccgcgctcg aacgccgacg catcgcgcaa
     2341 cacggcacga gcatggcggc ggccttaaac ccgtcgcaat tgatcagcgg gttgctgcca
     2401 tccaatacgc gtggttgggt ttcgcgtggc ttgagccttg ttacgcgcta cccgcatgtg
     2461 ctcacgagcg ttttgttgaa tcgacgcttt aagcgagtac gctggatgtc ggtggcagca
     2521 ttggccgttg gtgcctgggc catgttgtct gggcgcaccg gtgaggaccc ggtcgacgac
     2581 tgaagtcacg catgcgaatc gacatcctga cgctgtttcc agcgtatttt gagtctctgt
     2641 gtacatcagg cattactggg cgcgcatttg cgcgcgggct gtttgagtta aacacctgga
     2701 atattcgaga tcacgtgcat gacgtgcatc gcaccgtgga cgatcgtccc tacggcggcg
     2761 ggccaggcat ggtgatgttg gccgagccct tgcaggcggc cttaactgcg gctcgggcga
     2821 gtcgcacaga tacaccaccc gtggtgttgc ttgcgccctc tggccagcga ttcgatcaag
     2881 aaaccgccca gaacttagcc acctcatcag gtgcgattgt tgtgtgtggt cgctacgagg
     2941 ggattgatca acgttttatt gatcaacacg tggacgtttg ttggtccgtg ggcgactttg
     3001 tggtgtctgg cggtgagcca gccttggtac ccatgctcga tgccgccgtg cgattgttgc
     3061 caggcgctat gcaacaagac tcgcatgacc aagactcgtt tcaggccagt ctctcgggtc
     3121 ttttagatag cccacattac acccgcccgg aaacttggca aggggtggat attcctgacg
     3181 tgttgaagtc aggccaccat gacaatattg cccgctggcg ccgcgaacaa tccttggcgc
     3241 tcacgcaagc caagcgcccc gacttgattg aacgtgcgcg ggcggccggg tggttaaccg
     3301 cgcaggatga aaggttcctg gcaagcctgg cacccaagcc gcgcgggcgt taatggcgcg
     3361 gcagcgctaa ctcaaacgag ccctttgtgt ccgcacttgt tcaagtgtgt cgctaaaggc
     3421 tgccacgcgc gcacgctcct gagtcaccac agcttctggc gctttttcta caaaagacgc
     3481 gttggagagc ttgccattgg ctttggcgat ctcaccctct agtctggcga tctctttgtc
     3541 taggcgggct cgctcggcgt caacgtcaat ctcaactttg agcatcaatc gggtgtcggc
     3601 caccacctga atgggcgcgc cactgtcttc gggtagtgcc tccacgacct ggacactctc
     3661 gagcctggct aagaaagcca gatagggtgc ttgtgaagtc aggctggctt gcgggccttg
     3721 tgctaggagc ggcacgcgct cgcctggtga cagttgcatc tcgctgcgca aggcacggat
     3781 ggcctcaatg cgcgctttta agctggcaaa ctctgtctcg gctgaggcgt cgatgagatt
     3841 ttcatttgca gtggggtagg gctggatgct cacgctcgta tcatcggtct cgcggcgtgt
     3901 cctggccgca acggatacct tttgccagag ctcttcggta atgaaggggg taatggggtg
     3961 cagcagtcgc aagacctctt caagcacgtc aatcagtgtg gcttggcagg cttgttt
//
LOCUS       DATBNL010000464         2112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_65440, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000464 DATBNL010000000
VERSION     DATBNL010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65440"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VIC30_08115"
     CDS             complement(<1..242)
                     /locus_tag="VIC30_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY7804379.1"
                     /translation="MAANVALAQINAVVGDFEGNARQIETMARQAAAAGADVLLTPEM
                     ALTGYPAEDLLLRPAFVEQERVALAALAERLADLPGL"
     gene            416..1840
                     /gene="argH"
                     /locus_tag="VIC30_08120"
     CDS             416..1840
                     /gene="argH"
                     /locus_tag="VIC30_08120"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY7804380.1"
                     /translation="MKQNPQPPQNQFANKAQAWSARFSEPVSDLVKRYTASVDFDQRM
                     AIHDITGSLAHAEMLAHVGVISKQDLADIERGMTQIQTEISQGTFEWLLDLEDAHLNI
                     EKRLVELIGDAGKRLHTGRSRNDQVATDIRLWLREQIDLINVQLQALRLGLAELAIEH
                     AQTIMPGFTHLQVAQPVTFGHHLMAYAEMFGRDAERLADCRKRVNRLPLGAAALAGTS
                     YPIDRARVAKTLGFDGVCGNSLDAVSDRDFAIEFCAFSAVLMMHVSRLSEELVLWMSP
                     RVGFITLADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLIALLTLMKGQPLAYNKD
                     NQEDKEGLFDAADTVRDTLTIFADMMHGITVHQENMRDAARQGFATATDLADYLVKKG
                     LPFRDAHEVVAHAVLTCEQRGCDLADLSLTELQAFDARIEDDIHAVLTLEGSVNARDH
                     IGGTAPAQVKAAATALRDELRSAT"
     gene            complement(1876..>2112)
                     /locus_tag="VIC30_08125"
     CDS             complement(1876..>2112)
                     /locus_tag="VIC30_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013522697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase"
                     /protein_id="HEY7804381.1"
                     /translation="MLIDPQREGALAVCEALAAQEANARPARIVYVSCNPATLARDAG
                     VLCGGGAYRLRQAGVVNMFPHTGHVESIAVFEPC"
BASE COUNT          484 a          631 c          551 g          446 t
ORIGIN      
        1 agtcccggca aatctgccaa acgttcggcg agcgccgcca gtgcaacacg ctcttgctcc
       61 acaaacgctg ggcgtagcaa caaatcctca gccggatagc cggtcagtgc catttcaggc
      121 gtgagcaaca catcagcgcc tgccgccgct gcttgtctgg ccatcgtctc gatttgccgg
      181 gcgttaccct caaaatcacc gaccactgca ttgatttgcg ctagcgcgac gtttgccgcc
      241 atggaagtct ctctatgcat aaacgtgaac gctgattatt gcacgccggg tggctaaagg
      301 tcggtttaag catgcgcctt aaacatgcac ctttagcatg cgcctttaac acccatctcc
      361 aaccttcccc atcaccgctg ccgcccgccc gcaagcactc tataatccac aaatcatgaa
      421 acaaaatccc caacccccac aaaaccaatt cgccaacaaa gcccaagcct ggtcggcccg
      481 cttttctgag cctgtctctg acctagtcaa acgctacacc gcctcggtgg actttgacca
      541 acgcatggcc atccatgaca tcaccggatc attggcgcac gccgaaatgc tggcccatgt
      601 tggtgtgatt tccaaacaag acctcgctga cattgagcgt ggcatgacgc aaattcagac
      661 agagatcagt caaggcacct tcgaatggct gctcgacctc gaagatgcgc acttgaacat
      721 agaaaagcgc ttggttgagc tcattggcga tgctggcaaa cgactacaca caggtcgttc
      781 gcgcaatgac caagtcgcca ctgatattcg cctatggttg cgcgaacaaa ttgacttgat
      841 caacgtgcag ttgcaagcac ttcgtctggg acttgctgag ctcgccatcg agcacgcgca
      901 aaccatcatg ccaggcttta cccacctaca agtggctcag cccgtaacct ttggtcacca
      961 cctcatggct tacgccgaga tgtttggacg cgacgctgag cgcttggctg actgccgtaa
     1021 gcgggttaac cgactgccat tgggtgctgc cgcactggct ggcacgagct atcccattga
     1081 tcgcgcacgt gttgctaaaa ccttggggtt tgacggtgtg tgcggcaact cccttgacgc
     1141 ggtctccgac cgggactttg ccatcgagtt ctgcgccttt agcgctgtat tgatgatgca
     1201 tgtgtctcgc ttgtccgaag agctggtgct gtggatgagt ccacgtgtgg gtttcatcac
     1261 cttggctgat cggttctgca cgggcagctc catcatgccg caaaagaaaa accctgatgt
     1321 ccctgaattg gcgcgcggta aaaccgggcg agtcaatggc cacctaatcg cgttgctcac
     1381 cctgatgaaa ggccagccgc tggcctacaa caaggacaat caggaagaca aagaaggttt
     1441 gttcgatgcc gctgacaccg tgcgcgatac gctgaccatc tttgcagaca tgatgcatgg
     1501 catcacggtg caccaagaga acatgcgcga tgccgcacgt caagggtttg ccacggcaac
     1561 tgacttggca gactacttgg tcaagaaggg tttgccgttt cgtgacgccc atgaggtcgt
     1621 ggcgcatgcg gtattaacct gcgaacagcg tggctgtgac ttggcagatt taagcctcac
     1681 tgaactgcag gccttcgatg cacgcattga agacgacatt catgcggtgc tgaccttgga
     1741 agggtcggtc aatgcgcgtg atcacatcgg tggcacggca ccggctcagg tcaaggctgc
     1801 ggccacggct ttgcgtgatg aactgcggag tgccacataa ttaaccacag gatgaaccac
     1861 gcaatcagcc ttagttcagc aaggttcaaa caccgcaatt gactcgacat gcccggtgtg
     1921 ggggaacatg ttcaccacac cggcctgtct tagacgataa gcgccaccgc cacacaaaac
     1981 acccgcgtcg cgtgccagcg tggccggatt gcacgacaca taaacgatgc gcgcaggccg
     2041 ggcatttgct tcttgtgccg ccaacgcctc acagacagcg agtgcacctt cacgctgggg
     2101 gtcaatcagc at
//
LOCUS       DATBNL010000465         3039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_25401, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000465 DATBNL010000000
VERSION     DATBNL010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25401"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VIC30_08130"
     CDS             <1..512
                     /locus_tag="VIC30_08130"
                     /inference="COORDINATES: protein motif:HMM:NF019421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HEY7804382.1"
                     /translation="PVYHCVSAATALGLVPGSDIEDPKRSYVQLRSKLKKSSDATELY
                     ARIVLNAVVGNTDDHPWNTSLRQVGLGDWALSPLYDVMPFFARKGVPVFRMDITRQRP
                     SRAATRANLLAAGKHLAGLDDGAALAVIKNTLAYVRDNWRRVFCEHGKRHPGSRPDDW
                     ANVFEHDWF"
     gene            691..816
                     /locus_tag="VIC30_08135"
     CDS             691..816
                     /locus_tag="VIC30_08135"
                     /inference="COORDINATES: protein motif:HMM:NF016875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7804383.1"
                     /translation="MGNSLKGSLAGHWSVSVNANWRLTLTFDKGDAVLVDYQDYH"
     gene            824..1144
                     /locus_tag="VIC30_08140"
     CDS             824..1144
                     /locus_tag="VIC30_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011546457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEY7804384.1"
                     /translation="MKTMFNPPHPELTLRDDILPAFGLTVIEAATQFDVDRTILSKIL
                     NDRAAISLGMALRLERWLGRDNGGAAEVWLDQPRAYDLWQARQSAKSSKTLSGVNAVR
                     LQFT"
     gene            complement(1249..1532)
                     /locus_tag="VIC30_08145"
                     /pseudo
     CDS             complement(1249..1532)
                     /locus_tag="VIC30_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009520400.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
     gene            1548..1949
                     /locus_tag="VIC30_08150"
     CDS             1548..1949
                     /locus_tag="VIC30_08150"
                     /inference="COORDINATES: protein motif:HMM:NF017727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEY7804385.1"
                     /translation="MKSYLAHLKFKGSSFLLVSVGHFCSWTTDTADWSLGALHATTMG
                     FVESLTMAMITRVSYGHSGRPLQADGLMWALFLLLQAVVVLRISADITQSIGSLWLLT
                     AASTGWTLIFMVWGFRLLTWYGKPRQDNQPG"
     gene            2140..>3039
                     /locus_tag="VIC30_08155"
     CDS             2140..>3039
                     /locus_tag="VIC30_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018714790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEY7804386.1"
                     /translation="MSASLSGHTANLSNLLKLNFNLVDSLKALAQRSGVELLTLNNTT
                     LLPIVQGGMGVGVSASRLAGTTARFGAMGTISSVDLRRLHPDLWEQTRHLEKETDARE
                     LIDNANLVALDREIKKAKSLSQGNGLIAVNVMKALSAYDIYVKQALESGADAVVVGAG
                     LPLDLPDLAQDFPKAALIPILSDARGVQLVVKKWLKKNRLPSAIVLEHPRLAGGHLGA
                     AKVSDLESERFEFETAIPQIIAACREMGIEGQIPLIAAGGISSLADIKRLQSLGASAV
                     QLGTAFAVTQECDAHDNFKQVLAG"
BASE COUNT          731 a          789 c          811 g          708 t
ORIGIN      
        1 tcccggtgta tcactgcgtg agcgcagcca ccgctttagg cttggtaccg ggatcggaca
       61 tagaggatcc taagcgcagc tacgtgcaac tgcgctctaa gcttaaaaag tcatctgacg
      121 caaccgaact ctacgcgcgc atcgtgctca atgcagtggt tggcaacacc gatgaccacc
      181 cgtggaacac cagcttgcgc caagtcggtt tgggggactg ggcgctttca ccgctctacg
      241 acgtaatgcc tttttttgca cgaaaaggcg taccagtgtt tcggatggac atcaccaggc
      301 agcgcccatc gcgtgcagca acccgtgcaa acctcctggc agccggaaag cacctcgcgg
      361 gtctcgacga tggtgcggca ttagccgtca tcaagaacac actggcatac gtgcgagaca
      421 actggcgccg ggtgttctgt gagcatggca agcgtcaccc agggtctaga ccagacgact
      481 gggcaaacgt cttcgagcac gactggttct agcaaggatg taacgcaagc tatacacgcg
      541 gtgcatgcta ctcagcggcc ttgtctagac tccattctta atgctgcagt tggcaattag
      601 gatgctgaac ttgcggcaaa atagactcgt aagcatctat tgctctaaat actgccaggg
      661 aaggcgaaga catgattcgt ccaggctggg attggtaatt cattaaaagg ctcgctagct
      721 ggacattggt cggtcagtgt caatgcgaat tggcgtctga ctttgacatt tgacaaaggt
      781 gatgccgtgc ttgtcgatta tcaggactat cattgaggta cgagtgaaga ccatgtttaa
      841 cccacctcac ccagaactaa cattgcggga tgacattctt cctgccttcg gacttacggt
      901 gattgaagct gcaacccagt tcgatgttga ccgcactatc ttgtccaaga tactgaacga
      961 tcgtgcagca attagtctag ggatggcatt acgtctagaa cgctggcttg gtcgagataa
     1021 cggtggcgcc gctgaagtct ggctagacca accgagagcc tacgacctct ggcaagcgag
     1081 gcagtccgcg aaatcttcga aaaccctctc tggcgtcaac gcagttcgtc tacagtttac
     1141 ctaagcaggg aaggtagaac caaaaacccc aggcaactct agctgactgg ggtgttattt
     1201 ttgagtgagt cgcatgggac tagagcccgg gaccaacgaa tttaaaaact acagcccgcg
     1261 cgtggtggca tagaccgcgg cgtgcacacg attgctcaag ttgagcttgc gcagaatgtg
     1321 ctgcacgtga atcttgaccg tggtctcggc aatgtcgagc tcgcgggatc ggtcaagtcc
     1381 tccgtgttga tggtcttaag caggtagccc gaagcacctg ctttgaaggc agcggctaga
     1441 tcgtcgggtt tttcactgac ggtcaacatc agcacttggc actgcagggc ggttttcttt
     1501 aggccaccga tggcagcaat gcctgttaac cccagcggat cagtcctgtg aaatcatacc
     1561 tagcccactt aaaattcaaa ggaagcagtt ttttgctggt gtcagtgggc cacttctgct
     1621 cctggaccac tgacacggct gactggtcac ttggtgcctt gcatgccacc acgatgggat
     1681 ttgtggagtc gctgaccatg gctatgatca cccgcgtttc gtatggccat agtgggcggc
     1741 cgctgcaggc agacggtctg atgtgggcac tatttctatt gctgcaagct gtggtggtgt
     1801 tacgcatcag cgcagacata acgcagagca ttgggtctct gtggctgtta acagctgcca
     1861 gcacaggatg gacacttatt tttatggtct ggggctttcg gttattgacc tggtatggaa
     1921 aacccagaca agacaaccaa cctggctgag accgcatgca acaccacaca aaaacttaac
     1981 ttagttcaag acccacggtt tggcgtacat gacttttgtt tatccatcac ttgatatacc
     2041 tcaagcccaa accgacgcac aaaccgtaaa caagggtcta atcaactgat agcaaacatc
     2101 tgcatttaca tgcgaggtag cgtacacatt atgtcttcta tgtctgccag cttatctggt
     2161 cacacggcaa atctatcaaa cctattgaag ctgaacttca accttgttga cagcttaaaa
     2221 gcacttgccc aacgcagcgg tgtcgaatta ctaacgctta acaacacaac attgctgccg
     2281 atcgtgcaag gcggcatggg cgtgggcgtc tcggcgagtc gcttggctgg caccaccgca
     2341 cggtttggtg ccatgggtac catctcttct gtcgatttgc gtcgtttgca cccggatctc
     2401 tgggagcaaa cccgacatct agaaaaagaa accgatgcac gtgagttaat tgacaacgcc
     2461 aatctcgtgg cgctcgaccg ggaaatcaaa aaagccaaat ccctgtcgca aggtaatggc
     2521 ctgattgcag tcaatgtcat gaaggcgtta agtgcttatg acatctacgt caaacaagca
     2581 ctcgagagcg gtgctgatgc ggtagtcgtt ggcgcgggtt tgccactgga cctgccagat
     2641 ctagcgcaag actttcccaa ggcagcgttg attccgattc tgtcagacgc acgcggtgtg
     2701 caattggtcg tcaagaagtg gcttaaaaag aaccgactgc ccagtgccat tgttctcgaa
     2761 cacccgcgtt tggccggtgg tcacttgggt gctgccaaag tcagtgatct ggaatccgaa
     2821 cggtttgagt ttgaaactgc cattccacag atcatcgcgg cctgccgcga gatgggtatt
     2881 gaagggcaaa tcccgctgat tgccgccggt ggcatcagta gcttggctga catcaaacgg
     2941 cttcaatcct taggggcgag tgccgtacag cttggtaccg cttttgcagt cacgcaagaa
     3001 tgtgacgccc acgacaactt caaacaagtg ttggctgga
//
LOCUS       DATBNL010000466         1513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_114886, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000466 DATBNL010000000
VERSION     DATBNL010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114886"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /gene="nuoI"
                     /locus_tag="VIC30_08160"
     CDS             <1..274
                     /gene="nuoI"
                     /locus_tag="VIC30_08160"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEY7804387.1"
                     /translation="CPALAITIESALREDGTRRTTRYDIDLTKCIFCGFCEESCPVDS
                     IVETHIHEYHGEKRGDLYFTKDMLLAVGDRYETEIARNRAADAPYR"
     gene            292..912
                     /locus_tag="VIC30_08165"
     CDS             292..912
                     /locus_tag="VIC30_08165"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY7804388.1"
                     /translation="MNFTTVLFYILATVLVVAAFRVVTAKSPITAVLFLILAFANASM
                     IWMLLGAEFLSLLLVLVYVGAVMVLFLFVVMMLDVKMEALRAGMRHYLPLGLIIGGIM
                     VVEMSFVLMQSWGEIGPAAKMADDYNNTRTLGELMYTEYVYAVEVGAVILLVGMIAAI
                     SLTLRHRKDARYNNPSEAVRVRAKDRVRIVDMKSVAPVNDKPEEKA"
     gene            912..1220
                     /gene="nuoK"
                     /locus_tag="VIC30_08170"
     CDS             912..1220
                     /gene="nuoK"
                     /locus_tag="VIC30_08170"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY7804389.1"
                     /translation="MELTLSHFLVLGAILFAIGVFGIFLNRRNLIVLLMSIELMLLAV
                     NMNFVAFSTWSGDAAGQIFVFFILTVAAAEAAIGLAILVLLFRNINTINVDDLDRLKG
                     "
     gene            1295..>1513
                     /locus_tag="VIC30_08175"
     CDS             1295..>1513
                     /locus_tag="VIC30_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY7804390.1"
                     /translation="MSSVPTIYLIIVLAPLLGAIVAGLFGTGFLGKPVSRFMAHRITT
                     SLVGLSAVLSFYVLYDVAQGNTFEGTWYT"
BASE COUNT          305 a          357 c          406 g          445 t
ORIGIN      
        1 atgcccggcg ttagccatca ccatcgagtc tgccttgcgc gaggatggta cacgccgcac
       61 cacccgttat gacatcgatc taaccaagtg catcttctgt ggcttttgtg aagagagctg
      121 cccagtggac tcgatcgtcg agacacatat tcacgagtat cacggtgaga agcgtggtga
      181 cttgtatttc actaaagaca tgctcttggc tgttggcgat cgctatgaaa ccgagattgc
      241 tcgcaaccgc gctgccgatg caccttatcg ttaatggact aacgccctga catgaacttt
      301 actactgtcc ttttttatat cctggccacc gtcctcgtgg ttgcagcgtt ccgggttgtg
      361 acggctaaaa gtcctatcac ggctgttctg tttttgattc tggcgtttgc caacgcatcg
      421 atgatctgga tgctgctcgg tgcggagttc ttgtcactgt tgcttgtctt agtctacgtc
      481 ggtgcagtca tggtgttgtt cctctttgtg gtcatgatgc ttgacgtcaa gatggaagcg
      541 ttacgtgctg gtatgcgtca ctatttaccg cttggtttga ttatcggcgg catcatggtt
      601 gttgaaatgt cgttcgtctt gatgcagtca tggggtgaga ttgggcctgc ggcgaagatg
      661 gctgatgatt acaacaatac acgcacacta ggtgagctga tgtacaccga atatgtttac
      721 gccgtcgaag tcggtgccgt gattctgctt gttggtatga ttgcggccat ctcgttgaca
      781 ttgcgtcatc gcaaagacgc gcgatacaac aatccatccg aagcagtgcg cgttcgtgcc
      841 aaggaccggg tgcggatcgt cgacatgaaa tcggtcgccc cagttaacga caaacccgaa
      901 gagaaggcgt aatggaacta acactgtctc atttcttggt gcttggtgcc attttgtttg
      961 ccattggagt gttcgggatt ttcttgaacc gtcgcaacct gattgtgttg ttgatgtcca
     1021 ttgagttaat gctgttggcc gtgaacatga acttcgtggc tttctcaacg tggtcgggcg
     1081 atgccgccgg tcagatattc gttttcttta tcttgacagt agcggctgcc gaggcggcga
     1141 ttggattggc gattttggtg ttgctgtttc gaaatatcaa cacgattaac gttgatgatc
     1201 ttgaccgtct gaagggctga cctgacaggc ttgaacttac ccgtgaatgt aactagtaga
     1261 ccggtcggaa gacccactaa aagaacactt acttatgtct agcgtaccta ccatctacct
     1321 catcatcgtc ctggccccgc tgcttggtgc catcgtggcg ggcctttttg gtaccgggtt
     1381 tctgggtaag ccggttagtc gctttatggc acaccggatt acaacctcgc tagttggtct
     1441 atctgcggtg ttgtcattct atgtgttgta cgacgttgct cagggcaata catttgaagg
     1501 cacttggtac aca
//
LOCUS       DATBNL010000467         2934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_155210, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000467 DATBNL010000000
VERSION     DATBNL010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155210"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..1446
                     /locus_tag="VIC30_08180"
     CDS             283..1446
                     /locus_tag="VIC30_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY7804391.1"
                     /translation="MAKLEKQNAVVKQDETVNSRRKFFKKAGTVAAAAPLAGFPMISV
                     AQSPIVMKMQGAWGATDIFNEMAEEYVKRVNDMAGGRLRIDFLVGGSVVKPFELTDAV
                     SNGVLDAGHQVSAYWYGKTKVASLFGTGPVTGANSDQMLGWIQRGGGIELYDELLKNL
                     NLNIKGFFAFPMPPQPLGWFKQSPPKNGEEMKGYKYRTVGLATDLMQELGMSVTQLPG
                     GEIMPAMERGVIDAFEYNNPTSDRRFGAQDVAKYYSMGSFHQATEYFEIIFNKTKYDA
                     LPADLKAILQYGAEAASSSNTWTAMDNYSRDLQKLIVEDKVRVSKTPKAVYDAQLAAW
                     DKLIAQLEAEDPFFKKVYESQLAWARRVAYYGFLASADDKAAYEHVFKTKLPF"
     gene            1551..2132
                     /locus_tag="VIC30_08185"
     CDS             1551..2132
                     /locus_tag="VIC30_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008252921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY7804392.1"
                     /translation="MIGYIRWVDSLSKALGHSFGWCIVMLTLGTSYEVFMRYVLNDPT
                     SWAYDMSYMFYGALFMMAGAYTLSKNAHVRGDFLYRKWQPRTQAKVELVLYFVFFMPG
                     ILALVLTGFFYALQSASILEVSVNSPAGVPVWPLKVVIVVSGISMLLAGTAEMCRCLV
                     CIKTGQWPSRDDDVKELEEVLLETHGTDQGASK"
     gene            2129..>2934
                     /locus_tag="VIC30_08190"
     CDS             2129..>2934
                     /locus_tag="VIC30_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020656318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804393.1"
                     /translation="MSDPHVALLMLGLFICFIFLGFPIAFTLMAMGVGFGFYAYYNPA
                     LAFFDNNIFFLMVQNTFSVMSNDVLISIPLFLFMGYIIERSNILEKLFESLQVSLRHL
                     PGSMGLAALVTCALFATATGIVGAVVTLMGLLALPSMLKAGYDKKLSSGIIAAGGTLG
                     ILIPPSIMLIVYAATAGVSVVKLYAAALVPGFLLAGLYLIYIVLRVVVNPSLAPKPKD
                     ADGVTFWVGVRLLLTAFFPLAFLIVAVLGSILFGLATPSEAAAMGALGGIV"
BASE COUNT          633 a          768 c          771 g          762 t
ORIGIN      
        1 ataaatggag ctctggcata cgttcccctc tctatccaca tcaattcgaa cttcatctta
       61 agtgcactgc aacatcgcgc ggctcaatca ccctttacgt cttgcgtgaa tatcccttgg
      121 ctttataagg ggataggcgc gtttctttaa gcgaaaaccc caattgcccc aaacgccaga
      181 ccaaccgaag atgcttctgt tgttagatct acgtaagatt tagttaccaa gttgaaattg
      241 atggtttttt tattagtcaa cacacgaagg atggagacct atatggccaa gctcgaaaag
      301 caaaacgcgg tcgtcaagca ggacgaaacc gtgaactcac gacgcaagtt ctttaaaaaa
      361 gcaggtacgg ttgccgctgc tgcaccgctg gctggctttc caatgatttc tgttgctcag
      421 tcacccatcg tcatgaaaat gcagggtgcc tggggcgcaa ctgacatctt taacgagatg
      481 gccgaagagt acgtcaagcg cgtcaatgac atggctggtg gccgtttgcg cattgacttc
      541 ctggttggtg gctccgttgt caaacccttc gaattgaccg acgccgttag taacggcgta
      601 cttgatgcag gtcaccaagt atctgcgtac tggtatggta agaccaaggt cgcttcattg
      661 ttcggcacgg gtcctgtgac cggcgccaac tctgatcaga tgctaggttg gattcagcgt
      721 ggtggtggta tcgagttgta cgacgagttg ctcaagaacc tgaacctgaa cattaagggt
      781 ttcttcgcct tcccaatgcc gccgcagcca cttggttggt ttaagcagtc tcctcccaag
      841 aacggtgaag agatgaaggg ctacaagtac cgtaccgtgg gcttggcgac cgacctgatg
      901 caagagctcg gcatgagcgt gacccagctg ccaggcggcg aaatcatgcc agccatggag
      961 cgtggcgtga ttgacgcctt tgagtacaac aacccaacgt ctgaccgtcg cttcggtgct
     1021 caagacgtgg ccaagtacta ctcaatgggc tcattccacc aggcaactga gtactttgaa
     1081 atcattttta acaagaccaa gtacgacgca ttgcctgctg accttaaggc gattttgcag
     1141 tacggtgctg aggctgcctc ttcgtccaac acatggacgg cgatggacaa ctactcacgt
     1201 gacctgcaaa agctgatcgt cgaagacaag gttcgtgtca gcaagacacc caaagccgtc
     1261 tatgacgcac agttggctgc ttgggacaaa ctcatcgctc aactcgaggc cgaggacccc
     1321 ttcttcaaga aggtctatga atcgcagctc gcttgggcac gccgcgtggc ctactacggc
     1381 ttcttggcat cagctgatga caaagctgct tacgagcacg tcttcaagac aaagctgcca
     1441 ttctaaggat atgatgcagc ctttggttgg gcctcgcgcc caaccaatcc ttagtttcag
     1501 gaaagaccgc tgctttgccg gcggtttttt ttaattgcgg agattgacac atgatcgggt
     1561 atatccgatg ggtagatagc ctctcaaaag cactgggcca ctcttttggc tggtgcattg
     1621 tgatgctgac gcttggaacg agctatgaag tatttatgcg ctacgtccta aacgacccaa
     1681 cctcttgggc ctatgacatg agctacatgt tttacggtgc cttatttatg atggccggcg
     1741 cctatacctt gtctaagaat gcccacgtcc gaggtgactt tctttaccgc aaatggcaac
     1801 cacgcaccca agccaaagtc gagctggtgc tgtacttcgt gttttttatg ccaggtattt
     1861 tggcattggt tctcaccggc ttcttctacg cattgcagtc cgcaagcatt ttggaggtca
     1921 gtgtcaatag cccagccggt gtgccggtct ggccgctcaa agtggtgatc gtggtgtctg
     1981 gcatcagcat gctgttggct ggcaccgctg agatgtgccg ctgcctcgtg tgcatcaaaa
     2041 caggtcaatg gcctagccgc gacgatgatg tcaaagaact cgaagaagtc ttgcttgaaa
     2101 cccatggcac cgatcaagga gcgtccaaat gagtgaccca cacgtcgcgc tcctgatgct
     2161 ggggctattt atctgtttta ttttcctggg tttccccatt gcctttacgt tgatggccat
     2221 gggtgttggg tttggcttct acgcctacta caaccccgct ctggcatttt ttgacaacaa
     2281 catctttttc ttgatggtgc aaaacacgtt cagcgtgatg agtaacgacg tgctcatttc
     2341 gataccgctg ttcctgttca tgggctacat catcgaacga tccaacatcc tggaaaagct
     2401 ttttgagagc ctgcaggtat cactgcgtca cctgcccggt tcgatgggtt tagccgcact
     2461 ggtaacctgc gcgctgtttg ccacggccac cggtattgtg ggtgctgtgg tgacgctcat
     2521 gggcctgctg gcgttacctt ctatgctcaa ggccggttac gacaaaaagc tctcaagcgg
     2581 catcattgcc gctggcggca cgctggggat tttgattccg ccgtccatca tgctgattgt
     2641 ctacgcggcc acagccggcg tatcggtggt taagctctat gccgccgcgc tagttcccgg
     2701 ctttttgctc gccggcctgt atttgatcta tatcgtgtta cgggtggtcg tgaacccgag
     2761 tctggcaccc aaaccaaaag acgccgatgg cgtaacattc tgggtcggcg tcagactgtt
     2821 gttgacggct tttttcccgt tggcgttttt gatcgtcgcg gtgctgggct cgattttgtt
     2881 tggcttggcc acaccaagcg aggccgctgc catgggtgca ttgggcggca ttgt
//
LOCUS       DATBNL010000468         2861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_114900, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000468 DATBNL010000000
VERSION     DATBNL010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114900"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VIC30_08195"
     CDS             <1..203
                     /locus_tag="VIC30_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HEY7804394.1"
                     /translation="ALEVVGVIEVVNTWQSHFDAAGVSVADIESLQQRIDGDVLLSQR
                     AQFDPERFSNVPKKKSTKSPFS"
     gene            complement(255..908)
                     /locus_tag="VIC30_08200"
     CDS             complement(255..908)
                     /locus_tag="VIC30_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019656161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease"
                     /protein_id="HEY7804395.1"
                     /translation="MNTATNPTDTNTDSDTAKPPEVYFSVDIEADGPIPGVNSMLSLG
                     CAAFDPDGRALGTYSANLKTLPEATPDPKTMAWWATQPKAWEACQQDQREAAEVMPEF
                     AKWVWAIAGENVKPVFAAWPVGFDFTYVYWYLIRFHGHSPFSHHALDIRSFAMAYMNL
                     TYRGSHKSKLKKRLKDRLNLTHQHDHIAVHDAIEQGELLVALLAANPDLHAKHTGSD"
     gene            complement(941..2275)
                     /locus_tag="VIC30_08205"
     CDS             complement(941..2275)
                     /locus_tag="VIC30_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019427831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAF domain-containing protein"
                     /protein_id="HEY7804396.1"
                     /translation="MNLYAKLQARAADNNPIRIGVIGAGKFASMYLAQVPNTPGIHLV
                     GIADLSPENARRNLARVGWKPEQYDAGSLEQALANGNTHVGDDWLALVKNPAIDVIVE
                     ATGSPIAAVDHCLGAFANGKHVVNVTVEADALCGPMLGKRARDAGVVYSLAYGDQPAL
                     VCDLVDWARAAGFNVVSAGRGHKWLPHFAQSTPDTVWDNWGLTAQEAERGGLNPKMFN
                     SFLDGSKPAIESTAICNATGLVAPPNGLTYPPASVDDIPFVCRPIDEGGVLHQKGQVE
                     VVSSLERDGRVIPYDIRMGVFVVFEGDTDYIRNCFSEYKVRTDPSGRYACLYKRWHLI
                     GLEVGISVASVGLRGESTGSPICLNADVAATAKRDLAVGEMLDGEGGYTVVGSLFQAQ
                     QSKAINALPLGLAHNLKVTRPVKAGQHLSWDDVAADTSLAAYQLRAEMMSTL"
BASE COUNT          643 a          774 c          769 g          675 t
ORIGIN      
        1 ctgcactcga ggtggtgggt gtcattgagg tggtcaatac ctggcaaagc cactttgatg
       61 cggctggagt cagcgttgcg gatattgaat ctctgcagca acgtattgat ggcgatgtgt
      121 tgttgtctca gcgcgcgcag tttgatccag aacgttttag caacgtgccc aagaagaaat
      181 caacaaaaag cccattcagt tgactgcctc cccacctaca tggacgggtc tttacgcgct
      241 ggatgggtaa ccactcaatc tgatccagta tgtttcgcgt gcaaatccgg attcgccgcc
      301 aaaagcgcaa ctagcaattc gccttgctca atggcatcgt gcacggcgat gtgatcatgt
      361 tgatgggtca ggttcaagcg atctttcagt cgctttttta gttttgattt atgtgaacct
      421 cggtaggtca ggttcatgta tgccatggcg aaacttcgga tgtctagcgc atggtggcta
      481 aatgggctgt gaccatgaaa ccgaatcaga taccagtaca cgtaagtgaa gtcaaagccg
      541 accggccaag cggcaaacac gggcttgacg ttctcaccgg cgattgccca tacccatttg
      601 gcaaactcag gcatgacctc agccgcctcg cgttggtctt gctggcaagc ttcccacgcc
      661 ttgggttgtg ttgcccacca cgccatggtt ttagggtcag gcgtggcctc gggcaaggtt
      721 tttaggttgg cactgtacgt acccaaggca cgaccgtcag gatcaaacgc tgcacaaccg
      781 agcgacagca tggagttgac cccagggatg gggccatcgg cctcgatgtc gacactaaag
      841 tacacctcgg gaggtttggc agtgtcgcta tcggtattgg tgtcggtggg gttggtagca
      901 gtgttcaaac ggattccaaa tgattaaacg gcgagcgatt ttaaagcgtg ctcatcattt
      961 cagcacgtag ctggtaggcg gctaagctcg tgtcagcggc gacatcgtcc cagcttaagt
     1021 gttgaccggc tttgactggg cgcgtgactt taaggttatg cgccagtcct aagggcaggg
     1081 cgttgatggc tttggattgc tgtgcctgaa acaaactgcc caccacggta taaccacctt
     1141 cgccatcaag catttcaccc acggcaagat cgcgcttggc agtggccgcc acatcggcat
     1201 tcagacaaat cggtgaaccg gtggactcac cacgcagacc cacggatgcg actgaaatac
     1261 cgacttccag accaatcaaa tgccaacgct tgtacaagca agcgtagcga ccactcggat
     1321 cggtgcgtac cttgtattcg ctaaagcagt tacggatgta gtcggtgtca ccttcgaaca
     1381 ccacaaacac acccatgcgg atgtcatatg gaatcacccg gccatcgcgc tctagcgatg
     1441 acacgacttc aacttgtccc ttttgatgga gaacgccacc ttcgtcgatc gggcggcaga
     1501 caaacgggat gtcatcaaca ctggccggtg ggtaggtcag accgttcggt ggtgccacca
     1561 gtccagtggc attgcaaatc gccgtggatt caatcgccgg tttggagcca tcgagaaacg
     1621 agttaaacat cttggggttt aaaccgccac gctcagcttc ttgtgcggtc agtccccagt
     1681 tgtcccaaac tgtgtcaggc gttgattgcg caaaatgtgg cagccacttg tggccacgac
     1741 cggctgacac cacattaaag ccagccgcgc gcgcccagtc cacgaggtcg cacaccagtg
     1801 cgggctgatc accataggca aggctataga ccacaccagc atcgcgcgcg cgcttaccca
     1861 acatcggccc gcacagcgca tcggcttcaa ctgtgacatt gaccacatgt ttgccattgg
     1921 caaaggcgcc taagcagtga tcgaccgcag caatgggtga gccggtggct tcaacaatca
     1981 cgtcaatggc cgggttcttg accaaagcca gccaatcgtc accgacatgg gtgttgccat
     2041 tggccagtgc ttgctccaaa gaccccgcgt cgtattgctc gggcttccag cccacacgag
     2101 ccaggttgcg acgggcgttc tcaggcgaca gatcggcgat gccaaccaga tgaatgccag
     2161 gtgtgttggg gacttgagcc agatacatcg aagcgaattt gccagcgccg atgacgccaa
     2221 tgcgaatcgg gttgttgtcg gccgcgcgtg cttgcagttt ggcgtataag ttcatgtcag
     2281 tcccctgtgt ttggtttgtg gtttgtgtgg ttgtgtagtt gtgttggttt gatccttgtt
     2341 tacccgattc taagctttgg cgcgctctgg tggcgttgac tcgattgatg ttcgattgat
     2401 gtcactgacg gctagccgtg aaagtcgtgt ttctcaaaaa cgatgcacgc gcaatgcctt
     2461 tgtcgctgct aaaacatcgt atcgggcagc gtttgccttg ttcccagttg cgaactgtgt
     2521 caatagaaac gtggattctc tgctcaaaca tcgcctgatt attgctcaag tcgaattaaa
     2581 tttccaaatt gacaattata aagctgatgt atatcgtgac gggcttgttc cacaagacgc
     2641 ttcaatccct tcatgacccc aaattttgat caaccgttac cagatgcttg tccgcccgag
     2701 tcggcgacta gacgccaaca acccgcctat cgaatcgtac gaggcgaccc tccctccaaa
     2761 acggacttca aaactcacgc cgaacttggg ctagctttgt ctgcggacga atgcagacga
     2821 gcatctctct cgattttcgc gacgtaccgc caagcggctc a
//
LOCUS       DATBNL010000469         3326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_174702, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000469 DATBNL010000000
VERSION     DATBNL010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3326
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174702"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1167
                     /locus_tag="VIC30_08210"
     CDS             <1..1167
                     /locus_tag="VIC30_08210"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011351217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7804397.1"
                     /translation="LTRALAGPFATMALADLGADVIKIEPTPKGDMIRQWGPFDGGTS
                     VYYLSANRNKRCVGINFRSEQGMDLIREMILRADIVVENFKVGTMQAMGLDFESLSEK
                     NPRLIMASISGFGDHGPAKRWPGFDQIAQGYSGLMSVTGTPDTGATRVGIPVGDMTAG
                     LWMTVGVVSAVVQRTQTGRGQHVKTSLLSSLLSLLSVQGQRYLSLGEVPAPMGNAHPV
                     IFPYGSFMAADGLMNIAPATTAMWEKVCELLGLAHLVNDARYLTNADRVRNRQGLQQA
                     FDHALSTKSRAYWTELLLANGVPAGPINTIADAMDDQQVKAMHMVENIEYPELGDVRH
                     VGLPVNMASIPDGQSVYAPAPEFGQHSIEVLREFGWDESQINDLVQGQIIFQQT"
     gene            1172..1942
                     /locus_tag="VIC30_08215"
     CDS             1172..1942
                     /locus_tag="VIC30_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011295731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY7804398.1"
                     /translation="MDTDINQAPALEINGKVATIRLLRPHVANRLSADDLLCIQQHVH
                     SVNAKPEIMVLKFESTGKYFCSGYDLKSFGQGQTPSSLLFGETVDLVEAARPITIAAV
                     NGGVFGGGTDLVLSCDFRIGVHGASMFMPAAKLGLHFYPGGLVRYLTRLGVDQAKRLF
                     LTAEKIDSAQMLKIGFLTDLVEPQQLQARTTELTETLCAMAPLAALGIKKHLNLIARG
                     QVLSEEIAQAVKLTEASEDLQEGAAAWRDKRLAQFKGR"
     gene            complement(1970..2572)
                     /locus_tag="VIC30_08220"
     CDS             complement(1970..2572)
                     /locus_tag="VIC30_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007866589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY7804399.1"
                     /translation="MSTVNIPLFPLSSPLFPDSRMPLRIFEVRYLHMIKQCQKDNEPF
                     GVVALRAGTEAQRAGVEESTHSIGCLAHLTDVVEVQPGLLMIDSTGGKRFHIQANERG
                     AYGLWHGKVQLLDEDMAVDIPPDLQPLADKLGSLIADAQKQGMEQQLPLTRPYRLDEC
                     GWVANQWATLLNIDTVVKVDLLTEDDPLARLTKVKLLLSA"
BASE COUNT          713 a          846 c          957 g          810 t
ORIGIN      
        1 ctgacgcgtg cgctagctgg accatttgcc accatggcac tggccgattt aggcgccgat
       61 gtcatcaaga ttgaaccgac gcccaaaggt gacatgatcc gacagtgggg cccctttgat
      121 gggggtacca gtgtctatta cctcagtgcc aatcgcaata aacgctgcgt tggaatcaac
      181 ttccgcagtg aacaaggcat ggatctcatc cgcgagatga ttctgcgtgc cgacatcgtc
      241 gtggagaatt tcaaagtggg caccatgcaa gccatgggcc tggattttga gtcgcttagt
      301 gaaaaaaatc cgcgtctgat catggcgtcg atctcggggt ttggtgacca cgggccggcc
      361 aagcgttggc caggctttga tcaaattgca caaggctatt cgggcttgat gagcgtgact
      421 ggcacacccg acacgggtgc cacccgtgtg ggtattccgg ttggtgacat gacggctggt
      481 ctttggatga cggttggtgt ggtgtcagcc gtggtgcaaa gaacgcaaac tggccgtggg
      541 caacacgtca agacctcgtt gctctcgagt ctgttaagtt tgcttagcgt tcaaggtcag
      601 cgctatctaa gcttgggcga ggtgcctgcc cccatgggca atgcgcaccc agtgatcttt
      661 ccttatggca gtttcatggc cgccgacggg ttgatgaaca tcgcgccggc gaccacggcg
      721 atgtgggaaa aagtctgtga attgctcggc cttgcgcatc tggtaaacga tgctcgctat
      781 ctgaccaacg ctgaccgggt gcgtaaccgc caaggactac aacaggcatt cgaccacgct
      841 ttgagcacca agtcacgagc gtactggacc gagttgttgc ttgccaatgg cgtgcctgct
      901 gggccgatca acaccatcgc cgatgccatg gatgaccagc aggtcaaagc catgcacatg
      961 gtcgagaaca ttgagtaccc tgaattagga gatgtgcgtc atgttggtct gccggttaac
     1021 atggcgtcca tcccggatgg tcaaagcgtg tatgcgcctg caccggaatt cggtcaacac
     1081 agcatcgagg tattgcgcga gtttggctgg gatgaatcgc agataaacga cttggtgcag
     1141 ggtcagataa tttttcagca gacataggtt catggatacc gatatcaacc aagcccccgc
     1201 cctcgagatc aatggcaagg tcgctaccat tcgcctgttg cgcccgcatg tggccaatcg
     1261 gctgtcggca gatgatttgt tgtgcattca gcaacatgtg cacagcgtta atgccaagcc
     1321 cgagatcatg gtgctgaaat ttgaaagtac cggcaagtat ttctgtagcg gctatgacct
     1381 caagtccttt ggtcaaggtc aaacgcctag ttcattgttg tttggcgaaa ccgttgacct
     1441 cgtggaggcg gcccgcccaa ttaccattgc ggcggtcaac ggcggggtgt ttggcggtgg
     1501 caccgacctt gtgctgtcgt gtgactttcg gattggcgtt catggcgcat caatgttcat
     1561 gccagcggcc aaactcggct tacatttcta ccctggcggt ctggtgcggt acctgacgcg
     1621 gttgggcgtg gatcaagcga agcggttatt tctgaccgct gaaaaaatcg actcggctca
     1681 gatgttgaag atcgggtttc tgacggactt ggttgagccg cagcaactgc aggcgcgcac
     1741 cacagagttg accgagacgc tctgtgccat ggcgccgctt gctgcactgg gtattaaaaa
     1801 acacttgaat ctgattgccc gcggtcaagt gctatcagaa gagattgcgc aggcagtcaa
     1861 gctcaccgaa gcctctgagg atctgcaaga gggtgcggcg gcctggcgtg acaagcgtct
     1921 ggcacaattc aagggccgtt agatttgggc cacgttaacc cacgttaact taagcgctta
     1981 agagcaactt caccttggtg agtctggcca atggatcatc ttcggtcagt aggtcaacct
     2041 taaccaccgt atctatgttt aacagcgtgg cccattgatt agcgacccat ccacattcgt
     2101 ctagccgata gggccgggtt aacggcagtt gttgttccat gccttgcttt tgggcatcgg
     2161 caatcagtga gccaagtttg tccgctagcg gctgcaagtc aggtgggata tcaactgcca
     2221 tgtcttcatc gagtaattgc actttgccat gccatagacc ataggcacca cgctcattgg
     2281 cttgaatatg aaaccgcttg ccaccggtgc tgtcgatcat gagcaatccg ggttgtactt
     2341 cgaccacgtc agtcagatgc gctaaacaac caatggaatg ggtcgattcc tcaacgccgg
     2401 cgcgttgtgc ttctgtgcca gcacgcaagg cgaccacacc aaagggctca ttgtcctttt
     2461 ggcattgttt gatcatgtgc aggtaacgca cctcaaaaat gcgcaagggc atgcggctgt
     2521 ctggaaacag cggcgaagaa agcgggaaaa gcgggatgtt gacagtggac aatcaaaaaa
     2581 ctccgtgatg aacgccgtga tgaactccgt ggaattcgat ctattgcggg tacaaactgg
     2641 catcgcagat aaagtatcac aatgccagtg ctcgctggtt taagggctgg ttttagggct
     2701 tgcttttgct gcgtttgcca cttacaccag tgtcctcttt ttttctgagg aacttgctgt
     2761 ctccgagggg ggcggctgcg ttttggtgca accatatcag tggcagctgg tgtcggctgc
     2821 tcgcgcatga cacttgatag caggttgagt tcagacgggt tggccagtaa ctagcgggca
     2881 tgatggcgca ttcatgccac cattgctggc ttgccgcagt attaaggctc gcggtttcgg
     2941 cttagtgtcg tttggcgcca ttcggttgac agatgctagc ccataagatg tctcattgat
     3001 atcttaccgt tcagcgcgta aagccccgtt cttcaggacg gggatgtaag cgcgggcgta
     3061 gccagtgcag tgcgtcagtt tttgggggtt tatgtcatcc tgacctgtca aggcaaagta
     3121 gaaatgtccg gtagttgggc aagttagaaa tgtccggttc ctataactct atccctctca
     3181 gctcaggggc tggccatatg gccagcccca gagctggcgg gctttctggt gctgctccaa
     3241 gggtcggttt gaaccttttt gggctttccc gcaccccgac gcctctggat gacattgtcc
     3301 acacgggtgt tcaaggtctt gtcatc
//
LOCUS       DATBNL010000470         1996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_5189, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000470 DATBNL010000000
VERSION     DATBNL010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5189"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VIC30_08225"
     CDS             complement(<1..722)
                     /locus_tag="VIC30_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7804400.1"
                     /translation="MFRHSLDPLFQPQSLLIVSDNPLPVFQALPSDMAKRTTRVDTTP
                     GTAPEFPETLAGVAAGSRLDLAVVCMPPLMLPDVLANLEAYRPMALIVLAHEVIDPDP
                     ARTRILCSQWAQTHRCALLGPFSFGLQRPHRGLNLSQHPLLAHPGRAALVAQSRTIMA
                     GVLDWADDVHIGFSAAIALGQESVTRLPAVLDYLATDPRTDSIALYLDEVDNGREFMS
                     ALRAAASVKPVVVLKTGTALESR"
     gene            1070..>1996
                     /gene="gltX"
                     /locus_tag="VIC30_08230"
     CDS             1070..>1996
                     /gene="gltX"
                     /locus_tag="VIC30_08230"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEY7804401.1"
                     /translation="MNQPSDQVRRVRTRFAPSPTGFLHLGGARTALFSWAYAKHFEGD
                     FVLRIEDTDLERSTPEAVQAILDGMAWLGFAPDEGPYYQMQRIDRYREVIAQMVEAGT
                     AYHCYSTPEEVDAMREAAKARGAKPRYDGTWRPEPGKTLPPAPEGRKPVVRFKNPLSG
                     VTVWEDLVKGTISIRNEELDDLIIARTDGTPTYNFCVVVDDWDMEITHVIRGDDHVNN
                     TPRQINILKALGAPVPAYGHVPMILGPDGQKLSKRHGAVNVMAYDDQGYLPEAMVNYL
                     ARLGWSHADEEIFNREQLVQWFDGQNLSRSAAQ"
BASE COUNT          492 a          568 c          545 g          391 t
ORIGIN      
        1 cgcgactcca aagccgtgcc ggtcttgagc accacgacag gcttgacact ggcggcggcg
       61 cgcagcgcgc tcataaactc tcgaccatta tcgacctcat caaggtagag cgcgatgctg
      121 tcggtgcgtg gatcggtagc caaatagtcc aacacagcgg gcaatcgggt caccgactcc
      181 tgaccaagtg cgatggcggc tgagaaacca atgtgcacat cgtcggccca gtccaacaca
      241 cccgccatga tcgtgcgcga ctgcgccacc agcgctgcgc gccccgggtg ggccagcaag
      301 gggtgttgac ttaagttcag accacggtgc gggcgttgca aaccaaatga gaaaggaccc
      361 aacaaggcgc accggtgggt ttgcgcccat tggctacaaa gtatccgggt acgagccgga
      421 tctgggtcaa tgacctcgtg cgccaagacg atcagcgcca tgggccgata ggcctctaaa
      481 ttagctagta cgtcgggtag catcagcggt ggcatgcaga ccaccgccaa atcaagacgc
      541 gagcccgcag ccacaccggc caaggtctcg ggaaactcag gcgccgtgcc gggcgttgtg
      601 tctacgcgcg tggtgcgctt ggccatgtct gaaggcagcg cttggaacac cggcaacgga
      661 ttgtcactga caatcagcaa actttgcggt tgaaacaacg gatcaagact gtgacgaaac
      721 atggtccact ccaacggcag ccagaatttc attctgcctc taaaatgtgt cgggtgtgct
      781 aacgatggct aataaatggg tatcaatcat atgttgcacc gcaacatatg aaacgtcaag
      841 cgttcgtcag cccgaagtca gggacgagat tggtggtttt taatacaaaa gaaagcgtta
      901 acaatggctc aaacggggga ctacgccttt ggcaatctca tcaatcaccc tcgaaatgac
      961 acgagtaaaa aataaaccgt gaaccactgc acatccttgc gaaatgtggc gcaaaagcga
     1021 ctatcgctac acttttccca gctaacccaa tcaaagagct ctgtttgcca tgaatcaacc
     1081 ctccgaccaa gtacgccgtg ttcgtacccg tttcgccccc tcaccgacag gttttttaca
     1141 tttgggcggt gcacgcaccg ctttgtttag ctgggcttat gccaaacact ttgagggtga
     1201 cttcgttcta cgcatcgaag acacggatct cgagcgctca acgccagaag ctgtacaggc
     1261 aattctcgat ggcatggcat ggctgggttt tgcgcctgac gagggcccgt actaccaaat
     1321 gcagcgcatt gaccgctacc gcgaagtaat tgcacagatg gtcgaggctg gtacggccta
     1381 ccattgctac agcacccccg aagaagtcga tgccatgcgc gaagcagcca aggcccgtgg
     1441 tgccaaacct cgctacgacg gcacctggcg cccggagccc ggtaagacat tgccgcccgc
     1501 acccgaaggt cgcaagccgg tggttcggtt taaaaatccg ctcagcggcg taacggtctg
     1561 ggaagacttg gtcaaaggca ccattagcat tcgcaacgaa gagctcgatg acctaatcat
     1621 cgcccgcaca gatggcacac ccacctacaa cttctgcgtg gtggtcgatg actgggacat
     1681 ggaaattacc catgtcatac gtggtgacga tcacgtcaac aatacaccgc gtcaaattaa
     1741 tatcctcaaa gcacttgggg caccggtacc cgcgtacggc catgtgccga tgattctggg
     1801 tccagacggg cagaagctgt ctaaacgcca tggcgcagtc aatgtcatgg cttacgatga
     1861 tcaagggtac ctgccagaag ccatggtcaa ttacctggct cggttaggct ggagccatgc
     1921 tgacgaggaa atttttaatc gcgagcagct ggttcagtgg tttgatggac agaacctctc
     1981 acgctcggcg gctcag
//
LOCUS       DATBNL010000471         3926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_125189, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000471 DATBNL010000000
VERSION     DATBNL010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3926
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125189"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VIC30_08235"
     CDS             <1..413
                     /locus_tag="VIC30_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009519487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY7804402.1"
                     /translation="MIMVAADSDITGSADLDGKSLAIKTGTSAADYAKANFTGTELRQ
                     FPNVDNAYLELVTGRVDAAMHDTPNVLYFANTAGKGKVKVVGEQMMAHEYGIGFPKGS
                     ELVPQVNQALANMKQDGRYDAIYEKWFGTLPPSK"
     gene            469..1125
                     /gene="glnP"
                     /locus_tag="VIC30_08240"
     CDS             469..1125
                     /gene="glnP"
                     /locus_tag="VIC30_08240"
                     /EC_number="7.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008921769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HEY7804403.1"
                     /translation="MEFDFSVIIDALPSLFKGAQLTLFITVVGLVGGSLVGLIFGLMR
                     AYGNKLINSIAFVYIEVVRGTPIVVQVMFIYFALPVIADIRVDPITAAVTSIIVNAGA
                     YIAEIVRGAFLSVPRGLKEAGLALGMPVWRVLAFVVGPVAFRRMTPPLGNQFIVSLKD
                     TSLFIVIGVGELTRQGQEIMAANFRAVEIWSAVAIFYLVMIGVLTFALRVVENRMRIL
                     "
     gene            1128..1850
                     /gene="glnQ"
                     /locus_tag="VIC30_08245"
     CDS             1128..1850
                     /gene="glnQ"
                     /locus_tag="VIC30_08245"
                     /EC_number="7.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020067647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_process: GO:0003333 - amino acid transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HEY7804404.1"
                     /translation="MVEFKNVSKRFGSTVVLDGVDLEIEAGEVVVLIGPSGSGKSTLL
                     RCINALETIDGGDLLVDGLSVRGSKATVREIRQEAGMVFQQFNLFPQMTALQNVAFGP
                     QQVRRTSKAQAEQEAMALLEKVGLLERKDHYPNELSGGQQQRVAIARALAIRPKLMLF
                     DEPTSALDPELRQEVLRVMQDLAEEGMTMIVVTHEISFARKVGTRLIFMEHGHIAVDG
                     APNELIDQASNPRLRDFLQHVG"
     gene            1850..2917
                     /locus_tag="VIC30_08250"
     CDS             1850..2917
                     /locus_tag="VIC30_08250"
                     /inference="COORDINATES: protein motif:HMM:NF040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C45 family peptidase"
                     /protein_id="HEY7804405.1"
                     /translation="MMLSFLQLNGSHHDVGVALGQFGAQALHHYAKTSPAWQHVMAFR
                     DHSLVKHMQQHVQAQHPDYWAELQGLAQGLEMPLADVFTWNCRGDLWAWAPDGCTTIQ
                     KPGAPNRLAHNEDGDPLFAGYCAMVHIQTESDPGFTAFVYPGSLPGHTFGANAAGLCM
                     TVNNLRTLHAQAGLPRMVVTRAMIGMPNLADALRYVQSVKPAGGFHVTLGQANQRHLV
                     SVEFSHRQCSVVELNKASGHANHMIHAAMQHQPQIVTGSSGFRQIRLEQCLQAHADIE
                     PLEILFDTQTAEFPVFRADPADPDQENTLASARFEVGTDALQWQVHQGQCFEPVYRFK
                     NDQLMTPDVKATNACNMATNP"
     gene            2893..3810
                     /locus_tag="VIC30_08255"
     CDS             2893..3810
                     /locus_tag="VIC30_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009519492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEY7804406.1"
                     /translation="MQHGNQPVARNLDELKSLIVAINRGQASITLGSKTLQVLGALVQ
                     KPHDVALHSISEVARGVGVNASTLTRLAARLGFSGYSEFQAIFKQSITASTPFYSEQG
                     KRLLGNQSQGPTDKASQTLETVAQDSVRNIQTMLAALDSRTLIKTARRLARARRVSLY
                     GLRQFHGIASYLTYGLSLVRPDVSLLDASALGVAEGLSSMTSQDVLVVTSVAPYTRAV
                     VDVAKAAHDTGIDVIALTDSLTSPLVAHAAFAFEIPHEGSYISNSLGAYLVFCEGLVN
                     LVAKELGTKGLACLEQREAMIERLKIETP"
BASE COUNT          899 a         1088 c         1054 g          885 t
ORIGIN      
        1 tcatgatcat ggtggctgca gatagcgaca tcaccggctc ggctgatctt gacggtaaaa
       61 gcctcgccat taaaaccgga acgtcagcgg ccgactacgc caaggcaaac ttcaccggca
      121 ctgagttgcg ccagtttccc aacgttgaca acgcctatct cgagttagtc acgggtcgcg
      181 tcgatgctgc catgcacgac acccccaatg tgctgtactt cgctaacacc gccggtaaag
      241 gcaaagtcaa agtcgtgggt gagcaaatga tggcacacga atatggcatc ggtttcccca
      301 aaggcagcga actcgtaccg caagttaatc aagcactggc caacatgaag caagacgggc
      361 gctatgacgc catttacgag aagtggtttg gcacgctgcc gccttcgaaa taatcagtcc
      421 ccgtcttaaa caggctaaac cctttactga agctgcagga accccaccat ggaatttgat
      481 ttttccgtca tcatcgatgc cctgccgtcc ttatttaagg gcgcgcaatt gacgctgttc
      541 attaccgtgg tcggtttggt gggtggcagc ttggtggggc tgatcttcgg gctgatgcga
      601 gcctatggca acaagctgat taacagcatt gcctttgtgt atatcgaagt ggttcgtggc
      661 acaccgattg tggtgcaagt catgttcatt tactttgcgc tgccggtgat tgccgacatt
      721 cgggtcgacc caatcaccgc agcggtcacc tcaattatcg tgaacgcggg cgcgtacatc
      781 gctgaaatcg ttcgcggcgc gtttttatcc gtacctaggg ggctcaaaga ggccggccta
      841 gcccttggca tgccggtctg gcgggtgctg gcgtttgtgg ttggtccggt ggcatttcgt
      901 cgcatgaccc caccattagg caaccagttc atcgtcagct tgaaagacac ttcgctcttt
      961 atcgtcattg gtgtgggtga actcacccgg caaggacagg aaatcatggc agcaaacttc
     1021 agagccgttg agatctggag tgccgtggcg attttttatc tggtcatgat tggtgtactg
     1081 acctttgccc ttcgagttgt agaaaatagg atgcgcattc tgtgaagatg gtcgaattta
     1141 aaaacgtcag caaacgcttt ggcagcaccg ttgtgctcga tggcgttgat ctggagatcg
     1201 aagctggcga agtcgtggta cttattggtc cgtctggctc tggcaaatcg acgctgctgc
     1261 gttgtatcaa tgcgcttgag accattgatg gtggcgactt attggttgac ggtttaagcg
     1321 tgcgcggcag caaggccacg gtgcgtgaaa tccgccaaga agccggcatg gtgtttcagc
     1381 aattcaatct gttcccacag atgaccgccc tacaaaacgt ggcatttggt ccacaacaag
     1441 tgcgtcgcac atctaaggca caagccgaac aagaggccat ggccttgctt gagaaagttg
     1501 gtttgcttga acgcaaggat cactatccca acgaactatc gggcgggcaa cagcagcggg
     1561 tggccattgc ccgcgcgctc gcgatacgcc ccaaactcat gctgtttgat gagcctacct
     1621 cagcgctcga ccctgaattg cgtcaagagg tgctgcgcgt gatgcaggac ttggctgaag
     1681 aaggtatgac aatgatcgtg gtcactcacg aaatcagctt tgcccgcaag gtgggcacgc
     1741 gcctgatttt tatggaacac gggcacattg ctgttgacgg cgcgccaaac gaattgattg
     1801 accaagccag caacccgcgg ttgcgagact ttttgcagca cgtggggtaa tgatgctgag
     1861 cttcctacaa cttaacggca gccaccacga tgtcggtgtg gcgcttggac aattcggtgc
     1921 gcaggcccta caccactacg ctaaaaccag ccctgcctgg caacacgtca tggcgtttcg
     1981 tgaccactcg ttggtcaagc acatgcaaca acacgtccaa gctcaacatc cagactattg
     2041 ggctgaactc caagggctag cacaaggcct ggagatgcct ctggccgatg tgttcacatg
     2101 gaattgccgc ggagacctct gggcctgggc acccgatggg tgcaccacca ttcagaagcc
     2161 tggcgcgccc aaccggttgg cccacaacga ggatggcgac cctttgtttg ctggttactg
     2221 tgccatggtg catatacaaa ccgagagcga tcctggtttc acggcctttg tttatccggg
     2281 atcattgcca ggccacacct tcggagccaa cgccgcgggt ttatgcatga cggttaataa
     2341 cttacgaaca ctacatgcgc aggcgggctt gccacgtatg gtcgtcaccc gtgccatgat
     2401 aggtatgcca aacttggccg atgccctgcg ctacgtgcaa tcggtcaagc ccgccggtgg
     2461 attccatgtc acgctcggtc aagccaacca acgccatctc gtgagtgttg agttcagtca
     2521 tcgtcagtgt tcggtcgttg aactgaacaa agcatcaggc catgccaatc atatgattca
     2581 tgccgccatg caacatcagc cacaaatcgt cacggggtct tccgggtttc gtcagattcg
     2641 gctcgaacaa tgcttgcaag cccatgctga tatcgaacct ttagagatat tgtttgacac
     2701 ccaaaccgcc gagttcccgg tttttagggc tgacccagcg gatcctgacc aagagaacac
     2761 cttagccagt gcgcgctttg aggtaggaac agatgcgcta cagtggcaag tgcaccaagg
     2821 tcagtgtttt gagccggttt acaggtttaa gaatgaccag ctcatgaccc ctgacgtgaa
     2881 agcaaccaac gcatgcaaca tggcaaccaa cccgtagctc gaaacctcga tgaactcaaa
     2941 tcgctcatcg tggcgatcaa tcgtggacaa gccagtatca cacttggcag taaaacgctg
     3001 caagtgctcg gcgcactcgt acaaaagcca cacgacgttg cgctgcactc gatttccgaa
     3061 gttgcccgtg gcgttggtgt caacgcatcc acactgacac gcttggctgc ccgcctgggc
     3121 tttagcggtt acagcgagtt tcaagcgatt tttaagcaaa gcatcacagc gagcacaccc
     3181 ttctattccg agcagggcaa gcgcttgctc ggcaatcaat cccaaggccc gacggacaag
     3241 gccagccaga cactagagac cgtggctcaa gactctgtgc gcaacattca gaccatgctc
     3301 gccgcactgg actcacgcac cctgattaaa accgcgcggc gtttggcacg tgccagacgc
     3361 gtctccctct acggtttaag acagtttcat ggtattgcca gttatctgac ctacggtcta
     3421 agtctggtcc ggccggatgt gagcttgctc gatgccagcg cactcggcgt ggccgagggg
     3481 ctttcatcaa tgacctcaca ggatgttttg gtggtcacaa gcgtggctcc gtatacacgc
     3541 gcggtcgttg atgttgccaa agccgcgcat gacactggca ttgacgttat tgccttgact
     3601 gacagtctga cctcacctct ggtggcgcat gctgccttcg cctttgaaat cccacacgag
     3661 ggcagttaca tcagcaatag cctaggcgca tacctcgtgt tttgtgaggg gctcgtcaat
     3721 cttgtagcta aagagttggg caccaagggg ctagcctgcc tagaacaacg cgaggccatg
     3781 atcgaacggt taaagatcga aacgccttag ctagacccaa cctcggcaag ctcaacgaag
     3841 cgttatgccc cttgcagtgc ctgcgccacg aacatcagac gatcctgacc ccagaacatc
     3901 tcaccatcga tgacataggt cggtgc
//
LOCUS       DATBNL010000472         2506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_95321, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000472 DATBNL010000000
VERSION     DATBNL010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95321"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /locus_tag="VIC30_08260"
     CDS             complement(<1..1014)
                     /locus_tag="VIC30_08260"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011205272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HEY7804407.1"
                     /translation="MNDVTLGGDRAAGVQATEQASAQTHTQNHAQALDVLHNVFGHSE
                     FRLQQAQAIEHVLTGGDALVLMPTGGGKSLCYQVPALMLPGTAVVVSPLIALMQDQVC
                     ALAALGVRAASLNSTMTSDESRSVEQRLVQGQLDLLYVAPERLMMPRMLELLGQIRIG
                     LFAIDEAHCVSQWGHDFRPEYLALGELASRWPDVPRIALTATATQQTREDMIERLRLK
                     QAQTFASGFDRPNVFYEVVDKADVQAQLLAFIRTRHAGQSGIVYTASRARAQALAMWL
                     KRHDVKALPYHAGMDREVRAANQDRFKREAGVVMVATIAFGMGIDKPDVRFVAHVDMP
                     RSLE"
     gene            complement(1011..2036)
                     /locus_tag="VIC30_08265"
     CDS             complement(1011..2036)
                     /locus_tag="VIC30_08265"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEY7804408.1"
                     /translation="MIETLSAAMGLAVSDPVFWMPLVLITLVTVLLLGLVLLDGIALG
                     VGLLMLWVPAQHKRLLLDTVKPWQRANERWLPLLLALSMAAFPLAWSEMIEGLYAPFL
                     MLVAGALLRSLAIRGANRVWLYALASVLGAVGFGLLLAAYATGQRFHWSFVAFDAVMS
                     LSMVAAFALLAASWVLIKRPFDALTARLASLGAAAARWSAAGMVALSLMLALANPAIF
                     YKWTHADHLQIAAVWWTVMLVAFVWLDRLLRTWGQSAVPIERRIRMPLLLSWLLLGLM
                     FVGLLYSVFPFLVLDELTIWDAAASPESLALVTYMAAVLGVLGLCVQGWDYRRLLADD
                     TLAINHS"
     gene            complement(2033..>2506)
                     /locus_tag="VIC30_08270"
     CDS             complement(2033..>2506)
                     /locus_tag="VIC30_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804409.1"
                     /translation="WCVVLNALAMAAAVSLLWLATQAMPETAPFYVTLMQGASDSVQA
                     IWVRLTFVSWLLTMAALVIGLTRPQPKQRSRALLHKLPVITAPLFWGLVYWQISGRWS
                     QSTVAGLPVADLVSTQPVWVLAFGCLLVITVLLAGLRMLFGLMRAPDQARQGAAA"
BASE COUNT          661 a          808 c          617 g          420 t
ORIGIN      
        1 ctcaagcgaa cggggcatgt ccacatgcgc gacaaatcgc acatcaggct tatcgatgcc
       61 catgccaaag gcaatcgtcg ctaccatcac caccccagcc tcgcgcttga aacggtcttg
      121 gttggctgcg cgcacctcgc gatccatgcc ggcgtgatag ggcaaagcct tgacgtcgtg
      181 gcgcttaagc cacatcgcaa gcgcctgggc tcttgcgcga gaggcggtat acacaatgcc
      241 actttgcccc gcatgtcggg tccggatgaa cgccagcaat tgcgcctgaa catcggcctt
      301 atcgaccacc tcataaaaca cgttcggtcg atcaaagcca ctggcaaagg tctgcgcctg
      361 tttcaaacgc agccgctcga tcatatcctc gcgcgtttgc tgtgtggctg ttgccgtcag
      421 tgcgatgcgt ggcacgtcag gccagcggct agctaactcg cctaaggcca gatactccgg
      481 ccggaaatcg tgtccccatt gcgagacaca atgcgcttca tcaatggcaa acaaaccgat
      541 gcgtatttga ccgagcaact cgagcatgcg cggcatcatc aaacgctctg gcgccacata
      601 caagaggtct aactggccct gtaccaaacg ttgttcaacc gaacgggact catcgctagt
      661 catggtcgaa ttcaagctcg cagcacgcac gccaagcgca gccaaagcac agacctgatc
      721 ttgcatcaat gcaatcagag gtgaaacaac caccgccgtg ccaggcagca tgagtgcggg
      781 cacctgatag caaagggact taccgccccc agtgggcatc aagaccaatg cgtcaccgcc
      841 ggttagtaca tgttcgatgg cttgcgcctg ctgtagacga aactcggagt gaccaaacac
      901 gttgtgaagc acatcaagcg cttgtgcatg gttttgtgta tgggtttgcg cactggcctg
      961 ctcagtggcc tgcacgccgg ccgcgcgatc accacctaac gtgacatcat tcatgaatgg
     1021 tttatcgcca gcgtgtcatc agccagcaaa cgtcgatagt cccacccttg cacacacaac
     1081 cctaaaactc ccagcaccgc agccatgtag gtcacgagcg ccaaggactc gggcgacgcc
     1141 gcagcatccc agatcgtgag ttcatcgagc accagaaatg ggaacacgct gtagagcaaa
     1201 ccgacaaaca ttaggcccag caataaccaa ctgagcaaca acggcatacg tatgcggcgc
     1261 tcaatcggta ccgcactctg cccccacgtg cgcagtaacc gatccagcca cacaaacgcc
     1321 actagcatca ccgtccacca cacggcagca atctgtagat gatcggcgtg tgtccattta
     1381 taaaaaattg ccggatttgc caacgccagc atgagcgaca gtgccaccat gccagccgca
     1441 ctccaacggg cagccgctgc acccagactg gctaagcgtg ccgttaacgc atcaaacggt
     1501 cgcttgatca gtacccagct ggctgccaac aaggcaaatg ccgcgaccat ggacaaactc
     1561 attaccgcat caaaggccac aaacgaccag tgaaaccgtt ggccggtcgc gtaagccgcc
     1621 aacaacaacc caaaacccac tgcaccgagc acactggcaa gtgcatacaa ccagacccgg
     1681 ttagcacccc ggatggccaa actgcgcaac aaggcgcctg ccaccaacat cagaaacggc
     1741 gcatacaacc cttcaatcat ctcagaccaa gccagcggaa aggcagccat cgaaagcgca
     1801 agcagcaaag gcaaccagcg ctcgttggca cgctgccagg gtttgacagt gtctagcaac
     1861 agtcgcttat gctgcgctgg cacccacagc atgagcaaac ctacccctaa cgcaatgccg
     1921 tccaataaaa ccaggccaag caacaagacc gtgaccaatg tgatcaaaac caaaggcatc
     1981 caaaaaaccg ggtcgctcac ggctaacccc atggccgctg agagtgtctc aatcatgccg
     2041 cagccccctg tctagcctga tctggcgcgc gcatcaaacc aaacaacata cgcagccccg
     2101 caagcagcac ggttatcacg agcaaacaac caaaggccag cacccagacg ggctgggttg
     2161 ataccaaatc ggccactggc aacccagcaa ccgtggattg agaccagcga ccactgattt
     2221 gccaatacac caacccccag aaaagcggtg ccgtgatcac cggtagcttg tgcagcagcg
     2281 cccgtgacct ttgtttgggt tggggtctag tcaacccaat gaccagtgca gccatcgtga
     2341 gcagccatga tacgaacgtc aaacgcaccc agatcgcttg gactgagtct gaggcacctt
     2401 gcatgagcgt cacgtaaaac ggtgctgtct caggcatggc ttgcgtggcc aaccacagca
     2461 gactcacagc cgcggccatg gccagtgcat ttaaaaccac gcacca
//
LOCUS       DATBNL010000473         4222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105354, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000473 DATBNL010000000
VERSION     DATBNL010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4222
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105354"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(275..1855)
                     /locus_tag="VIC30_08275"
     CDS             complement(275..1855)
                     /locus_tag="VIC30_08275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013804285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7804410.1"
                     /translation="MKPTFAFSMAAVLLATTATASAETLRWARSGDALTLDPHAQNEG
                     PTHTIRHQMYEPLIIRDMTGAFEPALATDWAPSESDPNVWVFNLRKGVKFHDGADFTA
                     QDVVFSFERAKQPNSDMKELIGSITEVRAIDDHTVEIVTDGPNPILPSNLTNLFIMDK
                     DWAEANDTVNVQDFEGGEITYATTNANGTGPYILKSREPDVRTVMTKNDNYWGVDQFP
                     MEVTEIIYTPIQNASTRVAALLSGEVDFLQDMPVQDIERVNRTDGNVVKQAPQNRVIF
                     FGMNMGADDIEADNVDGKNPLADVRVRKAMSMAINRDAIQQVVMRGQSQPAGMIAPPF
                     VNGWTEEMDSESKTDIAQAKELLAQAGYPDGFSIRLDCPNDRYVNDEAICQAVVGMLG
                     QIGIKVNLDAKPKAQHFPLITNGETDFYMLGWGVPTYDSEYVFNFLVHGRESDIGSWN
                     GTGYNNEALNAKIKSLASNTDLQARNQDIAEIWRVVQDEQLYIPIHHQVLNWGMSDKV
                     GIEVDPEDQPKVKYITIN"
     gene            complement(1998..>4222)
                     /locus_tag="VIC30_08280"
     CDS             complement(1998..>4222)
                     /locus_tag="VIC30_08280"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013721287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEY7804411.1"
                     /translation="GGIGAGRIMSAAGTDIEATLINCFVQPVGDCIQGQDADGYPGIY
                     EALREAAETMRRGGGVGYDFSRIRPKGARVKGTASIASGPCSYINVFDQSCSTVESAG
                     ARRGAQMGVLRIDHPDVQEFITAKRTPGRWNNFNVSVGVTDAFMQAVEQDANWPLTHG
                     AEPGEDIKQDGAYQLDDGRWVYRSIAARELWDIVMQSAYDFAEPGILFLDNINRDNNL
                     HYCERIDATNPCGEQPLPSYGCCDLGPIILTRFVQNPFGHTGQAAFDFEGFSNVVATQ
                     VRALDNVLDVTFWPLEQQRQQAMDKRRIGVGFTGLGDTLVMLGLRYDHHDARMLATRI
                     AQTMRDVAYRASVELAKEKGAFPAFDAQQYLKEGTFASRLPEEIKQAIEKHGIRNSHL
                     ISIAPTGTVSLAFADNASNGIEPAFSWRYQRKKREADGSTQEYAVEDHAWRMYRELGG
                     DTDNLPDYFISALELSASDHIAMMEAVQPFVDTAISKTVNIPADYPYEDFKLLYNKAW
                     AADLKGMATYRPNNILGSVLSTTPEAQTSDAPADSNDTSIDPMRTVIEKRPKGGLPAV
                     AEKIDYVTQDGQKTLYIVVSFLPVPDAQTGGTVERAIEFFMPVGQSDQSQQWITASMR
                     LLSLAARGGFLARALSDMRKVVWDRGPVRLGTVLKADGTEVPRWHDSEVAAIAYAVQR
                     IIDRRRGLVTESGQMDESAAAESTQMAGRKCPECGAHAMIRKDGCDYCTACGAIGSCG
                     "
BASE COUNT          901 a         1138 c         1154 g         1029 t
ORIGIN      
        1 cgttcaaagc atccaccgat cactacccgg tgagaaaaat ggtctcgtct tcctggcatc
       61 gggctgtgcg gatgtgtcag tcgcacgccg gatcaaccaa gtcatgacgc ttaaaagtgc
      121 ctttcgatag tgattctcgt atcaaccgtt tgcagacagt ttgcaactcg ttcgcgaccg
      181 gtttggaacc gcaaatttgg ccagccaccc ctcagtgtca ggtatcacat caccacatta
      241 cggtgcgccc cacaatgagg gcgcaccgta atgtttagtt gatggtaatg tatttcactt
      301 ttggttggtc ttctggatca acttcgatac cgaccttgtc tgacatcccc cagttcaaca
      361 cttggtggtg aatgggaatg tagagctgtt catcctgaac aacacgccaa atctcagcga
      421 tatcctggtt gcgcgcttga agatccgtgt tcgatgccag tgatttgatc ttggcgttta
      481 acgcttcatt gttataacca gtgccattcc atgagccgat gtccgactca cgaccgtgca
      541 cgagaaagtt aaacacgtac tcggagtcat acgttggcac accccagccc agcatgtaga
      601 aatcagtctc accgttggtg atgagcggaa agtgttgtgc tttgggtttg gcatcgaggt
      661 tcaccttgat accaatttgg cccagcatgc cgaccacagc ctgacagatg gcttcatcat
      721 tgacatagcg atcgttgggg cagtctaggc gaattgaaaa accatcaggg tagccggctt
      781 gcgccagcag ttccttggcc tgtgcgatgt cggttttaga ctctgagtcc atctcttcgg
      841 tccagccatt gacaaagggc ggcgcaatca tgccagcggg ctgactttga ccgcgcatca
      901 caacttgctg aatcgcatcg cgattgatcg ccattgacat ggccttgcgc acacggacgt
      961 cggccagtgg gtttttgccg tcaacattgt ccgcctcgat gtcatcggca cccatgttca
     1021 tcccaaaaaa gatcacacgg ttttgtgggg cttgtttgac cacattgcca tcggtacggt
     1081 tgacgcgttc aatatcctgc acaggcatgt cctgcaggaa atccacctcg ccagacagca
     1141 aggccgcgac acgggttgat gcattttgaa tgggggtata gatgatttca gtgacttcca
     1201 ttgggaactg atcaacgccc cagtagttgt cgtttttggt catgaccgta cgaacgtctg
     1261 gctcacggct ttttaagata tagggacctg tgccgttggc attggtggtg gcatacgtga
     1321 tctcgccacc ctcaaagtct tgtacgttga ccgtgtcgtt ggcctcggcc cagtccttgt
     1381 ccatgatgaa caagttggtc aggtttgacg gcaggatggg atttgggcca tcggtcacga
     1441 tttcaacggt atggtcatcg atcgctctaa cttctgtaat cgagccgatg agctctttca
     1501 tgtctgagtt gggctgtttg gcacgctcaa agctgaacac cacgtcttga gcagtgaagt
     1561 cggcgccatc gtgaaatttc acgcctttgc gcaaattgaa cacccagacg ttagggtcac
     1621 tttcacttgg ggcccagtcg gtcgcaagcg caggttcaaa cgcaccggtc atgtcccgaa
     1681 tgattaacgg ctcgtacatc tggtgtcgaa tggtgtgcgt tggcccttcg ttttgcgcgt
     1741 gcggatcgag cgttagtgca tcgccagagc gagcccatcg caatgtttcg gcactagcgg
     1801 tcgctgttgt tgctagtaga acggctgcca tggagaaagc aaatgtcggt ttcataaaac
     1861 tttccttttt gattgaccat ctcagggttt aggtatcaac cttgtcagca gagtttagcc
     1921 ggacgtggtt tggggtcaag tattattttg cagaattatt gcaacagttc acacccgccc
     1981 cttggtactc gcctctgtta gccacaactt ccgatggccc cgcacgccgt gcagtagtca
     2041 cacccatctt tacgaatcat ggcgtgtgcg ccacactcag ggcatttacg tccagccatt
     2101 tgagttgact cagcagccgc tgattcgtcc atttggccgc tttcagtaac taatccacga
     2161 cgcctgtcga tgatgcgttg cacggcatag gcaatggcgg cgacttccga gtcatgccag
     2221 cggggcacct cggtgccatc ggccttgagc acggtgccca aacggaccgg cccacgatcc
     2281 cataccacct tgcgcatgtc actgagtgcg cgggctaaaa aaccaccacg agcggcaagc
     2341 gagagcaggc gcatgctggc cgtaatccac tgctgtgatt ggtcactttg ccccaccggc
     2401 atgaaaaatt caatcgcccg ttctactgtg ccacctgttt gtgcatcggg caccggtaaa
     2461 aaggacacca cgatgtagag tgtcttttgc ccatcctggg tgacgtaatc gattttttct
     2521 gcgaccgcgg gcaagccacc cttgggtctt ttttcaatca ccgtgcgcat cgggtcaatg
     2581 ctggtgtcat tgctgtcagc cggggcatca gacgtttgtg cctcgggcgt ggtcgacaac
     2641 acagagccca agatgttgtt gggccgatag gttgccatgc ctttgagatc ggcggcccat
     2701 gctttgttgt agagcagctt gaagtcttcg tagggatagt cagcagggat gttgacggtc
     2761 ttggaaatgg cggtgtcaac aaagggttgc acggcctcca tcatggcaat gtggtcacta
     2821 gctgagagtt caagtgcgga gatgaaataa tcgggcagat tgtcggtatc gccgccaagc
     2881 tcccggtaca tacgccaagc atgatcttca acggcgtact cttgcgtgga gccatcggcc
     2941 tcacgtttct tgcgttgata gcgccaagaa aacgccggct caatgccatt ggaggcgttg
     3001 tcggcaaacg ccagactaac cgtgcccgtg ggtgcaatcg aaatcaaatg gctgttacgg
     3061 atgccgtgct tttcaatggc ttgcttgatt tcttcgggca agcgactggc aaacgtgcct
     3121 tctttgagat actgctgcgc gtcaaatgcc gggaaggcac ctttttcttt ggctagctcg
     3181 actgatgctc ggtaagccac atcgcgcatg gtttgcgcaa ttcgggtagc cagcatacgc
     3241 gcgtcgtgat ggtcgtagcg caagcccagc atgacgagcg tgtcacctaa tccggtaaag
     3301 ccaacaccga tacggcgctt gtccatggct tgttggcgct gttgctcaag cggccagaag
     3361 gtgacgtcta gcacgttgtc gagtgcgcgc acctgcgtgg ctaccacgtt gctaaacccc
     3421 tcaaaatcaa acgcggcttg accggtatga ccgaatgggt tttgtacaaa acgcgtcaga
     3481 atgatgggac caaggtcgca gcaaccgtag gagggaaggg gctgttcgcc acacgggttg
     3541 gtggcgtcga tgcgctcgca gtagtgcagg ttgttgtcac ggttgatgtt gtctaaaaac
     3601 aaaatccctg gctcagcaaa gtcgtaagcc gactgcatga cgatatccca cagttcgcgc
     3661 gcggcaatgc tgcgatacac ccaacgacca tcatcgagtt gataggcgcc gtcttgtttg
     3721 atgtcttcac caggctcggc gccatgggtc aagggccagt tggcgtcttg ttcaaccgct
     3781 tgcatgaatg catcggtcac gcctaccgag acattgaagt tgttccagcg acctggggtg
     3841 cgcttggccg tgatgaactc ttgtacatcc gggtgatcaa tgcgcagcac gcccatttgg
     3901 gcaccgcgac gtgcgccagc gctttcaacc gtcgagcacg actggtcgaa cacattgatg
     3961 taactgcacg ggcctgaggc aatcgaggcg gtgcctttga cacgcgcacc cttagggcgg
     4021 atgcgcgaga agtcataacc cacgccacca ccgcgacgca tggtttcagc agcttcacgc
     4081 agggcctcat aaatacccgg atagccatca gcgtcttggc cttgaatgca gtcgcccacg
     4141 ggttgcacaa agcaattgat gagtgtggct tcaatgtcgg tgcctgccgc actcatgatg
     4201 cgaccggcgc caatgccacc ac
//
LOCUS       DATBNL010000474         2466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105374, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000474 DATBNL010000000
VERSION     DATBNL010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105374"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..1106
                     /gene="arsS"
                     /locus_tag="VIC30_08285"
     CDS             102..1106
                     /gene="arsS"
                     /locus_tag="VIC30_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426222.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HEY7804412.1"
                     /translation="MKSTLPLLLKTDFPAITRKGLQTLQVNLGYLCNQSCQHCHVNAG
                     PNRTELMGKDTMDLVLKVLDKHSIELLDLTGGAPEMNPHFRYLVSGARARGVTVMDRC
                     NLTILSEPGYEDLAQFLADNQVQVTASMPCYSPANVDKQRGQGVFDRSIIGLQTLNRL
                     GYGMPGSGLELNLVYNPQGASLPPPQGALEADYKRELKSHFGIEFTQLFTITNMPIQR
                     FGAVLLSNGLFEDYMQLLKDAYRPENLETVMCRSLLSVDYEGYLYDCDFNQMLQLPAG
                     GRDDERPHLRELLMRDDYNTAIRVGEHCYGCTAGQGSSCGGALEESTARETIIEFHSN
                     "
     gene            1115..>2466
                     /locus_tag="VIC30_08290"
     CDS             1115..>2466
                     /locus_tag="VIC30_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009549566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7804413.1"
                     /translation="MKPNKTWQRWLFVLVALVAIVWVYRAYDLGSLLTLDQLKQSRDQ
                     LLGLFDEQPALTLGIYFAVYVVATAVSFPGAVILTLAGGAIFGFWVGLLVVSFASGLG
                     ALLAFLVARYLLHDTVQSHFARTLAPINEGVKRDGVFYLLTLRLVPVFPFWLVNLVMG
                     LTPMTAWRYYITSQIGMLPGTAVFVLAGTQLASINTVGDVLSPGLLISFILLGVFPII
                     AKLVVNWVKHKKIYARWPKPNSFDRNLVVIGGGAGGLVTAYIAAAVKAKVTLIEGHKM
                     GGDCLNYGCVPSKALIRSAKLSKQLKHAEQFGFKNVSGQADFPSVMQRVHEVIKEIEP
                     HDSVERYTALGVEVLQGHAVITSPWHVQVTLADGSQQTLSTRNIVIAAGASPFVPPIP
                     GLSEAGYLTSDTIWNLTQQPKRLIVLGGGPIGCELAQSFARLGSEVTQVEMGPRLLSR
                     "
BASE COUNT          537 a          676 c          668 g          585 t
ORIGIN      
        1 gttgacaacc cacagttgca aggggctttt gtaaccccta cctgtaacca ttgacgtacc
       61 atgagcgaat ggtcagatag acattgatac aaaggatgcc catgaagtcc accctgccac
      121 tgctgctcaa gactgatttc cccgccatta cccgcaaagg cctacaaacc ctgcaggtca
      181 atctcgggta cttgtgcaac cagtcctgtc agcactgcca tgtcaatgcc gggcccaacc
      241 gcaccgagct catgggcaaa gacaccatgg atctggtgct caaagttctg gacaagcact
      301 cgattgaatt gctcgattta accggcggtg cgccggagat gaacccgcat ttccgttact
      361 tagtgtccgg tgcgcgcgcg cgtggggtga cggtcatgga ccgctgcaac ctgaccattc
      421 tttctgaacc cggttacgag gatttggccc agtttctggc cgacaaccaa gtgcaagtca
      481 ccgcttctat gccctgttat tcgccggcca acgttgacaa gcaacgcggc cagggcgtgt
      541 ttgaccgaag catcatcggc ttacagacac tgaatcgctt gggctacggc atgccaggct
      601 ctgggcttga attgaatttg gtctacaacc cgcaaggcgc gagcctgccc ccaccacaag
      661 gtgcattaga agccgactat aagcgtgagc tcaagtcgca tttcgggatt gaattcacgc
      721 aactctttac catcaccaac atgccgattc aacgttttgg ggcggtgttg ttaagtaacg
      781 gcttgtttga agactacatg cagttactca aagatgccta tcgacccgag aaccttgaga
      841 ccgtgatgtg ccgttcgcta cttagcgtgg actacgaggg ctatctctac gactgtgact
      901 tcaaccagat gttgcaattg cccgccggtg gcagggatga cgaacgccct cacctgcgcg
      961 agttgctcat gcgtgatgac tacaacacag ctattcgtgt gggtgaacac tgttatggtt
     1021 gtaccgccgg tcaaggcagc agttgtggcg gtgcacttga agaaagcaca gcccgtgaaa
     1081 ccatcatcga gtttcactcg aactaaggct catcatgaaa ccgaataaaa catggcagcg
     1141 ctggctgttc gtgctggttg cgctcgtggc tatcgtctgg gtctaccgag cctatgatct
     1201 cggtagcctg cttaccctag accaactcaa acaaagccgc gatcagctgc tcggtctgtt
     1261 tgatgagcag ccggcactca ccctaggtat ctacttcgcg gtgtatgtgg ttgccacagc
     1321 agtctcattc ccgggcgcgg tgatcctgac attagccggg ggtgccatct ttggtttctg
     1381 ggttggtttg ctagtggtgt cgtttgcctc tggcctaggc gcactactgg catttctggt
     1441 ggcacgctat ctgttgcacg acacggtgca aagccacttt gcccgcacgc tagcaccgat
     1501 caatgagggt gttaaacgcg atggcgtgtt ctacctattg acgctgcgtc tggtgccagt
     1561 gtttccgttc tggttggtga atctggtgat gggcttaaca cccatgactg catggcgtta
     1621 ctacatcaca agccaaatcg gcatgctgcc ggggacagcg gtgtttgtgt tggccggcac
     1681 acaattggcc tcaattaaca ccgttggcga tgtgttgtca ccgggcctgc tgataagttt
     1741 catcttgctc ggggtatttc caatcattgc caaactcgtg gtcaattggg tcaagcacaa
     1801 aaagatctat gcacgctggc ccaaacccaa ttcgtttgac cgaaacctcg tggtgattgg
     1861 cggtggtgcc ggtggcttgg ttacggctta cattgctgcg gccgtcaaag ccaaagtcac
     1921 actcatcgag ggccacaaaa tgggcggtga ctgcctgaac tacggttgcg tgcccagtaa
     1981 agccttaatt cgctcggcca aactgtccaa gcaacttaaa catgccgagc agtttggttt
     2041 taaaaacgtc agtggccagg cagatttccc gtcggtgatg cagcgcgtgc atgaggtcat
     2101 taaagaaatc gagccgcatg actccgttga gcgctacacc gcactcggtg tcgaagtgct
     2161 gcaaggccat gcggtcatca cctcaccctg gcatgtgcaa gtgaccttgg ccgacggcag
     2221 ccaacagacc ttgtccactc gtaacattgt gatcgcagcc ggcgcctcac cctttgtgcc
     2281 gccgattccc gggttgtctg aagccggtta tctgacaagc gacaccatct ggaatttgac
     2341 gcaacaaccc aaacgcttga ttgtgcttgg tggcgggccc attggttgcg agttggcgca
     2401 aagttttgcg aggttaggca gcgaggtcac gcaagtggaa atgggcccac ggctgctcag
     2461 ccgtga
//
LOCUS       DATBNL010000475         2200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_55505, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000475 DATBNL010000000
VERSION     DATBNL010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55505"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..430
                     /locus_tag="VIC30_08295"
     CDS             188..430
                     /locus_tag="VIC30_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013899969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEY7804414.1"
                     /translation="MTRFIRSNAFTLKKTASYYVTHMTVAAAVAYAVTGSWVAAVTLS
                     LLEPTVQTIVYFFHERIWLRYERRQTHTNKPVKQPV"
     gene            complement(528..1001)
                     /locus_tag="VIC30_08300"
     CDS             complement(528..1001)
                     /locus_tag="VIC30_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804415.1"
                     /translation="MKSLIVGVSLLCLSTGALAQEQTLTFYLKKGYLEYVDDGPKDAS
                     VGDMYVRQGDVSMSADGKAVGEYFTQATLVYLNKDINKSVRSYFAEIILPEGSIYKTD
                     FLRMRDGKPIGKGHKHTGAIIGGTGKYAGIRGTYTLGVSPSGKDAKTTLTYWLGQ"
     gene            complement(1112..1780)
                     /locus_tag="VIC30_08305"
     CDS             complement(1112..1780)
                     /locus_tag="VIC30_08305"
                     /inference="COORDINATES: protein motif:HMM:NF018604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family protein"
                     /protein_id="HEY7804416.1"
                     /translation="MIKTSSNWPGWGLCFVFGLLDAVCYLALGGAFAGLMAGNLVLMG
                     LSLGDFGLHSASLVYIWPILGFTLSAAIAGAVRPGTTFRTLKVDLLWTGWSILLATCL
                     IVWAGDPVYVTAIGWLVVTATASCLGFLSGALFLSRRFDETKPTRANFLADGLSHLVS
                     YHAAGNKVMAIVFFLFGAVAGGLIVNTLGLGYAFSLALLVSLLAIRTEVKQLKDPADQ
                     TTGA"
     gene            1961..>2200
                     /locus_tag="VIC30_08310"
     CDS             1961..>2200
                     /locus_tag="VIC30_08310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804417.1"
                     /translation="MNTPTPNTATHARKPLKRFVAVALLTTSPFYIPAKVLAADIRLY
                     GGADVGVSYVHTSTNNQSASRLGMDSSVLDDSMIGL"
BASE COUNT          604 a          618 c          489 g          489 t
ORIGIN      
        1 tttttaaaaa caaacattca aactaccgta tcaggttagc tacagagggg ttgcctaccg
       61 ggaggtcggc tgccaaggca gtgcattggg caattgttta gagctatcgc caatgtttat
      121 tcaatcaatt ttacaaacca cctggcgctt ggcatgatgg gtactgtaat tccccactgg
      181 actcatcatg accagattca tccgctcaaa cgctttcacg ctcaaaaaaa cggcttccta
      241 ctacgtcacc cacatgacgg tagcggccgc cgtagcgtac gcggttacgg gcagttgggt
      301 cgctgcggtt acattgagct tgctcgaacc cactgtccag acgattgtgt atttctttca
      361 tgaacgcatc tggttgcgct acgaacgcag acaaactcac acaaacaagc ctgttaagca
      421 accggtttga tagctacacg caaccaaccg tcaagctaac gggttggctg cgtcttcagt
      481 tgcgtctacg cgcctgatgt tgcaacaaac acagtgacgc gattgcccta ctgtccgagc
      541 caataggtca gcgttgtctt cgcgtctttg cccgagggcg agaccccaag cgtgtaggtg
      601 cctctaatgc cagcatattt gcccgtacca ccgataatgg cacccgtatg cttgtgaccc
      661 ttaccgattg gtttgccatc acgcatacgc aggaagtctg ttttgtagat tgatccttct
      721 ggcaagataa tttcagcgaa ataagaccta acactcttgt tgatgtcctt gttcagataa
      781 acaagggtgg cttgggtgaa gtactcacca actgccttgc catcggccga catcgataca
      841 tcgccttgac gcacatacat gtcgccaacc gatgcgtctt taggaccatc atcgacgtat
      901 tctagatagc ctttttttaa atagaaggtc agtgtctgct cttgcgcaag tgcgcccgta
      961 cttagacaca acaatgacac gcccacaatc aatgacttca tcaaaaactc ctttagtgac
     1021 tattggtcac taaagtttag caaagccttg ccctacacac cagatcggac aatgacgttg
     1081 tggacgatgt tgtaggcgca tttatagaaa actacgcacc ggtcgtttga tcggccggat
     1141 ccttgagctg cttaacctct gtccgaatgg ccaagaggct gaccaacaac gccagactga
     1201 aggcgtaacc aagcccgagc gtgttaacaa tcagaccacc ggccacggca ccgaataaga
     1261 aaaagacgat cgccatcacc ttgttgccag ctgcgtgata actcaccaag tgggataaac
     1321 catcggccaa aaagtttgct cgagtcggct tggtttcatc aaagcggcgt gacaaaaaca
     1381 aagcaccact taaaaacccc agacaagaag ccgtggcggt aacgaccagc caaccgatgg
     1441 ctgtcacata aacgggatcc cccgcccaga caatcaaaca agtcgccaac aaaatcgacc
     1501 aacctgtcca caacagatct accttcaagg tacgaaacgt ggtgcctggt cgtaccgcgc
     1561 cagcgattgc cgccgacaac gtgaatccaa gaataggcca tatataaacc agactcgcgc
     1621 tatgcaagcc aaagtcaccg agcgacaggc ccatgaggac taggttgccc gccatcaaac
     1681 cggcaaacgc gccaccgagc gctaaatagc agaccgcatc caacaaaccg aacacaaaac
     1741 acaaacccca accaggccag ttactgcttg ttttaatcat gaatcttctc acaaccaata
     1801 ggagatcagc ggctggcaac atgtaccaat accgaactgc ttgaacacac tctcgctgcg
     1861 tagctacagt gcgacagcct tatagagcga gaagtttaag cgtctttttg tgacaaaaga
     1921 ccatcaatca acggtgggta cattcggtta tccttatcgc atgaatacac ctaccccaaa
     1981 caccgcaacc catgcccgta agcctctgaa gcgattcgtt gcggtcgcac tgctgacaac
     2041 tagcccgttt tacataccag caaaagtgct tgccgctgac attcgcctct atggtggtgc
     2101 cgatgttggc gtcagttacg tccacacatc gactaacaat caaagtgcga gtcgtctagg
     2161 catggactcc agcgttctcg atgactccat gatcgggtta
//
LOCUS       DATBNL010000476         2851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105425, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000476 DATBNL010000000
VERSION     DATBNL010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105425"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1307)
                     /locus_tag="VIC30_08315"
     CDS             complement(<1..1307)
                     /locus_tag="VIC30_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HEY7804418.1"
                     /translation="MWIAIAPEPWRPEWQAPLVAAAATLTPTMVWRDHVLLLDIEASL
                     QWLGGIRGLKRQTQREIAAVVTAGHIVMARTALGAWLLALEGSPQPLGWRWRYALSAR
                     RLSQQLDRVAMTYLPQTQPYRDWFAHLGCHVLGQLRALDRSELQARTSRELLNALDQA
                     YGQAVFTYQPLTLPVQFHQRRELPRLIQDTTALEPYVKHLLEALCIWLKANHLAVSRL
                     ECRLHHRDRQRAHQPTVITLSIAQASDEHALLWRWFAVRLERMTLPAQVSDIAMLTRT
                     LCARQDRNLRLFDDDVQTNSSVSQTLDLLRARLGQASVRQAQPKADYRAEAANTWQAS
                     GDTAAVPASIDANSLTQTDWGAHCPAWLLPKPKALSTRQDQPQLQGPLRLLQGPWRVE
                     TGWWDQQLVARDYFVASDASARRYWIYRERDQTGARWFLHGLFG"
     gene            complement(1270..2043)
                     /gene="imuA"
                     /locus_tag="VIC30_08320"
     CDS             complement(1270..2043)
                     /gene="imuA"
                     /locus_tag="VIC30_08320"
                     /inference="COORDINATES: protein motif:HMM:NF033429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0051782 - negative regulation of cell
                     division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translesion DNA synthesis-associated protein
                     ImuA"
                     /protein_id="HEY7804419.1"
                     /translation="MAPTVLTTATTATTATTTQSVEQTRLPPGVWRASQQAAPPARLC
                     PTHHASLSRWLPGGGWPLGSLIEVLTEARGSGELALVAPALAGLPTQRPIVLLNPPGM
                     PNALAWQQWQIASDRLWWIHSKSLADAWWSAETVLRSRSFAALLAWVDPIEDQALRRL
                     HASVQDTTTLTFLFRPQACATQFSPCPLRLVATPTTNGLSIEMLKSKGRKPAEPMTVA
                     LGSGVGLEMSQMKQTTQTMQTMQTKASHVDCHRTRALAP"
     gene            2256..>2851
                     /locus_tag="VIC30_08325"
     CDS             2256..>2851
                     /locus_tag="VIC30_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005662708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HEY7804420.1"
                     /translation="MAQDLVVRRPQGLYCPPGDFYIDPWRPVERAVITHAHADHARTG
                     HGHYLASEVGQNVLRTRLGDINLQALAYGQTIEHNGVKISLHPAGHVLGSSQVRLQWR
                     GEVWVVSGDYKLDPDPTCASFEPVTCHTFITESTFGLPVYRWPDTHQTMQDINAWWAS
                     NAREQRASVLYAYSLGKGQRILAGIDASIGPIVTHSSL"
BASE COUNT          605 a          756 c          840 g          650 t
ORIGIN      
        1 ccgaacaagc catgtaaaaa ccaacgcgcg ccggtttgat cccgttcacg ataaatccag
       61 tatcgcctag ccgatgcatc acttgccaca aagtagtcgc gtgcgaccag ttgttggtcc
      121 caccaaccgg tttccactcg ccagggacct tgcagcaagc gcaacgggcc ttgcaactgg
      181 ggttgatctt gtcgtgtgct caatgcttta ggcttaggta acaaccaggc tgggcagtgt
      241 gcaccccaat ccgtttgggt aagtgagttg gcatcgatcg aggcaggcac tgctgctgtg
      301 tcgccgctgg cctgccaggt attggcggct tcggctcgat aatcggcttt gggctgtgct
      361 tgtctgacgc tggcttgccc taagcgagcg cgcaacaaat ccagtgtctg cgagacactg
      421 ctattggttt gtacatcatc atcaaacagt cgcaagttgc gatcttgtcg tgcgcacaag
      481 gtgcgtgtga gcatggcaat gtcagagacc tgcgcgggca atgtcatgcg ctcaaggcgc
      541 accgcgaacc aacgccataa gagggcgtgt tcgtcacttg cttgcgctat cgagagcgtg
      601 atgaccgttg gttgatgcgc acgctgacga tcgcggtgat gcaggcggca ttcaaggcgt
      661 gagacagcca aatggttggc cttgagccag atgcacaagg cctctagtag gtgcttgacg
      721 taaggttcga gcgcagtggt gtcttgtatg agacggggta gttcgcgtcg ctggtgaaac
      781 tgcacgggta aggtcaatgg ctgataagta aacacagcct gcccgtaagc ttggtctagc
      841 gcatttagca actcgcggct cgtgcgtgct tgtaactcgc tgcgatcgag tgcgcgtaac
      901 tggcccagca catggcagcc taagtgagca aaccagtccc gataaggttg cgtttgaggt
      961 agataggtca tggccacgcg atcgagctgt tggctcaggc gtcgcgctga taaggcatag
     1021 cgccagcgcc acccgagggg ctgtggcgaa ccttcaagag ccaacagcca agcgccgagt
     1081 gcggtgcgtg ccattacaat gtgaccggca gtgactaccg cggcgatttc acgctgagtt
     1141 tggcgtttta agccacggat gccgcctaac cactgcaaac tggcctcgat atcgagcagc
     1201 aatacgtggt cgcgccagac catggttggc gtgagcgtgg cggcagcggc caccagaggt
     1261 gcttgccatt cagggcgcca gggctcgggt gcgatggcaa tccacatggc tggcctttgt
     1321 ttgcattgtc tgcattgtct gcgttgtttg cttcatctga ctcatctcta aaccgacccc
     1381 tgatccaagt gccactgtca tgggttcagc cggcttgcgg cctttgctct tgagcatttc
     1441 aatagacaac ccgttggtgg tgggtgtggc taccaaacgc aacgggcaag gagagaactg
     1501 tgtcgcgcac gcctgtggac ggaataaaaa cgtcagcgtg gtggtgtctt gcacactggc
     1561 atgcaagcgt cgtagcgcct gatcttcgat ggggtcaacc caggccaaga gcgcggcaaa
     1621 cgatcgacta cgcagcaccg tttcagcgct ccaccaagcg tcggccaggc ttttagaatg
     1681 gatccaccac aaacgatcac tggcgatctg ccattgttgc caagcgaggg cattgggcat
     1741 gccaggcggg ttgagcagta cgataggtcg ctgtgtcggt aagcccgcta aggcgggtgc
     1801 tactaacgcc agttcaccac tgccgcgtgc ctcggtcagg acttcgatca ggctgcccaa
     1861 gggccaaccg ccgccgggta gccatcggct cagtgaggca tggtgcgtcg ggcataaacg
     1921 tgccggtggc gcggcttgtt ggctagcgcg ccataccccg ggcggcagac gagtttgctc
     1981 aacggattgg gttgttgttg ctgtcgttgc tgttgttgcg gttgttaaaa cagttggagc
     2041 catgtgttgc accacattca tgaaatgaga gggcaggaag ataaaaacct gtatgacgat
     2101 gttgaaaaat ctgtataaaa atctgtataa aaatctgcac taagaacctg tatgaggcat
     2161 cttaaatact gtataaatat acagttaaag taaccctaaa ccagttcagt tatcaacctt
     2221 tctattaatc ctgttatgaa ccttgttgtt tacccatggc tcaagactta gtcgtgcgtc
     2281 gcccgcaagg gctttactgc ccgccgggcg atttctacat cgacccatgg cgcccggtcg
     2341 agcgcgctgt catcacgcac gcccatgctg atcatgcccg tacgggtcac ggccattacc
     2401 tcgcgagcga agtcggccag aatgtgttgc gtacgcgttt aggtgacatc aatctgcagg
     2461 cgcttgccta tgggcaaacg attgagcaca acggcgtcaa gatcagtctg catccggcgg
     2521 ggcatgtact gggttcgtcg caggttcgcc tacagtggcg tggcgaggtc tgggttgtct
     2581 cgggcgacta caaacttgat ccggatccaa cgtgtgcatc gtttgagccg gtgacttgtc
     2641 atacctttat cacggaatcc acgtttggct tgccggttta tcgttggccc gatacgcacc
     2701 aaaccatgca agacatcaat gcctggtggg catcgaatgc tcgcgaacaa cgggccagtg
     2761 tgttgtatgc ctattcgctg ggcaaaggtc agcgtatctt ggctggcatc gatgccagca
     2821 tcggcccgat tgtcacgcac agttcattga a
//
LOCUS       DATBNL010000477         3987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_45426, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000477 DATBNL010000000
VERSION     DATBNL010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45426"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VIC30_08330"
     CDS             complement(<1..209)
                     /locus_tag="VIC30_08330"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY7804421.1"
                     /translation="MAAAIKHIVGRAAQRLSGITDRVADVTALVAIAVLVAAVMLQVI
                     ARYVFQSPPPWTEELARYAMIWAGL"
     gene            complement(215..1135)
                     /locus_tag="VIC30_08335"
     CDS             complement(215..1135)
                     /locus_tag="VIC30_08335"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY7804422.1"
                     /translation="MADEIKLGMNGVNDPSKNAEAAFAQGFADALKGTDFEVVVFPSG
                     TLGKEKERFDQVAQGLLEINLASVSTTYGMSPFVKGVALPFLWETNEQFDQVIAQSDL
                     MQRMNEPLLDNGVRLAGFNYIGTGIGFHNTKKPISKIEDLQDLRFRAMNSEQLAFQEA
                     LGATGTIVAWSEVANAIQTGVADGYLNPPNSAIRTGHTAFLKHFTPANISPSTRIVLI
                     SEDWYDSLNDVQKQQVDKALAAGVAANRQWVKNWASEVRKKHEEAGVTITELAPEERE
                     RMVEAARLVWAKSMPADQLQLYIDAIQNTK"
     gene            complement(1215..2501)
                     /locus_tag="VIC30_08340"
     CDS             complement(1215..2501)
                     /locus_tag="VIC30_08340"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY7804423.1"
                     /translation="MYGPIVIGVVLVGIFAGGAIAYVIGTAAISTFWLADKAGFMAVL
                     PQRLFSQLDNFAFLAMPLFIFAGDLMNRAGLASSLIDFCMSLFGRLKGGLGHVNIMTS
                     VFFAGVSGSAVSDAAALGNALVPQMRQRGYSLDYAAAITGASSIIGPIIPPSSILIFY
                     GALMDTSVTALFAAGILPGLLLAGVLMLMNTYFAYKYNHPGGKGSELPKLLPSFVRAL
                     PAMALPFIILGGTLFGFMTPAEAAAVAVVAALIIGFARRELDMNGVIKSMRRTAILLG
                     ALFIILCAISTFSYLAALEQWPQAIASTISQWGLGPLQYLMLINVIFLIAGMVMDVKA
                     AVALFAPIFVPVALAMGVDPVHLGIVICFNITTGLLSPPLGGVLLILATTIKMDYWRL
                     IRATLPFFFAEVGLLMVLTYFPEISLALPRALGLIT"
     gene            complement(2722..3243)
                     /locus_tag="VIC30_08345"
     CDS             complement(2722..3243)
                     /locus_tag="VIC30_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009553386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY7804424.1"
                     /translation="MDTNTAHHTTQHPSIKGLHHAAYRCANSEDTRAFYEDFLELPLA
                     GALKIAQTKTGRETEVLHTFYQLADGSHLAFFEAPDKPFEFKSQHDFDLHIALEVEPD
                     YLQQMLQKGKDCGIDTRGVSDHGFIDSIYFRDPNGYVIELCAKKPGHDEHLKLDNQEA
                     RTLLEQWQKRRSL"
     gene            3453..>3987
                     /locus_tag="VIC30_08350"
     CDS             3453..>3987
                     /locus_tag="VIC30_08350"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEY7804425.1"
                     /translation="MPVIPCKILPGQRSVTEVVNHLVSDIVSRAVTRSLCALVLGAAV
                     FATPVAQASDDDGAVATIQAATVKQVLQDEVRVTFSTQATGTTAPEVNRKLAAALDGA
                     RDGFQIPDGVEVSTGNFSVFLDYGKDNQPKGWTGRASLAVVSTNLDEASTVIEHFGKS
                     LAVSSLRFSLSREARQAY"
BASE COUNT          975 a         1006 c         1059 g          947 t
ORIGIN      
        1 attaggccag cccagatcat cgcatagcgt gcaagttctt ccgtccaggg tggcggactt
       61 tgaaacacat aacgcgcgat cacctgcagc ataactgctg ccacgagcac agcaatggca
      121 actagggcgg tcacgtcggc cacgcggtct gttattccag acaaacgttg tgccgcgcga
      181 ccgacgatat gtttaattgc agcagccatt gaacctattt agtattttga atggcatcga
      241 tgtagagctg taactgatcg gcgggcatgc ttttcgccca gaccagtcgt gcagcttcta
      301 ccatccgttc acgctcctct ggggcgagct cggtgatcgt gacgccagct tcttcatgtt
      361 tcttgcggac ctcggacgcc cagtttttga cccattgtcg attggcggca acgccggcag
      421 ccagtgcttt atcgacttgc tgtttctgga cgtcgttaag actgtcatac cagtcctctg
      481 atatcaaaac aatacgtgta gagggtgaga tattggctgg tgtgaaatgt ttgagaaatg
      541 ccgtatggcc tgtgcgaatg gctgagtttg gtgggttcag atagccatcg gcgacacccg
      601 tttgaatcgc attggccacc tctgaccatg caacgatggt tcccgtggca ccaagggcct
      661 cttgaaatgc caattgttct gagttcattg ctctgaaccg caggtcctgc aggtcctcga
      721 ttttactgat tggcttcttc gtattgtgaa agccgatgcc tgtgccaatg tagttaaaac
      781 ctgctaatcg cacaccgttg tccagcaatg gttcattcat tctttgcatc aagtcagact
      841 gtgcaattac ctgatcaaac tgctcgttgg tttcccacaa aaagggcaat gcaacacctt
      901 tgacgaacgg gctcataccg tatgttgttg aaactgatgc aaggttgatc tcgagtaatc
      961 cttgagcgac ttgatcaaag cgttcttttt ctttgcctag tgttccggaa ggaaatacga
     1021 cgacttcaaa gtccgtgccc ttcagtgcgt cggcgaaccc ttgtgcaaat gccgcttcgg
     1081 cgtttttaga tgggtcattg accccgttca tccccaattt gatctcatcg gccatggcca
     1141 aagtgctgct ggtggcgata gctgctgcga gggttagttg tttccacgat ttcatttgta
     1201 agtctccttg attgtcaggt gataagacct agagcgcgtg gcaatgccag cgatatttcc
     1261 gggaaatagg tcaagaccat caacaagcct acttccgcaa agaaaaaagg caatgtggca
     1321 cgaatgagcc gccagtaatc catcttgatt gtcgtggcta aaatcaacaa tacacccccc
     1381 aagggcggcg acaacaggcc tgtagtaatg ttgaaacaaa tcacaatacc caagtgcacg
     1441 ggatctacac ccatggccag tgcgacaggc acaaaaatcg gtgcgaacaa ggcgacagca
     1501 gctttcacat ccatcaccat gccggcgatc agaaagatca cgttgatgag catgagatac
     1561 tgcaacggtc ctaatcccca ctggcttatc gtgctggcga tggcttgcgg ccattgctca
     1621 agtgctgcca gataactgaa ggtcgatatc gcacaaagaa tgatgaatag ggcaccaagc
     1681 aggatggcgg tgcgacgcat gctcttgata acgccattca tgtcgagctc acgtctagcg
     1741 aacccaatga tcaaggccgc cactaccgca acggccgcag cctcggctgg tgtcatgaag
     1801 ccaaacaatg tgccaccaag aataatgaaa ggaagagcca tggccggtag agctcggaca
     1861 aaagaaggca agagtttggg aagctcactg cctttgccac ccgggtggtt gtatttgtat
     1921 gcgaagtagg tattcatcaa catgagtacg cctgccagta gcaagccagg caaaatacca
     1981 gcggcgaata gcgcagtcac cgacgtgtcc atcaacgcac cgtaaaaaat caggattgat
     2041 gacggtggaa tgattgggcc gatgatcgac gatgccccag tgatggcggc ggcgtagtca
     2101 aggctgtagc cgcgttgacg catctgtggc acgagtgcat taccaagtgc cgcggcatcg
     2161 gagacggccg atccggaaac ccctgcaaag aaaacactgg tcatgatgtt gacgtggcca
     2221 agaccacctt tcaaacggcc aaacaatgac atgcagaagt cgatcagcga cgatgccagc
     2281 cctgcgcggt tcatcaggtc gcctgcgaag atgaatagtg gcatcgcgag aaacgcaaaa
     2341 ttgtcgagtt gactgaacag tctttgaggt agcacggcca tgaagccagc cttatcggct
     2401 agccagaagg tgctaattgc agcggttccg ataacgtacg caatcgcgcc gccagcaaaa
     2461 ataccaacca acacgacacc aatgacaatg ggaccgtaca tgctttcgga gtcacttaga
     2521 cattgtcaca ttgcacaacg tcttaattaa gccaactttc ttttatcacg taggtcgaca
     2581 ttcgggctca aaaaaaacct gatttaggga aagcccttat gatctatttt taacgaggtc
     2641 gaagatggaa aagcgtgcct gacccgcgag tcatctgttg cacgcactga gatgtacttt
     2701 gcaacaaatc taactgcttc tctaaagaga acgccgcttt tgccattgct caagcaatgt
     2761 ccgtgcctct tgattgtcga gctttaggtg ctcatcgtgg ccgggctttt tagcgcacag
     2821 ttcaatcacg tacccattgg ggtcacggaa atagatcgaa tcaataaatc cgtggtcaga
     2881 tacgccacgc gtgtcaatgc cacaatcttt gcccttttgt agcatctgtt gcaggtagtc
     2941 aggctcgact tcaagtgcga tgtgcaaatc aaaatcgtgc tgtgatttga attcaaacgg
     3001 cttgtctggc gcctcaaaaa atgccaggtg tgatccgtca gcaagctgat agaacgtatg
     3061 caagacctca gtctcgcgcc cagtcttggt ctgtgcgatt tttagtgcgc ccgcgagcgg
     3121 cagctccaga aagtcctcgt aaaacgcacg agtatcttct gaattggcgc agcgataagc
     3181 cgcgtggtgc aggcccttga ttgaggggtg ctgggtggtg tgatgggcgg tgttggtatc
     3241 cataatcctg attcctcgct tgtggcttgg ttaggttagt tccattttgc agcaaaggca
     3301 gggtgaacgc cggcataacc gcttggttgg cattgagatg caagttgtgc ctgggaccag
     3361 cacttgagca cttgggacat gcacttggga cattgcgccg gtctcgtaca gtcgctacag
     3421 taggactaat caaatatttt ggagcatcag tgatgccagt gatcccatgc aaaatattac
     3481 ccgggcagcg ttcagtgaca gaagtggtga accacttggt gtcagacata gtgagccgcg
     3541 cagttacccg ttccctgtgt gctttggtgc tcggggcagc cgtgtttgcc acacccgtgg
     3601 cccaagcatc tgacgatgac ggtgccgtgg ccacgattca agccgcgacc gtcaaacaag
     3661 tcttgcaaga cgaagtgcgt gtgacattta gcacgcaagc cacgggtaca actgcacctg
     3721 aggtcaatcg caagctcgct gccgcgctcg atggtgcgcg cgacgggttt cagataccag
     3781 atggggttga ggtgtcgaca ggcaacttca gtgtgtttct cgattacggc aaagacaacc
     3841 agcccaaagg ttggacaggg cgggcaagtt tggcggttgt gagtaccaat ctcgatgagg
     3901 cctcaacggt catcgagcat tttggtaaga gcttggcggt gtcttccttg cggttttctt
     3961 tgtcgcgcga ggcacgtcaa gcctatg
//
LOCUS       DATBNL010000478         1948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_35596, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000478 DATBNL010000000
VERSION     DATBNL010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35596"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1113)
                     /locus_tag="VIC30_08355"
     CDS             complement(<1..1113)
                     /locus_tag="VIC30_08355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016835546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY7804426.1"
                     /translation="MSALTTAFDMVLSSDVLIAMVGAALFGLFVGAVPGLTATMATAL
                     LVPVTFFLDPIPAVAVMVTATAMAIFAGDIPGCLVRIPGTPASAAYVDESHAMTKNGQ
                     AHTALGVALVCACLGGLFGTAVLIVAAPSLAEVALQFSSVEYFWLVLLGLTCAVFVSG
                     NSPLKGMVTLLLGLLLSGVGLQNPAAHPRFTFGNTDLLGGITLIPAMIGLFAISEILR
                     FAASREDIAKVKAQVGSVFKGMGKIIWRFKWQGLRGSALGTAVGALPGAGADIAAWMS
                     YAISRKTSKQQEKFGTGHPEGLVEAGSANSAALSAAWIPALVFGIPGDSITAIVIGVL
                     YMKSINPGPMIFITNPESIYAVFIIFILASLLILPLG"
     gene            complement(1120..1584)
                     /locus_tag="VIC30_08360"
     CDS             complement(1120..1584)
                     /locus_tag="VIC30_08360"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY7804427.1"
                     /translation="MKVNDGLIGLVLLLVSLATLWHVQDFPNIPGQTYGASLFPTVAA
                     AGLAICSILLMISGLRSGHGLIYGSQVTPTRSLTALFITAAVLVGYALLVDYLGFYIT
                     ASLALIVLMVTYGAKLKLAVPLGLTVTVVIHLAFYKLLGVPLPWGLLENYAW"
BASE COUNT          523 a          550 c          499 g          376 t
ORIGIN      
        1 acccaaaggc agaatcagga ggcttgccag aataaagatg ataaagaccg catagatact
       61 ttcagggttg gtaataaaga tcatgggtcc tgggttgata cttttcatgt agagaacacc
      121 gatcacgatc gccgtgatcg agtcgcctgg aatgccaaac accagcgcag ggatccacgc
      181 cgcggacaag gccgcactgt tggccgatcc ggcttcgacc aatccctcgg gatgacctgt
      241 gccaaacttt tcttgttgct tggaggtttt tcggctgatg gcgtaggaca tccaggctgc
      301 aatatcagcg ccggctccag gcaacgcacc cacagcggta cctaatgcac taccgcgcaa
      361 gccttgccat ttaaagcgcc agatgatttt gcccatgcct ttaaagactg aaccaacttg
      421 cgctttgact ttggcgatat cttcacggct agctgcaaat cgcaaaatct cgctaatggc
      481 aaacaagcca atcatggcgg ggatcagtgt gatgccacct agtaagtccg tgttaccaaa
      541 tgtaaaacgt gggtgtgcag ctggattctg caggccaacg ccgcttagca ataaacccaa
      601 taacaaggtc accatgcctt ttaagggcga gttgccgctg acaaacaccg cgcatgtcag
      661 ccctaggagt accaaccaaa aatactccac cgaactgaat tgcagtgcga cttctgccag
      721 tgagggtgct gccacaatca gcacagccgt gccaaataga ccacccaagc aagcgcacac
      781 caacgccacg ccgagcgcgg tgtgcgcttg accgtttttg gtcatggcgt gggattcatc
      841 gacataggcc gctgaggcgg gcgtgcctgg gatacgaacc aagcaaccgg gaatgtcgcc
      901 tgcaaatatc gccatggccg tggccgtgac catcacagcc acggctggaa tcggatccag
      961 aaaaaatgtc actggtacca gcagtgccgt ggccatggtg gccgtgagcc ctggcacggc
     1021 cccaacgaat agcccgaaca gtgccgcgcc caccatggca atcagcacat cgctactcaa
     1081 caccatgtca aacgcagtgg tcagtgccga catgttcagt taccacgcat agttttctag
     1141 caagccccag ggcagaggca cgccaagtag tttgtaaaaa gctaggtgaa tcacaaccgt
     1201 taccgtcaga cccaagggca cagcgagttt taacttggcc ccataggtga ccattaaaac
     1261 aatcaaggca agcgatgccg tgatgtaaaa gccgaggtaa tcaaccagta gcgcatatcc
     1321 caccaagaca gcggccgtaa taaagagggc tgtcagtgat cttgtggggg tgacctggct
     1381 gccatagatc aatccgtggc ctgagcgcag gccagaaatc atcagcaaga tcgagcaaat
     1441 ggccagcccg gccgcagcca ccgtgggaaa caatgaggct ccataggttt gccctggaat
     1501 gttggggaag tcttgcacat gccacaaggt ggctagagag actaataaca aaaccagacc
     1561 gatcagaccg tcattgacct tcatgcaaag acaccaagtt tgaacgcatg gataaaaaaa
     1621 gcggcggcgg ggcaaaaggg cggtaagagc caagaagcga ggatcaagtc aaaggcttgg
     1681 ctcgaattca agcccatgac aaatgactaa cctgaataac catccctcag tcccaacctc
     1741 ttaccgtacc ccgccgtgcc ccccagcact gcctggtcta cttggctaag cccacggcct
     1801 tgagcacgtt gcccttggca gtgtcttctt gctccataaa taccccaaac tcctgtggat
     1861 tggcccactg tgcaccaaac ccgcgcgatg ccaggaagtc tgcgtagtcc ttggattgat
     1921 aaatctcttc aagcgccgtg gccaatat
//
LOCUS       DATBNL010000479         3088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_115049, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000479 DATBNL010000000
VERSION     DATBNL010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115049"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VIC30_08365"
     CDS             complement(<1..839)
                     /locus_tag="VIC30_08365"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006221137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEY7804428.1"
                     /translation="MHTEMPNALSSDAASGSSSGSSTIEQAAQALLRGELVAFPTETV
                     YGLGADAANPVAVARIYAAKGRPSNHPVIVHVAKLEDITSWCSDIPDQAWRLADVFWP
                     GPLTLILKRHPDVDAAVSGGQATIGVRCPSHPVARELLTMFGKLKQQGNEARAGVAAP
                     SANRFGRVSPTRAQHVRSEFADLVAQGMPVLEGGDSEVGIESTIIDLSSVSSSGAPAL
                     LRPGAISAEQVAAVLGQAVIGHQASSPRVSGSLKAHYAPSTPLALCEPGERHERVSVW
                     LAA"
     gene            complement(839..2005)
                     /locus_tag="VIC30_08370"
     CDS             complement(839..2005)
                     /locus_tag="VIC30_08370"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEY7804429.1"
                     /translation="MIAAPGQWLGVLGAGQLGRMFCQSAQSMGYRVLVLDPEAEAPAV
                     DVADDHLVAAYDDAQALGEMAKRCVAVTTEFENVPARSLELLSRRTRVMPGARAVGPA
                     QDRSLEKRFIASMGVPVVPYADITSVADIEAASEGLFPGILKVARLGYDGKGQYRVST
                     REEAITAFNDAQNVPCVLEAKLELAYELSVVLARNAQGQQVTYPVARNIHHDGILAVT
                     HVDGCVDDLTIAAQKAAIEIAQGLGYHGVLCVEFFVLSDGRLIANEIAPRPHNSGHFT
                     MNACATSQFEQQARVMADLPLGDTRLLAPSVMLNLLGETWLSSDDAQPVEPDWSAVLA
                     KPGTSLHLYGKREARLGRKMGHINIIAEHFEQAVDVANEVVDILSLPVKALATP"
     gene            complement(2002..2463)
                     /gene="purE"
                     /locus_tag="VIC30_08375"
     CDS             complement(2002..2463)
                     /gene="purE"
                     /locus_tag="VIC30_08375"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009524200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEY7804430.1"
                     /translation="MGSSSDWDVMSQACEMLEQFGVPHEARVVSAHRMPADMAEYAQA
                     AQARGLRAIIAGAGGAAHLPGMVAAFTPIPVFGVPVPSKHLQGQDSLLSIVQMPKGVP
                     VATFAIGTARAANAALHVVANLATTDTALMARLVEFRASQTEAARAMRLSS"
     gene            complement(2658..>3088)
                     /locus_tag="VIC30_08380"
     CDS             complement(2658..>3088)
                     /locus_tag="VIC30_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014723567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEY7804431.1"
                     /translation="KAEVGEHDENVDFDYVIKAIGESLAVEIREITLRLYREAADYAA
                     SRGIIIADTKFEFGLDANGQLHLMDEVLTPDSSRFWPAVSWQAGTSPPSYDKQFVRDW
                     LETQPWDKTAPAPKLPADIIEATAAKYREALDQLSGSIKS"
BASE COUNT          701 a          939 c          824 g          624 t
ORIGIN      
        1 tgagccgcta accagacgct gaccctctca tggcgctcgc cgggctcaca cagtgccagc
       61 ggcgtgcttg gcgcgtagtg cgctttcaac gaccctgaca cccgggggga agaggcttgg
      121 tgcccaatca cagcctgacc aagcaccgct gccacctgct cggcgctaat cgcaccaggc
      181 cgcagtaacg ctggcgcacc acttgaactg acagacgaca gatcgataat cgttgactca
      241 ataccaacct cactatcacc gccttccagt acgggcatgc cttgcgccac gaggtcagca
      301 aactcgctgc gaacatgctg cgcccgggtg ggtgacactc gaccaaatcg gttcgccgat
      361 ggtgctgcta caccggcacg tgcttcgttg ccttgttgtt ttagcttgcc aaacatcgtc
      421 agcagctcac gcgccaccgg gtgcgaggga caacgcacac caatcgttgc ttgaccgccg
      481 ctgactgcgg cgtccacatc gggatgtcgt ttgagaatga gggtcagcgg cccaggccaa
      541 aacacgtcgg ccaagcgcca agcttgatcc gggatgtcgc tgcaccagga tgtaatgtcc
      601 tcaagcttgg ccacatgcac aatgacaggg tgattactcg gcctgccttt ggccgcatag
      661 attcgtgcca ccgcaaccgg gttggcggca tcagccccta agccataaac cgtctcagtt
      721 gggaatgcga caagctcgcc acgcagcaga gcttgagccg cctgttcaat agtggacgag
      781 ccagaagaag agccagaagc agcgtcagat gacaacgcat tgggcatctc ggtgtgcatc
      841 agggcgtggc caacgccttg acaggcagac tcaaaatatc aaccacctca ttggccacat
      901 cgacagcctg ctcaaagtgc tcggcaatga tattgatatg gcccatcttt ctgccaaggc
      961 gagcttcacg tttgccatac agatgtaggg atgtgcccgg tttggccagc accgcagacc
     1021 agtctggctc aacgggttgg gcatcatcgg atgaaagcca agtctcacca agcaaattga
     1081 gcatcaccga gggtgccagc aaacgcgtgt cgccaagcgg cagatcagcc atgacacggg
     1141 cttgctgttc gaactggctg gtggcacaag cattcatggt gaagtgacca ctgttgtgtg
     1201 ggcgtggcgc gatttcattg gcgattagac gcccatcgct caacacaaag aactcaacgc
     1261 acaagacacc gtgataacca agcccttggg caatctcaat ggctgctttc tgtgcagcga
     1321 tcgtcaaatc atcgacacaa ccatccacgt gcgtcaccgc aagtatgccg tcgtgatgga
     1381 tgttgcgtgc aaccggatag gtcacttgct ggccttgggc gttacgcgcc aacaccactg
     1441 acaactcgta cgccagctcg agtttggcct caagcacaca aggcacgttt tgtgcatcgt
     1501 taaaagcggt gatagcttct tcgcgagtcg acacacgata ctgaccctta ccgtcgtaac
     1561 ctaggcgagc gacttttaaa atacctggaa acaggccttc ggaggctgct tcaatatcgg
     1621 ccacgctagt gatatcggca tatggcacaa ccggcacacc catggatgcg ataaagcgct
     1681 tctctagact acggtcttgc gctggaccaa cggcgcgcgc gcctggcatg acgcgtgttc
     1741 gacgtgagag caactcgagg ctgcgcgccg gtacattctc aaactcggtg gtcaccgcca
     1801 cgcagcgctt ggccatctca ccgagtgctt gcgcgtcgtc ataagccgcc accagatgat
     1861 catcggccac atcaacggcc ggtgcctcgg cctcggggtc gagtaccaac acccgatagc
     1921 ccatggactg cgcagattga cagaacatgc ggccgagttg gcccgcccct aacacgccta
     1981 accattggcc tggtgctgcg atcatgatga caacctcatg gcgcgcgcag cctcagtctg
     2041 gctggcacga aactcaacca aacgagccat gagtgccgtg tcggtggtgg caaggttggc
     2101 caccacgtgc aaggcggcat tggcagcgcg cgctgtaccg atagcaaagg tcgccaccgg
     2161 cacgcctttg ggcatctgta cgatcgacaa tagcgagtct tgtccctgca aatgtttgct
     2221 tggcaccggc acgccaaaca ccggtatcgg cgtaaacgcg gccaccattc ctggtaagtg
     2281 tgcagcacca cctgcacccg cgataattgc ccttaaacct ctcgcctgcg ctgcctgagc
     2341 gtactcggcc atatcagccg gcatgcgatg ggctgacacc acgcgagcct cgtggggcac
     2401 accaaactgt tctagcatct cgcaggcctg cgacatcacg tcccagtcac ttgaagagcc
     2461 catgatgacg cctaccagag gcttatcgac cggctgacga tcggcgggat tacctgcaac
     2521 tgactcagct attgaattag ccataaatag gtcattccaa cgggtaaagg gttctatttt
     2581 agccttgctc gtggcaagac gatgccgccc atgataaggc cggcctttga tagacaaatt
     2641 acacgaccgc ggatcgtcta agacttaatc gatccgctca gctgatcaag tgcctcgcga
     2701 tactttgccg cagttgcttc gataatgtca gccggcagtt tgggcgctgg tgctgtttta
     2761 tcccatggct gggtctcaag ccaatcccgc acaaactgct tgtcgtacga cggtgggctc
     2821 gtgcccgctt gccaactcac cgctggccaa aacctggatg aatccggtgt aagtacctca
     2881 tccataagat gcagttgacc attcgcatca agaccaaact caaacttggt gtcagcaatg
     2941 atgatgccgc gactcgcggc atagtctgcc gcttcacgat ataagcgcaa cgtgatttct
     3001 cggatttcaa cggccaaaga ctcaccaatg gccttgatca cgtagtcaaa atcaacattc
     3061 tcatcgtgct cgccgacctc ggctttgg
//
LOCUS       DATBNL010000480         1841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_65704, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000480 DATBNL010000000
VERSION     DATBNL010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65704"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VIC30_08385"
     CDS             <1..609
                     /locus_tag="VIC30_08385"
                     /inference="COORDINATES: protein motif:HMM:NF037007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY7804432.1"
                     /translation="QDTRASLLQAAVTVFAESGLSGGSVSRIAKKANSHDRMIYYYFG
                     NKEGLFVAALEEIYRQYNAAESAVTLDLEQPITALQQAVTFFVRYFRDHPEFVTVLNS
                     ENLHRGKHISQSLLASQFSKPAIGLVQRALVAGQQAELFRQDVSPRDIYVMISAMGYF
                     YQSNQYTLSAFLGEPLSAPDRYAQWESFVVDAVFRTVTAQVH"
     gene            657..1316
                     /locus_tag="VIC30_08390"
     CDS             657..1316
                     /locus_tag="VIC30_08390"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY7804433.1"
                     /translation="MTTQLIIVRHGQTDWNVERRIQGWRDIDLNDNGRQQAQRLAAYL
                     AHPNSKHAPINAIYTSDLLRARHTAKAVADQLQVPLNVVQGVRERNYGILEGVPFDQM
                     HKHHPEVAQIWKSRDPDGVIPQGETLRTFHERVTGTLQEIAQRHQQQRVMVVTHGGAM
                     DIIWRAATGEPLEAPRKTVFLNASINRIAITMSDDGFQWALHEWGDISHLEDADNDVV
                     A"
BASE COUNT          464 a          516 c          460 g          401 t
ORIGIN      
        1 caagacaccc gggctagcct gctgcaggct gctgtcacgg tgtttgccga gtcaggtcta
       61 agcggcggca gcgtctcgcg catcgctaaa aaagccaatt cgcatgaccg catgatctat
      121 tactacttcg gtaacaaaga gggtttgttt gttgccgcac tcgaagaaat ctataggcaa
      181 tacaatgcag ccgagtcagc ggtgacgcta gatctcgagc agcccattac ggcattgcaa
      241 caggcggtga ccttctttgt gcgctatttc cgcgaccacc cagagtttgt gaccgtactc
      301 aacagtgaga acctgcaccg cggcaaacac atcagtcagt cgctgctggc tagccagttt
      361 tctaaaccag ccattggttt ggtgcagcgt gcactcgtgg cgggccagca agccgagctg
      421 tttcgccaag acgtctcgcc tagggatatt tacgtcatga tttccgccat gggttacttt
      481 taccaatcga atcagtacac tctgtcggca ttccttggcg aacccttaag tgcacctgat
      541 cggtacgcgc agtgggagtc gtttgtggtt gacgcggtgt tcagaaccgt gaccgctcaa
      601 gtccactaga tcgcaagcct tgccacaaca accctcattt cagcagcaat ttctacatga
      661 ccacacaact gatcatcgtg cgccacggcc aaactgactg gaatgttgag cgacgaatcc
      721 aaggctggcg cgacatcgac ttgaacgaca acggtcgtca acaagcacaa cgtctggcag
      781 cctatctggc ccaccccaac agcaagcacg cccctatcaa cgccatatac accagtgacc
      841 ttttaagggc acgccacacg gccaaagcag tggccgatca attgcaggta cccttaaatg
      901 tggttcaagg cgtgcgtgag cgtaactacg ggatcttaga aggcgtgccg tttgaccaga
      961 tgcacaaaca ccaccctgaa gtggcgcaaa tctggaaatc acgcgatccc gatggcgtca
     1021 tcccgcaagg cgagacctta aggacgtttc atgaacgagt aaccgggaca ctccaagaaa
     1081 tcgcccaacg ccatcaacaa caacgcgtca tggtggtcac tcacggcggt gcgatggaca
     1141 tcatctggcg tgcggcaact ggcgaaccgc tcgaagcccc acgcaaaacc gtgtttctga
     1201 acgccagcat taaccgaatc gccatcacga tgtcggatga tggtttccag tgggcacttc
     1261 atgaatgggg tgatatcagt caccttgagg atgccgacaa cgacgtggtg gcctagaaag
     1321 attgtgctgg gcgggctgtg ctgggtgcac gttgcaaccc aatgcaggca agtgcagaca
     1381 agtgaaacca aatacaacgt accgaacggt gactaacaaa cacttacggt tcgatcttcg
     1441 ctttttttct taagtgattt gagcgacatt gcggttttaa accataatga cgttcatttt
     1501 tattttggag agtaccatgc gtgtttctgc taaaggactc aaagcgctcg cccgaatagt
     1561 gggcatacca cggcaaaccc aacgaaaaag gcatgccggt ctgcgtcgtt taatcgcggc
     1621 tggcagtctc acatggaatg gcggcaagcc taagtttgca ccaccccttt ctctttccag
     1681 cgctctttca actgagcttt ccactaatgg aaagtccatc agcaaaatgg tggtcgagga
     1741 tcgagagtga ccggtgtttg cgacaccttc ttctgttaac accccctgag acaaggcaaa
     1801 catcactcac ctaaaccatc gccacgaacc gggctctacc a
//
LOCUS       DATBNL010000481         2161 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_135382, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000481 DATBNL010000000
VERSION     DATBNL010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135382"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VIC30_08395"
     CDS             <1..184
                     /locus_tag="VIC30_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011800146.1"
                     /note="possibly involved in transport of pyrroloquinoline
                     quinone transport; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein B"
                     /protein_id="HEY7804434.1"
                     /translation="LPQSGAAGMLEALKKLPQATRKILIHINNSNPILNEQGPEREAL
                     TQAGIEVAYDGIEIWF"
     gene            196..927
                     /gene="pqqC"
                     /locus_tag="VIC30_08400"
     CDS             196..927
                     /gene="pqqC"
                     /locus_tag="VIC30_08400"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEY7804435.1"
                     /translation="MHNTPPPTEALDRDAFEAALRAKGTAYHIHHPFNVRLNTGQCSP
                     AEVRTWIANRFYYQVCIPRKDAAVMANMPDRAERRLWILRMLDQDGHGDYQGDQAGGI
                     ESWIRLGQAAGIDREQLTSLELVVPGVRFACDAYVNFARQAPWQEAVCSSLTEMFAPQ
                     IHKDRLATWPEHYPWIEAQGLSYFRSRIPLASRDVEHGLRVTLDHFKTVSQQQRALDI
                     LQFKLDILWTMLDAIERACGEHANG"
     gene            920..1222
                     /gene="pqqD"
                     /locus_tag="VIC30_08405"
     CDS             920..1222
                     /gene="pqqD"
                     /locus_tag="VIC30_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016354216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEY7804436.1"
                     /translation="MVDATKRDSEPIGANDHNWQPQLASGMRLQFEQAQDAWVLLYPE
                     GMVQLNTSAAEILRRCDGTKTITAIVTELQALFNVSGIESEVQQLAQEAKRRGWLI"
     gene            1206..>2161
                     /gene="pqqE"
                     /locus_tag="VIC30_08410"
     CDS             1206..>2161
                     /gene="pqqE"
                     /locus_tag="VIC30_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018437362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEY7804437.1"
                     /translation="MAGSSDTDQADTKPPFWVLAELTYQCPLHCVFCSNPVNMASRAS
                     ELSTAQWKDALTEARAMGAVQLGFSGGEPLVRDDLEVLVAHAHELGFYTNLITSGVGL
                     TEARAKALKSAGLDHVQLSFQDSTQELNDFLSHTRTFDLKQRVAKLIKEQGWPMVMNV
                     VLHRHNVDHIDKIIDMALALDAQYLELANTQYYGWAFKNRLALLPSREQLVKAEAVVN
                     DYRARIGSRCQLIFVVPDYFEERPKACMNGWGKVFLAIAPDGVAMPCHAARELPGLDL
                     PNVIQSNLHDIWYESAAFNAYRGQKWMAEPCRSCDERDKDFGG"
BASE COUNT          513 a          625 c          570 g          453 t
ORIGIN      
        1 cctgccgcaa tcaggagctg caggcatgct tgaggcgctc aaaaaactgc cccaagctac
       61 ccgcaaaatt ctcatccata tcaacaacag caatcccatt ctgaacgaac aagggcctga
      121 gcgcgaggca ctgacacaag ccggcatcga agtggcgtac gatggcatcg agatctggtt
      181 ttaggtgata tagctatgca caacacgcca ccaccgaccg aagcactaga tagagacgcc
      241 tttgaagcag cgctgcgtgc caaaggcacc gcttaccaca tccatcaccc gttcaatgtg
      301 cgcctgaaca caggtcagtg ttcgcctgct gaggtacgca cctggatcgc caaccgcttc
      361 tactatcaag tctgtattcc acgcaaagat gcagctgtta tggccaatat gcctgatcgc
      421 gccgagcggc gtttgtggat cttgcgcatg ctcgaccaag acggtcacgg cgactatcaa
      481 ggcgaccagg ccggtggcat cgaatcgtgg attcgcctag gacaagccgc tggcatcgat
      541 cgcgaacaac taacgagcct agagctcgtg gtacccggtg tgcggtttgc atgcgacgcc
      601 tatgtcaact ttgcacgtca agcgccatgg caagaagcgg tctgctcgtc tttgactgaa
      661 atgtttgcgc cgcaaattca caaagaccgc ctagccacct ggccagaaca ctatccctgg
      721 atcgaggccc aagggttgtc ttacttccgt tcgcgtatcc cgctggcatc gcgcgacgtt
      781 gagcatggct tgcgcgtcac tttggatcac ttcaagacgg tcagccaaca acagcgcgca
      841 ctcgacattc tgcagttcaa gctcgatatt ctatggacca tgctcgatgc catcgagcgc
      901 gcctgtggcg agcacgcaaa tggttgatgc gaccaagcgc gatagtgagc cgatcggtgc
      961 caatgaccat aactggcaac cgcaactggc tagcggcatg cgcctgcaat ttgaacaggc
     1021 ccaagacgct tgggtgttgc tgtatccgga aggaatggtg cagttaaaca cctcagccgc
     1081 agagattttg cggcgctgcg atggcactaa aacgatcacc gccatcgtca ccgaactcca
     1141 agccctgttt aacgtcagtg gcatcgaatc cgaggtccaa caactggctc aagaggcaaa
     1201 gcgtcgtggc tggctcatct gataccgatc aggccgacac aaagccgccg ttctgggtat
     1261 tagccgagct cacctaccaa tgtccgttgc actgtgtgtt ctgttcaaac ccagtcaaca
     1321 tggcttcacg ggccagcgag ctcagcaccg ctcagtggaa agacgcattg accgaagcac
     1381 gcgccatggg cgccgttcaa ctcgggtttt ctgggggtga accgctggta cgcgatgatc
     1441 ttgaagtctt ggtcgcgcac gcccatgagt tgggtttcta caccaatctc attacctccg
     1501 gtgtgggtct gaccgaggca cgcgccaaag cactcaagtc cgctgggctt gatcatgtcc
     1561 aactgtcgtt tcaagactcc acgcaagaac tcaatgactt tttaagtcac acgcgaacat
     1621 ttgacttaaa gcagcgcgtg gccaaactga tcaaagaaca ggggtggccc atggtgatga
     1681 acgtggtact acaccgccac aacgtagatc acatcgataa aatcatcgat atggcactgg
     1741 cactcgatgc tcagtatcta gagctcgcca acacccagta ctacggctgg gcctttaaaa
     1801 accgtctggc actcctaccc tcacgcgagc aacttgtgaa agccgaagca gtggtcaacg
     1861 actatcgcgc tcgcattggc agccgatgcc aactgatttt tgtggtgcct gactacttcg
     1921 aagagcgccc caaggcctgt atgaacggtt ggggcaaggt gtttttagcg atcgcacccg
     1981 atggcgtggc catgccctgt cacgccgccc gtgagttacc cggacttgat ttgcccaacg
     2041 tcatacagag caacctgcac gatatttggt atgagtctgc ggcatttaat gcctaccgtg
     2101 gccaaaaatg gatggccgag ccgtgtcgat cctgtgatga gcgcgacaag gactttggtg
     2161 g
//
LOCUS       DATBNL010000482         2731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_135388, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000482 DATBNL010000000
VERSION     DATBNL010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135388"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..623
                     /locus_tag="VIC30_08415"
     CDS             <1..623
                     /locus_tag="VIC30_08415"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY7804438.1"
                     /translation="WGVFAPTRHEYLDLVMQADMPKSCHSAVDVGTGTGVLALLLAKR
                     GIQRIVATDTNPSAILCAADNVARAGRQDNISVIDSGMLPKGRFDLLVCNPPWLPGAA
                     SGPLEAAVYDPKHQMLRGFLAQAAQHLNPGGQAWLILSDLAEHLQLRSRQTLLDWIAA
                     AGLGIHQRLDVKPRHHKVPDATDPLAQARGAEVTSLWQLCSLDEMP"
     gene            complement(580..1203)
                     /gene="mog"
                     /locus_tag="VIC30_08420"
     CDS             complement(580..1203)
                     /gene="mog"
                     /locus_tag="VIC30_08420"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005665144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HEY7804439.1"
                     /translation="MTDSTGKDLNKPLQIGLVSISDRASQGVYADQGVPSLKTWLEGA
                     LTSPFVVHERLIADERSEITATLIELVDQACCDLVLTTGGTGPSRRDVTPEATLDAAT
                     REMPGFGEQMRQISLQFVPTAILSRQVAVLRETDDHAALIINLPGQPRAIAQTLEGLK
                     DDNGQVLVSGLFAAVPYCIDLIGGPFIETNPDVVRAFRPKNKAAKAT"
     gene            1456..>2731
                     /locus_tag="VIC30_08425"
     CDS             1456..>2731
                     /locus_tag="VIC30_08425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HEY7804440.1"
                     /translation="MDAAMEYAIDAWQRGVLTADVMRQRGNQYQRHVAKQAPNVLSMK
                     AEVILDGRTLERPVNYILTRITPPKNTPTDPIKRPFVVVDPRAGHGPGIAGFKPESEI
                     GVAIEAGHPCYFIGFLPRPEPEQGVEDVVWAEARFLEEVIALHPKAEGKPVVIGNCQA
                     GWQLMMAAATRPELFGPIIIAGAPLSYWAGWRGKNPMRYSGGLAGGSWMTMMASDLGG
                     GLFDGANLVQNFENLNPANTYWSKQYNLYSRVDTEATRYLGFERWWGGHVFLNGKEIQ
                     YIVDNLFVGNKLSTARMVTQDGLRIDLRNIRSPIIVFCSKGDNITPPPQALGWITDLY
                     QTDKEVLAHGQTIIYAVHESIGHLGIFVSGAIAKKEHREFTCNIDMIDVLPAGIYEAV
                     IHDKTPDTPNADLAYGDYVLTFERRHLEDVEKI"
BASE COUNT          638 a          748 c          729 g          616 t
ORIGIN      
        1 gctggggcgt gtttgcgccc acccggcatg aatacctcga tttagtgatg caagctgaca
       61 tgcccaaatc ctgccattcg gccgttgacg tgggtacggg gaccggggtg ttggctctct
      121 tattggccaa gcgcggcata cagcgcattg tggcaacgga caccaacccg agcgccatct
      181 tgtgtgctgc tgacaatgtg gcgcgagccg gcagacaaga caacatatcg gtgattgaca
      241 gcggtatgtt gcccaaaggg cgatttgatt tgttggtctg caacccgcct tggctgcctg
      301 gtgcagccag cgggccacta gaggcggctg tctatgaccc caagcaccag atgcttcgcg
      361 ggtttttagc gcaagccgcc cagcacctga atcccggtgg gcaagcctgg ttgattctgt
      421 ctgatttggc cgaacacctg cagttgcgca gccgacaaac gttgcttgac tggatcgcag
      481 cggcaggcct tggcatccat cagcgtctcg atgtaaaacc acgtcatcat aaagtccctg
      541 acgccacgga tcccttagcc caagcacgtg gggcggaagt tacgtcgctt tggcagcttt
      601 gttctttgga cgaaatgccc taaccacatc tgggttagtt tcaataaagg ggccaccaat
      661 taagtcgatg caatacggta cagcagcaaa taagccagat accaatactt ggccattgtc
      721 gtctttgagc ccttccaatg tttgcgcaat cgcgcggggc tggcctggaa ggttgatgat
      781 taaggccgca tgatcgtcgg tttcacgcaa cacagccacc tggcgcgaca aaatagccgt
      841 tggtacgaat tgcaaactga tttgacgcat ttgttcacca aacccgggca tctcccgggt
      901 tgcggcgtct aaggtcgcct cgggcgtcac gtcgcgacgg gacggacccg tgccaccagt
      961 ggtgagcaca aggtcacagc aggcttgatc caccaattca atcaatgtgg cggtaatttc
     1021 agaccgttca tcggcaatca aacgctcgtg caccacaaac gggcttgtta aggcgccctc
     1081 tagccaagtt ttaagcgatg gcacgccttg atcggcatat acgccttgcg aagctctgtc
     1141 agagatggaa acgagaccga tttgcaaagg tttgtttagg tctttgccgg tagaatctgt
     1201 catacagcat tccttcgagc ggactgctca tcgattacgc aggagttacc cacgaaaaac
     1261 tgttaattta actcagtcga ggtcaactaa attaaccaga gggtgaccta aaaccacacc
     1321 aaaactttga ttttgttgca ttgcaacatg atttcaggtg taattcgtat accaactttt
     1381 ttgaggttta agcccgtgag ccaaaccgac acatcttcca agaacgagca cccttttcca
     1441 ttgctgccac ccgtaatgga cgctgccatg gagtacgcca ttgatgcgtg gcaacgcggc
     1501 gtgctaactg ccgatgtgat gcgtcagcgt ggcaaccagt atcaaaggca tgtcgccaag
     1561 caagcgccca atgtgctgag catgaaagcc gaggtgatcc tcgatggccg cacacttgag
     1621 cgtccagtga actacatctt gacacggatc accccaccaa agaacacacc cacggatcca
     1681 atcaaaagac cgtttgtggt ggttgatcct cgcgcgggtc atggccccgg tattgctggc
     1741 tttaagccag aaagtgaaat tggcgtggcc atcgaagccg gccatccctg ttacttcatt
     1801 ggctttttgc cgcgcccaga gcccgagcaa ggcgtcgaag acgtggtttg ggccgaagcg
     1861 cggtttctag aagaagtcat cgccttgcat ccaaaggccg aaggcaaacc tgtggtcatt
     1921 ggtaattgtc aggccggctg gcagctcatg atggcagctg caacccgccc cgagctattc
     1981 ggtcccatca ttattgccgg tgcacctctg tcttactggg ctggctggcg cggcaagaac
     2041 cccatgcgct attcaggtgg acttgccggt ggctcatgga tgaccatgat ggccagtgac
     2101 ttgggcggcg gcttgtttga tggcgccaat ctggtacaaa acttcgagaa cctgaaccca
     2161 gccaacacgt actggtccaa gcaatacaac ctctattctc gtgttgacac cgaggctacg
     2221 cgctacctcg gttttgagcg ttggtggggt ggacacgtct ttctgaacgg taaagaaatc
     2281 cagtacatcg ttgacaatct gtttgtcggc aataagctgt cgaccgcccg catggtcacg
     2341 caagacggct tgcgcatcga cttgcgcaac atccgctcac ccatcatcgt gttctgctca
     2401 aagggcgaca acatcacacc gccaccacag gcactcggtt ggatcacaga cctgtaccaa
     2461 accgacaaag aagtgttggc ccacggccag accatcatct atgccgtgca cgagagcatt
     2521 ggtcatctgg gcatatttgt ctcaggtgcc attgccaaga aagagcatcg cgagttcacc
     2581 tgcaatattg acatgattga tgtgttgcct gcgggtatct atgaggcagt gattcacgat
     2641 aaaacgccag acacgcccaa cgcggatctg gcctacggtg actatgtgct gacttttgag
     2701 cgacgccacc tagaagatgt tgagaaaatc g
//
LOCUS       DATBNL010000483         4630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_85744, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000483 DATBNL010000000
VERSION     DATBNL010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4630
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85744"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1049)
                     /locus_tag="VIC30_08430"
     CDS             complement(<1..1049)
                     /locus_tag="VIC30_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804441.1"
                     /translation="MVPEPLSLAKELRPEYGRLTVLFWLLLVLGFILSGWYQVNQIVD
                     GDQLQMIKRGYEAAYLGLWPATGNAASVVGNVPGFFSTAVVAGPLLIWDSPYAPIVLL
                     MAMRLAGFLMIDAVIRDVFPGSAAMRVVAVLALWLNPWVQYDSLLYNPAYLLFCAGLH
                     LYTSWRMRFEVSFKWTFLHVLAIALAMQLHFSWPLLMFMSLYLWWRQLVRVNGWAVIA
                     VVMLALVSLAPYLSSLLSNPDLAHNPDPEARERYIGWGAVHVYPVLKSVIYWLRYAAW
                     AFPGKLVNDAGFDWLAHWQWLELSAVWAWRVAQYLLATITMVVALAANVVAFRTIRGY
                     WRRRDGTVTEATDWL"
     gene            complement(1137..2537)
                     /locus_tag="VIC30_08435"
     CDS             complement(1137..2537)
                     /locus_tag="VIC30_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804442.1"
                     /translation="MTQSEAHSNTTAARRKRESFASMSGVAVTVSIAAFDATIISTIL
                     PRVAQALNGMALYAWAGTGYFLACSVSILIFGRLGDLYGRKRLMLLSLVLVGLGSALS
                     GLSQSMGQLIAFRVLQGVGGGMMIATAFAAPVDLFPDPKERVRWMVMLSVMFAVASGI
                     GPVLGGLVTQSLGWRAAFFLIPVTAVLALVLIWRYFPMIRPERRGPIKLDWAGSILLA
                     FAVGAPLVGLEFLTMGSSVVPTWVAVAFIASAAVAGFWLLRVERSVDTPMFPLRVLEP
                     KQMRYLNFAALLAGAVMFVLIYYIPLLLQDVFGFSPTRAGFVIVPLVAGIPIGSIING
                     RLFPRETNPQRLMVFGSVLLTLGCLAALTFSEQTSQTMMLVTMGLCGLGLGFLLPNFT
                     LFSQIIAEREDAGIASALVQTTRALGSAVGTAIVGMIIAEMTIQSGLRIGLVATVIAS
                     VLIGGLTSRVKMNSYT"
     gene            complement(2684..3355)
                     /locus_tag="VIC30_08440"
     CDS             complement(2684..3355)
                     /locus_tag="VIC30_08440"
                     /inference="COORDINATES: protein motif:HMM:NF013122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY7804443.1"
                     /translation="MFDKWLGHKHEGEPVPHTDAYELVGTHRWVVLDTETTGLNIRHD
                     RIISIAAVAVHVEPDLTDAHIPLVDTFEAVIHQDHPKAKKDNILIHHIGVGEQGNGQA
                     QPDVLDAFAHWVGDSPLFAYHAPFDKGMLEHAMKECGKKPLTNVWVDVQPLANWSVRE
                     TYPLGLDECVERFSLESISRHSAASDTFVTAELLLRLLPKIREAAIDFKQLQQLASQN
                     TMRPY"
     gene            complement(3345..>4630)
                     /locus_tag="VIC30_08445"
     CDS             complement(3345..>4630)
                     /locus_tag="VIC30_08445"
                     /inference="COORDINATES: protein motif:HMM:NF021824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /protein_id="HEY7804444.1"
                     /translation="VIDADDGLVGILTRYDLLKRVVLAQIDLNVPISAVMTANLKTLS
                     ADDTVEAAASLMMHESIRHVPVLKDQKVIGLISERDLFTFQRFSVGNIGAEIRAAHTL
                     ASLVVASGHIRQYAKNLLSQGVTGHRLTGLVSYLNDALTDQLIKITAAKHNIDTNQFC
                     WLALGSEGREEQTIATDQDNALIVPDDTSDAAMQHFLSFAREVNEGLDACGFPLCKGN
                     VMASNPDYCHRRREWIARCANWIDAGSPQDMLDSSIFFDFRPISGNQALVEPLTRFVA
                     DSAAKTPRFIALLATNAMKWKVPLTMFGGIDTEKIGGKPAIDIKLHGTALVVDFARIY
                     ALAKGITERNTKSRLEAVAKALGYDEARAADWVSTFEFLQTLRLKAQMDEQPLGGNPN
                     AVAMSALSKVDQVILKAAFNVMRSMQHRLRLDYVR"
BASE COUNT         1235 a         1349 c         1140 g          906 t
ORIGIN      
        1 aacagccaat ctgtggcttc ggtaacggtg ccatcgcgtc gacgccagta acctcgaatg
       61 gttctgaaag ccacaacgtt ggccgccaat gccaccacca tcgtgatcgt ggccaataga
      121 tattgggcga ctcgccaggc ccagactgcg ctcaactcca accactgcca gtgcgccagc
      181 caatcaaaac ccgcatcgtt aaccagcttg cctggaaacg cccaagcggc atagcgcaac
      241 caataaatca cggacttcaa caccgggtac acatgaaccg cgccccagcc gatataacgc
      301 tcgcgtgcct cgggatcggg attgtgagcc aagtcgggat tcgagagcaa ggaactgagg
      361 tagggcgcaa gtgaaacgag tgccagcatc accacagcaa tcaccgccca cccgttcacc
      421 cgcaccagct gtcgccacca aagatagagg ctcatgaaca tcagcagcgg ccaagaaaaa
      481 tgcaactgca tggccagcgc gatggccagc acgtgcaaaa acgtccactt gaaactcacc
      541 tcgaaccgca tgcgccagga ggtatacaaa tgcaggccag cacagaaaag cagataagcc
      601 gggttgtata gcaagctgtc atattgcacc catgggttta gccacaacgc caagaccgcc
      661 accacccgca tggctgcaga gccggggaat acatcacgaa taaccgcatc aatcatcaaa
      721 aaaccggcta ggcgcatcgc catcaacaac acaatgggtg cgtatggcga gtcccagatc
      781 aataggggac cggccaccac cgccgtagaa aagaaccccg gcacattacc gaccacgctt
      841 gcagcattac cggtcgctgg ccacaggcct aggtaggcgg cctcatagcc gcgcttaatc
      901 atctgcagct gatcaccatc gacaatctgg ttgacttggt accagccaga cagaatgaag
      961 cctagtacaa gcaacaacca gaacaaaacg gttagtcgcc cgtactcggg tcgcagttct
     1021 ttggctaagg aaagaggttc aggtaccact taatgtcaac gaatcatgtc agaggctgca
     1081 ttgtagtttg ctcggatcag ttacagcgca gctaggctaa gcaggatccc gtgaacttag
     1141 gtgtaactgt tcatcttcac gcgcgaggtc aaaccgccaa tgagcacact ggcgatcaca
     1201 gtggcaacca aaccaatgcg cagacccgac tgaatcgtca tttctgcgat gatcatgccc
     1261 acaatggcag tgcccacggc actgccaagc gcacgcgtgg tttgcaccaa cgctgacgca
     1321 atgccagcat cttcgcgctc ggcaatgatc tggctaaata acgtgaaatt gggcaataaa
     1381 aatcccaacc ccaatccaca aagacccatg gtcaccaaca tcatggtctg cgatgtttgc
     1441 tcgctaaagg tcagtgccgc tagacacccg agggttaaca acacgctgcc aaacaccatc
     1501 aggcgctgag gattggtctc gcgtgggaac aaacgaccat tgatgatgct gccaatcggg
     1561 atgcctgcca ctagcggcac gattacgaaa ccagcacgcg ttggactaaa gccaaagacg
     1621 tcttgcaaca acagtgggat gtaataaatc agcacaaaca taaccgcgcc agccagcaac
     1681 gcagcaaagt tcaggtaacg catttgtttg ggttcaagta cgcgtaatgg aaacatcggc
     1741 gtatcaaccg atcgctcaac gcgcaaaagc caaaaccccg ccacggccgc gctggcaatg
     1801 aaagccaccg ccacccaagt cggtacgacg ctactgccca tggtgagaaa ctccaatccc
     1861 accaaaggcg cgcccactgc aaacgccaac aggatggacc ctgcccaatc gagcttgatg
     1921 ggcccgcgtc gctcagggcg aatcatcggg aaataccgcc aaatgagcac caacgccaac
     1981 accgcagtga ccggaatcag aaagaatgcc gcgcgccacc ccaacgactg ggtaacgaga
     2041 ccaccaagta ccggaccgat cccgctggcc acggcaaaca tcacggacaa catcaccatc
     2101 cagcgcacgc gctctttggg gtcaggaaac aaatccaccg gggcagcaaa tgcggtggcg
     2161 atcatcatgc ccccgcccac gccctgcaga acccggaagg caatcagctg ccccatggat
     2221 tgggataggc cggataacgc cgagccaaga ccaaccaata ccaaggacaa cagcatcaaa
     2281 cgcttgcgac cataaagatc gccaagacgc ccaaaaatca gaatcgatac tgagcacgcc
     2341 agaaagtaac ccgtgcctgc ccaagcatac agagccatgc catttaaagc ctgggccaca
     2401 cgcggcaaga tggtgctgat gatggtcgca tcgaacgcgg caatcgacac tgtcactgca
     2461 acaccagaca tggaagcaaa cgattcacgc ttgcgtcgcg cagccgttgt gtttgaatga
     2521 gcctctgatt gcgtcatgag ttcacgcgtt gcatctctac tgatgaaact ggctaagcag
     2581 tgggcttagg catcaactaa gagattcagt ataggaccgc gaacaactgc aaggcgtttt
     2641 gttgggcaat atttgaactc acacccaaaa ccatggaagg agcctaataa gggcgcatcg
     2701 tgttttgtga ggccaactgc tgcagttgct tgaaatcgat cgctgcctcg cgaatcttgg
     2761 gcaacaaccg cagcaacaat tcggcagtca caaacgtgtc tgatgcagcc gaatgcctcg
     2821 aaatgctttc caagctaaag cgctccacgc actcgtcaag accaagcggg taggtctcgc
     2881 gcaccgacca gttcgctagc ggctgcacat caacccagac gttggtcaac ggtttcttgc
     2941 cacactcttt catggcgtgc tcgagcatgc ccttgtcaaa gggcgcatga taagcaaaca
     3001 gtggcgaatc gcccacccag tgcgcgaaag cgtctagtac gtcgggttgt gcttgtccgt
     3061 tgccttgctc accgaccccg atgtgatgga tcaagatatt gtcttttttg gctttcgggt
     3121 gatcctgatg aatcaccgcc tcaaacgtat cgacgagcgg gatgtgcgca tcagtcaaat
     3181 ccggttcgac atgcacagca accgcggcaa tggaaatgat gcggtcatgc cgaatgttca
     3241 agccggtggt ttcggtatca agcaccaccc accggtgtgt acccacgagc tcgtaggcgt
     3301 cggtatgcgg cacgggctca ccttcatgtt tgtgacctaa ccatttatcg aacatagtcc
     3361 agccttaacc gatgctgcat gctacgcatg acattaaaag cggctttcag aatcacctga
     3421 tccaccttac taagtgccga catggcaact gcattgggat tgccacctaa tggttgctca
     3481 tccatttgcg ccttcaagcg cagtgtctgt aagaactcaa aggttgacac ccaatcagca
     3541 gctctggcct catcataacc aagtgcttta gccactgcct ctagccgcga tttggtgttg
     3601 cgttcagtaa tgcctttggc taacgcatag atacgagcaa aatccaccac caaggctgtg
     3661 ccatgcaact tgatgtcgat ggccggtttg ccgccaattt tttctgtatc gataccaccg
     3721 aacatggtca atggcacctt ccatttcatg gcgttggtgg ctagtagcgc gataaagcgc
     3781 ggtgttttag cggctgagtc ggccacaaag cgggtcaaag gctcaacgag cgcttggttg
     3841 ccagatatgg gacggaagtc aaagaatatg ctggagtcca gcatgtcctg cggcgatccc
     3901 gcgtcgatcc aattcgcgca gcgtgcgatc cattcacgcc tgcggtgaca gtaatcgggg
     3961 ttactggcca tgacgttgcc tttacacaac ggaaacccgc aggcatcaag accctcgttg
     4021 acctcacgcg caaaagacaa aaaatgctgc atcgcagcat ctgatgtgtc gtctggcacg
     4081 atcagcgcgt tgtcctgatc cgtggcgatc gtctgctcct cgcggccttc ggagcccaat
     4141 gcaagccagc aaaattgatt ggtgtcaata ttatgtttag ccgcggtaat tttgatcagc
     4201 tgatcggtca gcgcgtcatt caagtagctc accagaccag ttaaccgatg gccagttaca
     4261 ccctgactta gtaagttttt tgcgtattgt ctaatatgcc cggacgccac cactaaagac
     4321 gccagcgtat gtgcggcgcg gatttcagca ccgatgttgc caaccgagaa gcgctgaaag
     4381 gtaaataaat cgcgctcaga aatcagccca atcacttttt gatcttttaa tactgggaca
     4441 tgacgaatcg actcgtgcat cataagactt gccgcggctt ccaccgtatc atcagcgctc
     4501 aatgttttta aattggctgt catcactgcc gagatcggca catttaaatc gatttgcgca
     4561 aggaccaccc gttttaataa gtcatagcgg gtcagaatcc ccaccaatcc atcatctgca
     4621 tctatcacga
//
LOCUS       DATBNL010000484         1721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_5456, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000484 DATBNL010000000
VERSION     DATBNL010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5456"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1221)
                     /locus_tag="VIC30_08450"
     CDS             complement(<1..1221)
                     /locus_tag="VIC30_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006394491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY7804445.1"
                     /translation="MNAPIDLSFIRENLQSRRTALVQEFRQKPNADRLVHELRRITDD
                     ALRQLLRLHPLPKQAALAAVGGYGRGELYPYSDVDLLILLDQAPSPQDEARLGELVAA
                     LWDLGIEPGYSVRTIDECLTEAESDITVQTCLLETRFISGRRKLVNAFNKAMISHLDP
                     KAFYRAKLAEMRQRHTRYQETPYALEPNCKESPGGLRDLQVIRWMAKAAGFGASWAQI
                     ARSGLLTTHEASDLRRAESAFKRLRVELHLLAGRREDRLVFDMQHALAQTYGLKATET
                     RRASEILMQRYYWAARLVTQLNTLLVQSIQESLFPVPDSEARPIDSCFYDLNGRLDVQ
                     DPDLFDKDPSQILRAFLVMQQNPELTAMTARTMRAIWHARRLIDAAFRRDARNKETFL
                     AILQQPQGIVHALRR"
     gene            complement(1232..>1721)
                     /gene="map"
                     /locus_tag="VIC30_08455"
     CDS             complement(1232..>1721)
                     /gene="map"
                     /locus_tag="VIC30_08455"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009457018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEY7804446.1"
                     /translation="IKDGWFGDTSRMYYVGEPSIAARRLTDTTYECMWLGIEQVRPGN
                     TLGDVGHAIQKHAEARGYSVVREFCGHGIGQQFHQDPQVLHYGRPKTGVKLEPGMIFT
                     IEPMINAGKRDIRQLADGWTVVTRDHSLSAQWEHTVLVTHDGFEVLTISEGMPARPAL
                     AA"
BASE COUNT          390 a          474 c          451 g          406 t
ORIGIN      
        1 gcgtctgagc gcatgcacaa tcccctgggg ttgctgcaag atagccaaga aggtttcttt
       61 attacgcgca tcgcgccgaa aggcggcgtc aattaagcgc cttgcatgcc aaatggcacg
      121 catcgtgcga gccgtcatcg cggtcagttc cgggttttgc tgcatgacca gaaaggcccg
      181 caaaatttgc gaagggtctt tgtcaaatag atccgggtcc tgcacgtcta ggcgaccatt
      241 tagatcgtaa aagcaactgt caatgggtcg tgcctcacta tcgggcacag gaaacagact
      301 ttcttgaata ctttgaacca gcaaggtgtt gagttgcgtc accagtcggg cagcccagta
      361 atagcgctgc atcaagattt cactggcacg acgcgtctca gtagctttga gtccgtaggt
      421 ctgcgccagg gcgtgctgca tatcgaacac caaacggtct tcgcggcgcc cagccagtaa
      481 atgcaattcc acacgcaatc gtttaaaagc cgattcggca cgacgcaagt cgctagcctc
      541 atgtgttgtt agcaatccgc ttcgtgcaat ctgtgcccag ctggccccaa aaccggccgc
      601 tttggccatc catcggatta cctgtaaatc acgcaaacca cctggagatt ctttgcagtt
      661 gggttcaagc gcgtaaggcg tttcctggta gcgtgtgtga cgctgccgca tttcagccaa
      721 tttggcccga taaaaagcct ttggatctag gtggcttatc atcgctttat taaacgcgtt
      781 gaccaacttg cgacgcccac tgataaagcg ggtttcaagt aagcatgtct gcaccgtaat
      841 gtcggattca gcctctgtca ggcattcatc aatggttcga acgctatagc caggttcgat
      901 acccagatcc cacaacgcgg ccaccagttc gccgagtcta gcttcatctt gtgggcttgg
      961 cgcttgatcg agcaagatca gcagatccac gtcagagtaa gggtacagtt caccgcgacc
     1021 gtatccaccg acagcagcta gcgctgcctg cttgggcaat gggtgcaagc gtagcaattg
     1081 acgcaacgca tcgtcggtga tgcggcgcag ttcgtgaacc aatcgatccg cgttaggctt
     1141 ttgacgaaac tcctgaacca gagccgttcg ccgactttgc aggttttcac ggataaagct
     1201 caaatcgatt ggtgcattca catccgcctc tttatgcggc caaggctggg cgagccggca
     1261 ttccctcgga aatggttagt acttcaaagc catcatgtgt cacaagcacg gtgtgctccc
     1321 attgcgccga caaactatgg tcacgggtga ccactgtcca gccgtcagcg agctgtcgga
     1381 tgtcgcgttt gcctgcattg atcatgggtt caatcgtgaa aatcatgccc ggttcgagtt
     1441 tgacaccggt ttttgggcga ccgtaatgca acacttgagg gtcttggtga aactgctgcc
     1501 caatcccgtg accgcaaaac tctctaacga ccgagtagcc gcgagcttca gcgtgtttct
     1561 gaatggcgtg accgacgtca cctagggtgt tgccaggacg aacttgctca atacctaacc
     1621 acatgcactc ataggttgtg tcagttagac gtctggcagc gattgacggc tcgcccacgt
     1681 aatacatccg gctggtatca ccgaaccagc cgtctttgat g
//
LOCUS       DATBNL010000485         2025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_125371, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000485 DATBNL010000000
VERSION     DATBNL010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125371"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1112
                     /locus_tag="VIC30_08460"
     CDS             27..1112
                     /locus_tag="VIC30_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY7804447.1"
                     /translation="MTQTPSISLEDMVPVTILTGFLGAGKTTLLKRILTEYHGKRIAV
                     IENEYGPESIDNDLLVEVRDEEIIELSNGCVCCTVRGDLLRTLTDLRARRESGELSYE
                     RVMIETTGMANPGPVCQTFFMDDDVAEYFRLDAVVTVVDAKHGMQTLDDQEEAQKQVG
                     FADRILVSKRDLVTDQEFETLRKRLVNINPRAPIEAVHFGEADLASIIDISGFNLNTI
                     LDIDPAFLADDHPDAAHDHDHSHDHSHDHGHDHDHHDHHHAHHDDTIGAFVFKADKPF
                     DPERLEEFLGGVVQVYGPDLLRYKGILYMKGIDRRMLFQGVHMLMGAEPGKPWAPKEK
                     KSTKMVFIGRKLPQDILVKGLEQCLAA"
     gene            1172..1630
                     /gene="dksA"
                     /locus_tag="VIC30_08465"
     CDS             1172..1630
                     /gene="dksA"
                     /locus_tag="VIC30_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEY7804448.1"
                     /translation="MATKAAPKKTKSATADNTIPTEAELLKMPESDYMNAQQLAFFKQ
                     RLQQLESEILVNAGQTTEHLRETQYVPDPADRATIEEEHALELRTRDRERKLLKKVQQ
                     SLMRIESGEYGWCEETGEPIGVARLLARPTATLSLEAQERREKRQKMFGD"
     gene            1699..>2025
                     /gene="hslV"
                     /locus_tag="VIC30_08470"
     CDS             1699..>2025
                     /gene="hslV"
                     /locus_tag="VIC30_08470"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015038704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEY7804449.1"
                     /translation="MEQFHATTIVCVRRGNRVAMGGDGQVTLGNIVIKGTARKIRRLY
                     HDKILAGFAGATADAFTLQERFEGKLEKHQGHLMRAAVELSRDWRTDRILRRLEAMLI
                     VADHEHT"
BASE COUNT          521 a          530 c          556 g          418 t
ORIGIN      
        1 tagttacaac tcaaccttgg taaaagatga cacaaactcc ctcgatttcg cttgaagaca
       61 tggtgccagt cacgattctg accgggtttc tcggcgcggg taaaacgact ttgctcaagc
      121 gtatcctgac tgagtatcac ggcaagcgaa ttgccgtgat agagaacgaa tatgggcccg
      181 agagcattga caacgaccta ctcgttgaag tgcgagatga agaaatcatt gagctgtcca
      241 acggttgcgt gtgctgcaca gtccgtggtg acttgttgcg caccttgacc gatttgcggg
      301 ctcgtcgcga atccggcgaa ctaagctatg agcgtgtgat gatcgagacc accggtatgg
      361 ccaatcccgg tcccgtctgc caaacgttct tcatggacga cgacgtcgcc gaatacttcc
      421 ggctagacgc tgtggtcaca gtcgtcgatg ccaagcacgg catgcaaacg cttgatgatc
      481 aagaagaagc gcaaaagcag gttgggtttg cggatcgtat cttggtgtcc aagcgggatt
      541 tggtgactga ccaagagttt gagacgctgc gcaagcgcct agtcaatata aacccgcgcg
      601 caccgattga agcggtgcat ttcggtgagg ctgacttagc gagcatcatc gacatcagtg
      661 gctttaacct gaacaccatt ctggatatcg accctgcgtt tttggcagat gaccacccgg
      721 acgctgccca cgatcatgat cacagccacg atcatagtca tgaccacggg catgatcacg
      781 atcaccacga ccaccaccac gcacaccacg atgacactat cggtgcattc gtgttcaaag
      841 ccgacaaacc gttcgatcct gagcgtcttg aagagtttct cggtggcgtc gttcaggtgt
      901 acgggcccga tttattgcgt tataagggca tcctctacat gaaaggcatc gacagacgca
      961 tgcttttcca gggtgttcac atgctcatgg gcgctgagcc cggcaagccg tgggccccga
     1021 aagagaaaaa gagcacaaaa atggtattca tcggccgcaa actgccccaa gatatcctcg
     1081 tcaagggttt ggagcagtgc ttagcggctt aaggtagtaa gaaggcagta tctttgaccc
     1141 ggtcaaagac cgactgaaat ggagcaagcg catggcaacg aaggcggcac ctaaaaaaac
     1201 caagtcagcc acagctgaca acaccattcc gactgaagcc gagttgctga agatgccgga
     1261 atccgactac atgaatgcac aacaactggc attctttaag caacggctgc agcaactcga
     1321 gtcggaaatc ctggtcaatg ccggacagac gactgagcac ctgcgcgaga cgcaatatgt
     1381 gcctgatccg gccgatcgtg caacgatcga agaagaacac gcacttgagt tacgcacgcg
     1441 tgaccgtgag cgtaagttac tgaagaaagt acagcagtcg ctcatgcgca ttgagtcagg
     1501 cgaatatggc tggtgcgaag aaaccggaga acccatcggg gtagcccgtt tgttggctag
     1561 gccaactgct acgctatcac ttgaggcgca agagcgtcgc gagaagcgcc aaaaaatgtt
     1621 cggcgattaa gtcgcacgtc tagttagtca acacggagtc ggccgcgccc gattccgtgc
     1681 aaccatccga aggcagttat ggaacaattt cacgcaacga ccatcgtctg cgtgcggcgc
     1741 ggcaaccgcg tcgccatggg cggtgatggt caagtcacat tgggcaatat tgtgatcaag
     1801 ggcacggccc gaaagattcg acgtctttat catgacaaaa ttctcgctgg gtttgcaggt
     1861 gccacagccg atgcctttac gctgcaagag cgattcgagg gcaaactaga aaaacaccaa
     1921 ggtcacctga tgcgcgccgc tgttgagttg tcgcgagact ggcgcactga ccggattttg
     1981 cgtcggttag aggccatgtt gattgttgct gaccacgagc acaca
//
LOCUS       DATBNL010000486         2219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_5470, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000486 DATBNL010000000
VERSION     DATBNL010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5470"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VIC30_08475"
     CDS             <1..342
                     /locus_tag="VIC30_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY7804450.1"
                     /translation="MLDTRAKNLTVGGMKRLEMARALATNPRVLLLDEVLAGLNPADV
                     SKAIAIIHRIRESGVSVLMIEHIMQAVMQLSDRVVVINTGSVLTAGLPAEVVNDNRVI
                     EAYLGKEYTHA"
     gene            335..1039
                     /locus_tag="VIC30_08480"
     CDS             335..1039
                     /locus_tag="VIC30_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804451.1"
                     /translation="MLKLEGVSAGYGGTVIIRGLDMEVKRGEVVTIVGANGAGKTTTL
                     RTICGIVKPTSGKIEFEGNVISGLRSDQVVNSGLTMVPEGRQLFPFITVQDNLLMGAY
                     KPGARSVAQQRMEEVLEIFPRLRERLKQLGGSLSGGEQQMVAIARGLMSNPAMLMFDE
                     PSLGLSPLLVSQVFEVINQIVSMGTTVLIVEQNIVHTLKIADRGYVLENGEITLTGTG
                     AELLDNPHVKKAYLGI"
     gene            1041..1814
                     /locus_tag="VIC30_08485"
     CDS             1041..1814
                     /locus_tag="VIC30_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804452.1"
                     /translation="MTASRHHGRMVLITGAGSGIGAAIASQYAEEGAVLALVDVDQKA
                     VLAKAVELRQGGARVATGVADVSDFASCQEIHQHLISELGGDFDTLINNAGISPKTNG
                     KPTDFWKMDPQEWQRVVGVNLNGAFNWTRLVAPSMVQAHFGRVVNMSSVAAKSFVSFT
                     GAHYGTSKAALIGLTRDLAGELGPHGITVNAVAPGRIDTPLMRGAATSTNEAVVLQTP
                     LGRLGLSSEVAEVVCFLTGSESSFVTGQVVDVAGGWLMT"
     gene            complement(1823..2167)
                     /locus_tag="VIC30_08490"
     CDS             complement(1823..2167)
                     /locus_tag="VIC30_08490"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY7804453.1"
                     /translation="MKRIRKCLIGMEYAIASDCLGDEEDYQFHQAIILATHNPYFETL
                     NQHLEHTARRMIRRLRSNTRTRLTNLIEAVQAEHQAIYNAIAAGDADGAEDAAKTHLQ
                     NAAKRYVKYLKP"
BASE COUNT          530 a          475 c          639 g          575 t
ORIGIN      
        1 atgctcgaca cgagggcaaa gaacctgaca gtgggtggta tgaaacggct tgagatggcg
       61 cgtgcgctag ccaccaatcc ccgggttcta ttgctcgatg aagtgttggc tggcttaaat
      121 ccagctgatg ttagcaaggc aatcgctatc atccatcgaa taagagagtc tggcgtgtca
      181 gtcctgatga ttgagcacat catgcaggct gtgatgcagc tttcagatcg ggtagttgtc
      241 attaatacag gcagcgttct gacagcggga ttgcctgcag aagttgttaa cgataaccga
      301 gtcatcgaag cctatctcgg taaggaatac acccatgctt aagctagaag gcgtgtcagc
      361 cggttatggt gggacagtaa tcattcgtgg tcttgacatg gaagtcaagc gtggagaagt
      421 tgtcacgatt gttggtgcta acggtgctgg aaagacaacc actttaagaa ccatttgtgg
      481 cattgttaaa ccgacatctg gaaagatcga gttcgaaggc aatgtcatta gtggtttgcg
      541 ctcagatcag gtcgtcaata gtgggttgac gatggtaccc gaaggcaggc aactgtttcc
      601 ttttattacc gtgcaagaca atctactgat gggggcctac aaacccggag ctcgatcggt
      661 ggctcagcag cgcatggaag aggtgctaga aatatttcca cggttgcgcg aacgtctaaa
      721 gcaactcggc ggcagcttgt ctggtggaga acagcaaatg gttgccattg ccagagggtt
      781 gatgtcgaat cccgctatgt tgatgttcga tgagccttca cttgggctgt cgccacttct
      841 ggtgtctcag gtatttgaag tcattaacca gattgtttcg atgggcacca ctgtgctgat
      901 tgttgaacag aatattgtgc acaccttaaa gatagctgat cgggggtatg tccttgagaa
      961 cggggaaatc acattgactg gcactggtgc ggaattgctt gataacccgc atgtcaaaaa
     1021 agcgtatctg gggatctgat atgacggcga gccgacatca cggacgcatg gttttgatca
     1081 caggcgctgg cagtggtatt ggtgcggcca ttgcaagcca atatgctgag gagggtgcag
     1141 tgcttgcatt ggtcgatgtg gatcaaaaag ccgtgctcgc taaagcagtt gagcttcgac
     1201 aaggaggcgc tcgtgtggcc accggtgttg cagacgtgtc tgattttgct agctgtcaag
     1261 aaatacatca gcatttaatt agtgagttgg gtggtgattt tgatacgttg attaataacg
     1321 cgggcatatc acccaaaaca aacggtaaac cgacagattt ttggaaaatg gatccgcaag
     1381 agtggcaacg tgtggtcggc gtgaatctaa atggtgcttt taattggaca cgattggttg
     1441 caccttcgat ggttcaagcc catttcggcc gagtagtaaa catgtcttct gtcgcagcta
     1501 agtcatttgt gtcattcacg ggggctcatt acggtacctc caaagcggct ttgatcggct
     1561 taacccgtga ccttgcaggt gaattgggac cgcatggtat tacggtcaat gcagttgcac
     1621 caggtcgaat tgacacgccg ttgatgcgcg gcgcggcaac cagtacgaat gaagcggtgg
     1681 tcctacaaac gccactcgga cgactgggct tatccagtga ggtagcagag gttgtttgtt
     1741 ttttgacagg ctcagagagc agcttcgtta caggtcaagt cgtcgatgtg gcaggcggat
     1801 ggctaatgac ctgagcgtcg cttcagggtt taaggtattt aacgtaacgt ttggcagcat
     1861 tttgcagatg agttttggca gcatcttcgg caccgtcggc atcaccagcg gcaatcgcat
     1921 tgtaaatcgc ttggtgttca gcttgaaccg cttcaatcag attggtgagg cgagtgcgcg
     1981 tattgctacg aaggcgtctg atcatacgcc gtgccgtgtg ctcgagatgt tgattcaacg
     2041 tttcaaagta tgggttgtgg gtagccaata tgatcgcctg atgaaactgg tagtcttctt
     2101 cgtcaccaag gcagtcgctc gcaatcgcgt actccatacc gatgagacat ttacgaatgc
     2161 gtttcaagtc ttcaggcgtt cggcgttgcg ctgcaagacg agtggcagct acttctacg
//
LOCUS       DATBNL010000487         2114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_175011, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000487 DATBNL010000000
VERSION     DATBNL010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175011"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1192)
                     /gene="pcnB"
                     /locus_tag="VIC30_08495"
     CDS             complement(<1..1192)
                     /gene="pcnB"
                     /locus_tag="VIC30_08495"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:1990817 - poly(A) RNA polymerase activity
                     [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEY7804454.1"
                     /translation="MITQRIKGLVKRLVNGQPGQSQTGPQRYGQREHKIDRHHVSRNA
                     VKVCEVLQQHGYEAYIVGGAVRDLIIGLEPKDFDVATNATPEQVQPLFRRARIIGRRF
                     KLVHVVFGREIIETSTFRAPSTGEQLTDDHGRILRDNVFGNQQQDAERRDFTINALYY
                     DPVNETVIDWHQGVRDLNRRIVRMIGEPGQRYREDPVRMLRAVRFAVKLKGKIDPGTE
                     APIAGVADLINNVPASRLFDEILKLLTCGDAMQCVKQLRAHGLHSGLLPLLEIILEDP
                     EGHAFIELALERTDARIRAGKTVSPSFLFAALLWPQVRLHWQRLCNAGEHVAPALISA
                     ADQVLNAQTESLAINRRYASDMREIWFMQPRFERRLPKAIHRLFEQPRFRAAVEFLQL
                     RAACD"
     gene            complement(1192..1890)
                     /locus_tag="VIC30_08500"
     CDS             complement(1192..1890)
                     /locus_tag="VIC30_08500"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY7804455.1"
                     /translation="MTSKRLALFDLDHTLLPLDSDYQWADYLARTGRAGDPAIARARN
                     EELMQRYNAGELTAEEAAEFMLGLLAAHEPHDLAHWHEQFMQEVIRPSLTEQALNLVR
                     EHLCNGDLCAVVTATNSFVTAPIPRAFGVPHLIATDPQYVAGRYTGKIHGTPSFREGK
                     VVRVNDWLDSMGLSLDAFDQSHFYSDSMNDLPLLEAVTHPVVTNPSTTLHELARERQW
                     PVLQLFEQNLDQKS"
     gene            complement(1887..>2114)
                     /locus_tag="VIC30_08505"
     CDS             complement(1887..>2114)
                     /locus_tag="VIC30_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEY7804456.1"
                     /translation="LSDDEKFDALMHHAKARGMPLSVDVLRWLLTHGSRDIRALFAAL
                     DALDRYALANHRALTLPLLKTMLAREPATKP"
BASE COUNT          446 a          556 c          623 g          489 t
ORIGIN      
        1 tgtcacaggc tgcgcgcagc tgcaaaaact caacggctgc acggaatcgg ggttgttcaa
       61 acaggcgatg aatcgctttg ggcaatcggc gctcaaagcg tggttgcatg aaccagattt
      121 ctcgcatgtc tgaggcgtaa cgacgattaa tcgccagcga ctcggtttgg gcgtttaaca
      181 cttggtcagc cgctgaaatc aaagccggcg ctacatgctc gccggcgttg caaagacgct
      241 gccagtgcag gcgcacctgt ggccacagca gtgctgcaaa caagaagctc ggactgacgg
      301 ttttgccggc acgaatacgt gcatcggttc gctcaagtgc cagttcgata aaggcatggc
      361 cctcgggatc ttcgagaatg atctcaagca aaggcagcag accactgtgc aggccgtgtg
      421 cgcgcagttg cttgacgcac tgcatggcgt cgccgcaggt gagcagcttc aagatttcat
      481 caaacaagcg tgacgccggt acgttgttga tcaggtcggc cacgccagca atcggtgctt
      541 cggtgccggg gtcgatcttt cctttgagtt tcacggcaaa gcgcaccgcg cgaagcatcc
      601 gcacagggtc ctcgcggtag cgttgcccgg gctcgccgat catccggaca atacgacggt
      661 ttagatcccg tacaccctga tgccagtcaa tcaccgtttc attaacgggg tcgtagtaca
      721 gggcgttgat cgtgaaatcg cgccgctcgg catcttgttg ctggttacca aacacgttgt
      781 cgcgcaggat gcggccatga tcgtcagtta actgttcgcc agtagagggg gcacgaaacg
      841 tcgaggtttc aatgatttct cgaccaaaca ccacgtgcac gagcttaaag cgccggccga
      901 taatacgtgc acgtcgaaac agtggttgta cttgttcggg cgtggcgttt gttgccacat
      961 caaaatcttt gggttcaagc ccaatgatga ggtcgcgcac ggcgccgcca acgatgtaag
     1021 cctcatagcc gtgttgttgc agaacttcgc agactttcac ggcgttacga gacacgtggt
     1081 ggcggtcgat tttatgttcg cgctgcccat aacgttgtgg gccggtttgt gattgaccag
     1141 gttggccatt gactaagcgc ttgaccagcc ctttgatgcg ttgtgtgatc attaagactt
     1201 ctggtccagg ttttgttcaa agagctgcag cactggccat tggcgctctc gcgctagttc
     1261 gtgcagtgtg gtgctcgggt tggtcaccac ggggtgggtg acagcttcta gtagtggcaa
     1321 gtcgttcatc gagtcgctat aaaaatggct ttgatcaaac gcatccaagc tcaggcccat
     1381 gctgtctagc cagtcattga ctcgcaccac tttgccttcg cggaaactcg gtgtgccatg
     1441 gattttgccg gtgtaccggc cggccacgta ctgtgggtcg gtggcaatga gatgcggtac
     1501 accaaatgca cgtggaatcg gtgccgtcac aaagctgttg gtggcagtga caacggcaca
     1561 caagtcacca ttgcacaggt gttcgcgcac cagattcagt gcttgttcgg tcaggctcgg
     1621 tcggataact tcctgcatga actgttcgtg ccagtgcgcc agatcgtgtg gttcatgggc
     1681 agcaagtaag ccaagcatga actcagctgc ctcttcagcg gttagttctc cagcgttata
     1741 gcgctgcatc agttcttcgt tgcgcgcgcg tgcgatcgcg gggtcgcccg cacggccggt
     1801 gcgagcaagg tagtctgccc actgataatc actgtcaagt ggcagcaatg tgtggtctag
     1861 gtcgaatagc gcaagtcgtt ttgaggtcat ggtttcgtgg ccggctcacg ggccagcatg
     1921 gtttttaaca agggcagtgt taatgcccga tggttagcca gtgcatagcg atccaatgca
     1981 tcaagcgcgg cgaacaaggc acgtatatcg cgcgacccat gagtaagtag ccagcgcaag
     2041 acatctactg acaagggcat gccacgtgct ttggcatggt gcatgagcgc gtcgaacttt
     2101 tcatcgtcag acaa
//
LOCUS       DATBNL010000488         2197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_165773, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000488 DATBNL010000000
VERSION     DATBNL010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165773"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VIC30_08510"
     CDS             <1..760
                     /locus_tag="VIC30_08510"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEY7804457.1"
                     /translation="LIMPDSFSSAALFAINGIASCGYQDDGRSLLLRHASRKPDHPVH
                     AVQKWWLLTEFALKQWQVSSSFVQRTPPPPVLLEISDQERSMAKQVLQAQGLIDQPFI
                     LVAPTATGKHQGKVKVWPHFAALAAELKKQGRAVAMCPPPNEREQALAACPDALLLDP
                     LPLKSFCALTQMAELVVCNDSGVSHLAAASGAQQLTLFGVTDPRHTGPWSEHAARLGQ
                     QGQWPSLEAALTQVKAMLGQPISPIEQPASAQSI"
     gene            770..1543
                     /locus_tag="VIC30_08515"
     CDS             770..1543
                     /locus_tag="VIC30_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEY7804458.1"
                     /translation="MLNSLAYSLLFPPTVLVALVVVAVFLLLIRRRVSAIVCLLAGLF
                     WVLVWSLPATTLIAGGWLEQRFVPQSAENYPSAQAIVVLGGHIQGNRRNWFEPYDRAN
                     VVGRETLAAELYHAGRAPLILLSGGALVGNISDTANMARNLQGAGVPAEAILQETESQ
                     STVENAVMTQQTLQRLDLSRILLVTSALHMPRAMAAFDNTAINVTAAPLPMQIELTEQ
                     AAKEPWSPDLHTLLASRSIIKEYAGLLVYWLGDVWQEIG"
     gene            1683..>2197
                     /locus_tag="VIC30_08520"
     CDS             1683..>2197
                     /locus_tag="VIC30_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804459.1"
                     /translation="MTPNKNLEYLESFCVLLFAVAVFIWKPGIYVASGLICLYLILRI
                     TIETEFRNTLWNSTLAKLSLGMYALGLITATLGAETYQDVSWMARKTLFLPVVVFLAF
                     ALKRQVNQRLAMTGLVIGFWIATFITLWDYDWQLNLGHRMQGPWPQGTWDSLLGLFFI
                     FIVLYLARIRHT"
BASE COUNT          484 a          629 c          569 g          515 t
ORIGIN      
        1 cttgatcatg cctgactctt tctcgagcgc cgcgttgttt gctattaacg gcatcgccag
       61 ttgtggctac caagacgacg gacgcagctt gctgttgcgc cacgccagcc gtaaaccgga
      121 tcacccggtc cacgccgttc aaaaatggtg gctactgacg gaatttgcct taaaacaatg
      181 gcaggtgtct agctcctttg tgcaacggac tccaccaccg cctgtcttgc tcgaaatttc
      241 cgaccaagag cggtctatgg ccaagcaggt cctacaagca caagggctta tcgatcaacc
      301 gttcattctg gttgcaccga ctgccactgg caaacaccaa ggcaaggtca aggtatggcc
      361 gcactttgcg gcactggcgg ccgaactcaa gaagcaaggt cgcgccgtgg ccatgtgtcc
      421 gccacccaac gaacgcgaac aagcactagc agcttgccct gatgccctct tgctagatcc
      481 cctgcccctg aaatctttct gtgcactaac tcaaatggct gaactcgtgg tgtgtaacga
      541 ctcgggtgtc tcgcatctag cagctgcctc aggcgcccag cagctaacgc tgtttggggt
      601 aaccgaccct cgccacactg gcccttggtc cgagcatgcc gcgcgactgg gtcaacaagg
      661 tcagtggcct agcctagaag ccgcgctgac acaggttaag gccatgcttg ggcaaccaat
      721 tagccctatc gagcaacctg caagcgcgca gtcgatttag actatcggta tgttgaacag
      781 tttggcctac agccttttgt ttccccccac ggtgcttgtt gcgttggtgg tggtggcggt
      841 gtttttactg ctgattcgcc gcagggtcag cgccatcgtt tgcctactgg caggcctgtt
      901 ctgggtgctg gtgtggtcgt taccagccac gaccctgatt gccggcggct ggttggagca
      961 acgctttgtg ccccaaagcg ctgagaatta ccccagcgct caagccatcg ttgtcttggg
     1021 cgggcacatc cagggcaatc gacgcaactg gttcgagcct tatgatcgtg ccaatgttgt
     1081 aggacgtgaa accctggctg cagagcttta ccacgcaggg cgagcaccgc ttattctctt
     1141 atctggcggc gctttggtgg gcaatatcag tgatactgcc aacatggcac gcaacttgca
     1201 gggtgctggt gtgccagccg aagccatctt gcaagagact gagagccaga gcaccgttga
     1261 aaacgccgtc atgacacagc aaacgctgca aagacttgat ctgagtcgaa ttctgttagt
     1321 cacttcagcc ctgcacatgc cgcgcgccat ggcggcgttt gacaacaccg ccatcaatgt
     1381 cacggcagca ccgctgccta tgcaaattga attaaccgag caggcggcta aagaaccctg
     1441 gtcacctgac ctgcacacac tactggcgag tcgcagcatc atcaaagagt acgccggctt
     1501 gctagtgtat tggctaggcg atgtgtggca agagatcggt taagacaaaa ccaatcggta
     1561 caaacaccca atcgatttgg gaagcgacgg gttttgtcat atattctggc ctctaacatc
     1621 tgtatcaacg cccatggcgg ggcaggcgat cgcctaaacg acgtcaccaa cccaaccgct
     1681 tcatgacacc taacaaaaac ctcgaatatc tagaatcatt ctgcgttctg ctgttcgcag
     1741 tagccgtctt catctggaaa ccgggtattt acgtcgcatc gggcctgatc tgtctatacc
     1801 taatccttcg aataaccatt gaaaccgagt tcagaaacac gctttggaat tcaaccctag
     1861 ccaaactcag tttgggtatg tatgccctgg gtctgataac ggcaaccctc ggtgctgaga
     1921 cctatcagga cgtgtcgtgg atggctcgca agacgctttt cttacccgtc gtggtgtttc
     1981 tagcctttgc gctcaaacgc caagtcaatc aacgactggc aatgacaggg cttgtgattg
     2041 gtttctggat tgccaccttc attaccctgt gggactatga ctggcaactt aaccttggac
     2101 accgtatgca gggcccgtgg ccgcagggca cttgggattc gttactgggt ttattcttca
     2161 tctttatcgt gctttatctc gcgcgcatac gacacac
//
LOCUS       DATBNL010000489         3405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_75738, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000489 DATBNL010000000
VERSION     DATBNL010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75738"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VIC30_08525"
     CDS             <1..273
                     /locus_tag="VIC30_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804460.1"
                     /translation="LELGPFGVRVNAILPGAVDGPRIRAVIAAKSKTLNVDEQELTHR
                     HEQQAALGRMVTTRDVANMALFAASDAACNITGQELVVDGHTQALI"
     gene            539..1582
                     /locus_tag="VIC30_08530"
     CDS             539..1582
                     /locus_tag="VIC30_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY7804461.1"
                     /translation="MKKLLTAAAATALLFSAQPESAFASKTIDVASTFPKNLTFLGEG
                     AENLSKLLSDVSDGELNLKVYGAGELVPALEVFNAVSTGAVPAGWDWIGYWAGTVPVT
                     GLMGAMPFGPDPEVFLGWMWEGGGREILQKAYDPYNVEVFPCHLTAPEPGGWFNKEIN
                     TPEDFKGLKMRISGLGGKVLNNLGASTQLIAGGEIYVALERGRIEATEFSLPVIDKSL
                     GFQDIAKYYYFPGWHQPASWNSLLINKDVYNEFTDLEKKQLEVACMANIVWTMSVAPG
                     AQVPALEEFQKAGIEVKRFPPEVLAALEVESANVLAQEAESDPIFKEAYESLLNYMET
                     VDQWHGIQSLPRN"
     gene            1585..2220
                     /locus_tag="VIC30_08535"
     CDS             1585..2220
                     /locus_tag="VIC30_08535"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY7804462.1"
                     /translation="MTDQATHSAVTAADAPQNTLQRIGQVLMSIGAWPGMASSWLVLP
                     TIFCVLAAVLGGIMRLSQLATWDEPVLLFGDQLSIIGLTELQWHFLAVMVMFGGSYAL
                     QQNSHVRVDMIYAKVSPKTRAAIDVVGDLLLLLPFCAIVAWLSLRFVDMSIRSNEQSD
                     YGGLVDRYLVKAVIPIGLSLLFLTGFGRVLRNVGFLLSKPAVAVKSASNNE"
     gene            2235..>3405
                     /locus_tag="VIC30_08540"
     CDS             2235..>3405
                     /locus_tag="VIC30_08540"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804463.1"
                     /translation="MGEYFLPIMMMLALIAGIFSGYPVALLLAGIGVLFSFFAGINVM
                     FLGTVVNRIFSGTLSNWLLLAVPLFIFMGLMLEKSDAARKLLLSLERLFAGKRGGLAI
                     SVAVLGIVMAASTGIIGASVVLLGVLALPVMLRQKYDKGLACGLICASGTLGILIPPS
                     IMLVLVGDILSISVGDLFLGAIFPGLFLGVLYVGYIVVIAIFFPEKAPAGVVDVDDTR
                     PLWLALAADLVAPVLLIIGVLGSIVIGIATPTEAAAIGAFGTIVIAAFAKQLTWANIK
                     YCVYETGKTTSMILWVAIGATCFSVIFKRVGGDAMVEDVVMSVATGPFMTLFIIMSLI
                     FILGFFLEWIEISYIALPLFAPIVLALDFGLGLSSSETLIWFAILVAICLQTSFLT"
BASE COUNT          731 a          826 c          922 g          926 t
ORIGIN      
        1 ctcgagcttg gacccttcgg tgttcgagtc aacgcgatcc tgcccggtgc ggttgacgga
       61 ccccgaattc gagccgtgat tgccgccaaa tcaaaaaccc taaacgtcga tgaacaagag
      121 ctcacacatc gccatgaaca acaagctgca ctcgggcgta tggtgacgac ccgtgatgtg
      181 gccaacatgg ccttgtttgc cgcgagcgat gctgcttgca acatcaccgg acaggagctt
      241 gttgtcgacg gtcatacgca agctctgatc tgacgtgcac acgtcagtcg ataagttgta
      301 ggacatccta gtgatatccc tatcaggggt gacatcacat tgacttgtgc tcggcacatc
      361 ctaataatcg ggttgtggtt agcggctgtt ggaatttttg acaggcaaac cactcgatag
      421 aaaatttgtg agtttggtca caacgccaac atacctcacc aaagatgtgg agtgtggcgt
      481 tggactaaga caacatcgac ctgtggcaca tacaacaaca taggaagtga ggatgacaat
      541 gaagaaactt ttgacggctg cggcggcaac tgccctgcta ttttcggctc aacccgaatc
      601 tgcctttgcc agtaaaacca tcgacgtagc cagcacgttc ccgaagaacc tgacattcct
      661 tggtgaaggt gcggaaaacc tatccaaact cttatccgat gtctctgacg gtgagcttaa
      721 cctcaaggtt tatggtgctg gtgaactggt accggcgctc gaagtgttta acgccgtcag
      781 tacaggtgca gtacctgcag gttgggactg gatcggatac tgggccggta ctgtgccggt
      841 tactggactg atgggcgcca tgccatttgg tcctgaccct gaagttttct tggggtggat
      901 gtgggaaggc ggtggccgtg aaatcctgca aaaagcatac gacccgtaca acgtagaagt
      961 atttccttgc catctgacag cgcctgaacc gggcggttgg tttaacaaag aaatcaacac
     1021 ccctgaggat ttcaaaggcc tgaaaatgcg tatttcgggt ctaggtggca aagtgttgaa
     1081 taacctgggc gcatcaaccc aactcattgc tggcggtgaa atttatgtgg cgcttgagcg
     1141 cggccgtatt gaagccacgg aattctcatt gcctgtcatc gacaagtcat tgggctttca
     1201 agacatcgcc aaatactact acttccccgg ctggcaccag cccgctagtt ggaactcatt
     1261 gttgattaac aaggatgtct acaacgagtt cactgacttg gagaaaaagc aacttgaagt
     1321 ggcttgcatg gcaaacatcg tctggacgat gtctgttgca cctggcgccc aagttccagc
     1381 acttgaagag ttccagaaag ctggtattga ggtcaagcga ttcccgccag aggtacttgc
     1441 tgcgcttgag gtagagtcag ccaatgtact ggctcaagag gcggaatcag atcccatctt
     1501 caaagaagcg tacgagtcat tgctcaacta catggaaacc gtggatcagt ggcacggcat
     1561 ccaaagcttg cctcgtaact aagcatgacg gatcaggcaa cacattcggc ggtcacagcc
     1621 gccgatgcac cacaaaatac gctgcagcgc atcggtcagg tcctgatgag tatcggggcc
     1681 tggccgggca tggctagctc atggctggtc ttgcccacca ttttttgtgt gctcgcagcg
     1741 gtgttgggcg gtatcatgcg gctatctcaa ttggcaactt gggacgagcc agtcttgtta
     1801 tttggtgacc aattgagcat tatcggtctc actgaattgc aatggcattt tctggctgtc
     1861 atggtgatgt tcggtggttc ttacgcattg caacaaaaca gtcacgttcg ggttgacatg
     1921 atttatgcca aggtgagccc aaaaacgcgc gcagccatcg atgtggtggg cgaccttttg
     1981 ctgttgctgc cgttttgtgc catcgtggca tggctgtctt tgcggtttgt cgacatgtca
     2041 atacgttcaa atgagcaatc ggattacggt ggtcttgtag acaggtattt agtgaaagct
     2101 gttatcccca ttggcttgag cttgctgttt ctgactggat ttggtcgggt cctgcgcaat
     2161 gtaggatttt tgctgagcaa gcctgccgtg gcagtgaaat ccgcctcgaa caacgaatag
     2221 tcaagaggta acttgtgggc gaatattttc tgccgattat gatgatgctc gcgctaatag
     2281 ccggcatttt ttcaggctat cccgttgcat tactcttggc aggtatcggg gtactgttta
     2341 gtttttttgc aggtatcaac gtcatgttcc tcggtacggt ggtcaaccgt atcttcagtg
     2401 gaacgctgtc gaactggttg ttgctggctg tgccgctgtt catttttatg gggctcatgt
     2461 tggagaagtc cgacgcagcc cgaaaactgc tgttgtcgct tgaacggttg tttgccggca
     2521 agcgaggggg tttggcaatt tccgtggcgg tgcttggcat cgtcatggct gcatcaacgg
     2581 gcatcattgg cgcatccgtt gtcttgcttg gcgttctggc actgccagtc atgcttcgac
     2641 aaaagtatga caaaggattg gcgtgtggcc taatttgtgc ctctggcaca cttggcattt
     2701 tgatcccgcc ctctatcatg cttgtcctgg taggggatat attgagtatc tcagtgggcg
     2761 acctatttct gggtgcgata tttccaggtc tttttctggg cgtgctttac gtcggctata
     2821 tcgttgtcat tgccatcttt ttcccagaga aagcaccggc cggtgttgtc gatgtcgatg
     2881 acacccgacc actgtggctg gcccttgcgg ctgatctggt ggcgcccgta ctcttaatca
     2941 ttggtgtttt aggctccatc gtgatcggca ttgcaacgcc aacagaggct gctgccatcg
     3001 gcgccttcgg cacgatagtc atcgcggctt ttgcaaaaca gttaacgtgg gccaatatta
     3061 agtactgcgt ctatgaaacg ggcaagacga cttcaatgat tctctgggtc gccattggtg
     3121 ccacttgttt ttctgtgatc ttcaagcgtg ttggtggtga cgcgatggtc gaggatgttg
     3181 tcatgtccgt ggccactggc cccttcatga ccttgttcat catcatgtcg ttgattttta
     3241 ttcttgggtt cttccttgag tggatcgaaa taagttacat cgcccttccc ctgttcgccc
     3301 caattgtgct cgctctggat tttgggctgg gcttaagctc ctctgagacg ctgatctggt
     3361 ttgccatctt ggtagctatt tgcctacaaa ccagcttctt aaccc
//
LOCUS       DATBNL010000490         2887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105669, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000490 DATBNL010000000
VERSION     DATBNL010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105669"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..625)
                     /locus_tag="VIC30_08545"
     CDS             complement(158..625)
                     /locus_tag="VIC30_08545"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008164315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY7804464.1"
                     /translation="MSNTPGVGDQAPDFEVESTAGIVRLSDTLGHKLVLYFYPKDNTP
                     GCTTETQDFRDMHELFRQYDCYVAGVSRDSLRSHENFSAKLNLPFALIADPNEKLCNL
                     YNVMRDKKMYGKTVRGIERSTFLIGADGKIAAVWRGLKVPGHAQAVLDTLKTL"
     gene            complement(618..1073)
                     /locus_tag="VIC30_08550"
     CDS             complement(618..1073)
                     /locus_tag="VIC30_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010926333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEY7804465.1"
                     /translation="MKLHDDVNPSLNTVTSYGEGFIQINETRFESAIAFGPEGEIEPW
                     PAHDASDISTALLMQACGLSKATNDPMAFLDADEGAVALDPNRPEVLLIGTGRKQVMV
                     SMTILAPLMRAGVGVECMSTGAAARTYNILMAEGRRVVAALILEKPENE"
     gene            1297..2481
                     /gene="alaC"
                     /locus_tag="VIC30_08555"
     CDS             1297..2481
                     /gene="alaC"
                     /locus_tag="VIC30_08555"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HEY7804466.1"
                     /translation="MKPFPRIERLPPYVFNITGELKMAARRRGEDIIDMSMGNPDGPT
                     PEHIVEKLVEAARRPTTHGYSVSKGIPRLRKAITDWYERRYDVVFDPDAEAIVTIGSK
                     EGLAHLMLATLDAGDTVLVPNPSYPIHIYGAVIAGANIRSVRITPGTDFFAELERAVS
                     DSFPKPKMMILGFPSNPTAQCVDLSFFERVIALAKEHNILVVHDLAYADICFDGYQAP
                     SIMQVPGARDVAVEFFTMSKSYNMAGWRIGFMVGNRELVNALARIKSYHDYGTFTPLQ
                     VAAIAALDGPQDCVQEVVQKYCSRRDVLAKGLQEAGWDVEVPKASMYIWARIPAAYRD
                     QGSLEFAKHVLESAKVAVSPGIGFGDQGDEYVRFALIENEQRIRQAVRGIKEMFRKDG
                     LL"
     gene            2481..>2887
                     /locus_tag="VIC30_08560"
     CDS             2481..>2887
                     /locus_tag="VIC30_08560"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039535.1"
                     /note="catalyzes the formation of L-aspartate
                     4-semialdehyde from L-homoserine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEY7804467.1"
                     /translation="MESIKVGLLGLGVVGGGTWNVLQRNGEEIMRRAGRQIEVTDVAV
                     RDVVKARAKVGDAVNITDDPFMVVRQPNIDIVVELIGGTTLARELVLEAIANGKHVVT
                     ANKALLATHGTEIFEAASIKGVMVAFEAAVAGG"
BASE COUNT          648 a          722 c          820 g          697 t
ORIGIN      
        1 gcgtcaatat ccaaaagagt ggcaggtcgg gacggcagct tgggaagagg catgcgagaa
       61 aatctccgta aggtaaatcc aaaacgtttg gtgtctccaa cactgccatg acagtttgac
      121 agttttgtta ctgctgtgac aagtcggttc ggtgggttta cagggttttg agggtatcta
      181 gcactgcctg agcatgacct ggcaccttta atccccgcca aactgctgca atcttgccat
      241 ctgcgccaat taaaaaggtg ctgcgctcga tgccgcgtac ggttttgcca tacatttttt
      301 tgtcacgcat cacgttgtac aagttgcaca gtttctcgtt ggggtcggca atcagtgcga
      361 atggcagatt caacttggca ctaaagttct cgtgtgaacg taagctgtcg cgcgacacgc
      421 cagcaacata acagtcgtat tgtcgaaata gctcgtgcat atcccgaaag tcttgcgtct
      481 cggtggtgca acccggcgta ttgtctttgg gatagaaata cagcaccagt ttgtgtccta
      541 gggtgtctga caggcgcacg ataccggctg tgctctctac ttcaaaatca ggggcctgat
      601 cgcccacacc aggggtatta ctcattttcg ggtttctcca aaataagggc cgccacgaca
      661 cggcggcctt cagccatcaa aatgttgtaa gttcttgctg cagcgcccgt ggacatacac
      721 tcaacgccga caccggctcg catcagcggc gccagtattg tcatgcttac catgacttgc
      781 ttacgtccag taccgatcag cagcacctcc ggtcggttgg ggtctagggc gaccgcacct
      841 tcgtcagcat cgagaaacgc catggggtcg ttggtggcct tggataagcc acaagcttgc
      901 atgagcaatg ccgtggaaat gtcgctagcg tcgtgagcgg gccagggctc gatctcgccc
      961 tcaggcccaa aggcaatcgc gctctcgaaa cgcgtttcgt taatctgaat aaacccctca
     1021 ccgtaagagg tgaccgtgtt caggctagga ttgacgtcat catgcaactt caaaaatatg
     1081 ctcctactgt tttgttgatc atacccgagc tatgagccga ttgagttagg gctgttccgg
     1141 gtttgccaga gaaaaagacc gcaaatggca ttttttgacc tgcatttgat gcattgccgc
     1201 aaatgcgcta gatttacagt ctttgcacgc tcggcgcatt gcgtccgaag cattcatacg
     1261 acccttcata cgacgctaag acctaggcac cccaagatga aaccttttcc ccgaattgag
     1321 cgcttgccgc cctatgtgtt taacatcacc ggcgagctca agatggctgc ccgacgtcgt
     1381 ggtgaggaca ttattgacat gtccatgggc aatccggacg ggccaacacc ggagcatatc
     1441 gttgaaaagc tcgtggaggc tgcgcgcagg ccaaccacgc atggctactc tgtctccaaa
     1501 ggtatcccgc ggctgcgcaa ggcgatcacc gattggtatg agcgccgata tgacgtggtg
     1561 tttgacccgg atgctgaagc cattgtgacg attgggtcca aagaaggact tgcacacctt
     1621 atgctcgcca cacttgacgc tggcgacacc gtgcttgtgc ccaatcctag ctatccgatt
     1681 catatttacg gtgcggtgat tgctggcgcc aatattcggt ccgtgcgcat cacgccgggt
     1741 acagactttt ttgccgagct tgaacgcgcg gtcagtgact cgtttcccaa acccaagatg
     1801 atgattcttg gatttcccag caatcccaca gctcagtgtg tcgatctttc gttttttgag
     1861 cgggtcattg cactagccaa agagcacaat attttggtgg tgcatgactt ggcttatgcc
     1921 gatatctgct ttgatgggta tcaagcgccc tcgatcatgc aggtgccagg tgctcgcgat
     1981 gtggcagttg agttttttac gatgagtaaa agctacaaca tggccggctg gcgtattggt
     2041 tttatggtgg ggaaccggga gttggtcaac gccttggcgc ggatcaaaag ctatcacgac
     2101 tacggcacgt ttacgccatt gcaggttgcg gccattgccg cactagatgg ccctcaggat
     2161 tgcgtgcaag aagtggtgca aaagtactgc agccggcgcg atgtgcttgc caaagggctg
     2221 caagaagctg gctgggatgt tgaggtgcct aaggcatcga tgtacatctg ggcacgtatt
     2281 ccagcagcct accgtgacca agggtcactg gagtttgcca agcatgtatt ggaatcggcc
     2341 aaagtggcgg tatctccagg cattgggttt ggtgatcagg gcgatgagta tgtgcgcttt
     2401 gctctcatag agaacgagca gcgaatcagg caagcagtgc gcggcattaa agaaatgttc
     2461 agaaaggatg ggttgctcta atggagtcga ttaaagtcgg attgctcggc ctcggtgtgg
     2521 ttggtggcgg cacttggaat gtcttgcagc gcaacggcga agaaatcatg cgacgcgctg
     2581 gcagacagat cgaagttact gacgtggcgg tgcgcgatgt ggtcaaggcg cgcgccaaag
     2641 taggggacgc tgtcaacatc acagatgacc cgtttatggt tgtgcgccaa ccgaatatcg
     2701 acatcgtggt cgagctcatt ggcggtacga cactggcgcg cgagttggtg cttgaggcca
     2761 ttgcaaatgg caaacatgtg gtcacggcca ataaggcatt attggccaca catggcaccg
     2821 agatttttga ggcggcctcg atcaagggtg tgatggtggc atttgaggcc gcggtcgccg
     2881 gtggtat
//
LOCUS       DATBNL010000491         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_135477, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000491 DATBNL010000000
VERSION     DATBNL010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135477"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1213
                     /gene="rpoD"
                     /locus_tag="VIC30_08565"
     CDS             <1..1213
                     /gene="rpoD"
                     /locus_tag="VIC30_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEY7804468.1"
                     /translation="PDPEEARVHFENLRDLYNKARETFEAKGRSHPDSLAAIFEIGEL
                     FKTFKLIPKQFDRMVNNMREMMDRVRVQERLIMKQAVQIAKLPKKTFVKHFANNETDA
                     TWVDLEIAANEKYSAKLEEVKPEIIRSLNKLRVIESSTGLNIERIKDINRRMSIGEAK
                     ARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFST
                     YATWWIRQAITRSIADQARTIRIPVHMIETINKMNRINRQILQETGAEPDPATLAAKM
                     DMPEDKIRKILKIAKEPISMETPIGDDDDSHLGDFIEDLITLAPADSALHGSMRDVVK
                     EVLDSLTPREAKVLRMRFGVEMSSDQTLEEVGKQFDVTRERIRQIEAKALRKLRHPSR
                     ADKLRSFLENQ"
     gene            1227..1955
                     /locus_tag="VIC30_08570"
     CDS             1227..1955
                     /locus_tag="VIC30_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014429689.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEY7804469.1"
                     /translation="MSTFTQKVLPAILISGGLTVGGWFVGQGLESFRQAERFITIKGL
                     AEQDVKSDFAIWGLSFRRAGEDYQQVRSELTTDREAVVAFLQEQGFTADEIEARPLRI
                     TDLMAREYGQQEVALRYTGEGSVLVRSSRVDLVAKVSNAIDPLITAGVPLSQEGPGGG
                     PPRYFLRGFNDVKPELLEQAVNNAREQAEKFAADAGADLGQLRRANQGTIQILDDDGS
                     DGYSSGLTSGKRVRVVSTFEYLLQ"
     gene            1981..>2510
                     /locus_tag="VIC30_08575"
     CDS             1981..>2510
                     /locus_tag="VIC30_08575"
                     /inference="COORDINATES: protein motif:HMM:NF021363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HEY7804470.1"
                     /translation="MVAKRVKKYLPASDKVSQHKMLRWLGPTLTKPSLWQINRRSIAM
                     GLAIGVFWGFLIPVAQIVFAAIMAVFLRANLPMAIGSTLVTNPVTFAPVYFLAYQFGD
                     FVLGKSGPDVTEEMLAAQMGQISVTSAGWIDRIGDVAAPLFTGLVVFASVGAVLSYVV
                     VSLLWRLAVVLRYRKRL"
BASE COUNT          618 a          559 c          692 g          641 t
ORIGIN      
        1 gccagatcct gaagaagcac gtgttcattt tgaaaactta cgtgatttat ataataaagc
       61 acgtgaaacg tttgaagcta aaggtcgctc gcacccagat tctcttgccg ctatatttga
      121 aattggtgag ttattcaaaa cctttaaatt aatacctaag caatttgatc gcatggttaa
      181 taacatgcgt gaaatgatgg acagagttcg cgttcaagaa cgtcttatca tgaaacaagc
      241 agtacaaatt gctaagttac caaagaaaac gtttgttaag cactttgcta ataacgaaac
      301 ggatgctact tgggttgatt tagaaattgc agctaacgaa aagtactcgg caaaacttga
      361 agaagttaag cctgagatca ttcgtagtct gaataaatta cgtgttattg aaagtagcac
      421 tggcttaaat attgagcgta taaaagacat aaaccgtcgt atgagtattg gtgaagctaa
      481 agctcgccgt gcgaaaaaag agatggttga agctaactta cgtttggtaa tttcaattgc
      541 taaaaaatat acaaaccgtg gtttacagtt cttggattta attcaagaag gtaatattgg
      601 tttgatgaaa gccgttgata agtttgaata tcgccgtggt tataagttct cgacctatgc
      661 cacttggtgg attcgtcagg cgatcacacg ttcgatcgct gaccaggcac gcaccattcg
      721 tattccggtg cacatgatcg aaaccatcaa caagatgaac cgtatcaacc gccagatctt
      781 gcaagaaacc ggtgctgagc ctgatcctgc gacactggcc gccaagatgg acatgccaga
      841 ggacaagatc cgcaagatct tgaaaatcgc caaagagccg atttccatgg aaacgccgat
      901 tggtgatgat gacgattcac atttgggtga tttcatcgag gatctcatta cactggcgcc
      961 agccgattca gcgttgcatg gctctatgcg tgatgtcgtc aaagaggtgc ttgattcatt
     1021 gacaccgcgt gaagccaagg tgctacgcat gcgtttcggg gtggaaatga gctcagacca
     1081 gacgcttgaa gaggttggca agcagtttga tgtcacgcgc gagcgtattc gtcaaataga
     1141 ggctaaggca ttgcgcaagt tgcgccatcc aagccgtgca gacaagctgc gcagtttctt
     1201 ggaaaaccag taatccagag gtcgcgatgt caactttcac acaaaaggtg ttgcccgcca
     1261 ttctgatctc cggcggtttg acagtcggtg gttggtttgt tgggcaaggc cttgaaagct
     1321 ttcgtcaggc agagcgtttc atcacgatta aaggcttggc tgagcaagac gttaaaagtg
     1381 acttcgcgat ctgggggctg tcgtttcgcc gcgcaggcga ggactaccaa caggtcagat
     1441 ctgaattaac caccgaccgt gaggcggtgg tggcatttct gcaagagcaa gggttcacag
     1501 ctgatgagat tgaagccagg cccttgcgca ttaccgatct gatggcgcgt gagtatggcc
     1561 agcaagaggt agctctacgt tacaccggcg aaggttcggt gctggtgcgc tcgtctcgtg
     1621 ttgatttggt ggccaaggtg tctaatgcca ttgatccgtt gattaccgct ggcgtgccgc
     1681 tgtcgcaaga aggtccaggc ggtggtccac cgcgctactt cttgcgtggc tttaatgatg
     1741 tcaagcctga gttgcttgag caggcggtca ataatgcacg cgaacaagca gaaaagtttg
     1801 ccgctgatgc tggtgccgat cttggccaat tgcgtcgtgc caatcagggc accattcaaa
     1861 tccttgatga tgacggctct gacggttaca gttcaggact gaccagtggc aaacgcgtgc
     1921 gtgtggtcag tacttttgaa tacttactgc agtaggggat gagcatgcga ggagacggtc
     1981 gtggtcgcta agcgggtcaa gaaatacctg ccggcctcgg acaaggtctc gcagcacaag
     2041 atgttgcgtt ggctcgggcc tacgctgacc aagcctagtc tatggcagat caaccgccgt
     2101 agcattgcca tggggttggc cattggtgtg ttctggggtt ttcttattcc tgtggctcag
     2161 atcgtgtttg ctgccatcat ggccgtattt ctgcgggcca acttacccat ggccatcggc
     2221 agcacgctgg ttacgaaccc ggtgacattt gcaccggtct actttctggc ataccagttc
     2281 ggtgacttcg tgctcggtaa gtctggaccg gatgtgaccg aagagatgtt ggcggcacag
     2341 atgggccaaa tcagtgtcac gagcgcgggc tggatcgatc gtattggtga tgttgccgcc
     2401 cctcttttta ccgggctcgt ggtgtttgcc agcgtagggg cggtattgag ctatgtggtc
     2461 gtcagcctgc tatggcgact cgcggtggtg ttgcgttacc gcaagcgcct
//
LOCUS       DATBNL010000492         6215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_194893, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000492 DATBNL010000000
VERSION     DATBNL010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6215
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194893"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..1275
                     /locus_tag="VIC30_08580"
     CDS             328..1275
                     /locus_tag="VIC30_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020067977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEY7804471.1"
                     /translation="MKLVFLDSDTLPHPIKQPDWITEWVNLPATPQTTDAVVDALTDA
                     HICITNKIRITPAILAKCPSLKYICVAATGYDCIDLQACREHGVAVSNVPGYSKQSVA
                     ESVIASIFALRRNLMSYARIGPNTWSDSPHFCVHDRPIQDVTGATLGIIGQGAIGSEV
                     ARLASALGMQVLFAEHRGKHDVRDGYTRFETLIASADVISLHCPLTPATQGLIGQAEV
                     AHMKPGALLINTARGPLVNEDAVLDGLQTGHLGGAALDVLVTEPPSGQEPLLTLNHPN
                     LIITPHVAWAAHDGQARLAQGIGTNLEAFHTGKPINIVN"
     gene            1282..2184
                     /locus_tag="VIC30_08585"
     CDS             1282..2184
                     /locus_tag="VIC30_08585"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7804472.1"
                     /translation="MNATANKPWAAHAKLAFVAFCWGSAMIAGRVIAVDVPVLMAATI
                     RLAIAAGVLLVLLRGQGPMPRVSRAELMAIGAMGLAGVFTFNVMFFSALQTIPASKGA
                     LIVALIPVLTALIMAIVLKEAISLRRWLGIGLALAGVSIVVTGGDMRLLTTYLGGMLG
                     TGEGLMLLAALGWVTYTVISRLAVKGLSPLAASTYAAIVGFVLLAVALAADPSAWRLD
                     WLSLKTAAALVYIATFGTALPYVWFVQGVQQLGAARTAVYINLTPVFGVSLGFIVLDE
                     AIDWSMLIGGLIVITGVTLTNRSK"
     gene            2201..2758
                     /locus_tag="VIC30_08590"
     CDS             2201..2758
                     /locus_tag="VIC30_08590"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY7804473.1"
                     /translation="MLATSLNGFTAQSTVSTSRAWRYLAQMLMVLALCAASLSANAIE
                     VGDKLVINDLKTIDGQTLTSEDLKDKYLVVQVWATWCPYCHRQNINLIELVNRTQGLP
                     IQVIALSIDRKAGAVPPYVEKHAINFPVAMMTPELDKAIGKRQGVPELYVIDPEGYVV
                     QKDYGEMVDLDVWDLIDYVKPAEPS"
     gene            complement(2771..3697)
                     /locus_tag="VIC30_08595"
     CDS             complement(2771..3697)
                     /locus_tag="VIC30_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009517420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY7804474.1"
                     /translation="MRKSFAVLAMCWGVLAGASEVPKLELQQVSEHAYYAEGLFELGT
                     PLNQNFISNAGVVVAPEGVVVIDALGSPALAERLVQEIRKITDKPIEYVIVTHYHADH
                     VYGLQVFKDLGAKVIAQEQGKLYLTSETAKLRLEVSREELAPWVNNDTRLQAADIWVV
                     NDEQLMLSGWQFDLLKVGPAHTADDISVFVPEENVLFAGDLMFQGRIPFVGNADSAGW
                     IASLERLMTLNPDVVVPGHGPYSTNPAEDLKFTRDYLQYLRDTMREPALDLELFDDAY
                     KAADWSPYEGYPLFRAANRMNAYNVFLSIQSE"
     gene            complement(3834..4277)
                     /locus_tag="VIC30_08600"
     CDS             complement(3834..4277)
                     /locus_tag="VIC30_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HEY7804475.1"
                     /translation="MKAIWTLGLAAAIGMASLTPVSVQAQEDYKPKVVYHLDNTQLNG
                     LKALRNMRNHLNTAPETDIVLVMHSGGVDLMFEGATHGQSETAFGPLIADLKSRGVDF
                     QVCEITLQRRNLSKDQFVLETSFTPSGVVALTDLQLKEGRAYIKP"
     gene            complement(4418..6145)
                     /gene="soxB"
                     /locus_tag="VIC30_08605"
     CDS             complement(4418..6145)
                     /gene="soxB"
                     /locus_tag="VIC30_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfohydrolase SoxB"
                     /protein_id="HEY7804476.1"
                     /translation="MNRREFMQILALASAAGMVLKPGMANAQAAANTFYDLPKFGNVH
                     FLHFTDCHAQLNPIYFREPNVNLGFGTMYDRPPHLVGEYLLKHYNIAPDTRDAHAFTY
                     LNFTEAAQQYGKVGGFAHLATLVKQLKASRPGALLLDGGDTWQGSGTALWTDGQDMVD
                     AALLLGVDVMTAHWEMTLGEDRVMEIVNNDFADKVSFVAQNIKTTDFEDPVFDAYTMR
                     EMNGVKVAVIGQAFPYTPIANPRYLVENWSFGIDEENMQDTVDDARSNGAQVVVVVSH
                     NGMDVDLKMASRVTGIDAIMGGHTHDGVPAPVKVQNPGGVTLVTNAGSNGKFLGVLDF
                     DVKDGKVSDFRYKLLPVFSDLITPDAEMTALIQRVREPHEAKLNEVLATTQELLYRRG
                     NFNGTFDQVIVDALMKVKDAQIAFSPGFRWGTTLLPGQEILMENVLDQTAITYPWSTV
                     APMSGEMIKTVLEDVADNLFNPDPYYQQGGDMVRVGGLEYTIDPAADFGKRISDMTLD
                     GERIDPSKEYTVAGWAPVSEQARDQGGEPIWDVVAGYLRDEKVIKDVKLNEPKIIGAK
                     DNPGYAPLS"
BASE COUNT         1459 a         1780 c         1554 g         1422 t
ORIGIN      
        1 acagtcgtct catgggccta tcaatcgata ccagacaacc aaatcgtttg ttcattgttt
       61 cgtatgacgc aatagatggt ggcgtaaggt cagggaaatc accttttaac ggtcacaagg
      121 ttaccgcaat ccgctgcgct ctgaaacgaa ttgcctgatg tttgaacgtt tttaaacgcc
      181 aaagttcaca tcaactcaat catgcagtgc gtgggcgtga ttaaatctaa gtatcaacta
      241 gatccataga cctaaaagac ctaaaaaatc caaaccacat agacttcccg agcatcccgc
      301 acatcgactc aatccaagac ccagcccatg aaactcgtat tcttagacag cgacacctta
      361 ccccacccga tcaagcaacc cgactggatc accgaatggg tcaacctgcc agcgacccca
      421 cagaccacgg acgccgttgt ggatgccttg accgatgcac acatctgtat caccaacaag
      481 atccgcatca caccagcgat tctggccaaa tgcccgagcc tgaaatacat ctgcgtggcc
      541 gcgaccggtt atgactgcat tgacttgcaa gcgtgccgcg agcacggtgt ggcggtcagc
      601 aatgtgccgg gttactccaa acaaagcgtc gcagagagcg tcatcgcgag tatttttgcg
      661 ctcagacgaa acctcatgag ctatgcccgg attggcccaa acacctggtc ggactcgccc
      721 cacttttgtg ttcacgacag accgattcaa gatgtcactg gtgccacgct tggcatcatc
      781 ggccaaggtg ccattggcag cgaagtcgcc cggcttgcca gcgcactggg tatgcaagtt
      841 ttgtttgccg agcatcgtgg caaacatgac gtgcgcgacg gctacacccg cttcgagacg
      901 ctaatcgcta gcgccgatgt cattagcctg cactgccctt tgacacctgc cacgcaaggc
      961 ttgattggcc aggccgaagt cgcgcacatg aaacccggcg cactgctgat caacaccgca
     1021 cgcggcccct tggtcaatga agacgcggtg ctcgatggcc ttcaaacggg ccacctcggc
     1081 ggcgcagcac tcgatgtgtt ggtcacagag ccgccttctg ggcaagagcc cttgctaaca
     1141 ctcaatcacc ccaacctcat catcacgccc cacgttgcat gggcagcgca tgacggtcaa
     1201 gcccgtctgg cacagggcat tggcaccaat cttgaagcat ttcatacggg caaacctatc
     1261 aacattgtga attaagcggc ggtgaacgcc actgcaaaca agccctgggc ggcacacgcc
     1321 aaactggcct ttgttgcttt ctgttggggc agcgccatga tcgccgggcg cgtcattgct
     1381 gttgacgtgc ccgtgctaat ggccgcgacc atccgtttgg ccattgccgc tggcgtactc
     1441 ttggttttat tacgtggcca gggaccgatg ccgcgcgtct cacgcgcaga actgatggcc
     1501 attggcgcca tgggcctagc aggcgttttc acatttaatg tgatgttttt ctcggcactg
     1561 caaaccatcc cggcaagcaa aggtgcctta atcgtcgcac tgattcctgt gctcaccgcg
     1621 ctgatcatgg ccatcgtgct caaagaggcc atcagcctgc gccgctggct gggcatcggt
     1681 ttggcattgg ctggtgtctc catcgtggtg acaggcggtg atatgcgcct attgactacg
     1741 tatttgggtg gcatgttggg cactggtgaa ggactaatgc tgcttgcggc tttgggctgg
     1801 gtgacatata cagtgatcag ccgcctggca gtcaaaggat taagtccgct tgcagcaagc
     1861 acctacgccg cgatcgtggg gtttgtgctg ctggcggtgg ccttggcggc cgatccgtcg
     1921 gcttggcgac tcgattggct aagccttaaa actgctgcgg cattggtcta cattgccacc
     1981 tttggcacgg cactgccgta cgtttggttt gttcaaggcg tccagcagtt aggcgccgcg
     2041 cgcacggcgg tgtacattaa tctcacgccg gtatttggcg taagcttagg gtttatcgtc
     2101 ctcgatgaag ccatcgattg gtccatgttg atcggtggcc tgatcgtcat taccggtgtc
     2161 acattaacca atcgttccaa atagacatga ggattccatc atgcttgcca catcacttaa
     2221 cggtttcacc gctcaatcaa ccgtgagcac ctctcgcgcg tggcgctact tagcgcaaat
     2281 gctcatggtc ctggcgcttt gcgcggctag tctgtcagcc aatgccatcg aagtgggcga
     2341 caagctcgtg atcaacgacc ttaaaaccat tgatggtcag accctcacaa gcgaagacct
     2401 aaaagataaa tacctggtgg tgcaggtctg ggcgacctgg tgcccctact gccaccgcca
     2461 gaacatcaat ttgattgagt tggtcaaccg cactcaggga ttgcctatac aggtcattgc
     2521 gctgtcaatt gatcgcaagg ccggtgcagt accaccttat gtcgagaagc atgccatcaa
     2581 tttcccggtg gccatgatga caccggagct tgataaagcc atcggcaaac gccaaggtgt
     2641 cccggaactc tacgtcattg acccagaagg ttatgtcgtg cagaaggact atggtgagat
     2701 ggtcgatctc gatgtctggg atctgattga ctacgtcaaa ccagctgagc caagctagaa
     2761 gcaagggata ttactcagac tgaatcgaca aaaagacgtt gtaggcattc atgcggttgg
     2821 cagcccgaaa tagcgggtag ccctcatacg gtgaccaatc tgcagcctta taagcatcgt
     2881 caaagagctc taagtccaga gcgggttcac gcatggtgtc acgcagatat tgcaagtaat
     2941 ccctcgtgaa cttcaagtct tcagcgggat tggtggagta agggccatgg cctggcacca
     3001 ccacatcagg gtttagtgtc atgagtcgtt cgagagacgc gatccacccc gcgctatcgg
     3061 cattgcccac gaacgggata cgtccctgga acatcaagtc tccggcaaac agcacattct
     3121 cttctggcac aaacaccgaa atatcatcgg ccgtatgggc tggaccgacc ttgagcaaat
     3181 caaattgcca gccacttaac atcaattgct catcgttgac cacccagatg tcagccgctt
     3241 gcaggcgcgt gtcattattc acccagggcg caagctcctc acgtgacacc tcaagccgca
     3301 acttggcggt ttcagaggtc agatatagct tgccttgttc ttgggcaatg acttttgcgc
     3361 ccaggtcttt gaacacctgc agaccgtaaa cgtgatccgc gtggtagtgc gtcacaatca
     3421 cgtactcaat aggcttgtcg gtaattttac ggatctcttg gaccaatcgt tcagccagcg
     3481 ctggcgaacc cagcgcatca atgaccacca caccttcggg tgccaccacc acaccggcgt
     3541 tcgatatgaa gttttgattc agcggggtgc caagttcgaa taagccttcg gcgtaatacg
     3601 catgctcgct gacttgttgc aactcgagtt tgggcacctc actggcgcct gccaaaacac
     3661 cccagcacat ggccaatacc gcgaacgact ttctcatgct ttgcctccaa attcgcgctg
     3721 tatcgtgaat cactccaacg cgaatcacta caacaatacg ccacaagcct ggtgcagcct
     3781 cgttaacacc attgccaagt gaggctgcac taccctgcac tactttgtac tactcagggc
     3841 ttgatatacg cgcgcccttc ttttaactgc aagtcagtta aagcgaccac accggatggt
     3901 gtgaaactgg tctcaagaac aaactggtct ttgctcaaat tacggcgctg taacgtgatc
     3961 tcgcaaacct ggaaatcaac accacgcgac tttagatcgg caattaaagg accaaacgcg
     4021 gtttcagatt gcccgtgcgt ggctccctca aacatcaaat ccacgccacc ggagtgcatc
     4081 acaagcacga tgtcggtctc aggtgcggta ttgaggtggt tgcgcatgtt gcgtaacgct
     4141 ttcagaccat tgagttgcgt gttgtcgagg tgatagacca ctttcggctt gtaatcctct
     4201 tgcgcttgca ctgaaaccgg tgtcaagctc gccatgccaa tggccgcagc cagccctaat
     4261 gtccagattg ctttcatcgt tgtctccttg ttttttaatc actctatcag ctattactag
     4321 cctactaacc taccagccta cttcacacta caagcaataa cggcggagtt tgaaccccgc
     4381 cgttaggcct acttcattta atcacaaccg cgcacgctta gctcagtggc gcgtagcccg
     4441 gattatcttt agcgccgatg atcttgggtt cgttgagctt gacatcctta atgaccttct
     4501 cgtcacgcag gtaaccggcc acgacatccc aaatgggctc accaccttga tcacgcgcct
     4561 gctctgaaac tggcgcccaa ccggcaactg tgtactcctt gcttggatcg attcgctcgc
     4621 catccagtgt catgtccgat atgcgcttac cgaagtcagc agccggatcg atcgtgtact
     4681 caaggccacc cacacgcacc atgtcaccac cttgctggta gtaaggatct gggttaaaga
     4741 ggttgtctgc cacgtcttcg agcacggttt tgatcatctc accggacatg ggtgcaaccg
     4801 tgctccaggg ataagtaatc gcggtctggt caagcacgtt ctccatcagg atctcttgcc
     4861 caggcaacaa cgtcgtaccc caacggaaac caggcgagaa ggcaatctgc gcgtccttga
     4921 ccttcatgag cgcatccacg atgacttggt caaatgtgcc attgaagtta ccgcgacgat
     4981 agagcagttc ttgcgttgta gccaacacct cgtttagctt ggcctcgtgc ggctcgcgca
     5041 cgcgttgaat caaagccgtc atctctgcgt cgggcgtgat caaatccgag aacacaggca
     5101 acagcttgta acggaaatca gagaccttgc catccttgac gtcaaagtcg agcacaccta
     5161 gaaacttgcc gtttgaaccg gcgttggtga ccaaggtcac gccacctggg ttttgtactt
     5221 tgaccggtgc gggcacgcca tcgtgcgtgt ggccacccat aatcgcgtca atgccagtga
     5281 cacggctagc catcttcaag tcgacgtcca tgccgttgtg tgacacgacg accactactt
     5341 gcgcaccatt agaacgcgca tcatcgacgg tgtcttgcat gttctcttcg tcaataccaa
     5401 acgaccagtt ctcaaccaga tagcgggggt tagcgatcgg cgtgtatggg aatgcttgcc
     5461 caatcacggc aactttgacg ccattcatct cacgcatcgt ataagcgtca aacacagggt
     5521 cttcaaagtc cgtggtcttg atgttctgcg caacgaacga cactttgtct gcaaagtcgt
     5581 tattgacgat ttccatgacg cggtcttcac ccaacgtcat ttcccagtgc gcggtcatca
     5641 catccacccc gagcaataag gctgcgtcaa ccatgtcctg cccatcggtc caaagtgccg
     5701 tgcctgaacc ctgccaggtg tcgccaccgt caagcaacaa ggcacccgga cgtgaagctt
     5761 tcaactgctt aaccagcgta gccaagtgcg caaagccacc aaccttgccg tactgctggg
     5821 ccgcttcggt gaaattcaag taagtaaagg catgcgcatc acgcgtatca ggcgcgatgt
     5881 tgtagtgctt tagaagatat tcgccaacca agtggggagg acggtcatac atcgtgccga
     5941 aacccaagtt gacattgggc tctcggaaat agattggatt gagctgagcg tggcaatcag
     6001 tgaaatgcaa gaagtggacg tttccgaact taggcaggtc atagaacgtg ttggcagcgg
     6061 cctgcgcatt ggccatgcca ggcttgagca ccataccagc ggccgatgcc aacgccaaaa
     6121 tctgcataaa ttcacgacgg ttcatactca tagttcaatc caaccttgaa aatagaaaag
     6181 ggtccgaaga ccccttttaa aagagaactg cttaa
//
LOCUS       DATBNL010000493         2173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_95616, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000493 DATBNL010000000
VERSION     DATBNL010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95616"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /locus_tag="VIC30_08610"
     CDS             <1..789
                     /locus_tag="VIC30_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003806951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEY7804477.1"
                     /translation="PIGRTPRSNPATYTGLFSPIRELFAGVPESRARGYDPGRFSFNV
                     KGGRCEACQGDGMVKVEMHFLPDMYVPCEVCHGKRYNRETLEIRYRGKNIHEVLNLTV
                     EQALPYFDAVPAIARRLQTLLDVGLSYLRLGQSATTLSGGEAQRVKLSLELSKRGNGQ
                     TLYVLDEPTTGLHFHDISLLISVLNKLVDAGNTVVIIEHNLDVIKTADWIVDMGPEGG
                     DGGGQIVAQGTPEQITKQTGSHTGQYLKTLLEREQGRRKTVAAT"
     gene            complement(794..1387)
                     /locus_tag="VIC30_08615"
     CDS             complement(794..1387)
                     /locus_tag="VIC30_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804478.1"
                     /translation="MLRLIQCVPVLAVGIVFAAMAQTQTAQAQSTRAQTTDTSELSLY
                     IVEQCASLSQGGRCRLEFVQVPTGLTPTAKVSQTCAPGWLVHLTAERGTVEKGGINRG
                     QAVVCGHTDPESAIRSAMIACDEQTFGICQDADYVNVQWGFWSGDDAALMKLVMDEPL
                     PIEQLPKAQQCASAVPLVESASCPPTAAVLLRQSGLR"
     gene            complement(1415..>2173)
                     /locus_tag="VIC30_08620"
     CDS             complement(1415..>2173)
                     /locus_tag="VIC30_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEY7804479.1"
                     /translation="HNLQSLRVVDELEERYPDFDGLNLCFETREGILKHCSLSNARKL
                     GDVGQRFIDRTQPSLEAQLANLADEIAYNNHDIDDGLRSGLITLEQLLEVPIVAQHFE
                     VVKRRWPDLAQKRAIAETIRQMINTLIMDVTTTTQANLRQASPASANEAKHCPPLVAF
                     SPAVRAQADELKRFLLKALYRHYRVLRMTGKAKRVVRALFEAFLTEPGLLPPDHRREH
                     RTEQARAIADYIAGMTDRYAMLEHKKIFNMEESL"
BASE COUNT          506 a          620 c          575 g          472 t
ORIGIN      
        1 cctattggtc gcacacctcg cagtaacccg gccacttaca caggtctgtt ctcaccgatt
       61 cgggagttgt ttgccggtgt gcccgaatcg cgcgcacgcg gatacgaccc tggtcggttt
      121 agctttaacg tcaaaggcgg gcgctgcgaa gcctgtcagg gcgatggcat ggtcaaggta
      181 gagatgcact tcctgccaga catgtatgtg ccttgcgagg tctgtcatgg caaacgctat
      241 aaccgagaaa cactcgagat ccgctatcgc ggcaaaaaca tccatgaggt gctcaacctc
      301 acggtggaac aagcgttacc ttacttcgat gcagtgccgg ccatcgcccg acgactacag
      361 accctgctcg acgtgggtct gtcttatctt cggcttggtc aaagcgcaac tactttgtcc
      421 ggtggcgagg cgcaacgcgt gaaactgtcg ctcgaactgt ctaagcgagg taatggccaa
      481 acgctttatg tgctggacga acccaccacg ggactgcact ttcatgacat ttccctgctg
      541 atctcggtgc tcaacaagct cgtagatgcc ggtaacacgg tggtgatcat cgagcataat
      601 ctcgatgtca tcaaaaccgc agactggatt gtggatatgg ggccagaagg cggtgacggc
      661 ggcggacaaa tcgtggcaca aggcacgccc gaacaaatca ccaagcagac cggcagtcac
      721 accggtcagt acttgaagac cctgcttgaa cgcgagcaag gtcggcgtaa aactgttgcc
      781 gcgacttaac cgcttagcgc aaaccggact ggcgcaacaa caccgccgct gtcggtggac
      841 agctcgctga ctccacgagt ggtaccgctg aggcgcattg ctgagccttc ggcaactgct
      901 cgataggcaa aggctcgtcc atgacgagct tcatcaacgc cgcatcatca cctgaccaga
      961 aaccccattg cacgttgaca taatctgcat cctgacaaat accaaacgtc tgctcatcac
     1021 aagcgatcat ggctgagcga atcgcagact ctggatctgt gtgcccgcaa accacagctt
     1081 ggccacggtt gataccgcct ttttccaccg tgccacgctc ggctgttaag tgaaccaacc
     1141 aaccaggcgc gcaggtttgg ctcaccttag ctgtgggcgt caaaccagtc ggtacttgga
     1201 caaactctaa acggcaccgc cccccttgcg atagcgaggc acactgctcg acgatgtaga
     1261 gcgatagctc actggtatcg gtggtttgag ctcgtgtgct ttgtgcctgg gctgtctgtg
     1321 tctgcgccat ggcagcaaag acgataccga cagctaaaac aggtacgcat tggatcagtc
     1381 gcaacatgtt gccctccctt ctatttcaaa acctctacaa agactcttcc atgttgaaga
     1441 tttttttgtg ctccaacatg gcgtaacgat cggtcatgcc agcaatatag tcagcaatgg
     1501 cacgggcctg ttcagttcga tgctcgcggc gatgatccgg tggcaatagc ccaggctcag
     1561 tcaagaacgc ttcaaacagc gctctgacca cccgcttggc tttgcctgtc atgcgcaaga
     1621 cgcgatagtg gcggtacagc gccttaagta aaaatcgctt gagctcgtca gcttgggcac
     1681 gcacggctgg tgaaaacgcc acaagcggcg gacagtgttt ggcctcattg gccgaggcgg
     1741 gactggcttg gcgcaaattc gcctgcgtgg ttgtagtgac atccatgatc aaggtattga
     1801 tcatctggcg tatggtctct gcaatcgccc gcttttgtgc aagatcaggc caacgacgct
     1861 taacaacctc aaagtgctgt gccacgattg gtacctcgag taactgctcg agggtgatca
     1921 gccccgaacg caatccgtca tcaatgtcat gattgttata ggcaatttca tcggccagat
     1981 tggccagctg agcctccaag gagggttggg ttcggtcaat aaaacgctgg cccacatcac
     2041 caagcttgcg tgcattgctt aacgagcaat gcttcaaaat gccctcccgg gtttcaaagc
     2101 aaagattcag cccgtcgaaa tccggataac gctcctcgag ctcatcgacc acgcgcagac
     2161 tctgcaggtt atg
//
LOCUS       DATBNL010000494         1555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_65880, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000494 DATBNL010000000
VERSION     DATBNL010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65880"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..690
                     /gene="tmk"
                     /locus_tag="VIC30_08625"
     CDS             52..690
                     /gene="tmk"
                     /locus_tag="VIC30_08625"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004567168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEY7804480.1"
                     /translation="MASLAGRFLTFEGVDGAGKSTHVNRVCDVLRQAGVEVCQTREPG
                     GTALGEKLRELLLHDAMHLDTETLLMFAARREHLKSCIEPALAKGQWVVCDRFTDATF
                     AYQGGGRQLGVDRVKVLANWVHPGFAPDRTWLFDVPLDVARQRLSDSRTLDRFEQEQE
                     AFFERTRAVYLGQVRQEPERFKVIDGTQTIPEIAALLEDDVLGLVKQWQERR"
     gene            691..>1555
                     /gene="holB"
                     /locus_tag="VIC30_08630"
     CDS             691..>1555
                     /gene="holB"
                     /locus_tag="VIC30_08630"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEY7804481.1"
                     /translation="MTAFLPWQLDDARRLLADTDHLPHALLIHGLPGMGKREFALALA
                     TTLLCEDQQDGLACGKCQGCIWMAGGTHPDFKQVRPEAVAAREGAALADDEATTSATE
                     GVGAGAGTGTAKRKPSEELRIEQIRALESWYHQATHRGGWRVVVLYPAEALSVVSANA
                     LLKALEEPPANTLFLLASDAPDRLLPTLVSRCQKFALKLPGKDQCVHWLTQNGVDKPQ
                     AWLAAAGGAPLAALQLAQSGQSACPDWATELITSLAQGKAVDLPGLADNLAKGHASGW
                     LAIMQRLAIDLG"
BASE COUNT          331 a          393 c          487 g          344 t
ORIGIN      
        1 ctgcgacaac acaatcgcaa cgtggcgaaa tacattctgg gaaagtgatt catggctagt
       61 ctagcgggac gatttctgac attcgaaggc gtagatggcg ctggtaaaag cacccatgtt
      121 aatcgtgtgt gcgatgtttt acgacaggcc ggcgttgaag tttgccagac gcgtgaacca
      181 ggcggcacgg ccttgggtga gaaattgcgt gaattactgc tgcatgacgc catgcacctc
      241 gataccgaga cgttactgat gtttgctgct cgccgcgagc acctcaaaag ctgcatcgaa
      301 ccagccttag ctaaagggca gtgggtcgtg tgcgaccgct ttaccgatgc tacattcgcg
      361 tatcaaggcg gcggcaggca actcggtgtt gaccgggtca aggtgcttgc aaattgggtg
      421 cacccaggct ttgcgcctga ccgcacatgg ctttttgatg tgcccttgga tgtggctcgc
      481 caacgcctaa gcgacagtcg gacactcgat cggtttgagc aggagcaaga agcttttttt
      541 gaacgaacac gggccgttta ccttggtcaa gtgcgccaag aacccgagcg ttttaaggtc
      601 attgacggta cgcagacgat ccctgaaatc gcggcactgc ttgaggacga cgtcctgggg
      661 ctcgtcaaac agtggcagga gcgtcgctag atgacggctt ttttgccgtg gcagcttgat
      721 gatgctaggc ggctattggc cgacacggat catttgccgc atgcgctact catacacggg
      781 ctgcctggga tgggcaaacg tgagtttgca ctggcactgg ccaccaccct cctgtgtgaa
      841 gatcagcaag acggtctggc gtgtggcaag tgtcagggtt gcatctggat ggccggtggc
      901 acgcaccctg atttcaagca agtgcgccca gaagccgtgg cagcccgaga gggtgcggcg
      961 ctagcagacg atgaggcaac caccagtgcg accgaagggg tgggtgcagg ggcaggaacg
     1021 ggtacggcca aacgcaaacc ctctgaagag cttaggattg aacaaatccg tgcacttgag
     1081 tcttggtatc atcaagccac gcatcgcggt ggctggcgtg tggtggtttt gtatcccgct
     1141 gaggcgctgt ccgtggtgag cgccaatgca ttgcttaaag ccttagaaga gcctcctgct
     1201 aatacgttgt ttctgttggc cagtgatgcg ccggatcgat tgttaccaac gttggtgtcg
     1261 cgctgccaga agtttgcgct caaactgccg ggtaaagacc agtgtgtgca ttggttgaca
     1321 caaaacggtg tggataaacc ccaagcctgg cttgcggcgg ccggcggggc gcctttggcg
     1381 gcgttgcaat tggcccaatc gggtcagtca gcatgcccag attgggccac tgagcttatt
     1441 accagtttgg cacagggcaa agcggtcgat ctgccaggat tggccgataa tttagccaaa
     1501 ggccatgcca gcggctggtt agctatcatg caacgcttgg cgattgactt ggggt
//
LOCUS       DATBNL010000495         2274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_75825, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000495 DATBNL010000000
VERSION     DATBNL010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75825"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1409
                     /locus_tag="VIC30_08635"
     CDS             <1..1409
                     /locus_tag="VIC30_08635"
                     /inference="COORDINATES: protein motif:HMM:NF021824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /protein_id="HEY7804482.1"
                     /translation="SVESLLVREAVTGTPEMTVHEAARRMTDEGVSSLLITEDDAPVG
                     MITDRDLRTRALAQGLALETPVRDIMTESLVNVRHDQLAFEAMHLMMRNNVHHLPVLK
                     HQQAIGVLAQSDIIRYESRNSLFVVGRIFHQQSVDDLAALGEEVQASFVRMVREDFSA
                     KIIGSAMAAIGRSFKQRLLELGEAELGRPPVPYCFLALGSMARQEQLIVTDQDNAMIL
                     DNRFDADQHDAYFEALAKFVTDGLARCGYPYCTGDIMATNSKWRQPLHVWQGYFKTWI
                     EQPTAASLLDSNIFFDLDGVYGRTDFAETLRVTIARTAKGNSRFLASMARNALQRTPP
                     IGFFKEFVVEPDGRHTRAINLKRRGTAPLTDLIRVHALAIGSRNRNSFDRIADIIKAG
                     ILPNGRGQDLHDALEFISMARARNQANELTSGQQADNSIEPDMLSDFERKNLRDAFMI
                     LSNAQKFLKFRYQPGRVN"
     gene            1507..2250
                     /locus_tag="VIC30_08640"
     CDS             1507..2250
                     /locus_tag="VIC30_08640"
                     /inference="COORDINATES: protein motif:HMM:NF006602.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY7804483.1"
                     /translation="MQLPTDNRPTGQTGRDWAGRFMALAEQTKDERLKAYYAAGMPSG
                     DTPIKDVPLMAMDVETTGLNPAKDGIVSVGILPMNLDRIQSSASRHWFVQPHVPLADE
                     SVTIHGITHSQLADAPELVDILGDLLEAISGHVLVVHCRAIERQFLNNALTRMIHEPI
                     EMPMIDTMELEARLYRNRKPLSWWDRVIRKKQQKNVSIRLADSRVRYGLPFYKPHHAV
                     TDALATAELLQAQIAHRFSPDTPLNELWC"
BASE COUNT          533 a          660 c          596 g          485 t
ORIGIN      
        1 cctcggtcga aagtctgttg gtgcgcgaag ccgtgacagg cacgcctgag atgaccgtgc
       61 atgaagcagc cagacgcatg accgatgaag gcgtgtcgtc gctgctgatt accgaagatg
      121 atgcgccggt gggtatgatt accgatcgcg atttgcgcac gcgtgcgctg gcgcaaggtc
      181 tggcgctcga gacaccggtg cgagacatca tgaccgagag tctggtcaat gtgcgtcacg
      241 atcaactggc ctttgaagcc atgcacctga tgatgcgcaa caacgtgcat cacctgccgg
      301 tgctcaagca ccagcaggcc attggcgtac tggcccaatc cgacatcatc cgctacgaat
      361 ctcgcaacag cctgtttgtg gtgggtcgga tatttcatca acagtccgtt gatgacctag
      421 cggccttagg cgaagaggtg caagcaagct tcgtgcgcat ggtgcgcgaa gactttagcg
      481 ccaagatcat tggtagtgcc atggccgcca ttggtcgcag tttcaagcaa cggttactcg
      541 aacttggcga ggctgagctt ggccgcccgc ccgtgcctta ttgcttttta gcgcttggca
      601 gcatggcacg ccaagaacaa ttgattgtca ccgatcaaga caacgccatg atcctggaca
      661 accgctttga tgctgaccaa cacgacgcct actttgaagc gcttgccaag tttgtcaccg
      721 atggcttggc gcgttgtggc tatccgtatt gcaccggcga catcatggcc accaattcta
      781 agtggcgcca acccttgcat gtctggcagg gttacttcaa aacctggatt gagcaaccaa
      841 cggctgcctc gctgcttgat agcaatatct tctttgacct tgatggtgtg tatggccgca
      901 cagatttcgc agaaacctta cgtgtgacga ttgcccgaac cgccaaaggc aactcacggt
      961 ttctagccag catggcgcgc aatgcattgc aacgcacccc gccgattgga ttctttaaag
     1021 aattcgtggt tgaaccggat ggtcgccaca cacgcgccat caatctcaaa cgtcgcggca
     1081 cagccccact gaccgatttg atccgggtgc atgcgttggc aattggttca cgcaaccgca
     1141 actcgtttga ccgcatcgcc gacattatca aagccggcat cttgcccaac ggtcgcggcc
     1201 aagacctgca tgacgcgctt gagttcatct ccatggcacg cgcacgtaac caggccaatg
     1261 agctgacctc aggtcaacag gcagacaaca gcattgaacc ggacatgctg tcagattttg
     1321 agcgcaagaa cttgcgcgat gccttcatga tcttgtccaa tgcccagaag tttcttaagt
     1381 tccgttacca gcccggtcgg gttaactgat ctagccaaac cataccgacc aaaataggtc
     1441 gaccaagcag gtcaaccaac acaggtcaac caaggagcat gcgttttgtt gtacggtggc
     1501 agtcttttgc agttaccaac agacaaccgg cccactggcc agaccggccg tgactgggcg
     1561 ggccggttta tggcgttggc cgaacaaacc aaagacgagc gtcttaaagc ctactatgcc
     1621 gctggcatgc catcgggtga cacacccatc aaagacgtgc cgctcatggc aatggatgtc
     1681 gagaccacgg gtttaaatcc cgccaaggac ggtattgtca gcgtcgggat tttgcccatg
     1741 aatctcgatc gaatccagtc aagtgcctcg cgccactggt ttgtgcaacc acatgtaccg
     1801 ttggcagacg aatcggtcac cattcacggc atcacccatt cgcaactggc cgacgcgccc
     1861 gagcttgtag atatcctggg ggatctgctc gaagcgatct ccggccatgt gttggtggtg
     1921 cactgtcgcg ccatcgaaag gcagtttctg aacaatgcgc tcacgcgcat gattcatgag
     1981 cccatcgaga tgcccatgat tgacaccatg gaacttgaag cccgcctgta tcgcaaccgt
     2041 aagcccttga gctggtggga tcgcgtcatc cgcaagaaac aacaaaagaa tgtctcaatc
     2101 cgtttggccg acagccgtgt gcgttatgga ttgccgttct ataaacccca ccacgcggta
     2161 accgatgcac tggccacagc cgaactgttg caagcgcaaa ttgcccaccg ctttagtcca
     2221 gacacaccac tcaatgaact gtggtgctaa atcacgcaac caagccacgc aaac
//
LOCUS       DATBNL010000496         2234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_45760, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000496 DATBNL010000000
VERSION     DATBNL010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45760"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1163)
                     /locus_tag="VIC30_08645"
     CDS             complement(<1..1163)
                     /locus_tag="VIC30_08645"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEY7804484.1"
                     /translation="MINEIHRILAEYWPHIVLTLSLVASVSTAIHAAMTKQDVRAAIG
                     WVAVVIFSPLLGATFYLFAGINRVRLQRVSEQRKLAEQERDRLQRMQISQMPPGFDEH
                     IKPLRRLGDRINGHVLLQGNDIKLLAGGDQTYAAMIEAIESAKHAVALQSYIFDHDGI
                     GLRVAQALIDAKVRGVNVRVLIDAVGAKYSHPPITRMLTEAGVSVGLFLPTAIGLRLV
                     YANMRSHRKLLVVDGSRALTGGMNIREAFMREFAGDSVAVDTHFSVTGPICDHLMDSF
                     AHDWEFTTGERLEGDTWFANFDAGQTTQGVPMRVVLSGPDRAVGRNQSMLLGALSVAR
                     HHVRIQSPYFLPEPVLLGALVTAARLGVRVDVVIPANNNLKLVSAAMEAQLEQ"
     gene            1184..1259
                     /locus_tag="VIC30_08650"
     tRNA            1184..1259
                     /locus_tag="VIC30_08650"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1217..1219,aa:His,seq:gtg)
     gene            complement(1271..1981)
                     /locus_tag="VIC30_08655"
     CDS             complement(1271..1981)
                     /locus_tag="VIC30_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY7804485.1"
                     /translation="MKSETRARLMHISTATLATLLFKRGLKNQFIQNVTRLSKANENM
                     VGQAFTLRYMPAREDRNGIEVFRDRQHPQRQAIEQCPPGAVMVIDSRKDARAASAGGI
                     LVSRLKARGVAGIVTDGGFRDSSEIALLGIGAYHQRPSAPTNLTLHEAIDINVPIGCG
                     DAPVFPGDVVVGDADGVIVIPAEIADEVAIEAADMTVFEDFVMISVKHGKSILGLYPP
                     TDPKTLEEFDAWKKEHGF"
BASE COUNT          525 a          655 c          556 g          498 t
ORIGIN      
        1 aattgttcaa gctgcgcctc catggccgcg ctcacgagct tgagattgtt gttagccgga
       61 atgaccacgt cgacacgcac gcccaagcgc gctgctgtca ccaaggctcc caacaaaacc
      121 ggctcaggca aaaagtacgg cgactgaata cgcacgtgat ggcgcgccac cgacaaggcg
      181 ccaagcagca tggactgatt gcgacccacc gccctatccg gcccggatag aaccactcgc
      241 attggtacgc cttgggttgt ctggccagca tcgaaattgg cgaaccacgt atcgccttca
      301 aggcgctcac ctgtagtgaa ctcccagtca tgggcgaagc tgtccatgag gtggtcacaa
      361 atcggaccag tcacgctgaa atgcgtatcc acggcaaccg aatcaccggc aaactcacgc
      421 atgaatgctt cgcggatatt cataccacca gtcagcgccc gagaaccatc gaccaccaat
      481 aacttgcggt gactgcgcat gttggcatag accaacctga ggccaattgc tgtgggtaaa
      541 aacaaaccca ccgacacccc ggcttcagtc aacatgcggg taatcggcgg gtgagaatat
      601 tttgcaccga ccgcatcaat aagcactcgg acgttcacgc ctcggacttt ggcgtcaatt
      661 agagcctgcg ctactctaag gccgataccg tcatgatcaa aaatgtagct ttgcaaagcc
      721 accgcgtgct tagcggactc gatcgcctca atcatggccg cataggtctg gtcaccaccg
      781 gcaagcagct taatgtcgtt gccttggagt aatacatgac cgttaattcg gtcaccgagt
      841 cgccgtaatg gcttgatgtg ttcatcaaag ccaggcggca tttgcgaaat ctgcatgcgc
      901 tgcaatcggt cacgctcttg ctcagcgagt ttgcgttgct cactgacacg ctgcaaacgt
      961 actcgattga tgccggcgaa taagtaaaaa gtcgcgccaa gcaacgggga aaaaatcacc
     1021 accgccaccc agccaatggc tgcgcgcaca tcctgcttgg tcatggcagc atggatggcc
     1081 gtcgagacgc tggctacaag cgacaacgtg agcacaatgt gcggccaata ctccgctaaa
     1141 attcggtgga tttcattgat catgttaata tctacgtcct ttggtggctg tagctcagtt
     1201 ggtagagtcc cggattgtga ttccggttgt cgcgggttcg agtcccgtca gccaccccaa
     1261 cactgcttga tcaaaagccg tgttcttttt tccaagcgtc gaactcttct aatgtttttg
     1321 ggtcggttgg cggatacaag ccaagaatcg atttaccgtg tttgacgcta atcatcacga
     1381 aatcctcaaa caccgtcatg tcagctgctt cgatggccac ttcatcggct atctcggccg
     1441 gaatcacaat gaccccgtca gcatcaccca cgaccacatc gcccggaaac accggcgcat
     1501 cgccgcaacc aataggcaca ttgatatcaa tcgcctcgtg cagcgttagg ttcgtcggtg
     1561 cgcttgggcg ttgatggtaa gcaccaatac ctagcaatgc aatctcactg gaatcacgaa
     1621 acccaccgtc ggtcacaatc ccggccacgc ctcgcgcttt gagccgactg accaatatcc
     1681 cgccggctga tgcggcacgg gcgtctttgc gactatcaat caccatgacg gcgcctggcg
     1741 ggcactgctc tatggcttga cgctgcggat gctgtcgatc gcgaaacacc tcgatgccat
     1801 tgcgatcctc gcgcgccggc atgtagcgca aggtgaacgc ctgtccgacc atgttctcat
     1861 tggccttaga caaacgcgtg acgttctgaa tgaactgatt tttaagtccg cgtttgaata
     1921 gcagcgtagc aagggtcgcc gtactgatgt gcatcagtcg tgcccgggtt tcagacttta
     1981 tttcaggctt tagtacgtga ctatcgtttg ttgcttgatc atcggtctga ctcatgaatc
     2041 tctccagtct tcatagcact gcacccttct aagcgagtgc gttaggcgca attagtaaat
     2101 atcaggctca cccaccggct tgccaaacgc tgttttaagg aaatcaaaat cacagccttc
     2161 gttggcctgc tcaatgtgct gcgagaacat ccaaccgtaa ccccgctcaa aacgtacttc
     2221 cggtggcgtc cagg
//
LOCUS       DATBNL010000497         5191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_85955, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000497 DATBNL010000000
VERSION     DATBNL010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85955"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..665)
                     /locus_tag="VIC30_08660"
     CDS             complement(60..665)
                     /locus_tag="VIC30_08660"
                     /inference="COORDINATES: protein motif:HMM:NF021453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 domain-containing protein"
                     /protein_id="HEY7804486.1"
                     /translation="MSLTSHHRLYQVSLLTKAGLVLSIGLFGLLVAWTNVTAYTINFQ
                     FVQHVLSMDALASWAQVDALTQRAITDPAMHQFAYAAIILAEFVVGLLCSVGGLLFLI
                     TVFSHSDRHLAIGKAFALAGCGIGLAVWYLGFAVIGAEYFAMWASDWNGQTTAYSFSA
                     ILLLSMIYVAQPEAGAAAPAPTPNPNPLHSDLTPDESDHDR"
     gene            870..1403
                     /locus_tag="VIC30_08665"
     CDS             870..1403
                     /locus_tag="VIC30_08665"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006482197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7804487.1"
                     /translation="MQDSMTIRSCEVIQDSESIQTILNHVIQTSTALYDYEPRPIEQV
                     TAWVAQKHSAGLPLRGAFDAQGALLGFATYGPFRPQPAYKYTVELSVYVAEHAQGQGV
                     ASALMQDLIDQAQNQDYHVMIGCIDATNTASIALHKKFGFHHCGTIEQAGFKFGRWLD
                     ATFYQKTLQSPHKPMDG"
     gene            1493..2200
                     /locus_tag="VIC30_08670"
     CDS             1493..2200
                     /locus_tag="VIC30_08670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019575527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY7804488.1"
                     /translation="MIPINIESAWRGTSDCRHCGIRDMVLFADLNESDFANIHAPIDD
                     LVFHTGDTLFLEGDAAEHVFTIRKGLVKVIRNTPDGRVRIVRILKPGDVAGLEGLFAN
                     AYESDVVATSEVSVCRIPISIIKNLSTTSPRLHMRLMERWHKAVKDADDWLADLNFGT
                     ARQRVANIILKMRHDDDPSLTSLFSREDMGAMSDLKLETVSREVSRWAKEGAIEPMDR
                     IGRLYRIVDLQKLQQAE"
     gene            2220..2819
                     /locus_tag="VIC30_08675"
     CDS             2220..2819
                     /locus_tag="VIC30_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804489.1"
                     /translation="MDKTWLSAIVTAISLIAFLPYLVSTIRGAIRPHVMSWTIWGITT
                     SIVFWAQRESGAGVGAWPVGFSAIIAFMVAILAYSKRSEIRIVRSDWGFFLTALAAIP
                     LWYLTDSALLAVLLVTTIDVLGFGPTLRKAYAQPQSESLLFFSMIVVRNILVILALEH
                     YSVTTALFPVAIGSMAAVVFTVVLTRRLHNKAKPTIDPR"
     gene            2828..3502
                     /gene="can"
                     /locus_tag="VIC30_08680"
     CDS             2828..3502
                     /gene="can"
                     /locus_tag="VIC30_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006578377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HEY7804490.1"
                     /translation="MLEPNASESLSELFARNRQWVAEVTESDRTFFTRLANQQSPEYL
                     WIGCSDSRVPANQITGLAPGEVFVHRNIANVVVHTDLNVLSVIQFAIEELKVKHIIVV
                     GHYGCSGVKAALQNKRLGLADNWIRHIRDVQQKHDHYLGHILGDDDRLDKLCELNVIE
                     QVIHVSQTSAVNEAWARGQSLTVHGWIYGLHDGLVRDLGMSVDSPDHLKQRYESVMQT
                     QYADSP"
     gene            3518..4366
                     /locus_tag="VIC30_08685"
     CDS             3518..4366
                     /locus_tag="VIC30_08685"
                     /inference="COORDINATES: protein motif:HMM:NF023984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3750 domain-containing protein"
                     /protein_id="HEY7804491.1"
                     /translation="MKRLARFLLAFVVLVALAGAIKWWQDGDRIAHAQTLGWYQLPRD
                     ATNVLPDPSATDDAIVAVLAAPTYGWRGYFAVHPWIVYKRAGDNAYTRYEVIGWSRTN
                     VVRRNHARADSQWYGATPRIFAFERGQDADSMIADIEQAIASYPYNNTYRSYPGPNSN
                     TFLAHIGREVPALDLDLPPTAIGKDYRPWSNPVGIAPSGSGVQASLKGLLGVIASPRE
                     GIELNLLGLGVGLDFNCPALRLPFVGRLGVDGTISSTGCNGDLLGTNQDEAREQGNDD
                     DSATLL"
     gene            4398..4898
                     /locus_tag="VIC30_08690"
     CDS             4398..4898
                     /locus_tag="VIC30_08690"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY7804492.1"
                     /translation="MMVLILLPIGFWMVDRGQADLWDGLTGGLYSAHKALGFILLWLV
                     IWRLVLRAMGTAPGYPDSVPVGVQKLAKATQWIMYALLLSIPLLGWAGVTAFGALNTI
                     GGLNLPAMPGIPADKVLAKDIFAVHGWLAVALCVLLVLHIAGALKHRLIDRDGVFDHM
                     SLAKRY"
     gene            complement(4909..>5191)
                     /locus_tag="VIC30_08695"
     CDS             complement(4909..>5191)
                     /locus_tag="VIC30_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004626582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY7804493.1"
                     /translation="FESLIDCQLSVDEIRHFKTTPQAYALVEQRLGAKPAQVLFVSSN
                     GWDVMAAGWFGFTTCWINRAGLPVETLGPQPAHIGRDLTAVLSAIGQAG"
BASE COUNT         1203 a         1422 c         1362 g         1204 t
ORIGIN      
        1 cagcctgctg cttgggcaag ctctcgaaca agttcccgct taatggctgg cccaccactt
       61 tatcggtcat ggtcggattc gtctggcgtt agatctgaat ggagcgggtt aggattcggg
      121 gtaggggcag gggcagctgc accggcctca ggctgggcca cataaatcat cgacaacagc
      181 aaaatcgcag aaaacgaata cgccgtggtc tgcccgttcc agtcgctcgc ccacattgcg
      241 aagtactccg caccaatgac tgcaaaaccc aggtaccaaa ctgccaagcc gattccgcaa
      301 ccggccaacg cgaacgcttt gccaatggcc agatgacggt cgctgtgact aaaaacagtt
      361 atcaaaaaca acaaaccacc gacactgcac aacagcccca ccacaaactc ggccaggata
      421 atggctgcat aggcgaactg gtgcatggcc gggtcagtga tcgccctttg cgttaacgca
      481 tcgacttggg cccaagaggc caaagcatcc atgctcagaa cgtgctgcac aaactgaaaa
      541 ttgatcgtgt aggccgtcac gttggtccag gcaaccagca agccaaacaa gccaatcgac
      601 agtaccaatc ccgccttggt taataagctg acctgataaa gacggtgatg tgaggttaac
      661 gacatgccag gctcccagca gtgggtgaat cggacgtgaa tcggacgtaa cgttagtcat
      721 aacgctagtg atagcatgaa aatgtgcgct tgcccaagcg tcagatacct cagatacagc
      781 aggtaccacc gtcaccgcgt gcaatcacct accgctacac ttatggcatt aaccgtcgaa
      841 taagacgcct atttccaatg agcatcacga tgcaagactc catgaccatc cgttcttgcg
      901 aagttatcca agacagcgaa tcgattcaga caattctgaa tcacgtgatt caaacatcca
      961 ctgcgttata tgactacgag ccgcgtccca tcgagcaagt caccgcctgg gtcgcacaaa
     1021 agcactcggc cggactccct ttgcgtggcg cctttgatgc acagggtgca ctcttggggt
     1081 ttgccacata cggcccgttt cgcccacaac ccgcctacaa atacacggtt gaactctcgg
     1141 tctacgtggc cgaacacgct caagggcaag gggtggcaag tgccttaatg caggacttga
     1201 tcgatcaggc acaaaaccag gattatcacg tcatgattgg ttgcatcgat gcaaccaata
     1261 cggcgagtat tgcgctgcat aaaaagtttg gctttcacca ctgcggcacg attgagcagg
     1321 ctggcttcaa gttcggtcgt tggcttgatg cgactttcta tcagaaaaca ctgcaaagtc
     1381 cacataagcc gatggatggc taatgacgct aatgctgttt ttagttggcg ttgccgtatg
     1441 atgggtagat gttttacgtt gatcactacg agtttgctgt aaagttagtc ccatgatccc
     1501 tatcaatatt gaatcagctt ggcgtggtac gtcggattgt cggcactgcg gcatccgtga
     1561 catggtgttg tttgccgacc tcaacgagtc agattttgcg aacatccatg cacccattga
     1621 tgatctggtg tttcacaccg gcgacaccct gtttcttgaa ggtgatgctg cagaacatgt
     1681 atttacgatc agaaaaggcc tagtcaaagt catacgcaac acgccagacg ggcgggtacg
     1741 aattgtgcgc attctcaagc ctggcgatgt cgctggcttg gaaggcttat ttgccaatgc
     1801 ctacgagtcc gacgtcgtgg ccacaagcga agtcagcgtt tgccggattc cgatctccat
     1861 catcaaaaat ctctccacca catccccgag gctacacatg cgcttgatgg agcggtggca
     1921 caaagccgtc aaagatgccg atgactggct agctgacctg aacttcggaa ccgcgcgtca
     1981 gcgcgtggcc aacatcatcc tgaagatgcg ccatgatgac gacccttctt tgacatcgtt
     2041 gttctctcgt gaagacatgg gtgccatgtc tgacctgaaa ctagagaccg tcagtcgcga
     2101 agtcagtcgc tgggccaaag aaggggccat cgaacccatg gatcgcatcg gacgtctgta
     2161 tcgcatcgtt gacctacaaa aactgcaaca ggctgaatag cccatgacag gtcaccttca
     2221 tggataaaac ttggttgtcg gccattgtca cggccatcag cctgatcgca tttttgcctt
     2281 atcttgtgtc gaccatacgc ggcgcgattc gaccgcacgt gatgtcttgg acgatctggg
     2341 gcatcaccac atcgattgtg ttctgggcgc aacgtgagtc gggtgccggt gtgggcgctt
     2401 ggccagtggg cttttctgcg attattgcct tcatggttgc gatcctggca tacagcaaac
     2461 gcagcgaaat ccgtatcgtg cgcagcgact ggggcttttt tctgacggca ttggcagcca
     2521 tacccttgtg gtatctgact gacagtgcac tcttggcagt tttattggtc acgaccatcg
     2581 atgtgctggg gtttgggccg acactgcgca aagcctacgc acagcctcag tcggagtcac
     2641 tgctgttttt ttccatgatt gtggtgcgca acatcttggt gattctggca ctcgagcatt
     2701 attctgtcac cacagctttg tttccggttg ccattggcag catggctgct gtcgtattca
     2761 ctgtcgtgct cacgcgccgt ctgcacaaca aagccaaacc aaccattgat cctcgctaga
     2821 acccatcatg ctagaaccca acgcatctga aagtctctct gagttatttg ctcgcaaccg
     2881 tcaatgggtt gccgaggtca ctgaaagtga taggacgttt tttacccgct tggccaatca
     2941 acaatcaccg gaatatttgt ggattggctg ttcggattcc cgtgtgcctg ctaaccaaat
     3001 cacggggctc gcgcccggcg aggtgtttgt tcaccgcaat atcgctaacg tggtcgtgca
     3061 taccgatctg aacgtgctct cggtgatcca gttcgcaatt gaagagctga aggtcaaaca
     3121 cattattgtc gtggggcatt acggctgctc aggtgttaaa gccgccctac agaacaagcg
     3181 gctgggtctg gctgacaact ggattcggca catacgcgac gtccaacaaa agcatgacca
     3241 ctacctgggt catattctcg gtgacgatga tcgcttggac aaactctgtg aactcaacgt
     3301 catcgaacaa gtcatacatg ttagccaaac cagtgccgtt aacgaggcct gggcacgtgg
     3361 tcagtctttg actgtacacg gctggattta tggcttacac gatggtctgg ttcgagactt
     3421 gggcatgagc gtcgacagtc cagaccactt aaaacaacgc tatgaaagtg tgatgcaaac
     3481 tcaatatgcc gacagcccct aaaccttggt gtcacgtatg aagcggctgg ctcgtttctt
     3541 attggccttt gtggtgctcg tggctttggc gggtgccatc aaatggtggc aagacggcga
     3601 ccggattgcc catgcacaga cactgggctg gtaccaactg ccgcgtgatg ccaccaatgt
     3661 cttgcctgac ccgagcgcaa ctgacgacgc cattgtggcg gtgctggccg cccccaccta
     3721 cggctggcgt ggctattttg ctgtgcatcc ctggattgtt tacaagcgcg ccggtgacaa
     3781 cgcctatacc cggtacgaag tcatcggctg gagtcgcacc aacgtggttc gacgcaacca
     3841 tgcgcgggct gatagccagt ggtatggcgc caccccgcgc atcttcgcat ttgaacgcgg
     3901 tcaagacgct gattcgatga ttgccgatat cgaacaagcg atcgccagct acccctacaa
     3961 caacacctat cgaagttacc cgggtccaaa tagcaatact tttttggcgc acattggtcg
     4021 cgaggtgcct gcgctcgatc ttgacttacc accaacggcc atcggtaaag actatcgacc
     4081 atggtccaat ccagtgggca tcgcgccatc tggcagtggc gtgcaagctt cactcaaagg
     4141 cttgcttggc gtgattgcca gtccccgtga aggcatcgaa ttgaatctgc tcggtttagg
     4201 tgttggtcta gactttaatt gccccgccct tcgcttaccc tttgtcggca ggctgggggt
     4261 agacggtact atttcaagta cgggttgcaa cggtgatttg ctgggcacca accaagacga
     4321 agcacgcgaa caggggaatg acgatgacag cgccacactt ctctagaaca caacgatggt
     4381 tgcactggat agtggccatg atggtgctga ttctattgcc catcgggttc tggatggtcg
     4441 accgaggtca agccgacctc tgggatgggt taaccggcgg cctgtactct gctcacaagg
     4501 ccttgggttt cattctcttg tggttagtca tttggcgctt ggtgttgcgc gccatgggca
     4561 ccgcaccggg ctatcccgac agcgtgcctg tcggtgtgca gaaactggcc aaagccacgc
     4621 aatggatcat gtatgcgcta ttactcagca ttcccttgct gggttgggca ggcgtgacgg
     4681 cattcggcgc actgaacacc attggtggct tgaacctgcc ggccatgccg ggcataccgg
     4741 ctgacaaagt gttggccaaa gacatttttg cggtgcacgg ctggctagct gtcgcactct
     4801 gtgtgctact ggtcttgcat atcgccggcg cactcaagca tcgattgatc gatcgcgacg
     4861 gcgtcttcga tcacatgtca ctagcaaaaa gatactaacc aagcaccact agcctgcttg
     4921 accgatggcg cttagcacgg ctgtcagatc acgaccaatg tgggctggtt gtggccctaa
     4981 ggtctctacc ggcaatcccg ctcgattaat ccagcaagtc gtaaaaccaa accaaccagc
     5041 agccatcaca tcccaaccgt tgcttgagac aaacaacact tgagcgggct tggcgcccaa
     5101 gcgttgctca accaacgcgt aggcttgcgg tgtggtctta aagtgcctga tctcatcgac
     5161 cgaaagctgg cagtcaatca acgactcaaa a
//
LOCUS       DATBNL010000498         3630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_165930, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000498 DATBNL010000000
VERSION     DATBNL010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165930"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="VIC30_08700"
     CDS             <1..253
                     /locus_tag="VIC30_08700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /protein_id="HEY7804494.1"
                     /translation="LAASGYAGINDLDVESVKLWLGDVLVASGGARHPDYLEADGQRI
                     MNESDILVRVSLGRGSVTETVYTSDFSHEYVSINADYRS"
     gene            262..1170
                     /locus_tag="VIC30_08705"
     CDS             262..1170
                     /locus_tag="VIC30_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018025569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804495.1"
                     /translation="MSESNPSQNTSNTSPADLSELIERANGVLKQLQAWLPPAPPPVD
                     WHAHAYRWRKRGTAHGWLDAIAHPHRITLEDLQHIERQKSIIERNTQHFVQGKPANHV
                     LMTGSRGTGKSSLVKAMLAQFADQGLRLIEVDKADLGDLADIVDCVATRPERFIVFCD
                     DLSFEEGESGYKALKSVLDGSAASTGENVLIYATSNRRHLMPEYMNENLQAKHQPDGE
                     VHPGETVEEKISLSERFGLWLSFYPFRQDDYLDIVAHWLRELGCSEDSITEARTEALQ
                     WTLERGSRSGRVAWHFARDWAARHAD"
     gene            1160..2113
                     /locus_tag="VIC30_08710"
     CDS             1160..2113
                     /locus_tag="VIC30_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nudix family hydrolase"
                     /protein_id="HEY7804496.1"
                     /translation="MPTEVVDVAVGVLISPDGKVLLGDRPAGKPWAGWWELPGGKLEP
                     GESVIHALARELQEELGIVLQHATPWVTYVHQYPTTTVRLFFCRVTDWHGQPQGLEQQ
                     QLKWVDIASALDLPDLLPATYPPLRWLQIPDRYLISPGQGQDSMPSFLARLQTALAQG
                     VRLVQWREPSWHGPDMRTALEAVLALCHTAGAKVLMNSAHDEALWTLADGVHFRAQDA
                     KQAHTRPASLANHLVGVSAHTEQELHMARSFGADFAVLGPVLPTDSHPGASTLGWDGF
                     EALQQEAGLPVFAIGGQTASMLGQAQSRGAHGIAGIRQIID"
     gene            complement(2066..3550)
                     /locus_tag="VIC30_08715"
     CDS             complement(2066..3550)
                     /locus_tag="VIC30_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006228014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY7804497.1"
                     /translation="MLSLVKQARGFMRFGVLAGMVVLAGCTVGPDYERPNIDMGESFG
                     QLQDNPGWMPAKPGMPGFNQQWWTIFNDQVLDGLMQTLNAQNLSIEQAQAQYDQALTN
                     VRSANASLYPTLGANAGATRSDAPMVLPGSSTVVGGSGAYTEYDASLGLSWELDLWGG
                     IRRSIESAQASAQASAADLAGAKLSAQAALASTYYQLRVLDVQADLLDSTIVSNARSL
                     ELTKNLQRAGLTDKGDVAVAQTQLDTVRAQRLDIEWRRAQLENAIAVLLGQSPASFEL
                     APKVDLTVEPPSIPVGVPSALLQRRPDIASAERRTAAANAQIGVATSAWFPDLTISAS
                     GGYRSRQFAQWFNAPAQFWALGPALAMTIFDGGRRQAQIEEAQAGFRAQAANYRLTAL
                     TALQEVEDALVQLRVLAQVQTVQRSAVAAARESLRIRRDQYEKGLVDYLSVAVLETTL
                     LNNQRNAIAVMGDRLAASVRLVAALGGGWSVDDLTNTSDAVSTP"
BASE COUNT          821 a         1086 c          973 g          750 t
ORIGIN      
        1 tttggcggcc agcggttacg ccggcatcaa tgatctagac gttgagtctg tgaaattgtg
       61 gctaggcgac gttcttgtgg ccagcggtgg tgcgcgtcat cccgactatc tcgaggctga
      121 cggtcaacgc atcatgaacg aatccgatat ccttgtgcga gtatcacttg gccgcggctc
      181 ggtcacagag acggtttaca ccagcgactt ctcacacgag tatgtcagca tcaacgccga
      241 ttaccgatcc taaagcaccc catgtcagaa tcaaacccct cacaaaacac ttcaaacaca
      301 agcccagccg atttgtcaga gctaatcgaa cgcgccaatg gtgtactcaa gcaattgcaa
      361 gcctggctgc cacctgcccc gccgcccgtg gactggcacg cgcacgccta ccgctggcgc
      421 aagcgcggca ccgcacacgg ttggttagat gccatcgcgc atccccaccg gattacgctt
      481 gaagacttgc aacacatcga acgccaaaaa tcgatcatcg aacgcaacac gcaacacttc
      541 gtacaaggca agccagccaa tcacgtgctc atgactggct cgcgtggaac cggtaaaagc
      601 tcactggtca aagccatgct ggcgcagttt gccgatcaag gcttgcgttt gattgaagtc
      661 gacaaagccg acttgggtga cttggctgac atcgtggact gtgtggccac tcgacctgag
      721 cgattcattg tgttttgtga tgacttgtcc tttgaagagg gcgagtctgg ctataaagcc
      781 ttgaagtccg tgctcgatgg ctcggccgcc tcaaccggtg agaacgtgtt gatttacgca
      841 acatcgaacc gacgccatct catgcctgag tacatgaacg agaatctgca ggccaaacat
      901 caacccgatg gtgaagttca tccgggtgag accgtcgaag agaagatctc gctctccgag
      961 cgtttcgggt tgtggctatc gttctaccca tttcgtcaag acgattacct cgatatcgtg
     1021 gcgcactggc tacgtgaact gggctgcagt gaagactcga ttaccgaggc tcgcaccgag
     1081 gccttgcaat ggacgctcga acgcggttca cgttcaggtc gggtagcgtg gcactttgcc
     1141 agggattggg cggcgcgcca tgccgactga ggttgtcgat gtcgccgtag gtgtgttgat
     1201 ctcacccgac ggcaaagtat tgcttggtga tcgaccagcc gggaaaccat gggctggttg
     1261 gtgggagttg ccaggtggca agctcgagcc tggtgagtcc gtcatacatg ccttggcgcg
     1321 tgaactacaa gaagaacttg gcattgtgct ccaacacgcc acaccctggg tcacctacgt
     1381 acatcagtac cccactacca ccgttagact gtttttttgt cgggtcactg actggcacgg
     1441 acaaccgcaa ggcctagagc agcagcaact gaaatgggtg gatatcgcaa gcgcccttga
     1501 tttgcccgat ctgttgccag caacataccc gccactgcgt tggctgcaaa tacctgatcg
     1561 ctacctgatt tccccaggcc aaggccaaga cagcatgccg tcttttttag cgcggcttca
     1621 aactgcgtta gcgcagggcg tgcgactggt gcaatggcgc gagcccagct ggcatgggcc
     1681 agacatgcga acagcacttg aagctgtgct agcactttgt cacacagcgg gtgccaaggt
     1741 gttgatgaat agcgctcacg atgaagcgct ttggacgctg gccgatgggg ttcatttccg
     1801 cgcgcaagac gcaaaacaag cccacacacg cccagcatcc ttggccaatc acctagtggg
     1861 tgtatccgcg cataccgaac aagagcttca catggcgcgc tcatttggcg cagactttgc
     1921 ggtgttgggg ccagtattac cgacagactc ccatccgggt gcaagcacac tgggctggga
     1981 tgggtttgaa gcactacaac aagaagcagg tttgcccgta tttgccattg gcgggcagac
     2041 cgcctctatg cttggccaag cccaatcacg gggtgctcac ggcatcgctg gtattcgtca
     2101 gatcatcgac tgaccaacca ccccctaaag ccgccacaag tcgcacactg gccgctaatc
     2161 gatcgcccat cacagcaatg gcattgcgct ggttatttag cagcgttgtc tcgagcacgg
     2221 caacgcttag ataatccacc agacctttct catactggtc ccggcgtatg cgaagtgact
     2281 cgcgtgccgc cgcaacagct gagcgctgca cggtctgcac ttgcgccaag actcgcaact
     2341 gaaccaaggc gtcttcaact tcttgcaatg ctgtcagcgc ggtcagccgg taattggctg
     2401 cctgagcacg gaaacccgct tgcgcctctt caatctgcgc ctgcctgcgt ccaccatcaa
     2461 aaatcgtcat cgccaatgca gggccaagcg cccagaattg ggcgggtgca ttaaaccact
     2521 gagcaaactg gcgtgaacga tacccaccac tggccgagat cgtcagatct ggaaaccagg
     2581 ccgacgtcgc cacaccgatc tgcgcgttgg cagcggccgt gcgtcgctcg gccgacgcaa
     2641 tgtcaggacg acgttgcaac aaggccgatg gcactccaac cggaatggat ggtggctcga
     2701 cggtcagatc aaccttgggc gccaactcaa aactagccgg cgactggccc aacaacaccg
     2761 caatggcgtt ttctagttgc gcgcgacgcc attcgatatc caatcgctga gcgcgcaccg
     2821 tatctaattg ggtctgagcc accgccacat cgcccttgtc ggtgagcccc gcgcgctgta
     2881 aattcttagt tagctcaagc gaccgcgcat tcgaaacaat ggtgctgtcg agcaaatccg
     2941 cctgcacatc aagcacacgc aactggtagt acgtactggc aagcgccgct tgggcactaa
     3001 gtttggcacc agccaagtca gccgcactgg cttgggcaga ggcttgtgcc gactcaatac
     3061 tgcgtcggat acccccccaa agatcaagct cccaactcaa ccctagactg gcatcgtatt
     3121 ccgtgtaagc cccagatccg ccaaccacag tcgatgagcc aggaagcacc atgggcgcat
     3181 ccgagcgagt cgcaccagcg ttggcaccta gtgttggata taaggatgcg ttggcactac
     3241 gcacgttggt cagtgcttga tcgtactgcg cctgcgcttg ttcaatactc aggttctgtg
     3301 cattgagcgt ttgcatcaat ccatcaagca cttggtcatt aaatatggtc caccactgct
     3361 ggttaaaccc tggcattcct ggcttggccg gcatccagcc agggttgtct tgcagttgcc
     3421 cgaagctctc acccatgtcg atgttggggc gctcatagtc ggggcctacc gtacaaccag
     3481 ccagcaccac catacccgcc agcacgccaa accgcatgaa cccacgtgcc tgcttcacaa
     3541 gactcaacat ccgacactac ctgaagaagt taaagcgcgc acaatgcgta tctaaacggg
     3601 atatcacgct gcacgggctg tggcttggac
//
LOCUS       DATBNL010000499         2536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_165934, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000499 DATBNL010000000
VERSION     DATBNL010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165934"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..956)
                     /gene="rfbA"
                     /locus_tag="VIC30_08720"
     CDS             complement(72..956)
                     /gene="rfbA"
                     /locus_tag="VIC30_08720"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011464959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEY7804498.1"
                     /translation="MQSKRRGIILAGGSGTRLYPITQGVSKQLLPIYDKPMVYYPLTT
                     LMLAGIRNVLVISTPQDTPRFETLLGDGSQWGMNIEFAVQPSPDGLAQAFIIGREFVG
                     NRPSALVLGDNIFYGHDLVRLLQSADELESGATVFAYHVHDPERYGVVEFNDQRQAMS
                     IEEKPTQPKSNFAVTGLYFYDEQVCDIAASIAPSARGELEITDVNKRYLEQAQLKVEM
                     MGRGYAWLDTGTHDSLLEAAGFISTLQKRQGLMVACPEEVALIQGWINNEQIEKLAAP
                     LQKNHYGQYLLSLITQRG"
     gene            complement(970..2025)
                     /gene="rfbB"
                     /locus_tag="VIC30_08725"
     CDS             complement(970..2025)
                     /gene="rfbB"
                     /locus_tag="VIC30_08725"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013124071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEY7804499.1"
                     /translation="MIIVTGGAGFIGSNFIHTWLAQTDEPVINLDKLTYAGNPENLVK
                     FQKDSRYTFVHGDIGDRTQVDALLASHQPRAIVNFAAESHVDRSIHGPGEFITTNING
                     TFHLLESVRGFWDTLSPEAQKSFRFLHVSTDEVYGTLAPTDPAFSETNPHRPNSPYAA
                     SKAASDHLVRAWHHTYGLPVLTTNCSNNYGPFHFPEKLIPLVILNALAGKPLPIYGDG
                     QQVRDWLYVRDHAIAIMQVLARGRLGETYNIGGNQEKTNLSVVQTICDHLDTLKPKSD
                     GTSYQAQITFVTDRPGHDRRYAIDASKIERELGWAPQETFESGLEKTIQWYLDNQQWV
                     EHVTSGDYRQWVEKQYG"
     gene            2284..>2536
                     /locus_tag="VIC30_08730"
     CDS             2284..>2536
                     /locus_tag="VIC30_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013393262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7804500.1"
                     /translation="MNKPVAAFESFGKPDNLADEIAAQLRDRILKETLSPGQRLPTEQ
                     ALGAQFGVSRNVVREAIARLKLTGLVETRHGVGTFVKHDL"
BASE COUNT          591 a          617 c          679 g          649 t
ORIGIN      
        1 accaaatacc ttaggggtaa gcagtaacac gtcactgatc gtcgttggtt gtacctggta
       61 gggcatgtcg cttagcctcg ttgcgtaatc agtgacagga gatattgacc gtaatggttc
      121 ttttgcaggg gagcggcgag cttttcgatt tgttcgttgt tgatccaccc ttgaatcaaa
      181 gccacttctt ctgggcaggc gaccattaaa ccctgacgtt tttgtagagt actgataaag
      241 cccgcggctt cgagcaaact gtcatgtgta ccggtgtcga gccatgcata gccccggccc
      301 atcatctcga ctttgagctg cgcctgctcc agatatcgtt tgttgacgtc ggtgatttct
      361 agttcgccgc gagccgaagg tgcaatcgag gccgcaatgt cgcacacctg ctcgtcataa
      421 aagtacagcc cagtcactgc gaaattactc ttgggctgtg tgggtttttc ttcgatgctc
      481 atcgcttggc gttgatcatt gaactccacc acgccatatc gttcggggtc atggacgtga
      541 taagcaaaca ccgtggcgcc agactcaagt tcgtcggcac tttgcagcaa acgcacgaga
      601 tcgtgaccat agaaaatatt gtcaccaagc accaaggcac ttgggcggtt gcccacaaac
      661 tcacgcccaa tgatgaaggc ttgcgccaaa ccgtctggtg agggctgcac ggcaaactcg
      721 atgttcatgc cccattggct accatcacca agcaaggttt caaaccgtgg ggtgtcttgc
      781 ggcgtggaaa tcaccaacac attgcgaatg ccagctagca tcaatgtggt cagcgggtaa
      841 tacaccatgg gtttgtcgta gatcgggagc aactgtttcg acacgccctg tgtgattggg
      901 tagagtcgtg tgccggaacc accggctagg atgatgccac gtcgtttgct ctgcattgtt
      961 gtcatctggt tatccatact gtttttctac ccactgacga tagtcaccgc tagtgacgtg
     1021 ttctacccat tgttgattat caagatacca ctggatggtt ttttctaggc ccgactcaaa
     1081 cgtctcttgt ggtgcccatc caagttcgcg ttcgatcttg gatgcgtcga tggcatagcg
     1141 cctgtcgtgg ccagggcgat cggtgacaaa cgtgatttgc gcttggtagc ttgtgccatc
     1201 ggattttggt ttaagcgtat caaggtggtc acagatggtt tgcactacgg acagattggt
     1261 tttttcctgg ttgccaccaa tgttgtaggt ctcaccgagc cgcccacgcg ccagaacctg
     1321 catgatggct atagcgtgat cgcgcacgta tagccagtca cgcacctgct ggccatcgcc
     1381 gtaaatgggt aacggcttac ccgccaaggc gttaaggatc accagtggaa tgagtttttc
     1441 tgggaaatga aagggaccgt agttattgct gcagttagtc gtgagcacag gtaagccgta
     1501 ggtgtgatgc caagcgcgaa ccaagtgatc agaagcagct ttgcttgcag cgtaagggct
     1561 attggggcgg tggggattgg tttcactaaa tgcagggtct gttggcgcta atgtgccata
     1621 gacttcgtca gttgaaacat gcaaaaaccg gaagcttttt tgagcctcag gtgacaatgt
     1681 atcccagaag ccacgaactg attccagcag atggaatgtc ccgttgatgt tcgtggtaat
     1741 gaattctccc ggcccatgga tcgatcgatc aacatgcgat tcagcggcaa aattgacaat
     1801 ggcgcgcggt tgatgacttg ctagtaacgc atcaacttgg gtgcgatcgc caatgtcgcc
     1861 gtgtacaaat gtatatcggc tatctttttg aaacttaaca agattctctg gattgcccgc
     1921 gtacgttaac ttgtccagat tgatgactgg ctcgtcggtt tgcgccagcc acgtatgaat
     1981 gaaattgctg ccaataaaac cagcaccacc agtgacaata atcatgagaa ttccataaat
     2041 tgcacatcag ttttcgcttg catcaggcta agtaaaagtg agttattgga caaccctact
     2101 agatttctga tcaaagctgt atatgattgt ttatagaagc gttgtaacgc tcgtgtaagt
     2161 aaataccttt caattggggg attgtagtat gagtcgcatc gtgctgaccc cgctttctgc
     2221 agggggcaaa ccatgaacgg aattggacgt acggtacata gccgggaaaa ccgccggcag
     2281 gccatgaaca agccagtggc cgcatttgag agttttggca agccagataa cctcgctgat
     2341 gagatcgctg cgcagttgcg cgatcggatt ctgaaggaaa ccctaagtcc cggtcagcgt
     2401 ctgccaaccg agcaggcgct aggtgcgcag ttcggcgtta gtcgcaacgt ggtgcgtgaa
     2461 gcgatcgcgc gtctaaagct caccggtttg gtcgaaaccc gtcacggtgt gggcactttc
     2521 gtcaaacatg acctta
//
LOCUS       DATBNL010000500         2212 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_184100, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000500 DATBNL010000000
VERSION     DATBNL010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184100"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..1210)
                     /locus_tag="VIC30_08735"
     CDS             complement(11..1210)
                     /locus_tag="VIC30_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY7804501.1"
                     /translation="MSHLKGHHRDTDLLHIGSAAFDPATECAPVNIPSIRTSTVRFKS
                     LQALDEVLAKRASGQPAITYGIAGLDTHRALEEVFMTLENGSYCVLSASGLASIHLVF
                     MATLKSGDHVLISDNVYGPVRNLNETLLKKLNIEATFFSAAHDDLPSLIRPNTRMLYL
                     ESPGSLLMEMLDLPSLAAQAKSHGLVVAVDNTWGTYLYEPLTLGADISIIAGTKYVSG
                     HSDLLLGAVVARDDAIAKQIHQMQYALGNSVSADDVWLALRGVKTLSIRLREHAHHAK
                     TVSQYLANHPKVSRIYDPAWPQDPGHEIWQRDCRGANGLISVSLNCTPEQARDFVDGL
                     TLFGIGFSWGGFESLVQWVNPNVLENHRYWTEHGKAVVRLHIGLEQPEDLIADLDQAL
                     SVLPDPA"
     gene            complement(1207..>2212)
                     /locus_tag="VIC30_08740"
     CDS             complement(1207..>2212)
                     /locus_tag="VIC30_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003800544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY7804502.1"
                     /translation="PGHSIEVAKGVHWIRMPLPFALDHINLWLLKDTIDGQAGWTIID
                     CGISRDEVKTLWETIFTNELGGLPVLRVIVTHMHPDHVGLAYWLCQRWQVPVWMSMTD
                     YMTARLWSSGDHNSAAGGEGAWRHFHAHGLRDADALEQIKGRSNYYKGLVPEAPKQFV
                     CLLDGDEVQIGGDTWHTIVGYGHAPEHLSFFNANKNVLISGDMVLPRISTNVSVQNLE
                     PLANPLPLYLQSLKRYSDLPADTLVLPSHGKPFTGLHERIEQQQVHHDERLAEVLAAC
                     ETPQSAHDILPVLFKRQLDLHQMTFAMGEAIAHLHALYFAGKLKRLVAGDGLIQFVRT
                     "
BASE COUNT          528 a          571 c          585 g          528 t
ORIGIN      
        1 caggccgctc tcaagctgga tcgggcaata cacttaaagc ctgatccaga tctgcaatga
       61 gatcctcggg ttgttctaat ccaatgtgca gtctcaccac tgccttgcca tgctcggtcc
      121 aataacggtg gttttctagt acgtttggat tcacccattg caccaggctc tcaaaacctc
      181 cccatgaaaa cccaatgcca aataacgtga gaccgtcaac aaagtctctc gcctgttctg
      241 gcgtgcagtt caaagacacg ctgattaagc cattggcgcc gcggcagtca cgctgccata
      301 tctcgtgacc cgggtcttgt ggccaagctg ggtcgtatat gcggctgact ttgggatggt
      361 tggctaaata ttggctcact gttttggcat ggtgcgcatg ctcgcgcaac cgtatagaca
      421 gggttttaac accgcgaagc gctagccaaa catcatctgc actgacgctg ttacccaagg
      481 catattgcat ttgatgaatt tgtttggcaa tggcgtcatc gcgcgcgacg accgcgccaa
      541 gcaatagatc agagtgacca ctcacgtatt tggtgccagc aataatagaa atatccgcac
      601 ctagcgttag cggctcatac aggtaggtgc cccaagtgtt gtcgaccgct acaacaaggc
      661 cgtgtgactt ggcctgtgcc gcaagtgagg gcaagtcaag catctccatt aacagcgagc
      721 caggcgactc gagatagagc atgcgcgtat tgggtcgaat caagcttggc aaatcatcat
      781 gggcggcaga gaagaacgtc gcctcaatgt tgagcttttt gagtaaggtt tcgttgaggt
      841 tgcgtaccgg tccataaaca ttgtctgaga tcaaaacatg gtcaccgctt ttaagggtcg
      901 ccatgaatac caaatgtata gaggccagac ccgaggcact gagcacgcag taggagccgt
      961 tctctagcgt catgaacact tcttcaaggg ctcgatgtgt gtctaaacca gcaatcccgt
     1021 aagtgatggc cggctgaccg ctggctcgct tggcaagcac ctcatccaaa gcttgcaagc
     1081 ttttgaatcg gaccgtgctg gtacgaattg atgggatatt gacaggggca cactcggttg
     1141 ccggatcaaa cgctgcactg ccgatgtgca gtaaatcagt atctcggtgg tgacctttga
     1201 ggtgactcat gtgcgtacaa attggattaa accgtcgcct gcgactagac gttttagctt
     1261 acctgcaaaa tacaacgcgt gcaggtgggc gattgcctca cccatggcaa atgtcatttg
     1321 atgcaggtcg agttgacgct taaaaagcac cggcaaaatg tcgtgggccg actgtggcgt
     1381 ttcacaggct gccagtactt cagcgagccg ctcatcgtga tgcacttgtt gttgctcaat
     1441 gcgttcgtgc agtccggtga agggtttgcc gtgcgacggc agcaccaagg tgtctgctgg
     1501 cagatccgaa tagcgcttga gcgattgcag gtacagcggc aacgggttgg ccaaaggctc
     1561 aaggttttgg acgctgacat ttgttgagat acgaggcagc accatgtctc ctgatatcag
     1621 cacgttttta ttggcgttaa aaaaagacaa gtgttcaggt gcatggccgt agccaacaat
     1681 ggtgtgccat gtgtcaccgc cgatttgtac ctcatcacca tcaagcaagc agacaaactg
     1741 tttgggcgct tcaggcacca gtcccttgta atagttcgat cggcccttga tctgttcgag
     1801 ggcgtccgca tcgcgcagcc cgtgggcatg gaaatgacgc caagcccctt cgccaccggc
     1861 tgcactgttg tgatctccac tagaccacaa ccttgcagtc atgtagtcgg tcatgctcat
     1921 ccaaacagga acttgccaac gctgacacag ccaatatgcg agtccaacat gatcgggatg
     1981 catgtgcgtc acgattactc gcaagacggg cagaccgccg agttcattgg taaaaatagt
     2041 ttcccaaagc gttttgactt catcgcgact aatgccgcag tcgatgatgg tccagcctgc
     2101 ttgaccgtca atggtgtcct taagtagcca gagattgata tgatcgaggg caaagggtaa
     2161 tggcattctt atccaatgaa cgcccttggc tacttcgata ctgtgtcccg gc
//
LOCUS       DATBNL010000501         1705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_184123, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000501 DATBNL010000000
VERSION     DATBNL010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184123"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /gene="argB"
                     /locus_tag="VIC30_08745"
     CDS             <1..317
                     /gene="argB"
                     /locus_tag="VIC30_08745"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEY7804503.1"
                     /translation="NINADGVAGKVAEVLSAEKLLMMTNTPGVLDKDGNLLRELSSRT
                     IDDMFADGTISGGMLPKIGSALDAARNGVKSVHVVDGRVPHCLLLEVLTDQGVGTMIS
                     SR"
     gene            317..1075
                     /locus_tag="VIC30_08750"
     CDS             317..1075
                     /locus_tag="VIC30_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEY7804504.1"
                     /translation="MTTQAPRRLPVPMVRAKRARIHTAAVRNPQKIWLFDLDNTLHDT
                     SFRIFPYISDGMTRAVMSCLGVEEPEAQHLRAKYWRRYGATMIGMVKHHGVNAQEFLL
                     RSHDFDVRPLVRAETGLHHKLGQLPGRKVLVTNAPLHYARAVLKHLGILQHFHSLWSI
                     EHLKLHGQYKPKPSVAILKHILACEGVAPHRAVLVEDTLSNLRGARAAGLKTVHVFHP
                     STPFAHQRRGRPHYVDLRVNKVSDLLLQKRLVRS"
     gene            complement(1130..>1705)
                     /locus_tag="VIC30_08755"
     CDS             complement(1130..>1705)
                     /locus_tag="VIC30_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEY7804505.1"
                     /translation="DDTVELSNLQRQIMHGTEQLGQLKVDSAEVAMARINPQTHVVGL
                     PHRLSGQALIDQVSAVDVVVDCCDNFQTRHAINQACVQTGTPLVSGAAIRFEGQICVY
                     DTREPDSPCYHCLFPEADDVTPVNCATMGVFAPLVGIVGSLQAAEAIKVLAAVGKPLQ
                     GRLVMFDARQTTWHEVRVPRDPNCPVCAQRP"
BASE COUNT          387 a          507 c          449 g          362 t
ORIGIN      
        1 acaacatcaa tgcagacggc gtggccggca aagtagccga ggtgctgagc gccgagaagc
       61 tcttgatgat gaccaacacg cctggcgtgc ttgataagga cggtaatttg ttgcgcgaac
      121 tgtcttcacg caccattgat gacatgtttg ccgatggcac gatctcgggt ggcatgctcc
      181 caaaaattgg ttcagcgctc gatgcagcgc gcaacggcgt gaagtctgtg catgtggttg
      241 acggccgcgt gccgcattgc cttttattag aagtattaac ggatcagggt gttggcacca
      301 tgatttcttc acgttaatga caacgcaggc accgcgtcgt ttacccgtac ccatggtgcg
      361 cgccaagcgc gcacgcattc ataccgcggc ggttcgcaac ccacaaaaaa tttggttgtt
      421 tgatctcgac aacaccttgc acgacacgtc gttccggata tttccgtata tcagtgacgg
      481 catgactcgc gcagtcatga gctgccttgg agtcgaggaa cccgaagccc aacatttgcg
      541 tgccaagtac tggcgccgct acggtgcaac catgatcggg atggtcaaac accacggtgt
      601 gaacgcacag gagtttctgt tacgcagtca cgattttgat gttcggccgc tggtgcgtgc
      661 cgaaaccggg ctgcatcaca agcttgggca gctacctggg cgtaaagtgc tggtcaccaa
      721 tgccccgcta cactatgcgc gcgccgtact gaagcatctg ggcatcttgc aacatttcca
      781 tagcctgtgg tctatcgagc acctcaaact acacgggcag tacaagccca aaccgtcagt
      841 tgccattctc aaacacatac tggcttgtga aggcgttgcc ccgcatcgag ccgtactcgt
      901 ggaagacacc ttatcgaatc tgcgtggcgc ccgtgcggcc gggcttaaaa ccgtccacgt
      961 gtttcacccg tcaacaccat ttgcgcacca acgacgtggc agaccgcact atgtcgacct
     1021 gcgggtcaac aaagtcagtg acttgctttt acaaaagcgg ctggtgcgca gctaggcagt
     1081 ctgtagttgc ctagttcact gtctcagcga ctcaacaacc ccaccctgat caaggacgct
     1141 gcgcgcacac cgggcaattc gggtcacgtg gcacccgcac ctcatgccag gttgtctgac
     1201 gcgcatcaaa catcaccaga cgcccctgca agggctttcc aactgcagcc agcaccttga
     1261 tagcttctgc tgcctgcaag ctgcctacga tgcccacaag cggcgcaaac acccccatcg
     1321 tggcacagtt aaccggcgtg acgtcatcag cctctggaaa caggcagtga taacagggac
     1381 tgtcaggctc gcgggtgtcg tagacacaaa tctgaccctc gaaccgaatc gcagcgcccg
     1441 agaccaaagg cgtgcccgtt tgcacacaag cctggttaat ggcgtgacgc gtctggaagt
     1501 tgtcacaaca gtccacaacc acatccactg cgctgacttg atcgattaaa gcttggccag
     1561 acaaacgatg cggcaatcca accacatgag tttgcggatt gatgcgcgcc atggccactt
     1621 cggccgaatc caccttcaat tgcccgagtt gctcagtgcc atgcatgatc tggcgttgta
     1681 ggttgctcaa ttcgaccgtg tcgtc
//
LOCUS       DATBNL010000502         1607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_184128, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000502 DATBNL010000000
VERSION     DATBNL010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184128"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1276)
                     /locus_tag="VIC30_08760"
     CDS             complement(<1..1276)
                     /locus_tag="VIC30_08760"
                     /inference="COORDINATES: protein motif:HMM:NF023330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3422 domain-containing protein"
                     /protein_id="HEY7804506.1"
                     /translation="MNAHYARHIVHSSKIGFTCRMTNFLPPEFDQRRLLHDEVHARPV
                     GQAPHPVVVFCLAVVNRDVTRDQELEHLGKLNSGADIEQIAGNFARMRLANGEIKWER
                     HTEFTRYTIVLPMGSDQTPSVSSPIVWLAHVRESQAPFAPWLAGVPGQTLAAVEVTVL
                     VTVDDVLEQGLSFGRDWFGEPTLLTSRLGTQGHSLVLTDFQVQADGVERMLVLTPAHT
                     SPARVGRTAHRLIEMEIYRLMALQGLPVAKALGAQLSAAENALAAIAREVESGTSQDH
                     EMLHDLASLAATIERANADHNYRFSATAAYHDIVLQRIKELRETPVSGIQTVGEFIER
                     RLGPAMATVDATAKRLESLSERVSRVSDLLRTRVNIMTEQQNQQLLEKLTRGQALQLK
                     LQQTVEGLSIAAISYYVVSLVYYLAKAGKSAGV"
     gene            1372..>1607
                     /locus_tag="VIC30_08765"
     CDS             1372..>1607
                     /locus_tag="VIC30_08765"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HEY7804507.1"
                     /translation="MQNDNTPKLTPLQKQIFGEAVKHSGKLIAIGVLLIVCGTLGLIA
                     ETAFSYASISILGAVALVGGVFMGIHAFQSKGWKT"
BASE COUNT          373 a          471 c          401 g          362 t
ORIGIN      
        1 atacaccggc agacttacct gctttggcta ggtaatacac cagactcacc acgtagtatg
       61 agatggctgc aatcgacaga ccttcgacgg tttgctgcag tttcagttgc aacgcttggc
      121 cacgggtgag cttttctaga agctgctggt tttgttgttc ggtcatgatg ttcacgcgcg
      181 tgcgcaataa gtcactgacc cgactgaccc gttccgacaa cgactctagg cgtttggctg
      241 tggcatcaac cgtggccatg gcaggcccca gacgcctttc aataaactcg cccacggtct
      301 gaatacccga gactggtgtt tcacgcagct ctttgattcg ctgcaacaca atgtcgtgat
      361 acgcagccgt cgcagaaaac cgatagttat gatccgcgtt agcacgctca atggttgccg
      421 ccagtgatgc caagtcatgc aacatctcat ggtcttgact ggtaccactc tctacttccc
      481 gggcaatggc cgcgagcgca ttctctgcag cagataattg cgcaccgagc gctttggcca
      541 ctggcagacc ttgcagggcc atcaggcgat aaatctccat ttcaatcaaa cgatgggctg
      601 tgcgccccac acgcgcaggc gatgtatgcg ccggcgtcag aaccagcatt cgttcaacgc
      661 cgtctgcttg aacctggaaa tccgttaaca ccagagaatg gccttgcgta ccaagcctag
      721 acgtcagcaa cgtaggctca ccaaaccagt cacgtccgaa cgacaagccc tgctccaaca
      781 catcatccac cgtcaccagc acggtgacct ctactgcggc cagggtctga cctggcacgc
      841 cggctagcca tggcgcaaag ggtgcctgag actcgcgtac gtgcgccaac cagacaattg
      901 gactactaac cgatggcgtc tgatcggacc ccatgggtaa cacgatggtg taacgggtga
      961 actcagtatg acgctcccat ttgatttctc cattggcgag acgcatacga gcaaaattgc
     1021 ccgcgatctg ctcgatgtca gcaccagaat tgagcttacc tagatgttct agctcttgat
     1081 cgcgggtgac atcacgattg accacggcca aacagaacac cacgacaggg tgtggggcct
     1141 gaccgactgg gcgtgcatgc acctcgtcat gcaacagccg tctttgatca aactcgggcg
     1201 gtaaaaaatt cgtcatgcgg caagtaaacc cgatttttga tgaatgcaca atgtgtcgtg
     1261 cgtagtgggc gttcatacta gccctccgaa accaccctgc caccctgcgc acgcttatca
     1321 cgccgcacat tggtatgatc tgtcctattc atcttgacaa ccgagactcg catgcaaaac
     1381 gacaataccc ccaaacttac cccactacaa aaacagatat ttggcgaggc cgtcaaacac
     1441 tctggcaaat tgattgccat cggtgtgctc ttgatcgttt gcggcacact tgggctgatt
     1501 gctgaaaccg cgttttctta tgcgtctatt agcattctgg gcgccgtggc actcgtcggc
     1561 ggtgtgttca tgggcattca cgcctttcag tccaagggct ggaagac
//
LOCUS       DATBNL010000503         2447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_95746, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000503 DATBNL010000000
VERSION     DATBNL010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95746"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VIC30_08770"
     CDS             <1..314
                     /locus_tag="VIC30_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013803612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY7804508.1"
                     /translation="WVDYPDRERELAIIAQQVPGITAKLSEQVATFVARLRDRPFADA
                     FSRSPGIAESVEWAKALVALETLQLDPEVVENTAGVLFKQRDDVAALEPLMQELLAAE
                     P"
     gene            324..1502
                     /locus_tag="VIC30_08775"
     CDS             324..1502
                     /locus_tag="VIC30_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013540208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY7804509.1"
                     /translation="MVLGDARTGKLADNLTGFGRMLRRAGLPVDSARISLAQQALDMV
                     DIGHKADVEAALRAVLVSRQEDQQVFADLFEAYFRNPEIAKQLMAQLLPQAKAESHPP
                     ARSARAQEALQAPKPQTQQAREEEKIELDAAMSASDRARLRHADFNQLSASEFKLIER
                     LVREIPLQLPTVPARRRRFASHGDSLHWQRLMRFAARHDGDFLELPMSKRRAVQLPLL
                     ALIDVSGSMERYARLMLAFLHQATRHHDRAIFAFGTQLTDLSDAFALRDTDQMLNQAN
                     AQIADFGGGTQLGGALQEMREQHRNLMVGNRTLVLLITDGLDTGSHDRLAHELDWLTR
                     QARATVWLNPLLRYDSYQPLAGGAQVLDRYVDEMLAIHNLEHLSMLAAAMAELMKKIR
                     "
     gene            1535..2167
                     /locus_tag="VIC30_08780"
     CDS             1535..2167
                     /locus_tag="VIC30_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019578108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEY7804510.1"
                     /translation="MQMQGSRQLTATAQQAWDALNDPEILKQCIPGCQKFELESENVY
                     KTAAAIKIGPVSAKFNGKVELSDIQPPKSYSLKFEAQGGVAGHGKGVSHVELEENADG
                     VELRYTVESQVGGKLAQLGQRLIDGAAKSMADDFFKRFEKALAEQTGSTNDTQTAESA
                     SEDAATSVAAEAGTSTPATAPRAASGGGVPRWIWIAVAAAVAAVVVFSQS"
     gene            2222..>2447
                     /locus_tag="VIC30_08785"
     CDS             2222..>2447
                     /locus_tag="VIC30_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007853476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEY7804511.1"
                     /translation="MQNQDLIVLKRLSQWRDAGQRAVLVTVMRTWGSSPRPVGSIMSM
                     CETGAVVGSVSGGCIEDDLIREFTQPAQDQG"
BASE COUNT          565 a          680 c          709 g          493 t
ORIGIN      
        1 actgggtgga ctaccctgac cgggagcgtg aactggctat catcgcgcag caagtacccg
       61 gcatcacggc caaactcagt gagcaagtgg caacgtttgt ggcgcgtctg cgcgaccgcc
      121 catttgccga tgcatttagc cgctcacctg gtattgctga aagcgtggaa tgggccaagg
      181 cactggtggc actcgaaaca ctgcaactcg accccgaggt cgtagaaaac accgctggcg
      241 tgctctttaa gcaacgcgat gacgtcgctg cgcttgaacc gttgatgcaa gagctgctgg
      301 cagctgaacc gtaaggttgc gccatggtgc tcggagacgc ccgaactggt aagttagccg
      361 acaacctgac tggctttgga cgcatgctgc gccgtgccgg cctgccggtc gacagcgcaa
      421 gaatcagctt ggcccagcaa gcactcgaca tggtcgatat cggtcataag gccgatgtcg
      481 aggcagcgct gcgcgcggtg ctcgttagcc gacaagaaga ccagcaggtg tttgccgact
      541 tgtttgaagc gtatttccgc aaccccgaga tcgccaaaca actgatggcc caattgttgc
      601 cgcaagccaa agccgagagc caccccccgg cgcgcagtgc gcgcgcgcaa gaggccttgc
      661 aagcgcccaa gccccagacc caacaagcca gagaagaaga aaaaatcgag cttgatgccg
      721 ccatgagtgc cagtgaccgt gcgcgcttga gacatgccga tttcaaccaa ttaagcgcca
      781 gtgagttcaa actcatcgaa cgtctggttc gtgaaatccc cttgcaatta cctacagtgc
      841 ccgcgcgccg ccggcgattt gccagtcatg gcgactcgct gcactggcag cgactgatgc
      901 gattcgcggc gcgtcatgac ggtgactttt tggagttgcc catgagcaag cgacgtgcag
      961 ttcagttgcc gttgttagcc ctcattgatg tatcaggttc gatggagcgt tatgcccgtt
     1021 taatgctcgc cttcttgcat caagccactc ggcaccatga tcgcgccatc tttgcgtttg
     1081 gcacgcaact cactgatcta agtgacgcct ttgcattgcg tgacaccgat caaatgctta
     1141 atcaagcgaa tgcgcagatt gctgactttg gcggtggcac acagcttggc ggggcactgc
     1201 aagaaatgcg cgagcagcat cgcaacctga tggtgggcaa ccgaaccttg gtgctactca
     1261 tcaccgacgg cttagatacc ggcagtcacg accgactggc ccacgaacta gactggctga
     1321 cccggcaggc acgggcaacc gtatggctta acccactatt gcgttacgat agctatcagc
     1381 cactagccgg tggtgcgcag gtgctggatc gctatgttga tgagatgtta gcgattcaca
     1441 atttagaaca cttgagcatg ctggccgccg ccatggctga gctcatgaaa aaaattcgct
     1501 aatcgagcga gacactcgtc cggaggacta gacaatgcaa atgcaaggaa gccgacaact
     1561 tacggccacc gcacaacaag catgggatgc cttaaatgac ccagagattc tcaagcaatg
     1621 catcccgggt tgccagaagt tcgagcttga gtccgagaat gtttataaaa cagccgcggc
     1681 catcaaaatc ggtcctgttt cggccaagtt caatggcaaa gtcgagttgt ctgatatcca
     1741 gccaccgaag tcctattcct tgaaatttga agcgcaaggc ggtgttgccg gacacggtaa
     1801 aggcgtctcg cacgttgaac tcgaagaaaa cgccgatggc gtggagttgc gctacaccgt
     1861 tgagtcacaa gtcggcggca agctcgcgca actcgggcaa cgcttgattg acggtgccgc
     1921 caaatcaatg gcagatgact tttttaagcg ctttgagaag gcgttggctg agcaaaccgg
     1981 gtcgaccaac gacacacaaa cggccgagtc agcctctgaa gacgctgcta cctcggttgc
     2041 cgctgaggca gggacttcaa cacctgcgac agcaccccga gcagcctcag gcggtggggt
     2101 cccgcgttgg atctggattg cggtggctgc cgctgtggct gccgtggtgg tctttagcca
     2161 aagttaatga tcggcgtaat aacagccgcg caaggcgttt aataccgggg ggggttaagc
     2221 catgcaaaac caggacttga tcgtactaaa gcgactgagc cagtggcgtg atgccggtca
     2281 acgagcagtg ttggtgactg tcatgcgcac ttgggggtcg tcgcctcgcc cggtcggttc
     2341 aatcatgtcc atgtgcgaaa caggcgcggt ggtcgggtca gtttcgggcg gttgtattga
     2401 agacgacctg atacgagaat ttacccagcc cgcccaagat cagggcg
//
LOCUS       DATBNL010000504         2505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_135674, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000504 DATBNL010000000
VERSION     DATBNL010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135674"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..>2505)
                     /locus_tag="VIC30_08790"
     CDS             complement(131..>2505)
                     /locus_tag="VIC30_08790"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804512.1"
                     /translation="MVSGRPELVLPRLDMTALNPDMRPSQPITLDNQRWIPVINDSPA
                     LGAYLAVLVPTRLLDQQRNTMLLALALVLAGLLLIVLIKHRKLDDKVLEPLSQIVTRI
                     RRIEAGEPITDIDTPKRGMPTELVEINRHIATMSQAIAERESKLTSTAAALATRESEL
                     SLILEHLPVPLIVFESAGEHLITFTNASFLDALGYSTTEARSLLNLFGHTCQDADTAM
                     RVSQAIEAMISAHRNTNEPADPVEVSIQCRSGIQHDFIVSAISLQDTAIATLVDVTAL
                     RQSQRALLDAKLQAEKQEQEQSQFLAMMSHEIRTPLTSILGITELLAQDELSARGRDL
                     VNRLENVNQLLLRIVNDVLDHSKIEAGELNLQSYRFDLHELIVKCQGMFAKLAQDKGV
                     SLSFDVQANCPVWRQADAFRLEQVLSNLIGNAIKFTEKGTVDVNVRCLDKADDPSWIR
                     IEVADTGIGIPKALESLIFEPYKQIENESLRQLGGTGLGLAISKRIIHAMGGQIGLNT
                     KPQIGTTFWLELPLPLATQPDATLQRSSPSPAQTHSHLKGAHILVVDDSAAIQFLIAE
                     MLAPLSISCHSAADGLQALTLLKDSTEGFDAVLMDIQMPNMNGIDCTCAIREDSTLKH
                     LPIIAMTADLVGTQRQEISEAGANALLEKPLRQEQLIECLAIQIEASAWRLFPHITGI
                     DRNHALQTMGQNADLFARLLRVFLRENADAVQCLLAQIDNGNLDGALNRLNQLQAGAS
                     QIGALKIRDIAQQIEKLLTSKAPINNALIDAIDQELTQIAQSAKRDGLLT"
BASE COUNT          550 a          603 c          699 g          653 t
ORIGIN      
        1 tggtagagcg gcgcccttac aaggcgtagg tcagcggttc gaacccgtta gcacccacca
       61 cgagaccttc tctccaaaca ctgcctaaag cccgactgct taaatcgact gttcactgct
      121 gtgaatggct tcaggtcagt agtccatctc gctttgctga ttgcgcaatt tgcgtaagct
      181 cttgatcaat ggcatcgatt aaagcgttat tgataggtgc tttggaggtc aggagctttt
      241 ctatttgttg cgcaatatct ctgattttta aggcgccaat ttgacttgcg ccggcttgaa
      301 gttgatttag ccgattgagc gcaccatcta gattaccgtt atcaatttgc gccagtaggc
      361 actgcacagc atctgcattc tcccgcagaa atactcgaag caggcgggcg aataaatcag
      421 cattttgacc catggtctga agggcgtggt tacggtcaat gcctgtgatg tgtggaaaca
      481 gtcgccaggc agatgcttca atctgtatgg caagacattc aatgagttgc tcctgtcgca
      541 atggcttttc tagcaaagcg ttggcacccg cttcgctaat ctcctggcgc tgcgtgccca
      601 ccaagtcagc ggtcatggca atgatgggca ggtgctttag agtgctgtct tcacggatgg
      661 cgcaggtgca atcaatccca ttcatgttgg gcatctgaat atccatgaga accgcatcaa
      721 acccctcagt gctatctttc aataaggtca gggcttgaag gccatcagct gcgctgtgac
      781 aactgatcga caagggtgcc agcatttctg caataaggaa ctgaatcgca gcgctgtcat
      841 caaccactag gatatgcgcg cccttgaggt gagagtgtgt ttgcgctggg ctcgggcttg
      901 aacgttgtag ggtggcgtca ggctgggttg caagcggcag tggtagctca agccaaaacg
      961 ttgtgccgat ttggggtttg gtattcaatc caatctgtcc acccatggcg tggataatgc
     1021 gtttgctaat ggctagcccg agcccggtgc caccgagttg gcgcagtgat tcgttttcta
     1081 tttgtttgta gggttcaaat atcaatgact ctagggcctt gggtatgccg atgccggtgt
     1141 cggcgacttc gatgcgaatc caagacggat cgtcggcctt gtccaaacac cgcacgttga
     1201 catccacggt gcctttttcg gtgaacttaa tggcgttgcc aatgaggtta gacagtactt
     1261 gttcgagtcg aaaggcgtca gcttggcgcc agactggaca gtttgcttgt acatcaaacg
     1321 acagtgacac ccctttgtct tgagccagtt tggcaaacat accttggcat ttgacaatta
     1381 gctcgtgaag gtcgaatcgg taagattgta ggttgagctc accggcctcg atctttgagt
     1441 gatccagcac atcattgaca atgcgcaaca gcaattgatt gacgttttcc agacgattga
     1501 ctaagtcgcg accgcgtgcg ctgagttcgt cttgagccag cagttccgtt atgccaagta
     1561 tgctggttag cggggttcgt atttcatggc tcatcatagc cagaaactgg gattgttctt
     1621 gttcttgctt ttctgcctgg agtttggcgt ctagcagcgc gcgttgtgat tgcctgagcg
     1681 ccgtgacgtc aaccaaagtg gcgatggcgg tgtcttgcaa agaaatggcc gagacgatga
     1741 agtcgtgctg tatgccgctg cgacactgaa tagagacctc gaccggatcg gctggttcat
     1801 tggtattgcg atgcgcacta atcatcgcct cgatggcctg actcacgcgc atggctgtat
     1861 cagcgtcttg gcaagtgtga ccaaataagt tgagcaaact gcgtgcctct gtggtgctgt
     1921 agccaagggc atctaagaaa ctggcattgg taaaggtaat caggtgctca ccggcagact
     1981 caaatacgat taatggaacg ggtaggtgct ctaggatgag gctcagttca gactctcggg
     2041 ttgccagtgc ggccgcagtc gaggttagct ttgattcgcg ctcagcaatg gcctgagaca
     2101 tcgtcgcaat atgccgattg atctccacga gttcagttgg catgccacgc ttgggtgtat
     2161 ctatatcagt aatgggttca ccggcctcga tgcgtcgaat ccgtgtcacg atttggctca
     2221 gaggctcaag cactttgtca tcgagtttgc gatgcttgat caacacaatg agcagtagac
     2281 ccgctaaaac caacgccagc gcaaggagca tggtgttgcg ctgttggtcc agcaatcggg
     2341 ttggcaccag tacagccaaa taggcgccta gcgctggtga gtcattgatg accgggatcc
     2401 agcgctggtt atctagtgta attggctggc ttgggcgcat gtcagggttt aatgccgtca
     2461 tgtccagtcg tggtagaacc agttccggtc ggcctgagac catga
//
LOCUS       DATBNL010000505         2517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_165991, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000505 DATBNL010000000
VERSION     DATBNL010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165991"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VIC30_08795"
     CDS             complement(<1..720)
                     /locus_tag="VIC30_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEY7804513.1"
                     /translation="MSVFRLGRIILVSLRYRLDELVLSGFDHPVAVRLLRIVRMGSPP
                     KMPRGQRLRLALESLGPIFVKFGQVLSTRRDLIPPDVANELAMLQDHVAPFPSAQAAQ
                     IIEDALGAPPAEIFAHFEVDPVASASIAQVHFATLHDGKEVAVKVLRPGMLEVIDHDL
                     GLMRQVARLVERLSPDGKRLKPREVVAEFDKYLHDELDLLREASNCSQLRRNFSPGTD
                     RGDLLMVPEVYWDYCANNVFTI"
     gene            complement(717..1343)
                     /locus_tag="VIC30_08800"
     CDS             complement(717..1343)
                     /locus_tag="VIC30_08800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804514.1"
                     /translation="MQPPRQVVCDLLNRMLAREPAVLALLAEHAGQTFRLVAEPVDAT
                     ITIKHDGTLSAVDVSDVSIVPDVTLKIDTREVWASGWRPGQPVPERAGLVQVSGDAAL
                     AQTLSMLAKSWRVDPEDLLSSVVGDVAAVRLVGGAKRLATLATQFVTRTTENVAEYAV
                     HESRVLVGQSSQHAFKEDLTALMGRLDACGARVQSLSDRVSQDAGGKA"
     gene            complement(1570..2502)
                     /locus_tag="VIC30_08805"
     CDS             complement(1570..2502)
                     /locus_tag="VIC30_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44-like domain-containing protein"
                     /protein_id="HEY7804515.1"
                     /translation="MMKAFQGRWLAALMIGLSGFALMAVSFDSEARRFGGGFSSGRQS
                     VNVMQQKQAVTPPAATAPRAAGAAGGAATAGSRWLGPLAGIAAGLGLAALLAHFGFAG
                     AMADLLVIALIAAIAIFGIRFIMRTLRSGLSPEALGNTSAGMQRRQYGRDSTEGPGQP
                     EVQPPMSGLLGPGPMHVESPAPRVGDWFIPADFDTATFLEEAKRQFVAIQKAWDTVDF
                     DGLQSRLTEELYAEYAGKMAAHGGKNYTEVVLLNADLLGIEKLNDGHLASVRFSGMIR
                     EDAQSEATAFEEVWNLYKPDGKGWLLAGIQQLGQ"
BASE COUNT          598 a          794 c          623 g          502 t
ORIGIN      
        1 tatcgtaaaa acgttatttg cgcaatagtc ccagtacacc tcggggacca tcaacaagtc
       61 accgcggtcg gtacctggcg agaagttacg tcttaactgg ctacagtttg aagcctcacg
      121 cagcaagtcc agttcgtcat gcaaatactt atcaaattcc gccacgacct cgcgcggctt
      181 cagacgctta ccatcgggcg acaggcgctc aacgagccta gcgacttgcc gcatcaaccc
      241 caaatcatga tcgatgactt cgagcatacc gggcctgagc accttgaccg ccacttcctt
      301 gccgtcatgc aaagttgcaa aatgcacctg ggcgatcgaa gctgatgcca ccgggtcgac
      361 ctcaaaatga gcaaagattt ctgccggagg cgcaccaagc gcatcctcaa taatctgtgc
      421 cgcttgcgcc gaaggaaacg gtgccacatg gtcttgcaac atggccagtt cgttggcgac
      481 atctggtggt atcaggtcgc gtcgggtcga gagcacttgg ccaaacttca caaatatcgg
      541 ccctagtgac tccagcgcta gtcgcaatcg ctggccacgc ggcatcttag gtggcgaacc
      601 catgcgcaca atgcgcaata accgaactgc caccggatga tcaaaacccg aaagcaccaa
      661 ctcatcgagt cggtaacgca agctcaccaa gatgatgcga cctaggcgaa acacgctcat
      721 gctttgcctc ccgcatcttg actgacgcga tccgacaaag attgcacgcg cgcgccacat
      781 gcatccagac gacccatcaa tgccgtcaaa tcttctttaa aggcgtgctg gctcgactga
      841 ccaacgagca cacgcgattc gtgaaccgcg tattcagcca cattctcggt tgtgcgtgtg
      901 acgaactgcg tggccaatgt ggcaagacgc ttagccccac ccacgagccg cacggctgcc
      961 acatcgccca ccacgctcga gagcaaatcc tcgggatcga cacgccatga tttagcgagc
     1021 atggataacg tttgtgccaa ggcggcgtca ccactgacct gaaccaggcc cgcacgttcc
     1081 ggtacaggct gtcccgggcg ccagcccgat gcccatacct cacgggtatc tatctttaag
     1141 gtcacgtcag gcacaatcga cacatccgag acatccaccg ccgagagtgt gccgtcatgc
     1201 ttaatggtta tggtggcatc gactggctcg gccaccaaac gaaatgtttg tcctgcgtgc
     1261 tcagctagca atgccaatac cgcaggctcg cgcgcaagca tgcgattcaa aagatcgcaa
     1321 actacctggc gtggtggttg catccacggc gcctggcgtg ctgagacaag ggcgggcgag
     1381 ctcgaaatgg cagtgacctc aaaggcagga gtctgtctag cgtacttcac ctcagtttaa
     1441 ccgctgatca cgcaaaatca gtttgtccat tgccgccaaa atacattggc cgaagcaacg
     1501 tggcgcaaca tcaagcgctc ttgatcggtt ttattgctgg ttcggtggta gtttcggttg
     1561 ttggctcagt tattgaccca actgctgaat acccgccaac aaccagcctt tcccatcggg
     1621 cttatagagg ttccaaacct cttcaaacgc cgtggcttct gactgcgcgt cctcacgaat
     1681 catcccggaa aaccgcacac ttgctagatg cccatcatta agcttctcaa tacctagcag
     1741 atcggcattt aacagcacca cttcggtgta gttcttacca ccgtgcgcgg ccatttttcc
     1801 ggcgtattca gcatacaact cttcggtcaa acgtgactgc agaccatcga aatccaccgt
     1861 atcccatgct ttttggatag caacaaactg gcgtttggct tcctcgagaa acgtcgccgt
     1921 atcaaaatca gctggaataa accaatcgcc aacgcgcggg gctggtgact caacatgcat
     1981 tgggcccggc ccaagcaacc cggacatggg tggctggacc tccggttggc ctggcccttc
     2041 agtgctgtca cggccatatt gccggcgttg catgcccgca gatgtgttgc ccaaggcttc
     2101 aggacttaag ccagagcgca aggtgcgcat gatgaaacga ataccgaata tcgcaatcgc
     2161 tgcgatcaag gcgatcacca gcaaatctgc catcgcgcct gcaaaaccaa aatgcgccag
     2221 cagcgcggcc agaccaagac ccgcggcaat acccgccaac ggccccaacc aacgcgaccc
     2281 tgctgtcgct gcgccacctg ctgcacccgc ggcccgcggt gcagttgccg ccggcggtgt
     2341 gaccgcctgc ttttgttgca tgacattgac cgactgacgg ccactgctaa agccaccccc
     2401 aaaacggcgt gcctcggaat caaacgacac cgccatcagc gcaaaaccgc tcaatccgat
     2461 catgagcgcc gcgagccacc gcccttgaaa tgctttcatc atctatggtc tcctgcc
//
LOCUS       DATBNL010000506         5990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105847, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000506 DATBNL010000000
VERSION     DATBNL010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105847"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VIC30_08810"
     CDS             <1..723
                     /locus_tag="VIC30_08810"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY7804516.1"
                     /translation="IENYSAWHNLPIGTLENGFGGLGTELVFNNDHVKTRLGILQVWT
                     KDKRFVYGGRAGASLPMFTNGECGMWMNSSAYYGSIKSQAKFKFGQTMMPLDTLVADK
                     PQNSIIGGATLWVLQGRPDAEYPGVAEFLAFLASPEIQANWAMESGYVPITKAASSVM
                     TVEGFYADNPGTDTAVKELSLNPPTPNSKGLRFGNFVQIRDVINEEMEAIWAGDKTSS
                     QAMDTAVERGNKLLRRFQKSVQ"
     gene            944..1828
                     /gene="ugpA"
                     /locus_tag="VIC30_08815"
     CDS             944..1828
                     /gene="ugpA"
                     /locus_tag="VIC30_08815"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011350698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpA"
                     /protein_id="HEY7804517.1"
                     /translation="MLKRSHFQPSLLPYLLVAPQIIITLVFFIWPALQALYESFYIQS
                     AFGTGSTFVGLENFIELFEDPLYIESIWRTFMFSGAVALLAMSLALTFAALADRVIRG
                     AMTYRTLLIWPYAIAPAVAGALWIFMFDPTLGIVSYALDMVGVDWNQAVNGTQAMALV
                     IMAAAWKQIAYNFLFFLAGMQAIPPSVYEAAAIDGASPMRRFFNITLPLLAPTTFFLL
                     VMNVVYAFFDTFGIIDAMTQGGPANATEILVYKVYQDGFVGLDLGGSAAQSVVLMFIV
                     IALTVVQFKFVEKKVQYA"
     gene            1856..2707
                     /gene="ugpE"
                     /locus_tag="VIC30_08820"
     CDS             1856..2707
                     /gene="ugpE"
                     /locus_tag="VIC30_08820"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006394817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015794 - glycerol-3-phosphate
                     transmembrane transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HEY7804518.1"
                     /translation="MVERRPMSDFLAHAGLIVSIILIAFPVWVAFVAATHDATRMTQV
                     PLPLWPGDHLWENLKTVFLTGYTGSSAGVPMWLTLTNSLVMALSIAIGKIMISLIAAY
                     AVVYFRFPFRMFFFWLIFVTLMLPVEVRILPTYEVVANLGMLNSYAGLSIPLIASATA
                     TFMFRQVFLTIPEEMLESARMDGAGPIRFFWDILLPLSRTNIAALFVILFTYGWNQYL
                     WPLLVTTDPNMTTIVMSIKQMLSAAEQSPQWNLIMMTSLLAMLPPLLVVVVMQRLFVK
                     GLTETDK"
     gene            2795..3820
                     /gene="ugpC"
                     /locus_tag="VIC30_08825"
     CDS             2795..3820
                     /gene="ugpC"
                     /locus_tag="VIC30_08825"
                     /inference="COORDINATES: protein motif:HMM:NF008653.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEY7804519.1"
                     /translation="MADIVLDNVKKAYGTTEVIHGINGQINNGEFVVVVGASGCGKST
                     LLRMLAGLETVSSGEIRIGGKRVNELEPSERDIAMVFQNYALYPHMTVRENMSYSLKI
                     KGRSKAEINDAVNQAAEILEITPYLDRKPRQLSGGQRQRVAMGRAIVRDPKAFLFDEP
                     LSNLDAKLRVQMRVEIKQLQRRLGTTSVYVTHDQVEAMTLGDRLMVLSGGKVEQFGAP
                     IDLYEKPQTQFVAGFIGSPSMNFFNTKVTENGSKLLVGEHTPIRLQTALQVKDATVTA
                     GIRPEHLFLSDDGVFEIELLLQEHLGAETLLHAKLTDSGQAVTVLVPGYQPDKVHVFG
                     TDGGRLN"
     gene            complement(3982..4704)
                     /locus_tag="VIC30_08830"
     CDS             complement(3982..4704)
                     /locus_tag="VIC30_08830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009551605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7804520.1"
                     /translation="MAGVHGITEHMMDALRSTLADQAYQSIKVKLAELDLMPGDRLSE
                     KELADQLGISRTPVRQALQRLHHEGLLDLSPKIGWAVPQLNFDRLDELYDFRVVIEQY
                     AAQCCATTPECLEKLLPLKAIWCVPTTERLSDPVEVGLLDEQFHETLVAASGNREMVR
                     AHGYITEHIRLIRRLDFIKPERVEATYNEHSNLLNLIFAGDVEAVSSALKAHILSSKH
                     QSRAITLEAMYQRRQAPVVSSN"
     gene            complement(4671..>5990)
                     /locus_tag="VIC30_08835"
     CDS             complement(4671..>5990)
                     /locus_tag="VIC30_08835"
                     /EC_number="3.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006043.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase"
                     /protein_id="HEY7804521.1"
                     /translation="VPFALGTDTAGSGRVPAGFNNLVGIKPTPGRFSIKGVVPACQTI
                     DCVSILSLTLEDGACVSRLLAATGSTPGELQFHCPPQSPTFAFAKRLRIGVPSQAVFT
                     DTSYKKQFEAVIRELPTAWDIELVPIDMSELDAIAEQLYRGPWIAERLITAHDCLDNN
                     VAGLDPTVRTIIEQGRAFSASDAFEALYSVRAHAARVANMWQSMDVLLTPTAPGLPRY
                     TDVQADPIGVNSALGKYTNFVNLLGWSALSTPASFTQSGLPFGVTWIAPAGCDEALLD
                     VGERWMRWRELPLGCHLRAAHTSSSERLEYQPAGSHRIAVVGAHLSGMPLNTQLQEAG
                     ARLAMVTTTSANYDLYHLPDTTPPKPGLVRVHEGGHAIALEVYDVPARAVSGFLLKIP
                     SPLGLGKVELADGQWVTGFICEPSGIIGAKDISAFGGWRAYMESLNT"
BASE COUNT         1372 a         1658 c         1557 g         1403 t
ORIGIN      
        1 attgaaaact actccgcttg gcacaacctg cccatcggca cactagaaaa tggcttcggc
       61 ggactgggca cggaactggt gtttaacaac gatcacgtta aaacccgtct tggcatcctg
      121 caggtatgga ccaaagacaa gcgttttgtg tatggcggtc gtgccggcgc ctcgctgccc
      181 atgttcacca acggtgagtg cggcatgtgg atgaactcct cggcttacta cggcagcatc
      241 aagtcacaag ccaagttcaa gttcggtcag accatgatgc cactcgatac gttggtcgct
      301 gacaagcccc agaactccat cattggtggt gccacgctgt gggtgttgca aggacgcccc
      361 gatgcagagt accccggtgt tgccgagttc ctggcgtttt tagcctcgcc tgaaattcag
      421 gccaactggg ccatggaaag tggttacgtg ccgatcacca aggctgcctc aagcgtgatg
      481 acggtcgagg gcttttatgc tgacaaccca ggtacggata cggccgttaa ggaattgtca
      541 ctgaacccac cgacacctaa cagcaaaggc ctgcggtttg gtaacttcgt tcagatccgc
      601 gatgtgatca atgaagaaat ggaagccatt tgggccggtg acaagacttc aagccaggcg
      661 atggataccg ccgtcgagcg tggcaacaag ctgttgcgtc gttttcaaaa gtcggtacag
      721 taacgttagg tgctgtcagt cgtagtatcc tctggcggcc cagtagggct gcctactagg
      781 gctccccacc agggctgcca gaggtcagtc gattgatcac gttgctgatt gatcacttcg
      841 ctttttcttt cttgctttct tgcgcgttgc ttttttgttt tcttgttttt actgttttgt
      901 gtgaacattc tctgatctga agagcgagtg cccacaggcg atcatgctta aacgatccca
      961 cttccagcct tcactgctgc cctatctgtt ggttgccccg cagatcatca tcacgctcgt
     1021 cttttttatc tggcctgcac tgcaggcgct atacgagagt ttttacattc aaagcgcttt
     1081 cggtaccggc agcacctttg tcggacttga gaacttcatc gagctctttg aagacccgct
     1141 ttacatcgag tcgatctggc gcacctttat gttttctggg gcggtggcgc tactggccat
     1201 gagcttggcg cttacctttg ccgcactggc tgatcgcgtg attcgcggcg ccatgaccta
     1261 ccgcaccttg ctgatttggc cgtatgcgat tgcaccggcc gtggccggcg cactgtggat
     1321 ttttatgttt gaccccacgc tgggcatcgt cagttatgcg cttgacatgg tcggcgtgga
     1381 ctggaaccag gccgtcaacg gcacccaagc catggccttg gtcatcatgg cagccgcctg
     1441 gaagcaaatt gcatataact ttcttttttt cctggccggc atgcaagcca ttccgccgtc
     1501 agtctatgag gccgctgcca tcgatggcgc aagccccatg cgccggttct ttaacatcac
     1561 cctgcccttg cttgcgccta caaccttttt tttgttggtc atgaacgtgg tgtacgcgtt
     1621 ttttgacacg ttcggcatta tcgatgccat gacccagggt gggccagcga acgccactga
     1681 gattctggtc tacaaggtgt atcaggatgg ttttgtcggt cttgacttgg gtggctcggc
     1741 tgcacagtcg gtggtgctga tgtttattgt gattgcattg acagtggtgc aattcaaatt
     1801 cgtcgaaaaa aaggtgcagt atgcgtaagc gccaaacaaa gagggcgcac gcatgatggt
     1861 cgagcgccgc ccgatgagtg actttctggc ccacgccggg ctgattgtga gcatcatcct
     1921 aattgccttt ccagtctggg tggcgtttgt cgcggccacc catgacgcca cacgtatgac
     1981 tcaagtaccc ttgccgctgt ggccaggtga ccacctttgg gagaacctta aaaccgtgtt
     2041 tctgaccggt tacaccggat cgagtgccgg tgtaccaatg tggttaacgc tcaccaactc
     2101 tttggttatg gcgttgtcca ttgcaatcgg caagatcatg atttccctca ttgctgccta
     2161 tgccgtggtg tatttccggt ttccttttcg gatgttcttt ttctggctga tttttgtcac
     2221 gctcatgtta cccgtggaag tcagaatcct accgacttat gaagtcgtgg ccaatctggg
     2281 catgctcaac agttacgccg gcttatccat tccactcatc gcttcagcta cagccacatt
     2341 catgtttcgt caggtgtttt taaccatccc tgaggaaatg ctcgaaagtg cgcgcatgga
     2401 cggtgctggg cctatccggt ttttttggga tatcttgctg ccgttatcgc gcaccaacat
     2461 tgcggcactc ttcgtgattc tgtttaccta tggctggaac caatacctgt ggccattgct
     2521 tgtgaccacc gatccgaaca tgaccacgat tgtgatgagc atcaaacaga tgctctcggc
     2581 tgctgagcag tcaccacagt ggaacttgat catgatgacc tcactattag ccatgttgcc
     2641 accactgctc gtcgtcgtgg tgatgcaacg cctgtttgtc aaagggctga ccgagaccga
     2701 caagtagaca ggcaatgagt agataggcaa cgaatagata gacaacgcgt agataggcac
     2761 atcgcaaaaa aaactcagag agaaaacaca gaccatggcc gatatcgttc tggacaatgt
     2821 aaagaaagct tacggcacca ctgaggtgat tcacggcatc aatgggcaga tcaacaacgg
     2881 agagtttgtc gtggtcgtgg gcgcatcggg ctgcggcaaa tcgacgctgc tcagaatgct
     2941 cgcagggctt gagacggttt cctcagggga aattcgtatc ggtggcaaac gcgtcaacga
     3001 actcgagcca tccgagcgcg acatcgccat ggtgtttcag aattacgcgc tctaccccca
     3061 catgaccgtt cgtgagaaca tgtcctatag cttaaagatc aaggggcgct caaaggccga
     3121 aatcaacgac gccgttaacc aagctgccga aattctggaa atcactccgt accttgatcg
     3181 caagccacgt caactcagtg gtggccaacg ccaacgtgtg gccatgggtc gcgccattgt
     3241 gcgcgacccc aaggcgttcc tctttgatga accgctttcg aacctagacg ccaaactgcg
     3301 tgtacagatg cgtgtagaaa tcaaacaatt gcaaagacga ctcggcacca ctagcgtcta
     3361 cgtcacccat gatcaggttg aggccatgac acttggtgac cgtttgatgg tgctatcggg
     3421 tggcaaggtt gaacagttcg gcgcaccgat tgacctctat gagaaaccac aaacgcaatt
     3481 cgtggcaggc tttattggca gtccatcgat gaatttcttt aacaccaaag ttaccgagaa
     3541 cggcagcaaa ctgctggtgg gagaacacac gccgatccga ctacaaaccg ccttgcaggt
     3601 caaagacgca actgtgacgg ccggtatacg acctgagcat ctgttcttat ctgacgatgg
     3661 ggtatttgaa atcgaactgc tgctgcaaga acacttggga gccgaaaccc tactgcatgc
     3721 caagctcact gacagcgggc aggcggtcac agtgctagtt cccggctatc agccagacaa
     3781 ggtgcacgtg tttgggactg acggtgggcg gttgaactaa acagcagttg actcaccctt
     3841 gcgccaactg agcccaacca gcataaagca accaagcttc gaagtgcgcc cagcatggtt
     3901 ttgcctcgcc agacgtggcg gtgaagtgaa atgaagtgag gtgaagtgag gtgaaagtca
     3961 tgcccgacct ctacatatcg ctcagttaga actcaccacc ggggcctgtc gccgttgata
     4021 catggcttca agcgtaatgg cccgtgattg gtgcttacta gacagaatat gtgctttcaa
     4081 tgctgatgag actgcttcaa cgtcgccagc aaagatcaaa ttcagcaggt ttgaatgctc
     4141 gttgtacgtc gcctcaacgc gttctggctt gatgaaatcc aaacggcgta tcagtcgaat
     4201 gtgctctgtg atgtagccgt gtgcacgaac catttcccgg ttgcctgagg cagccaccag
     4261 cgtttcatgg aattgctcat caagcaggcc cacttctacc gggtccgaca atcgctcggt
     4321 cgtgggcacg caccaaatgg cttttaaggg caacaacttt tccagacact cgggcgtggt
     4381 cgcacagcac tgcgcggcat actgttcaat cactacccgg aaatcataga gttcatctag
     4441 tcgatcaaaa ttcagttgtg gcaccgccca gccaatttta ggcgacagat ctagtaggcc
     4501 ctcgtggtgc aagcgctgca aggcctgacg cacaggtgta cgactgatac cgagttggtc
     4561 ggctagctct ttttccgaga gccgatcacc tggcatcaaa tcaagctcag cgagtttgac
     4621 cttaatactc tgataagcct ggtcggctaa ggtcgaacgc aacgcatcca tcatgtgttc
     4681 agtgattcca tgtacgcccg ccatccacca aaggctgaaa tatccttggc accgatgata
     4741 cctgatggct cacagataaa accagtcacc cactgaccat cggcgagttc cactttacca
     4801 agacccaagg gactcggaat cttcaacaga aaacccgaca ccgcccgagc aggcacgtcg
     4861 tagacttcaa gtgcgatggc gtggccacct tcatggactc gcaccaaccc gggcttgggc
     4921 ggtgtggtgt caggcaagtg atagagatca tagttcgcac ttgttgtggt caccattgcc
     4981 agacgggcac ccgcttcttg tagctgcgta ttgagcggca tgccacttaa gtgtgcgccc
     5041 accaccgcaa tgcggtgtga gcccgcaggt tgatattcaa gccgctcgga gctagaggtg
     5101 tgtgcagcgc gcaaatgaca ccccaaaggc aactcccgcc aacgcatcca gcgctcgccc
     5161 acatccagca aggcttcatc acatccggct ggtgcaatcc aggtcacacc aaatggcagc
     5221 cctgattgcg taaaactagc cggcgtcgac aatgctgacc agcccaacag attcacaaaa
     5281 ttcgtgtact tgcccagcgc actgttgaca ccgatcggat cggcctgaac atcggtgtaa
     5341 cgcggtaatc ccggtgcagt gggcgtgagc aacacatcca tcgattgcca catattcgcc
     5401 acgcgcgctg catgcgcacg caccgaatat agggcttcaa acgcatcact ggcactaaac
     5461 gccctgcctt gctcaataat ggttctaacc gtcggatcca aacccgccac gttattgtcc
     5521 aggcagtcat gcgcggtgat caaacgctca gcgatccaag gaccgcgata cagttgctcg
     5581 gcaatcgcat caagctcact catgtcgatg ggcaccaact cgatatccca tgcggtgggc
     5641 agctctcgta tcaccgcctc aaactgtttt ttgtatgacg tatccgtaaa cacggcctgc
     5701 gatggcacac cgatgcgcag acgcttggca aacgcaaacg tcggtgactg aggtggacag
     5761 tggaactgta attccccagg tgtactaccc gtggcagcga gcaaccgact gacacacgca
     5821 ccgtcttcta acgtcagact cagaatcgac acacagtcaa tggtctggca ggcgggtaca
     5881 acacccttaa tgctaaaacg cccaggcgtg ggcttgatgc ccaccaggtt gttaaaccct
     5941 gctggcacgc gacccgaacc ggccgtgtcc gtgcccaaag caaacggcac
//
LOCUS       DATBNL010000507         5964 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_66031, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000507 DATBNL010000000
VERSION     DATBNL010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5964
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66031"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VIC30_08840"
     CDS             complement(<1..747)
                     /locus_tag="VIC30_08840"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006220866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804522.1"
                     /translation="MADQPRASQARIGFIGLGKMGWPMASRLAQAGYTLTLMDADASV
                     ANQLATETGGHVATSGKALAMASEVVITILPNSQIVQSVLEGLDGLLAGLQPDTVIID
                     MTSGVPSMTQALAREVEKARAILVDAPVSGGVPRAKTGELSIMFGGDQSVLDQVKPVL
                     SCMGNAIERIGDVGSAHAMKALNNLVSAGGFLIGIEALMIGKRFGLSPEKMVDVLNAS
                     TGMNNSTQKKFKQYVLSGKYNAGFGLDLMVK"
     gene            complement(740..1153)
                     /locus_tag="VIC30_08845"
     CDS             complement(740..1153)
                     /locus_tag="VIC30_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008163645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY7804523.1"
                     /translation="MTAKQETDKLFEDGMQLRREVLGKEYVDSSVSKADDFMMAFQHI
                     TTEWCWGYAWTRPGLDKKTRSMLNLAMLTALKCPNEIKLHVRGALNNGVTVDEIKEIL
                     LHATVYSGIPAGLEAFKAAHSVLVEEGALKGKDNG"
     regulatory      1302..1407
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01057"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="S-adenosyl-L-homocysteine riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="S-adenosyl-L-homocysteine"
                     /db_xref="RFAM:RF01057"
     gene            1485..2900
                     /gene="ahcY"
                     /locus_tag="VIC30_08850"
     CDS             1485..2900
                     /gene="ahcY"
                     /locus_tag="VIC30_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEY7804524.1"
                     /translation="MNAVTDKFTDYVVTDIGLAEWGQREIKIAETEMPGLMAVREEYE
                     AVKPLKGARITGSLHMTIQTAVLIETLEALGAEVRWASCNIFSTQDHAAAAIAANGTP
                     VFAKKGESLVEYWEYTHRIFDWPDGHFANMILDDGGDATLLLHLGSKAEKDISVLDKP
                     SSEEEVALFAAIKDQIKRDPTWYSTRLAHIRGVTEETTTGVHRLYQMSKRGELAFAAI
                     NVNDAVTKSKFDNLYGCRESLVDGIKRATDVIVAGKVAVVCGYGDVGKGSAQALAALR
                     AQVWVTEIDPICALQAAMEGYKVVTMEEACDKADIFVTATGNYHVITRAHMERMKDQA
                     IVCNIGHFDNEIDVAGIEDLKWEEIKPQVDHVIFPDGKRIIMLAQGRLVNLGCATGHP
                     SFVMSSSFTNQVIAQIELFTRNDEYKAGDVYVLPKHLDEKVARLHLKKIGAHLTEMSP
                     QQAAYINVEQNGPYKPEHYRY"
     gene            2953..3294
                     /locus_tag="VIC30_08855"
     CDS             2953..3294
                     /locus_tag="VIC30_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEY7804525.1"
                     /translation="MMLIVVWILNAVALLAVAFVLPGIVIGSFWSAMLAALVLGLLNT
                     LVKPLLILLTLPITVVTLGLFLLVLNALVFWLAGSLFKGFQVEGFWWAVAGAILYSVI
                     SSLFSMLIFQQ"
     gene            3291..4139
                     /gene="metF"
                     /locus_tag="VIC30_08860"
     CDS             3291..4139
                     /gene="metF"
                     /locus_tag="VIC30_08860"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEY7804526.1"
                     /translation="MTTHSGQAFSLEFFPPRDEAARERLTQSAQTLAAIEPSYVSVTF
                     GAGGTTRDGTMETVDQLKSMGFDAAPHLSCIGSTRQQLRDLLDHYQSAGIKRIVALRG
                     DMPSGMGSVGGQDMLRYAAELVALIREHSGDWFHIEVGAYPEMHPQAPGPQADLRHFV
                     QKVQAGADSAITQYFFNADAYFDFVDRAHMMGVTIPIVPGIMPITNYTQLMRFSEMCG
                     AEVPRWIRLRLAEFGDDRASIRAFGADVVTEMCQTLLENQVPGLHFYTLNNAAATLAI
                     WNGLSR"
     gene            complement(4131..4772)
                     /locus_tag="VIC30_08865"
     CDS             complement(4131..4772)
                     /locus_tag="VIC30_08865"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEY7804527.1"
                     /translation="MTQNNADLLRSQLKKARRDMPEAQRQRAGLLMRAKLFTWLATTR
                     TRCAEAGTPPPSIVAGFWPLADEPDLTALYRQWHEQDIVVVLPVMQETDQTLQFHAWE
                     PGMTLREVAFGVQEPQLSRPLLPDVVLVPTLGFTPQGQRMGYGKGFYDRTLASFAGLN
                     HHPTLIGVAWDNANLHDLDPSYEAKSHDHPLDAIATSTAWHPGEPRWRGIASA"
     gene            4871..>5964
                     /locus_tag="VIC30_08870"
     CDS             4871..>5964
                     /locus_tag="VIC30_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY7804528.1"
                     /translation="MLHKGIRQIALALPALLFAPWAASFTYNVDTPTAQAVAKAKEAV
                     NARQWNQLPTLVAQTQGDVLQIYADYWLAEREVWAAKDVTNVPVAEAFLQRYPGSYMA
                     DKLKANWILAADEAGSFKKIRELEDFLWYNREVRCAKLEARHMTGQRATSEQAMAVFR
                     PGKACWAMLSQFVADDVMTRDDMVILLQDALERNHTKTADRIASLLFDRQTLGQYRAM
                     MKSPAGWLKQYKGNATGDDAVIAAIALVRQGRSNPSTAARELERTWTARLPAAASGWA
                     WSQLAFQSALDLETRADAWYQMAGNTRLSETGYAWRVRAALRQPIINWAWVQQAIEWM
                     PPEQQAEIDWQYWRARALAAQGQTGQAQAI"
BASE COUNT         1282 a         1571 c         1704 g         1407 t
ORIGIN      
        1 tttgaccatg aggtcaagtc caaagccagc gttgtatttg cctgacagca cgtattgctt
       61 gaacttcttc tgtgtggagt tgttcatgcc ggtcgacgcg ttgagtacat cgaccatttt
      121 ctcggggcta agcccaaagc gtttgccaat catgagcgct tcgatgccta tcaaaaagcc
      181 gccggcagac accagattat tcagtgcttt catggcgtgt gctgacccta cgtcaccgat
      241 gcgttcaatg gcgttaccca tgcacgacag cacaggtttg acttggtcca gcacggactg
      301 gtccccaccg aacatgatcg aaagctcacc ggttttagcg cgtggcacac cgccagatac
      361 gggggcgtca accaagatag cgcgggcttt ttcgacttct ctggctaggg cctgtgtcat
      421 gcttggcacg cccgaggtca tgtcaataat gacggtgtct ggttgcaagc cagcgagtag
      481 accgtctagg ccttcgagca ccgactgcac gatctggcta ttgggcaaga tggtgataac
      541 gacctctgaa gccatggcca gcgctttgcc gcttgtggcg acatggccac ctgtctctgt
      601 ggccagttga ttggccacag acgcatcagc atccattagg gtgagggtgt agccggcttg
      661 agcaagccgg cttgccatgg gccagcccat cttgccaagc ccaataaagc cgatgcgagc
      721 ttggcttgcc cggggttggt cagccattat ctttgccctt gagcgcacct tcttcgacca
      781 gcacgctgtg ggccgctttg aaagcctcca gtcccgcagg gatgccgctg tagacagtag
      841 cgtgcaacaa gatttcttta atctcatcga cggtcacgcc gttgttaagc gcaccacgca
      901 cgtgcagctt gatctcgtta gggcatttca gggcggtcaa catggcgaga ttgagcatgc
      961 tgcgggtttt tttgtccaga ccgggacgtg tccatgcata gccccagcac cattcagtgg
     1021 tgatgtgttg aaacgccatc ataaagtcgt cggcttttga gacgctgcta tcaacgtatt
     1081 ctttgccgag cacctcacgg cgcaattgca tgccgtcttc aaatagcttg tcggtttctt
     1141 gtttggctgt catcacggct ctccgggaat gtggttaggt tcaaggcagt atctgttggc
     1201 ggctaaaccg ctgtcaaggt gaagtggacg acataatcca gatttcactc tgataggcag
     1261 gctcgcccaa acacgttaca atcatcggtt gaaacaaaag attgcttgag gagcgttgcg
     1321 acggtgtggg tctttccacc cgccaggctc aggcgatctg gcatgcaggc aagttctttt
     1381 gcctcatcca aacggcgctc acccaatcct gaaacgacag tgattgcggt gggatcagcc
     1441 gattctgctg cgttactgtc agatgacgaa tggagctcat tgacatgaac gctgtgacag
     1501 acaaatttac tgactacgtt gttaccgata ttggcttggc cgagtggggt cagcgcgaaa
     1561 tcaaaatcgc tgaaaccgaa atgcctggtt tgatggcagt tcgcgaagag tacgaggcag
     1621 ttaagccttt gaagggcgcg cgcatcaccg gcagcctgca catgaccatc cagaccgcgg
     1681 tgctgattga aacgcttgag gctttgggtg cggaagtgcg ctgggcatct tgcaacatct
     1741 tttctacgca agaccacgcc gcggccgcca ttgcagccaa tggaacgccg gtgtttgcca
     1801 agaaaggcga gtcacttgtt gaatactggg aatacaccca tcgcattttt gattggcccg
     1861 atggtcactt tgccaacatg atcctcgacg atggtggcga cgccacgttg ttgctgcatc
     1921 tgggctcaaa agcagaaaaa gacatctccg tgcttgataa gcccagttca gaagaagaag
     1981 tggcgttgtt tgctgcgatt aaagatcaga tcaagcgtga cccaacctgg tactccacac
     2041 gcctggcaca cattcgaggc gtgacagaag aaaccaccac gggcgtgcat cgtctttatc
     2101 aaatgtccaa gcgtggcgaa ctggcgttcg ctgcaattaa cgtgaacgac gctgtgacca
     2161 agtccaagtt tgacaacctg tacggctgcc gcgagtcgct cgtcgatggt atcaagcgcg
     2221 ccaccgacgt gatagtcgct ggtaaagttg ccgtggtctg cggttacggt gacgtgggca
     2281 agggttcggc acaggcgctc gccgccctgc gtgcccaagt ctgggtgacg gaaatcgatc
     2341 ctatctgcgc attgcaggct gccatggaag gctacaaagt ggtgaccatg gaagaagctt
     2401 gcgacaaagc agacatcttc gtgaccgcca caggcaacta tcacgtgatc acgcgtgccc
     2461 atatggagcg catgaaggat caagccatcg tttgcaacat cggccacttc gacaacgaga
     2521 ttgatgtcgc tggcatcgaa gatctgaagt gggaagagat caagccacag gttgatcatg
     2581 tgatctttcc cgatggcaag cgcattatca tgctggcgca aggccgcttg gtcaacctcg
     2641 gttgtgccac gggccatccg tcgtttgtga tgtcttcatc cttcactaat caggttattg
     2701 ctcagatcga actctttact cgcaatgatg agtacaaggc tggtgacgtg tatgtcttgc
     2761 ccaagcatct cgacgagaaa gtggctcgcc tgcatttgaa gaagattggt gcgcatctaa
     2821 cggaaatgtc gccgcaacag gccgcttaca ttaacgttga gcaaaacggc ccttacaagc
     2881 cagagcacta ccgttattaa atctctttgt taataggcag ctgcggttgc caccgctttc
     2941 aggggcaatg ccatgatgtt gattgttgta tggattttga atgcggtggc actgctggcg
     3001 gtggcttttg tcctacctgg catcgtgatc ggcagtttct ggtcggcgat gctagcggcc
     3061 ttggtgttgg gcttgctcaa caccttggtc aagcctttac tcattctgtt gactctaccg
     3121 atcacggtgg tcacgctcgg gctattcctg ctcgtactta acgctttggt gttctggcta
     3181 gctggttctt tgttcaaagg gtttcaggtc gagggctttt ggtgggccgt ggcgggagcg
     3241 attttataca gcgtgatttc tagtctgttt tctatgctga tttttcaaca atgaccacac
     3301 atagcggcca agcctttagc cttgagttct ttccgccgcg cgacgaagcc gcgcgcgagc
     3361 gcttgacgca aagtgcgcag accttagctg ccatcgaacc aagttatgtc agtgtgacat
     3421 ttggcgccgg cggtacaacg cgcgacggca ccatggagac agtcgatcag cttaagtcca
     3481 tgggatttga tgccgcgcct cacttgtctt gcattgggtc aacgcgccaa cagctgcgag
     3541 acttgctgga ccactatcaa tcggctggga tcaagcgaat cgtggcgttg cgcggtgaca
     3601 tgccctcagg catggggtcg gttggtggtc aggacatgct gcgctatgcc gctgagctag
     3661 tggcgttgat ccgcgaacac agtggtgact ggtttcacat tgaagttggc gcctacccgg
     3721 aaatgcaccc tcaggccccc ggcccgcagg ctgatctgag gcattttgtt cagaaagtgc
     3781 aagccggtgc cgacagtgca attacccagt atttttttaa tgctgatgcg tatttcgatt
     3841 ttgtggatag agcgcacatg atgggggtga ccatccctat cgtgccaggc atcatgccga
     3901 ttaccaatta cacccaactc atgcgctttt ctgagatgtg tggcgctgaa gtgccgcgct
     3961 ggattcgctt gcgcttggcc gagtttggtg atgatcgagc atcgattcgt gcattcggag
     4021 cggacgtggt cacagagatg tgtcaaacgt tgcttgagaa ccaggtgccg ggcctgcatt
     4081 tctacacgct aaacaatgcc gcggcgacgc tggcgatctg gaacgggttg tcacgctgaa
     4141 gcgatacccc gccagcgcgg ctctccgggg tgccaagctg tcgatgtggc aatggcgtca
     4201 agcgggtggt catgcgactt ggcctcatac gacggatcta ggtcatgcaa attggcattg
     4261 tcccaagcca caccgatcag tgttgggtgg tggtttaagc ctgcaaagct tgccagcgtg
     4321 cggtcataaa accccttgcc atagcccatg cgttgcccct gtggcgtaaa gccaagtgtc
     4381 ggcactaaaa ccacatctgg cagcagtggg cgactcaact gcggctcttg gacaccaaac
     4441 gccacttcgc gcaaagtcat ccccggctcc caagcatgaa attgcaacgt ttgatcggtt
     4501 tcttgcatga ctgggagcac gaccacgatg tcctgctcat gccattgtcg atacaaggcg
     4561 gttaagtctg gctcatcggc tagtggccag aaccccgcca caatggacgg cggcggtgtg
     4621 ccggcctcgg cgcaacgggt tcgggtggtg gcgagccagg taaacaattt ggctctcatg
     4681 agcagaccgg cgcgctgccg ttgggcctcg ggcatatcgc ggcgggcttt ttttaactgt
     4741 gatcgaagaa ggtctgcgtt attctgtgtc ataagccaag taccgttgca accatttggg
     4801 ttcaaacgag tctattgaaa gggtcttcat cttgagccta atcatagacc gctgtcaaag
     4861 aggaattatc gtgctgcata aaggtatacg acaaatcgcc cttgccttgc cggcgctttt
     4921 gtttgcgccc tgggctgctt cttttaccta caacgtcgac acacccacgg cgcaggcggt
     4981 ggccaaggcc aaggaagcgg tcaatgcgcg gcagtggaac caattgccga cgttggttgc
     5041 acaaacccaa ggcgatgtcc tgcagattta tgcggactat tggctagccg aacgagaagt
     5101 ttgggcagcc aaggacgtca cgaatgtgcc ggttgccgag gcttttttac agcgctaccc
     5161 tggcagctac atggccgaca agttaaaagc caactggata ctggctgctg atgaagccgg
     5221 ttcctttaaa aaaatccgtg agcttgagga cttcctttgg tacaaccgcg aagttcggtg
     5281 tgccaagcta gaggcacgtc acatgaccgg gcagcgcgcc acttctgaac aagccatggc
     5341 ggtgtttcga cctggcaagg cttgctgggc gatgctttca cagtttgtgg ctgacgatgt
     5401 gatgacgcgc gatgacatgg tgatcttgtt gcaagatgca cttgaacgta atcacacaaa
     5461 aaccgcagac cgaatcgcta gcttactgtt tgatcgccaa acgctcggac aataccgcgc
     5521 catgatgaag tcccccgcgg ggtggttaaa gcaatacaag ggcaacgcca cgggtgatga
     5581 tgccgtcatc gctgccattg cactggtgcg ccaagggcgt agcaacccaa gtaccgccgc
     5641 ccgtgagctt gagcgtactt ggacggctcg cttgccggcg gccgcctcag gctgggcgtg
     5701 gtcgcaattg gcgtttcagt ctgcgctcga cctagaaacg cgcgctgacg cttggtatca
     5761 gatggctggc aatacccggt tgtctgaaac tggctacgct tggcgggtgc gtgcggcgct
     5821 gcgccaaccg attattaatt gggcatgggt gcagcaggcc attgaatgga tgccgcctga
     5881 gcaacaagcc gagattgatt ggcagtattg gcgtgccaga gccctggcgg cccaaggtca
     5941 gactggtcag gcacaagcga tcta
//
LOCUS       DATBNL010000508         1719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_105881, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000508 DATBNL010000000
VERSION     DATBNL010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105881"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..940)
                     /locus_tag="VIC30_08875"
     CDS             complement(<1..940)
                     /locus_tag="VIC30_08875"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012348810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY7804529.1"
                     /translation="MLNSTLATRGIAVAPHSLAAQSALDVMREGGNALEAMIAAAATI
                     AVVYPHMNSIGGDGFWVISRPGSAPGGIDAAGASAQAASIDWYANHGITGQIPFRGSM
                     AALTVAGTVSGWGKAHELGKAAGGRLPLSRLLEDAIYYADAGIAVTPSQSQLTAKKLA
                     ELVDQPGFAPTFLVDNQAPAGLSLLKQSVLAQTLKTIAKEGTESFYRGKLARQIAADL
                     QALGSPLSLADLNAHQARLVDPLQLKLGKNTLLNMQPPSQGLISLMILGIMNKLDGWA
                     DDPEGHRFIHAQVEATKQAVKIRDAHLTDPQWMKSPA"
     gene            complement(965..1621)
                     /locus_tag="VIC30_08880"
     CDS             complement(965..1621)
                     /locus_tag="VIC30_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011808292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4276 family protein"
                     /protein_id="HEY7804530.1"
                     /translation="MTRLYVLVEGQTEEAFINELVVPHYAALGIYFTPIVVQTSPGYR
                     GGLASFGKVKPQIQKLCKCDANAYVTTMFDLYGLPHDFPGKSNPTYRSLGNGRDKAQL
                     LESELGREIELPNFIPNLMVHEFETLLFVNLAAFTPWTDSDHCLAELHKVRRTTAPED
                     INDGPSTAPSKRIKAVMPRYQKTFHGPLIAIDIGLDAMRRECPHFDAWLAKIEALNRN
                     "
BASE COUNT          369 a          443 c          481 g          426 t
ORIGIN      
        1 gcgctggtga cttcatccat tgcgggtctg ttaagtgcgc atcgcggatc ttaacggcct
       61 gtttggtggc ttcgacttgc gcgtgtatga accggtgtcc ttcgggatca tcggcccagc
      121 catcaagttt gttcatgatg cccagaatca tgagtgagat cagtccctga gagggtggct
      181 gcatgtttag cagcgtgttc ttgccaagct tgagttgcag tggatcaaca agccttgcct
      241 gatgggcgtt cagatcagca agcgatagcg gtgaaccgag cgcttgcaag tcagccgcta
      301 tctgtcgggc aagcttgccg cgatagaagc tctcagtgcc ttctttagca atggtcttca
      361 gtgtttgggc cagtaccgat tgttttaaaa ggctcaagcc cgcaggcgcc tgattgtcaa
      421 ccagaaatgt cggtgcaaat ccaggttggt ctacgagttc tgccaacttc ttggctgtca
      481 gttgcgactg actaggtgtg acggcaatac cagcatctgc gtaataaatc gcgtcttcca
      541 gtagacgcga taaggggagc cgtccacctg cggccttgcc aagctcgtgg gccttgcccc
      601 agcctgatac ggtacctgcc accgtcaaag ccgccatgga accacgaaac gggatttggc
      661 cggtaatgcc atgattagcg taccagtcaa tggaagcagc ctgcgcactt gcgccggcgg
      721 cgtcgatacc gccaggggcg ctgccaggtc ggctaatgac ccagaatccg tcaccgccaa
      781 tcgagttcat gtgtggatag accacagcaa tcgtggcggc agcagcaatc atggcttcta
      841 gtgcattgcc gccttcgcgc atgacatcga gtgctgattg tgcggctagg ctgtgggggg
      901 cgacggcaat accacgggtg gcgagagttg aattcagcat gatggccttt gctttggtag
      961 cgtgttagtt ccggttcaac gcttcgattt tggcgagcca ggcatcgaag tgtgggcact
     1021 cgcgacgcat ggcgtctagt ccaatatcga tggcaatgag tggtccgtga aatgtctttt
     1081 gatagcgcgg catcactgct ttgatgcgtt ttgacggggc agtgctcggg ccgtcgttga
     1141 tatcttctgg cgcggttgtg cgtctgacct tgtgtagctc agccaagcaa tggtcactgt
     1201 ctgtccacgg tgtgaaagcc gctaagttga caaacagaag cgtctcaaac tcatggacca
     1261 tcaggttcgg gataaagttt ggcagctcga tttcgcgtcc cagttcggat tcgagcaact
     1321 gtgctttgtc ccttccattg cctaaagacc gatatgtcgg attcgacttg cctggaaagt
     1381 cgtggggtaa tccgtacaaa tcaaacattg ttgtaacgta cgcatttgca tcacacttgc
     1441 aaagtttttg tatttgcggc ttaaccttgc caaagcttgc gagtccaccc cgatatccag
     1501 ggctcgtttg gacgacaatc ggcgtgaaat agataccgag ggcagcgtag tgcggtacca
     1561 ctaactcatt gatgaacgcc tcttcggttt gaccttctac aagcacgtac aaacgggtca
     1621 tcgaccaggc ctcccaccca acagattctt cttccacaat tctccaaggc tgtagtcaca
     1681 aagccactca gacaatgttt gtgtgtcagg acgggaaaa
//
LOCUS       DATBNL010000509         3356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_115450, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000509 DATBNL010000000
VERSION     DATBNL010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115450"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(774..1979)
                     /locus_tag="VIC30_08885"
     CDS             complement(774..1979)
                     /locus_tag="VIC30_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011802909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804531.1"
                     /translation="MLIELSIENFRSIHARQTLSMVAASRLKKKENTINHPVTDENFP
                     ALLKAAAIYGPNASGKSTIFLALKLLSEMAQAKPSPETTELPVSAFRFDPVLRHEPSR
                     FEVHFAESGLRYTFELALTAKRIHQEKLTVYNKGRAHLLYDRTFDGSTEQYAFGKRLE
                     GGADLHGIWQKLTGPQVLFLSQSVANSSTELQQLRQPYLWLADLMFESQGMKASLHLT
                     QQLVSQEPAFGQEVADLLSDVDVPVTAIRTTRDEVTTTLKTTLTHKTVLGEVDFDLSE
                     ESDGTKNLMGFALPWFVFRHSGDGAKNKVLFVDELDSSLHPQVVQALIERHINSELGC
                     QLIFTTHDTHLMDTRLLRRDQIWFTERNAAGATDLRCAHDFEGRESEDLEKRYYEGRY
                     RALPFLRRG"
     gene            complement(2277..2765)
                     /locus_tag="VIC30_08890"
     CDS             complement(2277..2765)
                     /locus_tag="VIC30_08890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804532.1"
                     /translation="MHIQRIHQWRQRLKPRSGRGLLSPITRPLQCLCVMLSMALGTTL
                     LVHSATALAQTCPYDTRCIDNPYGAGSPYNPDSVNNPYGQYGSPYSNKSANNPYATDA
                     PKLYDSDGNYRGRLSANPYDPDPTSNPYGRYGSPYSPDSINNPYGAGSPYNTNPIYVV
                     PQ"
     gene            2916..>3356
                     /locus_tag="VIC30_08895"
     CDS             2916..>3356
                     /locus_tag="VIC30_08895"
                     /inference="COORDINATES: protein motif:HMM:NF028235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY7804533.1"
                     /translation="MINALISGKHKIDDGAQAPKGKRALNRAKLLRTGAELLSEQSYA
                     CTGVDHIIVKTGLTKGTFYHYFKSKEQFVLEVVDLYADYFNQKLDAYLLNDSQPPLER
                     LSAYVGDTIRTMKRDKFTRTCLIGNLSQELGGHDSALVDALKAAF"
BASE COUNT          797 a          767 c          899 g          893 t
ORIGIN      
        1 accgagatcc tgagttgcta cgcgacattc ggtttttaag gggcaggacc tacgaggcgt
       61 taaacagacg tgctcaggcg cgccgggatt ttgagcgggt ttatgccgaa gaccccgagt
      121 acgacgggat taggcaggcg ctggggttgt agtgcggaca ccttatcgaa ctggcaccgt
      181 ttgtccgaga cccatcaatc gtcttatcag ttgatgaata ggggtgctgg gattcatttc
      241 gtttacctca gcagcctgag ctaagcattt gtctgcatga ttaatcgcgt gaggcagctt
      301 aggtaggagt gttcgaaaca agccttgggt cgatcccttc ttgtattgag ccattcccgg
      361 tttagtttct aaagcttgca taacgctgcc cgctgtgtca aacggcgcac gggtgaaacc
      421 aaagtgcagt agcaaccaga attcaaagca cgggtaggat atcaaaagcg tgagtttgtc
      481 atgagatctt tgcaggtttg atgctggggc taggttcgtg tgctcatcgc gatcgactac
      541 acatacgact tcatcgaaag gtttgaggcg tctaatggcg ttctggacaa ttccctttgg
      601 atctgtgtac ccacaatgtg tgatttctac tttggcagat gctcggaaat aaatagcagc
      661 ttcctcaaga taggtcttgg ccgatctgct atcttcgcaa atgatcaaga tctgcggttg
      721 cggcttaaag cgaggcttgc ctcgcttgaa agacagagca cttcgaggca tgactaacct
      781 cgacgcagaa acggtaacgc acgataacgc ccctcgtaat atcgcttttc taggtcttca
      841 ctttctcgcc cctcaaaatc atgtgcacag cgcaaatcgg ttgcaccggc tgcgttgcgt
      901 tccgtaaacc atatttgatc gcgccgaagt aatcgagtgt ccatcaagtg tgtgtcatga
      961 gtcgtgaaga tcagctggca cccgagctca ctattaatgt gccgctcaat cagggcttgt
     1021 actacctgtg gatgcaggct gctgtcgagt tcgtctacaa atagcacttt attttttgcg
     1081 ccatcacccg aatgtcgaaa gacaaaccaa ggcagtgcaa atcccatcag gtttttggtg
     1141 ccgtctgact cttcgcttaa atcaaaatcg acttcaccaa gcacggtttt gtgcgtcagt
     1201 gtggtcttta atgtcgtagt tacctcatca cgggttgtgc gtattgcggt caccggtaca
     1261 tcaacatcac ttaataagtc agccacttcc tggccaaatg ctggttcttg tgagacgagc
     1321 tgttgcgtca gatgaaggct cgctttcatg ccttgcgact cgaacatgag gtcggctagc
     1381 cataggtagg gttggcgtaa ttgttgcaat tcagtgctgc tgttagcgac agattgcgac
     1441 aggaacaaaa cttgtggacc agtcagtttt tgccagatgc catgcaagtc cgcaccacct
     1501 tccaagcgtt tgccaaacgc gtattgttcg gttgatccat cgaacgttcg gtcgtaaagc
     1561 aaatgggccc ggcctttgtt gtagacggtt agtttttctt gatgaatacg tttcgccgtc
     1621 agtgcaagct cgaatgtata gcgcaaaccc gactcagcga agtgcacttc aaatcgggac
     1681 ggttcgtgtc gcagcacagg atcaaaccga aaagcggata caggtagttc cgtggtttcg
     1741 ggtgagggct tggcttgtgc catttcggac aatagtttga gcgctagaaa gatagtgctc
     1801 ttgcctgaag cgttgggtcc atagatggct gcggctttca agagtgcggg aaagttttcg
     1861 tcagtgacag gatgattgat ggtgttttct ttctttttta gtcgcgatgc tgcaaccatc
     1921 gacaaagtct gtcgagcatg gatggatctg aagttctcga tagacagttc tattagcacc
     1981 gctgctcacc aaggccatat aaaattaaaa aactgtaact gatggcatat tttatcaaaa
     2041 aataactata aatcgacaca aagtgcagaa aaactgcact ttagtaactt tcttcaattg
     2101 tctttaacgc aggtacacaa acgaatcgag cgctcgaacc tgcactgcag gtcatttggg
     2161 tgcctagggc atgcgctgcg caagacgatg aacgtagctg tgattttgcc agttcatcac
     2221 aagttcagag ctacatgtgg cgccatcctt tgcactttgt tgttttgcat gcttatttac
     2281 tgcggcacca cataaatggg gttggtgttg tagggactgc ctgcaccgta aggattgttg
     2341 atgctgtctg gcgaatacgg actgccgtat cgcccgtacg gatttgaggt ggggtccggg
     2401 tcgtagggat tggcacttaa ccttcctcga tagttgccat cgctgtcata gagcttaggg
     2461 gcgtccgtgg catatgggtt gttggcggac ttattgctgt agggactgcc atattgaccg
     2521 tacggattgt tcacgctatc cgggttgtag gggctgccgg cgccgtaggg attgtcaata
     2581 cagcgtgtgt cataaggaca ggtctgagcc aaagcggtgg cgctgtggac cagcaaggtg
     2641 gtaccaagtg ccatgctcag catcacgcac aagcattgca gtgggcgtgt aatcggtgat
     2701 aacaaaccac gccctgatct tggcttgagt cgttggcgcc attgatggat tcgctggatg
     2761 tgcatgaccg agtcctctgt gaatgtggat aaccagtgtg actgccatgg tgtctcatga
     2821 ggtgagacat gggagtcggc ataggtcagc ctggcatgtt aaatgtgggt aactaccgag
     2881 ttgtaatttc gcgtagaccg gtctaatcta aattcatgat caatgcacta atttccggca
     2941 agcacaaaat cgatgatggg gcgcaagcac ccaagggcaa gcgcgcgtta aaccgtgcga
     3001 agttattgcg cacaggcgcc gaactactca gcgagcaaag ctatgcgtgc acgggtgtgg
     3061 accacattat tgtaaagacc ggcttaacaa agggtacttt ctatcactac ttcaagagca
     3121 aagagcagtt tgtgcttgaa gtggttgatt tgtatgccga ctatttcaat caaaagcttg
     3181 atgcgtattt gttaaatgac tctcagccgc cacttgagcg attgtcggct tatgtcggtg
     3241 acaccatcag aaccatgaag cgtgacaagt tcacgcgaac ctgcttgatc ggcaatttga
     3301 gccaagagct cggcggtcat gactctgccc tagtcgatgc gcttaaagct gcgttt
//
LOCUS       DATBNL010000510         2297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_166055, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000510 DATBNL010000000
VERSION     DATBNL010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166055"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2297
                     /gene="carB"
                     /locus_tag="VIC30_08900"
     CDS             <1..>2297
                     /gene="carB"
                     /locus_tag="VIC30_08900"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY7804534.1"
                     /translation="IGAGPIIIGQACEFDYSGAQACKALKAEGYRTILVNSNPATIMT
                     DPETADVTYIEPITWQAVEKIIEAEKPDVLLPTMGGQTALNCALELEQHGVLEKHGVE
                     MIGANAHAIEKAEDRQKFKEAMSAIGLESAKSGVAHSMAEAWEVQRRIAKEAGSIGFP
                     MVIRPSFTLGGSGGGIAYNPEEFETICARGLEASPTNELLIEESLLGWKEYEMEVVRD
                     RADNCIIVCSIENLDPMGVHTGDSITVAPAQTLTDREYQIMRDASIAVLREIGVDTGG
                     SNVQFALNPDNGRLIVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDELRNEI
                     TGGATPASFEPTIDYVVTKIPRFAFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQK
                     AMRGLEIGVDGLNQMTVDRETIQVELGEPGPERIWYVGDAFAQGFTLEEVHQLTKIDW
                     WFLAQIQEIVNIELALEQRTLADLDRDTLFQLKRRGFSDRRLAFLLDTTEGEVRRLRH
                     QFNVRPVYKRVDTCAAEFATDTAYMYSTYEEECEAEPTDRRKIIVLGGGPNRIGQGIE
                     FDYCCVHAALALREDGFETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHKENP
                     VGMIVQYGGQTPLKLARSLEANGVPIIGTSPDSIDVAEDRERFQKLLHKLGLKQPENR
                     TARNQEEALSHAQDIGYPLVVRPSYVLGGRAMEIVHEQTDLERYMREAVKVSNDSPVL
                     LDRFLNHAIEVDVDCLCDGQRVFMGG"
BASE COUNT          532 a          583 c          664 g          518 t
ORIGIN      
        1 attggcgctg gccccatcat cattggccaa gcctgcgaat ttgattattc aggtgcccaa
       61 gcctgcaaag cgctaaaagc tgagggttac cgcaccatat tggtcaacag caatccggcc
      121 accatcatga ccgatccgga aacggctgat gtgacctata tcgagccgat tacctggcag
      181 gcggtagaaa aaatcatcga agctgaaaag cccgatgttt tgttgccgac catgggtggg
      241 caaactgcgc ttaattgcgc gctcgagctc gagcaacacg gggtgctaga aaagcacggc
      301 gttgagatga ttggcgccaa cgcccatgcc attgaaaaag ccgaagaccg gcagaaattc
      361 aaagaggcca tgtctgccat tgggctggag tctgccaaat cgggcgtggc tcacagcatg
      421 gccgaggctt gggaagtgca acgtcgcatt gccaaggagg cgggatcgat tggtttcccc
      481 atggtgatcc gaccaagctt cacgctcggt ggctcaggtg gtggcattgc ctacaaccct
      541 gaagagtttg agacgatttg cgcccgtggt cttgaagcct ctcccaccaa tgagctgctg
      601 atagaagagt cattgctcgg ctggaaagag tacgaaatgg aagtggtgcg cgatcgtgcc
      661 gacaactgca ttattgtgtg ttcgattgag aaccttgacc ccatgggtgt gcacacgggt
      721 gattccatca ccgtagcgcc agcacagacc ttgacggaca gggaatacca gatcatgcgt
      781 gatgcctcga tcgcggtgtt gcgtgaaatc ggggttgata ccggtggttc aaacgtgcag
      841 tttgcactga acccggataa cggtcgcttg atcgtgatcg aaatgaaccc gcgcgtctca
      901 cgctcgtcgg cattggcatc taaagcgacg ggattcccga ttgccaaggt ggcagcccga
      961 ctggccgtgg gatacacgct ggatgaacta agaaatgaga tcaccggtgg tgccacgcct
     1021 gcctcgtttg agcccacgat tgattatgtg gtcactaaaa tcccacgctt tgcgtttgag
     1081 aaattccctc aagccgatgc gcgtttgacc acgcagatga agtctgtcgg cgaggtgatg
     1141 gccattggtc gtacctttca agagtcgttg cagaaggcca tgcgtggtct cgagattggt
     1201 gttgatggtt tgaaccagat gaccgtcgat cgcgaaacca ttcaggttga actcggcgaa
     1261 cctggcccag agcgcatctg gtacgtgggt gacgccttcg cacaagggtt cacactcgaa
     1321 gaagtgcatc agttgaccaa gattgactgg tggtttctgg cgcagatcca ggaaatcgtc
     1381 aacattgagt tagcgcttga gcaacgcacg ctcgctgacc ttgatcgcga cacgctgttt
     1441 cagctcaagc gtcgcgggtt ttctgataga cgtctggcgt tcctactcga taccaccgaa
     1501 ggcgaagtgc gtcgcctgcg gcaccagttc aatgtgcgac ctgtctacaa acgtgttgat
     1561 acgtgcgcag ccgagtttgc cactgataca gcctacatgt attccacgta tgaagaggaa
     1621 tgcgaggcag agccgactga ccgtcgcaag atcattgtgc ttggtggtgg accaaaccgc
     1681 attggtcaag gcatcgagtt tgattactgc tgcgtgcatg ccgctttggc tttgcgcgaa
     1741 gacgggtttg agaccatcat ggtcaactgc aacccggaga cggtttcaac cgactacgac
     1801 acatcagatc gtctgtattt tgagccgctg accttagaag acgtgcttga gatcgtccac
     1861 aaagagaatc cggtgggcat gatcgtgcag tatggtgggc aaacgccact gaagttggca
     1921 cgttcacttg aagccaacgg tgtacccatc attggtacaa gcccggattc gattgatgtg
     1981 gccgaagacc gtgagcgttt tcaaaagctc ttgcacaagc ttgggctcaa gcaacctgag
     2041 aaccgcacgg cacgtaacca agaggaagcc ctctcgcatg cccaagacat tggttatccg
     2101 ttggtggtgc gtccaagcta tgtcttgggt ggccgggcca tggaaatcgt gcacgagcag
     2161 actgaccttg agcgctacat gcgcgaggcc gtcaaagtca gtaacgattc gcctgtttta
     2221 ttggatcgtt tcttaaatca cgccattgaa gtcgatgtcg attgcctgtg tgacggccag
     2281 cgtgtgttca tgggcgg
//
LOCUS       DATBNL010000511         2197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_195074, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000511 DATBNL010000000
VERSION     DATBNL010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195074"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VIC30_08905"
     CDS             complement(<1..823)
                     /locus_tag="VIC30_08905"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY7804535.1"
                     /translation="MDTSWVWLWVPVTILAAALQTGRNAIQKGLTEQLGTLGATQVRF
                     VFGLPFAGVFLMHALWLTDSDLPSVNWSFLAFVLTGALAQIAATALMLAAMRLRDFVV
                     VTVWTKTEPVQLALVGFLVLGDTLSLWAVVAISTATLGVVWMAYRPRVSGAPHQTTNW
                     RPIVLGLAAAGAFAVAAVGFRGAILELPQGNFLVRASWTLVCGLLIQATALALWLAWR
                     EPGVWQRCLNAWRVSLWGGFLGAAASQGWFVGFALTSAANVRTLALVEVFFAQLLA"
     gene            complement(961..>2197)
                     /gene="groL"
                     /locus_tag="VIC30_08910"
     CDS             complement(961..>2197)
                     /gene="groL"
                     /locus_tag="VIC30_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938027.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY7804536.1"
                     /translation="KIKQVASISANNDETIGELIAQAFKKVGKEGVITVEDGKSLENE
                     LDVVEGMQFDRGYLSPYFINSPEKQVSALEDPYVLIFDKKISNIRDLLPVLEQVAKTS
                     RPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTVIS
                     EETGLSLEKATIEELGQAKRIEVAKENTTIIDGAGDGKSIEARVKQIRAQIEEATSDY
                     DREKLRERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVA
                     LVRARAAVEKVKGTNVDQEAGIKLVLRAVEEPLRTIVANAGDEPSVVVNTVVAGQGNY
                     GFNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTTEVAVCEIAEDKPAAGGM
                     PPGGMGDMGGMGGMGGMGF"
BASE COUNT          526 a          679 c          516 g          476 t
ORIGIN      
        1 tggccagtaa ctgcgcaaaa aatacctcca ctaatgctag cgtcctgaca ttagccgcac
       61 tcgttaacgc aaaccccaca aaccaaccct gggatgcggc ggcacctaaa aaaccacccc
      121 acaacgatac gcgccaagca tttaagcacc gttgccagac cccgggctcg cgccacgcta
      181 accaaagtgc tagcgccgtg gcctgaatca acagaccaca taccagcgtc caagatgccc
      241 tgactaggaa attgccttgt ggcagctcta gaattgcgcc gcgaaacccc acagctgcca
      301 ctgcaaaagc gccagccgcc gccaacccca acacgatcgg gcgccaattt gtcgtttggt
      361 gaggcgcgcc tgacacacga ggtcgatatg ccatccaaac cacgcctaag gtggctgtac
      421 taatcgcaac caccgcccac aggctcaagg tatcaccaag caccagaaac ccaacgagcg
      481 cgagttggac tggttcggtt ttagtccaaa cggtcacgac aacaaagtca cgcagtctca
      541 tggcagccaa catcagcgcc gtggcagcaa tctgggctaa cgctccggtc aacacaaatg
      601 ccagaaatga ccaattcaca ctaggcaaat cgctgtcggt taaccaaagc gcgtgcatca
      661 gaaagacacc agcgaagggc aaaccaaaaa caaaccgcac ctgggttgcc ccaagcgtgc
      721 ccaattgctc ggtcagacct ttttgaatcg cattgcgacc cgtctgcagc gccgcagcca
      781 gtatcgtcac tggcacccac agccataccc aacttgtgtc cacctcgccc ccagaaaacg
      841 catgcttatt atgtcagttg cacactttgc aatgcgctgc tctgacagcg agtgtatgca
      901 aaaaccccgg tgtccgttag gacaccgggg tttagggtaa aaacagcgat tagcgtgaac
      961 ttagaagccc ataccgccca tgccgcccat accacccatg tcacccatac cgccaggtgg
     1021 cataccacca gcagctggct tgtcttccgc gatttcgcaa acagcgactt cggtggtcaa
     1081 caacaagctg gcaacagatg cagcgttttg cagtgctgtg cgggtcacct tggtaggatc
     1141 aagcacgccc tgctcgacga ggtcaccgta ctcaccggtg gctgcgttaa agccataatt
     1201 gccctgacca gcaacaaccg tgttcacaac cacgcttggc tcgtcaccag cattggccac
     1261 gatggtgcgc aggggctctt caaccgcacg caacaccaat ttgatcccag cttcctgatc
     1321 aacgttggtg cctttgactt tctcaaccgc agcacgtgca cgaaccagtg ccacgccacc
     1381 gccaggaaca atgccttctt caacggctgc gcgcgttgcg tgcagtgcgt cttcgacacg
     1441 tgcctttttc tctttcattt ccacttcggt ggcagcgcca acacggatca cggcaacacc
     1501 gccagccaac ttggctacac gctctcgcag tttctcacgg tcgtagtctg atgtggcttc
     1561 ttcaatctgg gcacggatct gcttgacacg tgcttcgatg gatttgccgt caccagcgcc
     1621 atcgatgatg gtggtgttct ctttggccac ttcgatacgc ttggcctggc cgagctcttc
     1681 gattgttgct ttttccagtg acaggccggt ctcttcagag atcacggtac caccggtcaa
     1741 gatagcaata tcttcgagca tggctttgcg acgatcaccg aaaccaggcg ccttaacggc
     1801 ggtggtcttc aagatgccgc ggatgttgtt caccaccagc gttgccagtg cttcaccttc
     1861 gacatcttca gcgatgatca acaacggacg gctggtcttg gcgacctgct caagtacggg
     1921 caacaggtca cggatgttgc tgattttctt gtcaaaaatc aggacatacg gatcctcaag
     1981 tgccgacact tgcttttctg ggctattgat gaagtaaggc gagagatagc cgcggtcaaa
     2041 ctgcatgccc tcaacgacgt cgagttcgtt ttctagggac ttgccgtctt caacggtgat
     2101 aacaccttct ttacccactt ttttaaatgc ctgggctatt aattcaccaa tcgtttcatc
     2161 gttatttgcc gaaattgatg caacttgttt aatttta
//
LOCUS       DATBNL010000512         1709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_45935, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000512 DATBNL010000000
VERSION     DATBNL010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45935"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..381)
                     /locus_tag="VIC30_08915"
     CDS             complement(100..381)
                     /locus_tag="VIC30_08915"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7804537.1"
                     /translation="MRLKISNVKDLGAALRAARKSSGVRLDDLASFAGVSKQFVSDLE
                     NGKETIRLGLALKVLDEIGLHLKVDLPEKAIERWETLTQVRTTDDHQKD"
     gene            complement(451..660)
                     /locus_tag="VIC30_08920"
     CDS             complement(451..660)
                     /locus_tag="VIC30_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804538.1"
                     /translation="MASIVRNHERPTPEVFWQYAHRLTESDDRQRFVQLLSEMLGQLH
                     EYTAACYRLRPSEVVAWWQAVKDNS"
     gene            complement(967..1709)
                     /locus_tag="VIC30_08925"
                     /pseudo
     CDS             complement(967..1709)
                     /locus_tag="VIC30_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006029867.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          367 a          480 c          398 g          464 t
ORIGIN      
        1 gacccacgat gggtcatatt taaatgacca aacatcctga ttttccgata gctcaccgac
       61 caatcgttcg ttgatgtata cacaaagctg ccgcatgaat cagtcctttt ggtggtcgtc
      121 tgtcgttcgc acctgagtta atgtctccca tctttcgatg gctttctcgg gtaggtcaac
      181 ttttaggtgc aagccaattt cgtctagcac tttcaacgcc aagccaagtc ttatagtctc
      241 tttgccgttc tcaaggtcag acacgaactg tttactcacg ccagcaaatg aagccagatc
      301 atcgaggcgc acaccagaac ttttacgcgc cgcacgtagc gccgcgccca agtcttttac
      361 attcgagatt tttagtcgca tttcttttat tcctacgatt gcaggaattt tagcttatta
      421 acgaccaaaa aatagataat tcctacgatc tcaggaatta tctttgaccg cttgccacca
      481 ggctaccacc tcactcgggc gcaagcgata gcacgcagca gtgtattcat gcaactggcc
      541 aagcatctcg gacagcaact gcacaaaccg ctggcgatca tcggactcgg ttaatcggtg
      601 agcgtattgc caaaaaacct caggtgtggg tcgctcgtgg ttgcgcacga tgctggccac
      661 tgcctgcctg agttgggttt atatggtcac caccccgttt gccaagatct ttgtcggtgt
      721 gctgggttag gtaggctgca gttttatatc cggcctgttg tgcaggtcga tacctgctgg
      781 ccctgatgga atccgctgac tcgcgcctca tttccctaaa ggactctcgg tccaaggtct
      841 gaaccaggct tagcgggtca cggtctaacc tgtttgccat cacactttca tcgatcctgc
      901 gcaacctttg cggcaacaac tccttttatc tatcagtgat tcatcattcc tgtttgcttg
      961 tcagccctac acgggttggc tcacaaacgc cttctggtac tccctgtcat gagcaagcaa
     1021 cgcccatacc gttcttgcca tcttgttggc cagtgccaca accgccacgt taattggtcg
     1081 gcgcttcagt aattcggttg cccaaggccc cgggtccgtt gatcgtgtca atacagatcg
     1141 ggcgccattg atgaacaagg ttcgaacgta gacctcacca cgcttgctga tacctagtag
     1201 tttggtcttg ccaccagtgc caacttgtcc gggcacgaga cccagatatg cggcatattc
     1261 tctacctgac ttaaaggctt tgggatcacc catcacggca accgctgctg tggccgtcaa
     1321 tgggccaata cccggaattt cggcaatgcg acggcaggct tcttcttgct tgcgccaaag
     1381 gttaatccgt tgctcaatag tattaatttc ttcgtcgagt ttgccaatgc gagcccattg
     1441 atctcgtagc gtgtcgatgg ccatcgctgg cagacgttca gataatctgg ccaatgcctc
     1501 tgcaatgcct ttcagcaggt tggctttgcc ttgtggcatc acctcgccgt actcggttaa
     1561 taaccctcgc agacaattga tccgtgccgt gcgaaacttc acgagttggc ttctcatgca
     1621 aagccaacat cgcttgttgg tcttcggtct taacggcggc ggacctgaca tgtggctgtt
     1681 gtacagcagt ccaaatggct ctcgcatca
//
LOCUS       DATBNL010000513         3798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_16336, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000513 DATBNL010000000
VERSION     DATBNL010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3798
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16336"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VIC30_08930"
     CDS             <1..473
                     /locus_tag="VIC30_08930"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEY7804539.1"
                     /translation="IDTLVKSLVQASEQHDRIKLSCESVPVIQSDSYLIKIVLANLLD
                     NATKYAVKGSMVDVVVTAGVTARVTAAVTAPGTATDSSSRISVRVSNEIESDAIPNPE
                     RLFERYYRHESARHIRGSGLGLPLSRSVCDLLGARIVCRLQDDRIEFEVIFEKT"
     gene            460..1167
                     /locus_tag="VIC30_08935"
     CDS             460..1167
                     /locus_tag="VIC30_08935"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7804540.1"
                     /translation="MKKPDRIAIVEDDTLLREELTYFFSNSGLVTHEANSYQTLLDVL
                     QNHTVDVVVLDLNLPGMNGYEIAQQLKRLSPSTGIVMLTARAAKQDKLRGYDAGADIY
                     FAKPVDPDELLAAVRSLAARVRGQVESLHAFKLYMQQLTLSKETEHHSPLSAVEALIL
                     KALAFSPEQTLDISGLQNVLEDRFPDRPFTKRALENLLSRLRKKLLGCFEGEADPIRA
                     IRGVGYQLTWTVEVVEG"
     gene            1305..1505
                     /locus_tag="VIC30_08940"
     CDS             1305..1505
                     /locus_tag="VIC30_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013122056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEY7804541.1"
                     /translation="MQTVRLLLNVRLPEAAHEVEIRVKGQGDILVSLDQSWYSFFLGS
                     PRVSDDFLPARASQHQAQREGL"
     gene            1712..2974
                     /locus_tag="VIC30_08945"
     CDS             1712..2974
                     /locus_tag="VIC30_08945"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804542.1"
                     /translation="MFERTLLESVLALSQMFPVVMVTGPRQVGKSTLLQTCASDQSVP
                     RRYVTLDDLNARDLAVNDPALFLQQWPAPVIIDEIQYAPGLLSAIKVEVDRHKRPGMY
                     WLTGSQKFALMKGITESLAGRVGLLDLLGLSQAEIHGRGAASKPFVSGVLSALEADRL
                     APPILSNDSKPSRQATLQSVYEQIWLGSFPQLNELGSQARDAFYRSYVQTYIERDVQD
                     VLRVTDHITFNRFLGIVASNTGQLLSYATLARDLGVDNKTIKSWLSVLETSGLVYLLQ
                     PYFSNLNKRIVKAPKLYFLDTGLAAYLTRWPDPESLQSGNLSGAIFETWVVSEVLKSY
                     WHNGKEAPLYYYRDSDGREIDLLIESGDTLYPIEIKRTATPTRQAYKQFHVIETLGKH
                     QGHGAVVCLIESPLRLTESVTAVPAMRL"
     gene            complement(3125..3331)
                     /locus_tag="VIC30_08950"
     CDS             complement(3125..3331)
                     /locus_tag="VIC30_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804543.1"
                     /translation="MADILATGEVPTPYIAHVAYLLDEAPPIVLVRAVESAAHLKKIP
                     ARQIWKNIAHIARDFDLSTQEVFA"
     gene            complement(3455..3619)
                     /locus_tag="VIC30_08955"
                     /pseudo
     CDS             complement(3455..3619)
                     /locus_tag="VIC30_08955"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
BASE COUNT          845 a          911 c         1048 g          994 t
ORIGIN      
        1 gaatcgacac attggttaaa agtcttgttc aagcatcaga gcagcatgac cgaatcaaat
       61 tgtcttgtga gtcagtccca gtcattcaaa gcgattcgta tctcatcaag atcgtgttgg
      121 ccaacttact ggataacgcc accaaatatg cggttaaagg ctcgatggtc gatgtggtgg
      181 tgaccgccgg agtgacggct agggtaaccg cagcggtcac cgccccgggt accgccacag
      241 atagcagcag tcgtatctca gtccgtgtga gcaatgagat tgagtctgat gcgatcccca
      301 atcctgaaag actgtttgag cgttactacc gacatgagtc tgccagacac atacgcgggt
      361 caggtctggg cttgccgctg agtcgctcgg tatgcgactt gcttggtgct cggatcgtct
      421 gccgtttgca agatgatcgg attgagtttg aggtgatctt tgaaaaaacc tgatcgaatc
      481 gccattgttg aagatgacac gctgctgcgt gaagagttga cgtatttctt tagcaactca
      541 ggcttggtaa cccatgaggc caacagttac caaacactgc ttgatgtctt acagaaccat
      601 acggtcgatg tggtggtgct cgacttgaac ttgcccggca tgaatggcta tgagattgcg
      661 cagcaactca aacgcctgtc accatcgacc ggtatcgtta tgttgactgc gcgtgccgcc
      721 aaacaagata agctgcgtgg ctatgatgct ggcgctgata tttactttgc caaaccggtt
      781 gaccctgatg agcttctggc agccgttcgt agtctcgccg ctcgggttcg agggcaggtt
      841 gaaagtctgc atgcttttaa gctttacatg cagcagctga ccttgagcaa agagactgag
      901 caccattcgc cgctgtctgc agttgaagcg ctgattctca aagccttggc gtttagcccg
      961 gagcagacgc tcgacatcag tggcctacaa aacgtgctcg aagatcgatt cccagaccgt
     1021 ccctttacca agcgtgccct agaaaacctg cttagccgtc tgcgcaagaa gctgttgggg
     1081 tgttttgagg gggaggccga cccgattcgc gccattcgcg gtgtggggta tcagctgacc
     1141 tggacggtgg aagtggtgga ggggtgatgg aaaggcagat ggtggtgagt gctatgttcc
     1201 actgaggttg agttgtacta gcccctatag gcagctttct ataattgctt tttagtttgt
     1261 ttatgcaagc tgctatgccg aacgacgcgt ttatagatta agccatgcaa actgttcgct
     1321 tgttgctaaa tgtccggttg cccgaggctg cacacgaggt agaaatacgc gtcaagggtc
     1381 aaggggacat cttggtttct cttgatcaaa gctggtacag cttctttttg ggtagcccgc
     1441 gggtgagcga tgattttctg cctgcacgcg cgtcgcaaca ccaagcgcag cgggagggcc
     1501 tttgatgatg ctgcattgcc ttactttgca cgcatgttgc taagagttgg tattggtgac
     1561 caacaacatc tctgaattta agcgggtgcc tgcgctagaa gtggaaaact gggtggccta
     1621 gcaacgaact gttatttata ttcgcaggtt ggctcgtttc aatcaatgat ttctgttaaa
     1681 ttggattcag attcccacat agcagaaaat tatgtttgaa cgaaccttgc tcgagtcggt
     1741 gctggcgctc tcccagatgt ttcccgtcgt gatggtcact ggacctaggc aggttggcaa
     1801 gtcgacgctg ctgcaaacct gcgccagtga tcaatcagtg cctaggcgct atgtcacgct
     1861 cgatgatttg aatgctcggg atttagcggt taacgatcct gctttattcc tgcagcaatg
     1921 gccggcacct gtgatcattg atgagattca gtatgcaccg ggactgttgt cagcaatcaa
     1981 agttgaggtc gaccgccata agcgacccgg gatgtactgg ttaaccggtt ctcagaagtt
     2041 tgctttgatg aagggcatca ccgagagcct ggctggcagg gtggggctac tggatttgct
     2101 tgggctatcg caggctgaaa tccatgggcg tggagccgcc tcaaaaccat tcgtgtcagg
     2161 tgtattgtca gcgcttgagg ctgacaggct agcgccacca atcttgtcaa acgattctaa
     2221 gccgtcgcgc caagccacct tgcaaagtgt gtacgagcag atttggcttg ggtcatttcc
     2281 gcagctaaac gagctcggta gccaagcccg cgacgcattc tatcgttcct atgtgcagac
     2341 ctacattgaa cgggatgtgc aagacgtgct gcgagtcact gaccacatta cgtttaaccg
     2401 ctttctcggg atcgtggcgt ccaacactgg gcagcttctg agctatgcga cgctagccag
     2461 agatttaggt gttgacaata aaaccattaa aagctggctg tctgtgcttg aaacctcagg
     2521 cctggtgtat ctgctgcagc cgtacttcag caatctgaac aagcggattg tcaaggcacc
     2581 gaagctgtac tttctggata cgggattagc agcgtacctg acccgttggc cagatcccga
     2641 gtcgctgcag tcaggcaatt tgtctggcgc gatatttgag acgtgggtgg tcagcgaagt
     2701 gctcaagtcc tattggcata acggtaaaga agcaccgctg tattactacc gcgattcgga
     2761 tggccgcgag atagatctgc tgattgaatc gggcgacacc ttgtacccga ttgaaatcaa
     2821 gcgtaccgcc acaccaaccc gacaggctta taaacagttc catgtgattg aaaccctggg
     2881 caagcatcaa gggcatggcg cggttgtttg tctcatcgaa tcgccgttaa ggctaacgga
     2941 gtcagtgacg gcggtgccgg cgatgcgttt gtgatgggtg tttctgatgt gtcgttgtgg
     3001 tgtgaggtct tgactgcctc cctgttctga agaacggggg tttacgcgct atccggtaaa
     3061 aacagagccc gttctaaaag cggtttccat gggccagctg gaatcgtgtg taccggtatt
     3121 tctgtcatgc aaatacttcc tgtgtagata agtcgaaatc tctggcaatg tgtgcaatgt
     3181 tcttccagat ttgacgggca gggatttttt taaggtgtgc tgctgattcg acagctctga
     3241 ctagcacgat cggtggcgct tcatccaaga gataggcgac atgcgctatg tagggcgtag
     3301 gcacctcacc cgtggctaat atgtcggcca agatctgggg ttttaattca ggcgtgtaac
     3361 ttacgctggc tgttttcgca gcggcccaca gtccagtttg cttgtggtga ggtgtgggct
     3421 ttggggcagt aagctccaac cctagaattg cgagcgtttg cgccagtcta ttgaagccaa
     3481 gttcatgtag cgttcctttc tccaggctca caatcgtttg tcgcgacaag tcgcaacaat
     3541 gcgccaattt gctctgcgaa agcccaaggg cttgcctgcg ctgtcgaatg acgctgccga
     3601 tttcatttaa ataaatcata gcaataaaat gtcaaatatt ttagacgttt tataaggcag
     3661 aaccgagtgc tgtcaatctt ctttcatttt gtcgcattcg acacattcga cgcctcattg
     3721 cgcgcgctgc tgatcccgca ctgttattcc gcttttgtct ggctaacggt acccttcatt
     3781 gcgtcacgcc ggcgtagt
//
LOCUS       DATBNL010000514         1724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_36091, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000514 DATBNL010000000
VERSION     DATBNL010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36091"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VIC30_08960"
     CDS             <1..900
                     /locus_tag="VIC30_08960"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7804544.1"
                     /translation="NKIRTPRVTFNQLRTVEAVARLQSVTHAARELHLTQPTVSAQLQ
                     DLQMALETPLFEPVGRGIRPTPAADLLRETALDLFARWQRFQEDLLALQGLERGTLRI
                     AGVTTTEYFIAQWLADYSVNHPGIDIDLAVDNRDAVVNRLINDDIEIAVMMMPPAQLS
                     LASVKVMHNQLVLIGAADHPWAQQKRLPRQALNHQPLLMREHGSGTRLATEAYLREHD
                     LQPVVRATLGSNEAIKHAVATGLGLAVVSEHVLPKKPSSEGIAVLSVVGFPLKRQWQL
                     VWRKDRKMSLAAQTFIDEVSGRY"
     gene            1016..1384
                     /locus_tag="VIC30_08965"
     CDS             1016..1384
                     /locus_tag="VIC30_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804545.1"
                     /translation="MKDSKGVNEADIGKRIGNIGDLPDSVRSQLEITQVDDLEQKVLS
                     TLTQRFDGVATIDEVIVGLYRVFGYETKARQEVIDKLTKMTDSGLLKAHEDKKDVFEV
                     TEAGRAIRTPLAEVPLSARM"
     gene            complement(1420..>1724)
                     /locus_tag="VIC30_08970"
     CDS             complement(1420..>1724)
                     /locus_tag="VIC30_08970"
                     /inference="COORDINATES: protein motif:HMM:NF024996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY7804546.1"
                     /translation="ITGDGDILFDSGFNHDSYLLGLSWAINDRTQFMTSWQMMKPKGR
                     LAGVAQAASQQIVGAAMTYNLSPRTTAYVWASYGDNFEMVSGAKTSVIGTGIQTLF"
BASE COUNT          420 a          413 c          502 g          389 t
ORIGIN      
        1 aataagattc gcacaccacg cgttaccttc aaccagctta gaaccgtcga ggcagtggct
       61 cggttgcagt ctgtgacgca tgcggcacgg gagctgcact taacgcagcc aacggtatcg
      121 gcgcaactac aagaccttca gatggcgctc gagaccccat tgtttgaacc tgtggggcgc
      181 ggtattcgac caacgccggc ggctgatttg ttgcgtgaga cggcccttga tttgtttgcc
      241 cgctggcaac gattccagga agacttgctg gctttgcaag ggcttgagcg tggcacatta
      301 cgtattgctg gagtgaccac cactgagtac tttattgctc agtggttagc cgattacagc
      361 gtcaatcatc caggcatcga tatcgatctg gccgttgata accgggatgc agtcgtaaat
      421 cgattgatca atgatgacat tgagattgcg gtgatgatga tgcccccggc gcaactgtcg
      481 ttagctagcg tgaaagtgat gcataaccaa ttggtgctaa taggtgccgc ggatcatcca
      541 tgggcacaac aaaagcgttt gcccagacag gcgctgaacc accagccctt gctgatgcgc
      601 gagcacggct cgggtacacg actggccact gaagcgtatt tgcgcgaaca tgacttacaa
      661 ccagtggttc gcgcaacact tggcagcaat gaggccatca agcatgccgt ggccacgggc
      721 ttagggttag cagtggtgtc tgaacatgta ttgcctaaaa aaccgtctag tgaaggcatt
      781 gcggttttgt ctgtggtggg atttccgctt aagcgacagt ggcagttggt gtggcgcaag
      841 gacagaaaga tgtcgcttgc ggcgcagacc tttatcgatg aagtcagtgg tcggtattag
      901 tggtggcgtg gctcaaccaa accccagtag caactgtaca gggatttaag tgtgccttca
      961 gctacagtag gctatacatg gacatcgcag taagaggatg atcgggagga aggtaatgaa
     1021 agacagcaaa ggcgtgaatg aggccgatat tggtaaacgc atcggcaaca tcggtgactt
     1081 acccgactct gtgagaagtc agctcgaaat cacgcaggtc gacgaccttg agcaaaaggt
     1141 gctcagtacg ttgactcagc ggtttgacgg cgtggcgacc attgatgaag tgatcgtcgg
     1201 tttgtatcgg gttttcgggt atgaaaccaa ggcgcgacaa gaggtgatcg acaaactcac
     1261 caagatgact gactcaggct tgctcaaggc gcacgaagat aagaaagacg tctttgaagt
     1321 gaccgaagcc ggccgcgcca ttcgaacgcc gttggccgaa gttcctttgt cagcgcgcat
     1381 gtagccatgg gccaagccgc taacgtggcc caagtggtct caaaagagtg tttgtatgcc
     1441 ggtaccgatg accgatgtct tggcgccaga gaccatctcg aaattgtcgc cataggaagc
     1501 ccatacataa gcggtggttc tgggtgacaa gttgtaggtc atggcagcac cgacaatctg
     1561 ctgtgaggcg gcttgtgcca caccagctag cctgcctttg ggtttcatca tttgccacga
     1621 tgtcatgaac tgggtgcggt cattgatggc ccaactcaaa ccgagtaagt aagagtcgtg
     1681 gttaaagcct gagtcaaata ggatatcgcc atcacctgtg atcg
//
LOCUS       DATBNL010000515         1512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_76014, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000515 DATBNL010000000
VERSION     DATBNL010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76014"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1083)
                     /locus_tag="VIC30_08975"
     CDS             complement(<1..1083)
                     /locus_tag="VIC30_08975"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804547.1"
                     /translation="MTSTRLTRPKPDLNQTRQWVDAVMLEAYAQVKIRNQHIISTSWL
                     LTKPYPDPVTNHQTHALNLKALLALMLSVAMVTIDISLTSTAVPAIASGLGVSPAQTI
                     WVINIYYLTVVASLLPLGALGEIIGHRRVFLVGLGIFALGALASGLSESLTALMGARG
                     LQGIGSAAVSATTPALIKTLYPSDRLGRGLGLYAMVVGVAFTAGPTMVSGVLSVANWP
                     WLYLGTLPFILLAMALAIKGVPNTDRADRAFDPVAALLCALLFAALLTALSSLGHLKP
                     LALMAGLIAAAVFGYSLARRESGKQAPILAIDLFRIRLFALSSMTSITAFVVQALVFV
                     VLPLLFTINLGFSEVQAGLLITPWPAA"
     gene            1163..>1512
                     /locus_tag="VIC30_08980"
     CDS             1163..>1512
                     /locus_tag="VIC30_08980"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: protein motif:HMM:NF014233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEY7804548.1"
                     /translation="MSVSSTIELTGVPVKATIGLFPTGESDPYEHQLDLKLVIDSSLV
                     LIQEDGMQHVFDYDPLLEQIHAISQNKHYETQEMLASRIVQCCASFKHIQSVEVCLKK
                     YRSNGNGGTICGTIG"
BASE COUNT          372 a          392 c          426 g          322 t
ORIGIN      
        1 tgccgctggc cacggcgtga tcagtaagcc tgcctgcacc tcactgaacc ctaggttgat
       61 ggtgaacaac agtggtaaca ccacgaacac caaggcttga acaacgaagg ccgtgatcga
      121 agtcatcgat gacaaggcaa agagccgtat gcgaaacagg tcaatcgcca aaataggtgc
      181 ttgcttgcca gactcacgcc gtgccaagct gtaaccaaat acagccgcag cgataagtcc
      241 tgccatcagt gcaagcggtt ttaagtggcc caggctagag agagcggtca acagcgcagc
      301 aaataacagt gcgcaaagta aggcggcaac aggatcaaac gcacggtcag cacgatcggt
      361 gttgggcacg cctttgatgg ccaatgccat ggccagaagg atgaacggca aggtgcccag
      421 atacagccac ggccagttag ccaccgaaag tacgcccgac accatggtcg ggccggctgt
      481 aaacgccaca cccacgacca tcgcgtagag ccctagaccg cggccaagtc tgtcggacgg
      541 gtagagggtt ttgatcaacg caggggtcgt ggccgacacg gctgctgacc caatgccttg
      601 cagcccgcgc gcgcccatca gagcagttaa cgattctgat agcccactgg ccaaggcgcc
      661 aagcgcaaat atccccagtc cgacgaggaa tacgcgccga tggccaatga tctcgccaag
      721 cgcaccgagc ggcaatagcg acgccacgac tgtcaggtag tagatgttga tgacccagat
      781 ggtttgtgct ggactgacgc ctaaaccact ggcaatggcc ggcaccgccg tgctggttag
      841 cgaaatgtcg atggtgacca tggccacgct cagcatgaga gccagcagtg cttttagatt
      901 gagcgcatgc gtttggtggt tggtcactgg gtcgggatac ggtttggtca acagccatga
      961 tgtgctgatg atgtgctggt ttcttatttt gacttgcgca taagcctcta acattaccgc
     1021 atcgacccac tgtcgtgttt ggttcaggtc aggcttgggt ctggtgagcc tggtgctggt
     1081 caagtgaccg gtcttaaact agactgatag tgttcgtttg tgtaggttcg tacacaatat
     1141 atttgcaatt ctggggttag atgtgtcagt tagcagcacc attgaattaa ccggcgtgcc
     1201 ggtcaaagcc acgattggct tattccccac tggcgagtcg gatccctatg aacaccagct
     1261 tgacctaaag ctcgtgatcg attcgagctt ggtgttgatt caagaagatg gcatgcagca
     1321 tgtgtttgat tatgatcctt tgctcgaaca gattcatgcc atctctcaga acaagcatta
     1381 cgaaacccag gaaatgctgg caagccggat tgtgcaatgc tgcgcgagtt ttaagcacat
     1441 tcagtctgtt gaggtctgct taaagaagta ccgatccaat ggcaatggcg gcaccatatg
     1501 cggcacgatt gg
//
LOCUS       DATBNL010000516         1761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_86164, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000516 DATBNL010000000
VERSION     DATBNL010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86164"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1653)
                     /locus_tag="VIC30_08985"
     CDS             complement(<1..1653)
                     /locus_tag="VIC30_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Orn/Lys/Arg decarboxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7804549.1"
                     /translation="MKFRFPIYIIDEDFRSENASGLGVRALASAIEAEGMEVIGVTSY
                     GDLSSFAQQQSRASAFILSIDDEDFDIDVAVDHSSAIQKLRSFIGELRFRNAEIPIYL
                     YGETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREAKSYVDGLAPPFFKELVEY
                     AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPI
                     AESELNAARIFHADHCFFVTNGTSTSNKVVWHANVATDDIVVVDRNCHKSILHAITMT
                     GAIPVFLRPTRNHLGIIGPIPLSEFEPENIRKKIEANPFARRARSDKARILTLTQSTY
                     DGVIYNVETIKECLGAEIDTLHFDEAWLPHAPFHDFYRDMHAIGENRPRSERAVVYAT
                     HSTHKLLAGISQASQIVVQESQTRKLDRNVFNEAYLMHTSTSPQYAIIASCDVAAAMM
                     EPPGGTALVEESIREALDFRRAMRKVEGEYGDADWWFKVWGPDELPARGIGEQSDWIL
                     KANDHWHGFGELAPDFNMLDPIKATIVTPGLDMSGSFGETGIP"
BASE COUNT          421 a          474 c          467 g          399 t
ORIGIN      
        1 tggaatacct gtttcaccaa aactgccaga catgtctaga cccggcgtga caatggtcgc
       61 cttgatcgga tcaagcatgt tgaagtcagg cgcgagttca ccgaacccat gccagtgatc
      121 gttggctttt aatatccagt ccgactgttc gccaataccg cgtgcgggca gctcatctgg
      181 cccccagacc ttaaaccacc agtcggcatc gccgtattcg ccttcgacct tgcgcatcgc
      241 acgccggaaa tccaacgcct cgcgaatgct ctcttcgacc aaggctgtgc cgccaggcgg
      301 ctccatcatg gccgcggcca catcacagga cgcaatgatg gcgtactgtg gtgaggtcga
      361 tgtgtgcatc agataggctt cgttaaagac gtttctatcg agtttacgag tctgggattc
      421 ctgcaccacg atctgcgagg cttgtgaaat gcctgccagc aacttgtggg ttgagtgcgt
      481 ggcgtagacc actgctcgct cgctgcgcgg gcggttctcg ccaatggcgt gcatgtcgcg
      541 gtagaaatca tgaaacggtg catgcggcaa ccaggcctca tcaaagtgca gggtatcaat
      601 ctcagcccca aggcactcct tgatggtttc aacgttatag atcacaccgt cataggtact
      661 ttgcgtaagc gtcaggatgc gggctttgtc agagcgcgcc ctgcgcgcaa acggattggc
      721 ctcaatcttt ttacgaatat tctctggttc aaattcgctt aacggaatcg ggccgatgat
      781 gcccaggtga ttgcgcgttg gccgcaaaaa caccgggatc gcaccagtca tggtgatggc
      841 gtgaagaatg gacttgtgac agttgcgatc aaccacaacg atatcgtcag tggccacgtt
      901 ggcatgccag acgactttgt ttgaagtcga tgtgccattg gtgacaaaaa agcaatgatc
      961 agcatggaaa atgcgcgccg cattcagttc tgattcggca atcggaccgg tgtggtcaag
     1021 caattgcccg agttcgtcca cggcattaca gacgtcggcg cgcagcatgt tctcaccaaa
     1081 aaactggtgg aacatttgcc caaccgggct tttaagaaag gccacgccac ccgagtgtcc
     1141 tgggcaatgc caagagtatg aaccgtcctg ggcgtattcc acgagttcct tgaaaaaagg
     1201 tggtgccaac ccatcaacgt agctcttggc ttcacggatg atgtgacgcg ccacgaactc
     1261 tggcgtgtct tcaaacatgt gaataaagcc atggagctcg cgcaggatgt cattgggaat
     1321 gtgctctgac gtacgcgtct cgccatagag atagatcggg atttcagcgt tgcgaaaccg
     1381 caattcaccg atgaacgagc gcagcttctg tattgcgctc gaatgatcca cggccacatc
     1441 gatatcgaaa tcttcatcat cgatcgacaa aataaaggca ctggctcggc tttgttgttg
     1501 agcaaaggaa cttaagtcgc cataacttgt gacgccgata acttccatgc cttcggcttc
     1561 aatggccgag gccaaagcac gcacaccaag accagaggcg ttttctgagc ggaaatcctc
     1621 atcgatgatg taaatcggaa aacgaaactt catggcaaac tccaaggcat gctcattacc
     1681 ggcaggcggg tgcccaactg ggtgctaggt acgaggtagg gtcacacctt cttgaccctg
     1741 atatttgcca ccacgatcct t
//
LOCUS       DATBNL010000517         3897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_86166, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000517 DATBNL010000000
VERSION     DATBNL010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86166"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..699
                     /locus_tag="VIC30_08990"
     CDS             148..699
                     /locus_tag="VIC30_08990"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: protein motif:HMM:NF016040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050385 - ureidoglycolate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HEY7804550.1"
                     /translation="MHIEPLSRSAFAKYGDVIGGHMPTEGVSINQGTTHKFATEALAL
                     TEQDGDEGGDQSSDQSSDQSQRGQGQAFLYRARAQPLPLTLHELECHHLGSQTFVPLA
                     GVSFVVVVALSDATGHAPNLQTLRAFWVDGNHAITLRAGTWHHGLIAMEDGDFVVIER
                     VAEQVDCQTIKLEPAIELKAYEL"
     gene            1043..2419
                     /locus_tag="VIC30_08995"
     CDS             1043..2419
                     /locus_tag="VIC30_08995"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7804551.1"
                     /translation="MRRHLTEDLKAWKSRSQRLPLLIDGARQTGKTYLLTTLFAKQFD
                     RFLHIDFLERPEFAGAFEGALTPTKVLANLQLLSGQPFDPKTDLLILDEIGECPRAVT
                     SLKYFAEQMPEAFVVASGSNIGLLNSFPVGKVEQHNLRPLSFHEFLIASGQTMLVDAF
                     EAQNRSKVAHDLLMQQLVDYYFTGGMPAAINAWFGTDELKVLERIQAVSRIHADLIAG
                     YQKDFGKYAGRTNAQLIDAVFKQIPAQISSVVDDSVKRFRFKDVHPPKTRYADFESAI
                     NWLHHCRLVLLNYPIEGQPRLPLVAHRKPSRVKLFLFDVGLLNHMLGTTYQQIKQQAY
                     EYKGFIAENFVQQELAVMGIEPTYAWTASNAEIEFLLTDNLGHTVPVEVKSGTRTRAK
                     SLVSYIDRYQPAKTVKLSALATETRAAPGQSHHTNPTTTTALHLPLYDVAFLPRLLGM
                     ALQRGKCP"
     gene            complement(2485..2886)
                     /locus_tag="VIC30_09000"
     CDS             complement(2485..2886)
                     /locus_tag="VIC30_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEY7804552.1"
                     /translation="MLRYLLDTNIVIYVLKRRPVEALSTFNANASRMAISTITLAELI
                     HGAEKSQYVSENLATVEDFCSRIEVLPYGMKAAHHYGAIRATLEKRGQPIGVNDLHIA
                     GHARSEGLVLVTNNISEFERVPALEVENWVG"
     gene            complement(2886..3119)
                     /gene="vapB"
                     /locus_tag="VIC30_09005"
     CDS             complement(2886..3119)
                     /gene="vapB"
                     /locus_tag="VIC30_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019575776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEY7804553.1"
                     /translation="MSIGTVFVNNRTQAVRMPVDVRLPEGVRKVEIRVRGQERIITPV
                     GQTWDSFFLGGPRVSDDFLPERASQEQAEREIL"
     gene            complement(3299..>3897)
                     /locus_tag="VIC30_09010"
     CDS             complement(3299..>3897)
                     /locus_tag="VIC30_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEY7804554.1"
                     /translation="LSMAPSQLGVFARSGPEHDRANVEYHVQALSLEKFGDPLHDFPA
                     FTASVCNLRPTSRGFVEITSPDTSAAPRINCCYLSTEEDRKVAAQSIELTRRIAAQPA
                     LAAYHPEEIKPGSEITSPEALAKAAGDIATTIFHPVGTCKMGNDDMAVVDASLRVHGI
                     DGLWVADASVMPTITSGNTNSPTLVIAQKAADEILRVA"
BASE COUNT          969 a         1045 c          973 g          910 t
ORIGIN      
        1 tcaaaggctt gtgggagtca ctggcgcaaa cctacggcag caatggtccg atgggtcaga
       61 catggagcat tggtctgacc accgtttggg tggtgttctt tgtggcgctc tacggcctat
      121 acattctgct cgtctaaagg atgacgcttg cacattgagc ctttgtctcg atcggccttt
      181 gccaagtacg gcgatgttat cggtgggcac atgcccaccg aaggcgtgtc gattaatcag
      241 ggcacaaccc acaagttcgc gaccgaggcc ctagcattaa ctgagcaaga tggtgatgaa
      301 ggcggtgatc aaagtagtga tcaaagtagt gatcaaagcc aacgcggaca aggacaggcg
      361 tttttgtatc gcgcacgcgc acaaccactg ccattaacgt tgcacgaact tgaatgtcac
      421 catctgggca gccaaacctt tgtaccgcta gcgggtgtga gtttcgttgt cgttgtggca
      481 ctgtctgacg ccactggcca tgcccccaat ctgcaaacgc tgcgggcctt ttgggtcgat
      541 ggcaaccacg ccatcacatt acgtgccggc acgtggcacc acggcctcat tgccatggaa
      601 gatggtgact ttgtggtcat tgagcgcgtg gccgaacagg ttgactgcca gaccataaaa
      661 ctcgaaccgg cgatcgagct gaaagcgtac gagctctgac agtaagggct gaccacccca
      721 ttcataggat gcccgattag gtgcggttcc ccgccatcgc cgacacaacc aggaaccgct
      781 gaacgctgcg gcttctagac ccgcacttgc ttgactgtga acggtgctgt gaacggtgcc
      841 agaacggcag ccaaacagcg cacaagctaa cgagttcggt tctgttcggg caacctagca
      901 ctcatgcgcg acacttttac ccgaataaaa atgtcgatct caaacacttt ttgcatggta
      961 aaagtgtata taaatgattt ttatacaatg gtaaaagtgt aaaattacgc tacagtcagg
     1021 aaataaatca gcgaaagaac cgatgcgcag acacctaaca gaagacctga aagcttggaa
     1081 gtccagatcg cagaggctgc cgttgctaat cgacggtgct cgccagaccg gcaagactta
     1141 cttgcttacg acgctatttg ccaagcaatt cgatcgcttc ttgcacatcg attttcttga
     1201 acggcccgag ttcgctggtg ccttcgaagg tgcgctgaca ccgaccaagg tgctagccaa
     1261 cctacagctt ttaagcggtc aaccctttga tccaaagact gacttgctca ttcttgacga
     1321 gattggcgag tgccctcggg cagtgacatc attgaagtat ttcgccgagc aaatgcccga
     1381 ggcgtttgtg gtggctagtg gctcaaacat cggtctgctg aactcgtttc ctgttggcaa
     1441 agtcgagcag cacaatctac ggcctctgtc gtttcacgag ttcttaatcg caagcggaca
     1501 gaccatgttg gttgatgcct ttgaggctca gaacaggtca aaggtggcac atgaccttct
     1561 aatgcagcag ctggttgatt attacttcac aggcggtatg cctgcagcta tcaatgcttg
     1621 gttcggtacc gatgagttaa aagttctcga gcgcatccaa gccgtcagtc gcattcacgc
     1681 tgacttgatt gccggctatc aaaaagactt cggcaaatac gccggacgca cgaacgcgca
     1741 actgattgat gctgtgttta aacaaatacc cgcccaaatc tcatcagtcg ttgacgattc
     1801 ggttaagcgg tttcgcttta aagatgtaca cccccccaaa actcgttatg ctgactttga
     1861 aagtgccatc aactggttac accattgtcg tttggtgttg ctgaactatc caatcgaagg
     1921 ccaaccccgg ctaccactag tggcccaccg taagccatcg cgagtcaaac tatttctgtt
     1981 tgatgttgga ctgctcaacc acatgttggg caccacgtac cagcaaatca aacagcaagc
     2041 gtacgaatac aaaggattca tcgcagaaaa ctttgtgcag caagagttag ccgtaatggg
     2101 tattgaaccc acctacgctt ggacagcatc taacgccgag atcgaatttt tgttgactga
     2161 caatctgggt catactgtgc cggtcgaagt caaaagcggc acacgcacgc gagccaaatc
     2221 actggtctca tacatcgacc gctaccaacc ggcaaagacc gtcaagctat ccgctttggc
     2281 aaccgaaaca cgagcagcac ccggtcagtc tcatcataca aatccgacca caaccactgc
     2341 gctacatcta ccgctctacg acgtggcgtt cttgccccgg cttttgggga tggccttgca
     2401 gcgagggaag tgcccctagt gaatattcaa ttggcacagg tcgttcgttt ttaatcggca
     2461 caaacaaacc gcaaaacata tctgctagcc cacccagttt tcaacttcta acgctggcac
     2521 ccgctcaaat tcagagatgt tgttagtcac cagcactaat ccttcactgc gggcgtggcc
     2581 cgcaatatgc aggtcattta cgccaatagg ttgaccgcgt ttttctaggg tggctctgat
     2641 ggcaccgtag tggtgtgcgg ccttcatacc atatggcagc acttcgattc gactacagaa
     2701 gtcctcgaca gtagccaaat tctcactcac gtattggctt ttttctgcac cgtgtattaa
     2761 ttccgctagg gtaatggttg aaatagccat ccgactggca ttcgcgttaa acgttgaaag
     2821 tgcctcgact ggccggcgct ttaatacata gatgacgata ttggtgtcga gcaagtaacg
     2881 cagcatcaaa ggatttcccg ctccgcttgt tcttgggatg cccgttcggg cagaaaatca
     2941 tcgctcaccc gcgggccacc caaaaagaaa ctgtcccaag tttgaccaac gggagtgatg
     3001 atgcgctctt gccccctaac gcgtatttct accttgcgca cgccctcagg caagcgaaca
     3061 tccaccggca tccgaacagc ttgggtgcga ttattcacaa aaacagtgcc aatagacatg
     3121 acgagcccct gaaatatgta tatagccatt gtataaagca tcgtatgggc agtcaagttg
     3181 atacgacagt gtttgcgcac agaacgtctc ttatatgcgc accgaaacta gcctgccgtt
     3241 atcaaaacga aaggatgaga acaaaaactt tgatcgaacc cagttttacg caagcaactt
     3301 aagccacccg caaaatctca tcagctgcct tttgcgcaat caccagcgtg ggtgaattgg
     3361 tattgcccga tgtgatcgtt ggcatgaccg aggcatcggc tacccaaagg ccatcaatgc
     3421 catggactcg cagactggca tcgacgactg ccatgtcgtc attgcccatc ttgcaggtac
     3481 caaccggatg gaagatcgtt gtggcaatat cacccgcggc tttggccaat gcctcagggc
     3541 tcgtgatctc tgacccgggt ttgatctctt cggggtggta ggcggcaagc gctggctggg
     3601 ctgcgatacg acgggttagc tcaatacttt gagccgcgac cttacggtct tcctcagtcg
     3661 agaggtaaca gcagttaatt ctcggcgcgg cgctcgtatc aggtgatgtg atttccacaa
     3721 accctcggct tgtgggtcga agattgcaga ctgacgccgt gaatgccggg aagtcatgca
     3781 acggatcacc gaacttctca agcgacaacg cttgcacgtg atactcgaca ttggcacgat
     3841 cgtgttctgg gccagaccgt gcgaatacgc ctagctgcga cggtgccata ctcaaag
//
LOCUS       DATBNL010000518         3333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_45955, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000518 DATBNL010000000
VERSION     DATBNL010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45955"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            38..1921
                     /gene="hscA"
                     /locus_tag="VIC30_09015"
     CDS             38..1921
                     /gene="hscA"
                     /locus_tag="VIC30_09015"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015876413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEY7804555.1"
                     /translation="MALLQIAEPGQSPVPHQRKVAVGIDLGTTNSLVAAVRHSVPEVL
                     PDAQGHALVPSAVYYAGGDDVRIGRAALEHQQSQPTDTLVLIKRLMGKSLQDAQDSNM
                     PYQFEEMGTSVAIATTHATVTPVKVASHILKHLKHLAEQTLGDDLVGAVITVPAYFDD
                     AQRQATRDAARLAGINVLRLLNEPTAAAIAYGLENGSEGIYAVYDLGGGTFDLSLLRL
                     TQGVFEVIATGGDTALGGDDFDEAIIAQAMQDQGTLAGGDTTVANKLTDAQRRHLLMA
                     ARTLRERLTTADEATVPTGLDGQLSALTLTRDQFATLARPLIERTLACAQRALDDAQI
                     APADVKGVVMVGGATRMPVVQQLVGEFFARDPLVNLNPDEVVALGAALQANMLAGNRN
                     PGEDWLLLDVTPLSLGLETMGGLVETIIPRNSTIPVARAQEFTTYREGQTALAVHVVQ
                     GERDLVSECRSLARFELRGIPPMAAGAARIRVTFQVDADGLLNVTAMEQFSGVTAEVT
                     VKPSHGLTDEQIATMLQDSVAQADNDATLRMLREEQVTGQQLIETTEAALDVDADLLS
                     PEELATVKSRLSEAALAMASEDLDDVRAAVKALSAATDEFAARRMDRSIRKALAGKSL
                     DEI"
     gene            1997..2338
                     /gene="fdx"
                     /locus_tag="VIC30_09020"
     CDS             1997..2338
                     /gene="fdx"
                     /locus_tag="VIC30_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013394592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEY7804556.1"
                     /translation="MPKLTVLPHADICPEGAVIENAPVGESICRVLLDNHLEIEHACE
                     LSCACTTCHVVVKQGFDSLEEATDSEEDLLDRAWGLAPTSRLSCQAMIADEDLTIEIP
                     RYTINHARENH"
     gene            2449..3261
                     /locus_tag="VIC30_09025"
     CDS             2449..3261
                     /locus_tag="VIC30_09025"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY7804557.1"
                     /translation="MRPNTVKQRLQKGESIINGWLIIPSPLSAEVVGLSGCDSVVVDL
                     QHGMIGFDAALPMLQALSATPAIPLVRAPANDGPMIMRLLDAGAYGVICPMISTPEQA
                     EAFVSTCRYPPKGERSFGLSRALLYGGDDYYGHANESILTLAMIETQQGLDNVDDILS
                     VDGLDGVFIGPNDLSLAFGQTPSSEPDAAVVVQAIAHILARAQVHGKIPGIFCSSGQT
                     AAKRLAQGFKFVVPGNEFTHLKQAAAAAVTQARDSQNAQGSKGSTGHGAGGY"
BASE COUNT          718 a          850 c          957 g          808 t
ORIGIN      
        1 atcttgagaa cctgacaaat cacacggact gaattttatg gctttgttgc aaatcgccga
       61 gcctgggcaa agcccagtgc ctcaccaaag aaaggtggct gtcggcatcg atctaggcac
      121 cactaactcg ctggtggctg cagtcaggca cagtgtgcct gaagtgttgc cagatgcgca
      181 gggccatgcg ctcgtgccat cagcggtcta ctacgctggt ggcgatgatg tgcgcattgg
      241 tcgcgctgcg cttgagcacc aacaaagcca accaaccgat acgctcgtct tgattaagcg
      301 gctcatgggc aaatcactgc aagacgccca agacagcaat atgccttacc agtttgaaga
      361 gatgggtaca agcgtggcca ttgcgacgac tcacgccacg gtcacgccag tcaaagtagc
      421 ctcccatatc ctgaagcatt taaagcacct tgctgagcaa acgttgggtg atgatttagt
      481 gggtgcggtc attacggtac cggcttattt tgatgatgcc caaaggcagg ctacacgtga
      541 cgccgctagg ctcgccggta ttaatgtctt acggttgcta aacgaaccga cggctgcagc
      601 tattgcgtat ggccttgaga atggctccga aggtatttat gccgtctacg accttggtgg
      661 tggcacattc gatctgtcgc tgctgcgtct gacccaaggt gtgtttgagg tgattgccac
      721 cggcggtgat accgcattgg gtggcgatga tttcgacgaa gcgattattg ctcaagccat
      781 gcaggatcaa ggcacactcg ctggcggtga tacgacagtg gcgaacaagc taactgatgc
      841 gcagcgtcgt catctattaa tggctgcgcg cactttgcgt gagcgtttaa ccacagccga
      901 tgaggccact gtgccaactg ggcttgacgg tcaattaagc gctctgacgc ttacccgtga
      961 tcaattcgcc acgctggccc gtcccttgat tgaacgcaca ctggcgtgtg cgcaacgcgc
     1021 gctagatgat gctcagatag ccccggctga cgtcaaaggc gtggtgatgg tcggtggcgc
     1081 tacccgtatg ccggttgtgc agcaattggt tggtgagttt tttgcgcgcg accctttggt
     1141 gaacctgaat cccgatgagg tcgtggcact tggtgcggca ttgcaagcca atatgttggc
     1201 gggtaaccgc aatcctggcg aagactggct gcttttagat gtgacgccgc tatcgctcgg
     1261 tctagagacc atgggcggtt tggttgaaac catcatccca cgcaacagca ccattcctgt
     1321 ggcccgtgca caagagttca caacctatcg ggaagggcag acggctttgg ctgtgcatgt
     1381 ggtgcaaggc gagcgcgact tggtgagcga atgtcggtca ttggcacgat ttgaattgcg
     1441 cggtattccg cccatggctg ctggtgccgc ccggattcgg gtgacgtttc aggttgacgc
     1501 tgatgggcta ctgaatgtta ctgccatgga gcagttcagc ggcgtcaccg ctgaagtgac
     1561 ggttaaaccg tcgcatggtc tgaccgatga acagattgcc acgatgctgc aagacagtgt
     1621 tgcccaagcc gataacgatg ccacgctacg catgttgcgc gaagagcagg tcacgggtca
     1681 gcagttgatt gaaacgaccg aggctgcgct tgatgttgat gctgatttgc tctcgccaga
     1741 ggagctcgct acggtcaagt cccggttaag cgaggccgct ttggcgatgg catctgagga
     1801 tttggatgac gtacgcgctg ctgtgaaagc tttatctgca gccaccgatg aattcgccgc
     1861 tagacgcatg gatcgaagca tcagaaaagc cttggctggt aagtcgctcg atgaaatttg
     1921 attgttgcgt cctgattgtg tagatcaacg ttgatttgtc gggtctgccc tttattattt
     1981 atttcggaat gtatcgatgc ctaaactaac tgtcttgcca cacgccgaca tttgtcccga
     2041 aggcgctgtc attgaaaacg ctcccgtggg tgaatccatt tgccgggtgc ttttggataa
     2101 ccacctggaa atcgagcacg cctgtgagtt gtcctgcgcc tgcacaacct gccacgtggt
     2161 ggtcaaacag gggtttgact cactagaaga ggccactgac tcagaagagg acttgcttga
     2221 ccgtgcttgg gggctcgcac cgacatcccg actgtcatgc caggccatga ttgccgatga
     2281 agacttgacg attgagattc cccggtacac gattaaccac gcccgagaaa atcactagtc
     2341 gtatccacta gcgctcatta gcaacactca gcaccaacgc cgctaggctc attcgggcag
     2401 gatgtttgag ccagtcgctt ttggtccgtg tattgatcgg ggtatatcgt gcgtccaaac
     2461 actgtcaaac aacgccttca aaaaggcgag tccatcatta atggttggct tattatcccc
     2521 tcaccattgt ctgccgaggt ggtgggtttg tcaggctgcg acagtgttgt tgtggatctg
     2581 cagcatggca tgattggatt tgatgcggca ctcccgatgc tacaagcatt gtcagccaca
     2641 ccagccatcc cgttggtgcg cgccccggcc aatgatggtc cgatgattat gcgcttgctt
     2701 gacgctgggg cttatggggt gatttgcccc atgatttcga cgcctgagca ggccgaagcc
     2761 tttgtaagta cttgccgcta tcctcccaag ggtgagcgtt cattcgggct atcgcgcgct
     2821 ttactatacg gtggcgacga ctattacggg catgctaatg agtcgattct gacgcttgcg
     2881 atgatcgaga cgcaacaagg cttagataac gtcgacgaca ttctgagcgt tgacggcttg
     2941 gacggtgttt ttattgggcc aaatgatttg agtctggcgt ttggccagac gccaagctca
     3001 gaaccagacg cggcagtcgt ggtgcaagcc attgcgcata tcctggcccg cgctcaggtg
     3061 cacggcaaga ttcctggtat tttttgttca tcaggtcaga cagcagccaa gcgtctggca
     3121 caaggattta agtttgttgt acctggcaat gagttcacac atttaaagca agccgctgct
     3181 gctgcggtca ctcaagcgcg ggattcacag aacgcccagg gttcaaaggg ttcaactggc
     3241 catggtgccg gtggttatta aggtgataaa gacgtgagca ttcgactatc ggccaatctg
     3301 ggatttctgt gggcgcattt gccgcttcta gaa
//
LOCUS       DATBNL010000519         1883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_195152, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000519 DATBNL010000000
VERSION     DATBNL010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195152"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1819)
                     /locus_tag="VIC30_09030"
     CDS             complement(<1..1819)
                     /locus_tag="VIC30_09030"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY7804558.1"
                     /translation="MTNPTDNSTATVESEGPLQSDPLLVCLALMTQLLDNPIPMNTLR
                     SGFALDTKGHIPPAAIPEVATRYGFKAAWVKRRASEFPNYALPVAAPLMDGRVAILRS
                     IKDGQATVLFAESGMRPHEMPIQEFNALLSDQTLIVKLQPKTSKQQLVPLKNEAFGWF
                     WNTMWRFRRFYYESMVATVVANILTLATVFFTMNVFNRVIPSEAYISLWTLTIGVGIA
                     MLLEFLMRWLKARLVDEGAKRADLAVNSTLLREIMSVRLDHRPQSIGIFSSSMRDFDS
                     LREFISSSLFVTVADLPFVFMFLFLIWVIGGPLVWIPVVVVPVLIILSLVVQPKLMRA
                     MRKNMKQAGEKQSVLVEALMNLEMLKAHNAESYLQRRWEKSNAAAVQSFMDIRKTSIW
                     LTGLTTTLQQATSVSIIVMGVYLIHDNNLSLGALIACNILAGRAVMPLGQIVQLATRY
                     QQAKTSLEMLDGLVQRPRDRDHDQRYIIPDAFKGRLAADNLEFAYPGPQPIPVIDKVS
                     LALDPGDHVALLGHVGCGKSTLLRLMAGLYRPLSGSVRVDELDALQIEPSELRSRIGY
                     VGQDAQLFMGSLRENLVLSETWITDERIMEVLKPLGIYPM"
BASE COUNT          482 a          519 c          471 g          411 t
ORIGIN      
        1 tcattggata aataccaagc ggttttaaga cttccatgat tcgctcgtcg gtaatccatg
       61 tctccgagag cactaggttt tctcgtagcg aacccatgaa cagttgggcg tcttgaccga
      121 cataaccaat acggctacgc aactccgaag gctcgatctg cagggcatca agctcatcga
      181 cacgcacact gccacttaag ggtctataca gcccggccat tagccttaac aacgtgcttt
      241 tgccgcatcc tacgtgccca agcagtgcca cgtggtcgcc aggatccagt gccaaagaga
      301 ccttatcaat caccggtatg ggttgtgggc cagggtaggc aaactccaag ttgtcagccg
      361 ctagacgacc cttgaatgca tccgggatga tgtagcgctg atcgtgatcc cggtctctcg
      421 gacgctgcac cagaccatcg agcatctcca gcgatgtctt ggcttgttga tagcgcgtgg
      481 ccagttgcac aatttgaccc agtggcatta cagctcgccc agccaaaata ttacacgcga
      541 tcaaagcacc tagagacagg ttgttgtcgt gtatcaggta aacgcccatc acgatgatcg
      601 acaccgaggt tgcctgctgc aaagtggtcg tcaatccagt taaccagata ctcgttttac
      661 ggatatccat gaatgactgg accgctgccg cattggactt ctcccagcga cgctgcaaat
      721 agctctctgc attatgtgct ttgagcattt ccaaattcat gagcgcttca accagaactg
      781 actgcttttc gccggcctgt ttcatgttct tgcgcatggc gcgcataagc ttgggctgca
      841 ccaccagtga cagaataata agcaccggca ccactaccac aggaatccac accaatggtc
      901 caccgatcac ccagatcagg aacaggaaca tgaatacaaa tggcaagtca gccacggtga
      961 caaacaagga cgatgagatg aattcacgca acgaatcaaa gtcgcgcatg gagctagaaa
     1021 aaataccgat ggactgcggc cgatgatcaa gtctgaccga catgatttca cgcaacagcg
     1081 tcgagttcac tgccaggtca gcccgcttgg cgccttcgtc gacgagccta gccttaagcc
     1141 agcgcatcaa aaactcgagc aacatggcaa tgcccacccc gatggtgagc gtccaaagag
     1201 aaatgtaggc ttcagacgga atgacccggt taaacacgtt catcgtgaaa aacacggtcg
     1261 ccagcgtcaa tatgttggca accactgtgg ccaccatgga ttcgtaatag aaccgacgga
     1321 aacgccacat cgtgttccag aaccagccaa atgcctcgtt tttcagtggc accaactgct
     1381 gcttgctcgt tttgggctgc aacttgacga ttagggtttg atcgctaagc aaggcgttga
     1441 actcttgaat cggcatttca tgcggtcgca tccccgattc agcaaacaaa acggttgctt
     1501 gcccgtcttt aattgagcgc aatatcgcca ctcggccatc catcaaaggc gcggccaccg
     1561 gcaaggcata gttggggaat tcgctggccc ggcgcttgac ccaggccgct ttaaacccat
     1621 agcgggtcgc gacctcaggg atggcggctg gcggaatatg accctttgta tctaacgcga
     1681 atcccgaacg caaggtattc atcggtattg ggttatcgag taactgggtc atcaaagcca
     1741 aacaaaccag taaggggtcg ctttgcagcg ggccctcgga ttcaacggtg gctgtcgagt
     1801 tgtcggtcgg gttagtcaag tgagattacc taagaataaa gcgctaaacc tgccatttta
     1861 accccgtaag ggctgcgagg act
//
LOCUS       DATBNL010000520         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_76118, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000520 DATBNL010000000
VERSION     DATBNL010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76118"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VIC30_09035"
     CDS             <1..609
                     /locus_tag="VIC30_09035"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY7804559.1"
                     /translation="NALGEVFARITGPNWHAVINAQSAHTEQAPNGDRFLVLVDGTRY
                     EIKPGQAQTRITKFDAFAIRLESPNAGETLAQARARALDNRKARPTLMLLGDEVARSD
                     GQLMWRLAIPLATINLALLAIPLGAVNPRVGRTFDLLIAGLVALLYMNLINASHGWIN
                     NSLLPFGVGVWLVHGLFLSLTVGLFWWRSRMRRPADPIVAPA"
     gene            777..1715
                     /locus_tag="VIC30_09040"
     CDS             777..1715
                     /locus_tag="VIC30_09040"
                     /inference="COORDINATES: protein motif:HMM:NF009327.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEY7804560.1"
                     /translation="MNLQQFRFVRETIRRNFNLTEASKALYTSQPGVSKAIMEFEQEL
                     GVQIFERHGKRIKGLTKPGQAVAEVVERINREIENLKKVSDEFAKRDQGSLVIACTHT
                     QARYALPSVIPAFRAQFPKVRLALAEGSPTQLAEMVLDGQADLAIATESLAQTPGLAR
                     VPCYRWEHAVVCQPSHPLAEHWQTTQSVTMADLVKYPIVTYDRAFSGRRNIDDAFGSA
                     GLQPDIVLAAIDADVIKTYVGVGLGIGIIAGMAYNANNDKGLVCIPVGHLFGTQTSRV
                     AVRAGEFLRDYVYTLIGMLAPELKAAEIRALLRSSL"
BASE COUNT          406 a          468 c          491 g          456 t
ORIGIN      
        1 aatgcgctcg gtgaggtgtt tgcccgtatc actggcccta actggcacgc ggtgatcaat
       61 gcacagtccg ctcacaccga gcaagcgccc aatggtgatc ggttcctagt gctagttgat
      121 ggcacgcgct acgagatcaa acctggccaa gcgcaaacta ggataaccaa attcgatgcg
      181 tttgcaattc gattggagtc tccaaatgca ggtgaaacat tggcgcaagc gcgggcccga
      241 gcgctcgata accgcaaagc tcgtcctacg ctaatgctgt taggtgatga ggtggcacgc
      301 tcagacgggc aactcatgtg gcgattggcg attccgctag cgaccattaa tctcgcgctc
      361 ttagctattc cattgggcgc agtcaaccca agggtggggc gaacgtttga tttgctgatt
      421 gccggattgg tggcgctcct atacatgaac ttaatcaacg cttcacatgg ttggattaac
      481 aacagcctct tgccctttgg cgttggggtt tggttggttc acggtctatt cttaagtttg
      541 accgtggggc tgttctggtg gcgatctcga atgaggcgcc cagctgatcc aattgtggca
      601 ccggcttagc actgcatcac cgccttgggg ctgcgtcact ccctcgcttg tttactaata
      661 actaaaagtc attgtttgtc tttttagaat aacttacaat atcgagcgat ctagtgccat
      721 tcgtatgcct gtcgtgccta caactggcta gttatttttt gacgtgcgag agcctgatga
      781 atttgcagca gttccgtttt gtgcgcgaaa ccattcgacg caacttcaac ctgaccgaag
      841 cttctaaagc cctgtacacc tcacaacctg gcgtctcaaa agccatcatg gaatttgaac
      901 aagagctcgg tgtgcagatc ttcgagcgtc acggcaagcg catcaaggga ttgaccaagc
      961 caggccaagc ggtagccgaa gtggttgagc gcatcaaccg ggaaatcgaa aacctaaaaa
     1021 aagtcagcga cgagttcgcc aagcgtgacc aaggcagtct ggtgattgcc tgcacgcaca
     1081 cccaggcgcg ctacgcattg ccctcagtta ttcctgcctt tcgggcgcaa tttcccaagg
     1141 tacgtttggc gttggctgag ggcagcccca cccagcttgc ggaaatggtg ctcgatggac
     1201 aagcggactt ggccatcgcg accgaatcgc tggcacagac cccaggcttg gccagggtgc
     1261 cttgttaccg ctgggagcat gcggtggttt gccagccaag ccatcctttg gctgagcact
     1321 ggcaaacaac ccagagtgtg accatggctg acttggtgaa atatccaatc gtcacctacg
     1381 accgcgcgtt ttctggtcgt cgtaacatcg acgatgcgtt tggctcggct ggcctgcagc
     1441 ccgacattgt gttggccgct attgatgctg acgtcatcaa aacgtatgtt ggcgttggtc
     1501 tgggcatcgg cattattgct ggcatggcct ataacgctaa caatgacaag ggtttggttt
     1561 gtatccccgt cggtcatttg tttggtacgc aaacctctcg ggtcgcagtc agggcagggg
     1621 agttcttgcg tgactatgtc tacacactga tcggtatgtt ggcgcctgaa ctaaaagcag
     1681 ctgagatccg cgcgttgctt agatcgagcc tatagaggtt tccaacgcga taggaaaaat
     1741 tgacgcctat aacggctggt taggcttgca atgcaaataa taatgattat catttgagtt
     1801 tcattctgtc attgtcactc a
//
LOCUS       DATBNL010000521         1803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_155904, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000521 DATBNL010000000
VERSION     DATBNL010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155904"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..1305
                     /locus_tag="VIC30_09045"
     CDS             304..1305
                     /locus_tag="VIC30_09045"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012204887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HEY7804561.1"
                     /translation="MAQDLVVRRPQGLYCPPGDFYIDPWRPVERAVITHAHADHARTG
                     HGHYLASETGQDVLRTRLGDIHLQALAYGQTIAHNGVKISLHPAGHVLGSSQVRLQWR
                     GEVWVVSGDYKLDADPTCAAFEPVTCHTFITESTFGLPVYRWPDTHQTMQDINAWWAS
                     NARQQRASVLYAYSLGKGQRILAGIDASIGPIVTHSSLNALNDVYRAAGVSLPITKSV
                     TELTDSERKCALVLAPPAVAGSTWLRRFDGYVDAMASGWMRVRGARRRRGVDRGFVMS
                     DHADWPSLLKAIEATEAERVIVTHGSTAVLIRWLQEQGLKAQAFETDYGHEGDAQDE"
     gene            1347..>1803
                     /locus_tag="VIC30_09050"
     CDS             1347..>1803
                     /locus_tag="VIC30_09050"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF016553.4"
                     /note="catalyzes the ATP-dependent formation of a
                     phosphodiester at the site of a single strand break in
                     duplex DNA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEY7804562.1"
                     /translation="MKRFADLYQALDQTTSSRLKTEHMVAYFQAASAEDAAWAVYFLA
                     GGKLKRLMTTQQLRQYAQTQVAMPDWLFEACYQNVGDLAETITLVLPPSTCTRQEGLA
                     QWVEQVLLPLKAEPSEARAAALHTVLDGWDTETRFVCLKLMTGGLRVGVS"
BASE COUNT          421 a          454 c          518 g          410 t
ORIGIN      
        1 ggctcgcgcg ccataccccg ggcggcagac gagtttgctc aacggattgg gttgttgctg
       61 tggttgaggt tgttaaaaca gttggagcca tgtgttgcac cacattcatg aaatgagagg
      121 gcaggaagat aaaaagcctg tatgacgatg ttgaaaaatc tgtataaaaa tctgtaaaaa
      181 agctgcacta agaacctgta taaggcatct taaatactgt ataaatatac agttaaagta
      241 accctaaacc agttcattga tcaacctttt catcaaccct gctatgaacc ttgttgttta
      301 cccatggctc aagacttagt cgtgcgtcgc ccgcaagggc tttactgtcc gccgggcgac
      361 ttctacatcg acccatggcg cccggtcgag cgcgcggtca tcacgcacgc gcatgctgat
      421 catgcccgta ccggtcacgg tcattacctc gcgagcgaaa ctggtcaaga cgtgttgcgt
      481 acgcgtttag gtgacatcca tctgcaggcg cttgcctatg ggcaaacgat tgcgcacaac
      541 ggcgtcaaga tcagtctgca tccggcaggg catgtattgg gttcgtcgca ggttcgcctg
      601 cagtggcgtg gcgaggtctg ggttgtttcg ggtgactaca agcttgatgc ggatccgacg
      661 tgtgcagcgt ttgagccggt gacttgccat acctttatca cggaatccac attcggcttg
      721 ccggtctatc gttggcccga tacgcaccaa accatgcaag acatcaatgc ctggtgggca
      781 tcgaatgctc gccaacaacg ggccagtgtg ttgtatgcct attcgctggg caaaggccag
      841 cgtatcttgg ctggcatcga cgccagcatc ggcccgattg tcacgcacag ttcattgaat
      901 gcgttaaatg atgtttaccg agctgctggt gtgtctttac cgatcactaa gtcagtgact
      961 gaactcaccg atagcgagcg caaatgtgcg ctggtactgg caccgccagc agtcgctggc
     1021 agcacttggc tacgacgctt tgatggctat gtcgatgcca tggccagtgg ctggatgcgt
     1081 gtgcgaggcg cgcgcaggcg acgcggtgtg gacagagggt ttgtgatgtc agaccatgcc
     1141 gactggccaa gtttgttaaa ggcgattgaa gccactgagg ctgagcgcgt gatcgtcacg
     1201 cacggtagca ccgcggtgtt gattcgatgg ttgcaagaac agggcctgaa agcacaggca
     1261 tttgagactg attacggtca tgagggagac gcccaggatg agtaacgaca taggatgaat
     1321 gacagcaatc aaaggcaaag cacgccatga aacgttttgc ggacctgtat caggcactgg
     1381 atcagaccac atcgagtcgt cttaaaacag aacacatggt ggcttatttc caggcggcat
     1441 cggccgagga tgccgcctgg gccgtgtatt tcttggcggg tggcaaatta aagcgcctga
     1501 tgactacaca acaactgcgc caatatgcgc aaacacaagt ggccatgccc gattggctct
     1561 ttgaagcctg ctatcaaaac gtgggtgact tggccgagac catcacattg gtcttgccac
     1621 cgagcacttg cacgcgccaa gaggggctag cccaatgggt cgaacaggtg cttttgccat
     1681 taaaagcaga accatcggag gcacgcgctg cggccttgca caccgtacta gatggttggg
     1741 acaccgagac ccggttcgtt tgcttaaagc tcatgacggg gggcttgcgc gttggtgttt
     1801 caa
//
LOCUS       DATBNL010000522         1920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_145946, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000522 DATBNL010000000
VERSION     DATBNL010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145946"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(491..1321)
                     /locus_tag="VIC30_09055"
     CDS             complement(491..1321)
                     /locus_tag="VIC30_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF932 domain-containing protein"
                     /protein_id="HEY7804563.1"
                     /translation="MLASRLASRSPVLRSASPLTDDQIRAVVPSIFAEAPHESRSHRY
                     SYIPTVAVLDELRKEGFHPFMVTQTRVRNEDRRDFTKHMIRLRHAGQINDRGEANEII
                     LLNSHDGTSSYQMLAVMFRFVCSNGLVCGETVADVRVPHKGDVTAQVVEGAYRVLSGF
                     DNARESRELMQEITLDDGEAEVFARAALSLKYDDPQKPAPVTENQILLPRRAEDTKPD
                     LWSVFNRTQENLTKGGLSGRTANGSRQKTRPVRGIDQNIKLNRALWLLADGMRQLKAG
                     "
BASE COUNT          470 a          530 c          494 g          426 t
ORIGIN      
        1 gtcccgctat ctcaataatc ttgccaacta ccatacatct ccactcgata atcgaataat
       61 cccggtgtgt tatcactaag gtgtccaatt gaccctgcgc agtatccgac caatagccaa
      121 ccttgatcag aatcatcgcc ccggcatccc tgagaactaa ctcgggcacc tagcgttgaa
      181 tggggaccac aactgaacga caagaaagac taaataaatc atctaggtaa accatacctc
      241 agatttattg aggccacaaa tatctgcatc aacaagtcgc caaagcccca aactagctag
      301 gtctgcccca ccccaccagg gtgcgtcatg tgtgacgcct ttaagggatg aaacacggtt
      361 tacgtttcag accgtgaagg cgtcagcagg cacgccagtg actgcaaggt ctagatcctg
      421 gggcccggca tggccgggcg acacttgatt ggaccaccca taaaaaagag gggttagccc
      481 ctcacttgca ttacccagct tttaattgac gcattccatc agccagtaac cacagtgccc
      541 gattgagctt gatgttttga tcgatgccac gcactggccg tgtcttttga cgactgccat
      601 tagcggtgcg acctgacaaa ccacccttgg ttaaattttc ctgggtacgg ttaaagacgc
      661 tccagaggtc cggcttggta tcttcagcac gtcttggtaa cagaatctgg ttttctgtca
      721 cgggcgctgg tttttgtggg tcgtcatatt tcaatgacag ggcggcacgt gcgaacactt
      781 ccgcctcgcc atcgtccagg gtgatttctt gcatcagttc tcgggattcc ctcgcattgt
      841 caaagccact caaaacccgg taggcgcctt cgactacctg agccgtcaca tcccctttgt
      901 gaggcactcg gacatcagcc accgtttcac cgcaaacaag tccgttactg catacaaacc
      961 gaaacatgac tgccagcatc tggtaactgc tggttccgtc atgcgaattg agcaaaataa
     1021 tttcgttggc ttcgccgcga tcattgatct ggccagcatg gcgcaagcgg atcatgtgtt
     1081 tagtgaagtc gcgccggtct tcatttcgta cccgggtctg ggtaaccata aaggggtgaa
     1141 atccttcctt gcgcaattca tccaatacag ccacggtcgg gatgtaactg tatcgatgag
     1201 agcggctttc atgtggtgcc tctgcaaaga ttgatgggac cacagcacgg atttggtcat
     1261 cggtcaaagg tgatgcactg cgaagtactg gggaacgcga agccaagcgt gatgccaaca
     1321 ttttttactc tcctgtcata aatggttgat ctgttcactg cacaccggat tccaagattc
     1381 ggagcccgtc ctttcggcgg ttctgtgcag ttggcacgag gaacccggct ggcttggttg
     1441 ccaccgtctt tcctgagttc atcgcccacg acggtcagga gcccacgaac gtggaccgtc
     1501 aaggagaaaa gcagcaggta ggtgcggccc gcaggcttgc cgaggacacg gcctgatgcg
     1561 ccttgatggc ccacggccac gggctacagt cggggaatag gtgatgagat cggaaagaca
     1621 atggcaactg ccgcgtcccg acgctgtcga atgcacgcaa gcaaagcgcg caggctcgga
     1681 tcactgtgcc gggccgaagg cgtcagggat ggaaaagacc ggcgtcttgc cggtcccgtc
     1741 acggatgagc gactagggaa cctgacacag ctcagtccgc atcgcggaga cgctaaaaca
     1801 cgatctcagt caaaccaaat tgctaaaaga cacagcatgg cccgtctagg accagcacat
     1861 agaaccaggg tagttgacaa gtcacattca gagatttcag gtatcggact gaataatgcc
//
LOCUS       DATBNL010000523         3164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_5916, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000523 DATBNL010000000
VERSION     DATBNL010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5916"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VIC30_09060"
     CDS             complement(<1..324)
                     /locus_tag="VIC30_09060"
                     /inference="COORDINATES: protein motif:HMM:NF018391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEY7804564.1"
                     /translation="MSFKVFNLQCDAGHIFEGWFGSHDDFDAQQARGLLSCPMCQSAE
                     VKKMPSAPRINSSRTLVPAAELQAGEGASHQPVATTAMRNTHTPIPAELQKIQAELLS
                     HLREAV"
     gene            complement(440..2152)
                     /locus_tag="VIC30_09065"
     CDS             complement(440..2152)
                     /locus_tag="VIC30_09065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804565.1"
                     /translation="MAADKKMMTDQNIVLEVSDLSIAIDHDEQLKFAVKQLALTVHRG
                     ETFALVGESGSGKSMTALALMRLLPEALQVVQGDVLLDGQNINALTEMAMQQVRGARV
                     SMIFQEPGTSLNPVMRIGDQLLETIQAHTALRGQAARERAIHWLNRVGIPEPELRIDH
                     YPFQFSGGQKQRVMIAMALAAEPDLLVADEPTTALDVTVQAQILELLADIQKELGMAV
                     LMITHDLAIVYQVADTVALMRHGEIVDTAPAAEFFKSPKHPYARELFDAIPTFDKRGK
                     PLSAVGQQARAAAGEVTDNSDQSSEVVLAVQGLRVGYPIRRGWLRRLVGVTQVVDGVN
                     FELRVGQTLALLGGSGCGKTTVAKTLLRLLDGTAVFSGDVRLGGQDLFAAKGAALKAL
                     RTQIQIVFQDPFASLDPRMRVGEILQEGVAALLPDMRADDRQKRVLDLLDRVGLPTDA
                     ATRYPHEFSGGQRQRIAIARALAVKPKVLILDEPTSALDVSVQAQILDLLNDLQRESG
                     MAYLFITHNFGVVEYFADDIAIMDAGELVEMGLAADVLHEPKHAVTKRLLHAVPRLSF
                     EQRT"
     gene            complement(2152..>3164)
                     /locus_tag="VIC30_09070"
     CDS             complement(2152..>3164)
                     /locus_tag="VIC30_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008168341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804566.1"
                     /translation="GLATAAILLAIVLALITRSRRRRGQSIQSMQSMPWTQVASEIAR
                     GQSDIPWRAMLVTMIVMCLVMGVVFGLATGYHVMGTDQTGNDVLWRALKSVRTAWVIG
                     TLTTVAMLPPALIFGLAAGYFKGWVDDVIQYIYTTLTAIPGVLLIAAAVLMMQVYIDT
                     HPDLFPTSAQRADLRLFLLCMILGLTGWAGLCRLLRAEALKLRELEYVQAARAFGISH
                     LTVMLRHLLPNVMHIVLITVVLEFSALVLYEAVLSYLGIGVDPTMNSFGTMIDKSRLE
                     MSRDPMIWWNLLAAFVFMLAMVLAANLFADGVRDAFDPRSQSFRPTRRSRLMAMLKKG
                     ST"
BASE COUNT          785 a          940 c          806 g          633 t
ORIGIN      
        1 gaccgcttcg cgtagatggg acaagagctc cgcctgaatt ttttgtaatt cagctgggat
       61 gggagtgtgc gtgtttctca tggctgtagt agccacaggc tggtgcgacg cgccctcgcc
      121 tgcctgcagt tcagctgctg gcaccaatgt acgcgatgaa ttaattcgtg gcgctgaggg
      181 cattttcttg acctcggcac tttggcacat cgggcacgac aagagaccac gcgcttgctg
      241 cgcatcaaag tcatcgtgcg aaccaaacca accctcaaag atatggccag catcacactg
      301 taggttaaag accttaaacg acatgatagg taacttggtt cagtcctaag aacatcaaac
      361 tcaagtatag cgagttcgca gaccgacaca gcgatatacc ttgctaggtg ctttgctagg
      421 tatttagcta agtactgtgc taggtgcgct gctcaaacga cagtcgtggc accgcgtgca
      481 acaaacgctt ggtaacagca tgtttgggct catgcaacac atcggccgcc agtcccatct
      541 ctaccaactc accggcgtcc ataatcgcga tatcgtcggc aaagtactcc acgacgccaa
      601 agttgtgggt aatgaacaaa tacgccatgc ccgactcacg ttgcaagtca ttgagcaggt
      661 caagaatctg agcttgcacc gacacatcca atgcggaggt cggctcatcg aggatcaaca
      721 ccttgggttt aacggccagt gcccgggcaa tggcaatacg ctggcgctgc cccccagaga
      781 actcatgcgg ataacgcgtg gccgcatcgg tgggcagccc gacccgatca agcagatcaa
      841 gcacacgctt ttgtcggtca tctgcgcgca tgtctggcaa caaagccgcc acgccctctt
      901 gcaagatttc tcccacgcgc atgcgcggat caagcgaagc gaacgggtct tgaaaaacaa
      961 tttgaatctg ggtgcgaagc gccttcagtg cagcaccttt ggcagcaaac aaatcttgcc
     1021 caccaagcct gacatcaccg ctaaataccg cggtgccatc aagtagtcgc agcagtgttt
     1081 tagccacggt tgtctttccg cagccagaac caccaagcaa agccaacgtt tgaccaacac
     1141 gcagctcaaa gttcacgcca tcgaccactt gcgtgacacc caccaaacgc cgcaaccacc
     1201 cgcgccgaat cggatagccg acacgcaaac cctggactgc caagaccact tcagacgatt
     1261 ggtctgagtt gtcagtgacc tcgcctgcgg ctgcacgggc ttgctgccca acggctgaca
     1321 aaggcttgcc gcgcttgtca aatgtcggga tggcgtcaaa caactcgcgc gcataagggt
     1381 gtttggggga tttaaaaaac tcagcggctg gcgcggtatc cacaatctcc ccatgacgca
     1441 tcaaagcgac cgtgtcagcg acctggtaga caatggccaa gtcgtgcgtg atcatcagca
     1501 ccgccatgcc gagttctttc tgaatatcgg ctaagagctc cagaatctgc gcttgcaccg
     1561 tgacgtctag tgccgtggtg ggctcatcgg ccacgagtag atcaggttcg gccgccaagg
     1621 ccatggcaat catgacacgt tgcttttgtc cgccagagaa ttgaaatggg tagtggtcga
     1681 tgcgcagctc aggctctgga atgcccactc tgttgagcca gtgaatggcc cgctcgcgcg
     1741 ccgcctgccc gcgcagtgcc gtgtgcgctt gaatggtctc aagcagctga tcgccaatac
     1801 gcatgaccgg attcagactc gtaccaggct cttgaaatat cattgacacg cgtgcgccac
     1861 gcacttgctg catggccatc tcggtcaagg cattgatgtt ttgtccgtca agtaagacgt
     1921 cgccctgcac cacttgcagc gcctcaggca acaagcgcat cagcgccaaa gcggtcatgc
     1981 tcttgcctga cccagactcc cctaccaaag caaaggtttc acctcggtgc acagtcaacg
     2041 caagctgttt aacggcaaat ttcaattgct catcgtgatc aatcgcgatc gacaagtctg
     2101 agacttcaag cacgatgttc tggtcagtca tcatcttctt gtccgcagcc attaggtgct
     2161 cccttttttg agcatggcca taagccggct gcgacgcgtg ggcctaaagc tttggctacg
     2221 cggatcaaag gcatcacgca caccatcggc aaacagattg gccgcgagca ccatggccaa
     2281 catgaacaca aaggcagcca gcaagttcca ccaaatcatg gggtcacgtg acatctctaa
     2341 gcgagacttg tcgatcatgg tgccaaatga attcatggtc ggatccacgc caatacccag
     2401 ataagacagc accgcctcat aaagcaccaa ggcagaaaac tccaggacca cggtgatcag
     2461 cacaatgtgc atgacgttgg gcagcagatg acgcaacatg accgtcaggt gcgaaatccc
     2521 gaacgcgcgc gccgcttgca catactccag ctcccttaac ttcaacgctt cggcacgcag
     2581 gaggcgacat agcccggccc agcccgtgag tccgagaatc atgcatagca agaacaaacg
     2641 caaatctgca cgttgtgccg aggttggaaa cagatccggg tgggtgtcga tatagacctg
     2701 catcatgagc accgctgcgg caatgagcaa cacccccggt atggcagtca gtgtggtgta
     2761 gatgtattga atgacatcat caacccagcc cttgaagtac ccagccgcta acccaaagat
     2821 caacgccggt ggcaacatcg ctaccgtcgt taaggtccca atgacccaag ccgtgcgcac
     2881 gctctttaaa gctcgccaca aaacatcatt acccgtttga tcggtaccca tgacgtgata
     2941 gccagtggct agaccaaaca ccacacccat caccagacac atcacgatca tggtcacaag
     3001 catggctcgc cacgggatat cggactgacc tcgcgcgatt tccgaggcga cttgcgtcca
     3061 gggcattgac tgcattgact ggatcgactg accacggcgg cgccgcgagc gggtaattaa
     3121 cgccaatacg atggccaaca atatcgctgc agttgccagt ccgc
//
LOCUS       DATBNL010000524         5196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_95978, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000524 DATBNL010000000
VERSION     DATBNL010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95978"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VIC30_09075"
     CDS             <1..492
                     /locus_tag="VIC30_09075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017876909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7804567.1"
                     /translation="SSPGRGFKVAMQTLDVFRASVGAAALGFAQAAATMAMDRAEQRQ
                     MFGTTLADMQITQAAIGQLATEIDAAALLVYRAAWQRDVLKQRTTRTAAMAKLYATES
                     AQRVIDRNVQIHGGLGVKVGHPAEMLYREIRALRIYEGATEIQQVVIARDTMRDRPQG
                     DLS"
     gene            489..2051
                     /locus_tag="VIC30_09080"
     CDS             489..2051
                     /locus_tag="VIC30_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007839204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEY7804568.1"
                     /translation="MNGSQAMVKTLLAGNVDVCFANPGTSEMHFVAALDQATEMRCVL
                     GLFEGVVTGAADGYYRMAGKPAATLLHLGPGLGNGLANLHNARKARSGIVNVIGQHAL
                     DHIHNDAPLNSDAEGVARPMSNWVRTITTATQAPMDTAEAISQAKSAPGRIASLILPA
                     NCAWESADAGHYDFSPAREPAAVLGDTVEAVAALLMKPETASRVVLLLGGSALFEQHT
                     KLAGQIAAKTGCQVLSEPRSPRLQRGRGRVNIKPIPFAVDAAVETLKDADHLVLIGST
                     VPVAFFAYPNKPRLTLPADCAVHALATAGHDLLATLEALCDAVNANGTEPAYLSTSSA
                     PLSYDDGFPTVATIGPVLSRALPENAILIDEAVTSGRQLADSVPYFAPHDCIDITGGA
                     IGFGLPAAVGAAVAAPDRRVVALIGDGSAMYTIQSLWTMAREQLDVTVVIFDNRSYRI
                     LRGELNNMGGPEPGVNASRMLDLDGPELNWPAMALAHGVPGVAVDTLSGFEQALNRSN
                     ETPGPSLIALRI"
     gene            2139..3197
                     /locus_tag="VIC30_09085"
     CDS             2139..3197
                     /locus_tag="VIC30_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HEY7804569.1"
                     /translation="MKCYCITQFSQPLELIERQKPEPKGTEVLLKTRAAGVCHSDLHI
                     WEGGYDLGHGKRLSLTDRGIALPLIMGHETVGTPVAMGAEARGVEPGKNYLVYPWIGC
                     GTCDVCIAGQENYCATPRSLGVYTDGGYADHLIVPHPRYLLDIGSLNPATTAPHACSG
                     LTTYSALNKLDPEIYTKRPILILGAGGLGLMAIEILRAMGGHGAIVVDIDPVKLQAAK
                     DAGALATVNGNDSDALQQILAANGGQPLQAAVDLVGSATSTELGFNALRKGGSLIIVG
                     LFGGASPWPLAFIPMRAIRIQGSYTGSLGELEALLALVKSGKVNPIPVTTHELNEASD
                     VLHALHEGRVVGRAVLVD"
     gene            complement(3203..3862)
                     /gene="recO"
                     /locus_tag="VIC30_09090"
     CDS             complement(3203..3862)
                     /gene="recO"
                     /locus_tag="VIC30_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018026409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEY7804570.1"
                     /translation="MSKRVPRVTDAPAFVLQSTAWRETSLIVKVFAHHHGVVTLVAKG
                     AKRPYSGLRAVLMPFQPLMLSWTGAAEVKTLTHAEVVRVRPLAGSVLMSCWYMNELLL
                     RLLAAEDPHPGLYLAYEQAIDALAEGRTNGQAIGQASAQTTAAVLREFEWRMLQETGY
                     GLEGPAPDFADRAQGGDLKEQLQQRLLEHVPGGRLNSREVMLSLRRLMTEAPQGSVNI
                     S"
     gene            complement(3855..4787)
                     /gene="era"
                     /locus_tag="VIC30_09095"
     CDS             complement(3855..4787)
                     /gene="era"
                     /locus_tag="VIC30_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003821362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEY7804571.1"
                     /translation="MTNTDSDTPPNTTPDTHTDYRCGYVALVGRPNVGKSTLSNALIG
                     SKISITSRKAQTTRHRITGVLTREDAQFVFVDTPGFQTRHGGAMNQMMNRVVSQTLAE
                     VDVVLFLVQAGQWTAADESLLALLPKESAVILVLSKTDLIKDKGRLFPFTAEVAARFP
                     FAAVVPVSAVKGKQLDDLLGEIAPRLPHNEPYFDEDTLTDRPMRFLVAELIREKIFRL
                     VGDELPYGCTVVIEQWDETDDHATINACVIVQRESHRPILLGAKGVHMKRIASEARQD
                     IAKLLDKPVHLEVYIKIKRGWTDRQSNLREFGYE"
     gene            complement(4784..>5196)
                     /locus_tag="VIC30_09100"
     CDS             complement(4784..>5196)
                     /locus_tag="VIC30_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative dsRNA-binding protein"
                     /protein_id="HEY7804572.1"
                     /translation="GAIYREGVFEKVQAVTHRLYEPIVKSIDPQTIGKDAKTLLQEFL
                     QAHKLALPSYSVVATHGAAHSQQFEVMCDIAELDVHVQAAGASRRAAEQTAARQALEK
                     AMAAKPAGRARKAVKRARKAAQLSLPVAVSQDAR"
BASE COUNT         1126 a         1517 c         1420 g         1133 t
ORIGIN      
        1 tcgtcgcctg ggcggggctt caaagtggcg atgcagacac tcgatgtgtt tagagcgtca
       61 gtcggtgcgg ccgctttggg ctttgcacaa gcggctgcca ccatggccat ggatcgcgcc
      121 gagcagcgtc aaatgtttgg aacaacgttg gccgacatgc aaattacgca ggctgccatc
      181 ggtcaattgg ccactgaaat cgatgccgct gcactgctgg tttatcgagc ggcttggcaa
      241 cgcgatgtat taaagcaacg caccacgcga acagcggcca tggccaaact ctatgccacc
      301 gaatcggctc agcgcgtcat tgaccgcaat gtgcagattc atggtgggct tggtgtcaaa
      361 gttgggcacc ccgccgaaat gttgtatcgg gaaatccgcg cgttgcgtat ttacgaaggc
      421 gccactgaaa ttcaacaagt ggtcatcgcg cgtgacacca tgcgtgatcg accacaggga
      481 gacttgtcat gaacggctca caagccatgg ttaaaacgct gcttgccggc aacgtcgatg
      541 tctgtttcgc caatccaggg acgtctgaaa tgcatttcgt ggccgcgctt gaccaagcca
      601 ccgagatgcg ttgcgtactt ggcctatttg aaggcgtggt caccggcgcg gccgatggtt
      661 attaccgcat ggccggcaaa cccgcggcca ccttgttgca ccttggccct ggattgggca
      721 atggcttggc taacctgcac aacgcccgta aagcacgctc tggcattgtc aatgtcattg
      781 gccaacacgc actagaccac attcataacg atgccccgct gaactctgat gccgagggcg
      841 tggcacgccc gatgtccaat tgggtgcgca cgattaccac cgccacacaa gcaccgatgg
      901 atacggctga agccattagc caagcaaaaa gtgcaccggg tcgtatcgct tcgctcatac
      961 tgcccgccaa ttgtgcgtgg gagtcagccg atgctggtca ttacgacttc tcgccggcac
     1021 gcgaaccggc tgccgtactt ggcgacacgg tcgaggcggt tgccgccttg ctcatgaagc
     1081 ccgagaccgc tagccgtgtg gtgttgcttt tgggtggcag cgcgctgttt gagcagcaca
     1141 ccaagcttgc cggacagatc gccgctaaaa ccggctgcca agtgttgtct gagccacgta
     1201 gcccacgcct gcagcgcggc cgcgggcgcg taaacatcaa acccattccg tttgctgtcg
     1261 atgccgcggt cgagacgcta aaagacgctg atcatctggt gctcatcggc agcaccgtgc
     1321 ctgtggcgtt ttttgcgtat ccgaataagc cgcgcttaac gctgccggct gactgcgcgg
     1381 tgcatgcgct agctaccgca ggacatgact tgcttgccac gttagaagcc ctgtgtgatg
     1441 ccgttaatgc caacggtacc gaacctgcgt acctatcgac gagttctgca ccactgtcat
     1501 acgacgatgg gttcccgacg gttgccacca ttggccccgt gttgtctcgt gctctaccag
     1561 aaaacgccat tctgattgac gaggccgtga cctctgggcg ccaactcgct gatagcgtgc
     1621 cctactttgc gccacacgat tgcattgata tcacgggcgg tgcaattggc tttgggctgc
     1681 ctgccgccgt tggcgcggca gtagctgctc ccgacaggcg ggtggtagcg ctcatcggtg
     1741 atggcagtgc catgtacacc attcaatcct tgtggaccat ggcacgcgag caactcgatg
     1801 tcacggtggt gatattcgat aaccgctcgt atcgcatctt gcgtggtgaa ctcaacaaca
     1861 tgggcggacc cgagcccggg gtcaacgcca gccgcatgct tgaccttgat ggccctgagt
     1921 tgaactggcc ggccatggcg ctggcgcacg gcgtaccggg cgtggctgta gacaccttga
     1981 gcggcttcga acaagcgctt aaccgatcta acgaaacacc gggtccgtca ttgattgctc
     2041 tgcgaatcta agccacactg caaaatacac tgtaaaacac actacaaaac acctgcaaaa
     2101 cattaataag caaacaccga aaccgaggag aactcaacgt gaagtgctac tgcatcacac
     2161 aatttagcca gccgctagaa ctgatcgagc gccagaaacc cgaacctaaa ggcaccgagg
     2221 tgcttcttaa aactcgggcc gccggtgttt gtcacagtga cttacatatc tgggaaggcg
     2281 gctacgactt agggcacggc aaacgactgt cattgaccga tcgtggcatc gcgctgccac
     2341 tgatcatggg tcacgaaacc gtcggcaccc cagttgccat gggggctgaa gcacgcgggg
     2401 tcgaacccgg taaaaactat ctggtgtatc catggatagg ttgtggcacc tgcgacgtat
     2461 gcatcgctgg ccaagagaac tactgcgcca cgccgcgttc gttgggtgtc tacaccgacg
     2521 gtggctatgc cgaccacttg atcgtgcctc acccgcgcta tctgcttgac atcgggtcgc
     2581 tcaatcccgc caccactgcc ccacacgcct gctctggcct gacaacctac agcgctctga
     2641 acaagctcga tcccgagatc tacaccaaac ggccgattct gattctcgga gcgggtggac
     2701 ttgggctgat ggccattgag attttgcgtg ccatgggcgg ccatggcgcc atcgtggttg
     2761 atattgaccc agttaaatta caagcagcta aagacgcagg tgctttggcc acggtcaacg
     2821 gcaacgacag cgatgcactc caacaaatcc tcgctgccaa cggtggtcaa cccttgcagg
     2881 cagccgttga tctcgttggt tcagccacat caacagaact tggtttcaat gcgctgcgca
     2941 agggtggctc cttgatcatt gttggtctgt ttggcggtgc ctcaccgtgg cctctggcgt
     3001 ttattccgat gcgcgcgatt cgcattcagg gcagctacac cggctcgctc ggggaattag
     3061 aagcgctact cgcactggtc aaatccggca aggtcaatcc cattcccgtg acaacccatg
     3121 agttaaacga ggcaagtgat gtgctccatg cgctgcacga gggtcgtgtg gtcggacgtg
     3181 cggtgttggt cgactaactg cctcaggaga tgttgacaga cccctgcggc gcttcagtca
     3241 tcaagcgtcg cagactcaac atcacctcgc ggctgttgag gcgtccgccg ggtacgtgct
     3301 caagcaaccg ttgctgcaac tgctctttta aatcgccgcc ttgcgcgcga tcagcaaaat
     3361 ctggcgctgg cccctcaagg ccgtagccgg tttcttgcaa catgcgccat tcaaattcgc
     3421 gtagtacggc tgctgtggtt tgagcactgg cttgaccaat agcttgtcca ttggttctac
     3481 cctcagccaa cgcatcgatc gcctgctcgt aagccaaata tagacctggg tgtggatctt
     3541 cagccgctag tagacgtagc aacaactcat tcatgtacca acaggacata agcactgaac
     3601 ctgccagtgg tcgcactcgc accacttcgg catgcgtcaa ggttttaact tccgcggccc
     3661 cagtccaaga caacatcaat ggctgaaacg gcatgagtac cgcacgcaga ccggaataag
     3721 gccgttttgc gcctttggca accaaggtca ccacgccatg gtggtgagca aacactttca
     3781 cgatgagtga tgtctcgcgc caggccgtac tttgcaacac aaatgccgga gcgtcggtga
     3841 cacgtggcac gcgtttactc ataaccaaat tcgcgcaaat tgctttgacg atcggtccaa
     3901 ccgcgtttga tcttgatgta gacctcaagg tgcacgggct tatcaagcag cttggcaata
     3961 tcttggcgtg cttcagaagc gatgcgcttc atgtgaacac ctttggcacc gagcaaaata
     4021 ggccgatgcg actcacgctg tacgatcacg caggcattga tcgttgcatg gtcatccgtt
     4081 tcatcccatt gctcaataac caccgtgcaa ccgtagggca actcgtcacc cacgagacga
     4141 aagatttttt ctcggatcaa ctctgccact agaaaccgca tgggccggtc agtcagtgtg
     4201 tcctcatcaa aataaggttc attgtgcggc aggcgtgggg cgatttcacc gagcaaatcg
     4261 tcgagctgct tgcctttgac ggcactaacc ggcacgaccg ccgcgaacgg gaatcgcgcc
     4321 gccacctctg cggtgaacgg aaacaaacgc cccttatctt taatgagatc ggttttagac
     4381 aacaccagaa tcaccgccga ttctttcggc agcaatgcca gcagcgactc gtcagcagcc
     4441 gtccactgcc ccgcttgcac caggaataaa accacatcga cttcagctag cgtttgcgag
     4501 accacacgat tcatcatctg attcattgcg ccaccatgcc gcgtttggaa acccggcgta
     4561 tccacgaaca cgaattgagc gtcctcacgc gttaaaacac cggtgatgcg atgtcgagtc
     4621 gtctgtgcct tgcgcgatgt gatggagatc ttgctgccga tcagtgcgtt gcttagtgtt
     4681 gacttaccga cgttggggcg acccacaagg gcgacgtaac cacagcggta atcggtatgg
     4741 gtatcgggcg ttgtattggg cggcgtatcg ctatcggtgt tagtcatcgt gcatcctgcg
     4801 aaacagccac tggcaggcta agttgtgcgg ctttgcgggc acgtttgact gctttacgcg
     4861 cacgccctgc tggtttggcg gccatggctt tctctaatgc ctggcgcgct gctgtttgct
     4921 cggccgcgcg tcggctagca cccgcagcct gcacgtgcac gtcaagctca gcaatatcgc
     4981 acatcacctc aaactgctga ctgtgcgccg ccccatgggt ggcaacgact gaataggatg
     5041 gcaacgctag tttgtgcgcc tgcaaaaact cttgcaacaa ggttttagcg tccttgccaa
     5101 tcgtttgtgg gtcgatggat ttaacaatcg gttcgtataa gcggtgcgta acggcttgca
     5161 ctttctcaaa aacaccctcg cgatagatgg caccaa
//
LOCUS       DATBNL010000525         1717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_145979, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000525 DATBNL010000000
VERSION     DATBNL010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145979"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..809)
                     /locus_tag="VIC30_09105"
     CDS             complement(<1..809)
                     /locus_tag="VIC30_09105"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY7804573.1"
                     /translation="MLSLVKQARRFMRFGVLAGVVLLAGCTVGPDYERPTIDLGESFG
                     QLQDNPGWMPAKPGTPGFNQQWWTIFNDQVLDGLMQTLNAQNLSIEQAQAQYDQALTN
                     VRSANASLYPTLGANAGATRSDAPMVLPGSSTVVGGSGAYTEYDASLGLSWELDLWGG
                     IRRGIESAQASAQASAADLAGAKLSAQAALASTYYQLRVLDVQADLLDSTIVSNARSL
                     ELTKNLQRAGLTDKGDVAVAQTQLDTVRAQRLDIQWRRAQLENAIAVLLGQ"
     gene            complement(829..1578)
                     /gene="zapD"
                     /locus_tag="VIC30_09110"
     CDS             complement(829..1578)
                     /gene="zapD"
                     /locus_tag="VIC30_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HEY7804574.1"
                     /translation="MRFEYPFNERVRSWMRLEYLLDRLKFFSEPGDARLHQVALSALF
                     DVLDATERTDVKGGIMQDLERQKTTLSALQDHPGVNAQALSEVIKEIDQAHIALSNQG
                     RTGQSLRDNDWLTSLRGRLAVAGGGTQVDMPSFHAWQCQDDAMRCADLRGWVEPLLPL
                     DQGISLVMRLLRQSGEPSDDIARQGAYQQMLGGKSYQLLRVWLEPEHGVFPEMSANKY
                     MVWVRFAEQLGQSKPQPVQRDIPFRYALCAL"
BASE COUNT          402 a          517 c          446 g          352 t
ORIGIN      
        1 tactggccca acaacaccgc aatggcgttt tctaattggg cgcggcgcca ctgaatatca
       61 agccgctgcg cacgcaccgt gtctaactgg gtctgggcca ccgcgacatc acctttgtcg
      121 gtgagaccgg cgcgctgtaa atttttagtc agctctagcg accgcgcatt cgaaacaatg
      181 gtgctgtcga gcaaatctgc ttgcacatca agcacgcgca actggtaata ggtgctggca
      241 agtgccgcct gggcgctaag tttggcacca gccaagtcag ccgcactggc ttgggccgaa
      301 gcttgtgctg actcaatgcc gcgacggata ccgccccaaa gatcaagttc ccaactcaac
      361 ccgagactgg cgtcgtactc cgtgtaagcc ccagagccac caaccacagt cgatgagcca
      421 ggtagcacca tgggtgcatc agaacgggtc gcacccgcat tggcacctag tgttggatat
      481 aaggaggcgt tggcgctacg cacgttggtc agggcctgat cgtactgcgc ctgcgcttgt
      541 tcgatactca gattctgtgc gttgagcgtt tgcatcaacc catcaagcac ctggtcattg
      601 aatatggtcc accattgctg gttaaatcct ggcgttcctg gcttggctgg catccagcca
      661 ggattgtctt gcagttgtcc gaagctctca cccaaatcga tggtggggcg ctcatagtcg
      721 gggcctacgg tacaaccagc cagcagaacc acgcccgcaa gcacgccaaa ccgcatgaac
      781 cgacgtgcct gcttaacaag actcaacatc cgacactacc tgaagaaatt aaagcgcaca
      841 cagcgcgtat cgaaacggga tatcacgctg caccggctgg ggcttggact gaccgagctg
      901 ctcggcaaac cgcacccaaa ccatgtactt attggcgctc atttcgggaa aaacaccgtg
      961 ctctggctca agccagaccc gcagtagctg ataagactta ccaccgagca tctgttgata
     1021 agccccttga cgtgcgatgt cgtcagacgg ctcgcctgac tgacgcaaca ggcgcatgac
     1081 caacgagata ccctgatcga gcggcagcaa tggctcaacc cagccgcgca gatccgcgca
     1141 gcgcatggcg tcatcctgac actgccaagc gtgaaacgaa ggcatgtcca cttgggtgcc
     1201 accaccggcc acagccagtc tgccacgcaa actggttaac cagtcattgt cacgcaagct
     1261 ttgacccgtg cgcccctgat tggacaaagc gatgtgtgcc tggtcgatct ctttgatgac
     1321 ctcggacaat gcttgggcgt tcacgccggg gtgatcttgc agagccgaca aagtggtttt
     1381 ttgtcgttca agatcctgca tgatgccgcc cttgacgtcc gtgcgctcag tggcatcaag
     1441 cacatcaaac aaggcactta aggccacttg gtgcaggcgt gcatcaccag gctcagaaaa
     1501 aaacttgagc cgatccagca agtactccag gcgcatccag gaacgtactc gctcattaaa
     1561 ggggtattca aagcgcatgg tcacttagcg ctcgtcatct attttagtca tcccgctagg
     1621 ttacaccagc gttggtgcaa acccaacacc tgtgacttaa gcccctgcaa agtcatgtga
     1681 gcgccatttt cgataacgtc gtctgcgcaa accagtc
//
LOCUS       DATBNL010000526         1761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_125839, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000526 DATBNL010000000
VERSION     DATBNL010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125839"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VIC30_09115"
     CDS             <1..295
                     /locus_tag="VIC30_09115"
                     /inference="COORDINATES: protein motif:HMM:NF021453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HEY7804575.1"
                     /translation="FSHSDRHLAIGKAFALAGCGIGLAVWYLGFAVIGAEYFAMWASD
                     WNGQATAYSFSAILLLSMIYVAQPEAGATASAPTPSPNPLHSDLTPDESDHDR"
     gene            285..635
                     /locus_tag="VIC30_09120"
     CDS             285..635
                     /locus_tag="VIC30_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018417470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY7804576.1"
                     /translation="MTDKVVGQPSSGNLFESLPKQQAEEEFETLFNHPNVRIERIVST
                     GQCSGPGFWYDYPHAEWVLLMQGQAELQFENESSPTKLSAGDYICIDAHRRHRVVFTQ
                     ADPTTVWLAVHLGA"
     gene            complement(686..1474)
                     /locus_tag="VIC30_09125"
     CDS             complement(686..1474)
                     /locus_tag="VIC30_09125"
                     /EC_number="1.13.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008903280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol ring-cleavage dioxygenase"
                     /protein_id="HEY7804577.1"
                     /translation="MSPTPTAPALFISHGAPTFALEPGELGRALGALGQRLQEVRGIV
                     AVSAHWQTSELRVANTEQPDTIHDFYGFPPALYALRYPASGSAEITQLVMQALHASNL
                     AVQLDGTQGMDHGVWVPLLHLRPQADIPVVCVSLPESATPHSAWQLGQALAKLRQDGV
                     LIMGTGSLTHNLSEFRGQGRTDTAPYVTAFTTWIQTQIESRNLAALCQYRTLAPEAER
                     AHPTEEHLLPLFVALGASSDTDAFDVLATEVRDGMLSMASYHWH"
     gene            complement(1471..>1761)
                     /locus_tag="VIC30_09130"
     CDS             complement(1471..>1761)
                     /locus_tag="VIC30_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007859314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY7804578.1"
                     /translation="IGLPLAGIAAVIAIAVEVVGGAALVAGLFTRTAAIVLAIFTVVA
                     SVFFHAYWAVPADQAFMQQLLFYKNIAVAGGLLILAAHGAGAFSVDHKRARQ"
BASE COUNT          390 a          483 c          499 g          389 t
ORIGIN      
        1 ctttagtcac agtgaccgcc atctggccat tggcaaagcg tttgcgttgg ctggttgcgg
       61 gatcggcttg gcggtttggt acctgggttt tgcggtcatt ggtgcggagt acttcgcgat
      121 gtgggcgagc gactggaatg gacaggccac ggcgtattcg ttttctgcga ttttgttgct
      181 gtcgatgatt tatgtggccc agcccgaggc cggtgcaact gcctctgccc ctacccctag
      241 ccctaacccg ctccattcag atctgacgcc agacgaatcc gaccatgacc gataaagtgg
      301 tgggccagcc atcaagcggg aacttgtttg agagcttgcc caagcagcag gctgaggaag
      361 aatttgaaac cctgtttaat caccccaacg ttcgcatcga gcggatcgtc tctactgggc
      421 agtgcagtgg gccaggtttt tggtatgact atccacatgc tgagtgggtt ttgttgatgc
      481 aaggccaagc cgaactgcag tttgagaacg aatcaagccc caccaaactg agtgcgggtg
      541 actatatttg catcgatgcg catcgtcgcc accgagtcgt gttcacgcaa gccgatccaa
      601 cgacggtgtg gttagcagtc catttaggcg cttaatccac accgcgccaa cactgagggg
      661 atcaatatcc acgtgtatca accaatcagt gccaatggta cgaggccatt gaaagcatgc
      721 cgtcgcgcac ctcagtggcc agtacatcga acgcgtcggt atctgagctt gcgcccaatg
      781 ccacaaacaa tggcagcaag tgttcttcgg tcgggtgagc gcgttcagcc tctggtgcta
      841 acgttcggta ctgacaaagc gccgcgaggt tgcggctttc aatctgtgtc tgaatccaag
      901 tagtgaatgc ggtgacataa ggtgccgtat ctgttcggcc ctgaccacgg aactcactta
      961 agttatgcgt caaactacct gtgcccatga tcaagacacc atcttgcctt agcttcgcaa
     1021 gtgcttgtcc gagttgccaa gcactgtgcg gtgtggcgct ctcaggtaaa gatacgcaga
     1081 ccaccgggat atccgcttgt ggtcgcaggt gtagcagtgg cacccaaacg ccatggtcca
     1141 tgccttgcgt gccatcgagt tgcacggcca agttcgaggc gtgcagtgcc tgcatgacca
     1201 attgcgttat ctcggctgat cctgatgccg ggtagcgcaa agcatatagc gccggtggga
     1261 aaccatagaa atcatgaatg gtgtcaggct gctcagtgtt ggcgacgcgc aattctgacg
     1321 tttgccagtg agccgatacc gccacgatgc ctcggacttc ctgtaggcgt tgtccgagtg
     1381 cgccaagcgc acgcccgagc tcgcccggct cgagtgcaaa cgttggcgcg ccgtgggaaa
     1441 taaaaagtgc cggagcagtt ggtgtcgggc tcattgacgg gctcgcttgt gatcaacgct
     1501 gaacgcacca gcaccatgcg ccgctagaat cagcaggccg ccagccacag cgatgttttt
     1561 atagaagagt aactgttgca taaacgcttg atccgctggc acagcccagt atgcatggaa
     1621 aaacacgcta gctaccacgg tgaagatagc caacacgatg gccgctgtgc gcgtaaacaa
     1681 accagcaacg agtgctgcac cacccacgac ttcgactgcg atcgcaatca cggcagcaat
     1741 tccggctagt ggcagtccaa t
//
LOCUS       DATBNL010000527         1560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_16493, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000527 DATBNL010000000
VERSION     DATBNL010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16493"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..971)
                     /locus_tag="VIC30_09135"
     CDS             complement(<1..971)
                     /locus_tag="VIC30_09135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804579.1"
                     /translation="MAKYDIHLLADFCRTSQEKQIVEALQRGLSQREAGRLLEIPERT
                     LQRRVANLRKLAARQGHAPEHDMVKTCPDGFFVKGVSTLYTNGEDGTQISAQWVKTQA
                     DAQRQEELIKEAVEAWCDEAKGKIKPVKLKQVEHDADLLTIYPLGDPHFGMFAWGEET
                     GKDFDLKIAEGQLFAAIDYLVDKSPASKRGVLCNLGDMFHSDNMDGVTARSGHSLDMD
                     GRLQKVIQVGVRALRRCIHRMLEKHETVEVVNAPGNHDHVLALALNVMMANIYENEPR
                     VTVHSAPTMRHYIQHGKVLSGVVHGHQTRDNDLGAIMATEKPQEWGQT"
     gene            complement(1029..1364)
                     /locus_tag="VIC30_09140"
     CDS             complement(1029..1364)
                     /locus_tag="VIC30_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804580.1"
                     /translation="MRQDLANWGAWSRAGSTLRLGYTSMSWDRKSQGELYDSDAALKA
                     EAVLTGWYQASELAAQRVFVLKLVYVEQRSNLQIVPHFKRKFKRLSDESEIGSLADAS
                     EFYYWVLTR"
BASE COUNT          349 a          454 c          365 g          392 t
ORIGIN      
        1 gtctgacccc actcttgcgg tttttcggtc gccataatag cgcccaagtc attgtcacgg
       61 gtttgatggc cgtgaaccac gccactcagc actttgccat gctggatgta gtgacgcatt
      121 gtgggtgcgc tgtgtaccgt caccctcggt tcgttttcat agatgttagc catcatcacg
      181 ttcagcgcaa gcgcaagcac atggtcatgg ttgcctgggg cattgacgac ctcgaccgtt
      241 tcatgctttt ccagcatgcg gtggatgcaa cgcctaagcg ctcgcacccc gacttgaatg
      301 accttctgca aacgcccatc catgtctaag ctatggcctg agcgtgctgt gaccccatcc
      361 atgttgtcac tatggaacat atcacccaga ttgcacaaca cgccacgctt gctggctggc
      421 gatttgtcca ctaggtagtc aatggcggca aacagttgac cttcggcaat tttcaaatca
      481 aagtctttgc ctgtttcctc gccccatgca aacatgccaa agtgtgggtc gcccagaggg
      541 tatatggtca gcaggtcggc atcatgctca acctgcttca gcttcactgg cttgatcttg
      601 cctttggctt cgtcacacca agcctcaacc gcttctttga tcagttcttc ttggcgttgc
      661 gcgtcggctt gagtcttgac ccattgtgcg ctgatctgtg tgccatcttc gccattggtg
      721 tataaagtcg agacgccctt gacgaaaaac ccatcagggc aagttttcac catgtcgtgc
      781 tcgggcgcat ggccctgacg cgccgccagc ttccgcagat tcgcaacccg ccgttgcaaa
      841 gtccgctcag gtatttccaa caaccgaccc gcttcgcgtt gcgacaagcc gcgctgtaaa
      901 gcctctacaa tttgcttttc ttgggaggta cggcagaagt cggccaacag gtgtatgtcg
      961 tatttggcca taggattatc tcaggcactt ttgcccagaa tagactctgg aattgtaaca
     1021 tagagaaatc atctcgtcaa tacccagtaa taaaactctg aagcgtcagc taaactgccg
     1081 atctcagact catcagaaag ccgtttgaac tttcgtttga agtgtggcac gatttgcaaa
     1141 ttggaacgct gctcaacgta caccagtttg agcacaaaga cccgctgagc ggccaattct
     1201 gaggcttgat accatcccgt cagaactgct tcggctttca aagccgcgtc agaatcatac
     1261 aactcgccct gagatttccg atcccacgac atgctggtat acccaagacg caaagtgctg
     1321 ccggcgcgac tccaagcacc ccaattggcc aaatcttgtc tcacaacggc ccgcaattca
     1381 ggcgaattgt cccactgact tcggagatcg tctaagtgca aagtcaacgc gggtctgctc
     1441 gcttacactt caaaccagat atcaatctgt tcgtcgatcg ctctcatgat acactcaacc
     1501 aaaaccgcgt ggctcgggtc atctgtgtgc ttgtacgcgc gacgaagccc gatttcaatc
//
LOCUS       DATBNL010000528         2004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_184405, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000528 DATBNL010000000
VERSION     DATBNL010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184405"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1055
                     /locus_tag="VIC30_09145"
     CDS             <1..1055
                     /locus_tag="VIC30_09145"
                     /inference="COORDINATES: protein motif:HMM:NF024996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY7804581.1"
                     /translation="KTRIGMDTGVQSGSRWGLRGSDALGDGWKASFVLEGGISSLTGE
                     DGQGGRAFGRRAVLGLSQASYGDLIAGRQTTISTNYFGAIDPLYLSFGQANMGASFGS
                     VNTVRYDSLIQYQTPTWAGLQAGIGYSFNTGNTGLYASDGTPVLAPKSDYFESSANMR
                     ALTAAIQFDQGPVGLAASYDRIFAAGQIPAPSGSGSISNSDGAAPTAWILGATYDFKV
                     VKVAAAFGRTYDGAISGNGPGNGLSDSGLAIETGGANVLFQSGFDTQSTMVGFTIPMS
                     GPGTQFMFSWQTQQPKGRLASDSNLATQSIFGAAYTYGLSKRTNFYFWGSYGHNFQML
                     SSAKSSVVGAGVRHLF"
     gene            1103..1462
                     /locus_tag="VIC30_09150"
     CDS             1103..1462
                     /locus_tag="VIC30_09150"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY7804582.1"
                     /translation="MNVEQYFPVLIFIIVGTLIGFALITAGSLIGPSRPDAEKLSPYE
                     CGFEAFGDSRMKFDVRYYLVAILFILFDLEIAFLFPWAIANGTVGMVGFTTAMIFLVI
                     LTVGFIYEWKKGALDWE"
     gene            1523..1999
                     /locus_tag="VIC30_09155"
     CDS             1523..1999
                     /locus_tag="VIC30_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEY7804583.1"
                     /translation="MAIDGILKEGFITTSADKVINWAKTGSMWPMTFGLACCAVEMMH
                     AGAARYDLDQFGIVFRPSPRQSDLMIVAGTLCNKMAPPLRKVYDQMPEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGLLQMQNKIRLTNTIAR"
BASE COUNT          424 a          462 c          562 g          556 t
ORIGIN      
        1 ccaaaacacg catcgggatg gatacggggg tgcaaagtgg ttcccgttgg gggttgcgcg
       61 gcagtgatgc attgggtgac gggtggaagg cttcatttgt gctcgaggga gggatcagct
      121 cgttgaccgg tgaggatggg cagggaggac gagcatttgg tcgtcgtgct gtactagggt
      181 tgtcgcaagc gagttacggt gatttgattg caggtcgcca gacaaccata tctacgaatt
      241 attttggggc gattgatccg ctttatttga gcttcggaca agccaacatg ggtgcatcgt
      301 tcggttccgt gaacaccgtg cggtacgata gtcttattca atatcagact ccgacttggg
      361 cgggcttgca ggcgggtatt ggttattcgt ttaacaccgg caacacaggc ctatacgcct
      421 ctgatggaac accggtgctt gcgccaaaat cagactattt tgagtcaagc gccaatatgc
      481 gtgctctgac tgctgccatt cagtttgatc agggaccagt tgggcttgcg gcctcatacg
      541 accgtatctt cgctgctggc caaatcccag caccttcggg cagtggcagc atatcgaatt
      601 cagatggtgc ggcgccgact gcgtggattc taggtgcgac gtatgacttt aaggtcgtta
      661 aggtagcagc agcattcggc cgcacctacg atggtgccat tagtggtaat gggccaggta
      721 atggattatc tgattctggc ttggccattg agactggtgg cgcaaatgta ttgtttcagt
      781 ccgggtttga tacccagtca accatggttg gttttaccat tcctatgtct gggccgggaa
      841 cgcagttcat gttctcttgg cagacacaac agcctaaggg ccgtttggcg tcggattcga
      901 acttagccac acagagcatt tttggggccg cgtataccta tggtttgtca aagcggacaa
      961 acttttattt ctggggatca tatggtcata acttccagat gttaagtagt gcaaaaagta
     1021 gcgttgtagg tgccggtgtg cgccacctgt tttaacgctc gatgatacaa tctcgtggtt
     1081 tctactaatg ccgagctagc cgatgaacgt cgaacaatac tttcccgtct tgatattcat
     1141 catcgtcggc acgttgatcg gttttgcgct gatcacggcg ggttcactca ttggtccgag
     1201 ccgtcccgac gcagaaaaac tttctcccta cgaatgcggt tttgaggcat ttggtgactc
     1261 ccgcatgaaa tttgacgttc gctactacct tgtagcgatc ttattcattc ttttcgatct
     1321 cgaaattgcg tttcttttcc cttgggctat tgcaaatggc actgtgggaa tggtgggctt
     1381 tacgactgcg atgatttttt tagtcatcct gacggttggg tttatttatg aatggaaaaa
     1441 aggcgcgctt gactgggagt aacgttctcg gtggcgagcc tttgcaaagc cctgtggctg
     1501 caagctgaca attggtgaga ctatggcaat cgatggcatt ctcaaagaag gctttataac
     1561 gactagcgct gacaaggtca ttaattgggc taaaacaggc tcaatgtggc ctatgacgtt
     1621 tggcttggca tgctgtgctg tggaaatgat gcacgcaggt gctgcacgtt acgacctgga
     1681 tcaatttggt atcgtgtttc gtccaagtcc tcgtcagtcc gatctgatga tcgtggcagg
     1741 gaccttgtgc aataagatgg cacccccact tcgcaaggtc tacgaccaga tgcctgagcc
     1801 gcgctgggtt ctttctatgg gatcttgcgc caacggcggt ggttactacc attactcgta
     1861 ttccgttgtc cgcggttgtg accgaattgt gccagtcgat gtgtatgttc ccggttgccc
     1921 gcccacggct gaagcgctgg tttatggctt gctacagatg caaaacaaaa tccgattgac
     1981 caacaccatt gcgcgctaat tgcc
//
LOCUS       DATBNL010000529         4471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_175478, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000529 DATBNL010000000
VERSION     DATBNL010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4471
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175478"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..1441)
                     /locus_tag="VIC30_09160"
     CDS             complement(266..1441)
                     /locus_tag="VIC30_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005799406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804584.1"
                     /translation="MWVNAFLLALREIRRHLMRSFLTILGIVIGVGAVVTMVTLGNGA
                     TVMVSERISSLGSNLLVMRPGQRLGAGSERAGAHTFSAQDAQALQEQIFGLKAVAPIV
                     SRAVTLVADNKNWSSSVVGTTNDYLVTGNWTLADGREFSTDEQQAGRSVCIIGETVRR
                     ELFGAINPIGDRIRVRNFDCDIIGLLASKGQAGLGIDQDDRVLMPLLTAQRRLTGTNN
                     VDAILMSVGDIANTQRVIGDIKSLMRERRNLAENVTDNFSVTDTRQIAETLSGTVRVL
                     TGLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGVRMAIGALEREVLLQFLIEAVVL
                     SALGGVVGIVVAFAACYGVTSLMGMPFLFSAAIGVVFGYAPARRAARLNPIDALRHE"
     gene            complement(1432..2208)
                     /locus_tag="VIC30_09165"
     CDS             complement(1432..2208)
                     /locus_tag="VIC30_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019572445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804585.1"
                     /translation="MPEPSQPLITLRGVTKTYGQGAMAFDALKGVDLTIQAGEFVAIM
                     GPSGSGKSTAMNLLGCLDSPTQGQYVLQGVHVEQLTRQQRALLRRHALGFVFQGFNLL
                     SRTSALENVELPLLYRGDSASVRRQKAMQALASVGLAGWEKNTPAELSGGQQQRVAIA
                     RGIVTEPLVLLADEPTGNLDSSRSQEIMDLLTMLNQTRGITVVMVTHEPDMAAYADRI
                     ITFVDGHVSQVSQVSGASSVNAQMPAGASRTEPSGSQPCG"
     gene            complement(2214..3488)
                     /locus_tag="VIC30_09170"
     CDS             complement(2214..3488)
                     /locus_tag="VIC30_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012348708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY7804586.1"
                     /translation="MNKSTERPTTPPTEPKPGTQSPSGNEQPELAAILARGNETGSPR
                     RKLFWWGVIVVMIALGLYFWWGWGRQADVAYVTEPVARGSLVVTATATGTLEPTRTIE
                     VGSELSGTLEDVFVQENDVVEFGELLAVLDTSRLEDAIAKSKASLSSAQAQVLQSDAT
                     VAEARATLTRMQEVFKLSGGKVPSESEIEVAEATLKRAMANLSATKAAVMQAEAEVKT
                     NQTNLQKAQIKSPVNGVVLTREVEPGNTVVAAMSTPVLFTIAEDLRQMELRVSVDEAD
                     VATVSPGQAVSFTVSAWPGRQFPASIERVGLGSTITDNVVTYKTILRVDNDDLALRPG
                     MTATATITTAERGNVLLVPNAALRYRPSDSADDSTDEPLPSGQSRVWRLKGDQPEAVA
                     VTVGISNGRLTEVLSGDLQVGDAVILGQETPE"
     gene            complement(3485..>4471)
                     /locus_tag="VIC30_09175"
     CDS             complement(3485..>4471)
                     /locus_tag="VIC30_09175"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY7804587.1"
                     /translation="SEAALDNIRVSVAAEVAQNYVDLRNSQVRLSIAKRNLASQAETL
                     QIAQWRHQAGLARQTDVAQARASLEQTRASLPDLEIELARANNRLSVLTGQAPGAVNK
                     RLSSVRSTDKSLPSLPNTIATGIPTNVLTQRPDLREAERNLAAETARVGQVTARRYPS
                     LNLGGSIGWTAFTLSGIGPADSLIGVLAGTLGATLFDGGRLRSEVDAQSAVQEQALFN
                     YEQTVLQALEEVENALISHALSRQRVQAWASSAQASASAAQQSRQLYQSGLVDFEQVL
                     ITERSQLNAQESLARAQATQFISLIQLYKALGGGWQETPSVSDELTVVEAAS"
BASE COUNT          984 a         1371 c         1146 g          970 t
ORIGIN      
        1 ataatcatgc cttcgccagt gcgcttgccg ccaagcgtcg taaatttgct ccgactccac
       61 aagctggagc cgctgctggt cagttaaggg cttcacctgt ttgcctgatt tttagttaaa
      121 ttgaatttaa caggcaaaaa tcatattttt caatatgtta tagataaact taaatcaggt
      181 cagctccctg aaaatccccg tatcgaaacc tcggacattt aatgacctcc gcttcttatc
      241 cacggcttag cccgtggtca gtggtctatt catgacgcaa ggcatcgatg gggtttaagc
      301 gagcagcacg ccgcgcaggc gcatacccga acaccacccc gatggcagca gaaaacaaaa
      361 acggcatccc catgagcgac gtgaccccgt aacacgctgc aaacgccaca acaatgccca
      421 ccacaccgcc tagcgcagac aagaccaccg cctcaattag aaactgcagc aagacttcgc
      481 gctcaagcgc accaatggcc atgcgaaccc ctatctcgcg tgtgcgctca gtgaccgaca
      541 ccagcatgat gttcatgatg ccgatgccgc ccacaagcaa gctcacggct gccaccgcac
      601 cgagcaatcc tgtgagcaca cgcacggtcc ccgacagcgt ctcggcaatt tgtcgtgtgt
      661 cggtcacact aaagttatcg gtcacattct cagccaaatt gcgccgttca cgcatgagcg
      721 atttgatgtc accaatgacc ctttgcgtat tggcgatgtc accaactgac atgaggatgg
      781 cgtcgacatt gttcgtgcct gttaagcgcc tttgcgcggt tagcagcggc attaaaaccc
      841 ggtcatcctg atctatcccc aaaccagctt ggcctttgct cgctaaaagc ccgatgatgt
      901 cgcaatcgaa gtttcgaact cggatgcgat caccgatggg attgatggca ccgaacaact
      961 cgcgcctgac ggtttcgccg atgatacaaa ccgaccttcc cgcttgctgt tcatcagtgg
     1021 agaactcgcg accatcggcc agcgtccagt tgcccgtgac aaggtagtca ttggtggtgc
     1081 ccaccacgct agatgaccaa tttttgttgt cggccaccaa cgtgactgcc cgactgacaa
     1141 tgggtgccac cgcttttaac ccaaagattt gttcttgcag tgcctgcgca tcctgcgcgc
     1201 taaaggtatg cgcgccagcc cgttcactgc ccgcgccaag ccgctggcct ggacgcatca
     1261 ccaagaggtt gctgcccaag cttgagatac gctcggagac catcaccgtg gcgccattac
     1321 ctagcgtcac catggtgaca accgccccca ccccaatcac aatgccaagt atcgtcagga
     1381 atgagcgcat caggtgacgc ctgatttcac gcagagccag taagaaagca tttacccaca
     1441 tggctggctt cctgaaggct cggtgcggct ggcaccagcg ggcatttgcg cgttaactga
     1501 gctagcccca ctaacctgac tgacctgact gacgtgacca tccacaaagg taatgatccg
     1561 atcggcataa gccgccatat ccggctcatg ggtcaccatg acgaccgtga tcccacgggt
     1621 ctgatttagc atcgtcaata aatccatgat ctcctggctt cgactgctat cgagattgcc
     1681 cgtgggctca tcggctaaca gcaccagggg ctcggtcacg atgccgcggg cgatggcaac
     1741 ccgctgctgt tgaccaccgg ataactcagc cggggtattt ttctcccaac cagccaatcc
     1801 aacactggca agcgcctgca tggctttctg acgccgcacg gacgccgagt caccccggta
     1861 tagcaaaggc aactcaacat tctctagcgc cgaggtgcgc gacagcagat taaacccttg
     1921 aaatacaaat ccaagcgcat gccggcgtaa cagcgcgcgt tgctggcgtg tcaactgctc
     1981 gacatgaacc ccttgtaaaa cgtactgccc ctgcgttgga ctgtctagac accccagcag
     2041 gttcatcgcg gtcgatttgc ctgacccact aggccccatg atggccacaa actcaccggc
     2101 ctgaatcgtt aggtccaccc ctttgagcgc atcaaaagcc atggcaccct ggccataggt
     2161 tttagtgacg cctcgcaagg taatcaaggg ctgggagggt tcaggcaact gactcactct
     2221 ggcgtctcct gcccaagaat caccgcatca ccgacctgca ggtcacctga cagcacttct
     2281 gtcagacgtc cattgctaat gcccaccgtg accgcgacag cctcgggttg atcacccttt
     2341 aagcgccaca ctctggactg cccgctcggt aggggctcgt cggtgctatc gtcagcacta
     2401 tccgatggcc gataccgcaa cgccgcgtta ggtacgagca atacgttgcc tcgttcggcg
     2461 gttgtgatgg ttgctgtggc cgtcatgcct gggcgtagcg ccaaatcatc attgtctacc
     2521 cgcaaaatgg ttttatacgt cacgacgttg tccgtgatgg ttgaaccgag tcccacccgc
     2581 tcaatgctcg cagggaactg tcggccaggc caggccgaga cagtaaagct aaccgcttga
     2641 cctggactaa ccgtggccac atcggcttca tcgacagaca cccgtaactc catttggcgc
     2701 agatcctcag caatggtgaa caacacgggt gttgacatgg ccgcgaccac ggtattgcca
     2761 ggctcaacct cgcgcgtgag caccacgccg ttgactggtg acttgatttg ggccttttgc
     2821 aagttggtct ggttggtctt gacttcagct tcggcctgca tcacggccgc tttggttgca
     2881 ctgaggttag ccatggcacg cttaagcgtg gcctcggcca cttcaatctc actctcagac
     2941 ggcactttgc caccagagag cttaaagacc tcctgcattc tcgttaacgt cgcacgcgcc
     3001 tcagccacgg tggcgtcaga ttgcaatact tgggcttgcg ccgacgacag tgacgcttta
     3061 gatttggcga tagcatcctc aagtctggag gtatcgagaa cggcaagcag ctcaccaaac
     3121 tcaacaacat cgttttcctg gacgaagacg tcttctagcg tacccgacaa ttctgagccc
     3181 acttcaatgg tgcgcgtggg ttccaaggtg ccggtcgccg tggctgtgac caccaaagac
     3241 ccacgagcca cgggctcagt tacatacgcc acatcggctt gccggcccca accccaccaa
     3301 aagtacaagc ccagagcaat catcacgaca atcacccccc accaaaacag cttacgtctt
     3361 ggtgagccgg tctcgttgcc cctggccagt atggcagcaa gttccggttg ctcgttgccc
     3421 gacggacttt gcgttccggg tttcggttcc gttgggggtg tggttgggcg ttcggtcgat
     3481 ttgttcatga ggcagcttcc accacggtca gctcgtcaga cacagacggc gtttcttgcc
     3541 acccgccacc gagcgccttg tagagttgaa taagggaaat aaattgggtt gcttgcgctc
     3601 gcgccaagct ctcttgggcg ttgagctgcg agcgctcggt aataagcacc tgctcaaaat
     3661 ccaccaaacc tgactgatat agctgccttg actgctgtgc cgcactagcc gacgcctggg
     3721 cagaagatgc ccatgcttga actcgctgac gagacaatgc gtgtgagatc aatgcgttct
     3781 ccacttcctc aagggcttgc aacacggttt gctcatagtt aaacaacgct tgttcttgca
     3841 ccgcgctttg cgcatcgacc tcgcttcgca acctgccacc atcaaataga gtggcgccaa
     3901 gcgtgcccgc caaaacacca atcaacgagt cggccggacc gatgccacta agcgtaaacg
     3961 ccgtccatcc gatagagccg ccgagattca gactgggata gcgccgtgct gtgacctgcc
     4021 caacccgtgc ggtctctgca gccagattac gttcagcctc gcgcaggtcc ggtcgctgag
     4081 tcagcacatt ggttgggata cccgtggcaa tggtgtttgg caaagatggc aatgacttgt
     4141 cggttgaccg cacgctagat aggcgtttgt tgactgcacc cggtgcctgc cccgtcaaaa
     4201 cagacaaccg attgttggcg cgtgccaact cgatttccag atcaggcagg ctggcgcggg
     4261 tttgctccag actggctcgc gcttgcgcca catcggtttg tctggcgaga ccggcctggt
     4321 gtcgccactg agcgatttga agggtttcgg cttgtgatgc cagattgcgt ttggcaattg
     4381 ataaacgcac ctgactattg cgtaaatcga catagttttg tgcgacctcc gcggctactg
     4441 agacgcggat gttgtccaag gccgcctcac t
//
LOCUS       DATBNL010000530         1978 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_56154, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000530 DATBNL010000000
VERSION     DATBNL010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56154"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..135)
                     /locus_tag="VIC30_09180"
                     /pseudo
     CDS             complement(1..135)
                     /locus_tag="VIC30_09180"
                     /inference="COORDINATES: protein motif:HMM:NF025397.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DSD1 family PLP-dependent enzyme"
     gene            complement(157..1053)
                     /locus_tag="VIC30_09185"
     CDS             complement(157..1053)
                     /locus_tag="VIC30_09185"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY7804588.1"
                     /translation="MLPYKACQVGDPVANIETPALVLDLDAFERNLDLLMLQAGQMRV
                     RPHAKSHKCPEIAHRQMAKGAVGICCQKLSEAVVFAQAGLTDILITNQVVGASKLTRL
                     AALSQQCQLGVLVDDLAQVHALGLAMAGLPKLLDVYVEVEVGGQRCGAPPESVPELVD
                     AIAADSGLRFAGLHCYHGAAQHYREDSARQQAINKTTQTVEQVVAALKTRGIGVPCVT
                     GAGTGTFWLERDSGCFTEIQPGSYALMDRDYADNAVGPDDVRFEHALFIKSSVTSVSH
                     ASFAVLDAGLKSLSVDSGMPGI"
     gene            1221..1937
                     /locus_tag="VIC30_09190"
     CDS             1221..1937
                     /locus_tag="VIC30_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEY7804589.1"
                     /translation="MNQPDEVRALLFDVFGSVVDWRTSITRDLQAWGKDRQIDADWEA
                     FARAWRGFYQPKMQEVRSGKRPFALLDDLHRESLEVLLPQFGISGLSKSDKDHINRVW
                     HRLDAWPDSIAGLWQLKSRFTIAPLSNGNVALLNNMAKHAGLPWDLNLSTQWFEAYKP
                     QPQTYLGAVEVLGLKPEEVMMCAAHNDDLQAARQCGLKTAFWPRPTEYGVDQTKDLAP
                     DQDWDVVATDIRDLARQLLG"
BASE COUNT          511 a          560 c          488 g          419 t
ORIGIN      
        1 tgatacgaca atcaagtcat cgtacagatt aacggttggg tcacaatgac ctggaatcaa
       61 ccacacggtc tgccctagca tcagggattg cgccgagccc agtgtcacca caccatgctc
      121 atcggatgct ttctgatagc caagcccctg cccatgctag atacccggca tgccgctatc
      181 gacacttaag gacttcagac ccgcatcgag aaccgcaaaa ctcgcatgcg acacgctcgt
      241 gaccgagctc ttgataaaca gagcatgctc aaatctcaca tcgtctggtc caactgcgtt
      301 atcggcataa tcccgatcca ttagcgcata ggaacccggt tggatttcgg taaaacaccc
      361 cgagtccctc tccaaccaaa acgtacccgt cccagcccca gtcacacacg gcacaccaat
      421 ccctcgtgtt ttaagtgctg ccacgacctg ctctaccgtc tgggttgtct tattgatcgc
      481 ctgttggcgc gcgctatctt cgcggtagtg ttgagcagca ccgtgatagc aatgtaggcc
      541 agcgaaacgc aaacctgaat cagctgcgat agcatccact agttcgggta ccgactcggg
      601 tggagcaccg caacgttgac caccgacctc gacctcgaca taaacatcca gcagcttggg
      661 taatcctgcc atcgcaagac caagggcgtg aacttgtgcc aaatcatcga cgagcacgcc
      721 taattgacac tgctgcgaca aagcagctag gcgagtcaac ttggacgcac ccacaacttg
      781 gttggtgata aggatatcgg tcagcccagc ctgggcaaac accaccgcct cactgagttt
      841 ttggcagcag atgcccacgg cgcctttggc catctgccga tgggcaatct cggggcattt
      901 atggctcttg gcgtgcggcc gtactcgcat ttgaccggcc tgcagcatca gcaaatcgag
      961 gttacgctca aatgcatcta gatctagcac caaggcaggc gtttcgatat tggcaaccgg
     1021 atcgccaact tgacaggctt tatacggcaa catgacatct ttccttttag cgatcagcca
     1081 ctcaatgact tacccaatga gtcactcaat gataggcttt atgacaacat gaaagaaagc
     1141 gacaatcaat caagcaaata aagaacgcga tcaaagaacg agattcaaaa tatcatccca
     1201 ttcagaataa aggaaacagc atgaatcagc ctgacgaggt gcgtgcattg ttatttgatg
     1261 tgttcggctc agttgtagac tggcgcacaa gcatcacacg tgatcttcaa gcctggggca
     1321 aggacagaca gatagacgca gactgggaag cgtttgcgcg tgcctggcgc ggtttttatc
     1381 agcctaagat gcaagaagta cgtagcggca aacgtccgtt tgccctgctc gacgacttgc
     1441 atcgcgagtc gctcgaagtg ttgttaccgc aattcggtat cagcgggtta agcaagtctg
     1501 acaaggatca catcaatcgg gtctggcacc ggctcgacgc ttggccagac agtattgccg
     1561 gactatggca attgaaatca cgctttacca ttgcaccact gtccaacggc aacgtggccc
     1621 tgttaaacaa catggccaaa catgccggtc taccctggga tttaaacctg tcgacccagt
     1681 ggttcgaagc ctacaaaccg cagccacaga cttatctagg tgccgttgag gtgctcggcc
     1741 ttaaaccaga agaagtcatg atgtgtgcgg cgcacaacga cgatctgcag gccgcccgcc
     1801 aatgcggatt aaagaccgcg ttttggccga ggccaaccga atatggcgtg gatcaaacga
     1861 aggatttggc gcccgaccaa gactgggatg tggtcgcaac cgatatccgc gatttggcaa
     1921 gacagcttct gggctaaggc acgcgcctaa atccagtcag ccttgatcct gacgttta
//
LOCUS       DATBNL010000531         2134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_66314, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000531 DATBNL010000000
VERSION     DATBNL010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66314"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2134
                     /gene="mutS"
                     /locus_tag="VIC30_09195"
     CDS             <1..>2134
                     /gene="mutS"
                     /locus_tag="VIC30_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEY7804590.1"
                     /translation="AKLLNLTLTKRGTSNGAPIPMAGVPVHAVDQYLGKLVAAGESVA
                     VCEQIGDPATSKGPVERQIVRIITPGTLTDEALLPSKSERCLAALWQPMRAGKPVGSA
                     GLAWLNLASGEFRITECSPELVATTLERIAPAELITAEDQLAPELRHCSMTSIPTWHF
                     ERRDAEQQLLSHFGVGSLAGFDVTDLDAAICAAGALVRYAIRTQSQSLPHVQTLSAER
                     AGEYVLMDPATRRNLEISETINGQSSPTLFSLLDHAGTPMGSRLLRRWLHQPLRDNAP
                     VLERQQAIADLLGTDNTSQGLSNLRQQLSRWPDLERMAARLALRSVKPRELASLRDAL
                     TALPEVRDTLNQLGCTPSSRLVKLEVSLNVDPAVADLLERAVASEPAVQIRDGGVMAS
                     GYDEELDELRRLSSDQGNVLIDIEARERERTGITNLRVEYNRVHGFFIEVSRGQIDKV
                     PDDYRRRQTLKNAERFITPELKEWEDKILSAQERSLAREKWLFEDLLDQLTPSVPALI
                     AAAAALAEIDALASLAHHAELNGWVAPELLDHPALEIEGGRHPTVEHTIERFTPNDCV
                     LSAKRSMLIVTGPNMGGKSTYMRQVALIGLLARIGSHVPATRARIGTIDRIFTRIGAA
                     DDLAGGRSTFMMGMTEAATILSASTPNSLVIMDEIGRGTSTYDGLALAWAIANRLLTH
                     NRALTLFATHYFEMTRLPNDNPCAANVHL"
BASE COUNT          475 a          625 c          583 g          451 t
ORIGIN      
        1 gccaagctac tgaatctcac gctgaccaag cgtggcacgt caaatggcgc accaatccca
       61 atggctggtg tacccgtgca tgccgtggat cagtacttgg gcaagctcgt ggccgctggt
      121 gagtcggtgg ctgtgtgtga acaaatcggt gatccagcca ccagcaaagg tccagttgag
      181 cgccagattg tgcgcatcat cacgcccggc accctgactg acgaggcgct tttaccaagc
      241 aagtcggagc gatgtttagc agccctatgg caacccatgc gtgcgggtaa gcccgttggc
      301 tcagcgggtt tggcttggct gaatctggcc agcggtgaat tcaggatcac agaatgtagc
      361 ccggagctcg tggcaacgac gctcgagcgc atcgcaccag ctgagttgat cacagccgag
      421 gatcagttag caccggaatt gcgtcactgc agcatgacgt ctattcccac ctggcacttt
      481 gagcgcagag atgccgagca gcaactatta agtcattttg gggtgggctc actggccgga
      541 tttgatgtca ctgatcttga cgcggccatt tgtgcagctg gggccttggt gcgttatgcc
      601 atccgaacgc aatcacagtc actgccacat gttcagacct taagcgctga gcgtgccggc
      661 gagtacgtgc tgatggatcc ggccacgcgc cgaaatctag aaatcagtga gaccatcaat
      721 ggtcagtcct ctcccacgct attttcttta ctagatcacg ccggcacccc catgggtagc
      781 cgattactca gacgatggtt acatcaaccg ctgcgtgata acgcgccagt actcgagcga
      841 caacaagcca ttgccgatct gctgggcacc gacaatactt cgcaaggctt atcgaacctg
      901 cgccagcaac tgtcacgttg gcccgatctc gagcgcatgg ctgctcgctt ggcgctgcgc
      961 tcagtcaagc cgcgcgagct tgccagtctg cgcgatgcgc tgactgcctt acccgaggta
     1021 cgtgacaccc taaaccaact gggatgcaca ccgagttcac gtttagtcaa gctagaggtc
     1081 agtctaaacg ttgacccggc tgttgctgat ttgctcgaac gcgctgtggc cagcgagcct
     1141 gctgtacaaa ttcgtgatgg tggcgtgatg gcctctggct acgatgaaga actcgatgaa
     1201 ctaaggcgcc tatcatcgga tcagggcaat gtgctaattg acattgaggc acgtgaacgc
     1261 gaacgcaccg gcattaccaa cctacgtgtt gagtacaacc gcgtgcacgg gttctttatt
     1321 gaggtctcta gaggccagat cgacaaagtg cccgatgact accggcgtcg ccagacccta
     1381 aaaaatgccg aacgattcat cacgccagag ttaaaagagt gggaagacaa aatcctttct
     1441 gcccaagagc gttctcttgc tcgagaaaag tggttatttg aagacttact agaccaactc
     1501 acaccaagcg tgcccgcgct aattgccgcg gccgcggcct tggctgagat cgatgctttg
     1561 gcctcacttg cccatcacgc cgaactaaac ggctgggtgg cgcctgaatt gctcgaccac
     1621 cctgccttag aaattgaagg tgggcgccac cccaccgttg agcacaccat tgagcgcttc
     1681 acccccaatg actgcgtttt aagcgcaaag cggtcgatgc tcattgtcac gggccccaac
     1741 atgggcggta aatccaccta catgcggcaa gttgccctaa ttggactatt ggcccgtatc
     1801 ggcagccacg tacccgccac gcgggcgcgc attggcacca ttgaccgtat ctttacacgc
     1861 attggcgcag ctgacgactt ggccggtggg cgctcgacat tcatgatggg gatgaccgaa
     1921 gcggccacga ttttatcggc gagcacaccc aacagcctgg tcattatgga tgagatcggc
     1981 cgtggcacct cgacctacga cggcttggca ctggcctggg ccatagccaa tcgcctgcta
     2041 acccacaacc gagctctgac attgtttgcc acgcactact ttgagatgac acgcttgccc
     2101 aacgacaatc cgtgtgcggc caacgttcat ctgg
//
LOCUS       DATBNL010000532         1761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_106194, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000532 DATBNL010000000
VERSION     DATBNL010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106194"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VIC30_09200"
     CDS             complement(<1..200)
                     /locus_tag="VIC30_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEY7804591.1"
                     /translation="MLEALAKIVGQEHVLTGEAAEPYLVDWRGRYRGKAQAVVRPGST
                     DEVAAVIRHCVEQGVPGVTIGG"
     gene            323..1708
                     /locus_tag="VIC30_09205"
     CDS             323..1708
                     /locus_tag="VIC30_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEY7804592.1"
                     /translation="MSTPELPAHVFKAYDIRGEVPDDLNPDFAMLLGRSLAARAKAAG
                     VDKVVIGYDGRLSSPDLAESLSAGIREGGVGAIELGMVPTPLVYFAAHYLGTGTGVAI
                     TGSHNPPQYNGFKMMLAGSTLYGESITDLRQEMHKPKAVASTPGDIEPVDIKPIYLER
                     VTSDVKLARPMKIAIDCGNGGAGVIATELYKALGCEVVELFCDVDGRFPNHHPDPAEP
                     HNLQDLIKAVQTHDCEVGLAFDGDGDRLGVVTRSGEIIWPDRQMILFARDILDRLPAS
                     EILFDVKCSRQLPLAITAAGGHPLMCRTGHSLVKAKLAETGAPLAGEMSGHIFFKERW
                     FGFDDGLYTGARLLEILSKTEDPSATLEALPTAFSTPELKLEMNEGEPFTLIDALKHN
                     AKFEGAESVSTIDGVRVDYADGFGLARPSNTTPVVVLRFEGETPAALDRIKGQFRDQL
                     KALAPNARLPF"
BASE COUNT          413 a          520 c          450 g          378 t
ORIGIN      
        1 ttgccaccaa tggtcacccc gggcacaccc tgctccacgc agtgacgaat aacggccgcg
       61 acttcgtcgg tgctcccggg tcgaaccacg gcttgtgcct taccacggta gcgcccgcgc
      121 caatccacga gatatggctc agcggcctcc cccgtcaaaa catgttcctg accgactatt
      181 tttgctaacg cttcaagcat gattttcact caacctaaat ggcacttgcc cacactaaaa
      241 cagcgataaa accagcgccg agcggacaag acaatatatt tgcgataata gccacaaaat
      301 ctcttagcct gatggattaa ccatgtcaac gcctgaactg ccagcacacg tttttaaagc
      361 ctacgacatc cgcggtgagg ttcccgatga cctgaaccca gatttcgcca tgctgcttgg
      421 ccgaagctta gcggcacgcg ccaaggccgc cggcgtcgac aaggtcgtga ttggctatga
      481 cggcaggcta agcagccccg atctggccga gtcgctaagt gccggtatcc gtgaaggtgg
      541 tgttggtgcc atcgagcttg gcatggtacc caccccactg gtttattttg ctgcgcatta
      601 ccttggcacc ggcacaggag tggccattac cggcagccac aatccacctc agtacaacgg
      661 cttcaaaatg atgctcgctg gcagcacgct ctacggcgag agcatcacgg acttacgtca
      721 agaaatgcac aaacccaaag cggtcgcctc aacaccgggt gatattgaac ccgtggacat
      781 caaaccgatt tatttagagc gggttaccag tgacgtcaaa ctggcccgcc ccatgaaaat
      841 cgccatcgat tgcggcaacg gcggggctgg cgtaatcgcc accgaactat ataaagcgct
      901 cggctgtgaa gtcgtggaac tgttttgtga cgtcgacggt cggttcccta atcaccaccc
      961 agatcctgcc gagccgcaca acctgcaaga cttgattaaa gccgtccaaa cccacgattg
     1021 cgaagtgggc ctggcttttg atggcgacgg tgaccgactt ggcgtggtca cccgcagcgg
     1081 tgaaattatt tggcccgaca gacagatgat tctgtttgca cgcgacatcc ttgatcgact
     1141 gcctgctagc gaaatcctgt ttgatgtgaa atgcagccgt cagttgcccc tggccataac
     1201 ggctgcaggc ggacatccct tgatgtgtcg cacagggcac tctctggtca aagccaagct
     1261 cgccgagacc ggcgcgccat tggcgggcga gatgagtggt catatctttt ttaaagaacg
     1321 ctggtttggt tttgatgatg gtctatacac cggggcgcgc ttactggaaa tcctctctaa
     1381 aaccgaggat ccgagtgcaa cacttgaagc actacccacg gccttcagca ctccagagct
     1441 gaaacttgag atgaatgaag gtgagccttt cacgttaatt gatgcgctaa aacacaacgc
     1501 caaattcgaa ggcgcagagt cggtctccac cattgatggc gtgcgggtcg actatgccga
     1561 tggctttggc ctggccagac cttcgaacac aacaccagtc gtggtgttgc gctttgaggg
     1621 agagacgcct gccgcgcttg atcgcatcaa gggccagttc cgtgatcagc tcaaagcact
     1681 ggcaccaaat gctcgtttgc ctttctagca cgcctgcctt tttaacttat ctccacccca
     1741 tgaccgacac gcccaataac c
//
LOCUS       DATBNL010000533         2363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_76283, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000533 DATBNL010000000
VERSION     DATBNL010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76283"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1233)
                     /locus_tag="VIC30_09210"
     CDS             complement(43..1233)
                     /locus_tag="VIC30_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY7804593.1"
                     /translation="MSTPIRPLDGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGV
                     GDFARGYDERVRGMASHFVWTNRSKESLTLDLKKSGARGVLQDLLKQADVLVQNLAPG
                     ASARMGLGFETLHEVNDQLIVCDISGYGETGPYETKKAYDLLIQSESGFLSVTGSPDA
                     PAKAGCSIADISAGMYAYSGILNALLLRARTGKGSRIDVSMLESMAEWMSFPLYYAFE
                     GAEPPPRAGAAHATIFPYGPFAVGDGNTVMLGLQNEREWVVFCEQVLQRPALATDPDF
                     NANSRRVANRERLRTFIVDAFAQMNIDEVIERLEQAQIANARVNDMKGLWAHPQLAAR
                     GRWKEVESPVGGLPALIPPATSSAFDACMDAIPALGEHTDAILREIGIEQSEIDRMRA
                     SGEV"
     gene            complement(1230..2060)
                     /locus_tag="VIC30_09215"
     CDS             complement(1230..2060)
                     /locus_tag="VIC30_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7804594.1"
                     /translation="MTEVDLNAWIGRSQRIDDAMDVGHAARIAATLGGPAPKVGEPLP
                     VLWHWCYFLESAPMGELGADGHPARGGFLPPADNRNRMWAGSRVSIDGPLLAGVPAYK
                     TTTIKSIVEKQGRTGSLLFVTLVHEVMQKGARVIYDEQDVVYRAPSPPKLEGTEPAPT
                     AAWRETVEPTSVWLYRYSAVTFNGHRIHYDFPYVTEQEGYPGLVVHGPLTFTCMVQAF
                     CRANPHARIKHLTHRGLRPLISPKPFDVAGTMVEDGLAHIWAEQDGTLAQQGEIRFEA
                     "
     gene            complement(2096..>2363)
                     /locus_tag="VIC30_09220"
     CDS             complement(2096..>2363)
                     /locus_tag="VIC30_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7804595.1"
                     /translation="AAALSESDAAVRGKRVSMVKTEVANAARQVGEEAVQLHGGMGVT
                     DELEVGDYFKRLVYIGNLLGDNNFHYARAQSLEALVATETPEAA"
BASE COUNT          535 a          725 c          600 g          503 t
ORIGIN      
        1 tgcacaccgg tcgattagct cgacaagctt cgctagccgc ccttaaacct caccgctagc
       61 tcgcatccgg tcaatctctg actgctcaat gccaatctca cgcaaaatcg catctgtatg
      121 ttcacccagc gccggaatcg catccataca agcatcgaaa gcactgctag tggcaggcgg
      181 tatgagcgca ggcaacccac ctaccgggct ttcgacttcc ttccaacgcc cacgagcagc
      241 taactgcgga tgtgcccaca ggcctttcat gtcattgaca cgcgcattgg caatctgtgc
      301 ttgctctaat cgttcgatga cctcgtcaat gttcatctgc gcaaatgcgt cgacaatgaa
      361 cgtgcgcaag cgctcgcgat tggcaacgcg acgcgagtta gcattaaagt caggatccgt
      421 ggccaacgcg ggtcgctgca aaacctgctc acaaaacacc acccattcgc gctcgttttg
      481 taggccaagc atgaccgtgt tgccatcgcc cacggcgaac ggaccgtaag ggaagatggt
      541 cgcatgtgct gccccggcac gcggcggcgg ctcagcccct tcgaaggcgt aatacagcgg
      601 aaagctcatc cattcggcca tgctctcaag catagagaca tcgatgcgac tgcctttgcc
      661 agttcttgcg cgcaagagca acgcattgag aatgcccgaa taggcataca taccagcgga
      721 aatgtcagca atcgagcaac ctgccttggc cggtgcatca ggtgaacccg taaccgacaa
      781 aaacccgctc tcactttgaa ttagcaggtc gtaggccttc ttagtctcat aaggtccagt
      841 ttcaccatag cctgaaatat cacagacgat taactgatcg ttgacctcgt gcagtgtctc
      901 aaaccccaat cccatgcgcg cagacgcacc cggcgccagg ttttgtacta gaacatcggc
      961 ttgctttaac aagtcttgca gcacgccgcg cgcacccgac ttttttaagt ccagcgtcag
     1021 actttccttg gatcggttgg tccagacgaa gtgcgaggcc atgccacgca cacgctcatc
     1081 gtaaccacgt gcgaagtcac ccacaccagg gcgctcgact ttgattaccc gtgcacccat
     1141 gtcggccaac tgacgagtac aaaaaggggc ggcaatcgcg tgctctaagc tgacaacggt
     1201 tatgccgtca agtgggcgta tgggtgtact catgcttcga acctaatttc accttgctgc
     1261 gcaagcgtgc catcttgctc ggcccaaatg tgcgcgagcc cgtcttcaac catggtgcct
     1321 gccacatcga acggcttggg actaatcagg gggcgtaaac cccggtgggt caggtgtttg
     1381 atgcgtgcat gcggatttgc ccgacaaaac gcctgcacca tgcaggtgaa ggtaaggggg
     1441 ccatgcacaa ccaaaccagg atagccttct tgctcagtca catacgggaa atcatagtga
     1501 atacgatgcc cattaaacgt caccgctgaa tatcggtaga gccagaccga tgtcggctca
     1561 accgtctcgc gccaagctgc ggtcggagcc ggctctgtgc cttctagctt cgggggcgat
     1621 ggcgctcgat acaccacatc ttgctcgtca tagatcacgc gtgcgccctt ttgcatcacc
     1681 tcatgcacca aggtcacaaa cagcagcgat cccgtgcgac cctgcttctc gacgatgctt
     1741 ttgatggtgg tggttttata ggcaggcaca cccgccagta acggaccgtc gattgacacg
     1801 cggctaccgg cccacatgcg attgcggtta tcagccggcg gcaaaaaacc accacgcgct
     1861 ggatgaccat cagcgccgag ctcacccatc ggtgcacttt ccagaaagta gcaccaatgc
     1921 cacagcactg gtaatggctc gcccactttg ggggccgggc cgccgagcgt ggcagcaatg
     1981 cgcgcggcat gccctacatc catggcgtca tcaatacgtt gtgagcgccc aatccaggcg
     2041 tttaagtcga cttcggtcat gcgcgtgttg tccttaatgg gtttagatac atcatttagg
     2101 ctgcttcagg cgtttcagtc gctacaagtg cttcaagcga ctgagcgcgg gcataatgga
     2161 agttgttgtc tccaagcaaa ttaccgatgt acaccaaacg cttgaagtag tcacccacct
     2221 cgagctcgtc tgtcacaccc ataccaccat gtagttgcac ggcttcttct cccacttgtc
     2281 gcgctgcgtt ggccacctca gtttttacca tcgagacgcg tttacctcgc acggccgcat
     2341 cggattcgga caacgcagcg gcc
//
LOCUS       DATBNL010000534         8053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_156075, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000534 DATBNL010000000
VERSION     DATBNL010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 8053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8053
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156075"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1429)
                     /locus_tag="VIC30_09225"
     CDS             complement(38..1429)
                     /locus_tag="VIC30_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018005870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY7804596.1"
                     /translation="MNTVVKALEENLEPGQLLVGDAIDDRYKTDWSKAQVAQPLAVVR
                     ARTTEAVSQALRVCHAHDQPVTVQGGMTGLVGASQVNEGDVVISLEFLNGIQEIDAPA
                     SCMTLWAGTPLQIAQEKALDQGLYLAVDLGARGSCQVGGNIATNAGGNRVIRYGMMRE
                     QVLGLEVVLADGTIVSSMNKMLKNNAGYDIKQLFIGSEGTLGVVTRAVLRLHPVPSQT
                     ATVLCALASESAMLQFLMRARQTMGASLLAFEVMWPDFFAFMTQQVDGNVSPFGQSPK
                     MAVLIEVATGQSGLSMETVETLLEQALEDDELTDAVIAQSGQQAAAFWRIRDSVSEFP
                     ILIAPYASFDVSLPIESVVRFVSTLKAQVQQQWPDAVSMFFGHIGDSNLHIVVHVPTT
                     REQFPKEAIDTMVYEQVGQYQGSVSAEHGIGTRKKKWLGQSRNPAEMALMRTIKLALD
                     PKQILNRGRVIDV"
     gene            complement(1426..2397)
                     /locus_tag="VIC30_09230"
     CDS             complement(1426..2397)
                     /locus_tag="VIC30_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804597.1"
                     /translation="MLLTNPIHAQAQARLAKMADICLAPDTRDCTLKQLVQDCDAMMV
                     RCHLPTDIFEAAPRMRYVVRHGVGLDMVPVSEATARGIVVANLPGSNTTAVVEYVLAA
                     MMALRRNVVQMDHVLRTQGWEHAKPLSNTCIEWHGTTLGIIGYGAIGQRLAKVASAMG
                     MNVCAYTRRPETVTEPVQASDLAGLLATSDLIVLACPHNEQTHHLMNAERLALLKPSA
                     LLINVARGPVVDTDALVQALKLGQLAGAALDVHEHVPLSGQEAIFECPNVLLTPHLAG
                     NTETSLSKMSQWAVDTLEALLAGQRPDNVVNPAAFEHRDCARKGYSG"
     gene            complement(2535..3395)
                     /locus_tag="VIC30_09235"
     CDS             complement(2535..3395)
                     /locus_tag="VIC30_09235"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017452412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY7804598.1"
                     /translation="MNYQTLISVQELQISMRDAASNLVVLDASHDLFDPTLGQRQYEA
                     CHLPGARFVSLDRDVGGQKTGTNGRHPLPTREQVVAVMRRLGVNDDSQVVVYDQCEGM
                     HASRVWWTLNWLGHRDVAVLDGGLAAWQRHEGPVQSELPAPATEGNFSDRGPGMPVVT
                     YEDVLNNIGTDERLVVDARAEDRFAGQNETLDPIGGHIPGAINHFYKNNLNPDGTFKT
                     VDQLTAQFQAMIGQRRAEYLIMQCGSGVSACHNLLALQLVGLGTAPLYVGSWSEWCSR
                     DGAPIATGDD"
     gene            3694..4701
                     /locus_tag="VIC30_09240"
     CDS             3694..4701
                     /locus_tag="VIC30_09240"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY7804599.1"
                     /translation="MSSSPFNSYNVLWKIGGQVFADSATDHRYRTQDLVQASHPLPGD
                     VGSGTFTSLKLTSGLSVHHSAFEFNAARSSQPLSAVVHMDLKEPCLLMHFVLVGGLTR
                     HDYIKGSRHRLAPGTALLQWTERTHSELAFDQLPAVEVLYVHASRSSLNLLLGPELTE
                     HLQYSVQTSNSLMALPTKVSAPLRFCFDETLTGPVRKLHAQNKLLEFLEQLIRYFDEI
                     GMQRPVNQRFSAYALMHYLKQRPGQLPPAGELAQRFGVSVGTMNEAFIAAFGMSVASF
                     MKEQRMTYAHEFLSNTRLSVAEIAAQLGYSHVSNFSAAFRAFFGYSPTELRRSALSDE
                     R"
     gene            complement(4768..5667)
                     /locus_tag="VIC30_09245"
     CDS             complement(4768..5667)
                     /locus_tag="VIC30_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HEY7804600.1"
                     /translation="MKVDFTKPARTWLAQLELLESRGLRVPDLERAQHYLAHINYYRL
                     TGYWLPFEEDHATHRFTEQASFDDVLNLYIFDRELRLLVLDATERIEVSLRAQWAYHM
                     AHRHGPHSYLDAKHASDPKLHALHLTKLKKEIARSDEVFIHHYRNTYQHPPSPPIWAI
                     SEIMSLGTLSRWVTHMVPSDRAVLARTYGLDQGVLKGFLQHLTHIRNLCAHHCRLWNR
                     RFTVTMPVPRRKPVALLSSFSSNEPRRIYNTLVMLAALMDIVSPGHQWKVRLREMMVT
                     HGVDHRSMGFPDDWGKRPIWSCL"
     gene            complement(5990..6065)
                     /locus_tag="VIC30_09250"
     tRNA            complement(5990..6065)
                     /locus_tag="VIC30_09250"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6030..6032),aa:Thr,seq:tgt)
     gene            complement(6151..6579)
                     /locus_tag="VIC30_09255"
     CDS             complement(6151..6579)
                     /locus_tag="VIC30_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEY7804601.1"
                     /translation="MAETSTKPYMLRALHEWATDNGYTPHIVVQVNEMCRVPPAFVRD
                     GQITLNVSEVATGGLLIGNDFIEFQARFGGKPEQIFVPVGAVTAIYARETGTGMGFEV
                     EQTASDALESHRSTAAAQEPSEQKQSSEDKPKRPSLKIVK"
     gene            complement(6609..7220)
                     /locus_tag="VIC30_09260"
     CDS             complement(6609..7220)
                     /locus_tag="VIC30_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006999756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7804602.1"
                     /translation="MMVLYSGTTCPFSHRCRFALYEKDMDFEVQDIDLYNKPEDISVM
                     NPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADPVMRARTRLFLFNFEKELF
                     VHVALLEDRTARGETAKLDAARAAIRDRLSQLAPLLLKNKYMLGEEFTMLDVAMAPLL
                     WRLDHYGIELPKTAAPIQKYGERIFSRPAYIEALTPSEKVMRR"
     gene            complement(7308..>8053)
                     /locus_tag="VIC30_09265"
     CDS             complement(7308..>8053)
                     /locus_tag="VIC30_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEY7804603.1"
                     /translation="NDQAALQNGAKIFVNQCLNCHGARSLRYNKLRDIGLTDQQIKES
                     LLFTGEKVGDLMTIAMTKEDGTTWFGAAPPDLSVIARSRSKNAGPPGGDYIYTYMRTF
                     YRDTTQPTGWNNLAFPNAGMPHVMWDAQGPRELTSTLIHQVPKDGEMVWEKITKQYGT
                     EGYWTAEAEILDNYSGSAGETHTFKPLDPSRAAQYDRDMGDLAAFMTWMAEPSQLKRK
                     QIGFWVLVFLGLFFVVAWRLNATYWKHIK"
BASE COUNT         1933 a         2208 c         2038 g         1874 t
ORIGIN      
        1 caaaactgac acttaacaga catcagtcaa acatcaatca aacatcaatg acgcgccctc
       61 gattcaatat ctgctttgga tcgagggcga gtttaatagt ccgcatcaac gccatctcag
      121 ctggattgcg agactgacca agccactttt tcttgcgcgt gccaatgcca tgctcggctg
      181 acaccgaacc ttggtattgc cccacctgct catagaccat cgtatcaatc gcctctttgg
      241 gaaactgctc acgcgtggtt ggcacgtgca ccacgatgtg caggttgcta tcgccaatgt
      301 gcccaaaaaa catagaaacg gcatctggcc attgctgttg cacttgcgct ttcaacgtac
      361 tgacaaaccg cactaccgac tcaatgggca agctcacatc aaaactcgca tagggtgcaa
      421 ttagtattgg aaattctgag accgaatccc ggattcgcca gaatgcagct gcttgctgac
      481 cagattgcgc aatcaccgca tccgttagtt catcgtcctc taacgcttgc tcaagtagcg
      541 tctctacagt ctccatcgac aaaccacttt gaccggtggc cacctcgatc aacaccgcca
      601 tcttgggcga ctgcccaaaa ggcgagacat taccgtcaac ttgctgggtc ataaatgcaa
      661 aaaaatcagg ccacattact tcgaaggcca acagcgacgc ccccatggtt tgtctagccc
      721 gcatcaggaa ctgcaacatg gctgactcgc tagccaatgc acatagcact gtggcggttt
      781 gtgacggcac aggatgcaag cgaagcactg cacgtgtcac gacccctaac gtgccttccg
      841 aaccgataaa aagctgcttg atgtcatagc cggcgttgtt cttaagcatc ttattcatac
      901 tgctcacgat ggtgccatct gccaacacca cttccaaccc aagcacttgc tcgcgcatca
      961 ttccatagcg aatgacacgg ttgccaccgg cattggtagc gatattgcca ccgacctggc
     1021 atgagccacg cgctccaaga tcaacggcga ggtagagccc ttgatccaag gctttctctt
     1081 gcgcgatttg caaaggcgta ccggcccaaa gcgtcatgca gctagcgggt gcatcaattt
     1141 cctgaatccc gttcagaaac tcaagcgaga tcaccacgtc accttcattg acctggctag
     1201 cacccaccaa gcctgtcatg ccaccttgca cggtgacagg ttggtcatgc gcgtgacaga
     1261 cccgcagtgc ctgtgaaacg gcttcagtgg tgcgtgcgcg caccacggca agcggttggg
     1321 ccacctgtgc ctttgaccag tcggttttat agcgatcgtc aatggcatca cccaccagaa
     1381 gttggccagg ctccaagttc tcttcaagcg ctttgacgac ggtgttcatc ctgagtaacc
     1441 ctttctagcg caatctctat gctcaaacgc cgccgggttg accacattgt ctggtctttg
     1501 accggcgagt aaggcttcaa gcgtatcaac ggcccactga ctcatctttg acagactggt
     1561 ctcggtattg ccagccaaat ggggcgtcag aagcacattg gggcattcaa atatagcctc
     1621 ttgaccactc aaaggtacat gctcatgcac atcaagtgcg gcaccggcca attggcctag
     1681 ctttagcgcc tgtaccagtg catcggtgtc tacgacagga cctcgagcca cgttgatgag
     1741 caacgcgctc ggtttgagca atgccaagcg ctctgcgttc atgaggtgat gggtttgttc
     1801 gttgtgcgga cacgccaaca caatcaaatc gctagttgcc aacaaccctg ccaagtcgct
     1861 cgcctgaacc ggctcggtca cggtctcagg gcgacgcgtg tatgcacaaa cgttcatacc
     1921 catggcactg gcaaccttag ccaatcgttg cccgatcgcc ccatagccga tgatcccgag
     1981 cgtggtgcca tgccattcga tgcaagtgtt ggataagggt ttggcgtgct cccatccctg
     2041 agtacgcaag acatgatcca tttgcaccac gtttcgccgt agtgccatca tcgccgctaa
     2101 aacgtactca accacggctg tggtgttact gcccggcagg ttggcaacca caataccgcg
     2161 ggctgtcgct tcggataccg gcaccatgtc caagccaacg ccatggcgca cgacgtatct
     2221 catgcgtggt gctgcctcga atatatcggt tggcaaatga cagcgcacca tcatggcatc
     2281 acaatcttgc actagttgct tcagcgtaca gtcacgcgta tcaggtgcca gacaaatgtc
     2341 agccatcttt gccaggcgag cctgcgcctg cgcatgtatg gggttggtca gtagcacgcg
     2401 cggtctgatc atttgggtct agttgttagg gtaggcttac agtcaaacga accaaagttt
     2461 gcgttgactg taagccatcg gcgcaccgga tggtagaccg aacggtgccg aacggtgcgc
     2521 cgcaccgata gaacttagtc gtcacccgtg gcgatcggtg cgccatcacg cgaacaccat
     2581 tcgctccacg atcccacata aaggggcgct gtgcctaggc caaccaactg cagcgccaac
     2641 aagttgtgac aagccgaaac accggagcca cactgcatga tgaggtactc agcccgtcgc
     2701 tggccaatca tcgcttggaa ctgcgcagtg agttggtcaa cggttttaaa tgttccgtcc
     2761 gggtttaggt tgttcttgta gaaatggtta atggcgccgg gaatgtgtcc gccaatcgga
     2821 tcgagtgttt cgttttgccc ggcaaaccga tcttcagcgc gcgcatccac gaccaaacgc
     2881 tcatcagtgc cgatattgtt tagtacgtcc tcataggtca ccacgggcat gcctgggccg
     2941 cgatcagaga aattaccctc tgtggccggt gccggcagct ctgactgaac cgggccttca
     3001 tggcgttgcc aagccgccag accgccatct aggaccgcga catcgcgatg accaagccaa
     3061 ttcaacgtcc accacacgcg cgaggcatgc atgccttcac actggtcata caccaccacc
     3121 tggctgtcat cattgacccc cagccggcgc atgacagcca ccacctgttc gcgggtgggc
     3181 agcggatgac gtccgtttgt cccggttttt tgcccaccaa cgtcccgatc taacgacaca
     3241 aaacgcgcac ctggcaagtg acaggcctcg tattgccgct gacccagggt cgggtcgaac
     3301 aaatcgtggc tggcatcaag gacaaccaga ttggacgctg cgtctcgcat cgaaatttgc
     3361 agctcttgca cggatatcag ggtctgataa ttcatggtga tgtttcctcc ggtgaactta
     3421 acgaggttaa cggttagcct ggttcttggc aaaccctcga caacccttgg cacccccgag
     3481 aacccatagc tgtaatgaca tgccggagct taggctaagt gtgtgttagt gtgacttatg
     3541 agttttgata agggttatga attttaggga cgaaggtttg gtttatcttt aggacggctc
     3601 aaaacaaagc gttttgacca gccatcgtcc tacccgttca taccgtaaga atctgagtac
     3661 aacactgcaa tacaccgatc gcgatggata ccaatgagtt ctagtccgtt taactcctac
     3721 aacgtgctct ggaagatcgg cgggcaagtc tttgcagact cggccaccga tcaccgttac
     3781 agaacacaag atttggttca agcaagtcat cctttgcccg gtgacgtcgg cagtggcacc
     3841 ttcaccagtc ttaagttgac cagcggttta tcggtacatc actccgcatt tgagttcaat
     3901 gcagcacgca gcagccagcc tttgtccgca gtggtacaca tggacctaaa agaaccttgt
     3961 ctactcatgc atttcgttct agtcggtggc ctgactcggc atgactacat caaaggcagc
     4021 cggcatcggc ttgcgcctgg tacagcgctc ttgcaatgga ctgagcgcac acactcggaa
     4081 ctcgcttttg atcagttgcc tgcagtagag gtcttgtatg tccacgcaag ccgttcttcg
     4141 cttaacctgt tgttggggcc agagctaacg gaacatttgc aatactcggt tcagacatcc
     4201 aatagcctga tggcgctacc caccaaagtc agtgcaccgc tgagattttg ttttgatgag
     4261 acgctaacag gtccggtacg caaattgcac gcgcagaata aattgctgga gtttcttgag
     4321 caattgattc ggtatttcga tgaaattggc atgcagaggc cggttaacca acgatttagc
     4381 gcctatgcac tcatgcatta ccttaaacaa cgtcccgggc aactgcctcc cgccggtgag
     4441 ctcgcccaac gcttcggggt atctgttggc accatgaacg aggccttcat cgcagcgttc
     4501 ggcatgtcgg tggctagctt tatgaaagag caacgcatga catatgcaca tgagtttctg
     4561 agcaacacca gattaagcgt ggccgaaata gcggcacaac ttggctactc acacgttagc
     4621 aacttcagtg cggcatttag agcatttttt ggatattcgc ctacagagct gaggcggtct
     4681 gcgttgtctg atgaacggtg actcgagtat gttccaacca tttgatcagc ataaaactag
     4741 ctctttgaaa aatcatggtc gccgccctta aaggcaagac cagatcggac gtttccccca
     4801 atcatcagga aagcccattg atcggtgatc caccccgtgt gtaaccatca tctcccgcag
     4861 ccggaccttc cactggtggc ccggactcac gatatccatt aacgcggcca gcatgaccag
     4921 cgtgttgtag atgcgtctgg gctcgtttga actgaaactg ctgagcagtg cgacaggttt
     4981 acggcgtggc acaggcattg tgaccgtgaa gcgccggttc cacagtcggc agtgatgtgc
     5041 gcacagattt cgaatgtggg tgagatgttg caagaagcct ttaagaacac cttggtccag
     5101 accgtatgtg cgagccagca ctgcacgatc cgaggggacc atgtgcgtca cccatcgtga
     5161 cagtgtgcca agcgacatga tttcactgat cgcccaaatg ggtggagatg gcggatgttg
     5221 gtacgtgttc cgatagtgat ggatgaagac ctcatcggac cgcgcgatct cttttttcag
     5281 ttttgtcaga tggagcgcat gcagcttcgg atcactagca tgttttgcat ccagatagct
     5341 atgcggacca tgccggtgag ccatgtgata agcccattgc gctcgcaagg aaacctcaat
     5401 gcgctcagtc gcatcgagca ccagcaaacg aagctctcgg tcaaagatgt acaggttcag
     5461 aacatcatcg aaactggctt gctcagtgaa cctgtgcgta gcatggtctt cctcaaaggg
     5521 caaccagtat ccagtcaatc ggtaatagtt gatgtgggcg agataatgtt gggcacgctc
     5581 cagatcagga acgcggagtc ctcgagactc gagcagctct aattgcgcaa gccatgtgcg
     5641 agcgggcttt gtgaaatcca ctttcacgcc cccacaaata agtaacccgc cggtttgagg
     5701 atgctctggc gagcatagcc ttagcgggta ttgttatcgt tagtgtatct taaaaaccaa
     5761 gctatgcaaa tcaaaactga ctttctatcc aatgggtgtt gctgacaggt gcaggtcgat
     5821 ctattcgagt ggtcgaggtg gcctgaacat gtggaagtga cgattgaacg gaatttcgta
     5881 gcccaaagtg ctaaccgaac caccctgggc atctgcagaa gtcaggaagt gttaaccatg
     5941 tgatcgatac gaactgtcaa ctatgtctcg agtatgtacc tttgaaaatt ggtgccggtg
     6001 aaaggagtcg aaccctcgac cttcgcatta caagtgcgct gctctaccaa ctgagctaca
     6061 ccggcattaa tcacttccaa taaagatcac ttcaaatgaa gcagccgtat tgtaaaagaa
     6121 aaaagcaatc tgcttttgag cgcaaacgcc tcatttaaca attttcaaac ttggccgctt
     6181 gggtttgtct tcagacgatt gcttttgttc actaggctct tgagctgcgg ccgtgcttcg
     6241 atgtgattcg agcgcatcgg acgcggtttg ctccacctca aaacccatac cagtgcccgt
     6301 ctcgcgggcg taaatggccg tcacagcacc cactggcacg aatatctgct caggtttgcc
     6361 accgaaacgc gcttggaatt cgatgaagtc attgccaatc aacaacccgc ctgtagcgac
     6421 ctcactgaca ttgagcgtga tttgaccatc acggacaaaa gctggtggca cgcgacacat
     6481 ctcgttgact tgcaccacga tgtgcggcgt atagccattg tcagtggccc attcatgaag
     6541 cgcacgcagc atgtagggct tggtcgaggt ctctgccata cgggtttcgc ctttgagttt
     6601 cgcccttact agcgacgcat cactttctct gacggcgtca aagcttcaat gtaagccgga
     6661 cgcgagaaaa tacgctcgcc atacttttga atcggggctg ccgttttagg caattcgata
     6721 ccgtagtgat caaggcgcca caacagcggc gccatggcca catctagcat ggtgaactct
     6781 tcgcccagca tgtacttgtt tttgagtaac aacggggcga gttgggacaa acgatcgcgg
     6841 atagctgcgc gtgcagcgtc tagtttcgcg gtctcgccac gggccgtgcg gtcttcgagc
     6901 aaggcaacgt gcacaaacaa ctctttctcg aaattgaaca gaaatagtcg cgtgcgggca
     6961 cgcatcacgg gatcggccgg catgagctgt ggatgaggga accgctcatc aatgtactca
     7021 ttgatgatgt ttgactcgta cagaatcaag tcacgctcaa ccaaaatggg aacctgccca
     7081 taggggttca tgacactgat atcttcgggc ttgttgtaca ggtcgatatc ctgcacctca
     7141 aagtccatat ctttttcata gagggcaaag cggcaacgat gagaaaacgg gcaagtcgtg
     7201 cctgagtaga ggaccatcat ggtgaggtac cgtcctaatg cttaaagtga taaaaaacaa
     7261 aagccagcac cgacccaagg gtgggtgctg gccatagata catcatatta cttgatgtgc
     7321 ttccaatagg tcgcgtttaa gcgccatgcg acgacaaaaa acaaaccaag aaacaccagt
     7381 acccagaaac caatctgctt gcgctttaac tgggatggtt cggccatcca tgtcatgaag
     7441 gcagccaaat cacccatatc gcgatcgtac tgcgcagcgc ggctagggtc tagcggttta
     7501 aaagtgtgtg tctcaccggc ggagcccgag taattatcaa gaatctcggc ctcagcagtc
     7561 cagtagcctt cggtgccgta ctgcttggta attttttccc aaaccatttc accatctttg
     7621 ggcacttggt gaatcaaggt tgaagtcaac tcgcgtggac cttgcgcatc ccacatgacg
     7681 tgaggcatac cggcgttagg gaatgcgagg ttgttccaac cggttggctg agtcgtatca
     7741 cggtaaaacg ttcgcatgta ggtgtagatg taatccccac ctggagggcc tgcgttcttg
     7801 gagcgcgagc gtgcaataac cgacaggtct ggcggtgctg caccaaacca agtcgtgcca
     7861 tcttctttgg tcatggcgat agtcatcaaa tcaccgacct tctcaccagt aaacagcaaa
     7921 ctctctttga tttgctggtc tgtgaggcca atgtcacgca gtttgttgta gcgcagcgat
     7981 ctggcaccat gacaattcag acactggttc acaaaaatct tggcaccatt ttgcaaggct
     8041 gcctgatcat tga
//
LOCUS       DATBNL010000535         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_115752, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000535 DATBNL010000000
VERSION     DATBNL010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115752"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VIC30_09270"
     CDS             complement(<1..415)
                     /locus_tag="VIC30_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY7804604.1"
                     /translation="MTERQADADLVARVQQGDKQAFDLLVLKYQRKIQRLLSRMIRDQ
                     SDIEDVMQETFIKAYRALPQFRGESAFYTWLYRIAINTGRNWLSSQGRRPSAPGLNQS
                     DEGETFDEIDNLTDNNTPESALATQEIASTVNAVIE"
     gene            complement(412..780)
                     /locus_tag="VIC30_09275"
     CDS             complement(412..780)
                     /locus_tag="VIC30_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804605.1"
                     /translation="MTLPTIPMQLVLCAIALPAAWLLVERATHGRRRSGSNVDSTLPE
                     IEFTPERVTCLSDHCGIEAGSVVSVKSVARHGAAWTVNLKPQASGAPAFDITIWRTQI
                     DKEVFRRLAVLIAWHAEKPA"
     gene            complement(915..>1726)
                     /locus_tag="VIC30_09280"
     CDS             complement(915..>1726)
                     /locus_tag="VIC30_09280"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015065093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEY7804606.1"
                     /translation="LVSGQLSIMLGLKGPSYAVVSACTTGLHSIGDAGRLIEYGDADV
                     MLAGGTESTVTPLGVGGFAAMRALSTRNDDPATASRPWDLDRDGFVLGEGAGVLVLEE
                     YEHAKKRGAKIYGELAGYGMSSDAYHITAPDLDGPRRGIMAALRNGGINPDEVHYVNA
                     HGTSTPLGDKNETQALKAAFGDHAKNLVVNSTKSMTGHLLGAAGGIEAVFTTLAVHHQ
                     VSPPTINIFNQDPECDLDFCANEARPMKIDVALSNSFGFGGTNGSMVVRRV"
BASE COUNT          412 a          497 c          446 g          371 t
ORIGIN      
        1 gctcgatcac cgcgttaacc gtgctcgcaa tttcctgcgt cgctagcgct gattcgggcg
       61 tgttgttatc tgttaggttg tcaatttcgt caaaagtttc accttcgtcg gattgattta
      121 atccgggtgc actcggacga cgcccttggg aagacaacca attgcgtcct gtgttgatcg
      181 cgatgcggta gagccaggta taaaaggcgc tttcaccgcg aaactgcggc aatgccctat
      241 aggcctttat aaaggtctcc tgcatgacat cttcgatgtc ggactgatcc cgaatcatgc
      301 gtgagagcag gcgctgaatc ttgcgttggt atttcaacac caacaaatca aaagcctgtt
      361 tgtcgccttg ttgcacacga gcaacgaggt cagcatctgc ttgtcgctca gtcacgccgg
      421 cttctccgcg tgccatgcaa ttagaaccgc cagccttcta aacacttctt tatctatctg
      481 tgtgcgccaa atggtgatgt caaacgcagg ggcgccgctt gcctgtggtt tgaggttaac
      541 tgtccacgcc gcaccatgcc gggcgaccga tttgacagag acgaccgacc cagcctcaat
      601 accgcagtga tccgacaaac aagtcacgcg ctcgggcgtg aactcaattt caggcagcgt
      661 cgagtcaaca ttcgaaccag acctacgccg cccgtgagtc gcccgctcga cgagcaacca
      721 tgccgctggc aaggcaatcg cacacaaaac aagctgcatc ggaatcgtgg ggagcgtcat
      781 caccctttga gccgcgagtg tcacaacaat cgcaaacact ccagctaaca aaactgcctg
      841 caaaaagcag gcagttttgg ttggagcagc cgcgctccaa cgtatcgtcc agagcgaatc
      901 accgttgcgg cgcattaaac ccggcgcaca accatggatc cattggtgcc gccaaagccg
      961 aacgagttcg ataatgcgac atcaattttc atgggtctag cctcgttagc gcaaaagtcg
     1021 aggtcacact ccggatcctg gttgaagata ttgatcgtgg gtggcgacac ctgatgatga
     1081 acggcaaggg ttgtaaagac cgcttcgatt cctccggcgg cacccaagag atggccagtc
     1141 atcgactttg tagaattgac caccaggttt ttggcatggt caccaaacgc ggctttgagt
     1201 gcttgtgttt cgttcttgtc acccaagggg gttgaagtgc catgcgcgtt cacatagtga
     1261 acctcatcgg ggttaatacc cccgttacgt aaagccgcca tgatgccgcg acgaggacca
     1321 tcgagatccg gcgccgtgat gtgataagcg tctgagctca taccataacc ggcaagctca
     1381 ccgtagattt ttgcgccgcg ttttttggca tgctcatact cttcgagcac caatacgcca
     1441 gcgccctcac ccaacacaaa accgtcgcga tcgagatccc aagggcgtga ggcggtggca
     1501 gggtcgtcgt tgcgtgtaga cagcgcacgc atggccgcaa agcccccaac acccaatggc
     1561 gtaaccgtcg attcggtacc accagcgagc atgacgtcgg catcaccata ttcgatcaag
     1621 cgacctgcat cgccaatcga atgaaggcca gtggtgcatg ccgaaaccac agcataagaa
     1681 ggtcctttca accccagcat gatcgacaac tgaccggaga caaggt
//
LOCUS       DATBNL010000536         2660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_175565, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000536 DATBNL010000000
VERSION     DATBNL010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175565"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /gene="ppsA"
                     /locus_tag="VIC30_09285"
     CDS             complement(<1..1383)
                     /gene="ppsA"
                     /locus_tag="VIC30_09285"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEY7804607.1"
                     /translation="MPGGFATTAQAYRDFLAQTGLADRIAERLATLDADDVRALAQAG
                     TEIRQWIVDAPLPKQLDDDIRQAFAELDSDGKGSFAVRSSATAEDLPDASFAGQQETF
                     LNVVGIDDVIDKMRQVFASLYNDRAISYRVHKGFAHADVALSAGIQRMVRSDKGSAGV
                     MFTIDTESGFSDVVFITSSYGLGETVVQGAVNPDEFYVFKPTLAEGHYPIVSRRIGSK
                     LIKMEFDADRSSGHAVRTVDVPVTERNRFSLSDQEIIELAHYAVIIEKHYQRPMDIEW
                     GRDGVDGKLYILQARPETVKSQQSQHDVQLRYRLKATGDVVITGRAIGQKIGSGPVRI
                     VGDVSEMDKVQAGDVLVTDMTDPNWEPVMKRAAAIVTNRGGRTCHAAIIARELGIPAV
                     VGCADATDVLKEGQSVTVSCAEGDEGRIYDGLIETEVEEVKRGDMPPVDLKVMMNVGN
                     PQLAFDFAQIP"
     gene            1713..2549
                     /locus_tag="VIC30_09290"
     CDS             1713..2549
                     /locus_tag="VIC30_09290"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013212607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HEY7804608.1"
                     /translation="MTDTARIERTVFIISDGTGITAETFSHSVLSQFDSVKFNQVRIP
                     FVDTMDKADEVIERINHVAAIGAQPIAFTTLVNTELSTRIKTANALFLDLFAGFVEPL
                     EQALGVRSSHSIGKSHKVANSAQYRNRIDAINYSLAHDDGQFVKGLSEADVILVGVSR
                     CGKTPTSLYLAMQYGVKAANFPLIPEDFERGALPSTLHPYRSKLFGLTIQPERLAEVR
                     QERRPDSKYASLPQCLHEVGEAERLMRMENIPSLSTTTKSIEEIATTILHEIKLDEHQ
                     AY"
BASE COUNT          650 a          727 c          665 g          618 t
ORIGIN      
        1 ggggatctgc gcaaaatcaa atgccagttg tggattgccc acgttcatca tgacctttaa
       61 gtcaaccggc ggcatgtcgc cgcgcttgac ctcttcgact tcagtctcga tcaaaccatc
      121 gtagatacga ccttcatcgc cttcggcaca tgacaccgtg accgattgcc cttcttttag
      181 aacatcggtg gcatcagcac accccacaac ggcaggaatg ccaagctcac gggcaataat
      241 cgcggcatgg caagtgcgcc caccgcggtt ggtcacaatg gcagcagcac gcttcatgac
      301 cggctcccag ttcggatcag tcatatctgt gaccagcaca tcaccggcct gaactttgtc
      361 catctctgag acatcaccca cgatacgaac cggccctgaa ccaatctttt gtccgatggc
      421 gcgacccgtg atcacaacgt cgccggtggc ttttaaacga taccgcaact gaacatcgtg
      481 ctgcgattgc tgggacttaa cggtctcagg acgtgcttgc aaaatgtaga gtttgccatc
      541 tacaccatca cggccccact caatgtccat ggggcgctgg tagtgttttt caatgatgac
      601 ggcgtagtgc gcaagctcga tgatctcttg gtcgctgagc gagaagcggt tgcgctcggt
      661 gacaggcaca tctaccgtgc gaaccgcgtg accgctgctg cgatctgcgt cgaactccat
      721 tttgatgagc ttagaaccga tacgacggct cacaatcgga tagtgaccct cagccaacgt
      781 tggcttaaag acatagaatt cgtcgggatt gacggcacct tgcaccacgg tttcaccaag
      841 accataagac gaggtaatga acacgacgtc tgaaaacccc gattccgtgt cgatggtgaa
      901 catcacacca gcgctgccct tgtcggagcg aaccatgcgt tggataccgg ctgacagtgc
      961 cacatcggcg tgtgcaaacc ccttgtgcac gcgatacgaa atggcacggt cgttatagag
     1021 cgatgcaaat acctgacgca tcttgtcgat gacatcatcg atgccaacca cattcaaaaa
     1081 ggtctcttgc tgacccgcga aagatgcatc gggcaagtct tcggcagttg ccgatgaacg
     1141 caccgcaaac gaacctttgc catctgaatc gagttcggca aatgcttgac gaatatcatc
     1201 atcgagttgc ttaggcaaag gtgcatcaac aatccactga cgaatctcgg tgcctgcttg
     1261 agcaagcgca cgcacgtcat cggcgtctag agttgctaag cgttcagcaa tgcgatcagc
     1321 taagccggtt tgcgccagaa agtctctgta ggcttgtgcg gtggtcgcaa atcctccagg
     1381 cacccgaacc ccggcatctc aaagctggct gatcatctca ccgagtgatg cgttcttgcc
     1441 tcctacagta tcaacatccg tcatgcggag ctgatcaaat ggtacgacat atgacatgga
     1501 gtcaccttta aacaatgaat ggaaagcgag tttggtcagt ccacagttgg cacaaaggcg
     1561 ataaactgac caaaccggcc ttggtctggc tggcaagata tcaatctatg ccgccaagtc
     1621 cattgtgttg ccagcgcatt aatacgctcg gcggcgactc cggtttctgc atggcattgt
     1681 agcgccacat ttgactcttt gaggacgcaa aattgactga tacggctcgt attgaacgca
     1741 cggtttttat catttctgat ggcactggca tcactgctga gactttcagc cattctgtct
     1801 tgtcacagtt tgattcggtg aagttcaatc aggtgcgtat tccctttgtg gacaccatgg
     1861 acaaagccga tgaggtcatt gagcgaatta atcatgttgc agccatcggg gcacaaccga
     1921 ttgcgttcac caccttggtt aacaccgagc tgtcaacccg cataaaaacc gccaacgcac
     1981 tatttcttga cctatttgcc ggctttgttg aaccacttga gcaagcactt ggcgtgcgtt
     2041 ctagccacag cattggcaag tcgcacaaag tggccaattc cgcacaatat cgcaatcgaa
     2101 ttgacgccat caattacagt cttgcgcacg acgatggtca gttcgttaag ggtttgtcgg
     2161 aagctgacgt gattctcgtt ggggtgtcgc gttgtggtaa aacgccaacg agcctttacc
     2221 tggcaatgca atacggcgtg aaggctgcca attttccgtt aatccctgaa gattttgagc
     2281 gcggcgcttt accaagtacc ttacacccgt atcgatctaa actgttcgga ctgacgattc
     2341 agccagagcg gcttgccgaa gtaaggcaag aacgtcgccc tgacagcaaa tatgcctcgt
     2401 tgccacagtg cttgcacgaa gtcggtgagg ccgagcgcct gatgcgcatg gagaacatac
     2461 cgtcgctgtc gaccaccacc aagtcaattg aagaaattgc caccaccatc ttgcacgaga
     2521 tcaaactaga cgagcatcag gcttattgag caccgtttag actttggcgg cgttgttcga
     2581 acagacaaat ggcagcggca ctagccacat tgagtgagtc gactgcgttc gtttcgtgag
     2641 ggatatagac cgattggtca
//
LOCUS       DATBNL010000537         3166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_106244, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000537 DATBNL010000000
VERSION     DATBNL010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3166
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106244"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..1651
                     /locus_tag="VIC30_09295"
     CDS             170..1651
                     /locus_tag="VIC30_09295"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF006673.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEY7804609.1"
                     /translation="MSALTPITVARGDGIGPEIMDATLRVLEAAGAKIAPEFIEIGQS
                     QYLSGYSAGINPSAWESLRRTKVFLKSPITTPQGGGFKSLNVTIRKTLGLYANIRPCV
                     SYAPFVSTLHPDMNIVIVRENEEDLYAGIEHRQTDEVYQCLKLITRPGCERIVRYAFE
                     YALRHGRRHVTCMTKDNIMKMTDGLFHQVFDEIAPQYPTIETDHMIIDIGAARLATKP
                     NRFDVIVTPNLYGDIISDIAAELTGSVGLAPSANIGEHCAMFEAIHGSAPDIAGQEVA
                     NPSGLLLAGVLMLVHIGQPAVAQTIHNAWLCTLEQGIHTQELNVNAANNDAVSTSAFA
                     QAVIDRLGQLPKQLPTAHYTTESSGSDKQASATSSKLDYTPPVRGEPAVKRLVGVDVF
                     VHAPAVSADFLAGQLSALTTEAFELQMITNRGVKVWPGGFAETFCTDHWRCRFAAPAD
                     KQVSHAEIIELLKALTEREIDVIKTENLCTFDGERGYALGQGQ"
     gene            complement(1676..>3166)
                     /gene="glpK"
                     /locus_tag="VIC30_09300"
     CDS             complement(1676..>3166)
                     /gene="glpK"
                     /locus_tag="VIC30_09300"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018905929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEY7804610.1"
                     /translation="SYILALDQGTSSSRSIIFNENGQIVAMAQREFPQIFPKPGWVEH
                     DPFEIWSSQLDTARQALAKANLSAKAITAIGITNQRETTVAWHKKTGVPVYNAIVWQD
                     RRAEPVCAQLRQQNLGKHVAQTTGLLIDAYFSATKLHWILENVPKARALAQQCDLAFG
                     TVDSWLIWQLTGGASHVTDVSNASRTMLFDITRNQWDPKLLDALQIPESVLPNVLPSS
                     AAFGETDRAIFGESIPIGGVAGDQQSALFGQACFKPGMAKNTYGTGCFMLMHTGGLSQ
                     NSKNGLITTSAAQPTQTPQYALEGSIFIGGAVVQWLRDGLRAIASSSDVQPLAESVPD
                     AGGVMFVPAFTGLGAPYWAPDARGTIVGLTRGTTIAHIARAALESIAFQSAALLQAMN
                     RDVVAAGGVSVSELRVDGGACVNDLLMQIQADLLGIPVVRPAVIETTALGAAYLAGLH
                     TGTYKSLQDLGDQWQVQRTFHPTLPRDQAHERMHRWEQAVRQATVS"
BASE COUNT          770 a          884 c          807 g          705 t
ORIGIN      
        1 gcaaccgagc cactgcctcg acggttctca gctgattgaa cgtaacgcga ggtgtacgaa
       61 tcttattcat aggtataaac ctatcatatt tattaaaaat gattgttttt atttaatctg
      121 tttctacaac aaaatgacga tgtttcaacc aacaaatgag agatgaatca tgagcgcact
      181 aacccctatt accgtagccc gcggcgatgg cattggtcct gaaatcatgg atgccaccct
      241 acgcgttcta gaggctgctg gcgccaagat cgcccccgag tttatcgaga ttggtcaaag
      301 ccagtatctg tctgggtata gcgcaggtat taatccgagc gcctgggaaa gtttgcgcag
      361 aaccaaagtc tttctgaagt cgcccatcac cacaccacaa ggcggtggct tcaaaagtct
      421 aaatgtcacg atccgcaaaa ccttggggct gtacgccaac attcgcccgt gcgtcagcta
      481 tgcgccgttt gtctcaacgc tacatcccga catgaatatc gtcatcgtcc gggaaaacga
      541 agaagaccta tacgccggca tcgaacatcg gcaaaccgat gaggtgtacc agtgcctaaa
      601 actcatcaca cggcctggct gcgaacggat tgtgcgctat gcctttgagt acgccttgcg
      661 tcatggacgc cggcatgtca cttgcatgac caaagacaac atcatgaaaa tgaccgatgg
      721 cttgtttcac caagtcttcg atgagattgc accgcaatat ccaacaatcg aaactgacca
      781 catgatcatc gatatcggtg ccgctcgcct agcaacgaaa ccaaaccgct tcgatgtcat
      841 tgtgacccct aacctgtacg gcgacatcat ctctgacatc gccgccgaac ttactggctc
      901 ggttggttta gcaccaagcg caaacatcgg tgaacattgt gcgatgttcg aggccattca
      961 cggcagtgcg cccgatattg ccggccaaga agtcgccaac ccctcggggc tattgctcgc
     1021 tggggtgctg atgctggttc atattggtca acccgcagta gcgcaaacca tccataatgc
     1081 atggctttgc acccttgagc agggcattca tacgcaagag ctcaacgtca acgccgccaa
     1141 taatgacgca gttagcacca gtgcatttgc ccaagcagtc attgatcgtc tgggccaatt
     1201 acccaaacag ttacccacag cccactacac gactgaatca tcgggttcag acaaacaggc
     1261 gagcgcaaca tcatcgaaat tagattacac accgccagtg cggggtgagc ctgccgtcaa
     1321 gcggttggtt ggtgtagatg tttttgtcca tgcgcctgct gtctcagccg acttcctagc
     1381 tgggcagcta agcgcgctca caaccgaggc gttcgagttg caaatgatca ctaatcgagg
     1441 cgtaaaggta tggccgggtg ggtttgccga gacattttgt accgatcatt ggcgctgtcg
     1501 gtttgccgca cccgcggata agcaagtcag tcacgccgag atcatcgagt tactcaaagc
     1561 gctgactgag cgtgaaatag atgtcatcaa aaccgagaac ctctgcacct ttgatggtga
     1621 acgcggctat gcgctcgggc aagggcagta aatctgatgc atcgggcggc gtcttttaag
     1681 ataccgtcgc ctgacgcacc gcctgctccc agcggtgcat gcgttcatgc gcttggtcac
     1741 gcggcagcgt tggatggaac gtgcgttgaa cctgccattg atcgccaaga tcctgcaagc
     1801 tcttgtaggt cccagtgtgc aacccagcga ggtaggccgc gccaagcgct gtggtctcaa
     1861 tcacggctgg ccgcaccacg ggaatgccaa gcaagtcagc ctggatttgc atgagtaagt
     1921 cattgacaca agcgccacca tcgacacgca gttcactaac cgacacgccg ccggcagcca
     1981 cgacatcacg gttcatggct tgcaataaag cagcgctttg aaacgcgatg ctctcaagcg
     2041 ctgcgcgtgc gatgtgggca attgtggtgc cacgcgtcaa ccccacaatc gtgccacgtg
     2101 catccggtgc ccagtaaggc gcacctagcc ctgtaaacgc aggcacaaac atgacgccac
     2161 cggcatcagg cacgctttcg gccaaaggct gtacatctga gctcgaggcg attgctcgca
     2221 acccgtcgcg cagccactgc acgactgcac caccgatgaa gatactaccc tcaagcgcat
     2281 actgtggcgt ctgcgttggt tgtgctgcag aggtagtgat caaaccgttc ttgctatttt
     2341 gtgaaagtcc accggtgtgc atgagcatga agcaacccgt gccatacgtg ttcttagcca
     2401 tacccggctt gaaacacgct tgaccgaaca aggcactttg ctgatcaccg gcaacaccac
     2461 caatgggaat cgactccccg aaaattgctc tgtcagtctc tccaaacgcg gcacttgaag
     2521 gcagtacatt cggcagcacc gactccggta tttgcaacgc atctagcaac ttggggtccc
     2581 attgattgcg cgtaatatca aacaacatgg tgcgggacgc gttactgacg tcggttacgt
     2641 ggctagcacc accagtcagt tgccaaatca gccaactatc aacggtacca aatgccaaat
     2701 cacactgctg cgccaacgcg cgagccttgg gtacattctc caatatccaa tgtaatttgg
     2761 tggcagagaa gtaggcatca atcaacagtc ccgtggtctg cgccacgtgc ttgcccaagt
     2821 tttgttggcg caattgcgcg caaacgggtt cggcacggcg gtcttgccaa acaatggcgt
     2881 tgtagacggg tacccctgtt tttttatgcc aggctactgt ggtttcacgc tggttggtta
     2941 taccaatagc ggtgatggcc ttggctgaca ggttggcttt ggccaatgcc tggcgagctg
     3001 tgtctagctg actgctccag atctcaaagg ggtcatgctc gacccaacct ggcttaggaa
     3061 agatctgggg gaattcgcgc tgcgccatgg ccacgatctg accattttca ttaaaaataa
     3121 tactgcgcga actagatgtt ccttggtcaa gtgcgaggat gtaaga
//
LOCUS       DATBNL010000538         3342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_156127, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000538 DATBNL010000000
VERSION     DATBNL010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156127"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..884)
                     /locus_tag="VIC30_09305"
     CDS             complement(<1..884)
                     /locus_tag="VIC30_09305"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY7804611.1"
                     /translation="MKKPISLMTFALASAFVASAAVAQTNDIGLPSTLAWSAYGVGSG
                     GYNQSVAIGNAFKQKYGVNLRVLPGKNDVSRTLPLREGKVQFSANGVGGSYMAQEGFY
                     DFGTESWGPQPVRALMLNNSNQVLTAVAAGDAGINTPADMKGKKVAWVIGAPALNQNI
                     TAILAFANLTWDDVEKVEFGGFGESLDGVASGRADAAFTSSISGKAYALEKSPRGIQY
                     PVMDPNDTAGWKRLNAIAPFFYPAEGTEGAGISPENPAISAAYPYPVLMTYANQDPKL
                     VTAVMTAMVDTYDTYKGAA"
     gene            1061..1570
                     /locus_tag="VIC30_09310"
     CDS             1061..1570
                     /locus_tag="VIC30_09310"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEY7804612.1"
                     /translation="MTRNTIDNSQHGLGNDNLPDSGAGERTGKRDVASPVHVFTYGSL
                     MYEDIFAGVTQCQAIPMAARLNHWARHGLRAREYPGALPEPSGQSYIDGVVWLNVTEQ
                     ALARLDQFEGSEYERVVVTVQATEGTTYLAQVYQWQLPAEVSGQWCVQTFEQLHRDRF
                     LHVHSQRRV"
     gene            1768..2163
                     /locus_tag="VIC30_09315"
     CDS             1768..2163
                     /locus_tag="VIC30_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804613.1"
                     /translation="MLIYFALYLVLVTGVSYLPILVTRKYAPPYFWRWTMLVTGTGPL
                     LSLLSIAGFALVAPDGGGFDSFMMTSLFLLILIIPFQLLVPMTVYMFICSSLKERRAA
                     MLAEPGGGYAEHPDHHPHSSLTNRPNHPD"
     gene            2304..2549
                     /locus_tag="VIC30_09320"
     CDS             2304..2549
                     /locus_tag="VIC30_09320"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HEY7804614.1"
                     /translation="MLTPSTTPTLPLAMSTAGTRLKIAAISGGHGLKLKIAEMGLNPG
                     TEIELRQHERGAVVISAGNTRYALGAAMAHRIMVQAI"
     gene            2592..2822
                     /locus_tag="VIC30_09325"
     CDS             2592..2822
                     /locus_tag="VIC30_09325"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HEY7804615.1"
                     /translation="MTTLGDLVAGDKATVLGLAKDSGGYRRKLLAMGLTPSTPLAVVR
                     IAPMGDPFEIRARNCHVTLRREEANLIQVEKL"
     gene            2822..>3342
                     /locus_tag="VIC30_09330"
     CDS             2822..>3342
                     /locus_tag="VIC30_09330"
                     /inference="COORDINATES: protein motif:HMM:NF014474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB small GTPase domain-containing protein"
                     /protein_id="HEY7804616.1"
                     /translation="MQTADRCIVGLIGNPNCGKTTLFNALTGGKQRVGNWPGVTVERK
                     SGEYRFENRTYEVVDLPGTYSLDISDQAISLDELVARQFVEQDGADLIINILDASNLE
                     RNLYLTTQLADMGAALLVVVNMLDVAQARAMQVDIDKLAAQLGCPVVPMVASQGKGLQ
                     ALRQAIAQAVVSP"
BASE COUNT          824 a          928 c          835 g          755 t
ORIGIN      
        1 gctgcgcctt tgtaggtgtc ataggtgtcg accattgcgg tcatcactgc tgtcaccagc
       61 ttggggtctt ggttagcata ggtcatcagc acgggatacg gatacgcagc agaaatcgct
      121 gggttttccg ggctaatacc agcgccttcc gtgccttcgg ctgggtaaaa gaatggcgca
      181 atcgcattca agcgcttcca accggccgtg tcattgggat ccatcaccgg gtattgaatg
      241 ccgcgaggtg acttttccag tgcatacgcc ttgccagaaa tagatgaagt gaaagccgca
      301 tcggcgcgac cgctagcgac accatcgagt gactcgccga acccaccaaa ctcgactttt
      361 tcaacatcat cccaggtcaa gttggcaaat gccaagatag cagtgatgtt ctggttcaaa
      421 gctggtgcac caatcaccca agcaactttc ttgcctttca tgtcagcggg ggtattgatg
      481 ccagcgtcgc cggctgccac agcggttaac acctgattgg agttattgag catcaaggcg
      541 cgcacgggtt gtggccccca actctcagtg ccaaagtcat aaaacccttc ctgagccatg
      601 tagctaccgc ccacaccgtt ggccgaaaat tggactttgc cttcgcgcag tggcaaggta
      661 cgcgaaacat cgttcttgcc aggtaagacg cgtaaattaa cgccatattt ctgtttaaac
      721 gcgttaccga ttgccactga ctggttatat ccgcccgatc ccacgccata ggcgctccag
      781 gcaagcgtcg atggcaagcc aatatcattg gtttgtgcta ctgccgcgct agccacgaac
      841 gcgctggcca atgcaaatgt catcaaactg atgggttttt tcatgaaagc ctccgttaga
      901 gtagacgggg gctatccacc cattggtgcc cccgtttata aagtctcggc tttagccgtt
      961 attattttgc tcaaccgagt gtatcggaaa agatctgtcg cactagttga gtgttttccc
     1021 caacaaaagt gacttaatga gagccataaa gcaacgcaac atgacacgca acacgatcga
     1081 caactcacaa catgggctcg gcaatgacaa tttgcccgat tcaggggctg gagaacgcac
     1141 tggaaaacgg gatgtcgcaa gtccggtaca cgtcttcacc tacggctcac tgatgtacga
     1201 ggatattttt gctggtgtca ctcaatgcca ggcaataccc atggccgcgc ggctaaacca
     1261 ctgggctcgc cacggcctac gggcacgaga atatccaggc gcactgcctg agcctagtgg
     1321 tcagtcgtat atcgacggcg ttgtatggct aaatgtcacc gaacaggcat tggctcgcct
     1381 ggatcaattc gagggttctg agtacgaacg tgtggttgtc accgtccagg ccacggaggg
     1441 aaccacctat ttggctcagg tctaccagtg gcaactgccg gccgaagtgt cagggcaatg
     1501 gtgcgtacag accttcgagc agctgcatcg cgaccgattt ctacacgtcc atagtcaaag
     1561 gcgcgtttga atcgcaaagg cgctggccaa acaaaacccg gcaatgcaag caaaaacaaa
     1621 agggacaagc cccgcgtaaa cgctaaggtt tattacacta cgggctacaa attaaactaa
     1681 tgcagtccct taagtcgtcg ctgtgcaagt gacccggcaa gtgaccttgt aaacaaccac
     1741 ttaagcaatc acacaagcaa cctccttatg ctgatctatt ttgcgctgta cctagtgcta
     1801 gtaaccgggg tcagttactt accgattctg gtcacccgca agtacgcacc gccctacttc
     1861 tggcgttgga ccatgcttgt taccggaacg ggtcccttgc tgtctttatt aagcatcgcg
     1921 ggtttcgcgc tcgtggcccc cgatggcggg ggcttcgact cttttatgat gacgagtctg
     1981 tttctgttga tacttattat ccccttccag ttgctcgtgc caatgactgt ctacatgttt
     2041 atttgcagca gcttgaaaga aaggcgagcc gctatgctcg ccgaaccggg tggcggatac
     2101 gccgaacacc ctgaccatca cccccatagc agcctcacaa atcgccctaa ccaccctgat
     2161 taatcacgga aattttgcgt actggcacgc ttgattagtt tcgcattgat ctgtaacaag
     2221 aatgatttgc atttacttgt gtataattca ttatcaactt gataatgagt ttgaataatt
     2281 cacacgatag gtaaaaccaa atcatgctga ccccatccac gacaccaacc ctgccactgg
     2341 ccatgagtac tgccggcacg cgcctaaaga ttgctgccat ttcgggcggc cacggcctca
     2401 aactaaaaat cgctgaaatg gggctcaacc ccggcactga gatcgaactg cgtcagcacg
     2461 aacgtggcgc cgtggtcatt agcgccggca acacgcgcta cgcgcttggc gcagccatgg
     2521 cccatcgaat catggttcaa gccatctgaa cttgcacccc taccctcaat aaacaaccga
     2581 gaccaacaag catgacaaca cttggcgatc tggtggcagg cgacaaagcc accgttcttg
     2641 gcttagccaa agacagcggc ggttaccgca gaaaattact agccatgggg ctcacgccct
     2701 caactcccct agcagtggtt cgtatcgccc ccatgggcga cccctttgaa atccgagcac
     2761 gtaattgcca cgtgacgctg cgacgcgaag aagcgaactt gattcaggtg gagaaacttt
     2821 gatgcaaaca gctgatagat gcattgtggg attaatcggc aatccaaatt gcggcaaaac
     2881 cacgttattt aatgcgctca ccggtggcaa gcaacgcgta ggcaactggc ctggcgtcac
     2941 cgttgaacgc aaaagcggtg aataccggtt tgagaatcgc acatatgagg tagttgacct
     3001 gcccggcacc tactccttgg atatcagtga ccaggcaatt tccctagacg agttggtggc
     3061 tcgccaattc gttgaacaag acggtgcgga tttaattatc aacatcttgg acgcatcaaa
     3121 cctcgagcgc aacctgtatc tgaccacgca gctcgctgac atgggtgcag ccttgcttgt
     3181 ggttgtcaac atgctcgacg tggcacaagc gcgcgcgatg caagttgaca ttgacaaact
     3241 cgcggcccaa ctaggatgcc cggttgtgcc catggtggcc tcacaaggta aaggtctgca
     3301 agcgttacga caggcaatcg cacaggctgt ggtgtctccc ca
//
LOCUS       DATBNL010000539         2434 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_66402, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000539 DATBNL010000000
VERSION     DATBNL010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66402"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..367
                     /gene="rplV"
                     /locus_tag="VIC30_09335"
     CDS             26..367
                     /gene="rplV"
                     /locus_tag="VIC30_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003304070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEY7804617.1"
                     /translation="MEATAKLKGARISAQKVRLVADQIRGLSVEKADELLAFSTKKAA
                     HIVRKVLMSAVANAEHNKGADIDELKVGTIMVDEGATLKRGRARAKGRYTRILKRTSH
                     ITIVVSEQDKG"
     gene            371..991
                     /gene="rpsC"
                     /locus_tag="VIC30_09340"
                     /pseudo
     CDS             371..991
                     /gene="rpsC"
                     /locus_tag="VIC30_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529946.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
     gene            1060..1473
                     /gene="rplP"
                     /locus_tag="VIC30_09345"
     CDS             1060..1473
                     /gene="rplP"
                     /locus_tag="VIC30_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013340739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEY7804618.1"
                     /translation="MLQPKRTKFRKQQKGRNRGLAQVGNRVSFGEFGLQATTRGFITA
                     RQIESARRAITRHVKRGGKLWIRVFPDKPITKKPVEVRMGKGKGNVEYWVAPVQPGRM
                     IYEIQGVTEPVAREAFRRAAAKLSVRTAFVSRTMG"
     gene            1470..1679
                     /gene="rpmC"
                     /locus_tag="VIC30_09350"
     CDS             1470..1679
                     /gene="rpmC"
                     /locus_tag="VIC30_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019451024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEY7804619.1"
                     /translation="MKASELRQKAAPELNDMLIKLRKEQFDLRMQKASGSLTNPKEMM
                     RVRREIARIKTVLNESANKEQDKAS"
     gene            1676..1960
                     /gene="rpsQ"
                     /locus_tag="VIC30_09355"
     CDS             1676..1960
                     /gene="rpsQ"
                     /locus_tag="VIC30_09355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006464925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY7804620.1"
                     /translation="MSDVNKEGVEAQTKVNRSQVGRVVSDKMDKTVTVRLERLVKHPL
                     YGKYIRRSSKVHAHDETNDCREGDTVRIAETRPTSKTKSWQVIEVVERAQ"
     gene            1988..2356
                     /gene="rplN"
                     /locus_tag="VIC30_09360"
     CDS             1988..2356
                     /gene="rplN"
                     /locus_tag="VIC30_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY7804621.1"
                     /translation="MIQMQSRLSAADNSGAREVMCIKVLGGSKRRYANIGDVIKVTVK
                     DAIPRGKVKKGEVYNAVVVRTAKGVRRRDGSLIRFDGNAAVLLNAKLEPIGTRIFGPV
                     TRELRSERFMKIVSLAPEVL"
BASE COUNT          642 a          516 c          728 g          548 t
ORIGIN      
        1 tcgaagtaat taggaataga cgctcatgga agccactgca aaactcaaag gtgcccgtat
       61 ctcagctcag aaagtgaggt tggttgctga tcaaataaga ggtttgtctg ttgagaaagc
      121 agacgagctt ttggccttta gtacgaaaaa ggcagctcat attgttcgca aagtgttgat
      181 gtcggctgtt gcaaatgccg agcacaacaa gggcgctgat atcgatgagt tgaaggtcgg
      241 caccatcatg gttgatgaag gcgccacact gaagcgtggc cgtgccagag caaaagggcg
      301 ctatacgcgg attctgaaaa gaaccagcca catcacgatt gtggtgtcag aacaggacaa
      361 gggttaaacc atgggtcaaa aagtacatcc aaacggtatt cgtctgggca tctcaaaaga
      421 ctggtccgca aagtggtacg ccgaaggcga gaactacgct gactatctga atactgacct
      481 gaaagcccgg gcgttcttgc aaaaggaact ggcgcaggca gcggtgagtc atattcagat
      541 tgagcgcccg gcgaaatcgg ccgagatcac tgtgcatact gctcggcctg gaatcgtgat
      601 tggcaaaaaa ggcgaagaca tcgatcgttt gcgcgccaag ctcagccaaa tcatgggtgt
      661 gccaacgcac attcgggtca atgagattcg taagccagag ctggatgcca aattggttgc
      721 agattcgatt gcgcaacagc tagagcgtcg cgtcatgttt cgtcgagcga tgaagcgtgc
      781 agtgggcaat gccatgcgtt tgggtgcttt gggcatcaag gttcaagtgg cgggccgttt
      841 gaatggcgca gacattgcca gaacggagtg gtatcgcgag ggccgagtgc cccttcatac
      901 cctgcgtgct gatgttgatt atgggactgc tgaggctgcg acaacttacg gcatcatcgg
      961 tatcaaagtt tgggtttaca agggcgatgt ctttgacttg cataaggaag tcaaagaaga
     1021 tgcagcgccc ggtcgtggtg gacgtaagga gagctaatca tgttgcagcc aaaacgtacc
     1081 aagtttagaa agcaacaaaa aggccgcaac cgcgggcttg ctcaggtggg gaaccgcgtg
     1141 agtttcggcg agtttggttt acaggccacc acgcgtggat ttatcactgc ccgccagatc
     1201 gagtctgctc gtagagccat tactcgtcac gttaagcgtg gcggaaagtt gtggatccgg
     1261 gtgtttcccg acaagccaat taccaagaag cctgttgaag ttcgtatggg taaaggtaag
     1321 ggtaacgtcg agtattgggt tgcgcctgtt cagcctggtc ggatgatcta tgaaatccaa
     1381 ggcgtgacag agcctgtggc tcgtgaggct tttcgccgtg cggctgctaa attgagtgtc
     1441 agaactgcat ttgtgtcgag gacgatggga tgaaagcgag cgaacttcgt caaaaagctg
     1501 cgcctgagct gaatgatatg ttgatcaagc ttcgtaaaga acagtttgat ttgcgtatgc
     1561 aaaaagccag tggctcattg accaatccaa aagagatgat gcgtgtccgt cgtgagattg
     1621 ctcgtatcaa gaccgttctc aatgagtcgg cgaataaaga acaggataaa gcgtcatgag
     1681 tgatgtgaac aaagaaggcg ttgaagctca aacaaaggtg aaccgtagcc aggttggtcg
     1741 tgttgtgagt gacaaaatgg ataaaactgt gaccgttcgc ctcgagcgtc ttgtgaagca
     1801 ccccttgtat ggtaagtaca ttcgccgttc aagcaaggtc cacgcacatg atgagaccaa
     1861 cgattgccgt gaaggcgaca cagtacgtat tgcagagacc cgaccaactt ccaagaccaa
     1921 atcttggcaa gtgattgaag tggttgagcg ggcccagtaa gtcgattgat gagcggagtg
     1981 aactgaaatg attcagatgc aatcgagact atcagcagcc gataacagtg gcgcgcgtga
     2041 agtcatgtgt atcaaggtgc tgggtggctc taagcgacgc tacgccaata ttggcgacgt
     2101 cattaaggtg actgttaaag acgccattcc tcgcggaaaa gtaaaaaaag gcgaggttta
     2161 taacgccgtg gtggttcgta ctgctaaagg cgtgcgtcgt cgtgatggct cgttgattcg
     2221 gttcgatggt aatgcggcgg ttttgctgaa tgccaagctc gagccaattg gcacacggat
     2281 ttttggccca gtgacgagag agttgcgttc agagcgattc atgaaaatcg tttctctggc
     2341 gcctgaagtg ttgtaaggag aggatgatgg aacgcattcg caaaggcgat gaagtgattg
     2401 tgatcgccgg gcgcagcaag ggccagcgtg ggca
//
LOCUS       DATBNL010000540         4998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_36405, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000540 DATBNL010000000
VERSION     DATBNL010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4998
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36405"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(451..4224)
                     /gene="metH"
                     /locus_tag="VIC30_09365"
     CDS             complement(451..4224)
                     /gene="metH"
                     /locus_tag="VIC30_09365"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEY7804622.1"
                     /translation="MSYPNLPYPIESYTRDQAFVRALAKRILILDGAMGTMLQRYKLA
                     ESDFRGQRFAEHGKDLKGNNEILSLLRPDIIREIHDQYFAAGADVIETNTFGATTVAQ
                     SDYDLPELAYEMNVESAKLACQARDAYSTEDHPRFVAGALGPQPKTASISPDVNDPGA
                     RNVTFDELRVAYAEQVNGLLDGGVDLLLLETIFDTLNAKAAIFAIEEVFEARGERLPL
                     MISGTVTDASGRILSGQTVEAFWNSVRHARPVTIGLNCALGAALMRPYVAELAKICDT
                     YVCVYPNAGLPNPMSETGFDESPEDTSNLLEEFAQSGLVNMAGGCCGTTPEHIEAITS
                     KVAGLTPRVVPEIACRTRLSGLEALNFDGDSLFINVGERTNVTGSKMFARLIREENYD
                     EALAVARQQVENGAQIIDINMDEAMLDSQACMHRFLNLVASEPDISRVPVMIDSSKWA
                     VIEAGLKCVQGKPVVNSISLKEGEAPFLEQAKLCRRYGAAVIVMAFDEQGQADSLARR
                     QEICQRAYDLLIKEVGFPPEDIIFDPNVFAIATGIEDHDHYAVDFIEATRWIRANLPH
                     ARISGGISNVSFSFRGNEPMREAIHTVFLYYAIKEGLSMGIVNAGQLGVYAELDKALR
                     DMVEDVVLDRQTPVGMTEASDDRTNTERLVAFADTVKGSGAKREEDLAWRAEPVEHRL
                     THALVRGITTFITEDTEEIRQQVADRGGRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQ
                     VVKSARVMKQAVGHLVPYIEEEKRQIADAGGDVRAKGKIVIATVKGDVHDIGKNIVTV
                     VLQCNNFEVVNMGVMVPAAKILECAKQENADIIGLSGLITPSLEEMATVAAEMQRDEY
                     FRSRKTPLLIGGATTSRVHTAVKIAPHYDGPVIYVPDASRSVGVAQNLVSDNAQAYLD
                     NLAEEYETVRQRHAQRQATPLISLADARAGKPQFDWANYQPPKPKFIGRRLFKNFDLA
                     ELAKYIDWTPFFQTWSLFGSYPKILEDEVVGEQAQKVFADGQAMLKRMVDGRWLTANG
                     VVAFYPANTVNDDDIEVYTDDSREEVLFTWRGLRQQGVKREGVTNKCLSDFIAPKSSG
                     VKDYIGLFAVTAGVGIQKKEQEFDKAQDDYSAIMFKSLADRLAEAFAEALHARVRRDL
                     WGYASDETLSNDELIAEKYVGIRPAPGYPACPEHVVKRDMFDVLRADDIGMELTESFA
                     MDPAASVCGFYFSHPESQYFNVGLIGEDQLRDYQERSARTEKDLRSSLAPVIG"
     regulatory      4338..4531
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            4604..>4998
                     /locus_tag="VIC30_09370"
     CDS             4604..>4998
                     /locus_tag="VIC30_09370"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY7804623.1"
                     /translation="MHSTLPKRAAVVVVCAFSTPAFAQISSTSPIELDPIMVTATRSP
                     EPLQSTIGDNSVVTRESLDQTPQASFAEVLSRQHGITYIDRGGPQSVSAISLRGTNSK
                     QSLVLIDGMRVNSPTNGLPAINAIPLNAI"
BASE COUNT         1173 a         1465 c         1236 g         1124 t
ORIGIN      
        1 tttggcagcg ttaatgatgg cgattcatcg ctccaatcaa gagggtctgc cggtgctgct
       61 cattggcact ggtctgccta aagtcgctcg tcttgccggc gatgccaaac cgtatgccga
      121 gcgattcttt cactacgcaa atgttgaacc cgatttccac tgatttggat tgagttgcgt
      181 taacagccag tgaccacaac ccgatattca tcaagctaaa ccatggtggc ctatatagcg
      241 aagacacagg cgttgatttg gcacttgatc tacagtctgt attaacaaca cccccacgcc
      301 tctcaacgat gcgcaccatg gggggatttt ttgagggttg gttttaggga ctttaagcct
      361 gaccgacagt gttagctgcc actagccgtc actacaacgc ccatgcccct tgcctgactc
      421 gcccacttcc actccacttc aacttcatcc tcacccaatc accggcgcca agctactcct
      481 taagtccttc tccgtgcggg cactgcgctc ttggtagtca cgcaactggt cttcaccaat
      541 taaccccaca ttgaagtact gcgactcggg gtgactgaag taaaaaccgc agacactggc
      601 ggccggatcc atcgcaaaac tctcagtgag ctccatgcca atatcgtctg cacgcagcac
      661 atcaaacatg tcgcgtttaa ccacatgctc cggacatgcc gggtaacccg gtgccgggcg
      721 aatgccaaca tacttttcag cgatcaactc atcgttagac aaggtctcat cactggcata
      781 tccccaaaga tcacgcctga cgcgcgcatg caaggcttcg gcaaacgcct cagccaaacg
      841 atcagccagc gacttgaaca tgatcgcact gtaatcgtct tgggccttat cgaattcttg
      901 ttcttttttc tgaataccga cacccgcggt tacggcaaac aacccgatgt aatccttcac
      961 acccgatgat ttgggtgcaa tgaaatccga caggcactta ttggtaacac cctcgcgttt
     1021 gacaccctgt tgacgcaagc cgcgccacgt aaacaacact tcttcacgac tatcgtcggt
     1081 atagacctcg atgtcgtcat cgttgaccgt gttggccgga taaaacgcca ccaccccatt
     1141 ggctgttaac caacgaccat cgaccatgcg tttgagcatg gcctggccat cggcaaacac
     1201 tttctgtgcc tgctcaccca ccacctcatc ttcaaggatc ttcggatacg aaccaaacaa
     1261 gctccatgtc tggaagaaag gcgtccagtc gatgtatttg gcaagctcgg ccaaatcaaa
     1321 gttcttgaac aaacgacgcc cgatgaactt gggtttcggt ggttggtagt tcgcccagtc
     1381 aaactgtggt ttgccagctc gggcgtcagc aagtgaaatc agcggtgttg cctgacgctg
     1441 cgcgtggcgt tggcgcacgg tttcgtactc ctcagccagg ttgtcaagat acgcttgcgc
     1501 gttgtctgac accaggttct gcgccacacc aaccgagcgg ctggcatccg gcacatagat
     1561 aaccggaccg tcgtaatgtg gggcaatctt gaccgccgtg tgaacccggc tagtcgtggc
     1621 gcccccgatg agtaacggcg tcttgcggct acggaaatac tcatcgcgct gcatctcggc
     1681 tgccacggtt gccatctctt ccaggctcgg cgtaatcagt ccagacagac cgatgatgtc
     1741 ggcgttttct tgtttggcgc actcaagtat cttggcagcc gggaccatca cgcccatgtt
     1801 gacgacttca aagttgttgc actgaagcac caccgtgacg atgtttttac cgatgtcgtg
     1861 cacatcgcct ttgacagtgg caatcacaat cttgcctttg gcacgcacat caccgccggc
     1921 atcagcaatc tgtcgcttct cttcttcaat gtaaggcaca aggtgcccaa ctgcttgctt
     1981 catgacacgc gcggacttca ccacctgagg caagaacatc ttgccttcac caaagaggtc
     2041 accgaccacg ttcatgccat ccatgagcgg gccttcaatg acttcaatcg gacgcccgcc
     2101 acgatcggca acttgctgtc gaatctcttc ggtgtcttcg gtgatgaagg ttgtgatgcc
     2161 gcgcaccaag gcatgcgtca accgatgctc aaccggctca gcgcgccagg ccagatcctc
     2221 ttccctttta gcgccagagc ccttgaccgt atcagcgaac gctaccagcc gctctgtgtt
     2281 ggtcctatcg tcagacgcct cagtcatgcc aacgggcgtt tgccgatcga gcaccacgtc
     2341 ttcaaccatg tcacgcaagg ctttatcaag ttcggcatac acaccgagct gtccggcatt
     2401 cacgatgccc atcgacagac cttccttgat ggcgtagtac aagaaaaccg tgtgaatcgc
     2461 ttcacgcatg ggctcattgc cccgaaacga gaagctgaca ttcgaaatac cacccgagat
     2521 acgggcatgt ggcaggttgg cacgaatcca acgcgtggct tcaataaagt ccaccgcata
     2581 gtgatcgtgg tcttcgatac cggttgcaat ggcaaacacg tttggatcga agatgatgtc
     2641 ttcgggtggg aaacccactt ctttaatcaa caggtcgtat gcgcgctggc agatttcttg
     2701 tcggcgtgcg agcgaatcgg cttggccctg ctcatcaaac gccatgacga tgaccgctgc
     2761 accataacga cggcaaagct tggcttgttc gagaaatggc gcttcgccct ctttcaggga
     2821 aatcgagttc accacgggct tgccctgcac acatttcaaa ccggcctcaa tgactgccca
     2881 cttggagctg tcaatcatca caggcacgcg cgagatgtca ggctcagacg ccactaagtt
     2941 caggaaccgg tgcatacatg cttgtgaatc aagcatggct tcatccatgt tgatatcgat
     3001 gatctgtgcg ccgttttcta cttgctggcg ggccactgca agcgcttcgt cgtaattctc
     3061 ttcacgaatc aagcgcgcaa acattttgct gccagttacg ttggtgcgtt cgcccacgtt
     3121 aatgaacaac gaatccccat caaaatttaa cgcttcaagc cctgacagac gcgtacggca
     3181 agcaatctca ggaacaacac gtggcgttaa gccagccact ttgctggtga tggcttcaat
     3241 gtgttctggc gtggtgccac agcagccacc ggccatgttg accaaaccag attgtgcgaa
     3301 ctcttctaac aagttcgaag tatcttccgg gctttcatca aacccggttt cactcatcgg
     3361 gttgggcaga ccggcgttgg ggtaaacaca gacgtaggtg tcgcagattt ttgcgagttc
     3421 ggcgacatag gggcgcatca acgccgcacc caaggcacag ttcagtccaa tggtcacagg
     3481 tctggcgtga cgcacggagt tccagaaggc ttcaaccgtc tgacccgaca gaatgcgacc
     3541 cgaggcgtcc gtcactgtgc cagagatcat taaaggcagg cgctcgccac gggcttcgaa
     3601 cacttcttca atggcaaata tcgccgcctt ggcgtttagc gtgtcaaaaa ttgtctcaag
     3661 caacagcaga tctacaccgc catcgagcag accattgacc tgttcggcat aagccacacg
     3721 caactcgtca aaggtcacgt tacgcgcacc cgggtcattg acgtctggcg aaatcgaagc
     3781 ggtcttgggt tgcggaccca aggctcctgc gacaaacctc ggatgatctt ccgttgagta
     3841 cgcatcgcgt gcctgacagg caagcttggc agactctaca ttcatctcgt aggcgagttc
     3901 tggcaagtca tagtcacttt gggccacagt cgtggcacca aaggtgttgg tttcgatgac
     3961 gtcagcacca gcagcgaaat actggtcatg gatttcacga atgatgtcag gccgcaaaag
     4021 cgacaagatt tcgttatttc ccttgagatc cttgccgtgc tcggcaaacc gctggccgcg
     4081 gaaatcggat tccgccaatt tgtagcgctg cagcatggtg cccatggcac catccaaaat
     4141 caaaatgcgc ttggccaaag cacgcacaaa tgcctggtct cgggtgtagg actcaatcgg
     4201 gtagggaaga tttgggtaag acatacctaa aaccgcgcga ttactcgctg gttactaaaa
     4261 aataactatt aatcgtaaca aattaagggt actcgcctat cagtagagat agatcaaagt
     4321 gtgggtatgc ctgcgtgata aagtttagag ccttcggtgc tttcgatgcg acaacgcgaa
     4381 tctaggcgaa ttgcagtcgt acggcgaaag ttaaacggga aacaggaagc ggtgattcgc
     4441 ccgccagcct gtgctgcccc cgcaacggtc agcgtctgac agacatgtca gctacgccag
     4501 cccgataccg gccgaagcag gtgggtcggc gcgccagaca agtgcgcttg acccgttgat
     4561 tgaccggtta tgcggggacg cgtgaccaca tcaagagaaa cttatgcact caaccctccc
     4621 caagcgcgcg gcggtggtcg tcgtatgcgc attcagtacc cctgcgttcg cgcaaattag
     4681 cagcacctcc cctatcgaac tagaccccat catggtgacg gctacccgca gccccgaacc
     4741 acttcagtcg accattggcg acaactcggt agtcaccaga gaaagccttg atcagacccc
     4801 acaggcgtca tttgcagaag ttttatcgcg ccagcacggc attacctaca tcgatcgggg
     4861 tggcccacag tctgtctcag ccattagctt gcgcggcacc aacagcaaac aaagcctcgt
     4921 gttaattgac ggcatgcggg tgaactctcc aaccaatggc ttgccagcca tcaacgccat
     4981 cccattaaac gccatcga
//
LOCUS       DATBNL010000541         1805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136162, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000541 DATBNL010000000
VERSION     DATBNL010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136162"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VIC30_09375"
     CDS             <1..404
                     /locus_tag="VIC30_09375"
                     /inference="COORDINATES: protein motif:HMM:NF017355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEY7804624.1"
                     /translation="LKGHILFIDELITYAAPTIPALQEAFVSTVDDYLAHCANAGKLP
                     QRPFKGQFNVRIAPELHQTAVLRAEAEGTSLNNIVVRALRTYLIEPAANANHHDLGDQ
                     TEAFAVRSDAPDASNATDTSQAQGAADSVAV"
     gene            842..1507
                     /locus_tag="VIC30_09380"
     CDS             842..1507
                     /locus_tag="VIC30_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003799125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEY7804625.1"
                     /translation="MPRLVLFDFDGTFADTAPDMAAAANRLRQQRGLDPMDVAQLRPF
                     VSMGARGMVRASLGLDTDHPEFEAAKAAFLADYEQNSTTHTVLFDGIDSLLQQIRDAD
                     MRWGIVTNKLTRYAEPIVAWLNLPDCATLVCGDTVEYAKPHPLPLQHAAREAGFETHH
                     CFYVGDDLRDIQAAKAAGMPSIAAAYGYCGVEHPVDSWQADSIVEHPSHIWDSIRTLN
                     QAT"
     gene            complement(1541..>1805)
                     /locus_tag="VIC30_09385"
     CDS             complement(1541..>1805)
                     /locus_tag="VIC30_09385"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015225 - biotin transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015878 - biotin transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEY7804626.1"
                     /translation="AKRSAQLAQGERSGAQIFAGNLTAAILGGALTVYAVGVPWLAVI
                     SNIPMSEAVLAVAIFMPGDVIKALIAAFVATRVAQLMPTAGDR"
BASE COUNT          416 a          509 c          485 g          395 t
ORIGIN      
        1 cactcaaagg acacattctg ttcattgatg agctcatcac ctacgccgcc ccaaccatcc
       61 cggcactgca agaggcattc gtgtccactg tggacgacta tttggcacac tgtgccaatg
      121 ctggcaaact gccgcaacgc ccctttaagg gtcagttcaa tgtgcgcatt gcaccagagt
      181 tgcaccaaac agcggtgcta cgcgccgagg ccgaaggcac gtcactgaat aacatcgtgg
      241 ttcgagcgtt aagaacctac ctcatcgaac cggcagccaa cgccaaccac cacgatctag
      301 gcgatcaaac tgaggccttc gccgtacggt cggatgcacc tgatgcatct aatgcaactg
      361 acacctcgca ggcacaaggc gcagccgact cggtagccgt ttagcgcgta aagccccgtt
      421 cttcaggacg gggttgtaag cgcgggcgca gcctataagt cagttttttg gtttttatgt
      481 tgtctcggtc agttgtatcc tcagtgtctt tgatacaatc gttggcagta ccaaagtaag
      541 ccgcagagcc tttaaattca gggctaattc caccacagcc accacagagt caagatttaa
      601 atgtgttgaa tgcggttaga cggaacacgc tgacttgggt ggtgcgttaa atgtactcgc
      661 ccgagggcat cgggtgatcg cctgtggagt tgaaacgttg gttttaacaa tgaagcagga
      721 accattggta agtagcgata cacgcccaat cttggcggct tgataaagcc gcgaggaatc
      781 ctcgtcgttc aggacgggaa ggacgtcaaa atcgaggctt ttcgattgca aaggggttca
      841 catgccgaga ctggtcttgt ttgattttga tggcacattt gccgacacgg caccggacat
      901 ggcggcagcg gcaaaccgac tgcgccagca gcgtggtctt gacccgatgg acgtggccca
      961 actgcgcccg tttgtttcta tgggagcgcg cggcatggtg cgtgcctctt tgggcctcga
     1021 tacagatcat cccgaattcg aggctgccaa ggctgcgttt ctagccgact acgaacaaaa
     1081 cagcaccacg catacggtgc tatttgacgg tatcgattcg ttgctgcaac agatccgaga
     1141 cgccgacatg cgttggggta ttgtgaccaa caaactgacg cgctatgccg aaccgattgt
     1201 tgcgtggctt aatttgcccg attgcgcaac actggtttgt ggcgatacgg ttgagtacgc
     1261 caagccgcat cccctgccct tgcagcatgc ggcccgcgag gctgggtttg aaacccacca
     1321 ctgcttttat gtcggtgatg atttacgtga cattcaagcc gccaaagccg ccggcatgcc
     1381 gtcaattgcg gccgcttacg gctactgtgg cgttgaacac ccggtagact cttggcaagc
     1441 cgacagtatc gttgagcacc ccagccatat ttgggactcg atacggacac taaaccaggc
     1501 cacttaagca ccaatagcgc atcccagcag caggatttga ttagcgatca cctgctgtcg
     1561 gcatcaattg agccacccgt gtcgccacaa aagcggcaat caaggccttg atgacatcac
     1621 cgggcatgaa tatggccaca gccagcacgg cttctgacat cggtatattg ctgatgacgg
     1681 ccaaccaagg cacacccacg gcataaaccg ttagcgcacc gcctaagatg gccgctgtca
     1741 ggttgcccgc aaatatctgg gcgccgctgc gctcaccttg tgccagttgc gctgagcgct
     1801 tggcc
//
LOCUS       DATBNL010000542         1921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_86520, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000542 DATBNL010000000
VERSION     DATBNL010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86520"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VIC30_09390"
     CDS             complement(<1..424)
                     /locus_tag="VIC30_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804627.1"
                     /translation="MFEDPRVIGLTRLMRGALCPPPGLGRKALALTVGLLCHALFGAA
                     VLAMIIAMFFGLSKSLGAVPWPFAILANIALIVQFPLVHSLLLTRRGGQLLTRCIPGK
                     HGSTLATTTYATIASAQLLILFVLWTPSGVVWWKAEDAV"
     gene            complement(417..1361)
                     /locus_tag="VIC30_09395"
     CDS             complement(417..1361)
                     /locus_tag="VIC30_09395"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7804628.1"
                     /translation="MSTTLVIGAGMTGIACARALHDAGRSVRVIDKGRGIGGRMATRR
                     LETRAGNLSFDHGAQYISVHTPAFAALLGELPKAEVWEDGATHAHYVGVPGMSSLPRA
                     LAAGLEVKNGVEVTSIQRKNGAWQVSVVDDVIEATRVVLTVPAPQIAPLLGSDHPLSR
                     IQDIVEMAPSLTLMAAFPTAGPAPFVSQIFPDGPISYIAQDNSKPGRHITAKAWVAQA
                     SILWSTEHLEQDKEKIAHLMLPLLCDMIGADPVTVLHLEAHRWRYARVITPLGQPFIR
                     DITGTLHIGGDWCLGPRVESAWESGTAIAQDILRGSNV"
     gene            complement(1501..>1921)
                     /locus_tag="VIC30_09400"
     CDS             complement(1501..>1921)
                     /locus_tag="VIC30_09400"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019430794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEY7804629.1"
                     /translation="HFQKQLKTVTDYKMPQATIELKDLILPTSIGTYGPSDTVPEAHV
                     LDMTLSIDPKLVLIANDGMSHVFDYDPLMAAIDRLSRDCHYETQEWLISRIASACAAH
                     TEITSIDVSLHKRPVRDGSGALGVRLKLNVKELAKLR"
BASE COUNT          422 a          501 c          562 g          436 t
ORIGIN      
        1 ataccgcatc ttccgctttc caccagacga cgcctgaagg tgtccagagc acaaacagta
       61 tcaacaattg tgcagaagcg attgtggcat aggtggtcgt ggcgagcgta cttccgtgct
      121 ttccaggaat acaacgtgtc agtagctgcc ctccgcgccg cgtcagcagt agcgaatgga
      181 cgagtggaaa ttgcacgatg agggcaatgt tggccaagat agcaaatggc cagggaactg
      241 cgccaaggct tttgctcaac ccgaagaaca tggcgatgat cattgccaat acagccgcac
      301 cgaagagcgc gtggcaaagt aagcccacgg tcagtgcgag tgctttgcgt cccaaaccgg
      361 gtggggggca aagcgcgcca cgcatcagcc ttgtgaggcc aatgacgcgt gggtcttcaa
      421 acattgctgc ctcgaagaat atcttgcgcg atagcggtcc cgctttccca cgcggattct
      481 acgcgcggcc cgaggcacca atcaccccct atatgcagcg tgccggtgat gtcgcggatg
      541 aagggttggc ctagtggtgt tatcacacgg gcatagcgcc aacggtgagc ttccaggtgt
      601 aaaactgtta cagggtcagc gccgatcata tcgcaaagga gtggaagcat aaggtgcgct
      661 attttttctt tgtcctgttc gaggtgttcg gtggaccaga gaatgctggc ctgtgcgacc
      721 caggccttag cagttatgtg gcggccaggc ttgctgttgt cttgcgcaat gtaggaaatg
      781 gggccgtctg gaaatatttg actgacgaat ggtgcggggc ccgcggtggg gaaagcagcc
      841 atgagggtta gactaggcgc catttctacg atgtcttgga tccggctgag cggatgatcg
      901 ctcccgagca gtggcgctat ctgaggagcc gggacggtca ggacaactcg cgtggcttcg
      961 atcacgtcgt ccaccacgct cacctgccaa gccccatttt ttcgctggat tgacgtaacc
     1021 tcgacgccat tttttacctc aaggcctgcg gccaaagcgc ggggtaagct cgacatgccc
     1081 ggtacaccga catagtgcgc atgcgtcgcg ccatcctccc aaacttcagc ttttggaagt
     1141 tcacccagaa gagctgcaaa ggctggtgtg tgaacggaga tatattgtgc gccgtggtca
     1201 aaggacaagt ttccggctcg ggtttcaagg cggcgtgtgg ccatacgacc gccaatccca
     1261 cgccctttgt cgattacgcg gacggatcgc ccggcgtcgt ggagtgcccg ggcgcaggca
     1321 atgccagtca tgccggcccc gataacgaga gttgtactca tgatggccca atcacatgcg
     1381 aaatgtggtg gattacctcg acgcggtgca tgctattctc ctcaatcatt gactgaagta
     1441 tcgcatcagt cggttaaggc aatgcggcga caattcaatt tcgccagcta tgattgagtg
     1501 tcagcgaagc ttcgcaagtt ctttgacgtt gagtttgaga cgcacgccca aagcgccgct
     1561 tccgtcacgc acggggcgtt tgtgcagact aacgtcgatg ctggtaattt ctgtatgcgc
     1621 ggcacatgcg ctggcaatcc tgctgatcaa ccattcctga gtttcgtagt gacagtcgcg
     1681 tgacaaacgg tcaattgcag ccataagtgg gtcgtagtca aaaacatgcg acatgccatc
     1741 attcgcgatc agaaccagtt tgggatcgat tgacaaggtc atgtcaagca catgtgcctc
     1801 cggtacggta tcacttggcc cgtaagtgcc gatgctggtc ggcaagatca ggtctttgag
     1861 ttcgatagtc gcttgaggca ttttgtaatc cgttacggtt tttagctgct tttgaaagtg
     1921 a
//
LOCUS       DATBNL010000543         2007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_26481, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000543 DATBNL010000000
VERSION     DATBNL010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26481"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1268)
                     /gene="pheT"
                     /locus_tag="VIC30_09405"
     CDS             complement(<1..1268)
                     /gene="pheT"
                     /locus_tag="VIC30_09405"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008159915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY7804630.1"
                     /translation="MQFPDSWLRTFVTAPVTTEELADQLTMAGLEVEEVTPAAPLFSG
                     IVVARIESIEPHPNADKLRVCQVNTGRETLQIVCGAPNARAGLVAPLAKVGAVLPGDF
                     KIGTAKMRGVESAGMLCSAKELGISQDHGGLMELSDAFELGTDVRQALTLDESILTLK
                     LTPNRADCLSILGVAREVAALNDQPLVDSPVPVVPVEIEDQVSVEIQDTDLCGRFAGR
                     VVRGVNARAVTPDWMVQRLERAGQRSVSVLVDISNYLMLERGRPTHVFDLDKMTAPGL
                     TVRWAKAGESLKLLNGDTVALTPEMGVITAGDRIESLAGIMGGDETAVNDDTQNVYLE
                     AAFWWPEAIAGRSRALKLTSEAAHRFERGVDFANITDDLERLTALVLEICGGKAGPVS
                     DQIVNLPARQEVQMRLSRCQKVLGIPVSAK"
     gene            complement(1287..>2007)
                     /gene="pheS"
                     /locus_tag="VIC30_09410"
     CDS             complement(1287..>2007)
                     /gene="pheS"
                     /locus_tag="VIC30_09410"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEY7804631.1"
                     /translation="FGRGAIHPVIRTWQRVEAIFGSIGFDVADGPEIENDWTNFTALN
                     NPLNHPARSMQDTFYVDMADSDGLPLLLRTHTSPMQVRYARMHKPPIKVIAPGRTYRV
                     DSDATHSPMFHQVEGLWIDENISFADLKGVYTDFMRQFFETDDLKIRFRPSFFPFTEP
                     SAEIDMMFTSGPNQGRWLEISGAGQVHPDVIRNFGLDPEQYIGFAFGSGLERLTMLRY
                     GVNDLRQFFEGDLRFLAQFAD"
BASE COUNT          498 a          569 c          505 g          435 t
ORIGIN      
        1 tgtttggcgc taacggggat acctaacacc ttctggcaac gcgacaagcg catttgaacc
       61 tcttggcgtg cgggcaaatt tacgatctga tcgctgaccg ggccggcttt gccgccacag
      121 atctcgagca ccaacgccgt caagcgttca aggtcgtcgg tgatgttggc gaaatctaca
      181 ccacgctcaa accggtgcgc cgcctcagac gttagtttga gtgcgcgact acgcccagca
      241 atcgcttcag gccaccaaaa ggccgcctca agatagacgt tttgtgtgtc gtcgttaact
      301 gccgtttcat cgccacccat gatgccagca aggctttcga tgcgatcgcc agcggtgata
      361 acacccattt ctggtgtcag ggcgactgta tcaccattga gtaacttcaa agactcacca
      421 gcttttgccc agcgcacggt caagcccggg gccgtcattt tgtctaaatc aaagacgtgc
      481 gttggtctgc cgcgctcaag catgaggtag ttcgaaatat ccaccagaac ggacacgctg
      541 cgttgaccgg cgcgctcaag acgctgcacc atccaatctg gtgtgacagc gcgcgcatta
      601 acaccacgca cgacacgacc agcaaaacgg ccacacaagt cagtgtcctg tatttcaaca
      661 ctaacttgat cttcgatttc aactggcaca acaggcaccg gtgagtccac caatggctga
      721 tcattcagag ccgcaacttc tcgtgctacc cccagaatgg agaggcaatc tgcgcggttc
      781 ggggtaagtt tcagggtcag aatcgattcg tcaagtgtca aggcttgacg cacatccgtg
      841 cccagttcaa acgcatctga cagttccatc aagccgccat ggtcttgcga aatgccaagc
      901 tctttagctg agcacaacat gccagcagat tcaacgccac gcatctttgc agtgccgatc
      961 ttgaagtctc ctggtaacac cgcgccgacc ttggccagtg gcgccaccag accagcacgg
     1021 gcattaggtg caccacacac aatctgtagc gtctcgcggc ccgtgttgac ttggcagact
     1081 ctgagcttgt cagcattggg gtgtggctcg atcgattcaa tccgagccac cacgatgcca
     1141 ctaaataaag gagcagccgg ggtcacctct tcgacttcaa gaccagccat ggtgagctgg
     1201 tcggccaact cctcagtagt gaccggtgcg gttacaaacg ttctaagcca ggaatctgga
     1261 aattgcatag tgggagactc tatcaatcaa tcggcaaact gtgccaggaa ccttaaatcg
     1321 ccttcaaaaa actgtcgcag gtcattaacg ccgtaacgca acatggtcag gcgctccaga
     1381 ccagatccaa acgcgaatcc aatgtactgt tcgggatcta agccgaaatt gcgtatgaca
     1441 tccgggtgta cttgaccagc accggatatt tcaagccagc gaccttggtt aggcccgctt
     1501 gtaaacatca tgtcaatctc agccgatggc tcagtgaagg gaaagaacga gggcctgaat
     1561 cggattttga ggtcatcggt ctcaaaaaat tgacgcataa agtccgtgta cacgcccttc
     1621 aagtcggcaa atgagatgtt ctcatcaatc cacaaacctt cgacttgatg aaacatgggc
     1681 gagtgcgtcg catcactgtc aacacgataa gtgcgaccag gtgcgatcac tttgatcggt
     1741 ggtttgtgca tccgcgcata ccgaacctgc atgggactgg tgtgcgtgcg tagcaacagt
     1801 ggcaaaccat cgctatcggc catgtcaacg taaaacgtat cttgcatgga acgcgccggg
     1861 tggttcagtg ggttgttcag tgccgtgaaa ttggtccaat cattctcaat ttcagggcca
     1921 tctgccacat caaagccgat agacccaaaa atggcttcga ctcgctgcca ggttcgaatc
     1981 accgggtgaa tcgcaccacg cccaaaa
//
LOCUS       DATBNL010000544         2983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_86553, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000544 DATBNL010000000
VERSION     DATBNL010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86553"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VIC30_09415"
     CDS             <1..241
                     /locus_tag="VIC30_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804632.1"
                     /translation="GAIGAGAAPIECLSQAIDHLPSDGLLCVSLNDHTLEDPRYEALI
                     ADAVAAGTIEVLESEHGEHLPEINLGARVYVIRKR"
     gene            complement(254..1405)
                     /gene="glpQ"
                     /locus_tag="VIC30_09420"
     CDS             complement(254..1405)
                     /gene="glpQ"
                     /locus_tag="VIC30_09420"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: protein motif:HMM:NF008354.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEY7804633.1"
                     /translation="MTQLQSVLAPTLWRDCRMSPSLRGLAALALSVSVWLGAPSVALA
                     ATSTGQTQVQTAQPVVIAHRGASGYLPEHTLAAKVLAHAMGADYLEQDLVMTGDGELV
                     VLHDLYLDRVSDVAQKFPGRARDDGRYYVIDFTLDELRSLEITERRKNDDASDATLAF
                     EGRFGLNQSRFGVNTFGEELELIKELNRLTGKDVGIYPEIKSPAFHHQNGQDIAAATL
                     EVLKDHGYTTPQSKVYLQSFDPNELKRVRTELMPAMEMEVPLVQLIARTNWQLTQEQT
                     ADGQWVNYDYDWMLEPEAMKALAEYADGVGPHIGMLVTSDGDEWVVNKLVSSAQAQGL
                     AVHPYTVRADRLPRGIANLDQLHELLFDTASVDGVFTDFPDKAVQYLNR"
     gene            1593..2120
                     /locus_tag="VIC30_09425"
     CDS             1593..2120
                     /locus_tag="VIC30_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804634.1"
                     /translation="MNDSTSPISFRTAVMLFASLGLTACSAVSGNPTPEPINAFPKPT
                     HWQAMSTTAMSITGDITLSNNRLTFSNQDFLAIEPVDRNAEDGQTLFRVTSKTNPELL
                     NGNLICGNQPIDYLLVQVSDGVTTGEVAGQSDMQLKAYYYPEQLRLANLPLKDKDSLT
                     HMMCALYTYVSAPTK"
     gene            2306..>2983
                     /locus_tag="VIC30_09430"
     CDS             2306..>2983
                     /locus_tag="VIC30_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004265443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY7804635.1"
                     /translation="MALTPAPATAQFEALAAYEKALIALFERSRDSVVFISTSRTVRD
                     AWTRNLTTIPRGSGSGFLWDNNGHVVTNFHVIQGASQAMVTLADSRQYKARLVGASPA
                     HDLAVLRIDTDFKRPTPVPLGTSDNLQVGQHVFAIGNPFGLDWTLTTGVISALNRSLP
                     NENGTRIVEDLIQTDAAINPGNSGGPLIDSSGRLIGINTAIYSPSGASAGIGFAVPVD
                     TVARVVPQ"
BASE COUNT          687 a          863 c          754 g          679 t
ORIGIN      
        1 gggcgccatt ggtgcgggag ctgcacccat cgaatgcttg tcgcaggcca ttgatcacct
       61 gccttctgac ggtctgctgt gtgtatcact aaacgatcac acgctagaag accctcggta
      121 tgaagcactg attgccgatg cagtggccgc tggcaccatc gaagtgcttg agagtgagca
      181 tggcgaacac ttaccagaga tcaacttagg tgcgcgcgtt tatgtgattc gcaagcggtg
      241 atcctcaagc ccattagcgg ttcaaatatt gcaccgcctt gtccggaaaa tccgtgaaca
      301 cgccatctac actggccgtg tcaaacaaca actcgtgcag ttgatctagg tttgctatac
      361 cgcgtggcaa gcgatcagcg cgcacagtat aggggtgtac cgcgagcccc tgagcttgtg
      421 cgctgctcac gagcttatta acaacccact cgtcaccatc gcttgtcacc agcataccga
      481 tgtgtggtcc cacgccatcg gcgtactcgg ctagtgcctt catcgcttca ggttccaaca
      541 tccagtcata atcataattg acccactgac catcggccgt ttgttcttgc gttagttgcc
      601 aattggtgcg agcaatcagt tgcaccaagg gaacttccat ttccatggcc ggcatgagtt
      661 cggttctgac gcgtttaagt tcattagggt caaatgattg caggtagacc ttgctttgag
      721 gtgtggtgta gccatggtct ttaagtacct caagcgtggc cgcagcaatg tcttggccgt
      781 tttggtgatg aaacgccggg gatttgattt cagggtagat acccacgtct ttgccggtta
      841 ggcggttaag ctccttgatc agctctagtt cttcaccaaa cgtgttcacc ccgaaccgcg
      901 attgattcaa gccaaatcga ccttcgaatg ccaatgtcgc atctgacgca tcatcgtttt
      961 tgcggcgctc ggtaatctcc aatgaccgca actcatcgag cgtgaaatca atgacgtaat
     1021 aacgcccatc gtcacgcgcg cgcccaggga acttctgtgc cacatccgag acccggtcca
     1081 gataaagatc gtgcaacacg acgagttcac catcgcccgt catgaccaag tcttgctcga
     1141 ggtaatcggc gcccatggca tgtgccagca ccttggccgc aagtgtgtgc tcgggtaaat
     1201 agccactggc gccacgatgg gcgatgacaa cgggttgcgc cgtctgcact tgtgtttggc
     1261 ccgttgatgt cgcggccaac gctactgaag gcgcaccaag ccacacactg accgacagcg
     1321 cgagcgcagc caacccccgt aaactcggac tcattcggca gtcacgccac agtgttggcg
     1381 ctaaaacaga ttgcagttgt gtcattggat taacctatcc ttcaaaagga gctgacgtag
     1441 ggtttgatgt catcacataa aagataccgt gtggcaacgt ctacctgaca cgttcacctg
     1501 acacgttcac ctgacatacg gtgatgcttg cactacactt tttagcaaag gtttggtcat
     1561 aatgccaaca cagcaaaaca gaggtcaacg caatgaatga ttcaactagc ccgatttctt
     1621 tcagaaccgc tgtcatgctg tttgccagtc tggggctgac ggcctgcagc gccgtgtcgg
     1681 gcaatcccac gccagagccc atcaacgcat ttcccaaacc cacccactgg caggccatga
     1741 gcaccaccgc catgagcatc acaggtgaca ttacgttgag caacaatcga ttaacgttta
     1801 gcaaccaaga tttcttggcg attgaaccgg ttgatcgcaa cgccgaggat gggcaaacgt
     1861 tgtttcgagt cacctcaaaa accaatcccg aattactcaa tggcaatctg atctgtggca
     1921 accaacccat tgactacctg ctggtgcaag tatcggacgg ggtcacaacg ggagaagtcg
     1981 ccggacaaag tgacatgcaa ctaaaagcct actattaccc ggagcaactt cgcttggcta
     2041 acctaccgct taaagacaag gacagtctga cgcacatgat gtgcgcgctg tatacctatg
     2101 tcagtgcgcc aaccaagtaa gaccagccaa gcaagccaat tgatacccac caacgacaac
     2161 cgacctagct ccatgactca gacacgcgat gcgacctaac ctacccgctt ttctgtattg
     2221 cgccttttgg tattcggcct ttcggtcttt aggtctccga ccttcattac gacgcctgct
     2281 cgcgggtttg gcgctttgcc tacctgtggc actgacacct gcgccggcga ctgcccagtt
     2341 tgaggcgctg gccgcctatg aaaaagcgct cattgcgctg ttcgaacgtt cacgggattc
     2401 ggttgtgttc atcagtacga gtcgcaccgt gcgcgatgcc tggacgcgca acctgaccac
     2461 catcccgaga ggctcaggct ctgggttttt gtgggacaac aacgggcatg tggtcaccaa
     2521 cttccatgtc atccagggcg catcacaagc catggttact ttggctgaca gccggcaata
     2581 caaggcccgc ctggtgggtg cgagtcccgc gcatgattta gctgtattaa gaatcgacac
     2641 cgatttcaag cgccctaccc cagtgccgct cggtaccagt gacaacctgc aagtgggcca
     2701 acatgtattt gccatcggca acccgtttgg actggattgg acactgacta ccggggtgat
     2761 ctcggcactg aaccggtcgt tgcccaatga aaatggcaca cgcatcgtgg aagacttgat
     2821 tcaaaccgac gctgccatca accccggcaa ttcaggtggc ccgttgatcg actccagtgg
     2881 tcgactcatc ggtatcaaca ccgccattta cagtccatcg ggtgcctctg ccggcatcgg
     2941 gtttgccgtg ccagtcgaca ccgttgcccg ggtggtgccg caa
//
LOCUS       DATBNL010000545         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_195537, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000545 DATBNL010000000
VERSION     DATBNL010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195537"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /gene="thyA"
                     /locus_tag="VIC30_09435"
     CDS             complement(<1..299)
                     /gene="thyA"
                     /locus_tag="VIC30_09435"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEY7804636.1"
                     /translation="MRHVFENGVDKSDRTGTGTRSVFGHQMRFDLSEGFPLITTKKLH
                     TRSIFVELLWFLRGDSTVNWLRDRKVTIWDEWAPDNGDLGPIYGVQWRSWPAPDG"
     gene            complement(317..766)
                     /locus_tag="VIC30_09440"
     CDS             complement(317..766)
                     /locus_tag="VIC30_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY7804637.1"
                     /translation="MQCKVQWGGPDGMLFIGKTGTGHIAAMDGAPDGGGHNLAPRPME
                     MVLLGTGGCTAYDVVLILKRGRHAVTGCDVALTAERADTDPKVFTKIHFAFTVTGQDL
                     SQAVVERAVKLSHEKYCSASAMLASSAEMTWSVDLVDQAAADNGDNA"
     gene            990..>1532
                     /gene="coq7"
                     /locus_tag="VIC30_09445"
     CDS             990..>1532
                     /gene="coq7"
                     /locus_tag="VIC30_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone
                     monooxygenase"
                     /protein_id="HEY7804638.1"
                     /translation="MTTLNRRAMRRREGLLDNLIGEASVALQVLSGVSVASRPNPAGK
                     PSVDEPESLKPDQQRHSAGLMRINHVGEVCAQALYRGQAVAVEREQTKAILREAAREE
                     VDHLVWCQQRLKELNSRVSLLNPVWYAGSFALGVIASRAGERYNLGFMAETERQVEAH
                     LNGHLKTLPPDDQRSRQIITQ"
BASE COUNT          348 a          397 c          427 g          360 t
ORIGIN      
        1 tgtccatcgg gggctggcca cgagcgccat tgcacgccat agatcgggcc gaggtcgccg
       61 ttgtcagggg cccactcatc ccagatggtg accttgcgat cacgcagcca attgacagtg
      121 gagtcacccc gcaaaaacca cagcagctca acaaaaatgc tgcgggtgtg cagtttttta
      181 gtggtgatca gtggaaagcc ttcagacaag tcaaaccgca tctggtgtcc gaacacagag
      241 cgagtgcctg taccggtgcg gtcagactta tccacgccgt tttcaaacac atggcgcatg
      301 aagttttcat attggttcac gcgttatctc cgttgtctgc agctgcctga tcgactagat
      361 caactgacca tgtcatctca gcgctgcttg cgagcatcgc cgaggctgaa cagtattttt
      421 catgtgatag tttcacagca cgttcgacca ccgcttgcga cagatcttgt ccggtgacgg
      481 tgaaggcgaa gtggattttg gtgaagactt tggggtccgt gtctgcccgt tcggcagtca
      541 atgccacgtc acaaccagtg actgcgtgtc gtccccgctt gagaataagc accacgtcat
      601 aggcggtgca gcccccggtg cctagtaaaa ccatctccat ggggcgtggt gctagattat
      661 gtccgccacc gtctggtgcg ccatccatgg cggcaatgtg gccggtgcca gtcttgccga
      721 taaacagcat gccatcgggg ccaccccatt gcactttgca ttgcatgttt gattttcctt
      781 aatacgctgt catttagatc aatgatagcc ttccttaaag gcgctgtctc agtagtatct
      841 ttgcgcatat cagttaacgc aacgcataaa atagaactat caaagttcgc tggggcaggg
      901 tcagatcagc caggtttgga tgagataaaa accagcagca tcgttgctgc tggtttttag
      961 ggctaaacgc gaatgccaag gaaaagacaa tgacgacatt aaatcgccgt gccatgcgcc
     1021 gccgtgaagg tttgttggat aacttgatag gagaagcttc tgttgccttg caggtgttgt
     1081 ccggtgtttc tgtggcttct aggccaaacc cggccggcaa gccttcggta gatgagccag
     1141 agtctttaaa gccggatcag cagcggcact cggctggact gatgcgaatc aaccacgtcg
     1201 gtgaggtctg tgcacaggcg ctgtatcgcg gacaagcggt tgcggtcgaa cgtgagcaga
     1261 ccaaggcaat tttgcgtgag gctgcgcgcg aagaagtgga tcacttggtg tggtgtcagc
     1321 aacgcttaaa agagctcaac agtcgcgtta gtttgctcaa cccagtttgg tatgcagggt
     1381 cgtttgcctt gggcgtgatc gcgagtcggg caggcgaacg ctacaaccta ggtttcatgg
     1441 ctgagaccga gcgccaggtt gaggcgcacc tcaatgggca tctcaagaca ctcccacctg
     1501 atgatcagcg ttcacgacaa atcattaccc aa
//
LOCUS       DATBNL010000546         1954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_184700, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000546 DATBNL010000000
VERSION     DATBNL010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184700"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VIC30_09450"
     CDS             <1..296
                     /locus_tag="VIC30_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011515111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY7804639.1"
                     /translation="ERAAAMAPKFEAAIHDLKGEPFVKDIRNLGLVGGVELESREGQP
                     GTRAYDAFLECFKNGVMVRFTGDILAFSPPLIIEESHIDQIFSTVRKALHAVH"
     gene            complement(426..1763)
                     /locus_tag="VIC30_09455"
     CDS             complement(426..1763)
                     /locus_tag="VIC30_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013390989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804640.1"
                     /translation="MADGLPAPSRYWAALTILLGIGICVLDAAIINVALPTIAASLQV
                     EASTVIWVVNAYGLTVVVTLLPFASMAERIGFKRVFAGGLTVFALGALASALAPNIEL
                     LILARMTQGLGAAAIMCLFGGLMRHVYPSRLLARGIALNAMSVAVNAVIGPTIGSTIL
                     SVADWRWMFVSLLPLVLVTAALMRHLPSIPTIENRFDVRAALLSASAIGLFIVGLDYL
                     ASYPLHAAASMAVSVLLGFWMVRRSAGQTRPLVPVDLFRIAALRSALAASVSSFAAQM
                     ATFVSLPFYLQTVYGHDLLTVGWLMASWPLGAAIMALVAGRLTDKVPVSVMCAIGAGA
                     MALATLLIVAMPTTVPTPWLMAMMLLGGLGFGFFQTPNNRALLTSAPRERAGAVGGLQ
                     AVTRVFGQTTGAALVASAFAASQSHGATLGLLVGSVFATLALLVNIRRFLQDR"
     gene            complement(1783..>1954)
                     /gene="glmU"
                     /locus_tag="VIC30_09460"
     CDS             complement(1783..>1954)
                     /gene="glmU"
                     /locus_tag="VIC30_09460"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008641833.1"
                     /note="forms a homotrimer; catalyzes the acetylation of
                     glucosamine-1-phosphate and uridylation of
                     N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc;
                     function in cell wall synthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEY7804641.1"
                     /translation="SDTQLVAPVKVGKGATLAAGTTLTKDAPPHKLTMSRSSQKTLEN
                     WQRPVKPPPKKP"
BASE COUNT          479 a          552 c          564 g          359 t
ORIGIN      
        1 ttgaacgtgc cgcggccatg gcacccaaat ttgaagcagc catccatgac ttgaaaggcg
       61 agccgtttgt taaagacatc cgcaacctgg gcttggtcgg cggtgtcgag ctcgagtcac
      121 gtgaaggaca gccgggcacg cgcgcatatg acgccttcct tgagtgcttt aagaatggtg
      181 tcatggtgcg gtttactggc gacatcctgg cgttctcgcc accgttgatt atcgaagagt
      241 cgcacatcga ccagattttc tcgacggtga gaaaggcact gcacgctgtg cattaatcca
      301 gcactgccgg gcaagttttg ttgaaccagc cttgctaaac aagcgccaat gatagcgata
      361 aaaagcccag cttaagctgg gctttttatc gacttgtgac aagcaagtaa tggtgatctg
      421 cagcttcacc tgtcttgcaa gaaacggcgg atattgacca acaacgccag cgttgcaaac
      481 acactgccaa cgagcaaacc tagcgtagcg ccatggcttt ggctggctgc gaacgccgac
      541 gcgaccaagg ctgcgccagt ggtttgccca aacacgcgag tcacggcttg taagccacca
      601 accgcacctg cgcgttcgcg cggggcactc gtgagcaaag cacgattgtt cggtgtctgg
      661 aaaaaaccga atcccaagcc gcctagcaac atcatggcca tgagccaagg cgtgggcaca
      721 gttgtcggca tggccacaat cagcaacgta gccaacgcca tggcacccgc accgatggcg
      781 cacatgacgg acaccggcac tttgtcagtc aagcgtccgg ccactagcgc catgatggca
      841 gcaccgagcg gccagctcgc catgagccag ccaacggtca ataggtcatg accgtatacc
      901 gtttgtaaat aaaacggcag tgaaacaaag gttgccattt gtgcggcgaa cgaactgacc
      961 gaggctgcta acgctgagcg cagcgcggca atgcgaaaca gatcgactgg gaccaatggt
     1021 cgagtctggc cagccgatcg tctgaccatc cagaacccca acaagacgct gaccgccatg
     1081 ctggcggcag cgtgaagcgg ataggatgcc aaataatcga gcccgacaat gaacagcccg
     1141 atggcgctgg cactgagcaa ggcggctctc acatcaaatc ggttctcaat cgtgggtatg
     1201 cttggtaaat gtcgcatcaa tgcagcggtc accagcacca aaggcagcaa tgagacgaac
     1261 atccagcgcc agtcagcgac tgacaagatg gttgaaccga tggttggacc aatcacggca
     1321 ttgacggcca cgctcatggc atttaacgcg atgccgcgcg cgagcagtcg ggacggatag
     1381 acatggcgca tcaacccgcc aaacaggcac atgatggcgg ctgcgcctag gccctgtgtc
     1441 atgcgtgcca agatgagcag ttcgatgttt ggcgccaaag cactcgcgag tgcaccgaga
     1501 gcaaacacag ttaagccacc cgcaaaaacc cgtttgaagc cgatccgctc tgccatgctg
     1561 gcaaatggca acaaagtcac cacaaccgtc agaccgtagg cgttgaccac ccaaatgaca
     1621 gtcgacgcct cgacctgcag tgaagcggca atggtcggca aagccacgtt gattatggcg
     1681 gcatcgagta cgcagatgcc gatgccaagc aggattgtca gtgccgccca atagcggctc
     1741 ggcgcaggca ggccatcagc catggcagtg cccgtggggg tgtcagggtt ttttgggagg
     1801 gggtttgacg gggcgctgcc agttttcaag ggttttctgc gaagatcgag acatggtcag
     1861 cttatggggt ggcgcatctt tggtcaacgt cgtgccggca gccaaggtag cacccttgcc
     1921 caccttgacc ggtgcgacaa gctgtgtatc tgag
//
LOCUS       DATBNL010000547         1712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_126163, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000547 DATBNL010000000
VERSION     DATBNL010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126163"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1482
                     /locus_tag="VIC30_09465"
     CDS             175..1482
                     /locus_tag="VIC30_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804642.1"
                     /translation="MAILRWHFLGWLCHPTASIYTVHMEDKEVKPAKPTKTTVTWAFR
                     SRFRRNAYGWKGSKLAISRIKEALSEIRVVERHDPVVAAEGAVLLLTILSPALSDIDS
                     SSGALGSAVNGAIETLVPIIAQAPVDRTQRQKWLTKLYEAYQDDDIPYIEYLGEFWGE
                     LCADPELASTWADEFLPTVKHVIAERAAGTYAFFKGTTPCLSALFHANRHDELLQLLD
                     SQPRPYFGDVKWGAKVMITRGQIDEGLAYWRKLGGNYIHETEFAQFAEEALLAAGRRA
                     EAFDQYALLANRANSNISTFRAIHKKYPEIQANKLLSYLIAAGGSPGKWFATAKTLGQ
                     FEVAQQLIWQSPCDPHTLIRAARDFETKQPLFALQCARGALHWISTGHGYEITGLDVH
                     KAWQLAVSISEATNQTGETAAFIDRTVESAQWMKPFMGKAAGK"
BASE COUNT          388 a          446 c          456 g          422 t
ORIGIN      
        1 ctgttccttt ttatgacaaa aacgctactg gtttggtcag ttcagctcgg tcagttcagc
       61 ttgacttcgg ggcatgaaca gacttatgtt gccttgtatc cgcagctagc ttctaaggct
      121 actaccttta tcacctgagt acgcagcaca atcttcagag ttggagagcc ctgggtggca
      181 attctcaggt ggcacttctt aggttggctg tgtcacccca ctgcatcgat ttacactgtg
      241 catatggaag acaaagaagt caaacccgcc aaacccacca aaacgacagt cacctgggct
      301 ttcaggtcac gctttcggcg caatgcctat ggctggaaag gctccaaact tgctatcagc
      361 cgaatcaagg aagccttgtc tgagatccgt gtggttgagc gccatgatcc ggtcgtggct
      421 gccgagggcg ctgtgttgtt gctcacgatc ctgtcaccgg cgctaagcga cattgacagt
      481 tcttccggtg cgttgggtag tgctgttaat ggcgctatcg aaaccttggt gcccatcatt
      541 gctcaagcgc cagtagacag aactcaacga caaaagtggc tgaccaagct gtacgaggca
      601 taccaagacg acgacatacc gtatatcgaa tacctcggtg agttctgggg tgaattgtgc
      661 gctgatcctg aattggcctc gacatgggct gacgagttct tgcccacagt caaacacgtg
      721 attgctgaac gtgccgctgg cacttatgct ttttttaaag gcaccacgcc ttgcttaagc
      781 gctttgtttc atgccaaccg tcatgatgag ttgctgcaat tgcttgatag tcagccacgt
      841 ccttacttcg gtgatgtgaa gtggggtgcc aaagtcatga tcacccgtgg gcagatcgat
      901 gagggtctgg cgtactggcg caagctaggc ggcaactaca ttcatgaaac cgagttcgcc
      961 caatttgccg aagaggcatt gctcgctgcc ggtaggcgcg ccgaggcatt tgatcagtat
     1021 gcgctgttag ccaaccgggc caattcaaat atatcgacgt ttcgcgctat acacaaaaag
     1081 tatcccgaga ttcaagcaaa caaactgctg tcctacctga ttgctgcagg cggatcacct
     1141 ggcaaatggt ttgctacagc taagacatta ggtcagtttg aggtggcgca gcaactgatc
     1201 tggcagtcac cgtgcgaccc gcatacgttg attcgggcgg cccgtgactt tgaaaccaaa
     1261 cagcctttgt ttgctctgca atgtgcacgg ggtgcgttgc attggatctc gaccggtcac
     1321 ggctatgaaa tcacgggtct tgatgtccac aaggcttggc agttagcggt atcgatttcc
     1381 gaggctacca accaaacggg tgaaaccgcg gccttcattg accgcaccgt tgaatccgcg
     1441 cagtggatga aaccttttat gggcaaggct gctggtaaat agttaggcga tctagcccaa
     1501 cgatagcccc gcacttgttg cgcagaactt gttgcccctg tacgccagca cctaccgatc
     1561 aagcagtgca gctaaatgtt ggcgtttttg cgccctgaga tgccgcagtc tagtcagcac
     1621 gacagccatt gcggcaggtc tatgagtgag taccgtggct ggccactgcc aacttgcgtt
     1681 cgggtcacgt caatttgcac cggttgatgc aa
//
LOCUS       DATBNL010000548         2136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136226, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000548 DATBNL010000000
VERSION     DATBNL010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136226"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VIC30_09470"
     CDS             <1..237
                     /locus_tag="VIC30_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY7804643.1"
                     /translation="VEANVVPTMGAEDFAFMLQEVPGCYVWIGNGLGEHRDAGHGLGP
                     CMLHNGSYEFNDELLPLGGTYWVKIVERWFEKQV"
     gene            256..1731
                     /gene="mgtE"
                     /locus_tag="VIC30_09475"
     CDS             256..1731
                     /gene="mgtE"
                     /locus_tag="VIC30_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY7804644.1"
                     /translation="MATHDTDQTNDVHLPRRLDPEDAQLALTRVQEQLRRHAVVEHLV
                     HKQEEGQQSAPIVENLLQRQHETELRGLVNSLHPADIAFILESLPKDDRQMIWQLVRA
                     EFDADVLIEVADWVRQSLIETMDRADLVAATENMDADEIADLIANLPPDVVAEVQKGL
                     TPKERAQLIEAMGYPEDSVGGIMDFDMLRVRDDVTLKVVLRYLRRLDELPDHTDQIFV
                     VDRTDQLLGTLPLSALLLNRPSENVRDVMSTDYLSLDPMDEDAEAAQAFERYDLVSAP
                     VVDRRGRLIGRVSIADVVDVIREDSEEQELSRAGMQEEDIFEPVSRAIRNRAPWLLLN
                     LCTAGIAAFVASRFEDTVSHIVVLAFLMSIVAGLGGNSGNQTMTLIIRALAVGRVTAQ
                     NAWQLIKRELAVTMLVASIGSFVAGGFAWWISDSIPVALVMMAAMIGNMLVGAMVGVL
                     VPMIRSRLGKDPAMGSSVLLTFATDSLGFLIFLGLATIFLM"
     gene            complement(1694..>2136)
                     /locus_tag="VIC30_09480"
     CDS             complement(1694..>2136)
                     /locus_tag="VIC30_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014427001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY7804645.1"
                     /translation="VQSLLGTIVLAIAGIPYAGFLGAVMLMLCVAQIGPSPVLVPVVI
                     WMFWQGDSMGWSIFLAVAGGLVIMLDNFLRPYLIRRGADLPLLLILLGVIGGMLTFGL
                     IGIFVGPVVLAVTYTLMMAWVEQAKAAEVQQRTTLGISSRDPEK"
BASE COUNT          478 a          584 c          615 g          459 t
ORIGIN      
        1 gttgaggcca atgtggtacc caccatgggc gcagaggatt tcgccttcat gttgcaagag
       61 gtgcccggtt gttacgtctg gattggcaac ggcctaggtg aacaccgcga cgccggacac
      121 ggcctcgggc cctgcatgct gcacaacggc tcttacgaat ttaacgacga actgctgccg
      181 cttggtggca cctactgggt caagattgtc gagcgctggt ttgagaagca agtctgactg
      241 aaccgggatg cacctatggc aacgcacgac actgaccaga caaacgacgt tcacctgcca
      301 cgccggcttg atcccgagga cgcgcagtta gcactcacgc gggtgcaaga acagttgcgc
      361 cgccatgcgg ttgtcgagca cctggtgcac aagcaagagg aaggccagca aagcgccccc
      421 atcgttgaga acctgctgca acgccaacac gagaccgaac tgcgtggttt ggtcaactca
      481 ttgcacccag ctgacattgc cttcatcctg gagtcgttgc ccaaagacga tcgccagatg
      541 atctggcaac tggtgcgcgc cgagtttgat gccgacgtgc ttattgaagt ggccgattgg
      601 gttcggcaat cgctcatcga aaccatggat cgtgccgatc tggtggcagc caccgagaac
      661 atggatgccg atgagattgc cgatctgatc gccaatctgc cacccgatgt ggtggcagaa
      721 gtacaaaaag gcctgacccc gaaagagcgc gcccaattga ttgaagccat gggctacccc
      781 gaggacagcg tgggcggcat catggacttt gacatgttgc gtgtgcgaga cgacgtgacc
      841 ttgaaagtcg ttttacgata tttgcgccgc ttagatgagc tacctgacca cacggaccaa
      901 atatttgtgg tggaccgcac cgatcagctg ctaggaacct tgcctttgtc agcgctgtta
      961 ctgaatcgac ccagcgaaaa cgtgcgcgac gtcatgagta ctgactactt gtcgttagac
     1021 ccgatggatg aggatgcaga ggccgcacaa gcgtttgaac gctatgacct ggtgtccgcg
     1081 cctgtggtcg accggcgcgg acggctcatc ggccgcgtga gcattgccga tgtggtggat
     1141 gtgatccgcg aagactccga agaacaagaa ctctcgcgtg caggtatgca ggaagaggat
     1201 atttttgagc cggtgtcgcg cgccatccgc aaccgggcac cttggctttt gctgaactta
     1261 tgcaccgctg gtattgccgc gttcgtggcg tcgcgttttg aggatacggt tagtcacatc
     1321 gtggtactgg cgtttctgat gtcgattgtg gctggcttgg gtggcaactc gggtaaccag
     1381 accatgacct taatcattcg ggcactggcg gtcggtcgtg tcaccgcaca aaacgcctgg
     1441 caactgatca agcgggaatt ggcagtcaca atgttggttg catcaatcgg cagttttgtg
     1501 gcgggtggct ttgcctggtg gatttcggac tcgataccgg tggcgctggt gatgatggca
     1561 gccatgattg gcaacatgct ggttggcgcc atggtggggg tgttagtccc tatgatccgt
     1621 tcacgtctgg gcaaggaccc cgccatgggg tcttcggtgc ttttgacgtt tgcgacggat
     1681 tccttgggtt ttcttatttt tctgggtctc gcgacgatat tcctaatgta gtgcgctgtt
     1741 gcacttcggc tgccttggcc tgctctaccc aagccatcat cagtgtatag gtaaccgcga
     1801 gcaccaccgg cccaacaaaa ataccaatga gtccgaatgt gagcatgccg ccgatcacac
     1861 cgagcaggat cagcaacagc ggtaaatcag caccacggcg aatcaaatag ggccgtaaaa
     1921 agttgtccaa catgatcacc aaaccacctg cgacagccag aaaaattgac caccccatac
     1981 tgtcgccttg ccagaacatc cagatcacga ctggcacaag taccggtgac ggtcctatct
     2041 gggccacgca caacatcaac atgactgcac ccaaaaaccc ggcataaggg atgccagcga
     2101 tggccaagac gatcgtccct agcagactct gcacta
//
LOCUS       DATBNL010000549         1512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_146372, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000549 DATBNL010000000
VERSION     DATBNL010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146372"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..1192)
                     /locus_tag="VIC30_09485"
     CDS             complement(119..1192)
                     /locus_tag="VIC30_09485"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4236 domain-containing protein"
                     /protein_id="HEY7804646.1"
                     /translation="MPFRFFQRFRIAPGLRLNVSKGGISLSAGPRGAQFTIGTSGTRA
                     TAGLPGTGLHYTVHNPHKKLMGQSSGRTSNGTRGNQTANEPPQPKLPNLSWLERLTTD
                     SDSKDFIDGWQAWGRGEVDTAMRKFRAVSANSKQGTDAAWVAAVLHAQRDEYAQAIGL
                     LQRALKRPDELGQACQAHDFTPKVQVSVTPEVDAMMVPTAASARLFLAELQQSNGDSE
                     AALATLAQALADQPEGQDIDPVMLAAFGELATDAGDADAIHRFNVLAADIGNDTRVHT
                     AVMFYRAKALFDQRLFDAALSVLTPALRRKKDRDPELLRDIRFLRGKTYEALNRSAQA
                     RRDFERVYAEDPEYDGIRQALGL"
     gene            complement(1288..>1512)
                     /locus_tag="VIC30_09490"
     CDS             complement(1288..>1512)
                     /locus_tag="VIC30_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008903585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804647.1"
                     /translation="SQARPQKESSRPHNAPTRPTRDDFRVGDRVSFEDRYLRTRIGTI
                     IRINQKTATLDCGDSQWRVSFGVLRPVIDL"
BASE COUNT          339 a          432 c          396 g          345 t
ORIGIN      
        1 aaatgcttag ctcaggctgc taaggtgaac gaaatgaatc ccagcacccc tattcatcaa
       61 ctgataagac gattgatgga tctcggacaa acggtgccaa ttcgataagg tgtccgcact
      121 acaaccccag cgcctgccta atcccgtcgt actcgggatc ttcagcatac acccgctcaa
      181 aatctcggcg cgcctgagca cttctgttta acgcctcgta ggtcttaccc cttaaaaacc
      241 gaatatcacg cagcagctca ggatctcggt cttttttgcg tctgagcgcc ggggtcagta
      301 ctgacaaggc tgcatcgaac aaccgctgat caaacaaagc ctttgcacgg tagaacatca
      361 cagctgtgtg tacccgagtg tcgttgccta tatctgcggc caacacattg aaccgatgta
      421 tcgcatcggc gtcaccagca tctgtggcta gttcaccgaa ggcagccagc atcaccgggt
      481 caatgtcttg tccttcaggt tgatccgcaa gcgcctgcgc cagcgtcgcg agtgccgctt
      541 ctgaatcacc gtttgattgc tgcaactcag ccaagaacaa gcgggcacta gcggccgtgg
      601 gcaccatcat cgcatccact tccggtgtaa ctgacacttg caccttgggg gtgaagtcat
      661 gcgcctggca agcttggccg agctcatcgg gacgtttcaa agcccgttgc agcaatccga
      721 tggcctgcgc atattcgtct cgctgagcat gcaacacagc agccacccag gcggcatcag
      781 tgccctgctt tgagttagca gacaccgccc gaaacttcct catggcggta tctacctcgc
      841 ctcgccccca ggcttgccag ccatcaatga aatctttgct gtcgctatca gttgttaagc
      901 gttcaagcca actcaagttt ggcagtttgg gctgcggtgg ctcgtttgct gtttgattgc
      961 ctctcgtacc gtttgatgta cggcctgaag actgccccat gagtttcttg tggggattgt
     1021 gcacggtgta atgcaacccc gtccccggca agcccgccgt ggcgcgggtg ccgctcgtac
     1081 cgatggtgaa ctgtgcgcca cgcgggccgg cagataagga aatcccaccc ttgctgacat
     1141 tgagtcgcag accgggggcg atacggaaac gttgaaagaa tcgaaaaggc atgcattaag
     1201 cataactttg atcggggttc agttgcaacg gtggttggat cgagtggtta gatcgagact
     1261 ggacaaccac cggacaaacc tcgctatcta caaatcaatt acaggacgca ggacaccaaa
     1321 tgacacgcgc cactgcgaat ctccacaatc gagtgtggcg gttttttggt tgatgcgaat
     1381 gatcgttccg atgcgcgtgc gcaaatagcg atcttcaaaa ctaacccgat cccccacccg
     1441 gaaatcgtca cgcgtgggtc tggtgggtgc attgtgaggc ctagacgact ctttttgtgg
     1501 tctggcttgt ga
//
LOCUS       DATBNL010000550         1706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96266, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000550 DATBNL010000000
VERSION     DATBNL010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96266"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VIC30_09495"
     CDS             complement(<1..785)
                     /locus_tag="VIC30_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HEY7804648.1"
                     /translation="MALVSMRQLLDHAAENGYGIPAFNVNNLEQVQAIMEAAQETDSP
                     VIMQASAGARKYAGEGFLKYLIQAAVESYPHIPVVMHQDHGQSPKVCQGAIDLGFSSV
                     MMDGSLMEDGKTIADYDYNVKVTKEVVDMAHKLGVTVEGELGCLGSLETMKGDKEDGH
                     GAEGTMTMEQLLTDPEQAADFVRQTQLDALAIAIGTSHGAYKFTRKPTGDILSINRIK
                     EIHTRLPNTHLVMHGSSSVPQELLAEIREFGGDMKETYGVPVE"
     gene            1031..>1706
                     /locus_tag="VIC30_09500"
     CDS             1031..>1706
                     /locus_tag="VIC30_09500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY7804649.1"
                     /translation="MDNLCDANIDRATPAAIKYADLTSQSAHGWSRPKRLETGTDGLR
                     ADQAARLVSQGVGIVWEGDFFEGRSLLQAVKRRLSTKTSSQTQATEALPWPDRFHRIR
                     LQRAQSARQLGLLLVHIGPDFTLNYRRAPDAKEALAMAYGERLANTDFLMPLTELMGV
                     LSAYEWHRKGLPVTPLGASIYPRWGVFAPTRHEYLDLVMQADLPESCQSAVDVGTGTG
                     VLALLLA"
BASE COUNT          378 a          484 c          439 g          405 t
ORIGIN      
        1 tcttcaacgg gcacgccata cgtttctttc atatcgccac cgaactcacg gatttccgcg
       61 agcaactcct gcggcacact tgagctgcca tgcatcacaa ggtgtgtgtt gggcaagcgg
      121 gtatgaatct ctttgatccg gttaatcgac agaatgtcac cggtaggttt gcgcgtgaac
      181 ttgtacgcac cgtggctggt accaattgca atggctagcg catcgagctg ggtctgacgc
      241 acgaagtcgg cagcctgctc tggatccgtt aataactgct ccatggtcat cgtgccttca
      301 gcgccatgac catcttcttt gtcgcctttc atggtctcaa gtgagcccaa gcacccgagt
      361 tcgccttcaa cagtcacacc aagcttgtga gccatgtcga ccacttcttt agtgactttg
      421 acgttgtagt catagtcggc aatggtttta ccgtcttcca taagcgagcc atccatcatc
      481 acgctggaga atcccagatc gatcgcaccc tgacagacct tgggcgattg accatgatct
      541 tggtgcatca ccacgggaat atgcggatac gattcaacgg cggcctgaat caaatacttc
      601 agaaatccct caccggcata tttacgcgca ccggcagaag cctgcatgat gaccggactg
      661 tcggtctctt gtgcggcctc catgatggcc tgaacctgct ctaggttatt gacgttaaaa
      721 gccgggatgc cgtagccgtt ttctgccgcg tgatccagaa gctggcgcat agagacgaga
      781 gccataatat aagtccttgc agtagattaa aaatcgaatt catttgcaca gcccaaccta
      841 aagggctggc tttgcttttg tcctgtactt ttgacctttg ttcttgacat aagcgcatcc
      901 agcgacaggc gatcaagcct atcgctggtg cctgccagtg gcgcttaaca gtggcgcgcg
      961 tcaatggcat tgccccgcat aatccttaaa ctgtcgttat tttacccata accgtaggtc
     1021 agactgcacc atggacaacc tttgcgatgc aaacatcgat agggcaacgc ccgcagcgat
     1081 taaatatgcc gacctgacat cgcaaagcgc gcatggctgg tctcgcccca agcgccttga
     1141 aacaggcacc gatggcctgc gcgctgatca agctgctcgc ttagttagcc aaggcgtggg
     1201 tattgtctgg gagggtgatt tttttgaagg acgttcgctg ctgcaagccg tcaaacgccg
     1261 cttaagcact aaaacgagct cgcagactca ggcaaccgaa gcattgccct ggccggatcg
     1321 atttcatcgt atccgtctgc aacgcgcgca atccgcccgc caactggggc tgctgctcgt
     1381 gcacatcggc ccagacttca cactgaatta ccgacgtgcg cccgatgcca aagaggcatt
     1441 ggcaatggct tacggcgaac ggctagcaaa cacagacttt ttgatgcccc taaccgagct
     1501 gatgggtgta ctgagcgctt acgaatggca tcgcaaaggg ttgccggtga cacccttagg
     1561 cgcatccatt tatccgcgct ggggcgtgtt tgcacctaca cgccacgaat acctcgacct
     1621 agtgatgcaa gctgacttgc ccgaatcctg tcagtcggcc gttgacgtgg gtacgggcac
     1681 cggggtgttg gctctgttat tggcca
//
LOCUS       DATBNL010000551         2867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_184774, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000551 DATBNL010000000
VERSION     DATBNL010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184774"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VIC30_09505"
     CDS             <1..433
                     /locus_tag="VIC30_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804650.1"
                     /translation="IGHLLSRDLPIVAANYSTRRMPVKPTAMVDDGNGSVGRVYTAPD
                     SEGLQPVDYLGMGVMMVKREVFEKLEQPWFAIPYSTKGGHYIGEDCFFCTKAREAGFE
                     VMVDHDLSHHVKHIGTFEYSHEGAWAMKEQLESGTDLIQRA"
     gene            405..1037
                     /locus_tag="VIC30_09510"
     CDS             405..1037
                     /locus_tag="VIC30_09510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804651.1"
                     /translation="MALTSYNELKTSIADWLNRDDLTSVIPDFISLAEAQLERRLPVE
                     RMVKRANATIDTPFSAVPSDFVSPKSLVLTSTAPIQPLEFLSEDELDAKKYVYRTTGK
                     PLYFTVVGTQFEVLPAPDTEYTAELTYVATLAKLSVSNTTNWILQRHPDVYLYGSLMQ
                     AAPYLRDDDRVQMWGPIYLQAIEDMLVQDSRAAVSQGRVSMKVKPTRVIP"
     gene            1034..1417
                     /locus_tag="VIC30_09515"
     CDS             1034..1417
                     /locus_tag="VIC30_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804652.1"
                     /translation="MSAFSDYLENKVLLHVFGASAYSAPGTLYLALYTSDPGDDNSGT
                     ECSGTSYARHTITFSVVADTASNNAAVEFPTAGSNWGTITHVGILDALTSGNLLAHGA
                     LTASKVVNSGDVFRVPSGDLDITLA"
     gene            1421..1966
                     /locus_tag="VIC30_09520"
     CDS             1421..1966
                     /locus_tag="VIC30_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804653.1"
                     /translation="MAGYGSGLYGYGNYGIDPKEGQAALSAAATMTVVGSRLVFGSCS
                     MAAAASMTVSGERIALGASALSAAATQTTDAERIHQSGSAMSAAATQVTSGLRIHQSG
                     SILLAEGSTLVAGQQIDIGAAHLFATAVLVCNGRRKWEAEADTAETWTNVPDTDETWT
                     PISDTSETWTTKTFPAYLEAA"
     gene            1978..2658
                     /locus_tag="VIC30_09525"
     CDS             1978..2658
                     /locus_tag="VIC30_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804654.1"
                     /translation="MADTTTTNLSLTKPEVGASADTWGGKINTNLDIVDGIFADAGTG
                     TSVGLQVGAGKTLKVTGTCDLDTAVVINDSGGDKDTRIEGDTDANLVFVDASADYVGI
                     GKNDPSSKLDVNGVIKDSSGNVRAIPQSGSAKTTSYTLATSDIGEFIEVGSGGSITIP
                     DTTFSAGDAVSVFNNTTGDITITCTITTAYIAGTDADKASVTLATRGVATILFLSGTV
                     CVITGNVS"
     gene            2658..>2867
                     /locus_tag="VIC30_09530"
     CDS             2658..>2867
                     /locus_tag="VIC30_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804655.1"
                     /translation="MSGIMMLLLGARVAAGFTEYKIFTASGSWVCPAGVTEVEYLVVA
                     GGGGGGSLAGGGGGAGGFRAGTGLSV"
BASE COUNT          618 a          734 c          870 g          645 t
ORIGIN      
        1 tatcgggcac cttttgtccc gtgacttgcc gattgtcgcc gcgaactatt ccacgcgacg
       61 catgccggtc aagcccaccg caatggtgga cgacggcaac ggcagcgtag gaagggtgta
      121 cacggcaccg gatagcgagg gcttgcagcc cgtcgattat ctcgggatgg gcgtgatgat
      181 ggtgaagcgc gaggtatttg agaagctaga gcagccgtgg ttcgccatac cgtactcaac
      241 gaagggcggc cactacatag gtgaggattg cttcttttgc accaaggcgc gcgaggcggg
      301 gtttgaggtg atggtggatc acgatttgag ccaccacgtc aaacacatcg gcaccttcga
      361 gtattcgcac gagggtgctt gggcgatgaa ggagcagtta gagagtggca ctgacctcat
      421 acaacgagct taaaacaagc atcgctgact ggcttaaccg tgatgacctc acgtcagtta
      481 ttccagattt tatctcttta gccgaggcac agcttgagcg gcggctgccg gttgagcgga
      541 tggtcaagcg cgctaatgcg acgattgaca cgccattctc tgcggtgccg tctgactttg
      601 tgtcgcccaa gtctttggtg ctgacatcga ccgcacccat ccagccgctt gagtttctgt
      661 cagaggatga gctagacgca aaaaaatacg tctaccgcac caccggcaag cctctgtatt
      721 tcacggtggt cggcacccag tttgaggtgc tgcctgcgcc tgacaccgag tacacggcag
      781 agctgaccta tgtggcgacg cttgccaagc tgtcggtcag taacaccacc aactggattt
      841 tacagcgtca ccctgacgtt tatctgtatg gctcgctgat gcaggccgct ccttacttgc
      901 gcgacgatga tcgtgtgcag atgtgggggc cgatttattt gcaagccatt gaggatatgt
      961 tggtgcaaga ttcacgcgct gcggtgagcc aaggccgcgt gtcaatgaaa gtcaaaccga
     1021 cgagggttat accgtgagtg cattttctga ttatcttgaa aacaaggtgc tgctgcatgt
     1081 ctttggcgca tcggcctata gcgcaccggg tacactatat ctagccctgt acacatctga
     1141 tcctggggac gacaactcag gaaccgagtg cagcggcaca tcgtatgcca gacataccat
     1201 taccttttcg gtggtcgctg ataccgcaag caataacgcg gcagttgagt ttccaaccgc
     1261 cggaagcaac tgggggacaa tcacgcacgt tggtattttg gatgcgttga cctctggcaa
     1321 tttgttggcg catggcgcgt tgaccgcttc aaaggtagtc aactcgggtg acgtgtttag
     1381 agtgccgtct ggcgatcttg acatcacttt ggcgtaagac atggccggct acggctctgg
     1441 tctttatggg tatggtaact atggcataga cccgaaagag ggtcaggctg ccttgagtgc
     1501 tgccgccacc atgacggtgg ttggcagccg attagtgttt ggaagttgct cgatggctgc
     1561 ggccgcgagc atgacggtat ctggtgaacg gatcgctcta ggcgcatcgg cgttgtcggc
     1621 agcggcaact cagaccaccg acgcagagcg catccaccaa agcggctctg caatgagcgc
     1681 ggcggcaacg caggtcacaa gtggcctgcg gattcaccaa agcggctcca tcttgttggc
     1741 cgaggggtca acactggtcg cgggccagca gattgatatt ggtgcggcgc acttgtttgc
     1801 gacggcagta ttggtctgca acggcaggcg caagtgggag gcggaggccg atacggcaga
     1861 gacgtggaca aatgtgccgg atacagatga gacgtggaca ccgattagcg acacgtctga
     1921 gacttggaca accaaaactt tcccagccta tcttgaggct gcttgaggtg atgagacatg
     1981 gctgacacaa ccaccaccaa tctttcattg accaaaccag aggtcggcgc gtctgctgac
     2041 acttggggcg gcaagatcaa caccaacctc gacatcgttg acggcatctt tgccgatgct
     2101 ggcacgggta catcggtagg cttgcaagtc ggcgctggca agacgctcaa ggtgacggga
     2161 acgtgcgacc tggacacggc ggtggtcatc aatgactcag gtggcgataa ggacacccgc
     2221 atcgagggtg acaccgacgc aaaccttgtt tttgtggatg cgtcagcgga ttacgttggc
     2281 ataggcaaga atgaccctag ctccaagctc gacgttaatg gcgttattaa ggattcgtct
     2341 ggcaacgtgc gggctatccc acaatcaggg tcagctaaga caaccagcta tacacttgcc
     2401 acgagcgata tcggtgaatt tattgaagtg gggtcaggtg gttctatcac catccccgac
     2461 acgacttttt ctgctggcga tgcggtgtca gtgttcaaca acacgactgg cgatatcacg
     2521 atcacttgca cgatcaccac ggcgtacatc gctggcacgg atgctgacaa ggcatcggtg
     2581 acgttagcaa cccgtggcgt ggcgaccatt ttgtttttat ctggcaccgt ttgcgtgatt
     2641 acaggaaacg ttagctgatg agcggcatta tgatgctcct gctcggcgca cgggtcgcag
     2701 caggtttcac tgaatataaa atcttcaccg catcgggcag ttgggtttgt ccggctggcg
     2761 tgacggaggt cgagtacctt gtcgttgcgg gtggtggggg tggtggatct cttgccggtg
     2821 gcggcggtgg cgctggcgga ttccgtgctg gtacaggatt gtccgtt
//
LOCUS       DATBNL010000552         2261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136291, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000552 DATBNL010000000
VERSION     DATBNL010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136291"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VIC30_09535"
     CDS             <1..533
                     /locus_tag="VIC30_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HEY7804656.1"
                     /translation="IEWGRSHLGYRLDQASILMGVTAFGTIFGAVYASRVPLPKALGV
                     LPMGIVMGLVVLLMPLVSDKWEVYSLLLVIGGLSGYFVVPMNALLQHRGHVLLSAGHS
                     IAVQNFNEQLNILLMLGMYALMLWLDLPINIIIVIFGLIVAALMAVIMRWSRRNLKEN
                     PELLGEIGRHGHGTAL"
     gene            770..1750
                     /locus_tag="VIC30_09540"
     CDS             770..1750
                     /locus_tag="VIC30_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009516251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY7804657.1"
                     /translation="MKLLATASALALGAAIGMTAVPTAQAQQPTFITIGTGGVTGVYY
                     PTGGAICRMMARTRGEHGIRCGAESTGGSVFNVNAVRNGELEFGVAQSDVQFNAYNGE
                     DKFKEQGANPNLRSVFSIHPEPFTVVARADSGIKNFEDLKGKRVNVGNPGSGQRATME
                     VLMEQMGWTMDDFSLVSELQANEQSQALCDNNIDAMIYTVGHPNGSIKEATTACDSVL
                     VTVDNDAVEQLVADKPFYRVATIPGGMYRGSDNDTQTFGVGATLVTSADVPDEVVYVL
                     TKSVFENMDQFRSLHPAFANLDPKQMASDGLSAPLHPGAEKYYREAGLLN"
     gene            1876..>2261
                     /locus_tag="VIC30_09545"
     CDS             1876..>2261
                     /locus_tag="VIC30_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HEY7804658.1"
                     /translation="MTTPDTTAHRQFDEDELQELVASTDSGARAPQNRNIALFMAAIA
                     FFWSVFQLWIAQPQMWFAEYLPVLNAAQTRPVHLGFAMLLAFLAYPALKSSPRNRIPL
                     TDWVLAIVGSGTAFYVFFFYRELVDT"
BASE COUNT          487 a          635 c          590 g          549 t
ORIGIN      
        1 tcattgaatg gggtcgcagc cacttgggct accggctcga tcaagcttca atcctgatgg
       61 gggtgaccgc gtttggcaca atcttcgggg cggtgtatgc cagtcgcgtg ccgctaccca
      121 aggcacttgg cgtactaccc atgggcatcg tcatgggcct agtggtacta ctcatgccgc
      181 tggtttctga caaatgggaa gtctatagtc tgttactggt tattggcggc ttgtcaggtt
      241 acttcgttgt accgatgaac gccttattac aacaccgcgg tcatgtgctg ctgtcggccg
      301 gtcattcgat tgccgttcag aactttaacg agcaactcaa catcttgctc atgttgggca
      361 tgtatgccct tatgctttgg ctagatttac ccatcaacat catcattgtg atttttgggt
      421 tgattgtcgc agcgctcatg gcggtcatca tgcgctggag ccggcgcaac ctaaaagaga
      481 accccgaact acttggagag atcgggcgtc acgggcacgg caccgcactc tgacagccca
      541 aaattgacct cgatcatttc tgggcgtttt ttgttgcgct gcaaggtcga gtcagttgat
      601 gggacatttt gatgcatctt gaattcagcc ctatacttgt cagcataaag acaggtttgg
      661 ggctttgggg ctatctgagt atatttgcgc tggttcaaac tggcgtaccc ccgtgacctc
      721 tccaagactt tgtcttttgt ccaacgattc ctatctcagg agaaacaaaa tgaaactact
      781 ggcaactgct agcgcattgg ccctcggtgc tgccatcggc atgaccgctg tgcccacagc
      841 gcaagctcag caacccacct tcatcaccat tggtacaggc ggcgtcacag gcgtctatta
      901 ccccacgggc ggtgcgattt gccgcatgat ggcccgcaca cgcggcgagc acggcatccg
      961 ttgtggtgct gagtcaaccg gtggttcagt gtttaacgtg aacgccgttc gcaatggtga
     1021 acttgagttt ggtgtagccc agtcagacgt tcagttcaac gcttacaacg gcgaggacaa
     1081 attcaaggag caaggcgcta accccaatct gcgttctgtt ttctcaattc accccgagcc
     1141 cttcaccgtg gtcgcacgcg cggactctgg catcaagaac tttgaagacc tcaaaggcaa
     1201 gcgcgtgaac gtcggcaacc ccggttctgg ccagcgcgcc accatggaag tcttgatgga
     1261 gcaaatgggc tggaccatgg atgacttctc actggtttct gagctacaag ccaacgagca
     1321 atcacaagca ctgtgcgaca acaacattga tgccatgatc tacaccgtgg gtcaccccaa
     1381 cggttcaatc aaggaagcca ccacggcctg cgattccgtg ctggtgaccg tggacaacga
     1441 cgccgttgag cagctcgtgg ctgacaagcc tttctatcgc gtggccacca tccctggcgg
     1501 catgtatcgc ggcagtgaca acgacaccca gacgtttggt gttggtgcca ccttggttac
     1561 tagcgctgac gtgccagatg aggtcgttta tgtgttgacc aagtcggtgt ttgagaacat
     1621 ggatcagttc cgttcactgc acccggcatt tgccaatctc gaccccaagc aaatggcctc
     1681 agacggtttg tctgccccat tgcacccggg tgccgagaag tattaccgtg aagctggtct
     1741 gttgaactaa gacctagata agcgctcggc tgctcaaagg cagccgagcg ctaaccctct
     1801 gggcgacagt agtatgattc gcggtcttac agtagcgcaa cataaaccgc aacaccaacc
     1861 gccccactcg ctaagatgac aacgcctgac accacggctc atcgccaatt cgacgaagac
     1921 gaactccaag aactcgtcgc aagcaccgat agcggcgcac gcgccccgca aaaccgcaac
     1981 atcgcactgt tcatggctgc cattgctttt ttctggtcgg tctttcagct ttggatcgcg
     2041 cagccacaga tgtggtttgc tgagtatctg ccggttttaa acgcagcgca aacccgcccg
     2101 gtgcatttag gctttgctat gttgctggcc tttttggcct acccagcact gaagtcatcg
     2161 ccacgcaacc gaattccgct taccgattgg gtattggcca tcgtcggctc tggcacagcg
     2221 ttttatgtat ttttctttta tcgcgagttg gtcgataccg a
//
LOCUS       DATBNL010000553         2508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_56388, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000553 DATBNL010000000
VERSION     DATBNL010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56388"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VIC30_09550"
     CDS             complement(<1..629)
                     /locus_tag="VIC30_09550"
                     /inference="COORDINATES: protein motif:HMM:NF016827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEY7804659.1"
                     /translation="MTLTPALQQSIRLLQLSSLDLQSEIERALDENPMLEADNVSNDG
                     ADITPVVQNVDAQATPAQQSERYSGSRQSRDDDQQERPESSSLPTLREHLLAQLGTTR
                     ASDRDSALVGLLIDDLNDDGFLESSLQSIHDMLDPELAVEIDELSAALSLLQSFDPPG
                     IGARDLAECLNLQLKHPDLACIPALDDPQIQTIAQQICTEYLEVLAAGN"
     gene            667..1242
                     /locus_tag="VIC30_09555"
     CDS             667..1242
                     /locus_tag="VIC30_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804660.1"
                     /translation="MRKILPMHPEESSLTTKTDVQRINALLRRLCLPRWLWRTSVLVI
                     ALLAWIWVGKQILIGGSLVNYSGLQSLGAQVVDFLTRINPYIWWGLTIILSLIVLSLA
                     RSWLKASIKSGRQVSVSVGDIQKLAQGMTTEGVDVLLWAWDHEAGPVSVGDLIAARDQ
                     LRAGRVRKLATARAQHQVLRQIRDGSPPTAQ"
     gene            1634..>2508
                     /locus_tag="VIC30_09560"
     CDS             1634..>2508
                     /locus_tag="VIC30_09560"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEY7804661.1"
                     /translation="MLANPATKYIPFKPFERDYAERTWPSKRIMHPPIWMSTDLRDGN
                     QSLIEPMSVDRKLEFFEMLIRIGLKEIEVGFPSASQTDFDFVRKLVDENRIPDDVTII
                     ALTQARPELIERTVESAAGAKKAMIHLYNACAPAFRKIVFQLDKAQTRQVAVDGTKAV
                     MAAMAKHPQTDWYYQYSPEVFSTTEPEFALEVCNAVTQTWNPSPEKKIVFNLPATIEA
                     TTPNMYADQIEFMHRNLDRRDSIVLSSHPHNDRGTAVAAAELGLMAGADRIEGCLFGN
                     GERTGNVDLVTLALNL"
BASE COUNT          577 a          671 c          666 g          594 t
ORIGIN      
        1 taattaccgg cagccaacac ctcaaggtac tcggtgcaaa tttgttgggc gatcgtttgt
       61 atctgcgggt catctaaagc agggatacat gctaggtctg gatgcttgag ctgcaggttc
      121 aggcattcag cgaggtcgcg cgctccgata ccgggcggat caaaagactg taataagctt
      181 aacgcagccg ataactcatc tatctccacg gcaagttcgg gatcaagcat gtcatggatg
      241 ctttgtaatg aggactcaag aaagccatcg tcatttaagt cgtcgatcag taaacccacc
      301 agggcactgt cgcgatcgct ggctcgcgtg gtgccaagtt gggcaagtag atgttcgcgc
      361 aacgtaggca gactgctaga ctcgggtcgc tcttgctggt cgtcatcgcg gctttgcctt
      421 gaaccactgt agcgttcact ttgctgggca ggggttgctt gtgcatcaac gttttgaacg
      481 acgggcgtga tgtcggcccc atcgttactt acattgtcag cctcaagcat ggggttctca
      541 tcgagcgcac gctcgatttc cgactgcaaa tcgaggctcg agagctgcag cagccggatg
      601 gattgctgca gcgcaggcgt caaagtcaaa tgttgaccca accgaaggtc taaagatggc
      661 ctaaccatgc gtaaaatact gcctatgcat cctgaagaat cttccttaac cactaaaacc
      721 gatgtccagc gcatcaatgc gctgttgcgt cgactttgtt tgccgcgctg gctttggcgc
      781 accagcgtct tggtgattgc tttgcttgcc tggatctggg ttggcaagca aatactgatc
      841 ggtgggtctt tggtcaacta cagcggcttg caatcactag gggcgcaggt tgttgacttc
      901 ctgactcgaa tcaaccccta catttggtgg ggactgacga tcatcttatc gcttattgta
      961 ctttcgctag cgcgaagctg gcttaaagca agtataaaaa gtggccggca agtcagtgtg
     1021 tcagtgggtg acattcagaa gctagcccaa ggcatgacaa ccgaaggtgt ggatgtcttg
     1081 ttatgggctt gggatcatga ggctggtcca gtgtcggtgg gtgatttgat cgccgcgcga
     1141 gatcaattgc gagccggccg tgtgcgtaag cttgccactg cgcgggcaca acatcaggtt
     1201 ttacgccaga ttcgagatgg atcgccaccg acggcgcaat aaagccggaa acgttgcgcg
     1261 taagccgcat ttagagccac gtatcctagt ggcctgccgt tttaagctct atccaaccac
     1321 tgaacagttg caatcatccg ctttttgtgt ttattcttta ttatgagcat gaagtccatt
     1381 cacgacagtc gcacaaaagc tgcagcgccc gctcgcagct ccgtggtcgt gtctattgac
     1441 aggacacagc tcggtgaatc ctcaccccgt ctactatccc tcctactacc gatcggttgc
     1501 cgggcctagc gccccgtggc agtccggcaa ccgttagcca cacttgcacg acgcgatccc
     1561 tgtcgcatgc gtgaacccat cgttgacttg aataaaacac taacctgcca ggcaggcccc
     1621 aagaggtaac aaaatgctcg caaacccagc caccaaatac attccgttca agccgtttga
     1681 acgtgactat gcagaacgca cttggcctag caagcgcatc atgcaccccc ccatctggat
     1741 gagtaccgat ttacgtgacg gtaatcagtc tctgattgag cccatgagcg ttgatcgtaa
     1801 gttggaattt tttgagatgc tgattcgtat cggactcaag gaaatcgagg tcggattccc
     1861 gtcagcctct cagacggact tcgattttgt gcgcaagctc gtcgatgaga accgtattcc
     1921 tgatgatgtc accatcatcg ccttgacgca ggcgcgccct gagttgattg aacgcactgt
     1981 cgagtccgct gcaggcgcaa aaaaggccat gattcatctc tacaacgctt gcgcgccagc
     2041 cttcagaaaa atcgtcttcc aactcgacaa ggcgcaaacc cgccaggtag cggtcgatgg
     2101 caccaaggct gtgatggccg cgatggccaa gcacccccag accgactggt attaccagta
     2161 ttcacccgag gtatttagca ccacggaacc agagtttgcg cttgaggtgt gcaatgcagt
     2221 cacgcagact tggaacccat cgcctgagaa aaaaattgtc tttaatttgc cggcaaccat
     2281 tgaggccacg acgcccaaca tgtatgccga tcaaattgaa ttcatgcata gaaatctcga
     2341 ccgacgcgac agcatcgtct tgagttcgca cccccacaac gaccgcggca ctgccgttgc
     2401 ggctgctgag cttggcttga tggctggtgc cgaccgcatt gaagggtgct tgtttggtaa
     2461 cggtgagcgc acaggtaacg tggatttggt gacgctggcg ttaaacct
//
LOCUS       DATBNL010000554         1660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_126245, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000554 DATBNL010000000
VERSION     DATBNL010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126245"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..986
                     /gene="alr"
                     /locus_tag="VIC30_09565"
     CDS             <1..986
                     /gene="alr"
                     /locus_tag="VIC30_09565"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY7804662.1"
                     /translation="ENAISGLQSADGIALLDLEEAARARTAGWEKPILLLEGPFEAAD
                     LRAVRELGLTPVIHHEGQLDMIDEIGLGSFDVFLKMDTGMTRLGFTASNYEAAFARVE
                     QLRRAGKIGNVTYMTHFASADLTDGLDEPLREFVSMVGGRDGDWCFSNSAACLKHAKR
                     VGALAQLHGHSLWSRPGICLYGGSPLRDQTASELNLRPAMTLRSELISVKDVEVGQGV
                     GYGHTFVADKPMRVGVVACGYADGYPRHAPTDTPIAVNGHMTRLIGRVSMDMITVDLS
                     GVPDTDAVVGTEVVLWGQNGPSADAVAQAAGTISYELLSGVTARVPRELVP"
     gene            complement(992..>1660)
                     /locus_tag="VIC30_09570"
     CDS             complement(992..>1660)
                     /locus_tag="VIC30_09570"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804663.1"
                     /translation="FKLKTLARTGFKAGPTILLPVIILGGIFTGLFTVTESAAIALVY
                     GLFLTSVVYRELDRAKLFEFMRAAMISIGSIMLLIAAAKVFGWILTIEQVPQNLTAFL
                     LEHMNSKPLFAISIIAVALLTGCFLTPATALIVLTPILHPIAMAMGFDLLHFGILLLT
                     ALALGHITPPVGLTLFIASGLSNTPIDKLVKPLMPYLLVLLVTVLLVAFVPALTLTLP
                     SLLK"
BASE COUNT          390 a          407 c          492 g          371 t
ORIGIN      
        1 tagaaaatgc catttccggc ttgcagtcgg ccgatggcat tgcattgcta gatctcgagg
       61 aagcggcgcg cgcgcgcacg gccggttggg aaaaacccat cctattgcta gaagggccgt
      121 ttgaggctgc tgaccttcgc gccgtgcgtg agcttgggct gacaccggtg attcaccatg
      181 agggtcaact cgatatgatc gatgagattg ggctcgggtc atttgacgtt ttcctaaaaa
      241 tggacacggg catgacccgt ctcggtttca ccgcgtcgaa ttatgaggcc gcctttgcac
      301 gtgttgagca attgcgtcga gcaggcaaaa taggcaatgt cacttatatg acacacttcg
      361 ctagtgctga tctgaccgat gggctagatg agccattgcg agagtttgtc agtatggtcg
      421 gtgggcgcga tggtgattgg tgctttagta actcagcggc ttgtttgaag cacgccaagc
      481 gcgttggtgc cttggctcaa ctacacgggc attctttgtg gtcacggcca ggtatctgct
      541 tgtatggcgg cagccccttg cgcgatcaaa cggcgagcga attgaactta cgtccagcga
      601 tgacccttcg ctctgagctc attagcgtca aagatgtaga agtcggtcaa ggtgtgggct
      661 acgggcacac gtttgtggcc gataaaccca tgcgagtcgg tgtggtggcg tgcggttatg
      721 ccgatggtta cccgcgccat gcgcctaccg atacaccaat agccgtcaac ggtcatatga
      781 cgcgtttgat cggtcgggta tccatggaca tgatcacagt ggacttatcg ggcgtaccgg
      841 atactgacgc cgtggtgggc acggaagtgg tgctttgggg acaaaacggc ccaagcgccg
      901 atgccgtggc gcaggctgct ggcacgatca gctacgagtt gttaagtggt gtgacagcgc
      961 gcgtgccccg cgaactggtg ccgtaggttt gttatttcag cagcgacggc aaggtcaagg
     1021 tcagtgctgg cacaaacgcc acgagcaaga cggtcaccag cagaaccagt aggtagggca
     1081 tcagcggctt gaccagtttg tcgattggtg tgttgcttaa gccactggca ataaacaacg
     1141 tcaggcccac tggtggtgtg atgtggccta acgccaatgc ggttaacaac aaaataccaa
     1201 agtgcagcaa atcaaacccc attgccatgg caatggggtg caagattggc gtgagtacga
     1261 tcaaagctgt ggccggcgtc agaaaacagc ctgtcagtaa cgccaccgca atgatgctta
     1321 tcgcaaacag cggtttggaa ttcatgtgct caagcaaaaa ggctgtcaga ttctgtggca
     1381 cttgctcaat ggtcaatatc cagccaaaca ctttggccgc cgcaattaac aacataattg
     1441 agccaatgga aatcatcgct gcgcgcatga attcaaatag tttggctcgg tcgagctcac
     1501 ggtaaaccac gcttgtcaga aacagaccgt agaccaaggc gatggcggcg gattcagtca
     1561 cggtgaatag gccagtaaag attcccccca gaataatcac gggtaacagg atggttgggc
     1621 cagctttaaa accggtgcgc gctagtgtct tgagcttgaa
//
LOCUS       DATBNL010000555         6374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_106494, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000555 DATBNL010000000
VERSION     DATBNL010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6374
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106494"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            341..1492
                     /locus_tag="VIC30_09575"
     CDS             341..1492
                     /locus_tag="VIC30_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013958402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7804664.1"
                     /translation="MKIKQSLMAVAAFSLITSVAQADINVGVVVSATGPAASLGIPEK
                     NTIELLPDTIGGEKVNYIILDDASDTTTAVKNTRKLLTEDEVDVIVGSTISPASLAMI
                     DVVAEAQAPMISMAASSRIVEPVDDKRRWVFKTPQNDQQMASAIVEHMAANNIKKVSY
                     IGFANAYGEGWLEQFKRQAGGQGIEVVATESFNPTDTSVTGQVLKAMAAKPDAVFIAG
                     SGTPAALPQKTLRQRGYKGPIYQTHGVANNDFLRICGKDCEGTLLPVGPVQMARDLPD
                     SHPVKASALEYVDAYEAVHGPGSVSSFGGYAWDAGILLQAAIPQALEVAQPGTPEFRA
                     AVRDALENVRNAAGASGIYNMSSTDHLGLDDRSRVMITIEDGKWTLLPQ"
     gene            1634..2671
                     /locus_tag="VIC30_09580"
     CDS             1634..2671
                     /locus_tag="VIC30_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011517936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7804665.1"
                     /translation="MDLDIALILTQDGITNGAIYALLAMALVLVFAVTRVVFIQQGEF
                     VAYGALTLAMIQNNIVPATIWMLIVMGAAVTCFRLVQALRQGHLRGGLSVALWNVAYP
                     VALGVSLFALPLADLPMVVQVALTLAVVVPIGPLMYQLAYQPIASAPVLILLIVSVAV
                     HISMVGLGLLFFGAEGFRTNAFSDAFFEWGPMLVSGQTIWVILTSVVLIIALYQFFDR
                     TIYGKALKATAINRVGARLMGIAPSLAGKLTFMLAAFIGALSGILIAPITTVYYDTGF
                     LIALKGFVAAIIGGLASYPLAAVGAIVVGLLEAFSSFWASAYKEVIVFTLIIPVLLWR
                     SLKSHHVEDDE"
     gene            2668..4461
                     /locus_tag="VIC30_09585"
     CDS             2668..4461
                     /locus_tag="VIC30_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009667377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEY7804666.1"
                     /translation="MRADRIVLLFFVVMALVAPALLSPYYVSVLNYIGLYAMVALGLV
                     LLTGVGGLTSFGQAAFVGMGAYTTAVLSTSTDLPVWLAWVGASPWLTLVVALLLTVGL
                     AFVLGALTLKLSGHFLPLGTIAWGISLYFLFGNLPGLGGHTGITGIPPVSFFGVTLDQ
                     GAEVYYLILVFLLVGMLFIHNLLDSRQGRAIRALKGGRIMAEAMGVDTNRSRMVIFLL
                     AAMLACMSGWLYAHMQRFINPTPFGLHIGIEYLFMAVVGGAGYVWGALLGAAIITIAK
                     QWLQDLLPALLGTSGNFEMIVFGLIMVLVLQRAPDGLWPVIRRLVPIRVPNKRVNPDA
                     VDLPRRPMPTAGDIILQAQEVTRKFGGLVANNRMSLDVKAGEVLALIGPNGAGKSTMF
                     NQISGVDTPTSGDVIFQGESVAGKESRDIARLGMSRTFQHVKLLSTMTVLENVAIGAH
                     LRGDKGVISAAWRFDRAQEASLLKEAAAQCARVGLGDLIYEQAGNLALGQQRILEIAR
                     ALCADPCLLLLDEPAAGLRLQEKRALGDLLRKLRSEGMAILVVEHDMDFVMGLADRVV
                     VMEFGEKIAEGLPEEVQKNPAVLEAYLGGVE"
     gene            4461..5240
                     /locus_tag="VIC30_09590"
     CDS             4461..5240
                     /locus_tag="VIC30_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008326737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804667.1"
                     /translation="MQTDSIAANATKNPVLKVDGMCVSYGNVQAVTDASISVGEGQIV
                     TVIGPNGAGKTTMLSAIIGLLKSSGNIEFQQQLEKAPQVEDLVAKGMNLVPEKRELFG
                     EMSVKDNLVLGAFQRYRMGQRDHEQTLAEVYELFPRLKERSTQTAGTLSGGERQMLAL
                     GRALMAKPRLLMLDEPSLGLAPLIVREIFRIISVLRRRGVSILLVEQNARAALQVADY
                     AYVLENGRIAMHGPAYELADDKRVVEAYLGFGGKHQDMLSS"
     gene            5274..5876
                     /locus_tag="VIC30_09595"
     CDS             5274..5876
                     /locus_tag="VIC30_09595"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEY7804668.1"
                     /translation="MEAMRILLDEHQSLAAIIHAIRHMIREIGAGNQKPDFKLLQAMV
                     HYLDAYPEKKHHPKEDEFLFAPLRARTDRANAVLDRLEAEHAISDERIAALTEALRNY
                     EADPAGQFEAFQTAFEKYAEFYREHMMAEEREVLPLIRECFTDEDWAFANAGFAKSQD
                     PMGGTRRSGDEEDFTKIFSKLVQAAPAPIGLGLGPYKDDE"
     gene            complement(5880..>6374)
                     /locus_tag="VIC30_09600"
     CDS             complement(5880..>6374)
                     /locus_tag="VIC30_09600"
                     /inference="COORDINATES: protein motif:HMM:NF042820.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix domain-containing protein"
                     /protein_id="HEY7804669.1"
                     /translation="IAAREHGASSPMADPPLPGASLAARFKDPGQPAVKDSAQLPERL
                     IQACVAAVNRLRFDDALAQRFLGCWLTEPNPLAVFEPAANPCELASGMRLTLDRRTRL
                     LYRGQALFINGELAPVKATGFLKTLANDRQVKLTPKMVQTMPAPVEACLLDWIDAGWV
                     HIRT"
BASE COUNT         1407 a         1467 c         1833 g         1667 t
ORIGIN      
        1 tccatcgatt gaatatactt ttaattctgt aattttcata atatttgtat ctattaagtt
       61 ttagggagga aaccaaaaac atgaaggaaa accctaataa atgtggtttt gccagaagga
      121 aggctacttt ttgttggtaa aaacgataca taaaattgtg ttgacgattt cttttgtatc
      181 atatctaatt ctcacagacc tttgtgagtc agcctcacgt tgggcggtat gtccttcaat
      241 tgcaagccga gcaaagcgtc tctgtccggg tactggcacg aaatggcagt aagacctgtg
      301 cctattagtt caacttttgc acaagattca aggagacaca atgaagatca aacaatcgct
      361 gatggctgtc gcagcctttt cgcttatcac atcagtcgct caggctgata tcaatgttgg
      421 ggtggtggtt tcggccactg ggcctgccgc atcgcttggc atccccgaaa aaaacacaat
      481 cgagcttttg cccgacacca ttggtggtga gaaggttaac tacatcatcc tcgatgacgc
      541 ctcggacact acgactgcag ttaaaaacac gcgtaaattg ctaaccgaag acgaggtcga
      601 tgtcatcgtt ggttcgacga ttagcccggc atcgctagcc atgattgatg tagtggctga
      661 agctcaggca cccatgatct cgatggctgc gtcttcgaga atcgttgaac cggtggacga
      721 taagcgccgc tgggtgttca aaacgccaca gaacgaccag caaatggcat ccgctatcgt
      781 tgaacacatg gcggctaata acattaaaaa agtgtcgtat attggttttg ctaatgccta
      841 tggcgaaggc tggcttgagc aattcaagcg tcaagcaggt gggcaaggta ttgaagtagt
      901 ggcaaccgaa agttttaacc cgaccgatac gtcggtgacg ggccaagtct taaaggcgat
      961 ggcagccaag cctgatgcag tcttcattgc aggctcaggc accccggcgg ctctgccaca
     1021 aaagaccttg cgtcaacgcg gctacaaagg gcctatctat caaacacacg gtgtagctaa
     1081 caacgatttc ttacgtatct gtggcaaaga ctgtgaaggg acgttgttac cggttgggcc
     1141 agtacaaatg gcacgcgact tgcccgatag tcaccccgtg aaagcaagcg cacttgaata
     1201 tgtcgatgcc tatgaggctg tacacggccc cggttcagtc tcgagctttg gtggttacgc
     1261 atgggatgct gggattttgc ttcaagcggc tattccgcaa gccttggaag tggcgcaacc
     1321 gggtacgcct gagtttaggg ctgcagtgcg tgatgcatta gaaaacgtgc gcaatgctgc
     1381 aggcgcatcg ggaatctaca acatgtcttc aaccgaccac ctcggtttag atgatcgttc
     1441 gcgcgtgatg atcacgattg aagatggtaa gtggacgttg ttgcctcagt gacagtgact
     1501 tagttaaagc aacacgagct cgatggcacc gcaggaggtg ccatcgctcg gccccacaag
     1561 gtttgtgcca gataccccac tgccaattca ggcacgacac gtgtggttgt attgatcaaa
     1621 gagacgatcg ttcatggact tagatattgc attgatactg acgcaggacg gaatcaccaa
     1681 tggggcgatt tatgccttgc tggcgatggc gctggtgttg gtgtttgctg ttacccgagt
     1741 tgtttttatt caacaaggtg agtttgttgc ctatggcgca ctgacccttg ccatgatcca
     1801 gaacaacatc gtgccggcaa ccatttggat gttgattgtc atgggcgcag cggtaacttg
     1861 tttccgtttg gtgcaagcgc tacgtcaggg acaccttcgg ggcgggttgt ctgttgccct
     1921 atggaacgtt gcatatcctg tggcccttgg cgtgtcctta tttgctttgc cgttggcgga
     1981 tttgcctatg gtggttcagg tggcattgac gttggcagtg gtggtgccaa ttggtccatt
     2041 gatgtatcag ctggcctacc agccgattgc gtctgcgcca gtgctgattc tgttgatcgt
     2101 gtctgtggcc gtccacatct caatggtcgg gcttggtttg ttgttttttg gagcagaagg
     2161 attccgcacc aatgccttta gtgatgcatt ttttgagtgg ggtcccatgc tggtctcagg
     2221 gcaaaccatt tgggtcattc tcacatcggt tgtgctgatc attgcgctct atcagttttt
     2281 tgatagaacc atttatggca aagcactgaa ggcaaccgct attaacagag ttggggctcg
     2341 cttaatgggt attgcgccaa gtctggcagg caagttgacg ttcatgctgg ctgcatttat
     2401 cggtgcttta tctggcatcc tgattgcccc catcaccact gtctactacg acacaggttt
     2461 tttgatcgcg ctaaagggtt tcgtggccgc gattatcggc ggattggcta gctaccccct
     2521 agcggctgtt ggtgccatcg ttgtcggtct gcttgaggct ttttcttctt tttgggcaag
     2581 cgcatacaaa gaagtcatcg tgtttacgtt aatcattcca gttttgttgt ggcgctcttt
     2641 gaagtcccac catgtggagg atgacgaatg agagcggatc ggattgtttt gctatttttc
     2701 gtggtgatgg cattggtggc accagccctc ttatcgccgt attacgtatc ggttttgaat
     2761 tacatcggtt tgtatgccat ggtcgcgctc ggcctggttt tgctcacagg tgttggaggc
     2821 ctgacaagct ttggtcaggc ggcgttcgtg ggaatgggcg cctacaccac ggcagtgtta
     2881 agtacgtcca ctgatttgcc tgtctggctg gcgtgggtgg gtgcatcacc ctggttgacg
     2941 ttggtggttg cattactgct gacggtgggg cttgcatttg tcttgggggc tttgacctta
     3001 aagttgtctg gtcatttctt accattaggc acgatcgcct ggggaattag tctgtatttt
     3061 ttgtttggaa accttcctgg actgggtggg cacacgggta ttacaggtat accgcccgtg
     3121 agtttttttg gcgttacgct tgatcagggt gcagaagtct actacttgat tttggtcttc
     3181 ttgctagtgg gtatgctgtt cattcataat ctgctcgact caaggcaggg acgtgccatt
     3241 cgcgcgctca agggtgggcg aatcatggct gaagcgatgg gggtcgacac aaaccgatca
     3301 cgtatggtga tttttctgct cgctgccatg ctggcctgta tgtcaggctg gctatacgca
     3361 cacatgcaac gtttcattaa ccccacgccg tttggattgc atatcggtat tgagtatctg
     3421 ttcatggccg ttgtgggtgg cgccggatac gtgtggggtg ctttgctagg tgctgccatt
     3481 atcaccattg ccaagcagtg gttacaagat ttgctgcccg ctttgctggg aacgagtggc
     3541 aattttgaga tgattgtgtt tggcctgatc atggtgcttg ttttgcagcg tgcccctgat
     3601 ggtttgtggc cggtgatcag gcgtttggtg ccaataagag tgccaaacaa gcgggttaat
     3661 cccgatgctg tggatctgcc ccgtagaccc atgcccacag ccggcgacat tattttgcag
     3721 gcgcaggaag tcacacgtaa gttcggcgga ctcgtggcga ataatcggat gtctttggat
     3781 gtgaaagcag gtgaggtact ggcgcttatc ggaccaaatg gcgcaggcaa aagcaccatg
     3841 ttcaaccaga tttcgggggt tgatacgccc acctctggcg atgtcatctt tcagggtgag
     3901 tcggtggctg gcaaagagtc cagagacatt gctcggttgg gtatgagtcg cacgttccag
     3961 cacgtcaaac tattgtccac catgactgtg cttgagaacg tcgctatcgg cgcccatctg
     4021 cgcggtgaca agggtgtcat tagtgccgcc tggcgttttg accgtgcgca ggaggccagc
     4081 ctacttaaag aagcggcggc ccaatgcgcg cgagtcggtc ttggtgatct gatttatgag
     4141 caggcgggaa atttggcttt aggtcagcaa cggattcttg agatcgctcg tgcgttatgc
     4201 gccgatcctt gccttttgct acttgatgag ccagcagccg ggctgcgcct ccaagaaaag
     4261 agggcgctag gtgatttgtt gcgcaagcta cggtctgagg gtatggccat cttggttgtg
     4321 gagcatgaca tggacttcgt gatgggttta gctgatcggg ttgttgtgat ggagttcggc
     4381 gaaaaaatcg ccgagggctt gccagaagag gtgcaaaaaa atccggcagt gcttgaggcc
     4441 taccttggtg gagttgagta atgcagacag acagcatcgc ggccaatgca acaaaaaacc
     4501 cagtgcttaa ggttgatggg atgtgtgtgt cctacggtaa tgtgcaggcg gtaaccgatg
     4561 ccagcattag cgtcggtgag ggtcaaatcg tgaccgtgat tggtccgaat ggagccggca
     4621 aaaccaccat gttgtccgcc atcattggcc tattgaaatc gtctggaaat atcgagtttc
     4681 aacagcagtt ggaaaaagcg ccacaggtcg aagacttggt ggccaaaggc atgaatctag
     4741 tcccagaaaa gcgcgaattg tttggcgaaa tgtcagttaa agacaatctg gtcttagggg
     4801 cgttccagcg ctatcgaatg gggcaacgtg atcatgagca aacattggcc gaagtctacg
     4861 aattgtttcc tcgcctaaaa gagcgtagca cccagacggc agggaccttg tcaggtggcg
     4921 agcgccagat gcttgctctg ggccgagcct tgatggccaa gcccaggttg ttgatgctcg
     4981 atgaaccaag cttgggttta gcaccgctga tcgtacgtga aatatttcgc atcatcagcg
     5041 tattacgtcg gcggggcgtc tcgattcttt tggttgagca aaatgcccgc gcggctttgc
     5101 aggtcgctga ttatgcgtat gttttggaga acgggcgcat tgccatgcac ggcccagcct
     5161 atgagttggc cgatgataaa cgggtggttg aagcatacct agggtttggg ggcaagcatc
     5221 aagacatgct ttcgagttga acagacatta tttgagtaga cgaggacgtt gcaatggaag
     5281 ccatgcgcat tttgcttgat gaacatcagt cactggccgc aattattcac gccattcgtc
     5341 acatgattcg tgagattggg gcgggaaacc agaagcctga ctttaagttg ctgcaggcca
     5401 tggttcatta cctagatgca tacccagaga agaaacatca tccaaaagaa gatgagtttc
     5461 tgtttgcacc gctgcgtgcc cgaaccgatc gggcaaacgc ggtgctagat cgactcgaag
     5521 cagagcatgc aatttcagat gagcgcatcg ctgcgttgac tgaggcgctt aggaactatg
     5581 aggcagaccc ggcgggccag tttgaagcgt ttcagaccgc atttgaaaag tatgctgagt
     5641 tttatcgcga acacatgatg gctgaagaac gcgaggttct accattgatc cgtgagtgtt
     5701 ttaccgatga ggactgggcg tttgcgaatg cgggtttcgc aaaatcccaa gaccccatgg
     5761 gaggtactcg ccgaagcggt gacgaagagg actttacaaa aatcttttcc aagctcgttc
     5821 aagcggcacc agcgcctatc ggtttagggt tgggtcccta caaagacgat gagtgataac
     5881 taggtgcgga tatgtaccca accggcgtca atccagtcaa gcaaacacgc ctcgactggt
     5941 gcgggcatcg tttgcaccat cttaggtgtt agcttcactt gacgatcatt ggctagtgtc
     6001 tttagaaagc ctgtggcttt gaccggtgcg agctctccat tgatgaataa tgcctggccc
     6061 cgataaagca ggcgtgtgcg tctgtctagt gtcaggcgca tgccagacgc cagttcgcag
     6121 gggttagccg cgggttcaaa gacagccagt ggattgggct cggtgagcca gcaacccaaa
     6181 aagcgttggg cgagcgcatc atcaaatcgc agtcgattca cggcggcaac gcaggcttga
     6241 atcagtcgtt cgggcaactg cgctgagtcc ttgactgctg gttgcccggg atctttaaag
     6301 cgtgcggcca ggctggcacc cggtaagggc ggatcggcca tggggctgct agccccatgc
     6361 tcgcgcgcgg caat
//
LOCUS       DATBNL010000556         3845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_56472, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000556 DATBNL010000000
VERSION     DATBNL010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3845
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56472"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..1589)
                     /locus_tag="VIC30_09605"
     CDS             complement(69..1589)
                     /locus_tag="VIC30_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEY7804670.1"
                     /translation="MTVIKEEDLIESIADAVQFISYYHPADYIAHLARAYEREQSPAA
                     KDAMAQILTNSKLCAEGRRPICQDTGIVNVFLKIGMDVKFDTKLDLQALCDEGVRRGY
                     LNPDNPLRASVLDDPLFARKNTRDNTPCVLSVELVPGNTVDVQVAAKGGGSENKSKFV
                     MLNPSDSLVDWVLKTLPTMGAGWCPPGMLGIGVGGTAEKAMLMAKQSLMEDIDMYELL
                     QRGPSNKLEELRVELYEKVNALGIGAQGLGGLTTVLDVKIKTFPSHAASKPVAMIPNC
                     AATRHVHFVLDGSGPVELKRPSLSDWPDVNWAPDYKASKQVDLNNLTKEEVASWGPGQ
                     TLLLSGKMLTGRDAAHKRIHEMLANGEPLPVDFKNRVIYYVGPVDPVRDEVVGPAGPT
                     TSTRMDKFTDMMLEQTGLSAMVGKAERGPVAIESIKKHQSAYLMAVGGAAYLVSKAIR
                     GAKVVAFEDLGMEAIYEFDVVDMPVTVAVDAQGTSVHETGPKEWSNRIAGIPVVTS"
     gene            complement(1635..2423)
                     /locus_tag="VIC30_09610"
     CDS             complement(1635..2423)
                     /locus_tag="VIC30_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEY7804671.1"
                     /translation="MTTDHTTKEDLVTTEVHDGVMVITINRPESRNAINYACAEQMAH
                     AFDQLDADPSLRIGVLTGAGKGFSAGMDLKDFAKSRIRPRIGNRGFAGLTEQPPAKPL
                     IAAVEGFALAGGFEMVLACDMVVAAKDAKFGLPEVKRGLVPGSGGMLRLPRRLPHPIA
                     MEMILTGDPFLAERAYQFGLVNELTEPGQALAGALALAARISVNGPLAVRAAKQIINT
                     ALDWPQDEMFARQAPMMQHIFESEDAREGSLAFAEKRKPNWLGK"
     gene            2614..3516
                     /gene="glyQ"
                     /locus_tag="VIC30_09615"
     CDS             2614..3516
                     /gene="glyQ"
                     /locus_tag="VIC30_09615"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEY7804672.1"
                     /translation="MLTFQQIILRLQDYWDQQGCALLQPYDMEVGAGTSHTATFLRAI
                     GPEPWRAAYVQPSRRPNDGRYGDNPNRLQHYYQYQVVLKPAPPDILELYIGSLKAIGI
                     EPTEHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCAPTTGEITY
                     GLERLAMYLQGVESVYDLVWTDRDGYHLTYRDVFHQNEVEQSTYNFEYANATVLFQHF
                     NDFEAQAKRLMEVPLALPAYEATLKAAHTFNLLDARGAISVTERAAYIGRIRNLSRSV
                     AQAYYESREALGFPMLNTREAKAA"
     gene            3513..>3845
                     /locus_tag="VIC30_09620"
     CDS             3513..>3845
                     /locus_tag="VIC30_09620"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEY7804673.1"
                     /translation="MSHAPSNDHAALLVELFTEELPPKALQRLGESFAQGITDGLTDK
                     ALLTGESITTAFATPRRLAVHITAVKATAPEQSFSEKLMPAKIGLDENGQATPALQKK
                     LAAKGLSHL"
BASE COUNT          865 a         1151 c          972 g          857 t
ORIGIN      
        1 gcaccgatgc ttggcgagca tacggatgag gttctacgcg agtttggcat agaaccctga
       61 ggtgaatatc agcttgtcac gaccgggatg cccgcgatgc ggtttgacca ctccttgggt
      121 cccgtctcgt gcaccgaggt accctgggca tcaacagcca cggtcactgg catgtcgacc
      181 acgtcaaact catagatggc ttccatgcca aggtcttcaa atgccacgac cttggcgcca
      241 cggatggctt tagacaccag ataggctgca ccaccaactg ccatgaggta ggccgactgg
      301 tgctttttga ttgactcaat cgcaaccggt ccgcgctcgg ccttacccac catggcactg
      361 agtccggttt gctcaagcat catgtcagtg aacttgtcca tgcgtgtcga tgttgtgggg
      421 cctgcaggac caaccacctc atcgcgcaca ggatcgaccg gtccgacgta ataaatcacc
      481 cggtttttaa aatccacggg caagggctca ccgttggcaa gcatttcatg gatccgcttg
      541 tgtgccgcat cacgtccggt gagcatcttg cctgagagca gcaacgtctg cccaggcccc
      601 cagctcgcaa cctcttcttt ggtgaggttg ttgagatcaa cctgcttgga agccttgtaa
      661 tctggtgccc aattgacatc gggccaatct gacagtgatg ggcgctttaa ctcaactggg
      721 cccgagccat cgagcacaaa gtgcacgtga cgtgtggccg cacagttggg gatcatcgcc
      781 acaggttttg atgcagcgtg cgagggaaat gtcttgattt tgacgtcaag cacggtggtc
      841 aagccgccca gaccttgtgc accaataccc agcgcgttga ctttttcata gagttcaacg
      901 cgcaactcct caagcttgtt cgaaggacca cgctgcagca actcgtacat gtcgatgtct
      961 tccatgagcg actgcttggc catcaacatt gctttctctg ctgtgccgcc caccccaata
     1021 ccgagcatgc caggcgggca ccaacccgcg cccatggtcg gtaaggtctt gagcacccag
     1081 tcaacgagtg aatcactcgg gttaagcatc acaaacttgg acttgttttc tgagccaccg
     1141 cccttggccg cgacttgcac atcgactgtg ttgcccggca cgagctcaac cgacagcaca
     1201 cagggcgtgt tgtcgcgcgt gttcttgcgt gcaaacagcg gatcatcgag caccgaggcg
     1261 cgtagaggat tatctgggtt caagtaaccg cgacgcacac cctcgtcaca caatgcctgc
     1321 aaatcgagtt tggtgtcgaa cttgacgtcc ataccgattt tcaggaacac gttgacgatg
     1381 ccagtgtcct gacaaattgg ccggcgtcct tcagcacaca actttgaatt ggtcagaatc
     1441 tgagccatgg cgtctttggc tgccgggctt tgttcacgct cgtaagcgcg tgccagatgg
     1501 gcgatatagt cggccgggtg gtagtagctg atgaactgca ccgcatcggc aatcgattca
     1561 atcaggtcct cttccttgat gacggtcatg gtttgcgatc ctttatggtt cggttatgtg
     1621 taatgaatta aattttactt gcccagccag ttgggtttgc gtttttctgc aaaagccagc
     1681 gatccttcac gggcatcctc agactcaaaa atgtgctgca tcataggtgc ctgacgggca
     1741 aacatctcgt cttgaggcca atcaagcgcg gtgttgataa tctgtttggc cgcacgcacc
     1801 gccaacgggc cgttcacgct gatgcgcgca gccaaagcca gtgcaccagc caacgcctga
     1861 ccgggctcgg tcagttcgtt gaccaagccg aactgatacg cccgctcagc cagaaatggg
     1921 tcgccagtca gaatcatttc catggcaatt gggtgaggca agcgccttgg caggcgcaac
     1981 atgccgccag atcccggcac aagcccacgc ttgacctctg gtagcccgaa ttttgcgtcc
     2041 ttggccgcca caaccatgtc gcaggccagc accatttcaa aaccacctgc caacgcgaaa
     2101 ccttcgaccg cggcgatcaa gggtttggcc ggcggctgct cggtcaaacc ggcaaaccca
     2161 cggttaccaa tacgtgggcg aatccgtgac ttggcaaagt ccttaaggtc catacctgcg
     2221 ctaaagcctt taccagcacc ggttaacacc ccgatacgca ggctcgggtc agcatcgagc
     2281 tgatcaaagg catgcgccat ttgctcggca cacgcataat tgatggcgtt gcgcgactct
     2341 ggacggttaa tcgtgatcac catgacaccg tcatgcacct ctgttgtcac caaatcttct
     2401 tttgttgtgt ggtctgtggt catattatcc cctttgtttt tcgacttttt acctgccgta
     2461 tgcccaaatc ataggcgatt agggggcttg gcgcgaaacg caaaaccagt gcgcgttaaa
     2521 atgctccaga atccgcgccg gtgcgtggtc tgaagctgcg ttttagctct gaccgagcca
     2581 gtgtcatctt tttgacttac acaagcgaca tacatgctga catttcaaca aatcatcctg
     2641 cgcctacagg actactggga ccagcaaggc tgtgccctgt tgcagcccta tgacatggaa
     2701 gtcggtgctg gaacttcgca caccgcgact tttttacgtg ccattggccc agagccctgg
     2761 cgcgcggcat atgttcagcc ctcacgacgc cccaacgatg gccgctatgg tgacaaccca
     2821 aaccgcttac aacactacta ccagtatcag gttgttctca aacccgcccc accagatatt
     2881 ctcgagcttt acatcggttc tctcaaggcc attggtattg aaccgaccga acacgacatt
     2941 cgctttgtcg aagacgattg ggaaaacccc acgcttggtg cctgggggct tggctgggaa
     3001 gtttggctaa acggcatgga agtcacacaa tttacctact tccaacaggt cggtggcatt
     3061 gactgcgctc cgaccactgg tgagatcacc tacggcctag agcgcctggc gatgtacctt
     3121 caaggcgtcg aaagcgtcta cgacctggtc tggactgacc gtgatggcta tcacctgacc
     3181 tatcgcgacg tcttccatca aaacgaagtc gagcaatcga cctacaactt tgaatacgcc
     3241 aacgccacgg tcttgtttca gcactttaac gacttcgagg cccaagccaa gcgactgatg
     3301 gaagtgccgc tggcacttcc cgcctatgaa gcaacgctta aagccgcgca caccttcaat
     3361 ctgcttgacg cccgtggcgc catcagcgtg accgagcgcg ccgcctacat tggtcgcatc
     3421 cgtaatctct ctagatccgt ggcacaggcc tactacgagt cgcgcgaagc cctaggattc
     3481 cccatgttga acacccgcga ggccaaagcc gcatgagtca cgctccctcc aatgatcacg
     3541 ccgcacttct agttgaactc tttaccgaag aactgccacc caaagccttg caacggctcg
     3601 gtgaaagctt tgctcaaggc atcacggatg gcttaactga caaagcgctg ctcacaggtg
     3661 agagcataac caccgcattt gccacaccta gacgcttagc ggttcacatc acggccgtca
     3721 aagccaccgc acccgaacag tcgttttctg agaaactcat gcccgcaaaa atcggacttg
     3781 atgaaaacgg ccaagccacc cctgccctgc aaaagaaact cgctgccaaa gggctatcac
     3841 atctc
//
LOCUS       DATBNL010000557         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_156379, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000557 DATBNL010000000
VERSION     DATBNL010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156379"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="VIC30_09625"
     CDS             <1..521
                     /locus_tag="VIC30_09625"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804674.1"
                     /translation="ALKKKLNWSTLRHIVRESVYTSGMILAILSSALVFGYLLTRLRL
                     PQELVGWITEQGFSEITVLFAIFLVLIVMGMFLDVVSVILIATPLLLPIIKVFQYDPI
                     WFGIIIAIVSEMAVITPPVGLNLFVIKGLSPSNVSLMTVARGSMPFFFILAFAVVLFT
                     VFPQLILWLPFA"
     gene            823..1389
                     /locus_tag="VIC30_09630"
     CDS             823..1389
                     /locus_tag="VIC30_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010460976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804675.1"
                     /translation="MRNLFAASAAALTVMAAPVLADNHGPNVFNGNITEDEVFNAEKG
                     WCNALLEISAANMKGGQAAAKKVAENVLDTGYAYDNGGVLFKPTLTVAPQTFRSTREG
                     ALAYFVGGDPKFPNDKGFALGDWTKCDVLTDGVLLMGNNAISMGQVTVTNKQGQATTV
                     DKTWGWMKDDQGNLRIVLHHSSLEYTGN"
     gene            1627..>1919
                     /locus_tag="VIC30_09635"
     CDS             1627..>1919
                     /locus_tag="VIC30_09635"
                     /EC_number="4.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005794370.1"
                     /note="catalyzes the formation of acetoacetate and
                     acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEY7804676.1"
                     /translation="MTTTNIPDFVQIVDVAARDGLQNEKQVVPTAVKCSLIERLSDAG
                     VKELETTSYVSPKWVPQMADNHDVMQRLVRYSGVKHAVLVPNMKGFEAAVLDTP"
BASE COUNT          434 a          445 c          519 g          521 t
ORIGIN      
        1 tggcgctcaa gaaaaaactc aactggtcaa cgcttagaca cattgtgcgt gagtcggtct
       61 acacctctgg catgatcctg gcgattctgt cgagcgcgtt ggtattcggt taccttctca
      121 cgcgtcttcg tttgccacaa gaactggtgg gctggatcac tgagcagggt ttttctgaga
      181 tcaccgtgct gtttgctatc tttttggtgc tcatcgtgat ggggatgttt cttgatgtgg
      241 tatcagtgat tctgattgcc acaccacttt tgttacccat cattaaagtg tttcagtacg
      301 acccaatctg gtttggcatc atcattgcaa ttgtctctga gatggctgtc attacaccgc
      361 cagttgggct caatctattt gtgatcaaag gactgtcacc gagtaatgtg tcgctgatga
      421 cggtggcgcg aggctcgatg ccatttttct ttattttggc cttcgcagtc gtgttgttca
      481 cggtcttccc acagttgatt ttgtggttgc cgtttgcctg atgtgcttgt ttgataaccg
      541 gttctcaggc gcgagctaag gggccgacag tggcggtgat ttattgatag tccgcgcccg
      601 cgagacgctc cgggtgcgga ctcgttttgt aatacaagca agtatttttt cccatgccgt
      661 tggctcacgc tcaccgaaga aagatgttgt tgccatgtca caaatcctag ggtaatcttg
      721 ctgatgacgt aactaaaggt cactttttta gcgagctacg atggttcttt gctcgactta
      781 tgtgcaacac gtcgtctatt aagcaacttt aaggagaatt taatgcgtaa cctgtttgcc
      841 gcttctgctg cggctctaac ggtgatggct gcgcctgtgt tggccgacaa tcacggcccg
      901 aatgtcttta atggcaatat taccgaggac gaagtcttta atgctgagaa aggttggtgc
      961 aacgcgttgc ttgaaatcag tgcggccaac atgaagggcg gccaggcagc agccaagaaa
     1021 gtggctgaga atgtgcttga tacaggctat gcctatgaca atggtggtgt gttgtttaag
     1081 ccaaccctga cagtcgctcc ccagacattt cgtagcactc gcgaaggtgc tttggcctac
     1141 tttgtcggcg gcgaccccaa gtttcctaat gacaagggat ttgcattggg tgactggacc
     1201 aaatgcgatg tcttgaccga tggtgttttg ctgatgggca acaacgccat ttcgatgggg
     1261 caggtcacgg tgaccaataa gcaaggtcag gcaaccacgg tcgacaagac ctggggctgg
     1321 atgaaagacg atcaaggcaa tctgcgtatt gtgttgcatc actcatcgct tgagtacacc
     1381 ggtaactaag ctctcttagc aatggttgtc ctaaaatccc gagtgctgca aaacatgcag
     1441 ttctcgggat ttttttgttt tggggtgtcg ctttggttgt ggctgcacca tcggttgtcg
     1501 caaccggtat gatcaaacca acgatcatca aaccaacgat caacgcgacc gggagtggct
     1561 acacccgcat gcgcaatgcg caggcctcgg gtgactggct ccaaaggcat gacaggtatc
     1621 aaaggcatga caacgacaaa tattccagac tttgtgcaaa ttgtggatgt ggctgcgcgc
     1681 gacggtctgc aaaacgagaa gcaagtcgtt ccaacagcag ttaagtgttc gctgatcgag
     1741 cgattaagcg atgcgggcgt taaagaactc gagaccacca gctatgtttc gccaaagtgg
     1801 gtgccacaaa tggctgacaa tcatgatgtg atgcagcgcc tggttcgata cagcggcgtg
     1861 aaacatgcgg tacttgtgcc gaacatgaaa ggctttgagg cagctgtcct tgatacccc
//
LOCUS       DATBNL010000558         3207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136364, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000558 DATBNL010000000
VERSION     DATBNL010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136364"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1165)
                     /gene="lepA"
                     /locus_tag="VIC30_09640"
     CDS             complement(<1..1165)
                     /gene="lepA"
                     /locus_tag="VIC30_09640"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEY7804677.1"
                     /translation="MQHIRNFSIIAHIDHGKSTLADRLIHRCGGLADREMSAQVLDSM
                     DIERERGITIKAQTASLLYQAADGQAYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKMDLPQADPDGARQEIEDVIGIDASDAVA
                     ASAKTGMGIEEILEAIVAKVPPPKGDPSAPLQALIIDSWFDNYVGVVMLVRVINGVMR
                     PKDKLRFMATGALHPCEQLGVFTPKAIPRTELSAGQVGFVIAGIKELKDAKVGDTITL
                     VNKPAAEPLPGFKEIKPQVFAGLYPVESSEYDQLRDSLEKLKLNDAALMYEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFGIDIITTAPSVVYEVELNDDQVINIESPS"
     gene            complement(1287..2693)
                     /locus_tag="VIC30_09645"
     CDS             complement(1287..2693)
                     /locus_tag="VIC30_09645"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEY7804678.1"
                     /translation="MAMLWQFSGTAKANTVGLPDFTAIVEETENAVVNIRTTATVSSG
                     GRSGQDPYEMFRWFFGPDFQPPGGGGEPPQQRRGNPEPEQERTVPRGVGSGFFISDDG
                     YILTNHHVIDDASEVFVTLTDGEEYSAKVIGSDARTDVALLKIDVTGMDTLPIGTAQD
                     LKKGQWVLAIGSPFGLESTVTAGIVSAIGRETGDYLPFIQTDVAVNPGNSGGPLLDLN
                     GEVVGINAQIVSRSGGFMGISLAIPIDEAMEVAAQLQENGKVTRGRIGVQIGEVSKDV
                     AQASGLDNEQGAMVSRVVPDGPAEKAGVQPGDIILDFDGKPIEKWSDLPRVVGSTAPG
                     TEAKMKVWRKGKPVTLDITVGEMPSSEPVAAAPEPAKPKSEGQSALGITVVALTDDEK
                     KELRVNHGVKVTAIAGAGANAGLVDGDVILTVGNTDVSSAEQFVELANQAEAGKPLGM
                     MVQRNGQAQWILVRPPKK"
     gene            complement(2870..>3207)
                     /locus_tag="VIC30_09650"
     CDS             complement(2870..>3207)
                     /locus_tag="VIC30_09650"
                     /inference="COORDINATES: protein motif:HMM:NF028497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HEY7804679.1"
                     /translation="PSQTDFEALGWFYREPPGYRPVAELERQFRDGRTVKQVILTDGL
                     ATISIFIEPYRSDLSHHQMTGAKRSGAVNLFGKRYGGHWVMVAGEAPAPTVQSLAQSI
                     VKTGILHNK"
BASE COUNT          735 a          937 c          804 g          731 t
ORIGIN      
        1 gtgacgggct ctcaatattg atgacctggt catcattgag ctcaacctcg tagaccaccg
       61 acggcgctgt ggtaatgatg tcgataccaa actcacgttc aagacgctct tgcacgattt
      121 caaggtgcag tagccccaga aacccgcaac gaaatccaaa gccaagggcc tgcgaaactt
      181 ccggctcata catcaaggcc gcgtcgttga gcttgagctt ttcgagcgag tcgcgcaact
      241 gatcatattc gctgctctca accggataca gacccgcaaa tacctgcggc ttgatttctt
      301 taaaacccgg cagcggctcg gccgctggct tattcaccaa cgtaatggtg tcaccgacct
      361 tggcgtcttt gagctctttg ataccggcaa tgacaaaccc gacttggcct gctgagagct
      421 ccgtacgagg gatggcttta ggcgtaaaca caccaagctg ctcgcaggga tgcaaggcac
      481 cggtggccat aaaacgcagc ttatctttgg gtcgcatcac cccattgatc acacggacca
      541 acatcaccac gccaacgtag ttatcgaacc atgaatcaat gatcaaggcc tgcagtggcg
      601 cactcgggtc gcccttcggt ggtggcactt tggccacgat ggcttctagt atctcttcaa
      661 tgcccatgcc ggtcttggca ctcgcggcaa cggcatcact ggcgtctatg ccgatgacgt
      721 cctcaatttc ttgacgtgca ccatcaggat cggcctgcgg cagatccatc ttattgagca
      781 cgggtacaac ctcaacaccg aggtctatgg cggtgtaaca gttggccacg gtctgtgcct
      841 ccacaccctg cgaggcatca acaactagca aagcgccttc gcaggccgac aacgagcggc
      901 taacctcata cgagaagtca acgtgcccgg gcgtgtcaat caggttgagc tgataggctt
      961 gtccgtcagc ggcctgatag agcaacgatg ctgtctgcgc cttgatcgtg atgccgcgct
     1021 cacgctcaat atccatagaa tcaagcactt gcgcggacat ctcgcgatcc gccaatccgc
     1081 cacagcggtg gatcaagcgg tcagccagag tagatttgcc gtgatcaatg tgggcaatga
     1141 tcgagaaatt acgaatatgc tgcatggaac ctgcgaactt taggattaac ttgcatcggg
     1201 gcaagtcacc gagcaaacaa aaggaaaggg gcatgcgccc ctttcgatgt gctgcgtcac
     1261 tagcagggta ttttaccctg atgtggttac ttcttcggtg gacgcaccaa aatccactgg
     1321 gcttgtccgt tgcgctgcac catcatacca agcggtttac ccgcctcggc ctgattggct
     1381 aactcaacaa attgctcagc agatgaaaca tcggtgtttc cgaccgtcaa aatcacgtca
     1441 ccatcgacca acccagcgtt tgcgccggca ccagcaatcg ccgtgacttt aacgccatgg
     1501 ttgacacgta actctttttt ctcgtcatcg gtcagggcga ccacggtaat gccaagtgcg
     1561 gactgtccct cactcttggg cttagccggc tcaggtgctg cggccacagg ctcgcttgaa
     1621 ggcatctcac cgacggtgat gtccagtgtg acgggcttgc ctttacgcca aaccttcatt
     1681 ttggcttcgg taccaggcgc tgtggatcca actacgcgcg gcaaatcaga ccacttttcg
     1741 atcggctttc catcgaaatc caagatgatg tcaccgggct gtacaccggc tttctcagca
     1801 gggccgtcag gtacaacacg gctcaccatg gcaccttgct cattgtccaa accactggct
     1861 tgggcgacgt ccttgctgac ctcaccaatc tgcacgccga tacgtcctcg ggtgactttg
     1921 ccgttttctt gtaattgcgc ggctacttcc atggcctcgt caattgggat ggccagtgag
     1981 atacccatga acccgccgct gcgcgaaacg atctgcgcgt taataccgac cacctcacca
     2041 ttcaaatcca agagtgggcc acccgagtta cccgggttga ctgccacatc ggtctgaata
     2101 aagggcaaat aatcgccggt ttcacgccca atggcgctaa caatgccagc agtcacggtt
     2161 gactccaagc caaacggaga cccgatggcc aacacccact ggcctttttt caggtcttgt
     2221 gccgtgccta tgggcaaggt gtccataccg gtgacatcga ttttgagcaa agccacgtca
     2281 gtgcgtgcat cgctaccgat aactttggcg ctgtactcct caccgtcagt tagcgtgaca
     2341 aaaacctcgg atgcatcatc gatgacgtga tgattggtca gaatgtagcc atcatcgctg
     2401 atgaagaagc ctgagcccac gcctcggggc actgtgcgct cttgctctgg ctccggattg
     2461 ccgcgccgct gctggggcgg ctcaccgcca ccgcccggtg gctggaaatc gggcccaaag
     2521 aaccagcgaa acatctcata cgggtcttgg cctgagcgcc cgccactact cacggtagcg
     2581 gtggttcgga tgttaacgac cgcattctca gtctcttcga caattgccgt gaaatcaggc
     2641 aagccgaccg tgttggcttt tgctgtccca gaaaactgcc atagcattgc catcaacaca
     2701 cttaaaaaca tcaagcgcca aaggttgacc acctgcgccc cacgtgcagg cttggctgag
     2761 gttaattgca tcgcactttg attcgtcatg ttcactccgt gtattgcaat atcgtggttt
     2821 aaatcgtgat tagtcgtgat tactcgtgat tactcgtgat tacttgtaat tatttattgt
     2881 gcaaaatgcc agtcttaacg atggattgcg ccaggctctg taccgttggg gctggcgcct
     2941 caccggcaac catgacccaa tgcccaccat aacgcttacc aaacaggtta actgcacctg
     3001 aacgctttgc cccggtcatc tgatgatgag acaaatctga acgataaggt tcaataaaaa
     3061 tagagatcgt ggctaaacca tcggtcaata tgacttgctt gaccgttcgc ccatcacgga
     3121 actggcgttc aagttcggcg acaggtcggt atcccggtgg ctcacggtaa aaccagccca
     3181 atgcctcgaa atcagtctgg cttggca
//
LOCUS       DATBNL010000559         4567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136376, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000559 DATBNL010000000
VERSION     DATBNL010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136376"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VIC30_09655"
     CDS             <1..545
                     /locus_tag="VIC30_09655"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HEY7804680.1"
                     /translation="LSSALMFPRVLVVSAVVAPPLLAVLIWPLALAMVCYLVGAGWLA
                     FASTKHAQDSQQAVDTGLQNPFQIGQALRFTLILVVIMFAVEVARDYFGDAGVWVMAA
                     ISGAADVDAINLSLSRIAGDELTVLLAAQGILIAALSNSLFKLVLAWSIGGNAIGLRT
                     LPFVAAGMLAAGLSMGWVAL"
     gene            661..1266
                     /locus_tag="VIC30_09660"
     CDS             661..1266
                     /locus_tag="VIC30_09660"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020200693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEY7804681.1"
                     /translation="MKTILPESIDAKQAYKLLTGVIVPRPIAWVSTLSKNGVTNLAPF
                     SYFTSVANKPPMVGINIGQEYGGRKDTARNILETEQFVVNIAHWPQLDALHASADHHP
                     PETSEIELLGLSTEASTLIKPPRIAEAPVQMECEFRQMLPFGTGGSEFYVGEVVAFHL
                     RDDIIDTDTLRVDSVALAPICRLGGPFYSSLGEITKMRSRQ"
     gene            complement(1291..1920)
                     /locus_tag="VIC30_09665"
     CDS             complement(1291..1920)
                     /locus_tag="VIC30_09665"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HEY7804682.1"
                     /translation="MKSTSIGRYTSILTLAYCVLFGASAQAQTLHHGNNMSHSPYAGQ
                     QNRTITSLSADDQEALSKGEGWGLAKPAELNGVPGPAHLLELGEEIGLSAEQTEQLQK
                     LFRDMKAQAIALGNEYMAAEQALDDYFRKAELSDRTLRQAVDQAEQARANLRFLHLSY
                     HHRTLDVITPEQVQKYNQLRGYDQVMSDPCANVPEGHDPVMFRKHMGCD"
     gene            complement(1977..2900)
                     /locus_tag="VIC30_09670"
     CDS             complement(1977..2900)
                     /locus_tag="VIC30_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012356734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY7804683.1"
                     /translation="MMNFLGDHPIVKTADIWTTLPECFREQATQTPWAQANRGGEVID
                     SFLEGPVFDNTGNLYVTDIPYGRIFKITPHAQWELIVQYDGEPNGMKWLAEDVLVIAD
                     YRNGLMQLDLKTRAVSPVLQRRNSESFKGVNDLTFDSRGNLYFTDQGQTGLHDPTGRV
                     YRLRPDGQLDLLLDNVPSPNGLVLSPNEQVLYVAATRGNEVWRAPFMADGSVSKVGRF
                     FSSYGPSGPDGLAMDASGHLMVANPGLGCVWRLNERAEPTEVWQSPIGRALTNLAFAP
                     GKTCAFATESASGAILRFETPYAGTPVHVGL"
     gene            3111..4463
                     /locus_tag="VIC30_09675"
     CDS             3111..4463
                     /locus_tag="VIC30_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007748719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY7804684.1"
                     /translation="MNNVTDAKHLQQSQELDMSNFWMPFTANKQFKSAPRLFKQAKGM
                     YYTTVDDRQVIDAVAGLWCVNAGHGRDEIAQAVANQVSNMDFAPTFQMGHPLAFEAAT
                     RVAEVMPEGLDRIFFANSGSEAVDSALKIALAYHRARGQGQRTRFIGRERGYHGVGFG
                     GISVGGIVANRKAYSANLMPGVDHMPATLNIEKAAFSHGQPAWGEHLADELERILALH
                     DPSTVAGVIIEPVSGSAGVLIPPQGYLQRLRDICTKHGILLIFDEVITGFGRLGKATA
                     SEFFGVTPDLITMAKAINNAAIPMGAVAASREIHDTIVDSGPANGIELFHGYTYSAHP
                     VAAAACLAAQDIYEREALFERAAAMAPKFEAAIHDLKGEPFVKDIRNLGLVGGVELES
                     REGQPGTRAYDAFLECFKHGVMVRFTGDILAFSPPLIIEDSHIDQIFSTVRNALRAVH
                     "
BASE COUNT          965 a         1180 c         1300 g         1122 t
ORIGIN      
        1 tactaagctc ggcgctgatg tttcccagag tgctggtggt cagcgcggtt gttgcaccgc
       61 cgcttctggc ggtcttaatt tggccgctgg cgttggccat ggtctgctat ctggtcggtg
      121 cgggctggct agcctttgca agcaccaaac acgcgcaaga ctcccaacag gcggtcgaca
      181 cagggctgca aaacccattt caaatcggtc aggcattgcg ttttacgctg attctggtgg
      241 tcattatgtt cgctgttgaa gtggcgcggg attatttcgg ggatgctggc gtttgggtca
      301 tggcggctat ctcgggcgca gccgatgttg atgccattaa tttgtctctc tctcggattg
      361 ctggcgatga gttgaccgtt ttgctcgctg cgcaagggat tttgattgca gcgttgtcca
      421 acagcttgtt caaattggta ctggcttggt cgattggcgg caatgccatt ggcttgcgaa
      481 cattgccgtt tgtcgcggcc ggcatgttgg ctgcaggttt atcgatgggg tgggtggcgc
      541 tttaacactt tctcatatag cgcatcgcgg cgcttatcta cgaacgatgg cattgagttg
      601 tccacagcgg tacagtgagt tcgtcttcgt ataccaacct taccgtggag cacctcgccc
      661 gtgaaaacca tcctacccga atcaatcgat gccaaacagg cctacaagct gctaaccggg
      721 gtcatcgtcc ctaggccgat tgcctgggtg agcacactgt caaaaaacgg ggtcaccaac
      781 ttagcgcctt ttagctactt caccagtgtg gccaacaaac cgcccatggt gggtatcaat
      841 atcggccagg agtacggcgg gcgcaaagac acggctcgaa acatattgga gaccgagcag
      901 tttgtggtca acatcgcgca ttggccgcag cttgatgcgt tgcatgccag tgcggatcat
      961 catccgcctg agaccagtga aatcgagttg ctcgggttaa gcactgaggc ctctaccttg
     1021 atcaagccgc cacgcattgc cgaggcgccc gtgcaaatgg aatgtgagtt tcgccagatg
     1081 ttgccatttg gcacgggggg ctcggagttc tatgttggtg aggtggtcgc ctttcacttg
     1141 cgtgacgaca tcatcgacac cgacacgctg cgggtggact cggtggcact agcgccgatc
     1201 tgtcggcttg gcggaccttt ctactcttct cttggcgaga tcacaaagat gcgctcacgc
     1261 caataattgc gccagcgatg acgcaatgag ctagtcacag cccatgtgct tgcgaaacat
     1321 caccgggtca tgcccttctg ggacgttggc gcatgggtcg gacatgacct ggtcatagcc
     1381 ccgcagctgg ttgtattttt gtacttgctc gggtgtgatg acatcgagcg tgcgatggtg
     1441 ataggacaga tgcagaaagc gtagattggc gcgcgcctgc tcggcctggt cgactgcttg
     1501 gcgaagtgtt cggtcgctaa gttcagcctt gcggaaatag tcatccaatg cttgctcggc
     1561 agccatgtat tcattgccaa gtgcgatggc ctgagccttc atgtcgcgaa acagtttttg
     1621 tagttgttca gtttgttcgg cgctcaagcc gatctcttcg ccaagttcga gcaggtgggc
     1681 tgggccggga acaccattga gttcggccgg cttagccagc ccccaacctt cgcctttgct
     1741 caatgcctct tggtcatcgg ccgacaacga ggtgatggtg cggttttgtt gaccagcgta
     1801 tgggctgtgg ctcatgttat tgccgtggtg tagggtttgt gcctgggctg aggcgccaaa
     1861 cagcacgcag tatgccaagg tcaagataga ggtgtatcga ccaatcgatg ttgatttcat
     1921 ttgtgtcact cgtttatttg actagatcgt ttcaaagctt tgtgtctagt cgtggttcac
     1981 aggccgacat ggacaggtgt acctgcatag ggagtttcga atcgtagtat ggcaccagac
     2041 gccgactcag tggcaaatgc gcaggtcttg cctggggcaa atgccagatt ggtgagcgca
     2101 cggccaatag ggctttgcca aacctcggtg ggctctgcac gctcgtttag ccgccagaca
     2161 caacccaaac ctgggttggc aaccatcaaa tgtccgctag cgtccatggc cagtccatct
     2221 ggtcccgagg ggccgtatga actaaaaaac cggccaacct tagagacact accgtcggcc
     2281 ataaaaggtg cacgccaaac ctcgttgcca cgagtggcag ccacgtatag cacttgttcg
     2341 ttcggtgaca gaaccagacc attggggcta ggcacattgt ctagtagcaa atcgagctgt
     2401 ccgtctgggc gcaagcgata gacgcgtccc gttgggtcat gtagcccagt ttgcccttgg
     2461 tcagtgaaat acaggttgcc acggctgtca aaggtcaaat cgttcacacc cttaaacgac
     2521 tcactgttgc ggcgctgcaa taccgggctc accgcccgtg tttttagatc gagttgcatg
     2581 agtccgtttc gatagtcagc gatgaccagc acgtcttcgg caagccactt catgccattg
     2641 ggctcgccgt cgtactgaac gattaattcc cattgggcgt ggggcgtgat cttgaaaata
     2701 cgaccgtacg gaatgtcggt cacatagagg ttgcctgtgt tgtcaaatac cggcccttcg
     2761 agaaacgagt cgatgacttc gccaccgcga ttggcttgcg cccaaggggt ttgcgttgcc
     2821 tgctcacgaa agcactcggg cagtgttgtc cagatatcgg cggttttaac aatcgggtgg
     2881 tcacccagaa agttcatcat gattggatca ctccaaattg gctcggctag agttgcaagt
     2941 caggcttaga gtcagtgcca ccgttaatcg gtgccatcgt taaatatacg cagtagtcat
     3001 gtacgaattc tcgaatctct taacacgagc ccacaaaagc gctattctcg gtgtaacaca
     3061 taagacatgg acaattaatt tgtccaccat tgccaataga gaggcacacc atgaacaacg
     3121 tcactgacgc caagcacctg cagcagtccc aagagttaga catgtctaat ttctggatgc
     3181 cctttacagc caataaacaa tttaaatcgg cgccgcgttt gttcaaacag gctaaaggca
     3241 tgtactacac cacggttgat gacaggcaag tcattgatgc ggtggcaggt ttgtggtgcg
     3301 tcaatgcggg acacggtcgc gatgaaatcg cgcaggccgt ggccaaccaa gtctcaaaca
     3361 tggacttcgc gcctaccttc cagatggggc acccactggc gtttgaggca gccacgcgcg
     3421 tggctgaggt gatgcctgaa gggttggatc gcatcttttt tgcgaattcg ggttcagaag
     3481 ctgtcgacag tgccctcaaa attgcattgg cctaccaccg tgcgcgcggg caaggtcagc
     3541 gcacgcgctt tattgggcgt gagcgtggct accacggtgt gggtttcggt ggcatttcag
     3601 tcggcggtat tgtggcaaac cgcaaggcct attcggctaa cttaatgcct ggcgttgatc
     3661 acatgccggc tacgctgaac attgagaaag cagcttttag ccacggtcaa ccggcctggg
     3721 gtgagcactt ggccgatgag cttgagcgca ttctggcgtt gcatgaccca tcgacagtgg
     3781 ccggtgtcat catcgaaccc gtctcgggtt cagccggtgt gcttatccct ccacaaggct
     3841 acttgcagcg tttgcgtgac atctgcacca agcacggtat tttgttgatt tttgatgagg
     3901 ttattaccgg gtttggtcgc ctaggtaagg ccactgccag tgaattcttt ggcgtcaccc
     3961 cggatctgat caccatggcc aaggccatta acaacgcggc tattcccatg ggggcggttg
     4021 cggcaagtcg tgagatccat gacacgatcg tcgacagtgg accagccaat ggtatcgagc
     4081 tgtttcacgg ctacacctat tcggcgcacc cggtggctgc ggccgcgtgt ttggctgcac
     4141 aggatattta cgagcgtgaa gcgctgttcg aacgtgccgc ggccatggca cccaaatttg
     4201 aagcagccat ccatgacttg aaaggcgagc cctttgtgaa agacatccgc aatttgggtc
     4261 tggtgggcgg tgtcgagctc gagtcacgtg aaggacaacc gggtacacgc gcctatgacg
     4321 ccttcctcga gtgctttaag catggtgtca tggttcggtt taccggcgac atcctggcgt
     4381 tctcaccacc gttgattatc gaagactcgc acatcgacca gattttctcg acggttagaa
     4441 atgcgttgcg agcggtgcat taactaagtg ctgtttgacg aaggctgtta aacaaacgct
     4501 gttgaacaag tggtaataaa gaacccagat tagctgggtt tttattggct tgtgtcaagc
     4561 aagctat
//
LOCUS       DATBNL010000560         1558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_156396, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000560 DATBNL010000000
VERSION     DATBNL010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156396"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1239)
                     /gene="dnaB"
                     /locus_tag="VIC30_09680"
     CDS             complement(<1..1239)
                     /gene="dnaB"
                     /locus_tag="VIC30_09680"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEY7804685.1"
                     /translation="MNQPPESDLQYLRVPPHSIEAEQSVLGGLLLDNAAYERLTDLLS
                     DGDFYRHDHRLIWQHIARLINLSRPADVITVNESLTSAGKAEEVGGLSYLNALAHNTP
                     SAANIRRYAEIVRERSMLRKLVAVADDIAATALNPQGKEARQLLDEAESRVFKIAQEG
                     ARSAQGFQEIQPLLAQVVERIDELYHREGDSDVTGIPTGFIDLDRMTSGLQGGDLVIV
                     AGRPSMGKTSFSMNVAEHVAIEQGLPVAVFSMEMGAVQLAMRMLGSVGVLDQHRMRTG
                     KLLTDDWPRVTHAVQRMQNAQVYIDETPGLTAVDLRARARRLARQCGRLGLIVIDYIQ
                     LMSSSGGGENRATEISEISRALKSLAKELECPVVCLSQLNRSLEQRPNKRPVMSDLRE
                     SGAIEQDADVILFIYRDEVYN"
     gene            complement(1449..>1558)
                     /locus_tag="VIC30_09685"
     CDS             complement(1449..>1558)
                     /locus_tag="VIC30_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal L9 C-terminal domain-containing
                     protein"
                     /protein_id="HEY7804686.1"
                     /translation="MNDGAIKAVGEYQIQVALHPDVVSDVTVKVEGELV"
BASE COUNT          388 a          439 c          395 g          336 t
ORIGIN      
        1 gttgtacacc tcgtcgcgat aaataaagag aatcacatca gcgtcttgct caatggcacc
       61 cgactcgcgc aagtcactca tgaccggacg tttgttagga cgttgttcaa gagatcggtt
      121 taactgggac aaacaaacca cagggcactc aagctctttg gccaaagact tcagtgcacg
      181 actgatttcc gagatttccg tggcgcggtt ttcaccacca ccgcttgagg acatgagttg
      241 gatgtagtcg atcacaatca agcccagacg cccacactga cgagccagac gtcttgcgcg
      301 agcacgtagg tcaactgcag ttaaaccagg ggtctcgtcg atgtagactt gcgcattttg
      361 catgcgttgt accgcatggg tcacgcgcgg ccagtcatcg gttaagagct tgccggttcg
      421 catgcgatgt tgatcgagca cgccgaccga cccgagcatc cgcatggcta gttggaccgc
      481 acccatctcc atagaaaaca cagcaactgg taagccttgc tcaatggcca cgtgttcagc
      541 cacgttcata gaaaacgacg ttttacccat ggagggtcga ccggccacga tcaccaagtc
      601 cccgccttgc agcccagagg tcatgcggtc gaggtcgata aagccagttg gaatacccgt
      661 gacatccgaa tccccctcgc ggtgatagag ctcatcgatt cgctcaacga cttgcgcaag
      721 tagtggctga atttcctgaa agccctgcgc gctacgcgcg ccctcttgcg cgatcttaaa
      781 aacccgtgac tcagcttcat caagcagttg ccgggcttcc ttaccctgcg ggttaagcgc
      841 agtagcggca atatcgtcag ccactgccac cagctttcta agcatggatc gctcgcgcac
      901 gatctcggcg tagcgacgga tgtttgctgc cgaaggcgtg ttgtgagcca gcgcattgag
      961 ataacttaag ccaccaactt cctcggcttt gccagcgctc gtgagcgact cgttaacggt
     1021 aatgacgtca gccggacgag acaagttgat cagccgagca atgtgttgcc agatcaaacg
     1081 atggtcgtgg cgataaaaat caccatcgct caacaagtcg gttaatcgtt catacgcggc
     1141 attatcaagc aacagaccac ctagtaccga ttgctcggct tcgatggaat gtggtggcac
     1201 acgcagatac tgcagatcgg attcaggcgg ttgattcata cggtcatcat atagccaatt
     1261 cgggagatag gcaccaccag cctatagggc tggtgtagac cttatttcgg aaatcccaaa
     1321 cgaaatggca cagcgttgct gtgccatttc agtgccgtca caggtaggtc atcgaagggc
     1381 tatcagggac gttgaactcg tgcaagacga gcgacccaaa agcaacccct gacaacccag
     1441 agtaaaactt aaaccaattc gccttcgact ttcacggtga cgtctgaaac cacgtcagga
     1501 tgcaaagcca cctgaatctg atactcaccg acggccttga ttgcaccatc attcatga
//
LOCUS       DATBNL010000561         2209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_66730, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000561 DATBNL010000000
VERSION     DATBNL010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66730"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VIC30_09690"
     CDS             <1..335
                     /locus_tag="VIC30_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804687.1"
                     /translation="ADERAIWPNVPLMIPLPGATTFGEVNRECLRHAGAELGIDQAIA
                     DREIDTLVRKLSSELDAVISDIEVKNPSLPGAGGLRQASDLRLLSAIKHIVIKDMLKR
                     IEPKTAPQ"
     gene            complement(316..2004)
                     /gene="aspT"
                     /locus_tag="VIC30_09695"
     CDS             complement(316..2004)
                     /gene="aspT"
                     /locus_tag="VIC30_09695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0070906 - aspartate:alanine antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-alanine antiporter"
                     /protein_id="HEY7804688.1"
                     /translation="MDALLDAFRENPEVAIFLSIALGTMIGKIKFGKFHFGTVAGSLM
                     MGLIIGQIGIEVPPMLKAVFFALFIYAVGFKSGPGFFGSLNKETLKLVLLSVILCVTG
                     LLCILVVNYFLDFDAGFSAGLGAGALTDTAMMGTASSAMKELNISSAELSQLNSHMAI
                     AYAITYIFGTVGLIIFVSSVAPLLLKINLKESARELEAELAGKGQGSNDKDVHPYSAM
                     VSRAHRVEQDSPAIGKMVCEIEAHFPRMSIERVIRDEQIIERDPDLRIKAGDIVAVVS
                     RRELVTDMDEQFGPEVDSPQALSFPRKTVHVVLDKREYVGKTIGEIRRSTGPISHHGL
                     FLNRITHRGFTMTPNDYTLYRFGDVAEVSGRPSSVDKLAREFGRVKNEAHKSDIAIHT
                     LAIVLGTLLGLITGHIGIVPIELGVGGGILVVGLIVGWAHSRYPGVGDMPPAAQWAFS
                     ELGLTAFAAVVGLMAGPRAIAAMQEHGLAILGAGVLVTLIPPIVAFYAGQYLLKIHPL
                     ILLGGIAGAQTEAASMNTIIEESESQTPVIGFTVCYAISNVLFAVWGPIIVALS"
BASE COUNT          535 a          589 c          592 g          493 t
ORIGIN      
        1 atgctgacga acgtgccatt tggccgaatg tacccttgat gattcctttg ccgggtgcga
       61 caacgtttgg cgaggttaac cgtgaatgcc tgcgtcatgc tggtgctgag ttaggcatcg
      121 atcaagcaat cgccgatcga gagattgaca cgctggtgcg caagttgtcg tccgagctag
      181 acgctgtgat cagcgatata gaggtaaaaa atccttcact gcctggcgct ggaggtctca
      241 ggcaagcaag cgacctgcgc ctgctctcgg cgatcaaaca tatcgtgatc aaggacatgc
      301 tcaaacgcat tgagcctaag acagcgccac aatgatcgga ccccacacag caaatagcac
      361 attggagatc gcgtagcaga ccgtaaagcc aatcacaggt gtttggcttt ccgactcttc
      421 aatgatggtg ttcatggagg cggcttcggt ctgagcgccg gcaatcccac cgagcagaat
      481 caacggatgt atcttcaaga ggtattggcc ggcgtaaaaa gcgacaatcg gcggtatcaa
      541 ggtcaccagc acaccggccc ctaagatggc cagaccatgt tcttgcatcg cagctatcgc
      601 tctagggcct gccatcaaac caaccacggc ggcaaatgcg gtgagaccta gctctgagaa
      661 agcccattgc gccgcaggcg gcatgtcacc cacgccggga tatcgagagt gcgcccaacc
      721 gacaatcaag cccaccacca gaatgccgcc accgacaccg agctcgatgg gcacgatgcc
      781 gatatggccg gtgattaagc caagcaaggt acccagcaca atggccagtg tgtgaattgc
      841 gatgtcgctt ttgtgggcct cgttcttaac ccggccaaac tcacgagcca gcttatcgac
      901 cgaggagggg cggcccgaga cttcagctac atcaccaaat cgatataacg tgtaatcgtt
      961 cggtgtcatg gtgaaaccac ggtgcgtgat ccggttcaga aacaggccgt gatggctaat
     1021 agggcctgtc gatcgtctga tctcaccaat ggttttaccg acatactcgc gcttatcgag
     1081 caccacatgg acggttttac gaggaaatga caaagcttga gggctgtcga cttcgggccc
     1141 gaattgctcg tccatgtctg tgactagctc acggcgcgag accacggcga cgatgtcgcc
     1201 ggctttgatc cgtaaatccg ggtcccgctc aatgatttgc tcatcgcgaa tgacccgctc
     1261 aatactcatg cgcggaaagt gtgcttcgat ttcacaaacc atctttccta tggcgggtga
     1321 gtcttgctcg acgcggtgcg ctctgctcac catggcgctg tagggatgga catccttgtc
     1381 gttgctgcct tgacctttac cggcgagctc agcctcaagt tcgcgggcgg attctttgag
     1441 gttgatcttc aacagcaatg gcgcgactga gctgacaaag ataatcagac ccacggtacc
     1501 gaaaatatag gtgatcgcgt aggcaatggc catgtgactg ttaagttgac tgagttcggc
     1561 tgagctgatg ttgagttctt tcatcgcgct cgaggccgtg cccatcatcg ccgtgtcagt
     1621 tagcgcaccc gcacctagcc cagcagaaaa cccagcgtcg aaatccagga agtaattgac
     1681 cactaggatg cataacaggc cggttacaca taggatgact gagagcaaca ccagtttgag
     1741 cgtttcttta ttcagactcc caaaaaatcc cggtccgctt ttaaaaccca ccgcataaat
     1801 gaacagcgca aagaacacgg ccttgagcat cggcggcact tcaatgccaa tttggccgat
     1861 gatcaggccc atcatgagcg agcctgccac ggtaccaaag tggaatttgc cgaacttgat
     1921 tttgccgatc attgtgccga gtgcgatcga cagaaagatc gctacttcgg ggttttctcg
     1981 aaaggcatcg agcaaggcat ccatggtgac ggttccgtgt ttgggtgttt ggtgaatgag
     2041 taggagcgat cgtaactaaa taattttgca ggtttcccac atgtggtttg ttaacccggc
     2101 taagcgcgtg tgtcaatgcg cggacacgaa aaatcgatag tgttaacaac ggttcagggc
     2161 taatcccgta ccggattgat ccggtttcct ttatattctc acgattgga
//
LOCUS       DATBNL010000562         3968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_26716, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000562 DATBNL010000000
VERSION     DATBNL010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26716"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VIC30_09700"
     CDS             complement(<1..331)
                     /locus_tag="VIC30_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY7804689.1"
                     /translation="MNPNEHKLAYPLNDTLPLPGHSIEVAKGVHWIRMPLPFALDHIN
                     LWLLKDTIDGQAGWTIIDCGISRDEVKTLWESIFTNELGGLPVLRVIVTHMHPDHVGL
                     AYWLCQRW"
     gene            450..2270
                     /gene="aceK"
                     /locus_tag="VIC30_09705"
     CDS             450..2270
                     /gene="aceK"
                     /locus_tag="VIC30_09705"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008772 - [isocitrate dehydrogenase
                     (NADP+)] kinase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HEY7804690.1"
                     /translation="MQTSDTVVVEPKPVQLDPAEVAQMILTGFDRHYALFRYGAQRAK
                     SLFESGDWLGIQKLSRERIEYYDRRVRECLAKLNPVLARQAGSQDPVMSIEQRQFWQA
                     VRQSYVTLLADHQQPECAETFYNSVTCRALHRDYFHNDFLFVRPAVATDYLDSKRPVY
                     RVYYPSSRGLKRSLTQMFADFGLACGFDDLPRDVRLLARAGARELAKRIARTSGHRLA
                     SDCQLHVLGSLFFRNKTAYVVGRMINEGTTYPFVIPLVRNVAGQVVVDALLAEEADLS
                     TIFSFTRAYFLVDMEVPAAYVEFVASLIPRKAKAEIYTMVGLQKQGKTLFYRDFLQHL
                     AHSDDQFDLAPGIPGLVMSVFTLPSYPYVFKLIKDKISKDGMTPATVRSKYQMVKLHD
                     RIGRMADTWEYSQVALPRARFSPALIAELERVAPTQIELRGDLLVLKHLYIERRMTPL
                     NIYLVDAPQALRHRAIVDYGDAIKELAAANIFPGDMLYKNFGVTRLGRVVFYDYDEIQ
                     PMTEMNFRAIPPAPNEEAEMASEPWYAIGPNDVFPEEFATFLLGNPEIRKVFRQSHTD
                     LLEPQWWQTCREQVARGVLQDPRPYPNKQRLSPQADGLPD"
     gene            complement(2239..3150)
                     /locus_tag="VIC30_09710"
     CDS             complement(2239..3150)
                     /locus_tag="VIC30_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003277048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEY7804691.1"
                     /translation="MNARLSIEHTTQYAYDHDVILAQHLAYLRLQSTPWQKVLQHALI
                     VTPEPSHLDEQIDAFGNHRSYFSLTQPHRALTVHSTSAVEKTPRYDQFNTGATQPWEL
                     VRNAMVYSLEQPFVPASEFVWPSPYVAWHESLKNYALTAFTPGRPLGEASLALCQQIY
                     NDFTYESGSTQIHTPIEVAFNARKGVCQDFAHIMIGCLRTLGLAARYVSGYLLTTPPA
                     GQPRLRGADASHAWVSVYCPEAPGHWLELDPTNATLADIDHVCIAQGRDFGDVSPLRG
                     IIRGGGQHRLEIAVTVEPSQANHQPVG"
     gene            complement(3147..>3968)
                     /locus_tag="VIC30_09715"
     CDS             complement(3147..>3968)
                     /locus_tag="VIC30_09715"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEY7804692.1"
                     /translation="FSLLSADQSTSMSTVNDTITELARRQNLVPYDSPDISSSSLAFA
                     RSLINRMREPGNGALPDVVQSLQFAMQAVRDRLPPEHVEIPGKIRALLQREQSEHDLL
                     NVLDKIELPLAALVGFQLDRMTKDLGWRLLAAGRLLERLINQSQIMTQFFDSTAVYTG
                     QGFDSLLTLFDSGITYRTRYQRQQDIPALMNLIVLDRTNPRAIETTVAGLRDHLSYLP
                     GSKAIVSSLTDLNWSTDHNTDLLTEVRTLTQKGFQLSNDISHQFFLHVTEQRFTS"
BASE COUNT          915 a          966 c         1096 g          991 t
ORIGIN      
        1 cccagcgctg acacagccaa tatgccagac ccacatgatc agggtgcatg tgcgtcacaa
       61 ttacccgcaa aacgggcaga ccgccaagtt cgttggtaaa aatagactcc caaagcgttt
      121 tgacttcatc gcgactgatg ccgcagtcga tgatggtcca accagcttga ccgtcaatgg
      181 tgtcttttag tagccagagg ttgatatgat cgagggcaaa gggtaatggc attcttatcc
      241 aatgaacgcc cttggctact tcgatactgt gtcccggcaa aggcagcgtg tcgttcaaag
      301 ggtaggctag tttgtgttca tttgggttca tgttgactgt ctcaatttag acgtgccagt
      361 ggggtgccat cggcattggt ttttaacttt agtccatcat aagtcgagaa acgacccgtc
      421 gcgaacttgt ttggagtggt gaaactgcaa tgcaaacatc tgatacggtt gttgtggagc
      481 ccaaaccggt tcaattagat cctgccgagg tagcgcagat gattctcact gggtttgatc
      541 gtcactatgc gctgtttcgc tatggtgcgc agcgcgcaaa gtcattattt gagtctggcg
      601 actggttagg catccagaaa ctctcgcgcg agcgcatcga gtattacgat cggcgagtgc
      661 gtgaatgttt ggccaaactc aacccggttc ttgcacgcca ggccggcagc caagaccctg
      721 tcatgagcat agagcaacgg cagttctggc aggctgttcg acagagttat gtcacgctgc
      781 ttgccgacca tcagcaacca gagtgcgctg aaacctttta caactcagtg acctgccggg
      841 cattgcatcg agattatttt cataatgatt ttttgtttgt gcgcccggcc gttgcaactg
      901 attacctcga cagtaaacga cctgtctatc gtgtttatta cccgagttca agaggtctta
      961 agcgcagctt gacacaaatg tttgccgact tcggcttggc gtgtggattt gacgatctac
     1021 cacgagatgt tcgcttgttg gccagggctg gcgcacgtga attggccaag cggattgcac
     1081 gcaccagtgg ccatcgcctg gcaagcgatt gtcaattgca tgtgcttggc agcttgttct
     1141 ttagaaataa aactgcctat gtggttgggc ggatgatcaa cgaaggtaca acttacccct
     1201 ttgtcatccc gctcgtgcgt aacgtggccg gccaggtcgt cgttgatgcg ttgctggccg
     1261 aagaggctga tctaagcact attttcagct tcacacgcgc ttacttttta gtggacatgg
     1321 aagtgccagc ggcttacgtt gagtttgttg cttcactcat accgcgtaag gccaaggcgg
     1381 aaatctacac catggttggt ctgcaaaaac aaggtaaaac gctcttctat cgagactttt
     1441 tgcaacactt ggcacattct gacgatcagt ttgatttggc accaggcatc cccggactgg
     1501 tcatgagtgt gttcacctta ccttcgtatc cgtatgtgtt caaactcatt aaggacaaaa
     1561 tttccaagga cggtatgaca ccggccaccg tgcgatcaaa gtaccagatg gttaagttgc
     1621 acgatcgcat tggtaggatg gctgacacct gggaatattc acaagtggcg ctgcctagag
     1681 cgaggttttc cccggcgctg atagcagagc tcgagcgtgt agcgcccacg caaattgagt
     1741 tgcgtgggga tttgctggtg ttaaagcatt tgtatattga acgacgcatg acaccgctga
     1801 acatttacct tgttgatgcg ccgcaggctc ttcgtcatcg agcgatcgtc gattatggtg
     1861 atgccataaa agagctcgca gctgcgaata tttttccggg tgacatgctc tataagaact
     1921 ttggcgtgac tcgattaggt cgtgtcgtgt tttatgacta tgacgaaatt caaccgatga
     1981 ccgaaatgaa ttttcgggcg ataccgccag cacccaacga agaggcggaa atggccagcg
     2041 aaccttggta tgccatcggc cccaatgatg tgtttccgga agagttcgcc acgtttttac
     2101 ttggtaatcc ggaaatcaga aaggtgtttc gccaatcgca taccgacttg ctcgagccgc
     2161 agtggtggca aacctgtcgt gagcaagtcg cgcgcggggt gttgcaagat cctcgccctt
     2221 atcctaataa acagcgcctt agcccacagg ctgatggttt gcctgactag gctctacagt
     2281 cacagcaatc tccagccggt gttgacctcc gccgcgaatg atgccacgca gcggtgacac
     2341 atcgccgaag tccctgcctt gtgcgataca gacatggtcg atatcggcta gtgttgcatt
     2401 ggtgggatca agctcaagcc aatggcctgg ggcctctggg cagtacacac tgacccaggc
     2461 atgagaggca tctgcaccac gcaacctggg ctgacctgct ggtggagtcg tcaataagta
     2521 gccgctgacg taacgggctg ccaatccaag tgtgcgcaga catccaatca tgatgtgcgc
     2581 gaagtcttga cagacgcctt tgcgcgcatt gaaagccact tcaattggcg tgtgaatctg
     2641 cgtagaacca ctttcgtagg tgaagtcgtt atagatttgc tggcatagtg ccaagcttgc
     2701 ttccccaagg ggacggcccg gcgtaaaggc cgtgagtgca taattcttta aagactcatg
     2761 ccacgccaca taagggcttg gccagacaaa ctccgaggcc ggcacaaaag gttgctctag
     2821 ggaataaacc atggcgttac gaaccaactc ccaaggttgt gttgcaccgg tgttgaactg
     2881 gtcgtagcga ggcgtcttct cgacagcgct ggtgctgtga acggtaagag cgcgatgtgg
     2941 ttgagttagc gagaagtaac tgcgatgatt tccaaacgcg tcgatctgct cgtcaaggtg
     3001 actcggttcg ggggtcacga tcagtgcgtg ttgcagtact ttttgccaag gcgtcgattg
     3061 caagcgcagg taggctaagt gttgcgccag gatgacatcg tggtcgtatg catattgcgt
     3121 ggtgtgttcg atgctcaggc gcgcattcat gacgtgaacc gttgttctgt gacatgcaaa
     3181 aagaactggt gactgatgtc gttagataat tgaaagccct tttgggtcag cgttctaacc
     3241 tcggtcaaaa gatccgtatt gtgatcggtg gaccagttca gatcggtcaa ggaacttacg
     3301 atggctttgc tgcccggtaa gtacgacaga tggtcacgca agcccgcgac cgttgtctcg
     3361 atagcgcgcg ggtttgtacg gtccaaaacg atcaggttca taagtgccgg tatgtcttgc
     3421 tgacgttgat atcgagtacg ataagtgatg ccgctgtcga acaaagtgag taatgagtca
     3481 aatccctgcc cggtatagac cgcagtggag tcaaagaact gtgtcatgat ttgtgattga
     3541 ttgatgagac gctctagcaa acgacctgcc gctagaaggc gccatcccaa gtctttggtc
     3601 atacggtcaa gctgaaagcc tacgagtgcg gccaatggaa gttctatctt gtccaagaca
     3661 tttagcaggt catgttcgga ttgctcgcgt tgcagcagcg cacggatttt gccgggtatc
     3721 tccacatgct ccggcggtag gcgatcacga acggcttgca tggcgaattg caggctttgc
     3781 accacatcgg gcagcgcccc attgcccggt tcacgcatcc gattgatcag agagcgagcg
     3841 aaagccagcg acgagcttga gatatcggga ctgtcatacg gtactaggtt ctgccgtcgt
     3901 gccaactcgg taatggtgtc gttgaccgtt gacatgctcg ttgattgatc ggcggataat
     3961 agcgagaa
//
LOCUS       DATBNL010000563         3072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_6318, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000563 DATBNL010000000
VERSION     DATBNL010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6318"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VIC30_09720"
     CDS             <1..380
                     /locus_tag="VIC30_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7804693.1"
                     /translation="MKYLERVRIPEQANKYPGQLSGGQQQRVAIARSLCMSPKIMLFD
                     EPTSALDPEMVKEVLDVMVELAEETGMTMLCVTHEMGFARKVANRVIFMDQGEIIEQN
                     KPEEFFGNPQSERTKLFLGQILH"
     gene            513..701
                     /locus_tag="VIC30_09725"
     CDS             513..701
                     /locus_tag="VIC30_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEY7804694.1"
                     /translation="MAEHYESEITRFLKDYKKAHPDVEQRQRDGRARLWERQQDPELA
                     EAFKQSKVPQRPYVYQND"
     gene            705..1577
                     /locus_tag="VIC30_09730"
     CDS             705..1577
                     /locus_tag="VIC30_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006228004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEY7804695.1"
                     /translation="MQQSGTNDGTLAALVTPDVDSTPDVIDSVAIARLYGEPLFNLPQ
                     DLYIPPDALEVFLETFEGPLDLLLYLIRKQNFNVLDIPMAEVTVQYLSYVEQIRATNL
                     ELAGEYLLMAAMLIEIKARMLLPVKPRDDGQEPEDPRAELVRRLLEYEQMKLASQKLD
                     DLPRVGRDFFPAHAVADFEVEKVLPSVDLSDLQAAWRDIIRRAKLNAHHHITREQLSV
                     REHMTHILRHLSDVKFVEFGDLFLSRIEQGAPVAVVVVHFLALLELARESLLDITQAE
                     PYAPIYVRLSYSSV"
     gene            1608..2450
                     /gene="panC"
                     /locus_tag="VIC30_09735"
     CDS             1608..2450
                     /gene="panC"
                     /locus_tag="VIC30_09735"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012418686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEY7804696.1"
                     /translation="MKVVHSIEALRDQLRGQNRVAFVPTMGNLHEGHLALMRTARQHG
                     DPVVASIFVNRLQFGPNEDFDKYPRTLENDIAKLEAARDVYVLFAPDERELYPEPQTF
                     RVQPPADLGDILEGECRPGFFHGVSTVVLKLFSCVQPKVAVFGKKDYQQLMVVRAMCR
                     QFQLPVEILAHETVRADDGLALSSRNVYLSEADRHQAPALYAQLQQIRQAVAQGQHNT
                     AELEIKAIEQLSAAGWQVDYVAIRRQRDLLVPTMDEVAQGESLVVLAAAKLGATRLID
                     NLEL"
     gene            2567..2893
                     /locus_tag="VIC30_09740"
     CDS             2567..2893
                     /locus_tag="VIC30_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003802043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEY7804697.1"
                     /translation="MEKKERTRGAGFNALTLRERELLYPLTEGKANKLIAEELGLSRR
                     TIEAHRANIFHKMGVDNAVQLMRVLYSSPRLSERLIAGARGKAAKKSARKSTNRKPGP
                     PPHQAR"
     gene            complement(2853..>3072)
                     /locus_tag="VIC30_09745"
     CDS             complement(2853..>3072)
                     /locus_tag="VIC30_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804698.1"
                     /translation="QGCWRGLAMTPPQIMLLDTNGNVRAQLRMTSAEVLRLQSIDGQT
                     PNLTYTLNRQPDLDPINELDGVAVPACD"
BASE COUNT          709 a          794 c          855 g          714 t
ORIGIN      
        1 ccatgaagta tctggagcgc gtgcgcattc ccgagcaggc caacaaatat cccggtcagt
       61 tgtcaggtgg tcagcagcag cgcgtcgcga ttgcccgttc actttgtatg agccctaaga
      121 tcatgctgtt tgacgagcca acctcagcac tggaccctga aatggttaaa gaggtgctcg
      181 atgtcatggt tgagcttgct gaggaaaccg gcatgaccat gttgtgcgtg actcacgaga
      241 tggggtttgc gcgtaaggtg gctaatcggg tgatttttat ggatcagggc gaaatcatcg
      301 agcaaaacaa acccgaagaa ttttttggga atccgcagtc ggagcggacc aagctgtttc
      361 tgggtcaaat tctgcattga gtcgcccatg acgctcgcac cgtggtccgg tactggtgcg
      421 ctgccaaacc cggctgtgct gcagtagaat gaaggccaag gttgcctatt tgggtgatcg
      481 atcaagctgc aaagacagga aagtccaaag ccatggctga acactacgaa tctgaaatca
      541 cgcggtttct gaaagactat aaaaaggccc atcccgacgt tgagcaacgc caacgtgacg
      601 gtcgcgcacg tttgtgggag cgccaacagg accccgagct tgctgaagcc ttcaaacaaa
      661 gcaaagtgcc ccagcgtcct tacgtctatc aaaacgactg acggatgcag caatctggca
      721 ccaatgatgg caccctagcg gcgcttgtta ccccggatgt agattccaca cccgacgtga
      781 tcgattcggt ggccattgca cgtctgtatg gcgagccgct ttttaatctg ccgcaggact
      841 tgtacattcc gccagatgcg cttgaggtat ttctcgagac gtttgaaggt ccgcttgatt
      901 tattgctgta cctgatccgc aaacagaact tcaacgtgct cgacatcccg atggcagagg
      961 taaccgtcca atacttgtct tacgttgaac agattcgagc aaccaacctt gagttggccg
     1021 gtgagtactt gctaatggca gccatgctca ttgaaatcaa ggcgcgcatg ctcctgccgg
     1081 tcaagccacg cgacgatggc caagaaccag aggatcctcg ggcggagctt gtgcgtcgat
     1141 tgctcgagta cgagcaaatg aagcttgcct cgcagaaact cgatgacttg ccgcgcgtgg
     1201 gcagggattt tttcccggca cacgcagtgg ccgactttga agtagaaaaa gtgctgccaa
     1261 gcgttgatct ctcagattta caggccgctt ggcgtgacat tattcgccga gctaagctca
     1321 atgcacacca tcacatcaca cgtgaacagt tgtcggttcg cgaacacatg acccatatct
     1381 tgcgtcatct ctctgatgtg aagtttgtgg agttcggcga tttatttcta agccgaattg
     1441 agcaaggcgc acccgtggcg gtagtcgtgg tgcactttct ggcgctgctt gaactcgcgc
     1501 gtgagtcatt actagacatc acgcaagccg agccgtatgc gcccatctac gtgcgcctgt
     1561 cgtactcaag cgtatagttc aagcaaaggt aaagcagggg tgcgtttttg aaagtcgttc
     1621 attccatcga ggcgctgcga gatcagttgc gtggtcaaaa ccgtgtggcg tttgtaccga
     1681 ccatgggtaa cttacatgag ggccacctcg cgctcatgcg cacggcgcgc caacatggcg
     1741 atccagtggt ggctagcatt tttgttaacc gcttgcagtt cggtcccaac gaagatttcg
     1801 acaaataccc tcgaacgctt gagaacgata tcgccaagct tgaggctgcg cgtgacgtgt
     1861 acgtcttgtt cgcgcccgat gagcgcgagt tatatcctga accacaaaca tttcgagtgc
     1921 agccgcctgc tgaccttggt gacattctcg aaggtgagtg ccggcctggg ttttttcacg
     1981 gggtgagcac cgtggtgctc aaactctttt cttgcgtgca acccaaagtg gcggtgtttg
     2041 gcaaaaaaga ctatcagcag ctgatggtag tacgcgccat gtgcaggcag ttccagttac
     2101 cggttgagat tctggcgcat gaaacggtgc gtgcggatga cggcttggct ttgtcttcac
     2161 gcaacgttta cttgtctgaa gctgatcgtc atcaggcacc ggcactgtat gcacagctgc
     2221 aacagattcg ccaggcggta gcgcaaggcc aacacaacac agccgagctt gaaattaagg
     2281 ccatcgagca gctaagcgct gccggttggc aggtggatta tgtcgccatt cggcgccagc
     2341 gcgatctttt agtgcccacc atggatgaag tggcccaagg cgaatcgctg gtggtgctgg
     2401 cggctgccaa actcggcgct acacgtctga tcgacaatct agagctatag ctcaactgat
     2461 ttgtcaatcc cctcctaggg aaaccccggc tgtcagattt gacagcttac gtctttggtc
     2521 tggctctgcg agactgccat ccttttgaag ttaggaggca gttgccatgg aaaagaaaga
     2581 acgaacaagg ggtgctggct ttaatgcatt gaccttgcgc gagcgcgagt tactttatcc
     2641 attgaccgag ggtaaagcga ataaattgat tgccgaagag cttggcctat cacgacgcac
     2701 aatagaggcg catcgagcca atattttcca caagatgggt gtcgacaatg ccgtgcaact
     2761 tatgcgcgtg ctctacagca gccccagact gtctgaacgg ttgattgccg gcgctagagg
     2821 caaagccgct aaaaagtcgg ctagaaagtc gactaatcgc aagccgggac cgccacccca
     2881 tcaagctcgt tgatggggtc gagatcgggt tgccggttca acgtgtatgt caggttcggt
     2941 gtttgcccat caattgattg cagtcgtagc acttcggccg aggtcatgcg aagttgcgct
     3001 cgcacattgc cgttggtgtc tagcagcatg atttgaggtg gtgtcatcgc cagaccacgc
     3061 cagcaaccct gt
//
LOCUS       DATBNL010000564         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_46682, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000564 DATBNL010000000
VERSION     DATBNL010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46682"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VIC30_09750"
     CDS             <1..239
                     /locus_tag="VIC30_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HEY7804699.1"
                     /translation="LAGLAVTAYYMAWTQPWLRDVFFGISRAEPIALWWGIQPSAAGI
                     FGAPVALLLMVLVSLATPKPDASAQAVLAGLRRA"
     gene            complement(201..791)
                     /locus_tag="VIC30_09755"
     CDS             complement(201..791)
                     /locus_tag="VIC30_09755"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEY7804700.1"
                     /translation="MSRLKQHLGGLTEADAELLAQAYQQVIPIRGHARVTHEPARKPN
                     PNEQTLRRRANASAVNHQADNLSDGDPFTLDDPPESYRTSGVSSQALRQLKRQASGIR
                     ETMDLHGLTRDQARIALQHFVANAAARGVNRVCIIHGQGYGSRDGASVLRYLTRHWLA
                     QMSQVLAFVTPPPAAGGKGAVLVLLRTSQAGQDRLR"
     gene            complement(778..>1533)
                     /locus_tag="VIC30_09760"
     CDS             complement(778..>1533)
                     /locus_tag="VIC30_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7804701.1"
                     /translation="FQEHAERFETELIFDQIEKVDLSKRPFTLFGDGGKTYTCDALII
                     ATGASAKYLGLPSEEAFMGRGVSGCATCDGFFYRDQDVVVVGGGNTAVEEALYLSNIC
                     KTVTVVHRRDKFRAEPIMIDKLMDKAQNGNVKLAVHRELDEVLGDQSGVTGVRLRSTT
                     GESPVEMPVTGVFIAIGHSPNTGIFENQVDMENGYIVTRSGLKGLATMTSVPGVFAAG
                     DVQDHVYRQAITSAGTGCMAALDAQRWLENEPA"
BASE COUNT          298 a          419 c          463 g          353 t
ORIGIN      
        1 tgttggccgg attggcggtt accgcctatt acatggcttg gacgcaaccg tggctgcgcg
       61 atgtcttttt tgggatctcg cgcgccgaac cgattgcgtt gtggtggggc attcagccaa
      121 gcgcagcggg tatttttgga gcgccggtgg ctttgttgtt gatggtgctt gtgtcgcttg
      181 cgacacctaa accggacgct tcagcgcagg cggtcttggc cggcttgcga cgtgcgtaat
      241 agcaccaata cagcgccttt gccaccggca gctggcggcg gcgtcacaaa ggcaagcact
      301 tgcgacattt gtgccagcca gtggcgcgtt aagtaacgaa gcaccgaggc accatcgcgc
      361 gaaccgtaac cttggccatg aatgatgcac accctgttga cccctcgcgc agcagcgttt
      421 gccacaaagt gctgtaaagc aatgcgcgcc tggtctcggg ttaatccatg caagtccatg
      481 gtttcgcgaa tgccactggc ttggcgtttg agttgtcgta aggcctgact tgacaccccc
      541 gaggtgcgat aggattcggg tggatcgtca agcgtgaacg ggtcaccatc ggagaggttg
      601 tccgcttgat ggttgactgc gctggcgttg gctcgacggc gcagcgtttg ttcattggga
      661 ttcggtttgc gcgcaggctc gtgggtcacg cgagcgtgac ccctgatcgg aatgacctgt
      721 tggtaagcct gggccagcaa ctcggcgtct gcttcagtca gcccaccgag atgctgttta
      781 agccggctca ttctccagcc agcgttgtgc gtcaagcgct gccatgcagc cggtgccagc
      841 gctcgtgatg gcttgacgat agacgtggtc ttggacatcg ccggcggcaa acacgccagg
      901 cacggaggtc atggtcgcca agccttttag gccgctgcgc gtaacgatat agccgttttc
      961 catgtcgacc tgattttcaa aaataccggt gtttgggctg tgaccaatgg caatgaacac
     1021 gcctgtgaca ggcatttcaa cgggtgactc gccagtggtg ctacgcaagc gcacgccggt
     1081 gacgccgctc tgatcaccaa gcacttcatc gagttcacga tgcacggcaa gtttgacgtt
     1141 accgttttgt gctttgtcca tcagtttgtc aatcatgatg ggttcggcac ggaacttgtc
     1201 gcggcgatgc accacggtga cggtcttgca gatgttagac aaatacaggg cttcttcaac
     1261 cgcggtgttg cccccaccga cgacgacaac gtcttggtcg cggtagaaga aaccatcgca
     1321 ggtggcgcag cccgatacgc cgcgtcccat gaaagcctct tccgagggta gacccaagta
     1381 cttggctgag gcaccggtgg cgataatcag ggcatcgcag gtgtaggttt ttccgccatc
     1441 gccaaacagc gtgaagggac gcttggacaa atcgactttc tcgatttgat caaatatcag
     1501 ttcggtctca aagcgctcgg catgttcctg aaa
//
LOCUS       DATBNL010000565         1545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_146593, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000565 DATBNL010000000
VERSION     DATBNL010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146593"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1433
                     /locus_tag="VIC30_09765"
     CDS             <1..1433
                     /locus_tag="VIC30_09765"
                     /inference="COORDINATES: protein motif:HMM:NF014871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4214 domain-containing protein"
                     /protein_id="HEY7804702.1"
                     /translation="KQLADAVDGIIGEKIDNVAGYTDVYLNGARDSVRNQETNLGDLT
                     ADANLVAVRDHIAQTMPELSSVPLVSLKNGGGIRADIGLALGTSGPEAPVGGVVSQLD
                     IETSLAFNNGLALVETDAAGLVSLLEHGLATAGTTSGRFPQIGGLALSYDTDRPEGDR
                     IVSLQIDGVNGQAGTPIVVDGQLVAEPDMAVNIATLDFLALNDGDGYAFSEVASQITP
                     LVQSEDKTFDTPLAEQNALYQYLKSNHGSQSTAFDQTDVGPAQDTRLQNLEDRQDSVF
                     DDQLSAVQTSDILSGGLGVDTVVIDGNQADYIVARDEATTIVTPADQSAQAVTWVNVE
                     RLVFNDGVVDLDYSTAQSQIATLYDKVLDRQADLNGFQFWANGSSDGVNIGEIAMGFF
                     SSQEYVDLTGHRVDTASLDQNLETLYQTLLGRSADDQGSAYWQDVINQGLTTLAGVAD
                     AMLDPTTLQAETGAGPATASQWDFFI"
BASE COUNT          352 a          441 c          442 g          310 t
ORIGIN      
        1 tcaaacaact ggccgatgcc gtagacggca tcatcggtga aaaaattgac aacgttgccg
       61 gctataccga tgtgtacctc aatggcgcgc gcgacagcgt gcgtaaccaa gagactaacc
      121 tcggtgacct gactgccgac gctaacctgg tcgccgtgcg tgatcacatt gcccaaacca
      181 tgcctgagct aagcagcgtg ccgctggtga gcttgaaaaa cggtggtggc attcgcgccg
      241 acatcgggtt ggcgcttggc acatctggcc ccgaggcacc ggtgggcggc gtggtgagcc
      301 aactcgacat cgaaacgtca ctggcgttta acaacggctt ggcactggtc gagactgacg
      361 ctgctggctt ggtgagcttg cttgaacacg gcctggccac ggccggcacc accagcggtc
      421 ggtttccgca gatcgggggg cttgctttaa gttatgacac cgaccgtcca gagggcgatc
      481 gcatcgtgtc actgcagatt gacggggtca acgggcaagc tggcaccccc atcgtggtcg
      541 atggacagct ggttgctgaa cccgacatgg cagtcaatat tgccaccttg gacttcctgg
      601 cactcaatga cggtgatggc tacgcctttt ctgaagtcgc cagccagatc acgccactgg
      661 tgcaatcaga ggataaaacc ttcgacaccc cactggccga acaaaatgcg ctctaccagt
      721 acctgaagtc caaccatggt tcgcagtcaa ccgcgtttga tcagaccgat gtcggtccag
      781 cacaagacac gcgcctgcaa aacctcgaag atcgtcagga cagcgtcttt gatgatcaac
      841 tcagtgctgt gcaaaccagt gacattctca gtggtggact gggcgtggac acggtggtca
      901 ttgatggtaa tcaggctgac tacatcgtcg cgcgcgatga agcgacaaca atcgttaccc
      961 cggctgatca gagcgcccaa gccgtcactt gggtcaacgt cgagcggttg gtatttaatg
     1021 acggtgtagt ggatttggat tacagcaccg cacaaagcca aatcgcaaca ctgtatgaca
     1081 aggtgcttga tcgtcaggct gacctaaacg gattccagtt ctgggccaac ggcagcagcg
     1141 acggtgtgaa catcggtgaa attgccatgg gctttttcag ctcacaggaa tacgtcgatc
     1201 tgacaggcca tcgggttgat actgcctcac tcgatcagaa ccttgaaacc ctctaccaga
     1261 cgttgcttgg gcgcagcgcc gacgaccaag gtagtgccta ttggcaagat gtgatcaacc
     1321 aggggttgac cacgctagcc ggtgtagcgg atgccatgtt ggacccgaca acgctacaag
     1381 ccgaaaccgg cgccgggccc gcgaccgcta gccagtggga cttctttatt taaaccagga
     1441 ctgacttgcc aacccccgag aggtgccagg cgccgatcgg gggttttttt tgcctgcctg
     1501 atcctgacag gtggtatcac gcccgggaaa ccacaccgag cccgc
//
LOCUS       DATBNL010000566         2630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_66794, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000566 DATBNL010000000
VERSION     DATBNL010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66794"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VIC30_09770"
     CDS             <1..347
                     /locus_tag="VIC30_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEY7804703.1"
                     /translation="PQDTDKYGIVSTTAIDERTDKVHAIVEKPAPDVAPSTLAVVGRY
                     VLDAAIFNHLRRTQAGSGGEIQLTDGIAAMLQEKPVFAHRYEGTRYDCGNKAGMFAAT
                     VAYGKKYHGLEP"
     gene            complement(388..1119)
                     /locus_tag="VIC30_09775"
     CDS             complement(388..1119)
                     /locus_tag="VIC30_09775"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7804704.1"
                     /translation="MFDPFGDFGEVGYLRNSLREWDLVIVKRIEHELFRAQLGKAISY
                     LAELSDIAYADFLKVHEILFSELYPWAGQDRSVLTPDTAVRKGEVIFCSPMDCRRAVD
                     YALRLGQNPNEMRGRPGQVMGLFAFGHPFLDGNGRAMLVVHSELCFRANFSIRREDTD
                     KQQYLAALSKEIANPNDGVLDSYLSTYLAPSLERQEWQNTMHELRGLSGVDVVQDTSA
                     PYDQPETRAAYLEFERKRAYRIPSS"
     gene            1669..>2630
                     /locus_tag="VIC30_09780"
     CDS             1669..>2630
                     /locus_tag="VIC30_09780"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7804705.1"
                     /translation="MIACVASAVCQFFGGYIILIRRILTVFDTILVIMTLIRKAFKFR
                     LNPTTEQTQQMVEFAGANRFVWNKALALNLARLENKQPLLWYFELVYWLGLWKQSEEY
                     AFLKAVHSQPLQQTLKDLSRAFSDAFDKTQPLKRIPRFKKKGAGDGTAGGVGGARDSF
                     RYPQGCKLDEKANRVYLPKIGWVKYRNSRQVIGDIKNLTVSRKGGHWYVSIQTEYEAQ
                     TAPHPSTSIVAIDLGVNRFATLSDGSYIEPLNIFKQLQEKLAFAQRRLSKKVKFSANW
                     KKQKKKIARLYERIANARHDFLHKASTLISKNHAMVVVEDLKVS"
BASE COUNT          678 a          690 c          640 g          622 t
ORIGIN      
        1 ccccacaaga caccgacaag tacggcattg tgtcaaccac agccatcgat gaacgcaccg
       61 acaaagtgca cgccatcgtt gagaaacctg caccggatgt ggcgccatca acgcttgccg
      121 ttgtgggccg ttacgtgctc gacgcagcga tttttaatca cctcagacgc acacaagcag
      181 gctcaggtgg tgagattcag ctcactgacg gcattgccgc catgttgcaa gaaaagccag
      241 tatttgcaca ccgctacgaa ggcacccgct atgactgcgg caacaaagct gggatgtttg
      301 ccgccacggt ggcgtacggc aaaaagtatc acgggctaga gccttaactg agacgaggca
      361 aaagcgtcaa tgctgcgcgc ttgcagctta ggatgacgga attcgatagg ctctcttacg
      421 ctcaaactca agatacgctg ctcgagtctc gggctgatca tatggcgcac ttgtatcttg
      481 aaccacatct acgccagaca aacctcgcaa ctcgtgcatc gtgttttgcc attcttgcct
      541 ttctagagac ggcgccagat aagtactgag gtagctgtcc aagaccccgt cattaggatt
      601 tgcaatttcc ttgctcagag cagccaaata ttgctgtttg tccgtatctt cccgtcgtat
      661 cgaaaagtta gcccgaaaac aaagctcgga atgaaccact agcatcgctc gaccgttacc
      721 atcaagaaat gggtggccaa aagcaaaaag ccccatgacc tgacctggac gccctctcat
      781 ttcgttcgga ttctgaccca accttaacgc gtaatccacg gctctgcgac aatccatggg
      841 actacaaaaa atcacctcgc cctttctaac cgctgtatcg ggcgtaagaa cagagcggtc
      901 ttggccagcc caaggataca gctctgaaaa aagaatctca tgtaccttaa gaaaatcggc
      961 ataagcaata tcgcttaact cagcgagata acttatggct tttccaagct gcgccctaaa
     1021 aagctcatgc tcgatacgct ttacgatcac taagtcccac tctcgaagcg agtttcgcaa
     1081 atatcctact tcaccgaagt caccgaaagg atcaaacaca cttgagttct ctttgatgag
     1141 ccgcaataag cctaaccatg tctctggccg caagcttgcc ttctcgagtg agcgccacta
     1201 gtagattctc ggtgatgtcg cttttggggt cgtcgccagc tagccttgtg acggactccg
     1261 cccaacaatc catgtacgtt ctgcggtatg tcactcggtt caaacgcgcc aacgtgttga
     1321 cgaaacgtgc gatggaggtg ctggaccgac atgactgcct tttaatgcga ttgtgcagtc
     1381 tcagtcgttg cacttgagag gtgcccgccg aagacacctt gggtgtgcgg ttaaatagaa
     1441 acgtgtcgct attgatttcc tgaagataac ctcgttgcat caagctaccc ataacgtcat
     1501 cgattttttg ggatttcgct agtctatgca gctcgtctcg cagatatacc ttgccgtcac
     1561 cagcacgcaa agcacataag agttttgagg ttactcgcat gtgcaaatta tactaccgac
     1621 atgcaattac cgttcagcgc gtaaagcccc gttcttcagg acggggatgt gatcgcgtgc
     1681 gtagccagtg cagtgtgtca gttttttggg ggttatatca tcctgatccg ccgtatctta
     1741 actgtctttg atacaatcct tgtcattatg acattgattc gcaaggcctt taaattcagg
     1801 ctaaatccca ccacagagca gacgcaacag atggttgagt tcgccggtgc caaccgcttt
     1861 gtttggaata aggccctagc gttgaacctg gctcgccttg agaacaagca accactgctc
     1921 tggtactttg agttggtcta ttggcttgga ctatggaagc agtccgagga gtatgcattc
     1981 ttgaaagccg tgcactccca gccgttgcag caaaccctca aagacttgtc acgcgcgttt
     2041 agcgatgcct ttgataaaac acagccgctc aagcggatcc cgcgatttaa gaagaaaggt
     2101 gcgggtgatg gcactgctgg tggtgtgggc ggtgcgcgcg atagttttcg ctacccgcaa
     2161 ggttgcaagc tcgatgagaa agccaatcgg gtgtatctac ccaagattgg ctgggtcaag
     2221 tatcgcaaca gccgacaggt gatcggtgac atcaagaacc tgacggtgag ccgcaaaggc
     2281 gggcactggt acgtgtcgat tcaaaccgag tatgaggcgc aaactgctcc tcacccatca
     2341 acctcaatcg tcgccatcga cttgggcgtg aatcgctttg cgaccctgtc tgacggttcg
     2401 tacatagaac cattaaatat tttcaagcag ttgcaagaga agttagcttt tgcgcaacgt
     2461 cggttgagca aaaaagtgaa gttctctgcc aattggaaaa agcagaaaaa gaagatagcg
     2521 cgtttgtatg aacgcatcgc caacgcgaga catgatttct tgcacaaagc ctcaacactg
     2581 atcagcaaaa accacgccat ggttgttgtt gaggacttga aggtcagcaa
//
LOCUS       DATBNL010000567         5078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_116190, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000567 DATBNL010000000
VERSION     DATBNL010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5078
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116190"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VIC30_09785"
     CDS             <1..290
                     /locus_tag="VIC30_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA family protein"
                     /protein_id="HEY7804706.1"
                     /translation="SLAKVTSESGWFNAGRTIAQMHAAGIWHADLNVHNILLDAQDQA
                     WLIDFDRAKEGVTDSKQLQGNLSRLLRSVNKVCPELGQRLWPVLCDGYAYG"
     gene            452..1546
                     /locus_tag="VIC30_09790"
     CDS             452..1546
                     /locus_tag="VIC30_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY7804707.1"
                     /translation="MVARLLSVVVAGTLGWMGVASAQDEQVNIYNWAEYTAEDTIPGF
                     ERQSGKTVQYDTYDSNDTLQAKLLTGSSGYDIVVPSTHYAKRQIEAGLFQKLDKSKIP
                     TWNNLDPAIMELLTPVDPNNEYLVPWGYGTNALGFNVTKAQEILGPDAKLNDWSLLFD
                     PEKAKQFQSCGISVLDEAAQVFPAALHYLGKDPNSSNPEDYRAALELLQQVRPYIRQF
                     SSSGYIDELASGDLCLVYGYSGDVLIAGDRAEQAGRDYKIDFFLPDDGAPAWFDTMAV
                     PADAPNPEGAFEFISYFNEPQVSADITNEMFYPNANQAARALVKPSVANNEAIYPPPE
                     VAKNLFVIEAQPLDIQRLQTRLWSELKSGR"
     gene            1553..2686
                     /gene="potA"
                     /locus_tag="VIC30_09795"
     CDS             1553..2686
                     /gene="potA"
                     /locus_tag="VIC30_09795"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEY7804708.1"
                     /translation="MTQVGTGSLSGFSGDAQAFLKLNDLTKVFGETVAVQSVNLTINR
                     NEIFALLGSSGCGKSTLLRMLAGFETVSSGSIYLDGEDITALAPYERPVNMMFQSYAL
                     FPHMSVEANVGFGLKQEGVARHEIHERVYEALELVQMSPYAKRKPHQLSGGQQQRVAL
                     ARSLVKRPKLLLLDEPMSALDKQIRHNTQIELVRILDQLGVTCFMVTHDQEEAMTMAN
                     RLAVMTEGQIEQVGTPQEVYAFPNSRFVAGFIGTTNLFEGVISVDEPDHVMIESEDLQ
                     RPFYVDHGVSEPLGMTVSVSLRPEQIRVARQAPDQPHNWGHGMVSHMAWMGSYALYQI
                     RLDSGKVIEASMPSQVLMDTEPPGVDEEVYVSWGRDSVTVLSA"
     gene            2683..3603
                     /locus_tag="VIC30_09800"
     CDS             2683..3603
                     /locus_tag="VIC30_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017685678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY7804709.1"
                     /translation="MIGARIKRINRRSTQLWSVLPPYAWLVLFLLVPFVLVFKISLAD
                     LRFGIPPYTPLTSIKDQAIELTVHLRGYALLFSDSLYISTYISSLKMAAVTTFWCILI
                     GYPMAYYIARSPDSIRNVLLLAVILPFWTSLLLRVYAWVGILRSDGLLNGVLMSLGVI
                     DAPLEIYRTDWAVYIGLVYAYLPFFILPAYANLVKLDARLLDAAYDLGAKPWRAFLAI
                     TLPLSMPGIIAGAMLVFIPAVGEYVIPELLGGADTLMMGRIMWTEFFTNADWPMASAV
                     TVIMVLLLLIPMIIFQVNQKQRYEAERGGA"
     gene            3600..4430
                     /locus_tag="VIC30_09805"
     CDS             3600..4430
                     /locus_tag="VIC30_09805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY7804710.1"
                     /translation="MSWLKRRAPNDPSPLGRVIALGIGFFFLYVPIATLMVFSFNDSP
                     IMTSWSGFSWRWYEALVSDRALLNAAWLSFQVAVMTATAASVIGTWAGYVLARKGSFK
                     GFSLFVGLVSAPLVIPEVVLGISLLLLFVEMDSLFGWPGGRGLFTIWVGHTTFCMAFV
                     TVIVQSRIRDLDRSLEEAALDLGATPLRVFFSVTLPLIAPAITAGWLLAFTLSLDDVV
                     IASFLSGPGSTLLSPEIFSRVRLGLKPEVNALATIFVVVVAVVVVALNLLQRRQLKGK
                     "
     gene            4427..4783
                     /locus_tag="VIC30_09810"
     CDS             4427..4783
                     /locus_tag="VIC30_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HEY7804711.1"
                     /translation="MMRLYGLKKCSTCQKAINWLKEQSVHHEFVDYRDEPIEPKDLKQ
                     YAEHLGGWEKLVNRASMTWRKLADHEREVHDDEQWQALIAQYPSLVRRPLAVHSDGSV
                     TTGFNEKRFKEKLEKS"
     gene            4780..>5078
                     /locus_tag="VIC30_09815"
     CDS             4780..>5078
                     /locus_tag="VIC30_09815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804712.1"
                     /translation="MTAVVSFEAWLTDPRTLPWLVMACLAVLVLLLLLLLVVGRRTKA
                     LSQQAESDKLGRVLDNLERFEQAWRKELADSQRQLRTELADAQRALRVELAGADE"
BASE COUNT         1044 a         1265 c         1474 g         1295 t
ORIGIN      
        1 gtagtttggc caaggtcacc agcgaatcag gctggtttaa cgctgggcgc acgattgcgc
       61 agatgcatgc cgcgggtatc tggcacgccg atttgaacgt gcataacatt ttgctggacg
      121 cgcaagatca agcttggttg atcgatttcg atcgggccaa agagggtgtg actgatagta
      181 aacagcttca agggaatctg agccgtctgt tgcgttccgt taataaagta tgccccgagt
      241 tggggcaacg cttgtggcca gtgttgtgtg acggttacgc ctacggctag aaattaattg
      301 aatcgcgtta gggtggggtg cgttgtcgcg caaaatggct ttagaatcac accgttcgct
      361 cccgttttgt gatgaaacgg gtttttttat tgacgatttt gttagtggct tggggtatta
      421 aagtcccggg tcacggatca gggaggctct catggttgca cgtcttctta gtgtggtagt
      481 ggcaggtacg cttggctgga tgggcgtggc aagcgcccaa gacgaacaag tcaatatcta
      541 taactgggcg gagtacaccg ctgaagatac gatcccgggt tttgagcgcc agtccggcaa
      601 aacggtgcag tacgacacct acgacagcaa cgacaccctg caagccaagt tgctcaccgg
      661 cagctcaggc tatgacatcg tggtgccatc gacgcactac gccaagcgcc agatagaggc
      721 cggtcttttc caaaaactgg acaagtccaa gattcctacc tggaataacc tcgatccagc
      781 gatcatggaa ttgctcacgc cggttgatcc caacaatgaa tatctcgtgc cttggggcta
      841 tggcaccaac gcgttgggct ttaacgtcac caaagcacaa gagatcctgg gcccggatgc
      901 caaactgaac gattggtcct tgttgtttga cccagaaaaa gccaagcaat ttcagtcctg
      961 cggcatttcc gtgctcgatg aggctgcaca agtctttccg gctgcgttgc attacttggg
     1021 caaagacccc aatagcagca accccgagga ctatcgcgcc gcactcgagc tgctgcagca
     1081 ggtgcgcccc tacattcgcc aattcagctc atcgggctac atcgatgagt tggcttccgg
     1141 cgacctgtgt ctggtctatg gctactcagg cgacgtgctg attgccggtg atcgtgctga
     1201 gcaggccggg cgcgactaca agattgattt tttcttgcct gacgatgggg cgcccgcctg
     1261 gtttgacacc atggctgtgc ctgctgacgc gcccaatcct gaaggggcgt ttgagttcat
     1321 tagttacttt aatgagccac aagtctcggc tgacatcacc aacgaaatgt tctaccccaa
     1381 tgccaatcag gcagcccgcg ctttggttaa gccttcggtt gctaacaacg aagccattta
     1441 tccaccgccc gaagtggcta aaaacctgtt tgtgattgag gctcagccgc ttgatattca
     1501 gcgtctgcaa acacgccttt ggtctgaact gaagtcggga cgctagtgcg acatgactca
     1561 ggttggcacg ggtagcttgt cagggttttc tggtgacgca caagcgtttt taaagctcaa
     1621 cgatctcacc aaggtttttg gtgagaccgt tgccgtgcaa tcggtgaacc tgacgattaa
     1681 tcgcaacgag atatttgcac tgctaggtag ctcaggttgc ggcaagtcga cgttgctacg
     1741 catgcttgcc gggtttgaga cggtgagctc aggcagcatt tatctggacg gtgaagacat
     1801 cacggcgctt gcaccctatg agcgaccagt gaacatgatg tttcagtcct acgccttgtt
     1861 cccgcacatg agtgttgagg ccaatgtcgg gtttggtttg aagcaagagg gcgttgctcg
     1921 acacgagatc cacgaacggg tctacgaggc acttgaactg gttcagatgt cgccttatgc
     1981 caagcgcaaa ccccatcagc tctcgggcgg gcagcaacag cgtgtggcgt tggcacgcag
     2041 tctggtcaaa cgcccaaagt tattgctgct tgatgagcca atgtcagcac tcgataagca
     2101 gattcgtcat aacacgcaaa ttgagctcgt tcgtattctg gaccagctcg gggtgacgtg
     2161 ctttatggtc acccacgatc aggaagaggc catgaccatg gccaatcggt tggccgtcat
     2221 gaccgagggg caaatcgagc aggtgggtac acctcaggag gtatacgcat ttcctaattc
     2281 gcggtttgtg gcggggttta tcggcaccac caatttgttt gaaggggtga tttcggtcga
     2341 tgagcccgat cacgtcatga ttgaaagcga ggacctgcag cgcccctttt atgtcgatca
     2401 cggtgttagt gaaccgttgg gtatgaccgt gtctgtgtcc ttgcgtcctg aacagattcg
     2461 ggtggcacgt caggcacccg atcagcccca caactggggg catggcatgg tcagtcacat
     2521 ggcctggatg ggcagctatg cgctttatca aatacggctc gactcgggca aggtcattga
     2581 agcaagcatg cccagtcagg tgctgatgga tacagagcca cctggtgtcg acgaagaggt
     2641 ctatgtcagc tgggggcgtg acagcgtcac ggtgttgtcg gcatgatcgg cgcgcgcatc
     2701 aagcgcatca atcgccgcag tacccaactc tggtctgtgt tgccaccgta tgcttggttg
     2761 gtgctgttct tgcttgtgcc atttgtactg gtgttcaaga tcagtctggc ggacctgagg
     2821 ttcggaatcc cgccgtatac gccactgaca agcatcaaag accaagccat tgagttaacc
     2881 gtgcatctgc gcggctatgc cttgctgttt agtgattcgc tctacatcag cacgtacatt
     2941 agctcattga agatggccgc agtcaccacc ttctggtgca tcttaatcgg ctaccccatg
     3001 gcgtattaca ttgcacgatc gccagactcg atacgcaatg tgttgttgct ggccgtgatt
     3061 ttgccgttct ggacgtcatt gttgttgcgt gtctatgcct gggtcgggat actgcgctct
     3121 gatggccttc tcaatggtgt gctcatgagc ctgggcgtga tcgatgcgcc tctggaaatc
     3181 tatcgcacag actgggcggt ctatattgga ttggtgtatg cctatctgcc cttttttatc
     3241 ttgccggcat atgccaatct agtgaagctc gatgcccgat tgctcgatgc cgcttacgat
     3301 cttggtgcca agccatggcg tgcgttctta gcaatcacac tgcccttgtc catgcctggc
     3361 atcatcgcgg gtgccatgtt ggtgttcata ccggccgtcg gtgaatacgt gatcccggag
     3421 ttgcttggtg gggctgatac gctcatgatg ggtcggatca tgtggaccga gttctttact
     3481 aacgccgatt ggcccatggc ctcggcagtg acggtcatca tggtgttgtt gctgttgatt
     3541 ccaatgatca tcttccaggt caatcaaaag cagcgctacg aagccgaacg gggtggggca
     3601 tgagttggct caagcgccgt gcgcccaatg acccgagccc gcttggtcga gtcattgcgc
     3661 tggggattgg gtttttcttt ttgtatgtgc caattgccac gctgatggtg ttttctttta
     3721 acgactcacc gatcatgaca agctggagtg ggttttcttg gcggtggtat gaggcgttgg
     3781 tcagtgatcg cgcgttatta aacgccgcct ggttgtcgtt ccaagtcgcg gtcatgacag
     3841 ccacggcagc gtcagtcatt ggcacctggg ccggttacgt gttggcgcgc aagggcagtt
     3901 tcaaaggctt ttctctgttc gtgggtctgg tgagcgcacc actggtgata cctgaagtgg
     3961 tgctcggtat ttcactgctg ttgttgttcg tggaaatgga tagtctcttt ggctggccag
     4021 gcgggcgtgg gctttttaca atctgggtag ggcatacgac gttttgtatg gcatttgtca
     4081 cggtgatcgt gcaatcacgt attcgtgatc tggatcgatc actagaggag gcggcacttg
     4141 atcttggcgc taccccattg cgggtatttt tctcggtgac cttgccgttg attgcaccag
     4201 ccatcaccgc gggctggttg ttggctttca cgttgtcgct cgatgatgtg gtgattgcct
     4261 catttttgtc tggaccaggt tcgacactct tgtcgccaga gatcttttct cgggtaaggt
     4321 tggggctaaa gcccgaggtc aatgcgctgg ccaccatatt cgtggtggtg gttgcagtgg
     4381 tcgtcgtggc cttaaatctg ttgcaacgtc gccaattgaa ggggaaatga tgcgtttata
     4441 tggacttaag aaatgcagca cctgccaaaa agccatcaat tggctcaaag agcagagtgt
     4501 tcaccacgag tttgtcgatt accgtgatga gccaatcgag cccaaagatt taaagcaata
     4561 cgccgagcac ctcggtggtt gggaaaaact cgttaatcgt gcctctatga cttggcgcaa
     4621 actcgctgat catgagcgcg aggttcacga cgatgagcag tggcaagcgc ttattgccca
     4681 gtatccgtcg cttgtgcgca gacccttggc ggttcattcc gatggctcag tgaccacagg
     4741 ctttaacgag aaacgcttta aagagaagct agagaagtcg tgacggcagt cgtgtccttc
     4801 gaagcctggc taactgaccc gcgaaccttg ccttggttgg tgatggcctg cctggcggtg
     4861 ttggtcttac tgctgctgtt actgcttgtc gttgggcgtc gcacaaaagc gttgagccag
     4921 caggctgagt cggacaagct tggccgggtc ttggataact tggagcggtt tgagcaggct
     4981 tggcgcaaag aactggctga tagccagcga cagctcagaa cagagctcgc ggatgcccag
     5041 cgcgccttgc gcgttgaact tgcgggtgct gacgagca
//
LOCUS       DATBNL010000568         3099 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_106623, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000568 DATBNL010000000
VERSION     DATBNL010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106623"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /gene="dctP"
                     /locus_tag="VIC30_09820"
     CDS             complement(<1..677)
                     /gene="dctP"
                     /locus_tag="VIC30_09820"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY7804713.1"
                     /translation="MGLKTLLKSVGAVVLAAGMMPGIASAEPEFKLTYSTYWPTTYGY
                     LYDPIVSFAKKVQDRSNGRIEIEIFHSAQLFGGKEELSALERGDIDLVAALDTYNTGL
                     VPELGITSMPFLWPNPDAIQKSLDAGLFDLGINQAMEKRNVKVLNVAAGGPYQIYGKD
                     FSVRTPADLKGKKIAVSGTAASKAMELVGAAPTSMSSSDLYVAMQRGTIDATSRPFLT
                     GIGRKLY"
     gene            1011..1961
                     /locus_tag="VIC30_09825"
     CDS             1011..1961
                     /locus_tag="VIC30_09825"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY7804714.1"
                     /translation="MPSTHTNHQDSLVSAHWLAKRIHEPGIRVIDCTTYMVAQPVGPS
                     KILSGKPDHKKAHIHGAVHIDMVDDLSDPNGQYPYTAIDTMQFNHLLARLGIEPTDHV
                     VLYGQSGISTITRAWFIFYLHGQSVSILDGGLANWVASGYETTDEQTTDELNTNLRNT
                     TTQTTSPKNKNATSTAQEASRQREPEVNRIVNREVVQQASQNRDTQLINALSAAQFAG
                     AGGAHYGRPGRIPNSLNLPAKDMIDPATGCFWDIETLAQKVKAAGISLEAPAIHYCGG
                     GIAATTSAFVMHLLGARHWSVYDDSLLDWSNQAHCPMVRD"
     gene            2243..>3099
                     /locus_tag="VIC30_09830"
     CDS             2243..>3099
                     /locus_tag="VIC30_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008348029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY7804715.1"
                     /translation="MVDTLAQAGVKQIFGVVGDSLNGFTDALLSKPDMQWIHMRHEEA
                     AAFAAGAQAQLTGELAVCAGSCGPGNLHLINGLFDCQRSRTPVLAIAAHIPSSEIGSD
                     YFQATHPEILFQECSDYVELVSNPALLPRIMERAMRVAIAQRGVAVVVIPGDVALAKT
                     DVAAPTWIAPRPSVITPQAADIEALSTLLNDGKRITLMCGAGSAGAHTEILALAKTLN
                     APIVHSLRGKEYVEYDNPHDIGMTGLIGFSSGYHAMTQCDTLLLVGTNFPYRQFYPEH
                     AKIAQIDCRA"
BASE COUNT          778 a          854 c          754 g          713 t
ORIGIN      
        1 tcgtagagct tgcgtccaat gccggtgaga aatggacgtg atgtcgcatc aatcgtgcca
       61 cgctgcatgg ccacgtaaag gtcacttgag ctcatcgatg ttggcgctgc gccaaccaac
      121 tccatggcct tgctggccgc cgtaccactg accgcaatct tcttgccctt taagtctgcc
      181 ggtgtgcgta cagaaaagtc tttaccatag atctggtagg ggccgcctgc agccacgttc
      241 aagaccttca cgttgcgctt ttccatggcc tgattgatac cgaggtcaaa cagacctgca
      301 tccaagctct tttgaatcgc gtctgggtta ggccacagaa atggcatcga tgtgataccg
      361 agttcgggca ccagtccagt gttgtaggtg tctagggctg ctaccagatc aatatcacca
      421 cgctcgagtg cggacaattc ttccttgcca ccaaagagtt gggcggaatg gaagatttca
      481 atctcaatgc ggccgttgga acgatcctgg acctttttag caaaactgac aatggggtca
      541 tacagataac cgtaggtggt gggccagtaa gttgaatagg tcagcttgaa ttcgggctcg
      601 gctgaggcaa tgccaggcat catgcctgcg gccaaaacaa ctgcgcccac tgactttagc
      661 agtgtcttta atcccatgaa ctgtctcccg tgtttttgaa ttatttatgc gttaattgac
      721 ccgtgtaacc ggggtgtgta accgttacat tatttacaac tcgagtcaat cgggaaaccc
      781 tctagaaaaa tcccttaagt gccatctagt ggattaatcg acggtattga tctttaagaa
      841 cgggacacag gcacgaaaca ccaaggtttt cttgaagacc agaagccctt gcccgcaccg
      901 attaccggca ccccttgccc gcggcctggc acttaggcat gatgaaagct ttacggcttg
      961 acgcctaaat acacctgcca aagcacccca ccaaactaaa agatctgatc atgcccagca
     1021 ctcatacaaa tcatcaagac tctctggtca gtgcgcattg gctggctaag cgtattcatg
     1081 aacctggcat ccgagtcatc gattgcacca cctatatggt ggcccaacct gttggtccat
     1141 caaaaatcct atcgggcaag cctgatcaca aaaaagctca catccacggt gctgtgcaca
     1201 ttgacatggt cgacgaccta tcagacccaa atggtcagta tccctacacc gccatcgata
     1261 ccatgcaatt taatcacctg ctcgcaagac tgggcatcga accgacggac catgtggtgc
     1321 tctacggtca aagtggtatt tccacgatca ctcgagcttg gtttatcttt tatttgcacg
     1381 gccagtcagt atcgattctg gatggtgggc ttgccaactg ggtggcgagc ggctacgaaa
     1441 ccactgacga acagaccact gacgaactaa acaccaacct gcgaaacaca actactcaaa
     1501 caacaagccc aaaaaacaaa aatgccactt ccacggcgca agaagcaagc aggcaacgtg
     1561 aaccggaggt caaccgaatt gtgaatcgtg aagtggtgca acaagcatcg caaaaccgag
     1621 acacacagct catcaatgct ctttcagcgg cgcaatttgc tggcgcaggt ggcgcgcact
     1681 atggacgacc cggacgtatt ccgaacagtt tgaatctgcc ggccaaagac atgattgatc
     1741 cggccaccgg ttgcttttgg gacatagaaa cgttggcgca aaaggtcaaa gccgctggca
     1801 tctctcttga ggcgcccgcc attcattact gcggcggtgg gattgccgcg accaccagcg
     1861 catttgtcat gcatttgttg ggtgccagac attggtctgt ttatgatgac tcgctattgg
     1921 actggagcaa tcaggcgcac tgccccatgg tgcgtgacta atggtgatga tgtagtgatg
     1981 tactgacgcc aacaatgcat caaagaccac gcgattgctc aagcgccggc ctatggtaca
     2041 aaacacgact aaccttctcg cagcctgact catttatcgt acgcacggct tgagacagct
     2101 caaaacacaa accataccta ttccaacgcc cgcataatgg tcctgacaaa aaagtcatca
     2161 attcgccatg ggtttgcgct aatctcacat aaaaattcca acaataggag tctgaaccgt
     2221 gtctacaacc gtcgcaaaac tcatggtcga tacgcttgca caagcaggcg tcaaacaaat
     2281 ctttggtgta gtcggtgact cactgaatgg ctttaccgat gcgctgctct caaaacccga
     2341 tatgcagtgg atccacatgc gtcatgagga agctgctgct tttgcggctg gcgctcaagc
     2401 gcaattaacg ggtgagttag ccgtctgtgc aggcagctgt ggcccaggta atttgcacct
     2461 gatcaatggt ttattcgatt gccaacgcag ccgcacgccg gtgttggcga ttgccgcgca
     2521 cattccaagc tcggaaattg gtagtgacta tttccaggca acccatccag agatcttgtt
     2581 tcaagaatgc agcgattatg ttgagttggt ctctaatcca gcattattgc ctcgcatcat
     2641 ggaacgcgcc atgcgcgtgg cgattgccca acgcggtgtc gccgtggtgg tgattcccgg
     2701 cgatgtcgca ttggctaaaa ccgatgttgc cgcaccaacc tggatcgcac cgcgaccgag
     2761 tgtcattacc ccgcaagccg ctgacattga agccttgtcg acacttctga atgacggtaa
     2821 acgcatcacg ctcatgtgtg gtgcaggcag cgcgggcgct cacactgaaa ttttagcgct
     2881 cgccaaaacc ctcaatgccc ccatcgtgca ttccctgcgt ggcaaggaat atgtcgagta
     2941 cgacaatcca catgacatcg gcatgacggg cttgattggg ttctcctcgg gctaccacgc
     3001 catgacccag tgtgacacct tgctgctcgt gggcactaac ttcccttatc gacagttcta
     3061 ccctgaacac gccaagatcg ctcaaatcga ctgccgtgc
//
LOCUS       DATBNL010000569         5902 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96493, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000569 DATBNL010000000
VERSION     DATBNL010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5902
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96493"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..502
                     /locus_tag="VIC30_09835"
     CDS             170..502
                     /locus_tag="VIC30_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804716.1"
                     /translation="MSRSHRKTPIFGITAAQSERRDKQHWHRRWRLQERMALRKLAPT
                     ELDTHIDTDARAAGNVWAMAKDGRQYWPSTEQMRWAEAQVQTHPYMHDPDQAKARRMR
                     LIRKVMAK"
     gene            complement(673..1170)
                     /locus_tag="VIC30_09840"
     CDS             complement(673..1170)
                     /locus_tag="VIC30_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008652088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY7804717.1"
                     /translation="MHKRYLWVAAVTVFAVIASVLIVAFLWPWQANKSTQPHPNWIAP
                     AQGEIKLQGKQLYAMYCASCHGAELEGQSNWRARMANGRLPAPPHDINGHTWHHPDWQ
                     LVEMTKIGFVGGVNAPPGYESDMPAFKDVLTDEQIRFILAYIKTSWPESALAAQKEIT
                     LKNAP"
     gene            complement(1177..1950)
                     /locus_tag="VIC30_09845"
     CDS             complement(1177..1950)
                     /locus_tag="VIC30_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011004859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY7804718.1"
                     /translation="MNLTFDNRFKARLLRGEPQIGLWLSIPSAFTAEICATAGYDWLL
                     LDGEHTPNDIQTVLAQLQACAGYPQTHPIARPVIGDPVIIKQMLDVGVQTLLIPMVDT
                     AEQAHELVRATRYPPHGIRGVGYGTARVSRWDLRQNYTQVANDEVCLLVQAETEQAIN
                     NLEAICQVEGVDGVFLGPADLAAAYGHLGNPAHPAVQAVIENAIATILKHGKAPGILT
                     PDENLAKHYLSLGAKFVAIGLEARVLARGVRELRQRFTT"
     gene            complement(1954..3048)
                     /locus_tag="VIC30_09850"
     CDS             complement(1954..3048)
                     /locus_tag="VIC30_09850"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012218351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HEY7804719.1"
                     /translation="MSKTFRIAVLPGDGIGKEVMPEGLKVLQTAADQFDLNLVFEHHD
                     WASCDYYAAHGDMMPVDWKDRLAGCDALLFGAVGWPDMVADHVSLWGSLLKFRREFDQ
                     YINLRPVRLFEGVPCPLANRKAGDIDFFVVRENTEGEYTSLGGTMFAGTDREIVIQES
                     VFSRIGTDRVLKYAFELASQRARKHLTIATKSNGIAISMPYWDGRAAEMAKRYPNITT
                     DKQHIDILSARFVLQPDRFDVVVASNLFGDILSDLGPACTGTIGLAPSGNLNPDRVFP
                     SLFEPVHGSAPDIFGKGIANPIAMIWSGALMLDFLGRGLEGAEQARYLKAHDAILKAI
                     ETVLAQGPRTPDLGGDATTAALGDAVAKLV"
     gene            complement(3146..3994)
                     /gene="proC"
                     /locus_tag="VIC30_09855"
     CDS             complement(3146..3994)
                     /gene="proC"
                     /locus_tag="VIC30_09855"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEY7804720.1"
                     /translation="MMTQIHTAFIGGGNMAGALIEGLLKQGVPATHLHVLDINRETRD
                     KWQSRGLSVASEPTAILSQYPMWLLAVKPQQLAEVTAQLKPFLQEDTLAVSIAAGISL
                     QTLSQWLGTANQPWTKVVRAMPNTPALVERGMTGLVAGEGVSAEYRDQVEQLLSAVGE
                     VLWVESDQMIDAVTAVSGSGPAYVFRFIEAMMAGARHLGLDDAQAKQLTLATLAGATE
                     LASQSAEPVSTLRARVTSKGGTTAAALDVLEQREFEQVIGAAMQAAYDRAGALSKELA
                     DHGTKD"
     gene            complement(4160..5029)
                     /gene="ubiA"
                     /locus_tag="VIC30_09860"
     CDS             complement(4160..5029)
                     /gene="ubiA"
                     /locus_tag="VIC30_09860"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017879260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEY7804721.1"
                     /translation="MSGDVLNRLGLYARLVRIDKPIGTLLLLWPTLWALWTAGQGMPP
                     LAILVIFVLGTFLMRAAGCAINDYFDRDFDRHVQRTEARVLTTGQISPKEALWVAATL
                     AFFAFLLVLLLNPLTIGLSFIALLLAATYPLMKRLFGMPQAYLGIAFGFGMPMAFAAI
                     TNTVPAVAWVFLVANVFWTVAYDTEYAMVDREDDLKLGLKTAAITFGRFDVLAIGICY
                     AMALALLAVAGSLMQWGAYYYGGLALALGIAITHLYWIRGRDRKACFKAFRHNNWFGA
                     AVFAGIVLQHALG"
     gene            complement(5033..5548)
                     /locus_tag="VIC30_09865"
     CDS             complement(5033..5548)
                     /locus_tag="VIC30_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dps family protein"
                     /protein_id="HEY7804722.1"
                     /translation="MAKKSVTGTKAPTTKAPAINIGISAKDRATVAGELSKMLADSYT
                     LYLMTHNFHWNVEGPMFNTLHNMFMTQYTEEWTALDQIAERIRALGHFAPGTYAEYAK
                     LSSIREPKAVPEATDMIRLLVQGNEAVAKTARHALGQADQANDQPSADLLTQRLDVHE
                     KNAWMLRSLLQ"
     gene            complement(5613..>5902)
                     /locus_tag="VIC30_09870"
     CDS             complement(5613..>5902)
                     /locus_tag="VIC30_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005019523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY7804723.1"
                     /translation="TFEGSSLETIRHMVAAGIGLTVMPVTSLMQHDQPGSQLLKYVPF
                     KAPAPERRVVLAWRKSFPRMAAIRAFIDTIQAIDLPGVRMIDVADRALAED"
BASE COUNT         1426 a         1656 c         1487 g         1333 t
ORIGIN      
        1 ttttctccac gcagcagtct acccaataaa cgcataatgt atattatgta aagtaaatac
       61 cgcaggtcag ttacggtgca gtgaattcat gatgagtgcg ttgcatgcca cggtatcaac
      121 ccttccatca ctgcttctta accgacctcc tttacgcagg aaacccaaca tgagccgctc
      181 ccatcgtaaa acccccattt ttggcatcac cgccgcacaa agtgaacgtc gtgacaaaca
      241 acactggcat cgccgttggc gattgcaaga acgcatggcg ttacgcaagc ttgcaccaac
      301 tgaactagac acccacatcg acacggacgc cagagccgca ggtaacgtct gggccatggc
      361 caaagatggc cggcaatact ggccaagtac tgagcaaatg cgttgggctg aagctcaagt
      421 ccagacgcat ccctatatgc acgaccctga tcaggcaaaa gccagacgca tgcgactcat
      481 cagaaaagtc atggccaaat aacgctattg aaggcgcctt gtcgtgtagt tgttgttgca
      541 gttctcgctg caatcttcac cataacctgc actaaagccc gcaatacagc ccgcaccaca
      601 gcccgcacca caaccccccc acaccgcgct ttgatgtatt ccaatcaggg cgcggttttt
      661 agtgtgaggt ctctagggtg cattttttag cgtgatctct ttctgtgcgg caagcgcaga
      721 ttcgggccaa ctggttttaa tgtaggccaa gatgaaacgg atctgctcgt cagtcaggac
      781 atccttgaag gcgggcatgt cactttcata gcctggcggc gcattcacgc cacccacgaa
      841 cccgatcttg gtcatttcta cgagttgcca atccggatgg tgccaagtgt ggccattgat
      901 gtcgtgcggt ggtgccggca gtcgaccatt ggccattcga gcacgccagt ttgactgccc
      961 ttctaattca gcaccatggc aactcgcgca atacatggcg tacagttgct tgccttgaag
     1021 tttgatctcg ccctgggccg gggcaatcca gttggggtgt ggttgtgtcg atttattagc
     1081 ttgccatggc catagaaaag cgacaattaa gacgctcgct atcacggcaa acacagtgac
     1141 cgcagcgacc cagagatatc ttttgtgcat acctgcttag gtggtgaaac gctgccgaag
     1201 ttcccttaca ccacgtgcca gcaccctcgc ctctaagcca attgccacaa acttggcacc
     1261 gagcgacaag tagtgtttgg cgaggttttc atcgggcgtg agaatccccg gtgccttgcc
     1321 gtgtttgaga atggtcgcaa tagcgttctc aatcacggct tgcacagcag ggtgagctgg
     1381 attgccgaga tgaccatagg cggcggccaa atccgcaggt cccaagaata cgccatcaac
     1441 gccttcgacc tgacaaatgg cctctaagtt attgatcgcc tgctcagtct cggcttgcac
     1501 caacaggcac acttcatcgt tggcaacttg cgtgtagttc tgacgtaagt cccagcgcga
     1561 tacgcgagca gtaccataac caacgccgcg tatgccatga ggtgggtaac gcgtggcacg
     1621 caccagttca tgtgcttgct cagcggtatc aaccatgggg atcaacaagg tttgcacacc
     1681 gacatcaagc atttgcttga tgatcacagg gtcgccaatc acgggtctgg caatgggatg
     1741 cgtctgtggg tagccggcgc aggcctgtag ttgggctagc accgtttgaa tatcattggg
     1801 ggtatgctcg ccatcgagca agagccagtc atagcctgca gtggcgcaga tttctgcggt
     1861 aaaggcactc ggtatagaca accacaaccc gatttgtggt tcaccgcgca ataaacgcgc
     1921 cttaaaacga ttatcaaatg tcaggttcat gattcacacc agttttgcaa cagcatcacc
     1981 aagcgccgcc gttgtcgcgt cgccaccaag atccggggtg cgtggccctt gggcgagcac
     2041 cgtttcaatc gccttcagaa tggcatcgtg ggctttgagg tatcgtgctt gctcagcgcc
     2101 ttcaagcccc ctgcctaaaa agtccagcat caaggcaccc gaccaaatca tggcgattgg
     2161 attagcgatg cctttgccaa agatatcggg tgctgagccg tgcaccggct caaagagcga
     2221 cgggaacaca cgatcaggat tgagattgcc agacggagcc aagccgatgg tgcctgtaca
     2281 tgctggcccc aagtccgaca aaatatcgcc aaataaattc gatgccacca ccacatcaaa
     2341 gcgatcaggc tgcagtacaa aacgcgctga caagatatcg atgtgctgct tatcggtggt
     2401 gatatttggg tagcgtttcg ccatttctgc tgcacggccg tcccaataag gcatgctaat
     2461 ggctatgccg tttgacttgg tagcaatggt caggtgctta cgcgcgcgtt ggctggctaa
     2521 ctcaaacgca tacttcaaca cacggtcggt ccctatccgg ctaaagaccg attcttgaat
     2581 cacgatttct cggtctgtgc cggcaaacat cgtgccgccc agtgaggtgt attcgccttc
     2641 ggtgttttct cgtacgacaa agaaatcgat atcaccggct ttgcgattgg ccagtgggca
     2701 cggcacaccc tcgaacagcc ttaccggtcg caagttgatg tactgatcaa actcgcgacg
     2761 gaattttaag agcgaccccc acagggatac atggtcggca accatatctg gccaccctac
     2821 tgcaccaaac agcaatgcat cgcagccggc cagacggtct ttccagtcaa ccggcatcat
     2881 gtcgccgtgc gcagcgtaat aatcgcaaga ggcccagtcg tgatgctcaa atacaaggtt
     2941 caggtcgaat tgatcggccg ccgtttgcaa caccttaagc ccctcgggca tcacctcctt
     3001 accaatgccg tcgcccggta aaacggcgat acgaaacgtt ttgctcattt gtttagttcc
     3061 ctattgaatt attttgttga ttgttgtttt tttggttgtt gtggttccgt tgtttctgtt
     3121 agcgctattg aaattcactt cgctgtcagt ctttcgttcc atgatcagca agctctttcg
     3181 acaaggcccc tgcccgatcg tatgctgcct gcatggcagc accaatgact tgctcaaact
     3241 cgcgctgttc aagcacatcg agtgccgctg ccgtggtgcc gcctttggag gtcacgcgtg
     3301 cgcgcaaagt cgacactggc tcagctgact gcgaggctaa ctctgtggca ccagccaagg
     3361 tagcaagcgt taactgtttg gcttgtgcat catctaatcc caagtgccgt gcaccggcca
     3421 tcatggcctc gataaagcga aacacgtaag ctggcccact gcctgaaaca gcggtgactg
     3481 catcgatcat ttgatccgac tcgacccaaa gcacttcccc tacagccgat aacagctgct
     3541 cgacttggtc gcgatactcg gccgagacgc cctcaccggc cactaaccca gtcataccgc
     3601 gctcgactaa ggcaggcgtg ttgggcatgg cgcgaaccac cttggtccaa ggctgattgg
     3661 ccgtgcctaa ccattgagat agtgtctgca acgaaatccc ggcggcaatg ctgacagcca
     3721 gcgtgtcttc ttgcaaaaac ggtttcagtt gagcggttac ttcggcgagt tgctgcggtt
     3781 taaccgctag cagccacatg ggatattgcg acaatatcgc cgttggctca cttgctacag
     3841 acaatccacg cgattgccac ttatcacgtg tctctcggtt gatatcgaga acatgtaaat
     3901 gggtagccgg cacgccttgt ttgagtagtc cctcaatcag cgcacctgcc atgttgcccc
     3961 cgccaatgaa ggcggtatga atttgtgtca tcatgaaacc caactatctg atgcaaaaat
     4021 gtttaatgat atgttcgatg aactgttcaa tgttacgcag gcgtaggtca gcggggttgt
     4081 cactgcggtt gtcaccgtgg ttccacacct ctgctgctga gcattacctt ggcagtcaag
     4141 tctcgctaac cgagtcttac taaccgagcg catgctgcaa cacaatacca gcaaagacgg
     4201 cagcaccaaa ccagttgttg tgcctgaaag ccttaaaaca agctttacga tcacggcccc
     4261 tgatccagta caggtgcgtg atggcaatgc ccagcgctag cgcaagccca ccgtaataat
     4321 aagcgcccca ttgcatcaga ctaccggcga ctgccagtaa ggcgagcgcc atggcatagc
     4381 agatgccgat ggccaagaca tcaaatcgac caaaagtaat ggcagcggtt tttaacccga
     4441 gctttaggtc atcttcgcga tcaaccatgg cgtattccgt gtcataggcc accgtccaaa
     4501 acacattggc caccagaaac acccaggcca cagccggcac agtattggta atggcggcaa
     4561 atgccatggg cataccaaac ccaaacgcga ttcccaagta ggcttgtggc ataccaaaca
     4621 ggcgtttcat caaggggtat gtcgccgcaa gcaacagcgc aataaacgac agcccaatcg
     4681 ttaaggggtt gagcagcaac accagtaaaa aggcaaaaaa cgccagtgtt gcagccaccc
     4741 aaagcgcctc tttggggctg atttggccgg tggtcagtac gcgcgcctca gtgcgttgca
     4801 catgccgatc aaagtcgcga tcgaaataat cattgattgc acaaccagcc gcacgcatca
     4861 gaaacgtgcc tagaacaaaa atcaccaaga tggccagcgg cggcatgccc tgcccggctg
     4921 tccacaaggc ccataatgtg ggccataaca gcaggagcgt gccaatcggc ttgtcaattc
     4981 gaaccagccg ggcataaagc ccgagccggt taagcacatc accagacatg gattactgca
     5041 acaaacttcg caacatccaa gcgttcttct catgaacatc gagacgctgc gtcaataagt
     5101 cggcacttgg ctgatcattg gcttgatcgg cttgaccgag tgcgtggcgt gcggtttttg
     5161 cgaccgcttc gttgccttgg accagtaacc gaatcatgtc agtcgcttcg ggcaccgcct
     5221 ttggctcgcg aatcgaagac aacttcgcgt attcagcata ggtgccaggg gcaaagtgac
     5281 ccaaagcacg aatccgttca gcaatctgat caagcgccgt ccactcttcg gtgtactgcg
     5341 tcatgaacat gttgtgtagc gtgttgaaca tcgggccttc cacattccag tgaaagttat
     5401 gtgtcattag atacagcgtg taagagtctg ccagcatttt ggagagctca ccggcaaccg
     5461 ttgccctgtc tttggcagag atgccgatat taattgcagg cgctttcgtt gttggggctt
     5521 tagtgcctgt tactgatttt ttggccatga tcattccttt ggcaaataaa aacaaaatac
     5581 ctcttcaggg taccaccaca catacagcgc gtctaatctt ctgccagtgc acggtcggcg
     5641 acatcgatca ttcgaacgcc aggcaaatca atggcttgaa tggtgtcgat aaacgcccga
     5701 atcgctgcca tacgcgggaa actctttcgc caagctaaaa caacacgacg ctcgggtgct
     5761 ggcgccttaa aaggcacgta tttcagcagt tgcgaacccg gttggtcgtg ttgcatcaag
     5821 gaggtcacgg gcatgacagt cagaccaatg ccggctgcca ccatgtgccg gatggtctca
     5881 agcgacgatc cctcaaacgt gc
//
LOCUS       DATBNL010000570         1619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136463, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000570 DATBNL010000000
VERSION     DATBNL010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136463"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VIC30_09875"
     CDS             <1..239
                     /locus_tag="VIC30_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804724.1"
                     /translation="GQWQVARTGTGALTELHRENHTETKHTGMPKPPTPDKAPSDCGK
                     GCIAALLLILVLLILLLVFYEPTPTAGDMCKIYG"
     gene            complement(236..604)
                     /locus_tag="VIC30_09880"
     CDS             complement(236..604)
                     /locus_tag="VIC30_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012746253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HEY7804725.1"
                     /translation="MSFFEAVAACFSKYATFSGRSSRAEFWWFALFNILAALMLLNLV
                     ASFAGPVVAQNVVVVYNLAILVPTLAVGARRLHDMGHSGWWQVLHITGIGSVILFFWL
                     MFAGNPDANRFGEPVVSKDS"
     gene            complement(751..1500)
                     /locus_tag="VIC30_09885"
     CDS             complement(751..1500)
                     /locus_tag="VIC30_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012366344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804726.1"
                     /translation="MTGLNLSDSVVMVSGGARGIGAATVRRLIEDGARVMIADILDAE
                     GQALASELGANAAYCRLDVTQADQWQAVVAQTLAHFGRLDGLVNNAGVVSFQGIETET
                     AEGFARVIDINLMSVFLGTQAVIEPMKQAGGGVIVNVSSTAGLQGYAGLSAYVASKWG
                     VRGLTKAVALALAPHHIRVLSIHPGPVRTPMTANMPDEVVQNQPIARFGEPKEVANMI
                     RFMLAEASFSTGSEFVVDGGAVTGQVLALQN"
BASE COUNT          432 a          479 c          392 g          316 t
ORIGIN      
        1 ttggtcagtg gcaagttgct cgcaccggaa ccggcgcact gacagaacta caccgagaga
       61 accacaccga gacaaagcac accggcatgc ccaagccacc cacccctgat aaagcaccga
      121 gcgactgcgg caaaggctgc atcgcagcct tgctcttaat tctggtgtta ttgatcctgc
      181 tgctcgtgtt ctacgagccg acgccgactg ccggtgacat gtgcaagatc tatggctaac
      241 tgtcttttga caccacgggc tcgccaaacc gattggcatc cgggttgccc gcaaacatca
      301 gccagaaaaa caggatcacc gagcctatgc cagtgatgtg caacacctgc caccaacccg
      361 aatgacccat gtcatgcaga cgtcgggcac cgacagccaa ggttggtacc aaaatggcga
      421 ggttatagac caccaccacg ttttgtgcga ccaccggacc agcaaacgag gccacaaggt
      481 tcagcaacat tagggcggca agaatgttga ataaggcaaa ccaccagaac tcagcacgtg
      541 aagatcggcc cgagaaagtg gcgtacttgg aaaaacacgc ggcgactgct tcaaaaaacg
      601 acatgtgaca ggtcatccaa taactgatcg gatgctcatc gtaacttcgc ttgtggttac
      661 agcacaagcg acgatggcca gtctgagcta gccaatcggt ctcaagatgc ctatttataa
      721 gtaggcgcta attgaaaata tggtgcgtac ttaattctgc aacgccagca cctgcccggt
      781 cactgcgccg ccatcgacca caaattcgct gccggtgcta aatgaagcct ctgccagcat
      841 gaatcgaatc atgttggcga cctctttcgg ttcgccgaaa cgtgcaattg gctggttttg
      901 cacaacctca tcaggcatgt tagctgtcat gggcgtgcga accggtccgg gatggatcga
      961 caaaacccgt atgtggtgcg gcgccaaagc aagcgctaca gccttggtca acccacgaac
     1021 accccacttg ctagccacgt aggcagacaa acctgcatag ccttgcaaac cagcggtcga
     1081 tgacacattc acaatcacgc caccaccagc ttgtttcatc ggttcaatga ccgcttgtgt
     1141 gccaaggaac acactcatga gattgatgtc aatcacccgg gcaaaaccct cggcggtctc
     1201 cgtttcaata ccctgaaacg acacaacgcc cgcgttatta acaagaccat caagtcgccc
     1261 gaagtgcgcc agggtttgcg caaccactgc ttgccattga tcggcttgtg taacgtccag
     1321 ccggcaataa gctgcgtttg ccccaagttc gctcgcgagt gcctgaccct cagcgtctag
     1381 gatgtcagcg atcatcactc gagcgccatc ttcaataagt cgtcttaccg tggccgcacc
     1441 aataccgcgc gcaccgcctg agaccatcac cactgagtcc gaaagattca agccagtcat
     1501 acggagcctc cctaatacgg ttgcatgttg gttagagcta aaagaggtag cactaaaccc
     1561 atagctttca cactagcatg ggtcagagag aaagaaaaca ggaacgactt gactacacg
//
LOCUS       DATBNL010000571         2292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_46727, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000571 DATBNL010000000
VERSION     DATBNL010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46727"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..992)
                     /locus_tag="VIC30_09890"
     CDS             complement(90..992)
                     /locus_tag="VIC30_09890"
                     /inference="COORDINATES: protein motif:HMM:NF021509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HEY7804727.1"
                     /translation="MSAADANPKAVTDRVRGLLAQQIRAMTGSSSGPPVAFLEPHGDP
                     GWFGPDSVTWRVHAHLVSMLTGGLSSLLIQAMHPGALAGVWDHSNFRTDLKARLGRTA
                     YFIAATTYGGKDMAQKAVDHVNHIHAGVRGTRPDGSPYDARDPHLLRWVHLGETLSFL
                     KGYCAFGDQALPLFAQNQYIYEMQRIGHALGATDLPASVAEAEDMLLSYRPELVVDDR
                     VREVVAMLKNFPSRKRDRPFVKLIVSAAFDLLPAWALEDLGQPVRPVWQVNATRQLLA
                     LASVPLDWTLATEGVSAHARRRLA"
     gene            complement(973..1734)
                     /locus_tag="VIC30_09895"
     CDS             complement(973..1734)
                     /locus_tag="VIC30_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013233799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804728.1"
                     /translation="MRNSVKQKTILITGGSRGIGAATARLAATHGYQVAVNYASNEAA
                     AQAVVKEIEALGSKAQAFKADVTKDHEVVGLFQGVDEAFGGVDVLVNNAGILETFSIL
                     DVDEARLRRTFEANLFSLYYCSREAVKRMSTDRGGAGGAIVNLSSAAAKLCSMPGGNA
                     YSASKAAVDGFNLSLANEVGAQGIRVNAVRPGLIATDIQNGRGGIEVAAEIAKTAVPM
                     RRIGQPEEIAQAIIWLASPEASYVHGAVLDVGGGR"
     gene            complement(1747..>2292)
                     /locus_tag="VIC30_09900"
     CDS             complement(1747..>2292)
                     /locus_tag="VIC30_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804729.1"
                     /translation="SIAGFVEARRYQAVDANPKYFATYTTSAFEDLSSPAYKTALANQ
                     TAWSKTNLARAQDMIRVVGRITASRGQGRGGALAVIRLRPDLAQATQWRQKVEALLDP
                     GTLDGVISMHLIESDPDLSVSLTEPDRPNPGASDWFVLLEGTHLPAVTELAEARFVDI
                     GLQVISTGSYQLLWDLAKAEL"
BASE COUNT          510 a          639 c          650 g          493 t
ORIGIN      
        1 tttttatata aaatcaatat gggtaaattg tattgctcga cagcatggca agcatgcgac
       61 tgaagctaca caaaggcagt gggttcagac taagccagtc gccggcgagc gtgggctgac
      121 acgccctcag tggcgagcgt ccaatccagg ggcacactgg caagtgccag caactgtctg
      181 gtggcattga cttgccatac gggacgcacg ggttgaccga ggtcctctaa tgcccatgct
      241 ggcagcagat cgaaggccgc actgacgatg agtttgacaa acgggcggtc acgtttacgc
      301 gaagggaagt tttttagcat cgccacgacc tcacgcacgc gatcatcaac caccaactcg
      361 ggccgatatg acaggagcat gtcttcagcc tctgccacgc tggcaggcag atcggtggca
      421 ccgagggcgt gaccgatgcg ttgcatttcg tagatgtatt ggttttgcgc gaacagcggc
      481 aaagcctgat caccgaaggc gcagtagccc tttaaaaaac tcaaggtttc gcccaaatgc
      541 acccagcgca acaggtgtgg gtcacgtgcg tcatatggac tgccatcagg acgggtgccc
      601 ctgacccctg catggatgtg attgacgtga tcaacggcct tttgtgccat gtctttgcca
      661 ccgtaggttg tggcagcaat aaagtaggcg gtgcgcccca gtcgggcttt taagtccgtt
      721 ctgaaattcg aatgatccca gacgccagct aatgcgcctg ggtgcatggc ctgaatcagt
      781 agtgaagaca gaccgccggt aagcatcgaa accaagtgcg catgtacacg ccatgtcacg
      841 ctgtctggtc caaaccatcc cgggtcaccg tgcggctcga gaaacgccac aggtggccct
      901 gacgatgagc ctgtcatggc gcggatttgc tgcgcaagca acccacgcac gcggtcggtg
      961 accgccttgg ggttagcgtc cgccgccgac atcaagcacc gcaccgtgaa cataagaagc
     1021 ctctggcgaa gcaagccaaa tgatagcctg ggcaatctcc tcaggctgcc caatgcgccg
     1081 catcggtaca gcagttttag cgatctcagc tgccacctca atgccaccgc gtccgttctg
     1141 tatgtcggta gcgattagcc ctggacgaac ggcgttcacg cgaatgcctt gtgcaccgac
     1201 ctcgttggca agtgacaggt taaagccatc gaccgctgcc ttggaagcag aatacgcatt
     1261 gccgccaggc atagagcaaa gtttggctgc agctgacgac aggttaacga tggcgccgcc
     1321 tgcgccacct cggtccgtcg acatccgttt aacggcctcg cggctgcagt aataaaggct
     1381 aaataggttg gcttcgaatg tgcgacgcag gcgagcttca tcgacatcta ggatgctaaa
     1441 cgtctctaag ataccggcgt tgttgaccag tacatcaaca ccaccaaatg cttcatcaac
     1501 gccttggaac agacccacaa cctcatgatc tttggtgaca tcggctttaa acgcctgagc
     1561 ctttgagcca agcgcctcta tctccttgac cacagcctgt gctgccgctt cattgctggc
     1621 gtagttaact gcgacctgat agccgtgggt cgcggcaagt ctggcggtgg cagcgccgat
     1681 gccacgactg ccgcccgtaa tgagtatggt tttttgtttc acggagttcc tcattttgtg
     1741 tgtacgttag agttcggctt tggccagatc ccaaagcaac tggtagctgc cagttgagat
     1801 cacttgaagt ccaatgtcaa cgaatctagc ctcggccagt tcagttacag caggcaagtg
     1861 tgtgccttcg agcagcacaa accagtcact tgcacccggg ttaggtctgt ccggttcggt
     1921 cagagacacc gacagatctg gatcgctttc gattaagtgc atggagatca cgccatcgag
     1981 ggtgccggga tcgagcagcg cctcgacctt ctgacgccat tgggtcgctt gcgcaagatc
     2041 agggcgcaga cgaatgacag cgagcgcgcc accacgacct tgaccccttg aggcggtgat
     2101 gcgtccaacc acacgaatca tgtcttgtgc acgtgccagg ttggttttag accacgcggt
     2161 ttggttggcc aacgcggttt tgtaagctgg gctgcttagg tcttcgaatg ctgacgtggt
     2221 gtatgtcgca aaatatttgg ggttggcgtc aacggcctga tagcggcggg cctcgacaaa
     2281 gccggcaatg ga
//
LOCUS       DATBNL010000572         4458 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_36825, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000572 DATBNL010000000
VERSION     DATBNL010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4458
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36825"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            273..1034
                     /locus_tag="VIC30_09905"
     CDS             273..1034
                     /locus_tag="VIC30_09905"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804730.1"
                     /translation="MKVKDKHLVMVTGGARGIGADIVDRVARREYPVCFSYLSRDKEA
                     SDLVARLQAQGCSVAGIRSDVSRSEDIEDFFAQAQQTFGPLGGFVNNAGYVGRAGREV
                     SNLDHDTLRRCFDVNAIGPIMCSQLALQQLSTVNGGSGGRIINVSSIAARTGSPWDWV
                     DYAASKGALNTFTVGFGKEVAKQGVQVIGVGPGGVATELHTQAGQPERLARFCDITPI
                     GRPAESAEIADVVVWALLDAPDYLTATTIEVSGGL"
     gene            complement(1211..2182)
                     /locus_tag="VIC30_09910"
     CDS             complement(1211..2182)
                     /locus_tag="VIC30_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEY7804731.1"
                     /translation="MAKPRIYMHDVSPRDGFQNESVFIETADKIAFINALSQCGFAKI
                     EATSFTSPKAIPALRDAEDVMHEIVRAPGVEYTVLIPNVRGAERALACGIDEANLVMS
                     VSETHNRANLRMTREQSLAQLGQVIEVLQTRSSVNKRVAVNVSLSTAFGCPMEGEIAE
                     SEILRLVDNFARQGVKRISLCDTTGMAFPSQVRKLCRKAKANYPEMTFTLHFHNTRGL
                     AQSNVLAAIDAGIDRFDAALGGIGGCPYAPGASGNACTEEVVHMLELEGFDTGVDLAK
                     LMAVSAMLPNLVQHDVPSQILKAGHRLTAHPAPAYVQEIGQAQRVVA"
     gene            complement(2471..3169)
                     /locus_tag="VIC30_09915"
     CDS             complement(2471..3169)
                     /locus_tag="VIC30_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013955455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY7804732.1"
                     /translation="MSDFVFAPPAVVGIPVVGSKQSFAVRRVFCVGRNYAEHAKEMGF
                     TGREDPFFFCKPADALVVVPDGEQGQIHYPPKTSNLHYEMELVVALGSGGKDISVDQA
                     QAHIYGYALGLDMTRRDLQGEAKKQGRPWEVGKAFDESGPIGPIHPVAKTGVLNAGRI
                     ALSVNGQTKQDSNLDQLIWNIPESIAYLSGLFELKAGDLIFTGTPEGVGAVVAGDTMV
                     GSFEGLGELKVEVV"
     gene            complement(3316..3537)
                     /locus_tag="VIC30_09920"
                     /pseudo
     CDS             complement(3316..3537)
                     /locus_tag="VIC30_09920"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
     gene            complement(3838..>4458)
                     /locus_tag="VIC30_09925"
     CDS             complement(3838..>4458)
                     /locus_tag="VIC30_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7804733.1"
                     /translation="LVFALSILLVYLVLAGQYESWAAPIAVLSAVPLALSGIVVALLS
                     IGFANNIYVQIGMVLMIALSAKNAILIVEVAIEGLRNGMTYEEAALHASHERFRPIVM
                     TSIAFILGVVPLVLASGAGAVSQFSIGITVFSGMIASTTLAVAIVPVFFVKIMKFFKA
                     GMLEDEGEDGEDDGGGSGGPNGSGGKDGKDGNADTMPVTDKPAVAT"
BASE COUNT         1073 a         1237 c         1117 g         1031 t
ORIGIN      
        1 taagcattgc tcatagcatc gcaacaaatt cgcttcgcgt caagagatag tgaaataggc
       61 atgctaagcg cagaccgtgg atacccactg atctgttgcc cgagccaatc gagcagtaag
      121 ctgaggcagt aagctgacct taagtgctcg ttctaaaatg caaaagacac actacatggg
      181 ctttgctagc atgtctgctc ggggggtgtc ggtcgtcaaa gcgtcaacgc acataaccac
      241 accgcgacaa ccaggcgata agggcaaacc acatgaaagt aaaagacaag catctggtga
      301 tggtcactgg cggtgcacgc ggtattgggg ccgatatcgt tgatcgcgtg gcgcgccggg
      361 aataccccgt gtgtttcagt tacctgtcac gcgacaaaga ggccagtgac ctcgttgcac
      421 gtctgcaggc acaaggctgt tcggttgcgg gcattcgttc cgatgtcagc cgatctgaag
      481 acatcgaaga tttttttgca caagcgcaac aaacctttgg tccactcggc ggttttgtta
      541 ataacgctgg ctacgtcggt cgtgccggac gcgaggtgtc taatctggac catgacacgc
      601 tcagacgctg cttcgatgtc aacgccatcg gacccatcat gtgttcgcag cttgcactgc
      661 aacagttatc aaccgtcaac ggcggttcgg gcggtcgcat catcaatgtc tcctcgattg
      721 ctgctcgcac gggcagtcca tgggattggg ttgattatgc tgcctccaag ggcgccttga
      781 acacgttcac ggtggggttt ggtaaggagg tggccaaaca aggcgttcaa gtcattggcg
      841 tgggacctgg tggcgttgcc accgaactac acacgcaagc gggacaaccc gagcggttgg
      901 cgcggttttg tgacatcaca ccgattggcc gacccgctga gtctgcggag attgcggacg
      961 tggtggtttg ggctctgcta gatgctccag actacctgac agctaccacc attgaggtct
     1021 cgggtggtct ttgagattcg ccgctagctt gatactggcg cttctattta gctaatgccc
     1081 aattaaatgc gcaacgatcg tcggtcccac taatgcagag atgcctgagc atgtctacgc
     1141 tcaagcaact gagatgacct gccatcggtg cggtgcacat gctgagctgc aatgcgtgaa
     1201 ctgccaaacg ctatgcaacc acccgttgcg cttggccaat ttcctggaca taagccggtg
     1261 ccggatgtgc cgttaggcga tgccctgctt ttaggatttg actcggtaca tcgtgttgca
     1321 cgaggttagg caacatggcc gagacagcca tgagtttggc caagtccact cccgtatcaa
     1381 aaccttccaa ctccaacatg tgcacgactt cttcagtgca agcattgcca ctggcacccg
     1441 gtgcgtaagg gcaaccacca atgccaccca acgcagcatc aaaccgatca atgccagcat
     1501 caatggcagc caacacattg gactgtgcca aacctcgtgt gttgtgaaag tgcagtgtga
     1561 aagtcatctc aggatagttg gctttggcct tacggcacag cttacgaacc tgcgacggaa
     1621 atgccatacc agtggtatca cacagactga tacgcttgac accctggcgt gcgaagttgt
     1681 caaccaagcg caagatttct gactcagcaa tctcaccttc cattggacaa ccgaatgccg
     1741 ttgacaacga tacattcacc gccacgcgct tgttgaccga ggatcgcgtt tgcaatactt
     1801 caatgacctg acccaactgc gcgagtgact gctcgcgagt catgcgcagg ttggcacggt
     1861 tgtgggtttc actaaccgac atcaccaaat tcgcttcatc aatgccgcaa gctagcgcac
     1921 gttcagcacc acgcacattg gggattaata cggtgtattc aacaccgggc gcacgcacga
     1981 tctcatgcat cacatcttct gcatcacgca atgccggaat ggccttgggt gaagtaaaag
     2041 atgtcgcctc aatcttcgcg aaaccgcact gactcagggc attgataaat gcaattttgt
     2101 cggcggtttc aatgaagacg gattcgtttt gaaatccatc acgcggcgac acatcatgca
     2161 tgtatatacg gggtttggcc atgccggtat ctccgggtcg taaacactaa tcctatattg
     2221 taagggtttt tccggataag cctttgtgca atgcagcaat gtggtgcatg catgcaccac
     2281 aaagggatcc tttaggatcc ctttgtggtt gtcactgcca gtcgtgttta cgattaggct
     2341 agcggttgag cacgcagtca gctctgcggt tagacctgta cttgaccttg tcggcgtctt
     2401 agcatttttg tgaaatgact gccgctagac gctcggtcag cagcacgatc aatacagtgt
     2461 cctcaagccg tcaaacaacc tcaaccttaa gctcacccaa accctcgaag gaaccgacca
     2521 tggtgtcacc cgccaccaca gcacccacgc cctcgggcgt gccagtaaag ataaggtcac
     2581 cggctttcag ttcaaacaga cccgacaagt aagcaatgct ctcgggaata ttccagatca
     2641 gttgatcgag gttgctgtct tgcttggttt ggccgtttac tgaaagtgca attcgacctg
     2701 cgtttaacac cccggtcttt gcgaccggat ggatgggacc gataggcccg ctctcatcaa
     2761 acgctttacc cacttcccat ggcctgccct gcttcttagc ttcaccttgc aggtcacggc
     2821 gtgtcatgtc caaaccgagc gcgtaaccat agatgtgagc ttgtgcttgg tcgacagaaa
     2881 tgtctttgcc gccactacca agcgccacca ccagttccat ttcgtaatgc aggttactgg
     2941 tctttggtgg gtagtgaatc tggccttgct caccatctgg caccaccacc aacgcatcgg
     3001 ctggcttgca aaagaaaaac ggatcttcac gcccggtgaa acccatctct ttggcgtgct
     3061 cggcatagtt acgccccaca caaaacaccc gacgtacggc aaatgactgc ttgctgccga
     3121 ctactggaat gcccaccacc gcgggaggcg caaatacaaa atcagacatg acgctgtcct
     3181 tgttcaatca aaattaacct gccccgattc tagcggagag aatctgttgg ggtgttgtcg
     3241 gggttttggg ttacacggcc gttgacatcc accccgcccc accattgcaa acgacaacga
     3301 ttcctagcgg ctttatcaag ccgccaagat tggacgtgta tcgctacttc ccaatggttc
     3361 ctgcctcatc gttaaaacca acgttttaac tccacaggcg agcacccgat gccctcgggc
     3421 tagtacattt aacgcaccca ccaagtcggc gttttccgta taaccgcatg caacacattt
     3481 aaatcttgat tgtgaggtgc ggttgtcttt gctgacacgg tggcattctg ggcaggtctg
     3541 cgacgtgtgc tagcagcttg acgtggactc atgcaaattg aagtttagaa cttcaatttg
     3601 catagactaa cgcaatgtca ctgattttga gcatgacatc ggaactttag cgaagacgcg
     3661 aatacgtttt gggtgcaaag aaacacataa aaatgagcga cttggctcag gccaagtcgc
     3721 tcatattgtc attcgttgtt gtagctagct ttcatcgact gtcattgttg accaaagccg
     3781 ccttgcaaac catagtacaa ccacggttgc aaccgcagct ataacctatg tcgccactta
     3841 cgttgcaacc gcgggcttgt cagtgactgg catcgtatct gcattgccat ctttaccgtc
     3901 tttgccgcca ctgccatttg ggccaccgct gccaccgcca tcatcctcac catcttcgcc
     3961 ttcatcttcg agcatgccag ctttgaagaa cttcatgatc ttcacaaaga agaccgggac
     4021 gatggccaca gccaacgtgg tagaggcgat catgccactg aacaccgtga tgccgatcga
     4081 gaactgtgag acagcaccgg cacctgaagc cagtaccagt ggcaccacac cgagaatgaa
     4141 ggctatcgag gtcatcacga tcggacggaa tcgttcgtgt gatgcgtgca aggcggcctc
     4201 ttcataggtc atgccattgc gcaacccttc aattgccact tcgacaatca aaatcgcgtt
     4261 cttggccgat aacgcaatca tcagcaccat gccgatctgc acatagatgt tgttggcaaa
     4321 gccaatcgac aagagtgcca ccacaatgcc tgagagtgcc aatggcacgg cactaagcac
     4381 ggcgatcggt gctgcccatg actcgtattg accggcgagc acgagataaa cgagcaagat
     4441 cgacagggca aacaccag
//
LOCUS       DATBNL010000573         2322 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_126484, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000573 DATBNL010000000
VERSION     DATBNL010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126484"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2322)
                     /gene="gcvP"
                     /locus_tag="VIC30_09930"
     CDS             complement(<1..>2322)
                     /gene="gcvP"
                     /locus_tag="VIC30_09930"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEY7804734.1"
                     /translation="VADLTGLDIANASLLDEGTAAAEAMTLAWRVTRHKERPFFVSQH
                     CHPQTIEVVKTRAEGLGIDLVIGDEATGVPSCFGVLLQYPQTLGEVMDYRALAAQVHD
                     DDGVVACATDLLALTLLEAPGHWGADIAIGSAQRFGVPLGAGGPHAAFMSCKDAYKRN
                     LPGRLVGVSRDAMGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYALWHGP
                     EGLKAIARRVHQHTAAMRSGLEQLGFVVKNHGFFDTLLVQTGEHTAAIHEACEQASMN
                     LRHVSSDSLALSLDETVTADDVLALLAVFAGVVGKTPQSKQSLQPSWPEGQSLPGIAD
                     TLQRQGEILTHEVFHSIQSETDMLRYLRRLSDKDLALDRTMIPLGSCTMKLNATVEMI
                     PVTWPEFANVHPFASASQAKGYQALIERLSAYLCEITGYDAISLQPNSGAQGEYAGLL
                     AIRAYHRSRGDHQRNICLIPESAHGTNPASANMVGMDVVVVRADAQGNVDVDHLKECI
                     AQAGDRLAALMVTYPSTHGVFEEAITEICDSIHEAGGQVYMDGANMNALVGVAQPGKF
                     GSDVSHLNLHKTFCIPHGGGGPGVGPVGCRAHLAPFLPGVVGADGRLPADAPVGPVSA
                     APFGSASILPISMAYILLMGAHGLRQATETAILSTNYIAKRLAPHYPILYTNKAGRVA
                     HECILDMRPLKDETGISGEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELDR
                     FIDAMIAIRAEIEQVAKGERDANDNVLKNAPHTA"
BASE COUNT          544 a          691 c          612 g          475 t
ORIGIN      
        1 gcggtgtgcg gggcattctt aagcacattg tcattggcat cacgctcgcc ttttgcaact
       61 tgctcgatct cagctcggat ggcaatcatg gcatcgatga agcgatcgag ttcagccaag
      121 ccttcggact cggtaggttc aaccatcaag gtgccggcta ctgggaacga catcgttggt
      181 gcatgaaacc cataatccat caggcgcttg gcgatgtctt cgcccgagat gcctgtttcg
      241 tcttttaaag gccgcatgtc taagatgcac tcatgcgcca cgcgcccggc tttgttggta
      301 tacagaatcg ggtaatgtgg tgccagacgt ttggcgatgt agttggtgct cagaatcgca
      361 gtctctgtgg cttggcgcaa accatgtgca cccatcaaca aaatgtacgc catggagatc
      421 ggcaagatac tggccgaacc aaatggtgcg gcactgaccg ggccgacagg cgcgtcagcc
      481 ggcagacggc catcagcacc aacaacgccg ggcaagaaag gtgccagatg tgcgcggcag
      541 cccacagggc ccacacccgg gccgcccccg ccgtgcggaa tacaaaacgt cttatgcaaa
      601 ttcaaatgcg agacatctga accaaatttg ccgggctggg ccacgcccac caaggcattc
      661 atgttggcac catccatgta gacctgaccg cctgcttcat gaatcgagtc gcagatctcg
      721 gtgatggctt cttcaaacac accatgtgtc gatgggtaag tcaccatcag tgcggcaagt
      781 cggtcgccag cttgtgcaat gcattctttc aaatgatcga catcgacatt gccctgtgcg
      841 tcagcgcgca ccaccacaac atccatgccc accatgttgg cagaagccgg gttggtgcca
      901 tgggcagact caggaatcaa gcaaatgttg cgctgatggt caccacgcga acggtggtag
      961 gcacgaatcg ccaacaggcc agcgtattca ccttgggcac cagagtttgg ctgcaaacta
     1021 atggcgtcgt agcctgtaat ctcacacaga taagccgaca ggcgctcgat caacgcctga
     1081 taacccttgg cttgcgaggc agatgcaaac ggatgcacat tcgcgaactc aggccaggtg
     1141 actgggatca tttccacggt cgcgttcagt ttcatggtgc atgagcccag cgggatcatg
     1201 gtgcgatcaa gcgccagatc cttgtcactc agacggcgca gatagcgcaa catgtcggtc
     1261 tctgactgaa tgctatgaaa cacctcatgc gtcaatatct ctccctgacg ctgcaatgtg
     1321 tcggcaatac cgggcagtga ttggccttcg ggccagctcg gttgcagaga ttgcttggat
     1381 tgcggtgttt taccaaccac accagcaaat accgctaaca gcgccaacac gtcatctgca
     1441 gttaccgtct catcgagcga gagcgccaag ctgtcacttg aaacatgacg caaattcatc
     1501 gatgcctgct cgcaagcttc atgaatggct gccgtgtgct cgccagtttg caccaatagc
     1561 gtgtcaaaaa agccatggtt tttaaccaca aaaccgagct gttcaagacc cgaacgcata
     1621 gcagcggtat gttgatgcac acgacgtgcg atggctttca gaccctcagg gccatgccac
     1681 aaggcataca tgctggccat caccgccaac aacacctgtg cggtgcagat gttcgatgtc
     1741 gctttctctc gccggatgtg ttgctcgcgc gtttgcaatg ccaaacgcaa ggccggattg
     1801 cccatggcat cacgcgacac accgaccaaa cgtccaggaa ggttacgctt ataggcgtct
     1861 ttgcagctca tgaaggcggc atgggggcca ccggcgccca acggcacgcc aaaccgctgt
     1921 gctgagccga tcgcaatgtc agcaccccag tggccaggtg cttcgagcaa cgtcagtgcc
     1981 agcaagtccg tggcgcaagc aaccacacca tcgtcgtcat gcacctgtgc tgccagcgca
     2041 cgataatcca tcacctcgcc caaggtttgc gggtattgca acagcacccc aaaacaactc
     2101 ggcaccccgg ttgcttcatc accgatcaca agatcaatgc ctagcccctc ggcgcgggtc
     2161 ttcaccacct caatggtctg cggatggcaa tgctgcgaca caaagaaagg ccgctctttg
     2221 tggcgcgtta cccgccaggc caaagtcatg gcttcagccg ctgccgtacc ttcgtctaac
     2281 agtgaggcat tggcaatatc aagcccggtt aaatcagcca cc
//
LOCUS       DATBNL010000574         3459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_66868, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000574 DATBNL010000000
VERSION     DATBNL010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66868"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..166)
                     /locus_tag="VIC30_09935"
     CDS             complement(<1..166)
                     /locus_tag="VIC30_09935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020701124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7804735.1"
                     /translation="MTGLAAPVASCVLERDSVRLEPLTAEHAPALQAAASDGQLWRLR
                     VTSVPEPQATD"
     gene            complement(163..1047)
                     /locus_tag="VIC30_09940"
     CDS             complement(163..1047)
                     /locus_tag="VIC30_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY7804736.1"
                     /translation="MTFVTNSKQDNSRFDGSERYVATEDLKLAVNAALTLQRPLLIKG
                     EPGTGKTMLAEEVAAALGRPLLQWHIKSTTKAHQGLYEYDAVSRLRDSQLGDERVKDI
                     ANYIVKGVLWQAFVSDVPTVLLIDEIDKADIEFPNDLLREIDEMAFHVYETHETIQAK
                     HRPLVIITSNNEKDLPDAFLRRCFFHYIRFPDRETLKSIVAVHYPNLHADVLKACLDA
                     FFALREAPGLKKKPSTSEFLDWLRLLIAEDVSADEIQAHNATSVPILAGALLKNEQDV
                     QLLERLAAVTRNTTRRQP"
     gene            1185..1562
                     /locus_tag="VIC30_09945"
     CDS             1185..1562
                     /locus_tag="VIC30_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008248675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY7804737.1"
                     /translation="MNLSLHAVPKIVRRTARKSALGAACAIAIGFSGAAMANEPVKGD
                     IEAGSQKVSMCIGCHGIPGYKASFPEVYAVPMIAGQNEQYIIVALRAYASGERTHPTM
                     DAISSSLSEQDMADLAAYYANLK"
     gene            1582..1938
                     /locus_tag="VIC30_09950"
     CDS             1582..1938
                     /locus_tag="VIC30_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7804738.1"
                     /translation="MIATSVFVLATGVFAAGAQAANLQEGQAVWERLNCASCHGAEAA
                     KAIDPSYPILAGQHADYLEHALISYQRGARGLPPSANVRNNAIMSAFAMQMSKQDIDN
                     VSAWLASLPSPLSVKK"
     gene            complement(2038..2472)
                     /locus_tag="VIC30_09955"
     CDS             complement(2038..2472)
                     /locus_tag="VIC30_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEY7804739.1"
                     /translation="MFNPSREQVRSFFIEAWQKRQKNMVLTPLDTMAADLVEMHPEYM
                     QDLQSPQALTKDYSVEQGRTNPFLHLSMHLAIAEQISIDHPPGIRDAYAKLAARHGEH
                     DAIHEIMECLGQVVWEAQRLGTPLDNDTYLDLLQRRATKTGH"
     gene            2545..>3459
                     /gene="icd"
                     /locus_tag="VIC30_09960"
     CDS             2545..>3459
                     /gene="icd"
                     /locus_tag="VIC30_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003821191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEY7804740.1"
                     /translation="MTYQHIKVPSAGKKITVNADFSLNVPDEPIIPYIEGDGTGMDIT
                     PVMLKVVDAAVAKAYAGKRKIHWMEVYAGEKSTQVYGPDVWLPEETMEAVKDYVVSIK
                     GPLTTPVGGGIRSLNVALRQQLDLYVCLRPVRYFKGVPSPLREPEKTNMVIFRENSED
                     IYAGIEFAAESEQAKALIEFLQNKLGVNKIRFPNTSGIGVKPVSREGTERLVRKAIQY
                     AIDNDRSSVTLVHKGNIMKFTEGGFRDWGYDLAQKEFGAEMIDGGPWCKFKNPKTGRD
                     IVVKDSIADAFLQQILLRPAEYDVIATLN"
BASE COUNT          774 a          880 c          963 g          842 t
ORIGIN      
        1 cgtcggtcgc ttgaggttcg ggcaccgagg tcacccgtaa gcgccagagt tgcccgtcgc
       61 tcgcagccgc ttgaagtgcc ggggcgtgtt cagctgttaa cggctcaagc cgcactgagt
      121 cgcgctcgag cacacagctg gccacaggtg ctgcgagccc cgtcatggct ggcggcgggt
      181 ggtgtttcgt gtgactgccg caagacgctc aagcagttgc acatcttgtt cgtttttaag
      241 cagcgcacct gccaatatcg gcaccgatgt cgcgttgtgc gcttgaatct cgtcggcgct
      301 gacgtcctcg gctatcagta accgcaacca gtcgagaaac tcggaagttg agggtttttt
      361 cttcaagcca ggcgcttcgc gtagggcaaa aaatgcatct aggcatgcct tgagtacatc
      421 agcatgcagg ttcgggtagt gcaccgcgac aatcgacttt aaagtctcgc gatctggaaa
      481 gcggatgtag tgaaaaaagc agcgtcgtaa aaaggcgtca ggcaggtctt tttcattgtt
      541 ggaggtgatg atgacaagcg ggcggtgctt ggcttgaatg gtttcatgtg tttcgtagac
      601 atgaaacgcc atctcatcga tttcacgcag caggtcattg ggaaactcga tgtcggcttt
      661 gtcgatctca tcaatgagca agaccgttgg tacatccgag acaaacgctt gccacaacac
      721 gcctttgacg atgtagttgg cgatgtcttt gacgcgttcg tcgccaagtt gtgaatcgcg
      781 caagcgcgaa accgcatcgt attcgtataa accctgatgt gctttggtgg tggatttgat
      841 gtgccactgc agcaaagggc gaccgagtgc ggcggccact tcttcggcca gcatggtctt
      901 gccggtgcca ggttcgcctt tgattaaaag ggggcgctgc agtgttagcg cggcattgac
      961 ggcgagtttc aggtcctcgg ttgctacata gcgttcggac ccgtcaaagc ggctgttgtc
     1021 ttgcttactg ttggttacaa aggtcattgt gggtgagttc ctacaacaaa aatgatgagc
     1081 ttgcctatat cgagatcaac aattatcgta caatccgtaa aattttctcg agtactgcct
     1141 tgagtaactt gcaccgattc gtctcataac taaagagtga acacatgaac ctgtcacttc
     1201 atgccgtacc aaaaattgtt cgtcggacag cgcgtaaatc cgcacttggc gctgcctgtg
     1261 cgatcgccat cggcttttct ggcgccgcca tggccaacga gccagtcaag ggagacattg
     1321 aggcgggtag ccagaaagtc tccatgtgta tcggctgtca cggcattccc ggttacaaag
     1381 cgagcttccc tgaggtctac gctgtgccga tgattgctgg gcaaaatgaa cagtacatca
     1441 ttgtcgcgct tcgtgcctat gcttcaggcg agcgcacaca cccgaccatg gacgccattt
     1501 cttcgagcct gtctgagcaa gacatggccg atttggcagc ttattacgcg aatttgaagt
     1561 aaggcggacc acaacatgaa aatgattgcg accagcgttt ttgttttagc taccggcgta
     1621 tttgcagcgg gtgctcaagc agctaacctg caagaagggc aagccgtctg ggagcgcttg
     1681 aactgcgctt cctgtcacgg tgcagaggct gccaaggcga ttgacccaag ctacccgata
     1741 ctggccggcc agcacgcgga ttatctcgag catgccctga tttcttacca gcgcggtgcg
     1801 cgtggtttgc ccccatcagc caatgtgcgt aacaacgcca tcatgtcagc gttcgccatg
     1861 caaatgtcta aacaagacat tgataacgtc tcggcatggt tagcgtcact gccgtcaccg
     1921 ctgtcagtca agaagtagtt gctagatagc cgcgagactg actgagtcaa tgcagtcagc
     1981 agacactgcg agttgtgatt aacgcaatag cgctacccac atgttcaaaa accggcctca
     2041 gtggccggtt tttgttgccc ggcgctgcaa caaatcgagg taagtgtcat tgtctagcgg
     2101 ggtgcccagg cgctgcgcct cccaaacgac ttgtcccagg cattccatga tttcatggat
     2161 ggcgtcgtgc tcaccgtggc gtgcggctag tttggcgtaa gcgtctcgga tgcccggtgg
     2221 gtgatcaatg gaaatttgtt cggcaatggc caagtgcatc gatagatgca aaaacgggtt
     2281 ggtgcggcct tgctcgacgc tatagtcctt tgtcagtgcc tgtgggcttt gtaggtcctg
     2341 catgtactct ggatgcatct ctacgaggtc tgcagccatg gtgtccagtg gtgttaacac
     2401 catgtttttt tgacgttttt gccaagcttc aatgaagaag cttcggacct gttcgcggct
     2461 agggttgaac atagtctgcc ttaagttgtg atgcgcgtta aaataatcaa ttctctaacc
     2521 ccgatttcgc ggagcgatcc atccatgaca taccagcata tcaaagtgcc cagcgccggc
     2581 aaaaagatca ccgtcaatgc ggatttttca ttaaatgtcc ctgacgaacc cattattccc
     2641 tacatcgagg gtgacggcac gggtatggat attacgcctg tcatgcttaa agtggtcgat
     2701 gccgctgtgg ccaaagccta cgctggcaag cgcaagattc actggatgga agtttacgca
     2761 ggcgagaagt caacacaggt ctatggccct gacgtttggc tgccagaaga gacaatggaa
     2821 gccgtgaaag actatgtggt ttcgatcaag ggtccgctga caaccccagt tggcggcggt
     2881 atccgttcgt taaacgtggc tttgcgtcaa cagcttgacc tctacgtctg tctgcgtccg
     2941 gtgcgctact tcaagggcgt gccttcaccg ttgcgtgagc ctgagaagac caacatggtc
     3001 atcttccgtg aaaactcaga agacatctac gccggtattg agtttgccgc tgagtcagag
     3061 caggctaagg cgttgatcga gttcttgcag aacaagcttg gcgtgaacaa gattcgcttc
     3121 cccaacacgt ctggtattgg tgttaagcct gtgtcacgtg agggtactga gcgcttggtg
     3181 cgcaaggcca tccaatacgc gatcgacaat gaccgcagct cggttacctt ggtgcacaag
     3241 ggcaacatca tgaagttcac cgaaggtggc tttcgcgatt ggggctacga tctggcacaa
     3301 aaagagttcg gtgctgagat gattgatggc ggcccatggt gcaagttcaa gaaccctaaa
     3361 acgggtcgcg acatcgtcgt caaggacagc atcgctgatg cattcttgca gcaaattctg
     3421 ttgcgtcctg ccgaatatga cgtcattgcc acgttgaac
//
LOCUS       DATBNL010000575         2753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_16574, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000575 DATBNL010000000
VERSION     DATBNL010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16574"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /gene="aceA"
                     /locus_tag="VIC30_09965"
     CDS             <1..903
                     /gene="aceA"
                     /locus_tag="VIC30_09965"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HEY7804741.1"
                     /translation="EGKNPGEEGYIDFLAPIIADAEAGFGGVLNAFELMKSMIEAGAS
                     GVHFEDQLASVKQCGHMGGKVLVPTREAVSKLTAARLAADVMGTPTILLARTDADAAD
                     LVTSDIDENDRPFMTGERTVEGFFRTKAGIEQGISRGLAYAPYADLIWCATATPNLDY
                     ARQFAEAIHRQFPGKLLAYNCSPSFNWKKNLDDDTINKFQRELGAMGYKFQFITLAGF
                     HALNYGMFDLAYKYARENMTAFVELQQKEFAAADRGFTAVKHQREVGTGYFDAVTQTI
                     EGGQASTTALTGSTEEAQFESEKA"
     gene            1081..2043
                     /locus_tag="VIC30_09970"
     CDS             1081..2043
                     /locus_tag="VIC30_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006390534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804742.1"
                     /translation="MPKSIFALNRPLSDDEMMSRRRSLVRLGLAWLAMMQVMMFALPG
                     YLRQDSFGQDSLEVLDWAIVLMNWASLALTVPVILYSAWPVWRGVGQAWQERHITMDV
                     PVAVSMIAAFVPSFIATIVGHGEVYFDSVTMFVAFLLTARFFELRARQSVDDSRHFHT
                     LEELRSPLLAHADKVAMWFVTVQLAIAFIVAMIWWVLDPAYALPVMVSLLVMSCPCAL
                     SMSAPVSLAAANATLAAYPDMTQDQADRLFAGARRITKLNLYGSVIFHLITTPLAAFG
                     LVTPWLAALGMFVSSIAVTANAWRLYREPAPGVTASNVSGLART"
     gene            2055..2204
                     /gene="ccoS"
                     /locus_tag="VIC30_09975"
     CDS             2055..2204
                     /gene="ccoS"
                     /locus_tag="VIC30_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006220458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEY7804743.1"
                     /translation="MEILYLLLPLSLVVVALIGVVLWWAIFSGQYDDPDKASRTILED
                     DDTPK"
     gene            2361..>2753
                     /locus_tag="VIC30_09980"
     CDS             2361..>2753
                     /locus_tag="VIC30_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003268388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEY7804744.1"
                     /translation="MASAQATVAGGLQPAATTGSAAKAATAETFNYKVVRQFAIMTVV
                     WGVVGMAVGVLIAAQMMWPALNFDTPWLTFGRLRPLHTNAVIFAFGGSALFAASYYVV
                     QRTSQVRLFSDKLAAFTFWGWQAVIVGAV"
BASE COUNT          551 a          711 c          801 g          690 t
ORIGIN      
        1 gaaggtaaga acccaggtga ggaaggttac atcgactttc tggcaccgat cattgccgat
       61 gccgaggccg gtttcggtgg tgttttgaat gctttcgagt tgatgaagtc catgatcgag
      121 gccggtgcca gcggtgtgca ctttgaagat cagctggctt cggtcaagca gtgtggtcac
      181 atgggtggca aggtgctggt tccaacccgc gaggctgtga gcaaactgac cgctgcgcgt
      241 ctggccgctg acgtcatggg cacgccgaca atcctgttgg cacgtaccga cgctgatgcc
      301 gctgatttgg tgacgagtga catcgatgag aacgatcgtc cgttcatgac cggtgagcgc
      361 accgtggagg gctttttccg gaccaaggct ggtatcgagc aaggcatctc ccgcggtttg
      421 gcctacgcac cgtatgctga cctcatctgg tgtgcgacag ccacgcctaa tcttgactat
      481 gctcgccagt tcgccgaagc gatccaccgt cagttcccag gtaagcttct ggcctacaac
      541 tgctcacctt cgtttaactg gaagaaaaac ttggatgatg acaccatcaa caagttccag
      601 cgcgagttgg gtgccatggg ctacaagttc cagttcatca cgcttgccgg tttccatgct
      661 ttgaactatg gcatgttcga tctggcatac aagtatgcac gtgagaacat gacggcattt
      721 gtcgagttgc aacaaaaaga gtttgccgca gccgatcgtg gcttcacggc ggtcaagcac
      781 cagcgtgaag tgggtaccgg ttactttgat gccgtgacac agacgatcga aggcggtcaa
      841 gcatcaacca ccgcattgac cggctcaacg gaagaggcgc aattcgaatc agaaaaagcc
      901 taaggtccta atgccaatta gatcctggcc tattggcgta ttttccaaga gaaggatcgg
      961 gtaagtgtga agcaaacggc cgcggcaatc gcggccgttt gtgtttgggt gcgtgccaga
     1021 cgaattaaaa gttgatgtaa atcaaggtcg gcaatgcctg tcttggctag tatttcatcc
     1081 atgccaaagt caatcttcgc cttaaatcgc cccctgtctg atgacgagat gatgtcgcga
     1141 cgtcgctcgc tagttcgcct tggattggcg tggctggcga tgatgcaagt gatgatgttt
     1201 gcgctgcccg gctacctgcg ccaggacagt ttcggtcaag acagtctcga ggtgctggat
     1261 tgggcgattg tattgatgaa ctgggcaagt ctggcactaa cggtgccagt gattctctat
     1321 tctgcttggc cagtctggcg cggcgtgggg caagcttggc aagagcgaca catcaccatg
     1381 gatgtgccgg tggctgtgag catgatcgcc gcctttgtcc cgagctttat cgccacgatc
     1441 gtgggtcacg gcgaggtgta tttcgactcg gtaaccatgt ttgtggcgtt cttgttaacc
     1501 gcccggttct ttgaattgcg agccagacag tcggttgacg attcccgtca ttttcatacg
     1561 cttgaagagt tgcgcagccc tttgctggct catgccgaca aggtggccat gtggtttgtg
     1621 actgtgcaac tggcgattgc gttcattgtc gcgatgatct ggtgggtgct tgatccggct
     1681 tatgctttgc cggtgatggt ctcactgctg gtcatgagtt gcccgtgtgc gctgtcgatg
     1741 tcagcaccgg tctcgctggc cgcggccaac gccactttgg ctgcttaccc tgacatgacg
     1801 caagaccaag cggatcggtt gttcgctggt gcaagacgca tcaccaagct aaacctctac
     1861 ggctccgtga tttttcacct gattacgaca ccgttggcgg ccttcgggtt ggtcacgccc
     1921 tggctggcag cactcggtat gtttgtctct tcgattgcgg tcaccgccaa cgcatggcgc
     1981 ctttatcgtg aaccagcacc gggcgtgact gcgtctaacg tgtctggcct ggctcgaaca
     2041 taaaaggcag cgttttggaa attctctacc tcctgttgcc actgtctttg gtggttgtcg
     2101 cgctcatcgg tgtggtgttg tggtgggcca ttttttctgg tcagtatgac gaccctgaca
     2161 aggccagtcg caccattttg gaagacgacg acacgccaaa gtgatgcctc aaagtaatgc
     2221 ctcaaagtga tgccccaaag tgatgcccca aagtgatgcc ccaaagtaat acccattgat
     2281 gcagatcaat acgcccatct cgattgatct gcatcatgct aaccaagact ttttatcatt
     2341 tcattcgagg actaaaaacc atggctagcg ctcaagcgac ggtggctgga gggttgcaac
     2401 cagcagcgac cacagggtcg gcggcaaagg ctgccaccgc ggagacattt aactataagg
     2461 tggtccgtca gtttgcgatc atgacggttg tttggggtgt ggtcggcatg gcagtcggcg
     2521 tactgattgc cgcacaaatg atgtggccgg cactgaactt tgacacacct tggctgacct
     2581 ttggtcgctt gcgcccgttg cacaccaacg cggtgatttt tgcgtttggt ggcagcgcct
     2641 tgttcgcggc ttcctattat gttgtgcagc gcacctcgca ggtcaggctg ttctcggaca
     2701 agctcgctgc gttcaccttc tggggttggc aggcggtcat cgtgggtgcg gtc
//
LOCUS       DATBNL010000576         1724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_46791, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000576 DATBNL010000000
VERSION     DATBNL010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46791"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /gene="rfbC"
                     /locus_tag="VIC30_09985"
     CDS             <1..301
                     /gene="rfbC"
                     /locus_tag="VIC30_09985"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017332879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEY7804745.1"
                     /translation="DIRPNSPTFGQWTGHHLSAQNKQQLWVPPGLAHGFVVLSQTAEF
                     LYKTTDYYSPDYERSLVWNDPDLAIDWPMDFEPTLSNKDQPGQALTLAQWRSMQG"
     gene            312..1514
                     /locus_tag="VIC30_09990"
     CDS             312..1514
                     /locus_tag="VIC30_09990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804746.1"
                     /translation="MHQNANHNIKPKLLVSLSSHGFGHLAQVAPVIAATQRLIDQGLA
                     PAFDLTVRTTLAHSQLKSRIVRSFQYDKGCDDIGMLMHDALTVDLNRSLLAYATLHRQ
                     WQRCIDNLAQHLYAHHYSGVLTNTPYLTLAAAHAAGIPAMAICSLNWADILEGCVRQD
                     KESLAHANISKPEFSAMLQQIRDAYGLATTVVRPAPFMGQPARQPLDIEPIAPPPQLS
                     NRAALIDQIAIKLPNPWVVLVSMGGMALELQPSQWPTSLLGRSVIYLTHAGLAQVDKP
                     AKQLPHVMSYESLGMRFTEIMASCDLVLTKPGYGMFVETRTHGKPMLYVARDQWPETD
                     YLVQWANTNTHASQLTPTQLATGQFVAEMTDVLTAPAMTPVNFSGADVAARTWMNTMF
                     GYGQGSQG"
BASE COUNT          409 a          502 c          440 g          373 t
ORIGIN      
        1 ggatatccga ccaaactcac cgacctttgg tcagtggacc ggccatcact taagtgctca
       61 gaataagcaa cagctttggg tgccgcctgg tctggcccat ggctttgtgg tgctcagtca
      121 aacggccgag tttctctaca aaaccacgga ctactattcc cccgattacg aacgtagcct
      181 ggtgtggaat gacccagatc tggccatcga ctggcccatg gattttgagc cgacactgtc
      241 aaacaaagac caacctggcc aggctttgac gctggcacaa tggcgatcga tgcaaggctg
      301 atcccaaagt catgcaccaa aacgccaacc acaacatcaa acccaaactc ctggtatcgc
      361 tctcatcaca cgggtttggg cacttggctc aagtggcacc ggtgattgca gccacacagc
      421 gattgattga ccaaggtctg gcgccagcgt ttgatctgac ggtgcgtacg accttagccc
      481 acagccagtt aaagtcgcgc atcgtgcgct catttcaata cgacaagggt tgtgacgaca
      541 tcggcatgct gatgcacgac gcgctgacgg ttgatctgaa ccgctctttg cttgcctatg
      601 ccaccttgca tcggcagtgg cagcgctgca tcgataatct ggcccagcat ctgtacgccc
      661 atcactacag tggcgtacta accaacacgc cttacctgac attggcagcc gcgcatgccg
      721 ctggcatccc cgcgatggcg atttgctctt taaattgggc ggatattctt gaaggatgtg
      781 tgcgccagga taaagagtcg ttagcacacg ccaacatctc aaaacctgag ttcagtgcca
      841 tgctgcagca aatacgcgat gcatacggtt tagccacgac agtcgtgcga cctgcaccgt
      901 ttatgggcca gccagcacgc cagccactag atatcgagcc cattgcccca cccccacagc
      961 tgtccaatcg tgctgcgctc atcgaccaaa tagccatcaa gctgccaaac ccttgggtgg
     1021 tactagtcag catgggaggc atggcacttg agctgcagcc atcgcaatgg ccgacatccc
     1081 ttctggggcg ttcagtgatc tatctcaccc acgccggttt ggcgcaggtc gacaagccgg
     1141 ccaagcaatt gcctcacgtg atgtcgtatg agtcactggg catgcgtttt accgagatca
     1201 tggcctcgtg cgatttggtg ctgaccaaac ccggttatgg catgtttgtt gaaacacgca
     1261 cgcacggcaa acccatgctg tatgtggcac gcgatcaatg gcctgagacc gactacctgg
     1321 ttcaatgggc aaacaccaat acgcatgcaa gccaattaac gccaacacaa ctggccacgg
     1381 gtcaattcgt cgctgaaatg actgacgtgc taaccgcccc tgcgatgaca ccggttaact
     1441 ttagtggtgc agacgtcgct gctaggactt ggatgaatac gatgtttggg tacgggcaag
     1501 gcagtcaggg ctagtcagga cctaatcaga gactggtcag agactggtca gaaactaagc
     1561 agaaactact gactggccag tagcacgtgg ccatcaattt ggccgctggc agtcagcgcc
     1621 tgtatgagcg catgttgctg ttcggcacgt cgactcaaat caatctcaac catgttgcgg
     1681 ccatcgattt gctcttgacc caccacctcg ctattaaagg cctg
//
LOCUS       DATBNL010000577         1942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_6479, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000577 DATBNL010000000
VERSION     DATBNL010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6479"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VIC30_09995"
     CDS             complement(<1..273)
                     /locus_tag="VIC30_09995"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY7804747.1"
                     /translation="MMKRVLVTGINGFTGVYLAKVLAQAGWQVWGIGQAPTSHVTDNY
                     RCVDMLDRLALRQAIKEIAPNAVIHLAGVSAPAHGNVDWLYRVNITA"
     gene            complement(277..1311)
                     /gene="gmd"
                     /locus_tag="VIC30_10000"
     CDS             complement(277..1311)
                     /gene="gmd"
                     /locus_tag="VIC30_10000"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017423198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY7804748.1"
                     /translation="MKVAVITGITGQDGAYLAQYLLESGYRVYGTHRRTSSVNFWRIQ
                     ELGIDQHPELHLVDHDLTDLSSSIRLLEMSKATEVYNLAAMSFVGVSFEQPLTTADIT
                     GVGPVNMLEAIRIVNPAIRFYQASTSEMFGKVQEIPQVETTPFYPRSPYGAAKLFSHW
                     MTVNYRESYGIFAASGILFNHESPLRGQEFLTRKVSDSIAKLKLGKLDVLELGNLDAK
                     RDWGYAKEYVQGMWRMLQVDVPDTFVLATNRTESVRDFVTMAARAVDFDLQWQGSGES
                     EVGIDRASGRTLVRVNPKFYRPAEVDLLIGNPEKAKRDLGWVPQTTLEQLCQMMVEAD
                     LDRNQRGFSF"
     gene            complement(1441..>1942)
                     /locus_tag="VIC30_10005"
     CDS             complement(1441..>1942)
                     /locus_tag="VIC30_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804749.1"
                     /translation="TADGGVDEDVTSTAHPDNLRLAVDAARAIGLSVAGVDIMSVDLS
                     EPWHSNHAVVNEVNFSPLLGGGEISRSYLPQFFSRFVPDNGQIPLYHCSSREQALQTM
                     QACLADGVKCFCTADSYTLDDQFNVLPMTENTLNRRLKALCMRSDVQAIAVIDPGGRP
                     EVRPDT"
BASE COUNT          463 a          534 c          493 g          452 t
ORIGIN      
        1 tgcggtgatg ttgactcgat aaagccaatc tacattgccg tgggccgggg cagagacgcc
       61 agctaaatga atcacagcgt tgggcgcgat ctctttgatc gcttggcgca atgccaagcg
      121 atcaagcatg tccacgcaac ggtaattgtc tgtgacgtga ctcgtgggtg cctgaccaat
      181 accccatacc tgccagccag cttgggctaa caccttagcg agatataccc cggtaaagcc
      241 attaatgcca gtgaccagaa cacgtttcat catcaactag aaagaaaaac cgcgctggtt
      301 tcgatcaagg tctgcttcga ccatcatctg gcatagctgc tctagggtgg tttgtggcac
      361 ccagcccaga tcgcgtttgg ccttctctgg gttgccaatg agcaaatcca cttcggccgg
      421 acggtaaaac tttgggttga cgcgcaccag ggtgcgacca gatgcacggt caatgccgac
      481 ctcagactcg cccgagcctt gccattgcaa atcaaagtcc acggctcgtg ctgccatggt
      541 aacgaaatca cgcaccgact cggtgcggtt ggttgccagt acaaaggtgt ctggcacatc
      601 gacttgcagc atgcgccaca tgccttggac atattctttg gcgtaacccc agtcacgctt
      661 ggcatccaag ttgcccaact ccaggacatc caactttcct agcttgagct tagcaatgct
      721 gtctgacacc ttgcgggtca gaaactcttg gccccgaagt ggcgactcgt ggttaaacaa
      781 aataccgctg gccgcaaaaa tgccatagct ttctctgtaa ttcactgtca tccagtgcga
      841 aaaaagtttg gccgcaccat atggactgcg agggtaaaac ggtgtcgtct cgacttgcgg
      901 gatttcttgt accttgccaa acatctctga ggtgcttgcc tgatagaaac gaattgccgg
      961 attgacaatg cgaatcgctt cgagcatgtt caccggtccc accccagtga tgtctgcagt
     1021 ggtcagtggc tgctcaaacg acacaccgac aaagctcatg gctgcgaggt tatacacctc
     1081 cgtagccttg gacatctcga gtaaccggat actggacgat aagtcagtta agtcatggtc
     1141 aaccagatgc agttctgggt gttggtcaat accgagttcc tggatgcgcc aaaagttcac
     1201 cgaactggtt cggcgatgcg tgccgtagac tcggtaaccc gattccagca gatactgagc
     1261 aagataagcg ccatcttggc ccgtgatacc ggtaatcacc gctactttca tgtgtgtcct
     1321 tggtcgagaa tcaatattct gttttagagg gtgtaatgca accggttcgc gtaagcaatc
     1381 gatcggggct accccgggca atactataac ctgccgagtc ccatgggcat tttggtgcgc
     1441 ctatgtgtct gggcgcacct ctggacgccc ccctggatca atgacggcaa tggcctgaac
     1501 atcagagcgc atgcacaacg ccttaagtct cctgttaagc gtattttctg tcatcggtag
     1561 aacattaaat tgatcatcga gtgtgtaaga gtccgctgta caaaaacatt taacgccgtc
     1621 tgccagacaa gcttgcatgg tttgtagcgc ttgttctcga gacgaacagt ggtaaagcgg
     1681 aatttggcca ttatctggca cgaacctcga gaaaaactgt ggcaggtatg accttgaaat
     1741 ctcaccaccg ccaagcaatg gtgagaaatt aacctcgttt accacagcgt ggttgctgtg
     1801 ccacggctcg gataaatcta cgctcatgat gtcaacaccg gccaccgaca gcccgattgc
     1861 ccgcgcggca tccacagcca accgcagatt gtccgggtgt gccgtcgagg tcacatcctc
     1921 gtcgacccca ccatcagcgg tt
//
LOCUS       DATBNL010000578         1628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_16603, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000578 DATBNL010000000
VERSION     DATBNL010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16603"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1293
                     /gene="gltX"
                     /locus_tag="VIC30_10010"
     CDS             <1..1293
                     /gene="gltX"
                     /locus_tag="VIC30_10010"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEY7804750.1"
                     /translation="FVLRIEDTDLERSTPEAVQAILDGMAWLGFAPDEGPYYQMQRID
                     RYRQVIAQMVEAGTAYHCYSTPEEVDAMREAAKARGAKPRYDGTWRPEPGKTLPPAPE
                     GRKPVIRFKNPLSGVAVWEDLVKGTISIRNEELDDLIIARTDGTPTYNFCVVVDDWDM
                     EITHVIRGDDHVNNTPRQINILKALGAPVPAYGHVPMILGPDGQKLSKRHGAVNVMAY
                     DDQGYLPEAMVNYLARLGWSHADKEIFSREQLVQWFDGQNLSRSAAQWDPKKLNWVNS
                     HYIKEADNTWLADQICQRIVDRQGNPTAVDLAGAVGLLKDRSETLEQLADAAMLFCAA
                     PGQPDAELVAKHITDEAKQAVIDFWSQAQATDWTTPQIGQVIKATLGTHQLKMPQLAI
                     PLRLIVAGTPQTPAIDAVLALMGKERVGQRLRAFGLDV"
BASE COUNT          408 a          454 c          427 g          339 t
ORIGIN      
        1 ttcgttctac gcatcgaaga cacggatctc gaacgctcaa cgcccgaggc tgttcaggcg
       61 attcttgatg gcatggcgtg gttgggtttt gcgcctgacg agggtccgta ctaccaaatg
      121 cagcgcattg accgctaccg ccaagtaatt gcacagatgg tcgaggctgg tacggcctac
      181 cattgctaca gcacccctga agaagttgat gccatgcgcg aagcagccaa ggcccgtggt
      241 gctaagccac gttacgacgg cacttggcgc ccggaacctg gcaaaacatt gccgcccgca
      301 cccgaaggtc gcaagccggt gattcggttt aaaaatccgc tcagcggcgt agcggtctgg
      361 gaagacttgg tcaaaggcac cattagcatt cgcaacgaag aactcgatga cctgatcatc
      421 gcccgcacag atggcacacc cacctacaac ttctgtgtag tggttgatga ctgggacatg
      481 gagatcaccc atgtcatacg tggtgatgat cacgttaaca acacaccacg tcagatcaat
      541 attctcaaag cacttggtgc gccggtgccc gcttacggcc atgtgccaat gattctgggc
      601 ccagacggac agaagctctc taaacgacat ggcgccgtca acgtcatggc ctacgatgat
      661 caagggtacc tgccagaagc catggtcaat tatctggctc ggttaggctg gagccatgct
      721 gacaaggaaa tttttagtcg cgagcaactg gttcagtggt ttgatggaca gaacctctca
      781 cgctcagcgg ctcaatggga ccctaaaaaa ctcaactggg tcaacagcca ctatataaaa
      841 gaggctgaca acacctggct tgctgatcaa atctgccagc gtatcgttga cagacagggt
      901 aatccaacag ctgttgactt ggctggcgcg gttgggcttt tgaaggaccg cagcgaaaca
      961 ctcgaacagt tggccgatgc agccatgctc ttttgtgctg caccaggcca gcccgatgct
     1021 gagttggtcg ccaaacacat caccgacgaa gctaaacaag ccgttattga tttctggtcg
     1081 caagcacaag cgaccgactg gaccacacca caaattgggc aggtgattaa agccacgcta
     1141 ggcactcatc agctcaaaat gcctcaactg gccatcccgt tgcgactgat cgtggcggga
     1201 accccacaga cgcctgccat cgatgcagta ctggcactga tgggcaaaga gcgcgtaggt
     1261 caacgcctgc gggcgtttgg actggatgtc taacttagcg taggggaata cccgtaattc
     1321 tttagcggta actgactatt gcagtggcag taagtaaaca ctagaatttg ttggtcgatt
     1381 cacacaacac acaacatata gtgttttaat gaagatcatg tcgtgattta ttcgcggcat
     1441 ttttacgcca ccgatgacgc gcttagccca gcgcgccacg tcaagaagca ggagccccta
     1501 tgcaaattgc caacaccacc ccaagtgtcg acccgctcgg ccaagcccag gcgccgaccg
     1561 acgccagtac cgctgcaccc caaagtgcgt ggtcacatta cagtttgatt cgccgcaatg
     1621 gtgcggtc
//
LOCUS       DATBNL010000579         3795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_36882, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000579 DATBNL010000000
VERSION     DATBNL010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36882"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..256)
                     /gene="ccoS"
                     /locus_tag="VIC30_10015"
     CDS             complement(107..256)
                     /gene="ccoS"
                     /locus_tag="VIC30_10015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006220458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEY7804751.1"
                     /translation="MEILYLLLPLSLVVVALIGVVLWWAIFSGQYDDPDKASRTILED
                     DDTPK"
     gene            complement(268..1182)
                     /locus_tag="VIC30_10020"
     CDS             complement(268..1182)
                     /locus_tag="VIC30_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804752.1"
                     /translation="MMSRRRSLVRLGLAWLAMMQVMMFALPGYLRQDSFGQDSLDVLD
                     WAIVLMNWASLALTVPVILYSAWPVWRGVAQAWQERHITMDVPVAVSMIAAFVPSFIA
                     TIVGHGEVYFDSVTMFVAFLLTARFFELRARQSVDDSRHFHTLEELRSPLLAHADKVA
                     MWFVTVQLAIAFMVAMIWWVLDPAYALPVMVSLLVMSCPCALSMSAPVSLAATNATLA
                     AYPDMTQDQADRLFAGARRITKQNLYGSVIFHLITTPLAAFGLVTPWLAALGMFVSSI
                     AVTANAWRLYREPAPGVTASNVSGLART"
     gene            complement(1417..2724)
                     /gene="aceA"
                     /locus_tag="VIC30_10025"
     CDS             complement(1417..2724)
                     /gene="aceA"
                     /locus_tag="VIC30_10025"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HEY7804753.1"
                     /translation="MSTRESSIRDLQKDWAENPRWQGIKRDYSAEDVVRLRGSTMVEH
                     TLARQGSEKLWKLLNNEPFINTLGALTGNQAMQQIKAGLRAIYLSGWQVAGDANLAGE
                     MYPDQSLYPANSVPMVVRRINNALQRSDQIQWMEGKNPGEEGYIDFLAPIIADAEAGF
                     GGVLNAFELMKSMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVSKLTAARLAA
                     DVMGTPTILLARTDADAADLVTSDIDENDRPFMTGERTVEGFFRTKAGIDQGISRGLA
                     YAPYADLIWCETATPNLDYARQFAEAIHRQFPGKLLAYNCSPSFNWKKNLDDDTINKF
                     QRELGAMGYKFQFITLAGFHALNYGMFDLAYKYARENMTAFVELQQKEFAAADRGFTA
                     VKHQREVGTGYFDAVTQTIEGGQASTTALTGSTEEAQFEAEKA"
     gene            3006..>3795
                     /gene="queF"
                     /locus_tag="VIC30_10030"
     CDS             3006..>3795
                     /gene="queF"
                     /locus_tag="VIC30_10030"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR03138.1"
                     /note="Catalyzes the NADPH-dependent reduction of
                     7-cyano-7-deazaguanine (preQ0) to
                     7-aminomethyl-7-deazaguanine (preQ1) in queuosine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0043867 - 7-cyano-7-deazaguanine
                     tRNA-ribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEY7804754.1"
                     /translation="MNSSTHTTPQTTSLPTHDAALPLGKESTYPQRYEPALLYPIARA
                     LGRQAIGLTDQALPFIGWDLWRGYELSWLNAKGLPRTALLKVWVPATSGHIIESKSFK
                     LYLNSLNHDRIENVEQLTSRLEDDLSQAAGCTVKVQVLLPDDFTQEPIDEPGDAEHCL
                     DDQDIDITDYQPNAQLLRLAQTTGSVGTSVHERVFSRLLKSNCPVTGQPDWGSIHIEY
                     RGQPIDHAALLRYIVSFRQHQGFHEQCVEQMFCDIMRHCQPEALA"
BASE COUNT          939 a         1038 c          972 g          846 t
ORIGIN      
        1 agatcaatcg agatgggcgt attgatctgc atcaatgggt attactttgg ggcatcactt
       61 tggggcatca ctttggggca tcactttgag gcattacttt gaggcattac tttggcgtgt
      121 cgtcgtcttc caaaatggtg cgactggcct tatcggggtc gtcatactga ccagaaaaaa
      181 tggcccacca cagcaccaca ccgatgagtg cgacaaccac caaagacagt ggcaacagga
      241 gatacagtat ttccaaaacg ctgcctttta tgttcgagcc aggccagaca cgttagacgc
      301 agtcacgccc ggtgctggtt cacgataaag gcgccatgcg ttggcggtga ccgcaatcga
      361 agagacaaac ataccaagtg ctgccagcca gggcgtgacc aacccgaagg ccgccaacgg
      421 tgtcgtaatc aggtgaaaaa tcacggagcc gtagagattt tgcttggtga tgcgtcttgc
      481 accggcaaac aatcgatccg cttggtcttg tgtcatgtca gggtaagccg ccaaggtagc
      541 gttggtcgcg gccagcgaca ccggcgcaga catcgacaac gcacacgggc aactcataac
      601 gagtagcgaa accatgactg gcaaggcata agctggatca agcacccacc agatcatcgc
      661 gaccatgaaa gcaatcgcta gttgcacagt cacaaaccac atggccacct tgtcggcatg
      721 agccagcaaa gggctgcgca attcttcaag cgtatgaaag tgacgtgaat cgtcaactga
      781 ctgtctggct cgcaactcaa aaaagcgtgc ggtcagcaaa aacgccacaa acatggttac
      841 cgagtcgaaa tacacttcac cgtgacccac gatcgtggcg ataaagctcg gcacaaaggc
      901 ggcgatcatg ctcacggcca ccggcacatc catggtgatg tgccgctctt gccaagcttg
      961 cgccacgccg cgccacaccg gccaagctga gtaaagaatc acaggcaccg ttaacgccag
     1021 actcgcccag ttcatcaaga caatcgccca atccaggaca tcgagactgt cttggccgaa
     1081 actatcctga cgcaggtaac cgggcagcgc aaacatcatg acttgcatca tcgccagcca
     1141 tgccaatcca aggcgaacta gcgagcgacg tcttgacatc atctcgtcat cagacaaggg
     1201 gcgatttagg gcgaagattg actttggcat gggtgaaata ctagccaaga caggcattgc
     1261 cgaccttgat ttacatcaac tttgcgattc gtctggcgcg cccccaaata caaacggccg
     1321 cgattgccgc ggccgtttgc ttcacactta cctgatcttg cccgtggcaa atacgccaat
     1381 aggtcaggat ctaattggca ttaggacctt aggacattac gccttttctg cttcgaattg
     1441 cgcttcttcc gttgaaccgg tcaatgcggt ggtcgatgct tgaccgcctt cgatcgtctg
     1501 tgtcacggca tcaaagtaac cggtacccac ttcacgctgg tgcttgactg cggtgaagcc
     1561 acgatcggct gcggcgaact ctttttgttg caactcgaca aatgccgtca tgttctcacg
     1621 tgcatacttg taagccagat cgaacatgcc atagttcaaa gcatggaaac cggccagcgt
     1681 gatgaactgg aacttatagc ccatggcacc caactcacgc tggaacttgt tgatggtgtc
     1741 atcgtccagg tttttcttcc agttaaatga aggtgagcag ttgtaggcca gcagcttacc
     1801 tgggaactga cggtggattg cttcggcgaa ctggcgtgcg tagtcaaggt taggcgtggc
     1861 tgtctcacac cagatgaggt cagcatacgg tgcgtaggcc aaaccacgag agatgccttg
     1921 atcgatgcca gccttggtcc ggaaaaagcc ctccacggtg cgctcaccgg tcatgaacgg
     1981 gcgatcgttc tcatcgatgt cgctagtcac caaatcagcg gcatccgcgt cggtgcgtgc
     2041 caacaggatt gtcggtgtgc ccatgacgtc agcggccaga cgggcagcgg ttagtttgct
     2101 gacggcctcg cgggtcggaa cgagcacctt gccacccatg tgaccacact tcttgaccga
     2161 ggccagttga tcttcaaagt gcacaccgct ggcaccggcc tcgatcatgg acttcattaa
     2221 ctcgaatgcg ttcaacacac caccgaaacc ggcctcggca tcggcaatga tcggtgccag
     2281 aaagtcgatg taaccttcct cacctgggtt cttaccttcc atccactgga tctggtcgct
     2341 gcgctgcaac gcgttattaa tgcgacgcac caccatgggc actgaattcg caggatagag
     2401 cgactgatcg gggtacatct caccggccaa gttggcgtcg ccggcgactt gccaacccga
     2461 gaggtaaatg gcgcgcaagc cagccttgat ctgctgcatg gcctggttgc cggtcaaagc
     2521 gccaagcgtg ttgataaacg gttcgttatt caacaacttc caaagctttt ctgatccctg
     2581 gcgcgccaag gtgtgctcga ccatcgttga gccgcgcagg cggaccacat cttcggcgct
     2641 atagtcgcgc ttgatgccct gccagcgggg gttttctgcc cagtcttttt gtaggtcgcg
     2701 gatagatgat tcacgtgtgc tcatttccaa tctcctgagt aagtcaataa aaaataaaaa
     2761 aacagcaatt caaatgcgtt gagcttggaa taagtctacc gaggttgtgc gtcgcgagaa
     2821 gctcttatgt cttatagaag acaatatttt ttatttatta aaaacaatag gttaagattt
     2881 ttatttcatg ataagaaatg atttttccgg taatgaaatg ttcatatgtg gcagcgcatc
     2941 atgatatttc acaatccgga atctagattt cacaaaacga aatttcgccg tcttacaatc
     3001 cacctatgaa ctcatcgact cacaccacac cccaaactac atcactgcca acacacgatg
     3061 ctgcgctgcc gctaggcaag gaaagcacct acccgcagcg gtatgagccg gcattgctct
     3121 atccgatcgc acgtgccctt ggtcgccaag ccattggctt aacagatcag gctttgccct
     3181 ttatcggctg ggatttgtgg cgtggctatg agttgtcttg gctcaacgcc aagggattgc
     3241 cgcgcaccgc acttctaaaa gtctgggtac ccgcgacgag cggacatatt attgaatcga
     3301 agtcatttaa gctctacctc aacagcctga atcatgaccg gattgagaat gttgaacaac
     3361 tgacctcgag gcttgaggac gacctcagcc aagctgcagg gtgcactgtc aaagtccagg
     3421 tgctgctgcc ggatgacttc acacaagagc ccatcgatga gccaggcgat gctgaacact
     3481 gcttggatga tcaggatatc gacattaccg actaccaacc caatgctcag ttgctcagat
     3541 tggctcagac aacggggtcg gttggtacat cggtgcacga gcgggtgttt tctaggttgc
     3601 tgaaatccaa ctgcccagtg accggacaac cggactgggg cagcattcac attgagtacc
     3661 ggggacagcc gattgaccac gcagctctgt tgcgctacat cgtctcattc agacaacatc
     3721 aggggtttca tgagcagtgc gtcgaacaaa tgttttgtga catcatgcgc cactgccaac
     3781 cagaggcctt ggcca
//
LOCUS       DATBNL010000580         2239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_76707, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000580 DATBNL010000000
VERSION     DATBNL010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76707"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..1724
                     /locus_tag="VIC30_10035"
     CDS             15..1724
                     /locus_tag="VIC30_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEY7804755.1"
                     /translation="MDTSLLAPDAVSNTDDPVAQPTPIPFDLETITITRREHVALKTD
                     AAHYKRMHGDATKRIERLRACHHKDIICWKDKCQALQAQLQEAQSQLRGLRQQTFGKR
                     DERAGSLKPRHQGLPPECLTKTKRPRGQQRGWQGHGRTRVTDLPVREEVLAVDPCTCP
                     QCGLGFVEMAGTQDTEVLEVEVKAYRRQIRRHRLRAVCQCRVLPGIVTAPAPAQLIPS
                     GKLGISLFVQALLSKYRHGVPTHRLLQQWRDIGLPVASGTLTGNLQQLLPLFAPLTRA
                     GLEHLRASNAWHADETRWEVFDPEREKLGTRQYLWVFRCAEVTHFEIDPSRSASVPAA
                     VLEGVCSGVLSVDRYAAYNKYARQTPGIQLAYCWAHQRRDFLSAASQVPSLWPWALQW
                     IERIGQLYALHAKRRLMASQSDDAAFGVIDQLLRQQIEGIHGQCQAELQQEDLHDKAH
                     AALRSMIRHWSGLVTFLDHPKIDLDNNQAERELRPAVVGRKSYYGSGSLTSAELAATM
                     MSLFATLDTWRINPRRWLNEYLQACAVAGGQPPDDCSNFIPWQMAEARLATLREGYQP
                     RAS"
     gene            1724..>2239
                     /locus_tag="VIC30_10040"
     CDS             1724..>2239
                     /locus_tag="VIC30_10040"
                     /inference="COORDINATES: protein motif:HMM:NF025596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Druantia anti-phage system protein DruA"
                     /protein_id="HEY7804756.1"
                     /translation="MKTYGGYSASVLVDTLTRLMGEHPGIKRSPLSRLVCESLGWRGV
                     DGRLSEMTCRVMMLRLQRDGLITLPPSQIPNPRRRASYEPTPLTDPQPEIVRPVHELP
                     PLRVEIIQGQGPASKLFNEYIARYHYLGYTPLSGHQMRYQVYAGDTLVALLAFGASAW
                     KLADRERIIGWS"
BASE COUNT          489 a          615 c          652 g          483 t
ORIGIN      
        1 ctatctttgc aggcatggac accagcctgc tcgctcctga tgctgtttct aacaccgatg
       61 acccggtggc gcagccgaca ccgataccct ttgaccttga gaccatcacc atcacgcgtc
      121 gtgagcacgt ggctctcaag acggacgcgg cgcactacaa gcgtatgcat ggcgatgcga
      181 ccaagcggat agaacgcttg cgtgcatgtc atcacaagga catcatttgc tggaaagaca
      241 agtgccaagc cctacaagcc caactccaag aagcgcagtc acagttgcgg ggcttacggc
      301 aacagacctt tggcaagcga gatgagcgag ccggctctct gaaaccacgt catcaaggtt
      361 tgccacctga atgcttgacc aagactaagc ggccccgtgg acagcaaagg ggctggcagg
      421 gacatggacg cacccgagtg accgatttac cggtccgtga ggaagtgctg gctgttgatc
      481 catgcacttg tccccaatgc ggcttggggt ttgtcgagat ggcaggcaca caggataccg
      541 aggtattgga ggttgaggtc aaggcttatc gtcgtcagat tcgacgccat cggttacgtg
      601 cggtttgtca gtgccgtgtc ttgcctggga tcgtgacggc accggcgccg gcgcaattga
      661 tcccttctgg caagctcggt atctccttgt ttgttcaagc actgctgtcg aagtaccgac
      721 atggcgtacc cacccaccgg ttgctgcagc agtggcgtga cattggattg cctgttgcct
      781 caggcacgct gacgggtaat ttgcaacagt tgttgccact gttcgcacca ttgacacggg
      841 ctggtctcga acatctgcgt gcctcgaatg cctggcatgc cgatgaaacc cggtgggagg
      901 tatttgatcc tgagcgtgag aaattgggga cgcgccaata cctctgggtg ttccggtgcg
      961 cagaggtgac ccactttgag atcgatccat cgcgctcggc ttcagtaccc gccgcagtgc
     1021 tcgagggggt gtgctctggt gtgctctcag tggaccgata tgcagcctac aacaaatatg
     1081 ctcgccaaac gccaggcatt cagttggctt actgttgggc acaccagcgg cgtgactttc
     1141 tgtctgcggc cagtcaggtt ccgtctctgt ggccatgggc acttcaatgg attgagcgga
     1201 ttgggcagct ctatgccttg catgccaagc ggcgactgat ggcatcgcag tctgatgacg
     1261 ctgcctttgg tgtgatcgat cagttgctgc gccagcaaat tgagggtatc catgggcaat
     1321 gccaggcgga attgcagcaa gaggacttgc acgacaaggc acacgcagcc ttgcgaagca
     1381 tgattcggca ttggtcaggt ttagtgacat ttctggatca tcccaagatt gatcttgaca
     1441 ataatcaggc agaaagggaa ctgcgtcccg cggtggtggg acgcaagagt tactacggct
     1501 caggtagcct aaccagtgcg gaattggccg ctaccatgat gagcttgttt gcaacacttg
     1561 atacctggcg cattaacccc aggcggtggt tgaacgagta cctgcaagcc tgtgccgtcg
     1621 ctgggggcca accgccagat gactgtagta acttcatccc ttggcagatg gctgaagcca
     1681 gacttgctac attacgggaa ggctatcaac ccagagcaag ttaatgaaga cctacggcgg
     1741 ctactcagcc agcgtgctgg tagacacact gacccgatta atgggtgaac accctggcat
     1801 taagcgctcg ccgctgtcac gccttgtatg cgagtcactc ggttggcgcg gtgtcgatgg
     1861 acggttaagc gagatgacct gtcgggtgat gatgctcaga ctgcaaagag acgggctcat
     1921 cacgctgccg ccatcacaga taccgaatcc cagacgccgg gcaagctatg agcccacacc
     1981 gctaaccgac ccccagcccg agatcgtcag accggttcat gaattgccgc cattacgtgt
     2041 cgagatcatt caaggccaag gaccggcaag caagctgttc aatgagtaca tcgcacgcta
     2101 tcactatctg ggctacacgc cactgtcagg ccaccagatg cgataccagg tttacgccgg
     2161 cgacaccttg gtggcattgc tagcatttgg ggctagtgct tggaagcttg ctgaccggga
     2221 acgcatcatt ggctggagt
//
LOCUS       DATBNL010000581         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96612, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000581 DATBNL010000000
VERSION     DATBNL010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96612"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1007..1360
                     /locus_tag="VIC30_10045"
                     /pseudo
     CDS             1007..1360
                     /locus_tag="VIC30_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010089410.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            1360..1647
                     /locus_tag="VIC30_10050"
     CDS             1360..1647
                     /locus_tag="VIC30_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018444077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7804757.1"
                     /translation="MAKKNIGSSFDDFLLEESMLEEATAVAIIRVIAWQIAQEMKAQS
                     LTKTQLASKMHTSRAALNRLLDEEDTSLTLTTLASAAAALGKTIKLELQAV"
BASE COUNT          550 a          496 c          554 g          434 t
ORIGIN      
        1 aataaccaat agtgggacta tcaccggtgg cgctgctgca atcttcaaca cagcgaagcc
       61 ccccaactac agaggttcga ttaagtcact aaccaacaat ggagcattaa acggaggcac
      121 cgctggttcg atcgataatg atgggacaat cacgacactc acgaatgaag tcgacggcac
      181 aataaatggt gttgtcgaca ataagaacgg tggggtaatt ggaaacttca ctaacgaagg
      241 aaccctaaat ggtgctgagt tcgatgagtt tggcctgacc gcgatcttta acaccggcag
      301 aattgacgaa ctgacaaacg aaaccactgg aaagatcgac ggcaaaatct acttcaggcc
      361 atctctcgat tcaatacggc tgttcaccaa caaaggtgag atcacgggtg tcctgctggt
      421 tgatggtgtt ggatctcagc catctctgtt gaaccagtca gatgcgtcga ttcggactga
      481 taccgtaaac gtcagcgtta ttgaggtgac caatgctgct aacactttgg ttagtaatgc
      541 gggtgtgatt gcttctaggc tcgtagatac gcacccgtat gcaacagggt cttatggcgt
      601 gacccttgcc ggtggtagcg atacgctgaa caaccgagtt ggaggcatca tcggtggcga
      661 cactgctggc gtacaagtcg gcaatgcagg tggggatggg tcccaagcta gcatcaccaa
      721 ttcgggcacg attgagggaa catcctacgg ggtgctcgtg cgttctggca gtcgtgttaa
      781 cgagtttacg aataatgcag atgcagtcat cagcggcggc aacattgcca tctttaacat
      841 gggcacgatt accaccttga ccaacaaagt tggcgcggaa attaaagacg ctgtcattgc
      901 aggtgatgtg gtgacgttta ccaatgaggg tctgatcgat ggggcggttg agctgggtac
      961 tgccgatctt gatatcgccg gggatagtgg gcgcatcacc ggcgccgtga caggaacggg
     1021 cactgtcaat gtcaacggca gcttcacgac agatgccggt tctgaaccgg tcaaggaatg
     1081 gctgaagagt ttgccagcca tcgaacgcaa agtcattggc gaagacatca agacagttca
     1141 gttgggttgg ccgctaggca tgcctatggt gcgtaacctc ggtgacagca tctgagaagt
     1201 ccgcatcaaa ctcgagaacc ggattgcgcg cgtgttgttt gcactggatc aatccaccat
     1261 ggtgttgctt cacggcttta tcaagaagca acaggctacg cccaagccag acctggattt
     1321 ggccaaggac cgcctgaaac aactgaaacg gagatcatga tggcaaagaa gaatatcggc
     1381 agcagctttg atgacttcct actggaagaa tcaatgctgg aagaagcaac ggcagtcgca
     1441 atcatacgtg tcattgcctg gcaaattgct caagaaatga aagcccagtc attgactaaa
     1501 acacaactgg cgtcaaagat gcacaccagt cgtgctgcac tcaatcgtct gttggacgaa
     1561 gaagacacga gtctgacgtt aaccacgcta gccagcgcag cggcggcact gggcaaaacg
     1621 attaagctgg aattgcaagc cgtctgatat ttttgagggt tagcgtgtga gcctatggaa
     1681 ttgcaggcac acacgcgtag aacactgggc gtattcactg gcaacgctga cacgatatcc
     1741 gagatacctt tctctgtatg agcaagagtg acggcaaacg tagcaatcca agatggcgac
     1801 gcacggactt tgaggactgg gtcacggccc acctcgcaca acgtcgaacc tgtgccggcc
     1861 gagcctgtca gcagacctat atgtgacgca cctgtagcgg caaaatcagc atccggtcaa
     1921 aaaagcgacg caagattgcc ttgcccagct tttccagata acacctgttg cgccctgctg
     1981 acaccgaagt gaaattttgc gtggggaacg aaaaattttc cccaaactcg cgca
//
LOCUS       DATBNL010000582         1722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96625, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000582 DATBNL010000000
VERSION     DATBNL010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96625"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VIC30_10055"
     CDS             <1..186
                     /locus_tag="VIC30_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804758.1"
                     /translation="ETLPTRGERILLVFMAILFFAAIMGTTRLGVERVRDYALRLQAK
                     RKTQSLPSDTTASENQA"
     gene            338..709
                     /locus_tag="VIC30_10060"
     CDS             338..709
                     /locus_tag="VIC30_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804759.1"
                     /translation="MKSQQLFLMTVMIPILATALAACTTNVSRGEVTSYFNDKGQLEI
                     LSSSYREDWALQLAVNRGNATCQKSGKTFAVINRQSRYQGVNQEMKAALNVANNLTHG
                     KVPYARSTSRDWQVTVIGQCK"
     gene            complement(798..>1722)
                     /locus_tag="VIC30_10065"
     CDS             complement(798..>1722)
                     /locus_tag="VIC30_10065"
                     /inference="COORDINATES: protein motif:HMM:NF021010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HEY7804760.1"
                     /translation="SDVHLPLERTASGWRLVTDGVVDDDETGYYEDKMAVAWADKPQL
                     ATAFTHHGKDLVAGPHRPVTRGLHYTTDGSLIDLWHWKSVRTGWQLPGRLDDNHFGEP
                     IESLFTGHRYTGGYQKDWGGSGYRLNVCLRDDPDCQAVLARVAKYDEYWPVPGSARQR
                     LQQCLDNPAQCEDRLIPILLPKDISAVEPETGVRMGSGAGALTPATGQIWSKTAEQQV
                     PVGTRVPGVVIDGRLGQGRADVRAAGHWQDGQWTLEIQRALDTFDDKDITLAPGTGDK
                     YLWVAPFDSSQTRHSHHIRPVRVRVEPSQNP"
BASE COUNT          408 a          536 c          410 g          368 t
ORIGIN      
        1 gagacgctac ccacccgcgg agaacgcatc ctactggtct tcatggcgat ccttttcttt
       61 gcagcgatca tgggaacgac ccgattagga gtcgagcgtg ttcgagatta tgcactcaga
      121 cttcaagcaa aacgaaagac ccagtcatta ccgagcgata ccactgcctc agaaaaccaa
      181 gcctgagccc ccacagtccg tcttcactca ccttcactca ccttcactca gatcagtcca
      241 ccatagccac catcattgac ttgcaatgaa ttcacgcgcc tcggaaacag acatttgtta
      301 tcttatggct gtctatcatt tttcatgaga accaatcgtg aaatcacagc aattgttctt
      361 aatgactgtc atgatcccca tccttgccac cgcactggct gcctgcacca ccaatgtcag
      421 ccgcggcgaa gtcacctcct atttcaacga caaagggcaa ctcgaaatcc tgagctcctc
      481 ctatcgtgaa gactgggcgc tgcaattggc tgtaaaccga ggcaatgcca cctgccaaaa
      541 atccggcaag acctttgccg tgattaaccg acagtctagg tatcagggag tgaaccagga
      601 aatgaaagcc gcactgaacg tggccaacaa tctcacgcac ggcaaagtcc cttacgcgcg
      661 atccacttcg agagactggc aagtcactgt gattgggcag tgcaagtagt caactccaaa
      721 agcgtattca gttcgtcgtc tcgagttagg tagcggtcgc ataggttttc ctcaaaggat
      781 cgcctaaagg atttccctta aggattctgg ctaggctcaa cccgcacccg caccggtcga
      841 atgtgatgag aatgccgggt ttgtgaactg tcaaacggtg ccacccacaa atacttgtca
      901 cccgtgccgg gcgctagtgt gatgtctttg tcatcaaacg tatcaagtgc gcgctggatt
      961 tctagcgtcc attgcccgtc ttgccagtgt ccagcagcac gcacatcggc gcgaccttga
     1021 cctagacgac catcaatcac gacgcctggc acacgcgtgc ccacgggcac ctgctgctcg
     1081 gccgtcttgc tccagatctg accggtcgct ggcgtcaacg ccccggcacc cgagcccatg
     1141 cgaacgccag tctctggttc aacggctgag atgtctttgg gcaacagaat cggaatcaag
     1201 cgatcctcac attgggctgg gttatccaga cactgctgca gccgctggcg tgccgagcct
     1261 ggtacgggcc aatattcatc gtacttcgcc accctagcca acaccgcctg acagtcaggg
     1321 tcatcgcgca aacacacatt gagtcggtag ccactaccac cccaatcctt ctgatagcca
     1381 ccagtgtagc ggtgacccgt aaataacgat tcgatcggtt ccccaaaatg attgtcatcc
     1441 agtcgtccgg gcaactgcca accggttcgc actgacttcc agtgccagag atcaatgagc
     1501 gagccatcgg tggtgtagtg caaaccacgg gtgaccgggc gatgcggccc cgccaccagg
     1561 tctttaccgt ggtgtgtaaa cgcggtggcc aactgtggct tgtccgccca agccaccgcc
     1621 atcttgtctt cgtagtaccc ggtctcatca tcatcaacga caccgtcggt caccaaccgc
     1681 cagccagacg ccgttcgttc aagcggcaaa tgcacatcgc ta
//
LOCUS       DATBNL010000583         3568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_46846, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000583 DATBNL010000000
VERSION     DATBNL010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46846"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..881)
                     /locus_tag="VIC30_10070"
     CDS             complement(<1..881)
                     /locus_tag="VIC30_10070"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY7804761.1"
                     /translation="MIKPDQPFDIEDSVGAWVEHGKFVVPGARGGSLAGLRFAVKDIY
                     DVAGHKTGFGNPVWLASHQPATLTAPIVQALLDAGATLMGKVITDELTYSLHGDNAHD
                     GTPLNIKAPGCVPGGSSSGSAAAVAAKLVDFALGSDTGGSTRVPASYCGLWGLRTTHG
                     SLPTAGVLPLQPSFDTLTWFADDAAVFEQVGEVLLPATQHVFKRLLHWPEMWLAADDE
                     MQAALIWVQDRVQAHLAIANEPTPLVPAGQTLEDWRRAYHVASAKQAWEQHGQWIQSH
                     QPNLGPAIAARFQFASTV"
     gene            complement(878..1783)
                     /locus_tag="VIC30_10075"
     CDS             complement(878..1783)
                     /locus_tag="VIC30_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013900223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY7804762.1"
                     /translation="MKLVSYGKAGAERPGILDREGVIRDLSHVVPDIGTAQLGADVLA
                     QLAQLDVESLQPLSGSPRLGCPIAHVGKCIGIGMNYTDHAEETGSPIPTEPIIFTKAV
                     SSIQGPDDDIMLPKDSVKTDWEVELGIVIGTRASYVSQDKALDHVAGYVLANDVSERE
                     YQMERGGTWDKGKGCDTFGPMGPWLVTRDEIADPNNLDLWLDVNGQRMQTGNTSKMIF
                     NVKEIISYVSRFLTLRPGDVIITGTPPGVGLGQKPQRFLKAGDEVTLGGEHLGTQTQR
                     VVAWHDGYDGNDGNDGNDGRGVDAA"
     gene            complement(1795..3390)
                     /locus_tag="VIC30_10080"
     CDS             complement(1795..3390)
                     /locus_tag="VIC30_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011903004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HEY7804763.1"
                     /translation="MKLDSFDSIHRKPVLGRNLIATSQPLASQAGAIAFAKGGNAVDA
                     VLAAAITLTVVEPVMNGLGGDAFALYWDGNHLHGLNGCGRAPSGWSLDRFKDMTVMPK
                     QGWETVTVPGQVAAWADLSDRFGDLPFETLFDDAIRHAMDGFPVSPVIASQWHQATLD
                     LAAEPGFEAFMPGGRAPKAGEIWRFADQAVTLKEIARTHGRSFYEGRLAQCITDFAAQ
                     CGAALSADDLRAHESAWVEPIGQAFEDVTVHEIPPNGQGIAALIALGIMKHLPYAQTK
                     PGSAQRAHLEIEAMRLAFADLYAHIGDPDAMQTSAEALLDDAYLKQRAALVDVAKAGT
                     YPSGQPGSGGTVYLCAADAQGRMISYIQSNFKGFGSGVVVPGTGISLHNRGMAFSLQP
                     GHPNVVAPAKRPLHSIIPAFMMRDGEPLMAFGVMGGNMQAQGHLQMTMRCATEGLNPQ
                     AASDAPRWRINDAGDLIMEAEWPAEVIEQLRQMGHDPKVQPTGSLDFGSAQLIARLPA
                     TNGETAAYVGGSDTRRDGQVIGY"
     gene            complement(3484..3567)
                     /locus_tag="VIC30_10085"
     CDS             complement(3484..3567)
                     /locus_tag="VIC30_10085"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804764.1"
                     /translation="MGFLCSDAASFVTGEVIHINGGLHMGG"
BASE COUNT          811 a         1067 c          937 g          753 t
ORIGIN      
        1 accgtcgagg caaactgaaa ccgtgcggca atagcaggcc ccagattggg ttggtggctt
       61 tgtatccatt gaccatgttg ttcccaggct tgcttggcgc tagccacatg gtaggcacgt
      121 cgccaatctt cgagggtttg acccgcgggc acaagcggcg ttggttcgtt cgcgatggct
      181 aggtgcgctt gcaccctatc ttgaacccat atcaacgcgg cttgcatttc atcatcagca
      241 gccaaccaca tttcaggcca atgcaacaga cgtttaaaga cgtgttgcgt ggctggcaac
      301 aacacttcac cgacttgttc aaacaccgcc gcatcatcgg caaaccatgt cagcgtatca
      361 aacgacggtt gcaggggcag cacaccagcg gtgggtaagc tgccatgtgt cgtgcgtaag
      421 ccccataggc cacagtaact tgcaggtacc cgggttgagc cgccagtgtc actgccaagt
      481 gcaaagtcaa caagcttggc tgccaccgcg gcagcggagc cgcttgaaga cccgccaggc
      541 acgcagcctg gggctttgat attgaggggc gtgccgtcat gcgcgttgtc gccatgaaga
      601 ctgtatgtca gctcatcggt aatgacctta cccatgagcg tggcgccggc atcaagcaac
      661 gcctgcacga tcggtgcagt cagtgttgca ggttggtgtg aagccaacca aacaggattg
      721 ccgaaaccag ttttatggcc cgcgacgtca tagatatctt tcacagcaaa ccgcaagccg
      781 gccagactgc caccgcgtgc gcccggcacc acaaacttac cgtgctcaac ccaagcgcca
      841 acgctgtcct caatatcaaa cggctggtca ggtttaatca tgccgcatca accccgcggc
      901 cgtcattgcc gtcattgccg tcattgccgt catagccgtc atgccaggca accactcgtt
      961 gcgtctgtgt gccgaggtgt tcgccaccaa gggtgacctc atcacctgcc tttaaaaacc
     1021 gctgaggctt ttgtccaaga cccacacccg gcggtgtgcc tgtgatgatc acatcacctg
     1081 gccttaaggt gaggaaccga ctgacatagc tgatgatctc tttcacgtta aagatcatct
     1141 tgctggtatt acccgtttgc atgcgctggc cgttgacatc tagccagaga tccagattat
     1201 tcggatcagc gatctcatcg cgcgtcacaa gccaaggccc catggggcca aacgtgtcac
     1261 agcctttgcc tttgtcccaa gtaccgccgc gttccatttg atattcgcgt tcgctgacat
     1321 cattggccag cacataaccg gccacgtgat ccaaggcttt gtcttgcgac acatacgatg
     1381 cacgcgtacc aatgacaatc ccaagttcaa cttcccagtc ggtcttcacc gagtccttgg
     1441 gcagcatgat gtcatcatcg gggccttgaa tcgacgacac ggctttggtg aagataattg
     1501 gttcagtggg aatcggtgaa cccgtttctt cagcatgatc ggtgtaattc ataccaatgc
     1561 caatacactt acccacatgt gcaatcgggc agccgagccg ggggctacca gacaagggct
     1621 gcaaagactc gacatcaagc tgtgccagct gcgccagcac atcggcaccg agctgcgctg
     1681 tgccgatatc gggcaccacg tgcgacaaat ccctgattac tccctctcta tctagaatac
     1741 cggggcgctc ggcgcccgcc tttccgtagc tcaccagttt catgtcttga atccttaata
     1801 accaatgacc tgtccatcgc gtcgggtgtc tgagccaccc acgtaagccg ccgtttcacc
     1861 gttggtagcc ggcaagcgag caatcagctg cgcactccca aaatccaggc taccggtggg
     1921 ttgcacctta ggatcatggc ccatttggcg caattgttca atcacctcag caggccactc
     1981 ggcttccatg atgagatcgc ccgcatcatt aattcgccaa cgtggtgcat ctgatgccgc
     2041 ttgcgggttt agaccctctg tcgcgcagcg catggtcatt tgcagatgac cttgcgcctg
     2101 catattgccg cccatgacgc caaaggccat caatggctcg ccatcacgca tcatgaaagc
     2161 cggaatgatc gagtgcaatg gtcgtttggc cggtgccacc acattggggt ggccaggctg
     2221 caaactaaat gccatgccac ggttgtgtaa ggagatgcct gtacctggca caaccacccc
     2281 ggaaccaaac cccttgaagt tagactggat gtaagaaatc atccgaccct gagcgtctgc
     2341 agcgcacagg tagacggtgc cgcctgaccc aggctggcct gatggataag tcccggcttt
     2401 agcaacatcg accaacgcgg cacgttgctt cagataggcg tcatcaagca aggcttcagc
     2461 cgaggtctgc atggcatcgg ggtcgccaat gtgggcatac agatcggcaa acgccagacg
     2521 catcgcttca atctcgaggt gggcgcgttg cgctgaacct ggcttggttt gtgcataggg
     2581 caagtgcttc atgatgccaa gagcaattaa cgcggcgatg ccttgaccgt tgggcgggat
     2641 ttcatggacg gtgacgtcct caaatgcctg gccaatgggc tcaacccagg cactttcatg
     2701 cgcgcgtaaa tcgtcggccg acagtgctgc accacattga gcagcaaagt cggtgatgca
     2761 ctgagccaga cgaccttcgt aaaaggatcg tccatgggtg cgggcaattt cctttaacgt
     2821 gaccgcctga tcggcaaagc gccagatctc accggccttg ggtgccctgc caccgggcat
     2881 gaacgcttca aacccaggtt cagcagcaag atccagtgtc gcttggtgcc actgactggc
     2941 aatcacgggc gagacgggaa acccgtccat cgcatggcga atagcatcgt caaacagcgt
     3001 ttcaaacggt aagtcaccga atcggtctga cagatcagcc caggcagcca cctgccccgg
     3061 caccgtcact gtctcccagc cctgcttagg catgacagtc atgtctttaa agcgatctaa
     3121 actccagcca ctaggcgcac ggccgcagcc attgaggcca tgcaggtgat tgccatccca
     3181 gtaaagtgcg aaggcgtcgc cccccagacc attcattacg ggttcgacca cagtcaaggt
     3241 gatcgccgca gccagcaccg cgtcgaccgc attaccgcct ttggcaaagg caatcgctcc
     3301 ggcctgtgat gccagcggct gtgaggttgc gatcaggttg cgacctagca ctggcttgcg
     3361 gtgaatggag tcaaacgaat cgagcttcat gaaagaccta tcccgtggtt atgcgaaacc
     3421 ataaggatag gtgaaagtac gactgtttgc ttaggcctca ctgccccgtg agcaaaaagg
     3481 aactcaacct cccatgtgta acccaccgtt gatgtggatc acctcacccg ttacaaaact
     3541 cgcggcatca ctacaaagaa atcctata
//
LOCUS       DATBNL010000584         2808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_126597, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000584 DATBNL010000000
VERSION     DATBNL010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126597"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VIC30_10090"
     CDS             complement(<1..295)
                     /locus_tag="VIC30_10090"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018424259.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEY7804765.1"
                     /translation="MMQTAQANDPVVIVSAMRTPLGSYLGCFKTVPAVRLGAHAVKAA
                     VAQSGVNATDVDELLMGCVLPAGLGQAPARQVAMGAELPEHVAASTINKVCGSG"
     gene            complement(292..1464)
                     /locus_tag="VIC30_10095"
     CDS             complement(292..1464)
                     /locus_tag="VIC30_10095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013690311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HEY7804766.1"
                     /translation="MNGLNFDLGDDLNALREAVRDFAVKEIAPRAAEIDRTDAFPMDL
                     WRKFGELGLLGMTVSEANGGVGMGYLAHMVVLEEISRASASVGLSYSAHSNLCVNQIE
                     RNGNAEQKARYLPSLISGEHIGALAMSEPNAGSDVVSMKLRAVACDDGYVLNGSKMWI
                     TNGPDCDVLIVYAKTDPDAGARGITAFLVDKGMPGFSVAQKLDKLGMRGSHTGELVFQ
                     DVMVPRQNMLGELGEGVKVLMSGLDYERAVLAAGPVGIMQACMDAVTPYIHDRVQFGQ
                     SIGEFQLIQAKVADMYTTLQACRAYLYAVGRQLDALGATHARHVRKDAAGVILYTAER
                     ATAMAGDAIQIFGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGREYFEETR"
     gene            complement(1514..2590)
                     /locus_tag="VIC30_10100"
     CDS             complement(1514..2590)
                     /locus_tag="VIC30_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011515122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7804767.1"
                     /translation="MLYRECGQFKVSYRADGQVFPIAQDRIGVGLLVIFAAIFVPMLA
                     SEYLLNAILVPFLIFSLAALGLNFLTGYAGQLSLGSAAFMAVGAYAAYNFQVRIESMP
                     FLLAFVLGGGVAALVGIAFGLPSLRIKGFYLAVATLAAQFFVLWCLTKFSWFSNDSPS
                     GVISAPPLEMFGFAFNTPASKYLLVLGIVVVMFVLGKNLVRSSTGRAWMAVRDMDVAA
                     EVIGIPLIKTKLIAFAISSFYCGMAGALYAFCYLGTVEPDGFSLELSFRILFMVIIGG
                     VGSILGNFFGAAFILLLPIALDLMLPFISGLLNLPIAGSTVSHIQLMVFGALIIFFLV
                     VEPHGLARLWQIGKEKLRLWPFPH"
     gene            complement(2602..>2808)
                     /locus_tag="VIC30_10105"
     CDS             complement(2602..>2808)
                     /locus_tag="VIC30_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010814876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7804768.1"
                     /translation="TSVPGAIVGGIIIGVAEKLAEIYIPPVLQDSFGGNFGGIESWFS
                     YIFALIFLLIRPEGLFGEKHIDRV"
BASE COUNT          779 a          850 c          648 g          531 t
ORIGIN      
        1 tgccagagcc acagacttta ttgatggttg aggcggccac atgctcaggc aattcagcgc
       61 ccattgccac ttggcgcgca ggtgcctgac cgagaccggc aggcagcacg catcccatca
      121 acaactcgtc cacgtctgtc gcattgacac cgctttgggc gacggcggct ttgacggcat
      181 gggcgccaag cctgaccgcc ggcacggttt taaaacaacc cagataagac cctagtggcg
      241 tgcgcatggc tgagacgata acaaccggat cgtttgcttg agctgtttgc atcatcgagt
      301 ctcctcgaaa tactcacgtc caatcagcat gcgtcggatt tcagaagtcc ccgcaccaat
      361 ttcatacaac ttggcatcgc gccacaaacg cccaacggga tactcgttga tatagccatt
      421 gccaccaaaa atctgaatgg cgtcaccggc catggctgtt gcgcgttcgg ccgtatacag
      481 gatcacaccg gcagcatcct ttctaacgtg ccgcgcatgc gtcgccccaa gcgcatcgag
      541 ttgccggcca acggcataga gataagcccg gcaggcctgc aaggtggtat acatatctgc
      601 cactttggcc tgaatgagct ggaactcacc aatcgattga ccaaattgca cacggtcatg
      661 gatatacggc gtaaccgcgt ccatgcaggc ctgcataatg ccaacgggtc cagcggccag
      721 cacagcccgc tcgtaatcca gaccactcat cagcaccttc acgccctcgc ctaactcgcc
      781 gagcatgttc tggcgcggca ccatcacatc ctgaaaaacc agttcaccgg tgtgcgagcc
      841 acgcatacct agtttgtcga gtttttgtgc tacggagaac cctggcatgc ctttgtcgac
      901 caaaaaagcg gtgataccac gcgcaccagc atccggatcg gtcttggcat aaacaatcag
      961 cacgtcacaa tcaggcccgt tggtgatcca catcttgctg ccattcaaaa cgtaaccgtc
     1021 gtcacaggcg accgcccgca atttcatgct cacaacatca gacccagcat tgggctcact
     1081 catggccaat gccccaatgt gttcaccgga aataagcgac ggcagataac gcgctttctg
     1141 ctcagcattg ccgttgcgct cgatctggtt gacacagagg tttgagtgag ctgagtagga
     1201 caggcctacc gaggcgctgg cccgtgaaat ttcctcaagc accaccatgt gcgccaaata
     1261 acccatgcca accccgccgt tggcctcact aactgtcatg ccgagcaagc caagctcacc
     1321 gaacttgcgc cacaagtcca tggggaaagc atctgttcga tcaatctcag ccgcgcgagg
     1381 cgctatctcc ttaacagcaa aatcgcggac cgcttctctt agcgcattga ggtcatcacc
     1441 caaatcaaag ttcaaaccgt tcatgcatca aactccttgc caaattagtg tcttgtccct
     1501 tgatgtcagc acactagtgg gggaacggcc acaagcgcag tttttccttt ccgatttgcc
     1561 acagcctagc caagccatgc ggctcgacca ccaaaaagaa aataatcagt gccccaaaca
     1621 ccatcaactg gatatgagag actgtggagc cagcgatggg cagattcagt agtccggaga
     1681 taaacggcaa catcaggtcc agtgcgatgg gcaaaagcaa tataaaagct gcaccaaaga
     1741 aattccctag aatactgcca acaccaccga tgattaccat aaacagaatt cgaaacgaaa
     1801 gttctagcga gaagccgtcc ggctcgacgg tgcccagata acaaaatgca tacagggcgc
     1861 ctgccatccc acaataaaaa gaactgatgg caaaagcaat gagtttggtc ttaatgagtg
     1921 ggatgccaat cacctcggct gccacgtcca tgtcacgcac cgccatccag gcgcgaccgg
     1981 ttgacgatcg caccaagttc tttccgagca cgaacatcac cacgacaata cctaacacca
     2041 gcaaatactt cgaggccggt gtgttaaagg caaaaccaaa catctccaag ggcggtgcgc
     2101 taatcacgcc cgatgggctg tcattagaga accatgagaa ttttgtcaga caccaaagaa
     2161 caaagaattg cgctgccagc gttgcaaccg ccagatagaa ccccttaatc cgcagcgagg
     2221 gcaagccaaa ggcaataccc actagcgcgg caacgccacc tccgagcaca aaagccagca
     2281 aaaagggcat cgactcgatg cgcacttgaa agttatacgc agcataggca ccgaccgcca
     2341 taaaggccgc tgacccgagc gacaattgac ctgcgtagcc ggtcaaaaaa ttcagcccca
     2401 gtgccgcaag ggaaaagatc agaaacggca ccaggatcgc attcagcagg tactcactgg
     2461 caagcatagg cacaaagatc gccgcaaaaa tcacgagcaa cccgaccccg atccgatcct
     2521 gcgcaattgg aaacacttgt ccgtctgcgc gatacgacac tttgaactga ccgcattcac
     2581 ggtacaacat ctgcttactc cttaaacccg gtcaatgtgt ttctcaccaa atagcccttc
     2641 aggccgaatc aacaaaaaaa tcaaggcaaa aatgtaagaa aaccaactct caataccacc
     2701 aaaatttcca ccgaatgaat cttgcagaac aggcgggatg taaatctctg ccaatttctc
     2761 agccacgccg atgatgatgc ccccgacaat cgcaccgggc actgatgt
//
LOCUS       DATBNL010000585         3831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_106799, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000585 DATBNL010000000
VERSION     DATBNL010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106799"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1260
                     /locus_tag="VIC30_10110"
     CDS             <1..1260
                     /locus_tag="VIC30_10110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804769.1"
                     /translation="GAMTHPLAKIVVPFYKTPTNVIKETLKRTPLALLSGDIRRKILA
                     GGREGDMALAQIATGSAIASTFAYMAMGLDDPDQNLIIVGNGPTNLQARQAMERQGIQ
                     PMSINIKQEDGTYKSITYSRLDPISGLLTMAADFAYYSQYEDDAAVLEQLAMALTLGI
                     SQYAMDMPFLQGVSELASALTNPDPKLRAEKAMQFFGEKATDVLLAPLPTVSTFSAGV
                     ERMVDPTMSSSMMPEGSLLGTEITELPSFMRGFFSSLQKAKGRNPFFSDTVEPKLNLW
                     GEKMEAGGGAFWEFLSPIRVQDTRFSPVDKELQQLGRAIRMNPEKIDGVLLNAKQYNR
                     WVTIQNTADLSGSTPKFPGDEGYDPSATLLPMLSNFINSEYYLSQPTKEDKLEAINTL
                     VSTYRSTAKKILRMEDSLLDAKINAVQ"
     gene            1307..2944
                     /locus_tag="VIC30_10115"
     CDS             1307..2944
                     /locus_tag="VIC30_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804770.1"
                     /translation="MADYSINAVSRKVSYTGSAGLGPYAFSFEILDDDDIAVYLNETL
                     LTKTTDYTVTINVNGTGSVTLVTGGAIAVAPTASDLVVILGARDIERTTDFVTAGDLR
                     ASALNEQLDALTIFMQQIKEEVDRSVKAPAFDPTGIDMVLPKKADRVNAFIAFDANGD
                     VSAAVPSDDVTTLAEVATDIATLADIEDGTIATDAISDTAAIASNVTTVAGIAANVTT
                     VAGNTSNINAVAADATDIGTVAANIADVSAVAAIDSQVSAVAADATDIGTVATDLAGT
                     DTIGTVATNIANVNSVATNIANVNSVAGNETNINAVVADEADIGAVAGALTNVNTVAT
                     NIDSVDAVGSDLTGLPITVDYGDLTAASNPATPSGAIGTVYSISDEINTVAGIQAETI
                     SVAGVALDVSTVAGISANVTTVAGVAANVTSVANISSDVVLVANIDSDVSAVAAIDSD
                     VTTVATNVADITNFADVYQGPKSADPTLRNDGSALQAGDLYFNTVSDEIRVYTGSAWV
                     AGITNVNNLLLASNNLSDLTDAQDARDNLGISDMGAL"
     gene            2944..>3831
                     /locus_tag="VIC30_10120"
     CDS             2944..>3831
                     /locus_tag="VIC30_10120"
                     /inference="COORDINATES: protein motif:HMM:NF037250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804771.1"
                     /translation="MSTAIQRRGGTTAQHASFTGLAREITVDTDKKTVVVHDGSTAGG
                     FPLARESSIQGLFRKADPTAVAWTKTGAGTAETQTAIYAEVNGSILTVASGTSITMPT
                     LAAGTDYAIWLETDGDLVATTNHTSPPTANARKLGGFHYAAGENATGTSGGNTTPAIN
                     EYSFWDLKFRPHCDPRGMALIADGFWADIYLTGVDHHTNGTSKYNVTIADGSSPPKVP
                     SNFGGNGSTTYGSYTWFEAMELLSSHGKRAPTQREFMALAYGTTEATSRGTDPVTTQM
                     SATDDNFTSKWGIMQSTGCL"
BASE COUNT          997 a         1000 c          994 g          840 t
ORIGIN      
        1 ggtgctatga cccatccact agcaaagatc gtcgtgccgt tttacaagac gccaacgaat
       61 gtcatcaagg aaacgctaaa gcgtacaccg cttgctttgt taagtggcga catacggcgt
      121 aagatcttgg ccggtggccg ggaaggcgat atggcattag cgcagattgc aacaggatct
      181 gctattgcat cgacctttgc gtacatggcg atgggccttg atgacccaga tcaaaacttg
      241 atcattgtgg gcaacggccc gacaaacctg caagctaggc aggcgatgga aaggcaaggc
      301 atccagccta tgtctatcaa catcaagcaa gaagacggca catacaagtc aatcacttac
      361 agccgcttag acccgatctc aggcttactg acgatggccg ctgactttgc gtactactct
      421 cagtacgaag atgacgcagc cgtacttgag cagctcgcaa tggcgctgac tcttggcatt
      481 tcccagtacg cgatggacat gcctttcttg caaggcgtgt ctgagcttgc tagtgcatta
      541 acaaacccag atccaaaact gcgcgcagaa aaagcaatgc agttctttgg cgaaaaagca
      601 actgacgttt tgcttgcgcc gcttccaacg gtatcgacat ttagcgccgg cgttgagcgt
      661 atggttgatc caaccatgtc atcctcaatg atgccagagg gatcactgct cggcacagag
      721 atcacagagc tgccatcatt tatgcgtgga ttctttagct ctttgcaaaa ggccaaagga
      781 cgcaatccat tctttagcga cacagtggag ccaaagctca acttatgggg cgaaaaaatg
      841 gaagccggag ggggtgcctt ctgggaattc ctgtctccta ttcgcgtaca agacactcgg
      901 ttttcgccgg ttgacaaaga gctgcaacag cttggccgag caattcgcat gaatcctgag
      961 aagattgatg gcgtgctgct taatgcaaag cagtacaacc gctgggtaac gatacaaaat
     1021 accgctgacc taagtggctc cacgccgaag ttccctggcg acgaagggta tgacccgtct
     1081 gcaactctgc tgccgatgct gtcgaacttt attaactcag aatactatct gtcacaacca
     1141 acaaaagaag ataagctaga agctatcaac acgttggtca gtacatacag atcaaccgcg
     1201 aaaaagatat tgcggatgga agactctctt cttgacgcaa agattaacgc ggtacaatga
     1261 tctacatatt tatggtaaaa aggcattaat ttcagaggac tagctgatgg ccgattacag
     1321 tattaacgca gtttcgcgga aagtctctta caccgggtcg gccgggctag gcccgtatgc
     1381 cttttcgttt gagatcttgg acgatgacga catcgccgta tacctcaacg agacgctcct
     1441 gaccaagacc acagactata ccgtcacaat caacgtgaat ggtacaggct ctgtcaccct
     1501 ggttactggc ggcgcaattg cggtggcacc aacagcaagt gacctggttg ttattctcgg
     1561 cgctcgcgac attgagcgca ccactgactt tgtgacggcc ggtgacctgc gtgcgtcggc
     1621 tctgaatgag cagctggatg cactgactat cttcatgcag cagatcaagg aagaggtgga
     1681 tcgctctgtt aaggcgccag cttttgaccc gacaggcatc gacatggtgt tgccgaagaa
     1741 ggcagatcgc gtcaatgcgt ttattgcgtt tgatgcgaat ggtgacgtgt cagcagccgt
     1801 tccgtcagac gacgtgacga ccttggcaga ggtggccaca gacatcgcca cactggccga
     1861 catcgaagac ggcaccatcg ccacagacgc gatctcagac actgcagcca ttgcgtcgaa
     1921 tgtcactacc gttgccggta tcgccgcaaa cgtgacgaca gttgcaggca atacctcaaa
     1981 catcaacgca gttgccgcgg atgctacaga catcggcaca gtggctgcaa acatcgccga
     2041 cgtgtcggca gttgcggcga ttgactctca ggtctcagcg gttgcagccg acgccacaga
     2101 cattggcaca gtggccacag acctcgcagg cactgacacc atcggcaccg tggcaaccaa
     2161 cattgcaaac gtaaattcag ttgcaaccaa tatcgccaat gtaaactccg ttgcaggcaa
     2221 cgagacaaat atcaatgcgg ttgtcgcaga tgaggcagac attggcgcag tagctggcgc
     2281 gctgactaat gtgaatacag ttgcaacaaa catagattca gttgacgcgg ttggctcaga
     2341 tttaaccggc ctaccaatta cagttgatta cggggatctt actgcggcca gtaatccagc
     2401 aactccttct ggtgcaattg gtacggtcta tagcatttct gacgaaatca acacagttgc
     2461 tggaattcaa gcagaaacaa tctcagttgc aggcgtcgca cttgatgtgt caacggttgc
     2521 ggggatttct gcaaacgtaa cgaccgtggc aggcgttgcg gcaaacgtca caagcgtggc
     2581 caacatttct tcagatgtag tgcttgttgc aaacattgat tcagacgtgt ctgcggtcgc
     2641 ggcgattgat tctgatgtga caaccgtagc aaccaatgtt gctgacatta caaatttcgc
     2701 ggacgtgtac caaggtccaa agtctgctga cccaacattg cgaaacgatg ggtcggcact
     2761 gcaagctggg gatttgtatt tcaataccgt gtccgatgaa atcagggtgt acacaggttc
     2821 ggcttgggtt gccgggatca caaacgtgaa caaccttcta ttggctagca ataacctttc
     2881 cgacctaacc gacgcccaag acgcaagaga caacttgggt atttcagata tgggagcttt
     2941 ataatgagta cagcaattca gcgtcgcggc gggactacgg cgcaacacgc atcattcact
     3001 ggccttgcca gagagatcac ggtcgataca gacaagaaaa cagtagtggt ccatgacgga
     3061 tctacagccg gtggtttccc tctcgctagg gaaagttcta ttcaaggcct attccgcaaa
     3121 gccgacccga cagccgttgc gtggacaaag acaggcgcgg gcactgctga gactcagaca
     3181 gcaatttacg ctgaagtgaa cggctcgatc ctgaccgtag cgtccggcac gagcatcacg
     3241 atgccgacat tggccgcagg cacggattac gcaatctggc ttgaaacgga tggcgacttg
     3301 gttgcgacga caaaccacac aagcccacca actgccaatg cgcggaagct gggtggcttc
     3361 cactatgcgg cgggtgaaaa tgcgaccggc acatccggtg gtaacacgac ccctgcaatc
     3421 aacgaatact cattctggga tttgaagttc cgcccacatt gcgacccacg cggtatggcg
     3481 ttaatcgctg atggcttctg ggctgacatt tacctgacag gtgtagatca ccacaccaac
     3541 ggaacgtcta agtacaacgt aacaattgct gacggatcat cgccacctaa agtacctagc
     3601 aactttggcg gtaatggatc gactacctac ggctcttaca cttggtttga ggcgatggaa
     3661 ttgctgtcat cacacggcaa gcgcgccccg actcagcgtg agtttatggc actggcctat
     3721 ggcacaaccg aggcaacgtc acgtggtact gatcccgtta ccactcagat gtctgcgacc
     3781 gatgacaact tcacatcgaa gtggggcatc atgcagtcca ctggttgtct g
//
LOCUS       DATBNL010000586         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_36923, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000586 DATBNL010000000
VERSION     DATBNL010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36923"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1242
                     /locus_tag="VIC30_10125"
     CDS             <1..1242
                     /locus_tag="VIC30_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006387820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEY7804772.1"
                     /translation="LESNVSVNLVCVGTDGRPKQKSLKDMLLEWIEFRAATLLRRSQY
                     RLDKVLDRIHVLEGRMVVYLNVDEVIQTIRESDEPKPALMERFSLTDRQAEDILEMRL
                     RQLARLEGFKIEKELTDKRDEEKKLRTLIDKPSALRRLMVKEIEADAKQYGDERRTLI
                     EAAERAVLEVKVSDEPVTVIVSQKGWVRARQGHGHDASQFSFKSGDGYYGSYECRSTD
                     YLFVIGSTGRVYSVPVATLPSARGDGSPVTAMVDLEPGTQVAHLMASGADAHWLFTTA
                     HGLGFKAPARALISRQKAGKQFITVESGDTLLRPVRLLPEATRLALMSQRMRLAVIEL
                     AEVKQLSGGGRGTALLAVDDKDVLEQVVPVSAAGLSITGTFRNQTRTDVLVGDTLEPF
                     LSKRARKGRALQTRLKNPVLG"
     gene            1268..>1827
                     /locus_tag="VIC30_10130"
     CDS             1268..>1827
                     /locus_tag="VIC30_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY7804773.1"
                     /translation="MATYNITIEPTQHQFTASDDQNLLDAALAAGIVLPYSCRAGACS
                     SCKGRVVSGKYDAGLAPAQVLQAEELEAGYTLLCQAHALSDMVIESREVRLATDIQIR
                     KLPARVTRMRMPTPDVAILTLQLPSSETFRFYAGQYVEVILKDGSRRSYSMANSPDQA
                     SALELHVRHMPGGRFTDHVFGAGDTQ"
BASE COUNT          397 a          480 c          553 g          397 t
ORIGIN      
        1 ctggagagca atgtctcggt caacttggtg tgcgtgggga ccgatggacg tcccaagcaa
       61 aagtccctga aagacatgtt gcttgagtgg atcgagtttc gtgcggccac cttgttgcgt
      121 cgtagccagt atcgtttgga caaagtgctc gatcgcatcc atgtgctcga aggccgcatg
      181 gtggtgtatc tcaacgtcga cgaggtaatc cagaccattc gcgagtctga tgagccaaag
      241 ccggcgctca tggagcgctt tagcctgaca gatcgtcagg ccgaggacat tctggagatg
      301 cggctgcgcc aactcgcgcg ccttgaaggc ttcaaaattg aaaaagagct caccgacaaa
      361 cgagatgaag agaaaaagct ccgtacgctg attgacaagc catcggcgct gcgtcgtttg
      421 atggtcaaag aaattgaagc cgatgccaag cagtatggtg atgagcgccg caccttgatt
      481 gaggctgccg agcgcgcggt acttgaagtg aaggtcagcg atgaaccagt gactgtgatc
      541 gtctcgcaaa agggatgggt gcgcgcgcgt cagggccatg gccatgacgc ttcccagttc
      601 agctttaagt cgggtgacgg ctactacggc agttatgagt gccgcagcac ggattaccta
      661 tttgtgattg gctccactgg gcgggtttac agcgtgccgg tggctacctt gccgtctgcg
      721 cgcggcgatg gcagcccggt gactgccatg gtggatctgg agccaggcac gcaagtcgcg
      781 catttgatgg cctcaggtgc cgatgcgcat tggttgttta ccactgcgca cggcctgggc
      841 tttaaagcgc cagcccgtgc gttgatttcc cgacaaaagg ccggcaagca gttcattaca
      901 gtggagtcag gcgacacgct gttgcgtccc gttcgcttgc taccggaggc tactcggctt
      961 gcactgatgt cgcagcgcat gcgtttggcg gtcattgaac tggccgaagt caagcaattg
     1021 agtggcggcg gacgaggcac ggcattgctg gctgtggatg acaaggatgt gcttgagcag
     1081 gtggtgccgg tgagcgcggc tggcctgtca ataaccggta ctttccgaaa ccaaactcgc
     1141 acggacgtgt tggtcggtga tacgctagag cccttcctgt ccaagcgtgc gcgcaaaggg
     1201 cgcgcactgc aaacccgact taaaaatccc gtgcttggtt aagcacggca tacggcattg
     1261 aatactcatg gcaacttaca acatcaccat cgaacccacc caacatcagt tcaccgctag
     1321 cgatgatcaa aacctgctcg atgcagcgtt ggctgccggc attgttctgc cctacagttg
     1381 ccgtgctggc gcttgctcaa gctgcaaagg ccgagtggtc agtggcaagt atgacgcagg
     1441 gctggcaccg gctcaagttc tgcaagccga agagctagaa gcgggctaca ccttgctgtg
     1501 tcaggcacat gccttgtcag acatggtgat tgagtcacgt gaagttagac tcgccacgga
     1561 cattcaaata cgcaagctac ctgcacgcgt gacacgcatg cgcatgccaa cgcccgatgt
     1621 ggcgattctg acattacaac tgccgtcatc agagacgttt cgcttttatg ccggtcagta
     1681 cgttgaggtg attcttaaag atggcagtcg tcgcagttac tcgatggcca attcacctga
     1741 tcaggccagc gcgctggagt tgcatgtgcg acatatgcca ggcgggcggt ttaccgatca
     1801 cgtttttggg gcgggtgaca cgcaaat
//
LOCUS       DATBNL010000587         3361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87004, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000587 DATBNL010000000
VERSION     DATBNL010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3361
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87004"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..541)
                     /locus_tag="VIC30_10135"
     CDS             complement(<1..541)
                     /locus_tag="VIC30_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010401579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7804774.1"
                     /translation="MYHVVVVGGGFGGMAAALRARAKGHRVTVIDRCPRLGGRAQVFE
                     RAGFKHDAGPTVLTAPFLFEELFELFGQSLHERVKLVPLKPWYRFEFDDGEHFDYGGT
                     LEDTLAEIRRIHPPDVDGYHRLLEHSRKLYEIGFTKLSDRPFHSMGFMFAQVPHLARL
                     GAWRTVWQMVCRYLESDYLR"
     gene            complement(454..1440)
                     /locus_tag="VIC30_10140"
     CDS             complement(454..1440)
                     /locus_tag="VIC30_10140"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEY7804775.1"
                     /translation="MGTHHEVSASQLELWLESRLQTTELLMLSTVANTGSKGLDDLIA
                     YHFATKGARTRARLALLSAQALALPDRTCVALAACCELIHNASLLHDDIQDQDAERRG
                     QIAAWRKFDVNTAMCGGTLLLSAAYRVLANVPSYSAELTMHVHQRTTDLIAGQVKDLD
                     AVKQYPDMDAYLQITKGKSGSLLALPLELSLIAAREQSSLPMATAAAEAFAVAYQVID
                     DIKDHEADARGGHNNVIALLMREGCDQAQALDRAAVLAQEHLVLASTSARWLPSKSGQ
                     VLVDLCLQLKCLAQLPVGVEEQVVCTMLLWSVAGLVAWRQRCVRVPKAIASR"
     gene            complement(1532..2281)
                     /locus_tag="VIC30_10145"
     CDS             complement(1532..2281)
                     /locus_tag="VIC30_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010401582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriorhodopsin-like"
                     /protein_id="HEY7804776.1"
                     /translation="MDLTFGQYELIYNAFSFGTATFLAATLFFWLGLTQVAPKYKTAV
                     IITGLVTFIAGYHYLRIFASWGEAYTVIDGVVTATGVPFNVAYRYVDWLLTVPLLLVE
                     LILVMGLSREETVRKSIALGGAAALMIVLGYPGEVSGGIDSTRFIWGALSMIPFLYIV
                     VSLFSGLSESIAKQPESVRGLVSMARWVVILSWSFYPVVYFAPFVMSLDGGTATAVIE
                     VGYTIADVVAKAVFGVMIFMIAVRKSQSASA"
     gene            complement(3024..>3361)
                     /locus_tag="VIC30_10150"
     CDS             complement(3024..>3361)
                     /locus_tag="VIC30_10150"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: protein motif:HMM:NF014233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEY7804777.1"
                     /translation="ADPYAHQLDLKLVIDPTLVLIREDGMQHVFDYDPLLEQIHAISQ
                     NKHYETQEMLASRIVQCCASFKRIQSVEVCLKKYRSNGNGGTICGTIGVRLEVAGEQL
                     AALRGNGST"
BASE COUNT          940 a          923 c          790 g          708 t
ORIGIN      
        1 gacgcaaata gtcactttcc aggtaacggc aaaccatttg ccagaccgtg cgccaagcgc
       61 caagcctagc caagtgcggc acctgggcaa acataaaccc catgctgtga aatggtcgat
      121 ccgacagttt ggtaaatccg atctcgtaga gcttgcgtga atgctcgagc aaacgatggt
      181 agccatcaac atccggtggg tgaatgcgcc gaatctcagc caaggtatct tctaatgtgc
      241 caccgtaatc aaagtgctcg ccatcatcaa actcaaaccg ataccaaggt ttcagtggca
      301 cgagcttaac gcgctcatgc agagattgcc caaacaattc gaacaactct tcaaacaaaa
      361 acggtgcagt caatacagtg gggccggcgt cgtgcttaaa gcccgcacgc tcaaacacct
      421 gtgcgcggcc acccaatcta gggcaacgat caatcaccgt gacgcgatgg cctttggcac
      481 gcgcacgcaa cgctgccgcc atgccaccaa acccgccacc gaccacaaca acatggtaca
      541 tacgacctgt tcctctacac ccactggcag ctgagccaga cactttagtt gcaggcatag
      601 atccaccaag acctgaccac ttttacttgg caaccaccgc gcgctggtgc ttgccagcac
      661 cagatgctct tgcgccaaaa cagccgcccg atccagagct tgcgcttggt cacaaccttc
      721 tcgcatcagc agggcgatta cgttgttgtg cccaccacgc gcatcagcct cgtgatcttt
      781 gatgtcgtca atgacttgat aagccacagc aaaggcttca gcagcagccg tggccatggg
      841 cagactagac tgctcacggg ccgcgatcaa tgacaactcg agtggcaacg ccagcaaact
      901 gccagatttg cccttggtga tctgcaaata tgcatccata tccggatatt gcttaaccgc
      961 atcgaggtct ttgacttgac ccgcgattaa atcggttgtg cgctgatgca cgtgcatggt
     1021 gagttcagcg ctgtaggacg gcacattggc caacacacga taagcagccg acagcaataa
     1081 tgtgccgcca cacatagctg tgttgacatc aaactttcgc catgctgcta tttggccacg
     1141 tcgctcagca tcctgatcct gaatgtcatc gtgcaacaac gacgcattgt ggattaactc
     1201 acaacaagct gcgagcgcca cgcaggtacg atcaggcaaa gccagtgcct gggcactcaa
     1261 caaagccaaa cgtgcacgtg tgcgagcacc tttggttgca aagtgatagg cgatcaaatc
     1321 gtctagtccc ttcgaaccgg tgtttgcgac cgtgcttaac atcaataatt cagtggtctg
     1381 caagcgtgac tcgagccata actcaagttg cgacgcagac acttcatggt gcgtgcccat
     1441 cggcatatcc ctctaaaaac aatccccggc catacctgat gaccggggat tggttcgtgc
     1501 cagagataga acgtctacgt ttgacgcaaa cttatgctga cgcgctctgt gacttccgca
     1561 ccgcgatcat gaagatcatc acgccaaaca ctgctttggc aacgacgtct gcaatggtgt
     1621 aacccacttc aatcacggct gtggctgtac caccgtccag tgacatcacg aaaggcgcga
     1681 agtacacaac tgggtagaac gaccatgaaa gaataaccac ccagcgggcc atgctgacca
     1741 aaccacggac gctttcaggc tgcttggcaa tcgattccga cagacctgag aacaggctga
     1801 ccacgatgta aaggaaagga atcatcgaca acgcacccca gataaagcgc gttgagtcga
     1861 taccaccaga gacttcgcct gggtaaccca aaacgatcat caaggcagct gcgccaccaa
     1921 gggcaatact cttgcgaact gtttcttcac ggctcaaacc catgaccaga atcaattcaa
     1981 ccaacaacag aggaaccgtc aggagccaat cgacatatcg ataggcaacg ttaaacggca
     2041 caccagtggc tgtgacaaca ccatcaataa ccgtgtaggc ctcaccccag ctcgcgaaaa
     2101 tacgcaagta gtggtaaccg gcaatgaagg tcaccagacc cgtgataatg actgctgtct
     2161 tgtatttcgg ggctacttgg gtaagtccca accagaaaaa caaagttgca gcgaggaagg
     2221 ttgccgtccc gaatgagaag gcgttgtata tcaattcata ctgaccaaac gttaagtcca
     2281 tttgaacgat ctccgtgaaa aaagttaaac gtcgacgttc caaggcccaa gtcgaatgct
     2341 gttagcaaca cagcctaagg gggcaggtca tttaagttag ccaagtcggt gttccccatc
     2401 gactacccaa acatgctggc gtggacttgg cgtgtattgt tatctgacca gaacgcctcc
     2461 actctacgcc tacatatggt gcatacgcaa ctgattagtt caaaaaatat actcagggtt
     2521 tacgccacta aatgatgggt tactgcaagc ctagcggtac taatgacagc cagacatgtc
     2581 gaaccgagca aacgaattgt gatcacacat gagactcaga tcgcaacagc cgctatccca
     2641 gtgactcgaa gtcagacgat aagcattcgg ctagagaaga caatcgaaac agcgggttaa
     2701 cccagcgaat cgctcaaacg gcaaacgccg cttggtgatg ttttgtgtat gtatgatttt
     2761 gtaagtcaaa catttacttt tgtcggatga aagatcgcga gctcattgag gccgagcatt
     2821 tcaatgttgg cgaagtcatt aagcgacacc caaccgacaa caaacccgca tcgatttcaa
     2881 caaaataaaa gtaggggttt tttgaacaaa aaaccacaga acaggcactg gtagacgatt
     2941 tacaacagcg cgtcaaagag aaataacaca agtgctgtca gtttcaggcc gtcggtttca
     3001 tcggacagaa tggtttgggg ggatcacgtt gatccattgc ctctgagtgc agcaagttgc
     3061 tcgccagcaa cttctaaccg aacaccaatc gtgccgcata tggtgcctcc attgccattg
     3121 gatcggtact tctttaagca gacctcaaca gactgaatgc gcttaaaact tgcgcagcat
     3181 tgcacaatcc ggcttgccag catttcctgg gtttcgtaat gcttattctg agagatggca
     3241 tgaatctgtt cgagcaaggg atcatagtca aagacatgct gcatgccatc ttcccgaatc
     3301 aacaccagag tcggatcgat cacgagcttt aaatcaagct ggtgtgcata gggatccgca
     3361 t
//
LOCUS       DATBNL010000588         2049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_185146, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000588 DATBNL010000000
VERSION     DATBNL010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185146"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1311)
                     /locus_tag="VIC30_10155"
     CDS             complement(<1..1311)
                     /locus_tag="VIC30_10155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804778.1"
                     /translation="MTSPITVLPKRYTLSLAMALATSALAILPSIAPTNVQAKASAPL
                     QIPDIYTNLEVGADGKLTAKTSDGKRLSLRDETPVHTIAQMSDNIEGVDDGFVISFTD
                     PTYNLVMKGGNVFYALIDTSARLPMPMFRPVAKIDDTGRARLQVVKNLSGEKDFIDWG
                     KTGRGHMYYRVQSPTGELVYDGMFAFTAGSPKGPFKVLSGSIKSGPFIEKLTSQSAAI
                     SFVTRAAVPGKVEIEGHGTVETPAAMAHTAEISGLNPDTEYAYRVVTTDDTLAGSFRT
                     APAKGARQPFTFAFGSDSRAGIDSGERHEQGVNQYILRRTMALVLDREAAFFQFTGDM
                     INGYNNNPGITQYQFDGWKRAVSPFTAHMPLNTAPGNHEVVLYTFDDGTKDGVEIPRF
                     PFATESSEAVFRSRFKNFSNGPKSEDGSALDPNPNQVDFPDYAET"
     gene            complement(1425..>2049)
                     /locus_tag="VIC30_10160"
     CDS             complement(1425..>2049)
                     /locus_tag="VIC30_10160"
                     /inference="COORDINATES: protein motif:HMM:NF013406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015655 - alanine:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA];
                     GO_process: GO:0032328 - alanine transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HEY7804779.1"
                     /translation="AGLKRGLFSNEAGLGSAPNVAATADVKHPVSQGIIQSLSVFIDT
                     LVICSCTAFVILLSPVYQPGGDLTGAPLVQHALSSHFGHWAEYLLTFLLFLFGLSSII
                     YNYYLGETAVYEFSTSETARMILRVLVVACVMLGAAAPQATSVFFFSDPLMGLLAVVN
                     LMVIVSLVPIVLRLLKDYREQLRSGNESPVFSPDQFPELDVDRKAWK"
BASE COUNT          475 a          551 c          557 g          466 t
ORIGIN      
        1 cgtctcggca tagtcaggaa agtccacttg attgggatta gggtctaagg cagaaccatc
       61 ttcactcttg gggccattgc taaagttctt gaaacgactg cgaaacacag cttcggaact
      121 ttccgtggca aacgggaagc gtgggatttc gacaccgtct ttggtaccgt catcgaaggt
      181 atagagcacc acttcgtggt tacccggtgc ggtattcaag ggcatgtgcg cagtgaatgg
      241 gctaacagca cgcttccagc catcaaactg gtactgcgtg atgcccgggt tgttgttgta
      301 gccgttaatc atgtcaccgg tgaactgaaa gaatgcggct tctctatcta gcaccaacgc
      361 catggtccga cgcaggatgt attgattaac gccctgctca tgacgctcac cactgtcgat
      421 gccggcccgt gagtccgagc caaaggcaaa cgtaaagggc tgtctggcac ccttggcagg
      481 tgcggtgcgg aaactgcctg ctagcgtgtc gtcagtcgtg acgacacggt atgcgtactc
      541 ggtatcaggg ttcagtccgc tgatttcggc cgtgtgtgcc atggcagctg gcgtttcaac
      601 agtgccgtga ccttcgattt ctactttgcc gggtacggcc gcgcgtgtga caaatgagat
      661 tgctgcactt tggctggtga gtttctcgat gaaaggtcct gacttgatgc tgcctgagag
      721 gactttaaaa ggccccttgg gacttcctgc ggtaaacgca aacatgccgt cgtagactaa
      781 ctcaccggtg ggtgactgca cgcgataata catatgcccg cgaccggtct taccccagtc
      841 aatgaagtct ttttctccgg aaaggttctt aaccacctgc aaacgggccc gaccggtgtc
      901 gtcgatcttg gccacgggcc gaaacatcgg catgggcaag cgcgcactcg tgtcgatcaa
      961 tgcgtagaac acgttgccac ccttcatcac caggttgtat gtggggtccg tgaaactgat
     1021 cacaaacccg tcatccacgc cttcaatgtt gtcgctcatc tgggcgatgg tgtgcaccgg
     1081 tgtctcatcg cgcaacgaca agcgcttgcc atcagaagtc ttggccgtta gtttcccatc
     1141 ggcgcccact tcaaggttgg tgtagatgtc cgggatttgc agcggcgcgc tggctttggc
     1201 ctgcacattc gtgggggcga tcgaaggcag gatggccagt gcggacgtgg ccagtgccat
     1261 tgccaggctt agggtgtagc gctttggcaa aacggtaatt gggcttgtca tggaaggggc
     1321 tccgtagcga cgttcaagtt ctcttagatt agccaccatc cacgacaagt tcatgacaaa
     1381 aagctcggtt tttaggccac tctttcaggt cactttttat ttcactactt ccacgctttg
     1441 cggtctacat cgagctccgg gaactggtct ggactgaaca ccggtgactc gttaccactt
     1501 cgcaactgtt cgcgatagtc tttcagcaat cgcaacacaa ttggtacgag cgagacgatc
     1561 accatcaggt tgaccaccgc caaaagtccc atcaatgggt ccgagaaaaa gaacacggac
     1621 gttgcctgtg gggcggccgc accaagcatg acgcaagcca cgactaagac gcgcaggatc
     1681 atgcgtgcgg tttccgatgt actgaactca tagacggctg tttcaccaag atagtagtta
     1741 tagataatcg agctcaagcc gaataaaaac agtaagaaag tgagcaaata ttccgcccaa
     1801 tgcccgaagt gtgagctcag cgcatgttgc accaatggcg cgccagtcaa atcaccaccc
     1861 ggttgataga ccgggctcaa caagatcaca aaggccgtgc atgagcagat caccaaggtg
     1921 tcaataaaca ccgacagtga ctggataatg ccttgcgaga cagggtgctt gacatcggcg
     1981 gtcgcagcca cgttcggtgc cgaacccaaa cccgcttcat tagagaataa cccacgcttc
     2041 aaacccgct
//
LOCUS       DATBNL010000589         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96655, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000589 DATBNL010000000
VERSION     DATBNL010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96655"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /gene="obgE"
                     /locus_tag="VIC30_10165"
     CDS             <1..929
                     /gene="obgE"
                     /locus_tag="VIC30_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012415960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEY7804780.1"
                     /translation="FSRKHVARNGENGRGSDQYGAGADDVVLRLPVGTVIYDADTNEL
                     LFDLDKHGESVVLAKGGEGGLGNLHFKSSVNRAPRKFTYGKEGEQRRLRLELKILADV
                     GLLGMPNAGKSTLISKISNARPKVADYPFTTLHPNLGVVRTSPSKSFVVADIPGLIEG
                     AAEGAGLGHLFLRHLSRTRVLLHLVDLSSMNPDEDRIEVAVAEMHAIEGELRKYDAEL
                     YAKPRWLVLNKFDMIDNAQEVTQQFIEQSQWQGPVYAISALNGDGTQQLIYDLQGMLD
                     KSKADEQRAQDIADGTAEFEDPRFDPNRDSQA"
     gene            926..>1901
                     /gene="proB"
                     /locus_tag="VIC30_10170"
     CDS             926..>1901
                     /gene="proB"
                     /locus_tag="VIC30_10170"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEY7804781.1"
                     /translation="MTIDTPAPVKTSARLVVKVGSSLVTNDGQGLDLAAVGQWCEQIA
                     HLHQAGKQVVLVSSGAIAEGMARLGWKRRPSEMHELQAAAAVGQMGLAQAYESAFAKH
                     GLKTAQVLLTHEDMADRRRYLNARSTLLALLRFGIVPIVNENDTVSTDEIKVGDNDTL
                     GALVANLVEAESLVILTDQAGLFNQDPRHNPNARLITRAQADDPTLVPMAGGAGSHLG
                     KGGMLTKVLAAQRAAKSGASTIIASGREANVLTRLADGESIGSTLLASEPTWSARKQW
                     MADNLRLRGRLILDTGAVKALLQDGKSLLPVGVRDVEGVFEQGDLVACI"
BASE COUNT          454 a          558 c          517 g          372 t
ORIGIN      
        1 gtttctcacg caaacacgtc gctcgcaatg gcgagaacgg ccgtggctcg gaccagtatg
       61 gtgccggcgc ggacgatgtc gtcttacgct tgcccgtcgg taccgtgatt tacgatgccg
      121 acaccaacga actgctgttt gacctcgaca agcacggcga gtccgtcgtg ctcgccaaag
      181 gcggcgaagg cggcttaggt aatttgcact ttaagtcgag cgtgaatcgc gccccacgca
      241 agttcacgta cggcaaagaa ggcgagcaac ggcgcctgcg cctcgaactg aagatcttgg
      301 ccgatgttgg cctattgggc atgcccaatg ccggcaagtc aacgcttatc agcaagattt
      361 ccaacgcacg tcctaaagtc gccgactacc cgttcacaac cctacacccc aaccttggcg
      421 tggtgcgaac atcaccctca aaaagctttg tggtcgctga cataccgggt ctgatcgaag
      481 gtgctgcaga aggcgcgggc cttgggcacc tgtttttacg gcacctatca cgcacgcgcg
      541 tgttgttgca tctcgttgac ctttcatcca tgaaccctga tgaagatcgc attgaggtgg
      601 ccgtagctga aatgcacgct atcgaaggtg agttgcgcaa atacgatgcc gagctttacg
      661 ccaaaccccg ttggctggtt ttgaacaaat tcgacatgat tgacaatgcc caagaggtca
      721 cacaacagtt cattgagcaa agccaatggc aaggacccgt ctatgccatt tcagccttaa
      781 acggcgacgg cacccagcaa ctgatctatg acctgcaagg catgctcgac aaaagcaaag
      841 ccgacgagca acgcgctcaa gatatcgcgg acggcaccgc cgaattcgaa gacccccggt
      901 ttgaccccaa cagagacagc caggcatgac catcgataca cccgctccgg ttaagaccag
      961 cgcccgtttg gtggtcaaag tcggctctag tctggtgacc aacgacggcc agggactaga
     1021 ccttgcggca gtcggtcaat ggtgcgaaca gatcgcccac ctgcatcaag ccggcaaaca
     1081 ggtggtgctg gtctcaagcg gcgccatcgc agagggcatg gcgcgactcg gctggaagcg
     1141 ccggccaagt gaaatgcatg aattgcaagc tgccgctgca gtgggccaaa tgggattggc
     1201 acaagcctat gaaagcgcct ttgccaaaca cggcctaaaa accgcacaag tgttactcac
     1261 ccatgaagac atggcagacc ggcgccgcta tctcaacgcg cgctcaacct tgctggcttt
     1321 attgcgattt ggcattgtgc ccatcgtcaa cgagaacgac accgtctcaa ccgatgaaat
     1381 caaagtcggt gacaacgaca ccctcggtgc attggtcgcc aacctcgttg aagcagaatc
     1441 gctcgttatc ctgacggatc aagctggact ttttaaccaa gacccacgtc acaaccccaa
     1501 tgccagactt atcacacgcg cccaagccga tgacccaacg cttgtgccca tggccggcgg
     1561 tgccggcagt catctaggta agggtggcat gttgaccaaa gtactcgcag cccaacgtgc
     1621 cgctaaaagc ggtgcgtcaa ccatcatcgc atccggtcgt gaagcaaatg ttctgactcg
     1681 tttggctgat ggcgagtcca tcggctcaac gttactggcc agtgaaccca cttggtccgc
     1741 ccgcaaacag tggatggcag acaacttgcg cctgcggggt cgcttgatac tcgacaccgg
     1801 tgcggtcaaa gccttgctcc aagacggcaa gagcctgcta ccggtggggg tacgtgacgt
     1861 agaaggtgtg tttgagcaag gtgatcttgt cgcatgcatt g
//
LOCUS       DATBNL010000590         2918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_76777, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000590 DATBNL010000000
VERSION     DATBNL010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76777"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            29..904
                     /locus_tag="VIC30_10175"
     CDS             29..904
                     /locus_tag="VIC30_10175"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7804782.1"
                     /translation="MKFDNYHQISRTQRAQLFRQRVQQTMQDKGMNRSQLADRSHVDR
                     STISLLLSDVQLRLPTGHVVAQIAGALSVTTDWLLGLTTDTQVASELLRQSLEVAETS
                     GFGPDNHTERWMIEFQDAKVRNVPVSLPELMKTDKVVQLEYGKNPDRSVDQAKDDSAA
                     QLANVRLPGRDVEFAMPWQSMAQLTQRAGVWAQLSVKETQRQIAQMADLCEELYPATR
                     LHLFDLANHYSAAISVFGQRRAVVYIGTGYLVFHSTQHVAFLTRQFDTLVKNAVVRSD
                     EVHQWLREQLPKVRH"
     gene            complement(917..1465)
                     /locus_tag="VIC30_10180"
     CDS             complement(917..1465)
                     /locus_tag="VIC30_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEY7804783.1"
                     /translation="MSGVLRPWLLDLAQAGLFEPVWSERIGREWRRNAARIWSIEPAL
                     LDQEWQHMQTRFSSANVSSWTDIGTTMPPLKYSDAKDWHVIEAAWLAKQAHPDQAVGI
                     VTVNIKDFSRSELRQRGLDLWAPDRLLSSWHETHATLLTQSLHAVIAELVSTGRRHPA
                     PVSDFLKRERLFRLNKRVTAQL"
     gene            complement(1479..>2918)
                     /locus_tag="VIC30_10185"
     CDS             complement(1479..>2918)
                     /locus_tag="VIC30_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008903286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEY7804784.1"
                     /translation="AAYAAAAAYEGQPTVILAQTKKGYGMGTAGQGKMTTHSQKKLER
                     EDLISFRNHFNLPLSDDEAASLRFYKPAPDTPEMQYLHAKRQALGGYLPKRDVTCEAL
                     PVPALTHWGKFALASDNKDMSTTMAFVRMLGNLLKDKTLGPRLVPIVADEARTFGMAN
                     LFKQVGIYSSVGQRYLPEDIGSILSYHEAKEGQILEEGISEAGAIASWTAAATSYSAH
                     GLATLPFYIYYSMFGFQRVGDQIWAAADQNPRGFLIGATSGRTTLGGEGLQHQDGTSH
                     LIAATIPNCKAYDPAFAGELAIIIDQGMREMVQEQKNVFYYITTMNENYPQRSVDESM
                     RAHILKGGYRLMQLAPESQSTDHSTQQPINLMASGAILPEAITAAQELCQQGRIVNVY
                     SITSWSELSRDQTGWVAEMLSDNDGPVIGASDYVRAVPESIRQHMPAHQRFVTLGTDG
                     FGRSDTRAELRDFFGVSAKHIVHAALSCS"
BASE COUNT          635 a          746 c          821 g          716 t
ORIGIN      
        1 tttatttaac aaaaacgttt aatttgtcat gaaatttgat aactatcatc aaatcagtcg
       61 aacgcaacgc gctcagctgt ttaggcagcg ggtgcagcag accatgcagg acaagggcat
      121 gaatcgtagc cagttggcgg atcggtccca tgtcgatcgg tcgacgattt cgttgttgtt
      181 gtccgacgtg caactgcgtt tgcctactgg tcatgtggtc gcgcagattg caggtgcttt
      241 aagcgtgacc actgattggt tgttgggatt gaccaccgac actcaagtgg ccagtgaatt
      301 gctgcggcag tcactcgaag tggctgagac gtctgggttt ggaccagaca atcataccga
      361 gcgctggatg attgagttcc aggacgccaa ggttcgtaac gtgccagtca gtttgcctga
      421 gctcatgaaa acagacaaag tggtgcaact ggagtatggc aagaatccag atcgatctgt
      481 tgaccaagcc aaggatgaca gcgccgctca attggccaat gtgcgtttac cagggcgtga
      541 tgtggagttc gccatgccct ggcagtcgat ggcacagctg actcaaaggg ctggtgtctg
      601 ggcgcaactg tcggttaaag aaacgcagcg acaaattgct cagatggccg acctgtgtga
      661 agagctttat ccggccacgc gcttgcactt attcgatctg gcgaatcatt acagcgcggc
      721 catcagcgta ttcggtcaac gccgtgccgt tgtctacatc ggaactggtt atctggtgtt
      781 tcattcaacc cagcatgtgg cctttctgac cagacagttt gataccttgg ttaaaaatgc
      841 ggtggtgcga agtgatgagg tccatcagtg gttgcgcgag caactgccca aggtgcgtca
      901 ttgagttgtc actgagctat aactgagctg tcacgcgttt gttcaaacga aacaggcgct
      961 ctcgctttaa gaaatctgag accggtgccg gatgccggcg gccagtgctc actagctcag
     1021 cgatgaccgc gtgaagagat tgggtcagca gcgtggcgtg tgtctcatgc cagctcgaga
     1081 gcagtcgatc tggcgcccaa aggtctagcc cacgctggcg caactcactg cggctaaagt
     1141 ctttgatgtt gacggtcacg attccgactg cttgatcggg atgggcttgt ttggccagcc
     1201 atgcggcttc gatgacatgc cagtctttgg cgtcgctgta tttcagcggg ggcatcgttg
     1261 tgcctatgtc cgtccaactt gaaacattgg ccgaggaaaa ccgcgtctgc atgtgctgcc
     1321 actcttggtc gagcaaggcc ggttcaatag accaaatgcg tgcggcgttg cgtcgccatt
     1381 cccgaccaat tcgctcagac caaaccggtt cgaacagacc cgcttgcgcc aaatccaaaa
     1441 gccagggtcg taagaccccg gacatcaaca cacaagcatc aagaacaaga taaggcggca
     1501 tggacaatat gtttggcact gaccccaaag aaatcccgaa gctcggcgcg tgtgtcactg
     1561 cgcccaaacc catcggtacc taaggtgaca aagcgttgat gcgctggcat atgttgacga
     1621 atcgattcgg gtactgcgcg cacataatca ctggcaccga tcactggacc gtcattatcg
     1681 ctcaacatct cagccaccca gccggtttgg tctcgtgaca gctcactcca actcgtgatg
     1741 ctgtagacgt tgacaatgcg tccctgctgg cacagttctt gggcagcagt gatggcctct
     1801 ggcaaaatcg cgcctgaggc catcaggttg attggctgtt gtgtgctgtg atcagtgctt
     1861 tgcgattcag gtgcgagttg catgaggcga tacccgccct taaggatgtg tgctcgcatg
     1921 ctttcgtcca cactgcgttg ggggtagttc tcgttcatcg tggtgatgta atagaaaaca
     1981 ttcttttgtt cttgcaccat ctcacgcatg ccctgatcga tgatgatggc cagctcacca
     2041 gcaaaggcag gatcataggc tttgcaattc gggatggtgg cagcgatcaa atggcttgta
     2101 ccgtcttgat gttgcaaacc ttcaccaccc aaagtggtgc gtcctgatgt cgccccaatc
     2161 agaaaccctc gtgggttctg gtctgcagct gcccagatct gatcgccaac ccgttggaat
     2221 ccaaacattg agtagtaaat ataaaagggc agcgtggcca agccatgtgc actgtagctc
     2281 gtggccgcag cggtccagct agcgatggct ccagcttcag agatgccttc ttcaaggatt
     2341 tgaccttcct tggcctcgtg gtaactcagg atcgagccta tgtcttccgg tagataacgt
     2401 tgaccgactg aggagtagat gcccacttgt ttaaaaagat tggccatacc gaaggttctg
     2461 gcctcgtcag cgacgatcgg tactaaccgt ggacccaggg ttttgtcttt gagcagattg
     2521 cccagcatgc gcacaaatgc catcgttgtg ctcatgtctt tgttgtcaga ggccagcgca
     2581 aacttgcccc aatgtgtcag tgctggcaca ggtagcgcct cgcacgtgac gtcgcgttta
     2641 ggtaggtaac ccccaagtgc ttggcgcttg gcgtgtaggt actgcatttc gggcgtatct
     2701 ggtgctggtt tgtaaaaacg caggctggcg gcctcgtcat ctgagagcgg caggttgaag
     2761 tggttgcgaa atgaaatgag gtcttcgcgc tcgagctttt tctggctatg ggtggtcatc
     2821 ttgccctgac cagctgttcc catgccatag ccttttttgg tttgtgccag gatcactgtg
     2881 ggctgacctt cataggctgc tgcggcggcg taagcagc
//
LOCUS       DATBNL010000591         4474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_36964, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000591 DATBNL010000000
VERSION     DATBNL010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4474
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36964"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VIC30_10190"
     CDS             <1..572
                     /locus_tag="VIC30_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804785.1"
                     /translation="DGIATENNQFYQTDVIVTGAAQSDEVALTSSQGTVTIVLGQRTG
                     SDISSSGNCAVVERSAVISNEQGSDNLGLGEGGGDASSTVSNSVSDSVSDSSSSIVTG
                     PDQAGFIQAIVEEELGQSGQSSTSAGSLDSRLVTGEQALQTPASAQGNAMAGQSNEVL
                     FDAEIEVGEIDAFTCEAPPTNIVIQPEDC"
     gene            711..1388
                     /locus_tag="VIC30_10195"
     CDS             711..1388
                     /locus_tag="VIC30_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804786.1"
                     /translation="MLRTQTFKNIALSCLPALGLWSFTGDVSAAETGLRASSERGFTG
                     FSIYTATGYQNATTKATDLRVQGTNLTLPSRSESKDSTFWLVGLDYTYVFDNQLSLGA
                     QFDYYPKSGQYALSVSPGYEFNDRVLGYVRLGWVNVPTTIEPGGGRPNYKVWQNAYFA
                     GIGAKVNLYRGIYGYAELRYSEVERLNFTGTADVTVAPGVVQSVPIQGSADTTAVNAF
                     IGLGYRF"
     gene            complement(1408..2127)
                     /locus_tag="VIC30_10200"
     CDS             complement(1408..2127)
                     /locus_tag="VIC30_10200"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7804787.1"
                     /translation="MSEQTNLAIAIVEDDIILREELSTFLVTQGHVVHALISGTALDD
                     LFQETSVDIIILDLNLPGQSGFEIAQRYRASYPELGIIILSARTATMDRISSYDNGAD
                     IYMPKPCPPGELLAAIKSLSRRVKPSQSTDAWQLDLVRYVLVSANGSVTIQLLAVEAH
                     IIELLARAPKHQMSAEDLCVLVAENGPDGESCEALTRRALENKISRLRKKFAEDTKTE
                     PTIIRSIRNEGYQLCIPVHVL"
     gene            complement(2120..3199)
                     /locus_tag="VIC30_10205"
     CDS             complement(2120..3199)
                     /locus_tag="VIC30_10205"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY7804788.1"
                     /translation="MAYGIVAVMVIPVWFGFNQVSSILTLVFAVLVFPVGQIIAIGMT
                     RGIRPIYQRILISGFALGTLGMWTALLVVLYPTDNPLLPIQISRIIDYANPVVLLGLV
                     MFHYRETIWQLAATREENVAIKLGLELEQKLREERKLMVDMLTHELKNPLASISLASG
                     SLATSVKADDGLTKRRLENIEQSVRSMDAVIERCNIMNQLDQSALAPNMSKIGLKEML
                     SDAIARLADGRRVKLAIEGPNEFATDAQFFQMIVSNLIDNALKYSHTDSDVNLLISRV
                     TDKSEAMLVMKVTNQIGSKGSPDSDLVFTRFYRHKLAHRTSGSGVGLYLTKELITLMG
                     GRITYHPDDHQVTFCVTLPETRPNV"
     gene            complement(3218..3715)
                     /locus_tag="VIC30_10210"
     CDS             complement(3218..3715)
                     /locus_tag="VIC30_10210"
                     /inference="COORDINATES: protein motif:HMM:NF019315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7TM diverse intracellular signaling
                     domain-containing protein"
                     /protein_id="HEY7804789.1"
                     /translation="MFDGQTGQRVGGPVGLAYPYSPEHGLLVGYTFSVTPSSVGEHNY
                     YVRVLTSTLPYAFVEATLDPVTAQTMSQQIGLGIRLGVVSLLVFISASVYAVTRTPIM
                     GVFFIVILNLLLNTLAGSGLLFQYLWPNSPRFNEFFFSTMAYLRPGLWVWLAQTFLAS
                     YQTPA"
     gene            4224..>4474
                     /locus_tag="VIC30_10215"
     CDS             4224..>4474
                     /locus_tag="VIC30_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804790.1"
                     /translation="MKPTRTRLLSKILLAASALGVAQVANAACMQQAITERQSFLRLN
                     PGDDICATNSGSIQASDSGQSAGVQILGPGQGSATLVLT"
BASE COUNT         1085 a         1113 c         1211 g         1065 t
ORIGIN      
        1 ccgatggcat cgccaccgag aacaaccagt tttatcagac agatgtcata gtcaccggag
       61 cagcgcaatc tgacgaggtg gcgctcacta gtagtcaggg tacggtaacg atcgttttag
      121 gccagcgtac aggttctgat attagctcta gcggcaactg cgcggtggtt gagcgttcgg
      181 cggtgatcag taatgaacaa ggtagcgata acctaggctt aggagaaggc ggtggcgatg
      241 ctagcagcac tgttagcaac agtgtcagcg acagtgtcag cgacagcagt agctctattg
      301 tgactggccc cgatcaggcc ggctttattc aggccatcgt tgaagaggaa ctggggcaat
      361 cagggcaatc gagcactagc gcaggcagtc tcgacagccg acttgtgact ggtgaacagg
      421 cgttgcagac acccgcaagc gcacagggca acgccatggc ggggcagtcc aacgaggtgt
      481 tgtttgatgc tgagattgaa gtcggggaga ttgacgcctt cacatgtgag gcaccgccca
      541 cgaacattgt tatccaaccc gaggattgtt agataggacg gggaggttta ttcggcggca
      601 tagggatcct aacgagctct aaaagtatcc aatgccccct aaaacgattc aaatcctctt
      661 aggattcgat ataaagcaac gggtgtaagt ttcgcgggta caatcgccca atgcttcgta
      721 ctcaaacctt taaaaatatc gctctatctt gtttgccagc ccttggtctt tggtcgttta
      781 ctggtgatgt gtcagcggct gaaacggggc tacgcgcctc ctcagaacgt ggtttcactg
      841 ggttttcgat ctacacggca accggctatc aaaacgctac taccaaagcc accgatctgc
      901 gcgtccaagg cacaaacttg acgttgccat cacgtagtga gtcgaaagac agcactttct
      961 ggttggtggg tttggactac acgtacgtgt ttgataacca actctcgcta ggtgcccagt
     1021 ttgattacta ccccaagagc ggtcagtacg ccttgtctgt gagccctggt tatgagttca
     1081 atgaccgggt tttaggctac gtgcgattgg gctgggtcaa cgtgccaacc accattgaac
     1141 ctggcggtgg ccgaccaaat tacaaggtct ggcaaaacgc ctactttgcg ggtatcggtg
     1201 ccaaagtcaa cctctaccgc ggcatatacg gttacgctga gttacgttac tcggaagtag
     1261 agcgcttgaa ttttacgggc acagctgacg tgacggttgc gccaggtgtg gttcagtcgg
     1321 tgcctattca ggggtcggcc gatacgacag cggttaatgc gtttattggc ttgggttatc
     1381 ggttttaagt tcaacggtgc cttcgattca aagcacgtgc acaggtatac acagttgata
     1441 gccctcgttg cgtattgagc gaatgatcgt gggctcggtt tttgtgtctt cagcgaactt
     1501 tttacgcaat cggctgatct tgttttctag ggcgcggcgg gttagtgcct cacaagactc
     1561 accgtctggt ccattttctg cgaccagtac gcacaggtct tcagcactca tctgatgctt
     1621 aggcgcgcgc gccagcagct caatgatgtg tgcttcaacg gccagcaatt gaatggtcac
     1681 agaaccattg gcactgacga gcacatacct aactaggtct agttgccagg cgtctgttga
     1741 ttggctaggc ttgactcgcc gtgacaggct tttaatggcg gctaacagtt cgcctggcgg
     1801 gcatggcttg ggcatgtaga tgtcagcccc gttgtcgtag ctgctgatgc ggtccatggt
     1861 cgcagtgcgt gccgacagaa taatgatgcc gagttccggg tagcttgcac gataacgctg
     1921 ggcaatctcg aatccgctct gaccgggcag gttcagatct aggatgatga tgtccaccga
     1981 tgtctcttga aacaaatcat ctagcgccgt gccactgatc aacgcatgca ccacatggcc
     2041 ctgcgtcacc aaaaacgtgc tgagttcctc acgcaggata atgtcgtctt ccacaatcgc
     2101 aatggcaaga tttgtctgct cagacattgg gtcttgtctc cggcaacgtg acgcagaagg
     2161 tgacttgatg gtcatccggg tgataggtga tgcgaccacc cattaaggtg atcaattctt
     2221 tggttagata tagccctaca cctgagccag aggttcggtg tgccaatttg tgccggtaaa
     2281 aacgtgtgaa caccaagtct gaatcgggtg aaccttttga gccgatttga ttggtgactt
     2341 tcatcacaag catcgcttct gatttatctg ttactcgaga gattaatagg tttacatctg
     2401 agtcagtgtg agaatacttc agtgcattat cgatcaagtt cgacacaatc atctgaaaaa
     2461 actgagcgtc agttgcaaat tcgtttggac cttctatggc tagtttgacc cgtcgtccat
     2521 cggcaagccg ggcaatggca tcggacagca tttctttgag accgatcttg gacatattcg
     2581 gtgccaatgc gctttgatcg agctggttca tgatgttgca acgttcaatc accgcatcca
     2641 tgctgcgcac tgattgttca atattctcaa gccgtcgttt ggtcaagccg tcgtcggctt
     2701 tgaccgatgt ggcaagcgac ccactagcga ggctaatgct cgccagtgga ttttttagtt
     2761 catgggtcag catgtcaacc atgagcttgc gctcttcgcg cagcttttgt tcgagctcca
     2821 agccaagctt aatagcgacg ttttcttctc gggtggcggc taactgccaa attgtctcgc
     2881 ggtaatgaaa catcacgagt cctaacaaca ccaccggatt ggcatagtca atgatccggg
     2941 atatctgaat cggtaaaagc gggttgtcgg ttgggtaaag gacaactagt aacgccgtcc
     3001 acatacccag tgtgcctaga gcaaagcccg aaattagaat gcgttggtaa attgggcgga
     3061 tgccacgagt cataccgatc gcaatgattt gccccacagg gaacacaagc accgcaaata
     3121 ccagcgtaag gatgctacta acttgattaa atccaaacca caccggtatg accatcacag
     3181 caacgatgcc gtaagccaag cgacaactcg gtcgatatca agctggtgtc tgataggacg
     3241 ccaggaatgt ttgtgccagc cacacccaca ggcctgggcg cagataagcc atggtgctaa
     3301 agaaaaactc gttaaaccgt ggcgagttgg gccacagata ctgaaatagg agtccggacc
     3361 cagccagggt gtttagcaac aagttcagaa tcacgataaa aaacacaccc atgattggcg
     3421 tgcgggtcac cgcatatacg gatgcactga taaacaccag cagacttacc acgcccaagc
     3481 gaatgcctaa gccaatctgc tggctcatgg tttgggcagt gacagggtca agtgtggcct
     3541 ctacaaacgc atagggcaaa gtggaggtga gtacacgaac gtaatagtta tgctccccaa
     3601 cgctgctggg ggtaacggag aaggtgtaac cgactagaag cccgtgctcg ggtgagtaag
     3661 ggtatgccaa gccgactggg ccaccaactc gctgcccggt ctgcccatca aacacttcca
     3721 cctcacgtaa aagatgaggg ccgacattga tcgtcagtgc ctgtgatgcg tcagcggttc
     3781 ggacatgaac tttgatccaa cgtaccgcat tgccttgtgc agttgggtct gagtcagcgt
     3841 agctggcgta ctgacattat ttggcttggt caaacgtcag gcgatctgcg ccgctggcgc
     3901 aatattggac tgtgactgct tgagcgctag attccgttgc taatgcggtg ccgatagata
     3961 agcctgccat cactagcagg cacagtgatg cgatcagcac cctaaatagg cgagggtagc
     4021 tggcaatgcg ctgagcggca gtgattcgat aggcaaacac gatttgtata cgtgaaactc
     4081 ggtttagcgt aatttaccgc ctcatcttaa tcggtgaggt tcaagctcgc gtgagagact
     4141 gtgagagaaa acttcaccaa cagcttggta caaccggcga tcggcgcaag cggatatccg
     4201 accaatcact ggatcatgac tccatgaaac cgacacgtac gcgccttttg tcaaagattc
     4261 tattagcagc tagtgcgctc ggtgtggcgc aggtagccaa cgctgcttgc atgcagcaag
     4321 ccatcacaga gcgacagagt tttttaaggc tgaatccagg cgacgatatc tgcgccacca
     4381 attctggttc aattcaagcc tcagacagcg gacaatctgc tggggtgcaa atcctgggtc
     4441 cgggccaggg gtcagcaacg cttgtattga ccaa
//
LOCUS       DATBNL010000592         2308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_176109, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000592 DATBNL010000000
VERSION     DATBNL010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176109"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VIC30_10220"
     CDS             complement(<1..544)
                     /locus_tag="VIC30_10220"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7804791.1"
                     /translation="MIKQNGHDLVVVGAGVIGLSVALAGLRRQWRVLVIERHEAAVGA
                     SIRNFGFVTVTGQKRGGHWRRAMRTRDLWLELADQAGIKIEHQGLTLVAKRPLAGDVL
                     YEFAQTEMGQDCSFLTKQQAQDKLPGLNSGTSFSEFLYSPHELRIESAKAIGQFAQWL
                     EQQGVAFRFSTSAFDLTGQGI"
     gene            complement(541..>2308)
                     /locus_tag="VIC30_10225"
     CDS             complement(541..>2308)
                     /locus_tag="VIC30_10225"
                     /inference="COORDINATES: protein motif:HMM:TIGR03262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033225 - ATPase-coupled
                     2-aminoethylphosphonate transporter activity [Evidence
                     IEA];
                     GO_process: GO:0033223 - 2-aminoethylphosphonate transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="putative 2-aminoethylphosphonate ABC transporter
                     permease subunit"
                     /protein_id="HEY7804792.1"
                     /translation="WLQSSDYVMNARPSERSREQITRIIPKSARQNVQMFTLQDNSPE
                     GGVLLVGGNLSEKGQRIEVAPDRLDRVQIRPVMSYSLGNFETYFSNPVLTQSIGNSVI
                     VALLVVLIVIPLAFVFAYGLTRTFMPMKSTFRLIATIPVLIPSLLPGIGLVYLFGEQG
                     ILKSWLMGESLYGPIGIVMASAFFTFPHALIIMVIALSTTDQRLYEAAQVLGASKWRT
                     FRMVTIPGARYGIVSAFFVVFTLVITDFGVPKVVGGDFNVLALDIYKQVVGQQNFQIG
                     AVVSLILLLPSVLAFTVDRINARKQVALMSAKAVPYQPQPDFLRDVSVTSVCVLVSIY
                     ILGILLMCQAAAVIKFWPYDLSISFRHFDFDRMDGGGWQSFYNSLFMAASAATIGGAL
                     IFLGAYLTEKMRSSSLMRSVLHMMAMIPMAVPGMVLGLAFIFFFNEPSNPLYFLYGTM
                     AILVINTISHLYTVPHISAMTALKQLDGEFESVSMSLKQPFWRSLTRVTVPVCAPAMG
                     EIWLYIFVNAMTTVSAVVFLYSPTTQLASVAVLNMDDAGDIAPAAAMGMMIFYSNVTA
                     RLIYYGIFARYFKRGQRWRTAS"
BASE COUNT          649 a          635 c          559 g          465 t
ORIGIN      
        1 taatgccttg cccggtgaga tcaaaagcac ttgtgctgaa acgaaatgca acaccctgct
       61 gctcgagcca ctgcgcaaac tgtccgatgg cctttgcgct ttcaatgcgc agctcatggg
      121 gtgaatacaa gaattcagaa aaagaggtgc cactgtttag acccgggagt ttgtcttggg
      181 cctgctgctt ggttaggaag ctgcagtctt gacccatctc agtctgggca aactcataca
      241 acacgtcgcc agccaatggg cgcttggcaa ccagtgtcag gccttggtgc tcaattttga
      301 tgcccgcttg gtctgcaagt tctaaccaga ggtcgcgtgt gcgcatggcg cggcgccagt
      361 gccctccgcg cttttgtccg gtaacagtga caaacccgaa gtttcgaatc gatgcaccaa
      421 cggcagcctc atgccgctca atgaccagca cacgccactg ccggcgcaag cccgctaaag
      481 cgactgacaa gccaatcaca ccagcgccga cgacgacgag gtcatgtcca ttctgtttta
      541 tcaagaggcg gttctccaac gctggcctcg tttgaaatag cgagcaaaga tgccgtaata
      601 aatcaaacgt gccgtgacat ttgaataaaa gatcatcata cccatggcag cggccggcgc
      661 gatatcccca gcatcgtcca tattcagcac cgccacggaa gccaactgcg ttgtgggtga
      721 atataaaaac accaccgctg aaacagtcgt catggcgttg acaaagatat acagccaaat
      781 ctcgcccatc gccggtgcac acaccggtac cgtaacccgt gtcaacgatc gccaaaaagg
      841 ttgttttaac gacatcgaga cagactcaaa ctcgccatca agttgtttta gtgccgtcat
      901 cgccgagatg tggggaactg tatataggtg gctgatggtg ttgatcacaa ggattgccat
      961 cgttccgtac aagaaataca gtggatttga cggctcatta aaaaagaaaa taaacgccag
     1021 acccagcacc ataccgggca cggccatcgg aatcatggcc atcatgtgca aaaccgatcg
     1081 catcaggctc gatgagcgca ttttctcggt cagataggcc ccaagaaata tcagtgcacc
     1141 cccgatggtg gctgccgacg ccgccataaa tagcgaattg tagaaagact gccatccacc
     1201 gccgtccatc cggtcaaagt cgaagtgcct aaacgaaatc gacaggtcat atggccaaaa
     1261 tttgatcacg gccgcagcct gacacatcaa caaaatgcca aggatataaa tcgacaccaa
     1321 gacacagaca gaggtaacgc tcacgtcccg tagaaagtcg ggttgcggtt ggtaaggaac
     1381 cgctttggca gacatcaacg ccacctgttt acgggcattg attcggtcca ctgtaaacgc
     1441 gagcaccgac gggagcaaca ggatcagaga gacgactgcg ccaatctgaa aattttgttg
     1501 tcctacgact tgtttataga tatcaagcgc gagcacgtta aagtcgccac ccacgacctt
     1561 cggcacaccg aaatctgtaa taaccaacgt aaacaccacg aaaaacgctg acacgatgcc
     1621 atagcgtgca cccggaatgg tcaccatccg gaacgtacgc cacttcgatg ccccgagcac
     1681 ttgcgcggct tcatacaaac gctgatcggt tgtcgaaagc gcgatcacca taataatgag
     1741 cgcatgggga aacgtaaaaa aagcactggc catgacaata ccaataggac catagaggga
     1801 ctcacccatg agccaggact ttaagatgcc ctgctcgcca aagaggtaca ccagaccgat
     1861 acccggcaac agcgacggta ttaaaaccgg aatcgtggca attagccgaa acgttgactt
     1921 catcggcatg aatgtgcgcg tcagtccata cgcaaacaca aatgccaaag gaatgacgat
     1981 caagacaaca agcaaagcga cgatgacaga gtttccgatg gactgggtca gcaccgggtt
     2041 ggagaagtac gtctcgaaat tacccagtga gtaactcatc actggacgaa tctgcacacg
     2101 gtccaatcga tccggtgcaa cttcgatacg ctggcctttt tcgctcaaat tcccaccaac
     2161 caacaataca ccgccttctg gcgaattgtc ctgaagggta aacatctgca cgttttgacg
     2221 cgcggatttt ggaatgattc gagtaatttg ttcgcgcgag cgctcactag gccttgcatt
     2281 catcacgtaa tcgcttgatt gcagccaa
//
LOCUS       DATBNL010000593         3066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_156770, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000593 DATBNL010000000
VERSION     DATBNL010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156770"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /locus_tag="VIC30_10230"
     CDS             complement(<1..1033)
                     /locus_tag="VIC30_10230"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003817453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEY7804793.1"
                     /translation="MKGVYEFLAQDRVIFGEPAAKAVVETANQYNANRVYVVASKTLN
                     RSTDEIQKIRQALGDRYLDTFDECIEHTPRASVIELARRLRTAKPDLVITVGGGTPVD
                     TVKIALLCLAQDIHDEKTLGQYRIEVDAQGQRHTPQVGKPPVRQVVIPTTLSAAEFTN
                     LGGCTDPLRQVKDLYTGREIGAMAVILDPAITQHTPDWLWLATGVRALDHAIETVCST
                     HHQPFTDATCLHGLAMLIRGLQKVRQDHDDLAARLDCQLGVWLSATGIMRVPMGASHG
                     IGHQLGAVAGVPHGHTSCVLLPAVMRYNESVNADRQALIAQALGSPGASAHALIGAVI
                     KSLGMPTTLQ"
     gene            1263..2147
                     /locus_tag="VIC30_10235"
     CDS             1263..2147
                     /locus_tag="VIC30_10235"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7804794.1"
                     /translation="MSAAKVHSAAYADRAALGVTLIVTAVFLFSIQDGIAKYLSMMYA
                     PLLIAWMRFLVQVLMLTVLYGPKLKLDLVRTRVPGWQFLRVICMVGANLTFLVGLRYI
                     PLGEATAIFFLSPIFVLLLSRWLLSERITTLQVSSIVMSLVGVLMIVRPGTALFAPAA
                     LLPLCSALFIAGYQMLTRKVMATDHAAASMFLVSLGACLLLTLALPFFWTMLPLVVWV
                     TVFVQGIFALVGHLLMANAYRFASAAVLAPFTYFQIVFSAIVGFFAFSHVPNWWAGIG
                     IGLVTAGGLMFVVRLRQQ"
     gene            2356..>3066
                     /locus_tag="VIC30_10240"
     CDS             2356..>3066
                     /locus_tag="VIC30_10240"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY7804795.1"
                     /translation="MNSTIQSYSMIINGELVESVTGQWIEVENPANKTVFARVPSGNK
                     ADVDIAVQAADRAFKTWSQVAAAERARLLHQIAGALEEKIELMAKTISQENGNALRTQ
                     SRGEARLTVDFVRYVAGLCREIKGNSVYLSSDNLDYTRREPFGVVGAIVPWNAPLLLA
                     ALKVAPAVMTGNTIVLKSSEEAPLAVHILMQTFNEFLPPGVVNLVTGTGLACGAPLVE
                     HPKVPKVSFTGSTAVGRSI"
BASE COUNT          614 a          761 c          912 g          779 t
ORIGIN      
        1 tttgtaaggt ggttggcatg ccgagtgact taatgactgc gccgatcagt gcatgggccg
       61 atgcgccggg tgagccaagg gcttgggcaa tgagtgcctg tcgatcagca ttgaccgact
      121 cgttatagcg catgacggcg ggcaacaaca cgcacgatgt gtggccatgt ggcacgccgg
      181 cgacagcacc aagctggtgg ccaatgccat gactggcgcc catcggaacg cgcatgatgc
      241 cagtggcgct gagccacacg ccaagctggc aatcgagtcg ggcagcgagg tcgtcatgat
      301 cttgtctgac tttttgtaga cctcgaatca gcatggccag accgtgcaag caagtggcat
      361 ccgtgaacgg ctgatgatgg gtcgagcaga cggtttcaat cgcgtgatcc aaggcacgaa
      421 cgcctgtggc gagccacaac caatcaggcg tatgttgggt gatggctgga tccagaatca
      481 ctgccatggc accgatttct cggccagtgt agagatcttt gacctgtcga agcgggtcgg
      541 tgcagccgcc taggttggtg aactcggcag ccgacagcgt ggtgggaatc acaacctgac
      601 gcaccggtgg cttgcccacc tgaggtgtgt gtcgttgccc ttgggcatcg acttcaatgc
      661 ggtattggcc tagtgtcttc tcatcatgga tgtcttgggc cagacacaac aaagcgatct
      721 tcaccgtgtc aacgggggtg ccgccgccca ccgtgattac cagatcaggc tttgcggtac
      781 gcaaccggcg ggcgagctca atcacactgg cgcgcggtgt gtgttcgatg cattcgtcaa
      841 aggtgtcgag gtagcgatct ccaagtgctt gccgaatttt ctggatctca tcagtcgatc
      901 gattcaacgt tttactggca accacataaa cccggttggc gttgtactgg ttggccgttt
      961 ctacaacagc cttagccgct ggttcgccga agatgacgcg gtcttgcgcc aaaaactcat
     1021 aaacaccttt catgttgctg cggacctcac taagaacgaa ttgacatggg tggggcgttg
     1081 ctttaccaat aggtgcaggt aacgtgagcg gcatgccaaa ctggattaac tggtttggag
     1141 ggtaacgctg cgttgtctgt cactgccccc gaatcatgat gatctgtttt gatattgtta
     1201 tgtaccgatt gacgctactg agccaacacc gatgaatgcc ttcaagccgg aacgaattag
     1261 caatgagcgc cgctaaggtg catagtgccg cttatgctga ccgtgcggca ctcggtgtaa
     1321 cccttatagt gacggcggtg tttctgtttt caattcagga tggtatcgcc aaatatctgt
     1381 caatgatgta cgcaccgctc ctaatcgcat ggatgcggtt tttggtgcag gtgttgatgc
     1441 taaccgtgct ttatggacct aagctcaaac tcgatctggt tcgaacccgt gtgcctggat
     1501 ggcagttttt gcgggtgatt tgtatggtag gggctaatct cacctttctg gttggcttgc
     1561 gctacatccc gcttggagaa gcgacagcga tttttttcct gtcccccatt tttgtgttgc
     1621 ttctgtcgcg ctggttactg tccgagcgca tcacgacctt gcaggtgagt tcgattgtga
     1681 tgagcttggt tggtgtgctc atgatcgtgc gaccgggcac ggcgcttttt gcgccagcgg
     1741 cgctgttacc tttgtgcagt gccttgttta tcgccggcta ccaaatgctc acgcgcaaag
     1801 tcatggccac cgatcatgcg gctgcgagca tgtttttggt gagtttgggc gcctgcctgt
     1861 tgctcacgct ggctttgccg tttttctgga cgatgctgcc gcttgtggtc tgggtcacgg
     1921 tgttcgtgca agggatcttt gcactagtgg gtcatttgtt gatggcaaac gcctatcgtt
     1981 ttgcgagcgc cgcggtgttg gcgccgttta cgtattttca gattgtgttc tccgcgatcg
     2041 ttggattttt cgcattttca catgtgccca attggtgggc cggcatcggt attggcttag
     2101 tgaccgctgg cggattgatg tttgtagtgc ggctcaggca gcaatagcgc tagggtagag
     2161 ctgaggtaga gctaagggga tggttgggct tgcaatagaa aaaagttatg gggtaagact
     2221 tatgttttat ttttctgata gttgtccgac cactatgctg ttgatgactt tggcgtctct
     2281 ttgctgcggc gacccctgaa cgtcagagat gcgcagccag tcagtttgac gcttaataca
     2341 cacgggagac caaccatgaa cagcacgatt cagtcctact caatgattat caatggcgaa
     2401 cttgtcgaaa gcgtcactgg tcaatggatc gaggtggaga accctgcaaa caaaaccgtg
     2461 ttcgcgcgcg tgccaagcgg caataaagcc gacgtcgata tagcggtgca ggccgctgac
     2521 agggcgttta aaacttggag ccaagtggcc gcggccgagc gcgctcgcct cttgcaccag
     2581 atcgctggcg cactggaaga aaaaatcgaa ctcatggcca agaccattag ccaggaaaac
     2641 ggcaacgcgc tgcgcacgca aagccggggc gaggcgcggt tgacagttga ttttgtgcgc
     2701 tatgttgctg gcttgtgccg cgagatcaag ggcaattcgg tctacctgtc gtcagacaac
     2761 ttagattaca cccgacgcga accatttggc gtggtgggtg ccattgttcc ctggaatgcg
     2821 cccttgctgc tggcggcttt gaaggtggca ccggcggtga tgacgggcaa taccattgtg
     2881 ttgaaatcgt ctgaggaagc accgcttgct gttcacattc tcatgcagac gtttaatgag
     2941 tttttgccgc ctggcgtggt caacctcgtg accggtacag gtcttgcctg tggtgcgcca
     3001 ctggtggagc atccgaaagt ccctaaagtg tcgtttacgg gatcaacagc cgtggggcgt
     3061 tcgatt
//
LOCUS       DATBNL010000594         2566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_67063, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000594 DATBNL010000000
VERSION     DATBNL010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67063"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VIC30_10245"
     CDS             <1..885
                     /locus_tag="VIC30_10245"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7804796.1"
                     /translation="LGLTPLNVAEQLQFQLDGVPVTNVRRDIRQVQVRARALPESGNL
                     LQNIEIRTPDGRKVPLSQLGAAQVEFEEPVIKRYNREPALYINADVQGAQPPDATMAV
                     WRALEPLRADLPSGYQLSIGGSIEQSEKADASIQKLQPLMVGLMLIFIMLQMRSFSGM
                     FMVVATAPLGLIGAVLALLLFGQPFGFVALLGLIGLAGILMRNTLILTQQVSDNVSEG
                     MVLGTAVIEAAVQRARPVVLTAIAAALAFIPLTFDSFWGPLAYVLIGGVVVGTVITIL
                     FVPALYAWWFRIDGAKTT"
     gene            946..1404
                     /locus_tag="VIC30_10250"
     CDS             946..1404
                     /locus_tag="VIC30_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804797.1"
                     /translation="MDPFKKLPGYRKAPAGLERKILRLIPRVFVLGTILMLLPSALAR
                     LWTMNDAAWVASKFISTVDIYAIGLLTVLWTGLFTVGVGAFTVMVMKGPAYVADAYPL
                     PDADKPRAVGLSRCGGDSDDRNDDNDHSEHATRYAKGTNIKPLESDKTDS"
     gene            1401..1838
                     /locus_tag="VIC30_10255"
     CDS             1401..1838
                     /locus_tag="VIC30_10255"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013521162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY7804798.1"
                     /translation="MSQLRSDITLDILRERLGQSDNLPRHLGIELTKLEPLALHGRMP
                     LQDRHFAPNTYLHAGSVVTLADTVAGFATYAHLPEGAVSFTTIELKSNFLGTAREGAI
                     ACRAWAQHLGRNTHVWDAEVYAEATNKKIALFRCTQMVLWPKA"
     gene            1910..>2566
                     /locus_tag="VIC30_10260"
     CDS             1910..>2566
                     /locus_tag="VIC30_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011298111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEY7804799.1"
                     /translation="MTQPVRIDFVSDVACPWCAIGYTTLETALSTLNTPVEVHLQPFE
                     LNPDMPKGGQDAMEYLAAKFGITPDEVRINQQRIYDRAAQVGFRFHPDGRKRVYNTFN
                     CHRLIHWATQEHGLDGAWALKRTLLAAYFTRADDMDDAQTLLDAVQQAGLDVKRAAKV
                     LADGEFEHEVRAAQTRYKMLGIQGVPAFILNDKFLVEGAQPVENLVSAIEAAAKRAAD
                     D"
BASE COUNT          585 a          709 c          678 g          594 t
ORIGIN      
        1 ttgggactga ccccgttgaa tgtggccgag cagctgcaat ttcaactcga tggcgtgccc
       61 gtgaccaacg ttcgccgcga cattcggcaa gtgcaggtgc gagcgcgggc actacctgaa
      121 tcaggcaact tgctacaaaa catcgagatt cggacccctg atgggcgcaa agtccccctg
      181 tcacagctcg gtgcagcaca agtagagttt gaagaaccgg tcatcaaacg ctacaaccgc
      241 gaacctgcgc tttacattaa tgccgatgtt cagggtgctc aaccgcctga tgccaccatg
      301 gctgtgtggc gggcacttga acccttgcgt gctgacttac cttcaggcta tcaactgagc
      361 atcggtggct cgattgaaca gtctgagaaa gccgatgcct cgattcagaa actgcagccc
      421 ctgatggttg ggctgatgct gatttttatc atgctgcaaa tgcgtagttt ctcaggcatg
      481 tttatggttg tggccacggc cccgcttggg ctcatcggtg ccgtactggc gttgttgcta
      541 ttcggtcagc cgtttggttt tgtggctttg ctaggactca taggactggc tggcattctt
      601 atgcgcaaca ccctcatctt gacccaacaa gtcagcgaca acgtctccga gggtatggtg
      661 ttaggcactg cggtcattga ggctgccgtg caacgggctc gacctgtggt gttaacggcc
      721 attgcagcgg cgctggcatt tattccactg acctttgaca gcttctgggg gcctttggct
      781 tatgtattga tcggtggtgt tgttgtgggc accgtgatta cgatattgtt tgtacccgct
      841 ctgtatgcct ggtggtttcg catcgatggt gccaagacga catgaactca ggcacaatca
      901 caacataaac acttgaacca actaggtgct cctgtttgag tcaacatgga tccttttaaa
      961 aaactacctg gctatcgcaa agcccctgca ggtctggaac gcaaaatctt gcgtttaata
     1021 ccgcgggtgt ttgtgctagg cacgatactg atgttgttgc cgtcggccct tgcccgcctt
     1081 tggaccatga acgatgcagc ctgggtggct agcaagttca tcagcacggt tgatatttac
     1141 gccatcggct tactcaccgt gttgtggaca ggcctgttca cggtgggcgt cggtgccttt
     1201 accgtcatgg tcatgaaagg cccggcctat gtcgcagatg cttacccatt acctgacgct
     1261 gacaagccaa gagccgttgg tctatcgcgc tgtggtggtg acagtgacga ccgcaatgat
     1321 gacaatgacc acagtgagca cgccacgcgt tacgctaagg gaaccaatat aaaacccctt
     1381 gagagtgaca aaactgactc atgagccaac ttagaagtga catcacactg gacatcttgc
     1441 gcgagcgtct cggacaaagt gacaatctac cgcgtcatct cggtattgaa ctgaccaaac
     1501 tcgaaccctt ggccttgcac ggtcgtatgc cattgcaaga ccggcatttc gcgcccaaca
     1561 cctatctgca cgccggcagc gtggtgacgt tggccgatac cgttgccggg tttgcgacct
     1621 atgcgcacct acctgaaggt gcagtgtcgt tcaccaccat tgagctcaaa tccaattttc
     1681 ttggcaccgc tcgcgaaggt gcgatcgcgt gccgtgcctg ggcacaacac ttgggacgca
     1741 atacccacgt ctgggatgcc gaggtgtatg ccgaggcaac caataaaaaa atcgccttgt
     1801 ttcgctgcac acaaatggtg ctgtggccca aagcgtagcc acccacatca caaacaccac
     1861 caacataacc aacatagcca cggtacgtac tcaaccacag gagcccgaca tgacacaacc
     1921 tgttcgcatc gattttgttt ctgatgtcgc gtgcccgtgg tgcgccattg ggtacaccac
     1981 actagagacg gcgttaagca ccctaaacac ccctgttgaa gtccacttgc aaccgtttga
     2041 gctaaatccg gacatgccaa aaggtggtca ggatgcaatg gaatatctcg cagccaaatt
     2101 cggcattaca ccggatgagg tgcgaatcaa tcagcaacgc atctatgacc gtgccgctca
     2161 agtcggattc cggtttcacc cggatgggcg caaacgtgtc tacaacacgt ttaactgtca
     2221 tcgactgatt cattgggcca cgcaagaaca tggcttggac ggcgcctggg cactgaaacg
     2281 cacactgctg gccgcttatt tcactcgcgc cgatgacatg gacgatgcgc agacgctttt
     2341 ggacgctgtg caacaggctg ggcttgatgt caaacgcgca gccaaagtgc tcgccgacgg
     2401 tgagtttgaa cacgaggtgc gtgcagccca aacccgctac aaaatgctcg gcattcaggg
     2461 ggtacccgct ttcatcctaa acgacaagtt tctggtcgaa ggcgcgcaac cggttgaaaa
     2521 tcttgtttca gccattgaag cggcagccaa acgtgctgcc gacgat
//
LOCUS       DATBNL010000595         1917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_56910, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000595 DATBNL010000000
VERSION     DATBNL010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56910"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..303
                     /gene="rpsQ"
                     /locus_tag="VIC30_10265"
     CDS             25..303
                     /gene="rpsQ"
                     /locus_tag="VIC30_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY7804800.1"
                     /translation="MTEAQTTPVKRQRTLVGKIVSDKMDKTVVVMVERRVKHPLLGKV
                     VMRSAKYKAHDEGNEFKTGDTVEIAESRPISRDKSWRVMRLVEAARII"
     gene            complement(440..1867)
                     /locus_tag="VIC30_10270"
     CDS             complement(440..1867)
                     /locus_tag="VIC30_10270"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003806915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY7804801.1"
                     /translation="MYQPLSLYINGQFIEAEGRKTQDVINPANRELLGQLPHATDADL
                     EQALQAADKAFQSWRKTSPIERAAILRKVGQLTRDRAPEVARNMTLDMGKPLAEAMGE
                     LMSCSDHCDWHAEECRRIYGRVIPPRNPNVRQLVLREPIGVCVAFTPWNFPYNQAIRK
                     ITAAIGAGCTIVLKGPEDAPSAVMAIAQMFHDAGLPPGVLNIVWGDPPKVSDYLIKSP
                     ITRKVSFTGSIPVGKHLAALAGQHMKRVTMELGGHSPVIVFDDADIEKAAKMLAKFKI
                     RNAGQVCVSPTRFYVQKGAYDKFLDTFTEVMSKTKVGDGLTEGVEMGPLAHERRMPVM
                     AQFIEDAVSRGGKVLIGGEPGAGDGFFFQPTVITGLPDDSMLMTQEPFGPVAPVVAFD
                     DPEEVIRKANSLPFGLSSYVFTNSLQTATKASNAIEAGMVNINHFGSALPETPFGGIK
                     ESGIGSEGGSETFDGYLVTKFVTHI"
BASE COUNT          445 a          491 c          505 g          476 t
ORIGIN      
        1 actcagaaag ctggagcctg ataaatgact gaagctcaaa ctaccccggt aaagcgccag
       61 cgtacgctgg tcgggaaaat cgttagcgac aagatggaca agaccgttgt tgtgatggtc
      121 gagcgtcgcg tgaagcaccc acttcttggc aaagttgtta tgcgctcagc caaatacaaa
      181 gcgcacgatg aaggcaacga gtttaagact ggtgacacgg ttgagatcgc tgagtcccgc
      241 cctatttctc gtgacaagtc ctggcgtgtg atgcgtctgg tcgaggcagc acgcatcatt
      301 taattggttg cagcgtctag cggtatagat gctctgattc gatttcatga acgatcgctg
      361 aatgaaaaaa gcgacaccag tatggtgtcg cttttttttc tgctgctttc cttgcaaata
      421 ggcaagccag tgaccttgct tatatatgcg tgacaaattt ggttacgaga tagccgtcaa
      481 aggtttcgct tccgccctca ctgccaatgc cactttcctt gataccgcca aaaggtgtct
      541 caggtaaggc actgccgaaa tgattgatgt tgaccatccc cgcttcgatt gcatttgaag
      601 cttttgttgc cgtttgcaaa gagttggtga agacataaga cgacagacca aacggtaagc
      661 tgttggcttt acgaatgact tcttccgggt cgtcaaaggc tactactgga gcgactggcc
      721 caaacggctc ctgcgtcatg agcattgaat catccggcag gccagtaatg accgtgggct
      781 ggaaaaagaa tccgtctcca gctccgggtt caccgccgat aagcactttg ccaccccggc
      841 tcacggcatc ttctatgaac tgagccatca ccggcattcg tcgttcgtgt gcgagcggcc
      901 ccatttcgac gccttcggtc aatccgtctc caacttttgt cttactcatg acttcagtga
      961 atgtgtcgag gaatttatcg tatgcgcctt tttgtacata aaagcgcgtc ggcgagacac
     1021 acacttgtcc agcattgcgg attttgaatt tggcaagcat cttagctgcc ttctcaatgt
     1081 cggcatcatc aaaaacgatc accggtgagt ggccaccaag ttccatggtc acacgtttca
     1141 tgtgttgacc ggccaaagcc gccaagtgtt tgccaaccgg aatcgagccg gtaaacgaga
     1201 ctttgcgcgt gatgggcgac ttaatcaggt agtcggagac cttgggtgga tcgccccaga
     1261 ctatattgag tacgccgggt ggtaagcctg catcatgaaa catctgggcg atggccataa
     1321 cggcactagg cgcatcttcc ggacctttca aaacgatcgt gcaaccggca ccaatcgcgg
     1381 cagtgatctt acgaatcgct tggttgtaag ggaagttcca tggggtgaag gccacacaca
     1441 cgccaatggg ttcacgcaat acaagttggc gtacgtttgg attgcgaggc gggataaccc
     1501 gtccataaat acgccgacat tcctcagcgt gccagtcgca gtgatccgag caagacataa
     1561 gctcgcccat cgcttctgca agcggtttgc ccatgtcaag tgtcatgttg cgcgctactt
     1621 caggggcgcg atcacgcgtc agttgcccaa cttttcgcag tatggctgct cgctcaattg
     1681 gggaggtttt acgccacgac tggaacgctt tgtccgcggc ttgcagcgct tgttctaaat
     1741 cagcatcagt ggcgtgcggc agctggccga gtagctcccg gtttgcggga ttaataacgt
     1801 cctgggtttt acgaccttcg gcctcgataa attgaccgtt gatataaagc gagagtggct
     1861 gatacatgtt tgtcccattg atctgttgtg gtcggcgaaa cggctaatgc tacaacc
//
LOCUS       DATBNL010000596         1773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_136798, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000596 DATBNL010000000
VERSION     DATBNL010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136798"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VIC30_10275"
     CDS             <1..780
                     /locus_tag="VIC30_10275"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY7804802.1"
                     /translation="LQGHVAKLAENMMRDPVRIQISAPKERHAQIDQHVFYADSAEHK
                     MRLLDHMLRDAKLDQAVVFTATKRGADALADSLSAQGFHAQALHGDMNQRQRTRTLAE
                     MQRGRIKILVATDVAARGIDVQTISHAINFDMPMQAEDYVHRIGRTGRAGRQGTAITL
                     CEHRDRFKVRRIEQYIGHGIATTEIAGLEPKRVATKKPHVKNAKPRRPAFGAKPAGSS
                     PKPGFGSKPAGAKPYTGGHAKPTRPTTRSRTDSSDRRRARA"
     gene            710..>1773
                     /locus_tag="VIC30_10280"
     CDS             710..>1773
                     /locus_tag="VIC30_10280"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004566001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY7804803.1"
                     /translation="MQNPRAPRPDPAQIHLTADALAHNESVTTHLREHIAQRGGWMPF
                     VQFMHEALYAPGLGYYAAGLAKLATRDTLDHPGSAAGDFVTAPELSPAFGFTLAQQVA
                     QVLKNHPNSDPNPNPNYTPTIIEFGAGSGQLAHDVLTALSGLDCHPTYCILEVSADLR
                     QRQQSRLAQWQSQVKWLDDLPTDFEGVVLANEVLDAMPVHLVGWGADGSVFERGVVWQ
                     DDHFAWQDQPASDVVASALRAKMPPLPGYVTEINLAAQAWVGQITNWLKWGAAFLIDY
                     GFTEREYYHPQRSSGTLMCHIQHRSHANPLILPGLQDITAHVDFTAMAHAAHDAGLDV
                     MGYTSQARFLLNAGLLDLLPT"
BASE COUNT          388 a          556 c          462 g          367 t
ORIGIN      
        1 ttgcaaggcc acgtggccaa gctcgccgag aacatgatgc gtgacccggt tcgcatccag
       61 atctctgcac ccaaagagcg tcatgcccag atcgatcagc acgttttcta tgccgatagc
      121 gctgagcaca agatgcgttt gctcgatcac atgctgcgtg acgccaagct cgaccaagcc
      181 gtggtgttta ccgccaccaa acgcggtgcc gatgctctgg ctgatagctt gagtgctcaa
      241 gggtttcatg cgcaagcctt gcacggtgac atgaaccagc gtcaacgcac ccgcaccttg
      301 gctgaaatgc agcgtggtcg tatcaagatc ttggtcgcca ccgacgttgc cgcacgcggt
      361 attgatgtgc aaaccatcag ccacgccatt aactttgaca tgcccatgca ggccgaagac
      421 tacgtgcacc gtattggccg tactggtcgt gctggtcgtc aaggtaccgc tatcacactg
      481 tgcgagcatc gtgaccgttt taaggttcgt cgcatcgagc aatacattgg tcatggcatt
      541 gccacgactg agatcgctgg tcttgagccc aagcgtgttg ccactaagaa gccacacgtt
      601 aaaaacgcca agccacgtcg tccggccttt ggtgccaagc cagctggtag cagccccaaa
      661 ccagggtttg gtagcaaacc tgctggcgct aaaccgtata ctggcgggca tgcaaaaccc
      721 acgcgcccca cgacccgatc ccgcacagat tcatctgacc gcagacgcgc tcgcgcataa
      781 cgagagcgtt acaacccact tgcgcgaaca catcgcgcaa cgtgggggct ggatgccctt
      841 tgtccagttc atgcacgaag cactctatgc gccaggcctt ggctactacg ccgccggtct
      901 ggccaagctt gctacccgag acacgttaga tcatcccggg tcagcagccg gtgactttgt
      961 cacggcacct gaactgtccc ccgcatttgg tttcacactg gcgcaacaag tcgcgcaagt
     1021 cctaaagaac caccccaact ccgacccaaa ccccaacccg aactacacac ccaccatcat
     1081 cgagttcggt gctggctcag gtcaactcgc ccacgatgtg ctcacagcac tgtccggtct
     1141 ggactgccac cccacttact gcattcttga agtctctgcc gatctgcgcc aacgccagca
     1201 atcacgccta gcacaatggc aatctcaggt taaatggcta gatgacttgc ccacagactt
     1261 tgaaggcgtg gtgctggcca atgaagtgct tgatgccatg ccagtgcatc tcgtgggctg
     1321 gggtgctgat ggatcggtat ttgagcgtgg cgtggtctgg caagacgacc acttcgcctg
     1381 gcaagaccaa ccagccagtg atgtcgtggc aagcgctctg cgcgccaaga tgccgccact
     1441 gccaggctat gtcacggaaa tcaatctggc tgcccaagcc tgggtcggac agattaccaa
     1501 ttggctcaag tggggtgcgg cgtttctcat tgactatggg tttactgagc gcgagtacta
     1561 ccacccgcag cgcagcagcg gcaccttgat gtgtcacatt caacaccgca gtcacgctaa
     1621 tccgctgatc ctaccgggct tacaggacat cacggcgcat gttgatttca ccgccatggc
     1681 gcacgccgcc cacgacgctg gccttgatgt catgggttac accagtcagg cgcgattctt
     1741 actaaatgcc ggtctacttg atttgctgcc cac
//
LOCUS       DATBNL010000597         4676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_146919, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000597 DATBNL010000000
VERSION     DATBNL010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4676
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146919"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VIC30_10285"
     CDS             complement(<1..316)
                     /locus_tag="VIC30_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEY7804804.1"
                     /translation="MSYLVLARKWRPRDFESLVGQDHVVRALTHALSTGRLHHAWLFT
                     GTRGVGKTTLSRILAKSLNCETGITATPCGQCRACTEIDGGRFVDYVELDAASNRGVD
                     EMT"
     gene            complement(340..437)
                     /gene="ffs"
                     /locus_tag="VIC30_10290"
     ncRNA           complement(340..437)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VIC30_10290"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(464..3835)
                     /locus_tag="VIC30_10295"
     CDS             complement(464..3835)
                     /locus_tag="VIC30_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY7804805.1"
                     /translation="MSERQPPDSQARAAAIDPERSFIVQAPAGSGKTSLLTDRILALL
                     ARVQEPEQVVAMTFTRKAAAEMHARVMDKLARATSPEPPSEAHEYQGWVLARAALAQD
                     EQRGWGLLSHPARLRIQTIDSFCASLVRAMPWLTGLGGMPNIVDDAPALYTEAARRTV
                     ASADVFPDVRELLVHMDVGVADVVQALTDMLGKRDQWLPLLNQADDAQQLQAFLQETL
                     VEELQWLVQAMPPGWQHMLAEPASQAAQAIIDEGQVDSPIAALLDWQAGDLQPDPDDL
                     PRWWGLAALLLTTTGSLRKKLTKTSGCPPGSPQKAALSEWLDSMAVGEETPLWVSRLA
                     AIGHMPEANLSPDQLAVLKAQLASLRLAAANLMVVFAERGEVDFIEVAQRAVQALGHT
                     DEPSELLLKLDNRISHLLVDEFQDTSQTQIELLELLTAGWQPDDGRTLFLVGDPMQSI
                     YRFRKAEVSLFLQVQGEGLGEITLEPLTLTANFRSQAGVVNWVNQTFGPMFPQVSQPT
                     FGAIRYEPADAWHDETPGVEAVSWHVHLSNDQAWAQVVNIAQRAWQDHAESDKPMAIL
                     VRSRSHLGEVARQLADAGLPCRAIELDSLSSREVVVDLLQLTRAIVHPGDRAAWLAVL
                     RAPWCGLTLGTLKLLFGQPGSQSGTTSATTSDRAICDVLAQCLAKPEKPEGIDADQWA
                     RLLGVAAVLLDAVRDDQALPLMARIEAAWRALEGHRLVRSSADLQDVASFFGLAERVA
                     GHSHLDVDEFERHLAKLYAEPQASGRAIEVMTMHKAKGLEFEVVVLLGLERQAKSDSA
                     PLVRIEQQSGRVLFGPLKARVQEEQDPLSRYLGKREEMRQRYEVDRLLYVAATRARTE
                     LHLVATRPINVKTGDWAEPNSSSLLSRLWPHRPAIPTPDPETGGQEDKGPQPWWVAPA
                     QLRRERPIDQRPRPKTSARDGSDRFSWPMAESAERISGILIHAWLARFALQSNHQSKN
                     QSNHQTDQPTSLSVPPLPALERQLRALGLPQALRPAAALEVSAALDAMLQSPHGQWLL
                     KQPLRQVEWALIDVRQTVSIMDLAIDLPDGWLVVDYKTSRPGASEDPQMFEARMRSRY
                     GTQMQRYREQLQALDGRSARSVLYFPRDDIWLEVA"
     gene            complement(3828..>4676)
                     /locus_tag="VIC30_10300"
     CDS             complement(3828..>4676)
                     /locus_tag="VIC30_10300"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEY7804806.1"
                     /translation="VSVLQTQAANPLWAFFQYRLKARGLPAYAQWPSTQDRGNLLHRV
                     MELLWNQWGNQARMLHAIRAPDWASELEQLVAKVASEKLAQWPPALRELEQQRALEVL
                     DQWLAFEASRESFAVIEREGKHDFLDGALRLGVTIDRIDELADGQRIVFDYKSGVSLP
                     RPDKDWQSMSFRHPQLLVYACVLHDQGKEPDALGWVRLHASGVTIEGVSATDTNVPGV
                     KPWAELKWPELDWSAQMAHWQTRVRSLAQQFAQGRHENITWQRDDLKYCTIKPLLRLH
                     VEMDDE"
BASE COUNT         1005 a         1443 c         1276 g          952 t
ORIGIN      
        1 gagtcatctc atcgacgccg cgattcgaag cggcatcaag ctcaacgtaa tccacaaacc
       61 gcccgccatc gatttcggtg caggctcggc actgcccgca cggtgtggcg gtgataccgg
      121 tttcacagtt aagcgatttg gccagaatgc gtgataacgt ggtcttacca acaccgcgtg
      181 tgccggtaaa gagccaggca tgatgcaagc ggcccgttga caaggcgtgc gtgagcgccc
      241 ggaccacatg atcctgtccg acgagactct caaaatcgcg tggccgccat ttgcgggcca
      301 gaaccaaata actcatgtga ccttaagcca ttgatgcaag gaggcgagcc ttactccggc
      361 actgactcgg cacggctgtg gctgcttcgt tcccgacctg accaggttca ccgctgggtc
      421 atgcgaaggg gcccgcccaa ttgaattcta gcaggctgtg cgctcatgcc acttcaagcc
      481 agatatcatc acgcggaaag tacagcaccg agcgcgcgct gcgtccatca agtgcttgta
      541 attgctcacg ataacgttgc atttgggtgc cgtagcggga tcgcatacgc gcctcaaaca
      601 tttgagggtc ttcactggca ccgggcctag aggtcttgta gtccaccact aaccagccgt
      661 cgggcaagtc aatcgccaaa tccatgattg ataccgtctg gcggacatca atcagggccc
      721 actccacttg tcgcaggggc tgcttcaata gccactgccc gtgcggactc tggagcatgg
      781 catcaagcgc agctgacacc tcaagcgcgg ccgcaggtct taacgcctgt ggcagtccta
      841 gcgcacgcaa ttgccgctcc aaggctggca aaggtggcac tgacaaggat gttggttgat
      901 cggtttggtg gttggattgg ttctttgact ggtggttgga ttgcagagca aatctcgcca
      961 accaagcatg tatcaaaatc ccgctaatgc gctcagccga ttcagccatg ggccagctaa
     1021 aacgatccga gccatcacga gcactggtct tgggccgcgg gcgttgatca atcgggcgct
     1081 cgcggcgtaa ctgtgcaggt gcaacccacc agggttgcgg acctttatct tcctggccgc
     1141 cggtctccgg atccggcgtc ggtatggccg ggcgatgcgg ccagagtcta gacagcaggc
     1201 tgctgctatt gggctcagcc cagtcaccgg ttttaacgtt gatgggacgg gttgccacca
     1261 ggtgcaactc agtgcgcgcg cgggtggctg ccacatagag caggcgatcg acctcgtagc
     1321 gctggcgcat ctcttctcgt ttaccgaggt aacgtgacag cggatcctgc tcttcttgca
     1381 cccgagcctt aagcggacca aacaacaccc gcccgctttg ctgctcgata cgcaccaacg
     1441 gtgccgaatc cgacttagcc tgacgctcta ggcccaacaa caccaccacc tcaaactcca
     1501 ggcccttggc tttgtgcatg gtcatgactt caatggcacg accagaggcc tgcggctcag
     1561 cataaagctt agccaagtgg cgttcaaatt catctacgtc caagtgactg tggcctgcca
     1621 cccgctcggc caacccaaaa aacgacgcca catcctgtag gtctgcagac gagcgcacca
     1681 aacgatgacc ttcaagtgcg cgccaggccg cttcgatgcg cgccatcagc ggtaacgctt
     1741 gatcatcacg caccgcatca agcaacacgg cagccactcc caagagtcgt gcccattggt
     1801 cggcatcaat gccctcaggc ttttctggtt tggccagaca ctgcgccagc acatcacaga
     1861 tggcccggtc gcttgtagtg gcacttgtag tgccactctg actgcctggc tgcccaaaca
     1921 gcagcttcaa ggtgcccaag gtcaaaccgc accacggcgc acgcaacacc gctagccatg
     1981 cggctcggtc acccgggtgc acaatggctc tggtcaattg cagcaaatca accaccacct
     2041 cgcgcgagct caagctgtct agttcaatgg cacgacaagg caaacccgca tcagccaatt
     2101 ggcgtgcgac ctcgcccaag tgcgagcgcg aacgcacaag aatcgccatg ggtttatccg
     2161 attcggcgtg gtcttgccag gcgcgctgag caatgttgac cacctgcgcc caggcttgat
     2221 cattcgatag atgcacatgc cagctgacag cctcaacgcc gggtgtttcg tcatgccagg
     2281 catcggctgg ttcgtagcga atggcgccaa acgtgggttg gctcacctgc gggaacatgg
     2341 gaccaaaggt ctggttaacc caattgacca caccggcttg cgagcggaaa ttggctgtca
     2401 gggtcagagg ctcaagcgta atctcgccca agccctctcc ttgcacttgc agaaacagac
     2461 tcacctcggc cttgcgaaac cggtaaatcg actgcatggg gtcgcccacc agaaacaagg
     2521 tgcgaccatc gtcaggttgc cagccagcgg tgagcaactc caacaattcg atttgtgtct
     2581 gactggtatc ttgaaactca tcgaccagca agtgcgagat tcgattgtcg agcttaagca
     2641 atagctcact cggttcatct gtgtgcccaa gcgcttgcac cgcgcgctgt gccacctcga
     2701 taaagtcaac ctcgccacgt tcggcaaaca ccaccatcag gttagctgct gctaggcgca
     2761 gactggccag ctgcgctttt aggacagcaa gctgatcagg cgataggttc gcttcgggca
     2821 tgtggccaat ggcagccaat cgagacaccc acaacggggt ttcttcaccc acggccatcg
     2881 agtcaagcca ctcgctaaga gcggcttttt gtggcgagcc tggtgggcag ccagaggtct
     2941 tagtgagttt ctttctcaag ctgccagtgg ttgtcagtaa tagcgcagca aggccccacc
     3001 aacgtggcaa atcatcagga tcgggctgca aatcgccggc ttgccaatca agtaatgcgg
     3061 caatcggcga atcaacctga ccctcatcga tgatcgcttg ggcggcctgg cttgctggtt
     3121 cggccagcat gtgttgccag ccgggcggca tggcttggac aagccattga agctcttcga
     3181 ccaacgtctc ctgcaaaaac gcctgcagct gttgggcatc atcggcttgg tttaataacg
     3241 gcaaccactg gtctcgcttg ccaagcatgt cagttaatgc ctgaaccaca tcggccacgc
     3301 ccacgtccat gtgcaccagc agttcgcgta catccggaaa cacgtcagcc gatgctaccg
     3361 tgcgtcttgc cgcttcggtg tagagcgccg gtgcatcgtc gacaatgttg ggcatgccac
     3421 ccaacccggt taaccagggc atggcgcgca ccaatgacgc acaaaacgag tctatggtct
     3481 gaatgcgcag gcgcgccggg tggctcaata gcccccaccc tctttgttcg tcttgggcta
     3541 gcgcggcgcg cgcaagcacc caaccctggt attcatgcgc ctctgacggt ggctcgggcg
     3601 acgttgcgcg tgcgagcttg tccatcacac gggcatgcat ctcagccgcg gccttgcgtg
     3661 taaacgtcat cgccacgact tgctcgggct cttggacacg ggctagcaac gccagaatgc
     3721 gatcggttag caaggatgtc ttgcctgaac cggccggggc ttgcacgatg aaggagcgct
     3781 caggatcaat ggcagctgct cgcgcctgac tgtcgggcgg ttgacgctca ctcatcatcc
     3841 atctccacat gcaagcgtag caggggttta atcgtgcagt atttcaaatc gtcacgttgc
     3901 cacgtgatgt tctcgtgtcg gccttgagca aactgttgcg ccaagctgcg cactcgcgtt
     3961 tgccaatgcg ccatctgggc ggaccaatca agctcaggcc atttcaattc cgcccagggt
     4021 tttacacccg gcacattcgt atccgtggca gaaacccctt cgatcgtcac gccagaggca
     4081 tgcagccgaa cccagcccaa ggcatcgggc tctttgccct gatcgtgcaa gacgcaggcg
     4141 tagaccagca actgcgggtg tctaaatgac atcgactgcc agtccttgtc tgggcgaggc
     4201 agcgacacac cacttttata gtcaaagaca atgcgctggc catcggcaag ctcgtcgatg
     4261 cgatcgatgg tcacacctag cctcaaagcc ccatccagaa agtcatgctt gccttcacgt
     4321 tcgatgaccg caaatgactc gcgactggct tcaaatgcca accattgatc gagcacctca
     4381 agcgcgcgtt gttgctcaag ttcacgcaag gcaggtggcc attgcgcaag cttctcagat
     4441 gccaccttgg ccaccaattg ttcaagctcg cttgcccaat cgggcgcgcg gatcgcatga
     4501 agcatgcgcg cctgattgcc ccattgattc cacaacaact ccattactcg gtgcaacaga
     4561 ttgccccgat cttgcgtgct gggccactgc gcgtaggccg gcagccctct ggctttcaat
     4621 cggtactgga aaaatgccca caaaggattg gctgcctgcg tctgcaagac cgacac
//
LOCUS       DATBNL010000598         1975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_37039, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000598 DATBNL010000000
VERSION     DATBNL010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37039"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..1012)
                     /gene="cysQ"
                     /locus_tag="VIC30_10305"
     CDS             complement(125..1012)
                     /gene="cysQ"
                     /locus_tag="VIC30_10305"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEY7804807.1"
                     /translation="MKSTQLRGGDRQDLLEMLDWLLPMAVRAGQAIMAVYETANTHPE
                     GRASALVQHKADDSPLTQADLAAHETIAAGVTKHAPDIVLISEESYVPEQMARAVEQG
                     KRFWLVDPLDGTKEFLSGTGEFTVNIALIENGQSVLGVVYQPTTDELFWGGKALGAWR
                     RVGNTSSRVSDGAQPLAVTPMSAPPWRVLASRSHLGPQTQELIGRMGQTTLLQAGSSL
                     KFCRIAMGEADFYPRLGFTSQWDTAAAQAVLEGAGGYVMDLDGKPLRYGQAEVINPHF
                     LASALPYEQVGQWWFATRQ"
     gene            complement(1288..>1975)
                     /locus_tag="VIC30_10310"
     CDS             complement(1288..>1975)
                     /locus_tag="VIC30_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006225134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY7804808.1"
                     /translation="DQYSHILFPATVSGKNVAPRVAAKLDVAQVSDITAVVSPDTFER
                     PIYAGNAIATVQSADARKVLTVRTTAFDAGAAEGGSAAVETLTAVSDSGKSSFVGREL
                     AASDRPELAGAGVVVSGGRGMGSAENFKVLEPLADKLGAALGASRAAVDAGFAPNDWQ
                     VGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFGVSDYGLVADLF
                     EAVPELEKGL"
BASE COUNT          452 a          615 c          472 g          436 t
ORIGIN      
        1 tcgaagaaca cgccatgtcc gtgccgtttg aaatatagaa tactgcacaa tgagtccaaa
       61 tagagcaggc gctagccagc gacaacgcgt gtttgtcgac accaatgcaa tcaacttcgg
      121 cgcgctactg acgcgtcgca aaccaccact gcccaacctg ctcatacggc agtgctgacg
      181 ccaaaaaatg cgggttaatg acctcagcct gcccatagcg caaaggcttg ccatctagat
      241 ccatcacata accaccagca ccttcgagca cagcctgcgc ggcagccgta tcccattgac
      301 tcgtgaatcc caagcgcgga tagaaatcag cctcacccat ggctatccga caaaacttca
      361 gcgaactgcc tgcttgcagt agcgtggtct gacccatgcg accaatgagt tcttgggtct
      421 gaggtcctaa gtggctacga ctggccaaga ctcgccacgg tggcgcactc atcggagtaa
      481 cggccaacgg ttgagcacca tcagacacac ggctactcgt attaccaact cgacgccacg
      541 cccccaacgc cttgccaccc caaaaaagct catcggtggt gggctgatac accacgccta
      601 gtaccgattg accgttctcg attaaagcaa tgttgaccgt gaactcgcct gtgcccgaca
      661 aaaactcttt ggtgccatct aaagggtcaa ccaaccaaaa gcgtttgcct tgttcaacgg
      721 ctcgggccat ttgctcaggc acgtaagact cttcagaaat caacacgatg tctggtgcat
      781 gcttagtcac acctgctgca atggtttcat gtgccgccag atcggcttgc gtgagcggtg
      841 agtcatcggc tttgtgctgc accagcgcgc tcgcacgccc ttctggatgt gtattggctg
      901 tctcatatac cgccatgatg gcctgccctg cacgcacggc catcggcagc aaccagtcca
      961 gcatctcgag cagatcctgt cgatcaccgc cacgcagttg ggtcgatttc acatcaactt
     1021 ccttggtcat tggcgataga ttgcatcatc ataaagaggc ttttgtttct tgtttcgtat
     1081 tatttgtttc ttgtttctgg tttcttcttt cttggctcat agcccacggc tcttaaccgt
     1141 taaccgtctt gatacctttt tgcgaattta gctgccacag acgacacaac ggccagctgc
     1201 gctggccgtt gttttagtca gactgtcacc caaacatctt ggggcaactg tccacacttg
     1261 gatacacaga ctcgttctta caaccgacta caagcccttc tctagctcag gcacggcttc
     1321 aaacagatct gccaccaagc cgtaatccga tacaccgaag atcggtgcct cttcatcttt
     1381 gttgatggcc acaatgacct tagagtcttt catgccagcc aagtgttgga tagcacctga
     1441 gataccaacc gcgacataca actgtggagc gacgatcttg ccggtctgac ccacctgcca
     1501 gtcgttcggt gcaaatccag catcgacggc cgcacgcgag gcaccgagcg ctgcaccaag
     1561 cttgtcagcc aaaggctcaa gcactttgaa gttctcagcg ctgcccatac cacgaccgcc
     1621 tgaaaccacc acaccagcgc cggcgagttc aggacgatcg cttgcggcaa gctcacgacc
     1681 cacaaaactt gacttgccgc tgtcgctaac cgccgtcagc gtctcaacag ccgcactgcc
     1741 accttctgct gcgccggcgt caaacgccgt ggtacgcacg gtcaacacct tcctggcatc
     1801 ggccgactgc accgtggcaa tggcattgcc ggcgtagatg ggacgctcaa acgtgtcggg
     1861 tgacaccacc gccgtgatgt ctgagacttg tgccacatcg agcttggccg ccacgcgtgg
     1921 cgccacgttc ttgcctgaga cggtggcggg aaacaaaatg tgactgtatt gatcg
//
LOCUS       DATBNL010000599         1590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87238, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000599 DATBNL010000000
VERSION     DATBNL010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87238"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..>1590)
                     /gene="mdoH"
                     /locus_tag="VIC30_10315"
     CDS             complement(147..>1590)
                     /gene="mdoH"
                     /locus_tag="VIC30_10315"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF003958.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HEY7804809.1"
                     /translation="REFHVYVLSDTTDSQMAEQEAQAFEALARQWQSSLGMTYRRREH
                     NTGYKAGNIQDFCAQWGDRHELAVVLDADSLMCASAVRKLVLMMQSNPQIGILQGLVV
                     GLPAASAFTRLFQFGMRLGMRSYTLGSAWWQGDCGPFWGHNAVIRIAPFAKHCQLPVL
                     RDRRGREQHILSHDQVEAVLMRRAGFEVRVYPLEDQSFEENPPNLLDFVARDLRWCAG
                     NMQYARLLSLPGLALVSRLQLVLAILMFLGAPAWLSLFAVLGWSVHQSSWSQVFDIPM
                     LATVFGMLVAMISLPRLASALVVLCRAEAKRSFGGGVRFSLGLLLEQVFSVLVTPVMW
                     VSQTILLLGLPFGRRISWGTQNRDAQQIGWLTAIRALGLHTLLGIALGWLWIDLQTPT
                     TWAVAYFLAGLWLAVPFAVISSWPKLGQLFRRFKLAGVPEEFTHSRFLSERYELEQCP
                     SQSLSQQPSQHPGQHPSASAPVTPSFEAGR"
BASE COUNT          430 a          508 c          384 g          268 t
ORIGIN      
        1 gtatcgacca ctcgcccaaa caggattggt tcggccaata acgcgcccac caaaaatacg
       61 ttagctaaca tcaaccaccc ggccgtgcgc cgatcatgac ccaacagcgt aaaaacccga
      121 cgataaagcg ttgtcaggcg catgccttag cggcctgcct caaacgatgg cgtcacaggc
      181 gccgaagcac tcgggtgctg gccggggtgt tggctcggtt gctgacttag actctgactc
      241 ggacactgct cgagctcata gcgctctgac aagaaccggc tatgcgtgaa ctcctcaggc
      301 acaccagcca acttgaaccg ccgaaagagt tgtccaagct taggccaaga ggagataacg
      361 gcaaacggca ctgccaacca aagcccagcc aggaagtaag caacagccca agtcgtcggt
      421 gtctgcagat caatccacag ccagccaagc gcgatgccaa gcaaggtgtg cagcccaagc
      481 gctcgtatcg ccgttaacca gccgatctgc tgggcatcac ggttttgtgt gccccaagaa
      541 atgcggcgac caaacggcag tcccaacaat aagatggtct gcgacaccca cataactggc
      601 gttaccaaca cagagaagac ctgctcgagc aacaacccca agctgaaacg aaccccacca
      661 ccaaaactgc gtttggcctc agcccgacac aaaaccacca atgcactggc cagacgcggc
      721 aacgaaatca tcgctaccaa cataccaaac accgtggcca gcatgggaat atcaaacacc
      781 tgtgaccacg aagactgatg cacggaccaa ccaagcacag cgaacaagct cagccaggcc
      841 ggtgcgccca agaacatcaa gatcgctagc accaactgca accgactcac aagcgctaat
      901 cctggcaagc tcaatagcct agcgtattgc atgttgccag cgcaccagcg caaatcgcgc
      961 gccacaaaat ccagcaaatt aggcgggttc tcttcaaagc tttgatcttc gagtgggtag
     1021 acacgcacct cgaacccagc acggcgcatg agcaccgctt caacttgatc gtggctcagg
     1081 atgtgctgct cacgcccacg ccggtctcga agcacaggca attgacaatg tttggcaaac
     1141 ggcgcaatac ggatcaccgc attgtgaccc cagaaaggcc cacagtcacc ctgccaccag
     1201 gcactgccca aggtgtagga gcgcatgccc agtcgcatac caaactgaaa caatcgagtg
     1261 aatgcactgg ccgctggcaa accaacgacc aacccttgca ggatgccgat ttgcggattt
     1321 gactgcatca taagcacgag tttgcgtacc gcactggcac acatcaggct gtcggcatca
     1381 agcaccaccg ccaactcgtg cctgtctccc cattgcgcac aaaagtcctg aatattgccg
     1441 gccttatagc ccgtgttgtg ttcacggcga cgataggtca ttcctaagct cgattgccat
     1501 tgccgagcca acgcctcgaa tgcctgcgct tcttgctcgg ccatctgcga gtcggtggtg
     1561 tcactcaaca cgtaaacatg gaattcacgg
//
LOCUS       DATBNL010000600         1783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57018, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000600 DATBNL010000000
VERSION     DATBNL010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57018"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..1358
                     /locus_tag="VIC30_10320"
     CDS             177..1358
                     /locus_tag="VIC30_10320"
                     /inference="COORDINATES: protein motif:HMM:NF022514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2863 family protein"
                     /protein_id="HEY7804810.1"
                     /translation="MRKKLPTSKLPRAVNHVLASLRASFTSASRFEDRFWQSHLEQLI
                     QSHLSAGQDDVIESTLTELATIDTDQAHEWLEHVQAASQSLNIDIDGQKWQVLLVTSA
                     FSVWTRYQLPQVTLTKDDEAYLTQGIKQTVLAPNAVVQVLPRLLGLDELPRSYSETYQ
                     WLERLTNRAFGKRIPLPKTITLEPNPALLVDTRHLLFAAAVPEGEPLFRWQADVQLSE
                     SQCQDEWIAYVTPRLSQRMPGCQFHALTPRAYHSGLELSEQHIRMVAIDCASSWLHST
                     LELKHGDLRACIAAVGERTVQEYRVGYYRAGQTAVIYGTIWPVLEDEEMQQASAIDTF
                     DEITEVLKESGVSHVTRIPGVLWPESCDDCTAPFFPNVSGELVHIDLPDEVFDAPQHF
                     H"
     gene            1372..>1783
                     /gene="earP"
                     /locus_tag="VIC30_10325"
     CDS             1372..>1783
                     /gene="earP"
                     /locus_tag="VIC30_10325"
                     /inference="COORDINATES: protein motif:HMM:NF021598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEY7804811.1"
                     /translation="MRALSADLFCRVIDNLGDIGVMWRLARQLHDEKGWQVRLWVDDL
                     KSLGTIEPTIDRDKPQQVCQHVDVRRWLTSDPPIEPNPIVIAGFSCDLPPEYLKALAQ
                     QPTTLWLQLEYLSAQDWVASFHGLSSLRNDGLKPV"
BASE COUNT          407 a          499 c          467 g          410 t
ORIGIN      
        1 atcgttgggc catgaggacg gcacattggt tggcgttcgc gtcaaccccg ggttggctcg
       61 ctcgatccgt gtcgtactac ccggttccgt taagccatcg aaagccacac aggcgttcat
      121 gggaaccttg ggctgtccac gctagaatgg tgggctaatc gtttcaggct tacgttatgc
      181 gcaaaaagct gccaacttcc aaactgcccc gtgcggtcaa tcacgtattg gcatcgctta
      241 gggcctcatt tacgtccgcc agccgatttg aagatcgttt ctggcagtcg cacctcgagc
      301 agttgatcca gtcacaccta agtgcaggac aagacgatgt tatcgaatcc acgcttacgg
      361 aactagccac catcgacacc gatcaggcgc atgaatggct tgagcatgtg caagccgcca
      421 gccaaagcct gaacatcgac attgacgggc aaaagtggca ggtgttgctc gtaactagcg
      481 cattctcagt ctggacccgc taccaactgc cacaagtaac actgaccaaa gacgatgagg
      541 cttatctgac tcaagggata aagcaaacgg tattggcacc caacgcggtt gttcaagtct
      601 tgccacggct acttggctta gatgaattgc cgcgttctta ctcagagact tatcagtggc
      661 tcgagcgtct gacaaatcgt gcgtttggca aacgcatccc cctaccaaaa accatcacct
      721 tagaacctaa ccccgcgctg cttgttgaca ctcgccactt gctgtttgcc gcagccgtgc
      781 cagaaggcga gcccttgttt cgctggcagg ccgacgtgca actcagtgag tcgcaatgtc
      841 aggacgaatg gattgcctac gttacgccgc gcttaagtca acgcatgcct ggctgccaat
      901 tccatgcgtt aacgcctagg gcctatcaca gcggtttgga actgtctgaa caacacatcc
      961 gcatggttgc cattgattgc gccagttcct ggttgcacag cacgctcgag ctcaaacatg
     1021 gtgatttacg cgcttgtatt gctgctgttg gcgagcgtac cgtgcaagag taccgggtgg
     1081 gctactaccg tgccgggcag acagcggtca tttacggcac tatttggccg gtgttagaag
     1141 acgaagagat gcagcaagcg tcagccattg atacctttga tgaaatcacc gaggtgctca
     1201 aggaaagtgg tgttagccac gtcacccgca tcccaggcgt gctttggcct gagtcgtgtg
     1261 acgattgcac cgctcctttt ttccccaacg tatcgggtga actcgtacac atcgacttgc
     1321 ctgatgaggt gtttgacgcg ccacagcact ttcactgatc tgacctcaat catgcgcgca
     1381 ctgtctgcag acctgttttg tcgggtgatc gacaacctcg gtgatattgg ggtcatgtgg
     1441 cgcctagcac gccaattgca cgatgaaaaa ggctggcagg tcagattgtg ggttgatgat
     1501 ctaaagagtc tgggcacgat cgagccgacg atcgatcgcg acaaacccca gcaggtttgt
     1561 cagcacgtgg atgttcgtcg atggctcacg tcagacccac ctatagaacc caacccgatt
     1621 gtgattgccg gattctcgtg tgatttacca ccagagtacc taaaagccct cgcgcaacaa
     1681 cccaccacct tgtggctgca actcgaatac ctaagcgcac aggactgggt tgcgtccttt
     1741 catgggctga gctcattacg caatgacggg ctcaaaccgg tta
//
LOCUS       DATBNL010000601         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_67167, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000601 DATBNL010000000
VERSION     DATBNL010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67167"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..291)
                     /locus_tag="VIC30_10330"
     CDS             complement(49..291)
                     /locus_tag="VIC30_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009668075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEY7804812.1"
                     /translation="MLPTPEDIKKYIHAGLACDHLEVAGDGAHFEAVIVSPAFEGKRL
                     IARHQLVYAALGDRMRDEIHALSMKTLTPDEFEAQG"
     gene            complement(305..1102)
                     /locus_tag="VIC30_10335"
     CDS             complement(305..1102)
                     /locus_tag="VIC30_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804813.1"
                     /translation="MNQSRITPSADTPMRSGFYTLLYKELLRFWRVGFQTIAAPVITA
                     LLYLIVFVQVLQDRVKVYDAIPYVEFLIPGLMMMSMLQNAFANPSSSLIQSRVTGNLV
                     FVLLTPISTREFFAAYVLAAVVRGLAVGLTVWLVSLLFVPIPVTSLAWVLVFGTLGSA
                     MLGILGLIAGLWSEKFDQMAAFQNFLIMPLTFLSGVFYSIHSLPPFWQAVSHWNPIFY
                     TIDGFRYGFFGVSDSSPWMSLAVVFGFFAVLTLIAIRLLDSGYKLRT"
     gene            complement(1099..1845)
                     /locus_tag="VIC30_10340"
     CDS             complement(1099..1845)
                     /locus_tag="VIC30_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804814.1"
                     /translation="MKHWWQLLAKHRQTEGFKALDDVNLRVEYGEFFGLLGPNGAGKT
                     SLISILAGLSYATEGTARVCGHDVVSDFRLARRALGVVPQELVYDPFFTVMETLRIQS
                     GYFGLHHNDDWIEEVLHNLGLSDKTHANMRSLSGGMKRRVLVAQALVHRPPVIVLDEP
                     TAGVDVDLRRSLWEFISRLNQQGHTILLTTHYLEEAEALCGRIAMLKAGQIVALDTTD
                     ALLARVGGAGLEGAFMQIMQEAGKAPVDAP"
BASE COUNT          523 a          536 c          439 g          384 t
ORIGIN      
        1 caacctcgcc atttagcggc tgtccgcccg taatccgcag gcggtccatc agccttgcgc
       61 ctcgaactcg tcaggtgtga gcgttttcat ggaaagggca tgaatctcat cgcgcatgcg
      121 atcaccaagc gcggcgtaca ccaactggtg gcgggcaatc aaccgcttgc cttcaaaggc
      181 agggctgaca attaccgcct caaagtgcgc accatcaccg gcgacttcta ggtgatcaca
      241 agccaaacca gcgtgtatgt atttcttgat gtcctcaggg gttggtaaca tcgtctcacc
      301 tcaattaagt tctaagtttg tagccactat caagcagccg gattgcaatt agcgtcaaca
      361 ccgcaaaaaa accaaagaca accgccagac tcatccaggg tgaactatca gacacaccaa
      421 aaaacccata acgaaacccg tcaatggtgt agaaaatggg gttccagtgc gataccgcct
      481 gccaaaacgg cggcaggcta tgaatggagt aaaacacacc cgacaagaag gtcaacggca
      541 taattaaaaa gttctgaaac gctgccatct gatcaaattt ctcagaccaa agtccagcaa
      601 tcaaacccaa aatcccaagc atggcactac ccaacgtgcc aaacaccaac acccaggcca
      661 atgatgtcac tgggattggc acaaacagta gcgataccag ccaaactgtc agccccaccg
      721 ccaagccacg aaccacggcc gccaaaacat acgccgcaaa aaactcgcgc gtcgaaatcg
      781 gcgtgagcaa tacaaatacc aaattgccag taacacggct ttgtatcaac gatgaggatg
      841 ggttggcaaa tgcattttgc agcatgctca tcatcatcaa acctggaatc agaaattcta
      901 cataggggat ggcgtcatac actttgacgc gatcttgcaa cacctgcacg aagacaatca
      961 gatacaacag cgccgtgata acaggcgctg cgatggtttg aaacccaacc cgccaaaatc
     1021 gcaacagctc tttgtacaaa agcgtataaa acccggaacg catgggcgta tcggcactcg
     1081 gtgtgattct gctttggttc atggcgcgtc caccggggct ttacccgctt cttgcatgat
     1141 ctgcataaac gccccttcca ggccggcgcc accgacacgc gccaagagag catccgtggt
     1201 gtcaagcgcc acgatctggc ctgccttaag catggcaatt cgaccacaca atgcctcggc
     1261 ttcttcaaga taatgtgtgg tcaataaaat cgtgtggccc tgttgattca acctcgaaat
     1321 gaattcccaa aggctgcgtc gcaaatcgac atcgacccca gcggttggct catcgagcac
     1381 aatcaccggc gggcggtgca ccagcgcttg tgcaacgagc acgcgtcgct tcatgccgcc
     1441 tgagagagaa cgcatgttgg catgtgtttt gtcggacagg cctaggttgt gcagcacctc
     1501 ttcgatccaa tcgtcgttat ggtgcaaccc aaaataacca gactgaattc ttagcgtctc
     1561 catgactgta aagaaggggt cgtagaccaa ttcttgcggc accacgccaa gtgctcggcg
     1621 tgccaatcta aagtcagaca ccacatcatg cccgcacaca cgtgctgtac cttcagtggc
     1681 ataagacaag ccagccagaa tagagatcag cgaggtttta cctgctccgt tgggcccaag
     1741 caaaccaaaa aactcgccgt attcgacgcg caaattgaca tcatctagcg ctttaaaacc
     1801 ttcggtttgc ctgtgcttgg ctaagagctg ccaccagtgt ttgatggcag gttggtaggt
     1861 tttatggata tggtcaaact cg
//
LOCUS       DATBNL010000602         1958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_76971, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000602 DATBNL010000000
VERSION     DATBNL010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76971"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VIC30_10345"
     CDS             complement(<1..445)
                     /locus_tag="VIC30_10345"
                     /inference="COORDINATES: protein motif:HMM:NF020068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEY7804815.1"
                     /translation="MANKRVGAKHALGFAVISVLIAWGSPAVAQFAPDAGAIMRETDQ
                     LRAPQEPRLSPRTIAPAPVKPDPTAVQFMVKSFRLTGVTLVPIAELQTLLKPWLNREI
                     TFEDLDRALAAIANFYQDRGWFVRPQLPAQDIVGGVVTINVIEAKL"
     gene            complement(457..930)
                     /locus_tag="VIC30_10350"
     CDS             complement(457..930)
                     /locus_tag="VIC30_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804816.1"
                     /translation="MATNKPTSDSAQDKPEVPAQVETKGEGSADKQNTAASAAAATPE
                     GQSQQAVNLTGRAVFAVETTAAGVVVRTAFLTEDQRLLDMPAIFPDMVYALNVIDDLR
                     RQVMQHFSQAAQVGAQVIANQARDQQQKAAASDQGQNQGQDQDPNQDSTTTTIKG"
     gene            complement(1147..>1958)
                     /locus_tag="VIC30_10355"
     CDS             complement(1147..>1958)
                     /locus_tag="VIC30_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804817.1"
                     /translation="PSQDEDKVYDDEDRFDFVGLINVRGSIDTAGDLLLAGKKVDFWG
                     SEQTPIELRSDGGVINVIQGLERSWELNDDGVLVPTDAIVELDLENVTVSLGEDASLG
                     QEFVVNSDGQAQVQRDEPPVSAAPEAPNLPEGPNLPDTESPVVQVPGDETPVVQVPDT
                     NTGIGVVDSPVSSSVNVASAGASIVASDNALRSEPNDFRSMGVRAANGMISLDQVREA
                     VAIRNDKLMTITAEVEIGSMTVSGDSTASGQIDCELPENVDLLECRPEGDQ"
BASE COUNT          428 a          550 c          484 g          496 t
ORIGIN      
        1 cgagcttggc ttcgatcaca ttaatggtca ccacgccgcc aacaatatcc tgagcaggca
       61 actgcgggcg tacaaaccag ccacgatcct ggtagaagtt ggcgattgcc gccaacgccc
      121 gatcgagatc ttcaaaggtt atttcacggt ttagccaggg cttaagtaac gtttgcagtt
      181 cagcaattgg caccaaggtc acaccagtta agcgaaacga cttgaccata aactgcacag
      241 cggtcgggtc aggcttaact ggtgcaggtg cgatcgtgcg cggggataaa cgtggctctt
      301 gcggtgcacg caactgatca gtctcacgca tgattgcgcc ggcatcgggt gcaaactgtg
      361 cgaccgccgg cgacccccaa gcgatcaata cactgatcac cgcaaagcct agtgcgtgct
      421 tagccccaac acgtttgttt gccatggcgc ccgtacttaa cctttaatgg ttgtggtggt
      481 ggagtcttgg tttgggtctt ggtcttgacc ttggttttga ccttggtcag aagcagctgc
      541 tttttgttgt tgatcacgcg cttgattggc gatcacttgt gcaccgacct gtgctgcttg
      601 tgaaaaatgc tgcatcactt ggcggcgcaa gtcatcaatc acgttcaggg catagaccat
      661 atcagggaaa atcgcaggca tgtccaacag tcgttggtct tcagtcagga aggctgtgcg
      721 cacgaccacc ccagctgcag tggtctcaac ggcaaacacc gcacggcccg tcaagttaac
      781 ggcctgctga gattgtcctt ctggcgttgc agccgcggca ctggcagcgg tgttttgttt
      841 gtctgcgcta ccctcgcctt tggtctcgac ctgagcgggc acctcgggtt tgtcttgtgc
      901 gctatcgctt gtgggtttgt ttgtagccat gattcacctt gtatcgtatt ttgcaaacag
      961 cgctgccttt agacagcatc tcaccagcct gtgcaaagca catgcttggc tttgtaactg
     1021 tagcccgata ttgtgacctc ggtcgccaca tggcaacatc ccatgaaatc atgagattcc
     1081 gtgctttttt gtcgaatgcc tgccctatgt gccatcgagg gaaatcattc caacagatcc
     1141 ccaaacttac tgatcccctt cgggccgaca ctccaacaaa tcgacatttt ctggcaactc
     1201 acagtcaatt tgtccggacg cggtgctatc accagacact gtcatgctgc cgatctctac
     1261 ctcagcagta atcgtcatga gtttgtcatt acgtatcgca acagcctcac gcacttgatc
     1321 gagtgaaatc atgccgttgg ccgcacgcac acccatgctt ctgaaatcgt tcggttcact
     1381 gcgaagtgca ttatctgagg cgacaatgga ggcaccggct gatgcaacat taacgcttga
     1441 tgaaactggt gagtcaacca caccaatacc ggtatttgta tctggcacct gaaccactgg
     1501 tgtctcatcg cccggcacct ggacaacagg gctttctgta tcgggcagat tggggccttc
     1561 tggcagatta ggtgcttctg gcgcagctga tactggcggt tcatcacgct gaacttgcgc
     1621 ctgcccgtcg ctattgacaa cgaactcttg acccaagctt gcatcctcac cgaggctcac
     1681 agtcacgttt tctagatcaa gctcgacaat cgcatcagtc ggcactaaga caccatcatc
     1741 gttgagctcc caacttcttt cgagcccttg aatgacgtta ataacaccgc catcggagcg
     1801 tagctcgatt ggcgtttgct ctgaacccca gaagtccact tttttgccgg ccaacagtag
     1861 atcgcctgct gtgtcaattg acccacgaac attaatcaaa cctacaaagt cgaagcgatc
     1921 ctcgtcatcg tagaccttgt cttcgtcttg gcttggtg
//
LOCUS       DATBNL010000603         2166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57048, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000603 DATBNL010000000
VERSION     DATBNL010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57048"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..880
                     /locus_tag="VIC30_10360"
     CDS             <1..880
                     /locus_tag="VIC30_10360"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016450689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006097 - glyoxylate cycle [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HEY7804818.1"
                     /translation="TSVNLKACIGAASSRVAFINTGFLDRTGDEMHTAMQAGPMIRKG
                     DMKASAWIQAYERNNVLVGLTCGLRGKAQIGKGMWAMPDLMAEMLKQKIGHPKAGANT
                     AWVPSPTAATLHALHYHQVSVADIQKELEKTSADDLREELLTGLLTVPVATDTNWTDE
                     QKQQELDNNIQGILGYVVRWVDQGVGCSKVPDIHNVGLMEDRATLRISSQHVANWLHH
                     GIVSEAQVRATFERMAAVVDQQNAGDPLYKPMAGHFDTSMAYQAACDLVFKGMAQPSG
                     YTEPLLHAWRLKVKAA"
     gene            1219..>2166
                     /locus_tag="VIC30_10365"
     CDS             1219..>2166
                     /locus_tag="VIC30_10365"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003078472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY7804819.1"
                     /translation="MKHAIKHYLTQFIGGASLLAATSIAIAAQPLLTPQDVQQIASSP
                     DVRVIDIRAPKDYKAGHIQGAVNAPYGTWRGPVSNPGELPELKELTKLVQNLGLTPQT
                     HAVVVSSGANDTDFGAAARVYWTLKVLGLENLSILNGGVKAWQTAGLPLSTTAPNVAK
                     SDFEPSLDESLLVSQAQLSQDAESSNAVLVDARPASFFNGDTRHAAAKTPGTLPGAVN
                     VAHSVWFKPGTSEVIDATQAKSVAAKYNLANSNKEIVSFCNTGHWAATNWFVLSELVG
                     DPDVKLYAGSMVDWTRASNALPMDNVPGRIKQLWIDAQLW"
BASE COUNT          536 a          644 c          553 g          433 t
ORIGIN      
        1 caccagtgtc aacttaaaag cctgcattgg cgccgcctca agccgtgtgg cttttatcaa
       61 caccgggttc cttgatcgca ccggtgacga gatgcacaca gccatgcaag ccggccccat
      121 gatccgcaaa ggtgacatga aagccagtgc atggatccaa gcctacgaac gaaataacgt
      181 gctggtgggc ttgacctgcg gactgcgtgg caaagcgcaa atcggcaaag gcatgtgggc
      241 catgccggac ctgatggctg aaatgctgaa acaaaaaatc ggccatccca aggcaggtgc
      301 taacaccgct tgggtaccga gcccaacggc agccaccttg cacgcgctgc actaccacca
      361 agtcagtgtg gctgacattc aaaaggagct ggagaaaacc agtgcggacg atctgcgcga
      421 agagctcctg acgggactgt tgacggtacc cgtggccact gacaccaact ggactgacga
      481 gcaaaagcag caagaactcg acaacaacat ccagggcatc ttgggctacg tggtgcgttg
      541 ggtagaccaa ggcgtgggtt gctccaaggt gccagatatt cacaacgtgg gtttaatgga
      601 agaccgcgcc acgctgcgta tctccagcca gcatgtggcc aactggctgc atcacggcat
      661 tgtgtccgaa gcccaagtgc gcgctacctt tgaacgcatg gctgccgtgg ttgaccaaca
      721 aaacgccggt gatccgctct acaagcccat ggcaggtcac tttgatactt ccatggctta
      781 ccaggcggct tgcgatctgg tgttcaaggg catggcgcaa ccaagcggct acaccgaacc
      841 gctgctgcac gcctggcgct tgaaggtcaa ggcagcttga attgagttga tctaagctga
      901 gcgacacgac cctgactaga cccgtcgaca gttaaaccct gtagctctag tcttaaaagc
      961 cggctgctag gcaaattgcc ttgcagccgg cttttttatt tccccctaga cgcgacgatc
     1021 cgccttcatc ccatctgccc tcatcccatc accctattca ccgtcaccgc accacttgcc
     1081 accaacccgc aacccgcccc cacaacacca ccctttatta ccttaagaaa ttaaagaaag
     1141 agaaatatgt agttcacaga tctatagcga atgctcacaa tcgagggtct tgatacatct
     1201 gaatcgttga gctgaaacat gaaacacgcc atcaaacact acttaaccca atttatcggc
     1261 ggcgccagcc tgcttgcagc caccagcatt gcgatagcag cacagccgct attaacgcca
     1321 caagatgtgc agcaaatcgc ctctagccct gacgttcgcg tcatcgacat ccgcgcaccc
     1381 aaggactaca aagccggtca tatccaaggc gcggtcaatg caccctacgg cacttggcgt
     1441 ggaccggtat cgaatccggg cgagttgcct gaattgaaag aactcaccaa gcttgtacag
     1501 aaccttggcc tgacgccaca gacccacgcc gtggtggttt ccagtggtgc caatgacacc
     1561 gatttcgggg ctgcagctcg cgtgtactgg acactcaaag tacttggtct agagaaccta
     1621 tcgattctca atggtggcgt caaagcttgg cagacggcag gactgccgct gtcgacaacc
     1681 gccccgaatg tcgctaagag cgactttgag cctagcttgg acgagtcatt gcttgtgagc
     1741 caagcacaac tcagtcaaga cgccgaatct tctaatgcgg ttttagtcga tgcccgccct
     1801 gcttcgtttt ttaacggaga cacgcgtcac gccgccgcaa aaaccccggg caccttaccg
     1861 ggtgctgtga acgtggctca ctcggtgtgg ttcaaacccg gcaccagcga agtcattgac
     1921 gcaacacaag ccaaatccgt tgccgccaaa tacaacctgg caaatagcaa caaagaaatc
     1981 gtgtcgtttt gcaataccgg ccattgggcc gcgaccaact ggtttgtgtt gtctgaactg
     2041 gtcggtgacc cggatgtgaa gctctacgcc ggctccatgg tggattggac gcgcgcctca
     2101 aacgcactgc ccatggacaa cgtcccgggt cgcatcaagc agctttggat tgatgcccaa
     2161 ttatgg
//
LOCUS       DATBNL010000604         1689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87275, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000604 DATBNL010000000
VERSION     DATBNL010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87275"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VIC30_10370"
     CDS             <1..242
                     /locus_tag="VIC30_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEY7804820.1"
                     /translation="SAAFMRLIEPVAFDAPDGQPVDILLVIVVPEEATQQHLDILAEV
                     AQRLSDDSVISALRTESDALRVHELLTAKSTSAAT"
     gene            278..1210
                     /gene="hprK"
                     /locus_tag="VIC30_10375"
     CDS             278..1210
                     /gene="hprK"
                     /locus_tag="VIC30_10375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HEY7804821.1"
                     /translation="MLVVKELVEDNAEDVAFEWLAGQTGDVRPLPDDGRSAADLIGHL
                     NLIHPARIQVFGHEEMAYYRRFDPKRRIRHIEELANGGVPALILAHGLETPADLVEAC
                     DRTGIPLLRTGVSAAETIDRLRIYLSKRFAPKITVHGVFMDVLGLGVLITGESGLGKS
                     ELALELISRGHGLVADDAVELSRTAPHVIDGHCPVLLQNMLEVRGLGLLNIRTIFGET
                     SVRRKMKLKLIVHLVRASAQEKFERLPLQDTTQDILGEPITKATLQVAAGRNLAVLVE
                     AAVRNTILKLRGIDTLQEFMDKQAQAISEGGKHA"
     gene            1215..>1689
                     /locus_tag="VIC30_10380"
     CDS             1215..>1689
                     /locus_tag="VIC30_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEY7804822.1"
                     /translation="MQSIVPITGMSGSGKSVALQWLEDAGYACVDNLPVPLLRDLIAN
                     ARHGHNRRLAVAIDARSQGDLRELPDMLDALRKIGTAIRVIFLDADDNTLVQRYSESR
                     RRHPLADRVAANNQPVSLKACIALERELLDRLRNREHVIDTSALKPVQLRDWMRDL"
BASE COUNT          385 a          479 c          457 g          368 t
ORIGIN      
        1 cctcggctgc gtttatgcgt ttgatcgaac cggttgcatt tgacgcgccc gatggacaac
       61 cagtcgatat actgctggtc atagtggtgc cggaagaggc aacgcagcag catctcgata
      121 ttctggccga ggtcgctcaa cgactgtctg atgacagcgt gatcagtgcc ttgcgaacag
      181 aatcggatgc cttgcgggta catgagcttt taaccgctaa aagtacctct gctgcaactt
      241 gaactggcat caagcaacca acgcttgagg acaaaccatg ctggtggtca aagaactggt
      301 cgaggacaac gctgaagatg tcgcctttga gtggctggct gggcaaaccg gtgatgtacg
      361 acctctgccc gatgatggcc gctcagccgc ggacttaatt ggccacctca acctcatcca
      421 tccagcgcgc atccaggtgt tcgggcacga ggagatggcc tactaccggc gctttgatcc
      481 aaaacggcgc attcgacaca ttgaagaact ggcaaatggt ggtgtgcctg ctcttatttt
      541 ggcgcacggt ctagaaacac ccgctgacct agttgaagcc tgtgaccgca ccggtattcc
      601 tttgctacgc actggcgtgt ctgcagccga aaccatcgac cgtcttcgca tttatttatc
      661 caagcgattt gccccaaaaa ttactgtgca cggcgtattc atggacgtac tcggccttgg
      721 cgtgctcatt accggagaat cagggctcgg caaaagcgag ttagcacttg agctgatttc
      781 acgcggacac ggtttggtcg cagacgacgc cgtggaactg tcgcgcaccg ccccgcatgt
      841 tatcgatggg cactgtccag tgcttttaca gaacatgctc gaagtccgcg gtctaggctt
      901 attgaatatc cgcaccatct ttggtgagac ctcagtgcgc cgcaaaatga agctcaaact
      961 gatcgttcat ctggtgcgcg cctcggcgca agagaaattc gaacgcttgc ctttgcaaga
     1021 cacaacacaa gacatcttgg gtgaaccgat caccaaagcc acactgcaag tggcagccgg
     1081 ccgcaacctt gcggtgctgg tcgaagccgc ggttcgcaac accatcctca agctccgtgg
     1141 catcgacact ttgcaagagt tcatggataa gcaagcacag gccatctccg aagggggtaa
     1201 acatgcctga aggcctgcaa agcattgtgc cgatcaccgg gatgtcgggt tcgggtaaat
     1261 cggtggcact gcaatggttg gaagacgcag gctacgcctg tgtcgacaac ttgcccgtgc
     1321 ctttgttgcg cgacctaatc gctaatgccc ggcatgggca caacaggcgg ctggccgtgg
     1381 ccatcgacgc ccgctcacaa ggggatttgc gcgaactgcc tgacatgctc gatgcattac
     1441 gcaagattgg caccgcgata cgcgtgatct ttcttgatgc agacgacaac acattggttc
     1501 aacgctattc tgaatcgcgt cggcgccacc ctctagctga ccgcgtggct gccaacaacc
     1561 agcctgtttc gcttaaggcc tgcattgcac tcgagcgcga attgctcgac cggttacgca
     1621 accgagaaca tgtgatcgac acatcagcct taaagcccgt acaattgcgt gactggatgc
     1681 gtgacctca
//
LOCUS       DATBNL010000605         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167106, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000605 DATBNL010000000
VERSION     DATBNL010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167106"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1433)
                     /locus_tag="VIC30_10385"
     CDS             complement(<1..1433)
                     /locus_tag="VIC30_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7804823.1"
                     /translation="MNKITSIGYQFVCDHYKLSAAAIERPCKIAPVHKLTETPDSLLV
                     PARTAPVVDDPIEHILFALKHEGTNLQILARALTRIPAQAIHQRICKSPTSRYVRLLG
                     FLWEAFNNRQLEGSLGIAGPTIDVFDSKRYITAPGQRNTRWKVNFNGLGSIHYCVTVR
                     RTAAINEGLELDILSQTRAFMNQLGTPETERALAWAYLHEAESSFAIERESVPQDKAQ
                     TFVALLKQAHTPRPMSEDYLVELQNTAITNPFDLAASYRHQQNWLSGPLRGAAGITYV
                     PPPPEMVPALMDGVLTFANELPKTIDPLVAATIASFGFVFVHPFMDGNGRLSRFLFHY
                     ALCQSGQLTNGLLLPVSIAMKRHELQYLRALQAFSLPVREQWHVRWIDQDNYDFEFTG
                     DKATYQYWDATPMVEFSLDMAKQALDHDLKKEIQFLRQYDHIYRTIDQQFDVRGSDLT
                     TLVISCLQNNGRVSNNRRKQFHLTVPAA"
BASE COUNT          453 a          406 c          488 g          473 t
ORIGIN      
        1 gcggcaggca ctgtcaagtg aaactgcttt cgtcgattgt tggagactcg gccattgttt
       61 tgtaggcagc tgatgaccaa agtggtcagg tcagagccac gcacatcaaa ctgttgatca
      121 atcgtgcggt agatgtggtc gtattggcgt aaaaactgta tttctttctt gagatcgtga
      181 tctagtgctt gtttggccat gtctaggctg aactcgacca tgggtgtggc atcccagtac
      241 tgataggtgg ctttgtctcc agtgaattcg aagtcatagt tgtcttggtc aatccagcgc
      301 acatgccatt gctcacgaac cggcagtgag aatgcctgta gtgccctgag atattgcagc
      361 tcgtggcgtt tcatggcgat cgagactggc agcaacaaac cattggttag ctgacctgat
      421 tggcaaagcg cgtagtgaaa taaaaaccga gacaatctgc cgttgccatc catgaaagga
      481 tgaacaaaca cgaaaccgaa cgatgcgatg gttgcagcaa ccagcggatc aatcgtttta
      541 ggtagttcat tggcaaacgt cagtaccccg tccattaggg caggtaccat ttcaggcggt
      601 ggtggaacat aagtgattcc agcagccccc cgcaaagggc cgcttagcca gttctgttga
      661 tgacggtacg aggcagccag atcaaatgga ttggtgatgg ctgtgttctg tagttcgact
      721 aggtagtctt cgctcatggg ccgtggcgta tgggcttgct tgagcagggc gacaaacgtt
      781 tgcgctttgt cttgcggtac tgactcgcgc tcaatggcaa acgagctctc ggcttcatgc
      841 aggtaagccc atgccagcgc tctctcagtt tctggtgtgc cgagttgatt catgaacgca
      901 cgtgtctgac tgagaatgtc cagttccaac ccttcgttga ttgcggccgt gcgcctgacc
      961 gtgacgcagt aatgtatgct gcccagacca ttaaagttaa ctttccaacg tgtattgcgt
     1021 tgtccgggtg cagtgatata gcgtttggaa tcaaacacat cgatcgtcgg gcctgcaata
     1081 ccaagagagc cctcaagttg ccggttgttg aaggcttccc agagaaatcc caacaaacgt
     1141 acataacgac tggttggcga tttgcagata cgctggtgga tagcctgcgc gggtatgcgt
     1201 gtcagagccc gcgcaaggat ttgtaggttg gtaccttcat gctttaacgc aaacaggatg
     1261 tgttcgatcg ggtcatcgac gaccggtgcc gttcgggcag gcactaagag tgagtcgggt
     1321 gtttccgtta gtttgtggac tggcgcaatt ttgcaggggc gctctatcgc tgctgcagac
     1381 agcttgtagt ggtcgcagac gaactgatag ccaatcgatg tgattttgtt caaagtcgtg
     1441 tgattttatt aaaaatgagc atatcactag tttttttatt aaaaatgggt ttttgacaag
     1501 taaaaattaa taacctagtg gcaaactgga aaaatagagg cgagtaccga agaaaagttg
     1561 catgaagaaa agtgtcgaat ccagccatcc tcaatggctg ttgccgattg gccgctttcc
     1621 aagcttcact acacttttac ccgcataaga atgtagctaa gcgcactttt atgcgcataa
     1681 aaaagcagaa atcgacattt ttatgcgcat aaaagtgtca acctcaattc aaccttgctt
     1741 caagtgcacg tcaacttaat gtcaaccttg aggcttggca agattggaac gtgcaatgca
     1801 ggctaaggca ggacaggact
//
LOCUS       DATBNL010000606         1992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147057, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000606 DATBNL010000000
VERSION     DATBNL010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147057"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VIC30_10390"
     CDS             complement(<1..465)
                     /locus_tag="VIC30_10390"
                     /inference="COORDINATES: protein motif:HMM:NF041043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BPSS1780 family membrane protein"
                     /protein_id="HEY7804824.1"
                     /translation="MQAVSLPASAGWGWITKGWALFKRQPMALFSWAMFVTLVLIFAT
                     LTAPIGPLVFIAFMPAITFITLSITRHVDQGERLSPLMWFSALKVPGIFKKLLMLGVL
                     YVFICLSVGFLVFLPFAGELNQAMQTLMDTQDAEPLMNALQTPLLTFAAFYFV"
     gene            complement(465..1442)
                     /locus_tag="VIC30_10395"
     CDS             complement(465..1442)
                     /locus_tag="VIC30_10395"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEY7804825.1"
                     /translation="MAVFTSVTDDQARALLKDYQVGEFRSLTGISAGIENTNYFLDTD
                     VGSYVLTIFEVLTAEQLPFYVELMYCLASRGVPVPMPQTRRDQSRISSLHGKPAIIVT
                     CLSGQWVREPTLAHCELAAQTMARLHLEGAGFERQQANLRGFYWWQATAPKLTPYLTA
                     GQHDLLWQALEEQTQVRSDAGLAQLPMGPAHCDYFRDNVLFSGSNEAPVMGGVIDFYF
                     AGCDHWLFDIAVAVNDWCIERDTGELLPDHVQAWLAAYNSIRPLTDGERQQWPCMLRA
                     AALRFWISRLYDYHLPRPAETLTPHDPEHFERILRSRMTQPIAAIPENF"
     gene            1560..>1992
                     /locus_tag="VIC30_10400"
     CDS             1560..>1992
                     /locus_tag="VIC30_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEY7804826.1"
                     /translation="MNPSDWQLCVAPMIDVTDRHCRFFHRLLAPRSRLYSEMTTTGAL
                     IFGDQARHLDFNESEHPVALQLGGSDPQELAQCARIGQRWGYDEINLNCGCPSERVQK
                     GAFGACLMREPALVADCIKAMQDAVDVPVTVKHRLGLDGATD"
BASE COUNT          484 a          516 c          542 g          450 t
ORIGIN      
        1 tacaaagtaa aacgcggcaa acgttagtag cggcgtttgc aacgcattca taagcggttc
       61 agcgtcttgg gtgtccatca atgtttgcat ggcctgattc aattcacctg caaatggcaa
      121 aaacaccagg aatcccacac tcaaacagat aaaaacgtac agcacgccaa gcatcagtaa
      181 ctttttgaat atgccaggca ccttcaaggc agagaaccac atcagtgggc tcaggcgctc
      241 cccttggtcg acgtgacgcg taatcgacag ggtgatgaac gtaatggcag gcatgaaggc
      301 aatgaatacg agagggccaa tcggcgcggt caatgtggca aatatcaaca ccaacgtcac
      361 aaacatggcc cagctaaaca gcgccatggg ttggcgttta aacaatgccc agcccttggt
      421 gatccagccc cagccggcag atgcgggtaa ggagaccgct tgcattaaaa attctccggg
      481 attgcagcaa tgggttgtgt catgcgtgat ctcaaaatgc gttcaaagtg ttcagggtca
      541 tgcggggtta acgtttcggc tggacgtggc aaatgatagt cgtataaacg cgaaatccag
      601 aaacgtaagg ctgcggcccg tagcatgcag ggccattgct ggcgttcgcc gtccgtcagc
      661 ggcctgatgc tgttgtaggc tgcgagccaa gcctgtacgt gatccggcag cagttctcca
      721 gtatcgcgct caatacacca gtcgttaact gcaacggcga tatcaaacaa ccagtgatca
      781 caaccagcaa aataaaaatc aatcacgccc cccatcactg gcgcttcatt gctgccacta
      841 aagaggacgt tgtctctaaa gtaatcacaa tgtgccggtc ccatcggtaa ttgtgcgagt
      901 cccgcgtcac ttcgcacctg cgtttgttct tctagggcct gccacagcag gtcatgctgc
      961 ccagcggtga ggtagggcgt tagtttaggt gccgttgcct gccaccagta aaatccgcga
     1021 agattcgctt gttggcgctc gaacccggct ccctcaaggt gtaagcgcgc catggtttga
     1081 gcggcgagct cacagtgcgc aagcgtgggt tctctgaccc actggccaga taggcacgtc
     1141 acgatgatgg cgggcttgcc atgcaagcta gaaattcggg attgatcacg gcgggtctgg
     1201 ggcataggga cgggtacgcc acgactggcc aagcaataca tgagctcgac atagaagggc
     1261 aattgctcgg ccgtcaggac ttcaaaaatg gtcagtacat aagacccgac atcggtgtcc
     1321 agaaagtagt tggtgttttc gataccagcc gatatgccgg tgagacttcg aaactcaccg
     1381 acttgatagt ctttgagcaa tgcgcgcgct tgatcatcag tgaccgatgt aaaaacagcc
     1441 attctgggca ttccgtcatt gggttgcggg gcatcgacat ttcagcatca gttgctcatg
     1501 tcgagtgatt cattgtagtt cagctgtgtg agcgattaaa atcatgcgcc atgacccaaa
     1561 taaatccctc agactggcag ctgtgtgtgg cgccaatgat tgacgttaca gatcggcatt
     1621 gccggttctt tcatcgatta ttggccccca gatcgcgcct ctacagcgag atgacgacca
     1681 ccggcgcctt gatttttggg gatcaggctc gccatcttga cttcaatgaa tccgagcacc
     1741 cggttgcctt gcagctcggt ggttcagatc cacaggaact cgcgcaatgc gctcgtattg
     1801 gccagcgctg gggctacgac gaaatcaatt taaattgtgg ctgcccctca gaacgcgttc
     1861 aaaagggtgc ttttggtgct tgtttgatgc gcgagcccgc gcttgtggcc gattgcatca
     1921 aagccatgca agatgctgtg gatgtgcctg tgactgtgaa acatcgcttg ggcttagacg
     1981 gcgcgactga ct
//
LOCUS       DATBNL010000607         3133 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_67225, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000607 DATBNL010000000
VERSION     DATBNL010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3133
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67225"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1034)
                     /gene="rsmI"
                     /locus_tag="VIC30_10405"
     CDS             complement(78..1034)
                     /gene="rsmI"
                     /locus_tag="VIC30_10405"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEY7804827.1"
                     /translation="MTKAPPAWETLSTRFEQQHWPEAALYVVATPIGNLMDLSLRAWY
                     VLGMVDAIAAEDTRSSRPLLQAWNIDTPLLAAHRHNEREAGAAIIERLAQGQRIALIS
                     DAGAPAISDPGGRLVQDVRQAGFEVVVVPGPSAAIAALMASGASTDQHPAFTFLGFLP
                     NKQAARQRVLRQWQSVESSLVMFEAPHRIVSLLEDLNEVFGDQRQVSLCRELTKRFEQ
                     TVTLPLQASVPWVQADHHREKGEYVVVLHPSQASGLSDDDGQDGAQDETWQSAQRLSW
                     MGALLSVLSTRDAAKVMAKALSLPKDECYANLVAYAKTHSRP"
     gene            1135..3036
                     /locus_tag="VIC30_10410"
     CDS             1135..3036
                     /locus_tag="VIC30_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008443485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HEY7804828.1"
                     /translation="MTLSLPSTLQPNDLPDIVVLLDDQLAPADVARSRVYRGLKHCLR
                     VDDPDTLWTALKTMRQGLSDGLFAVLLLDYELGELLQGLPPRAPSETPPLTPPQTPTP
                     TDGSFSHILLFSECQCLTAPEVDTWLDEQCQARVVHQTSAAHRPVLTGWQPNVTEAEF
                     EQAIATIHQRIESGDTYQVNLCFAVTAALNGDPVALYRELRQHQRVAYGALIGLPDGR
                     WVLSRSPEQFVSLNDGWLQARPMKGTADVNSTVDLATDPKNQAENVMIVDLLRNDLGR
                     LAVPGSVSVPQRFDVQRYGDVLQMTSTVQAKPRATVDWAELLKALFPCGSITGAPKHR
                     TMQIIRELEKGPRGLYTGAIGWVDPGASEQLNEFCLSVPIRTLTVSALMPERHRRVRL
                     GVGAGITYSSTARDEWAECSLKARFVSRLVNQAHLFETMRAHRQSGIAYLERHLARLG
                     ASAHALGLRFDATDARGQLQSACAELAPDTEHRLRLDLHADGHMTLTSAPIQALQTPV
                     GVLLAPDPMDSGDWLLRHKTTDRALYDAAWQQAVVLGAFDMLFFNERDELTEGARSNV
                     FVKLDGRWFTPPVDAGVLPGVMRSVLLEDTQLDAQIATISRQDLARAEGLMICNALRG
                     ALPAQIVSD"
BASE COUNT          669 a          923 c          842 g          699 t
ORIGIN      
        1 tcccatttgc caatcgggcg caagccatga gcgcggtcaa taacatcgag caaacacttg
       61 gcgtgcgccc tagcatctca cggccttgaa tgggtttttg cgtaggccac caagtttgcg
      121 taacactcat cttttggcag gctgagtgct ttggccatga ccttggcagc gtcacgcgta
      181 gacagcaccg ataacaatgc gcccatccag gacagtcgct gtgcgctttg ccaggtttca
      241 tcctgggccc catcctgccc atcatcatct gacaaaccag acgcctggct tgggtgtagc
      301 accaccacgt attcaccttt ttctcggtga tggtcagctt gaacccatgg caccgacgct
      361 tgcaacggca gcgtcacagt ctgctcaaac cgtttggtca gttcgcgaca caggctgact
      421 tgacgttgat caccaaacac ctcgttcaaa tcctcaagca aactgacgat tcgatgaggt
      481 gcctcaaaca tgaccaatga tgattcgacg ctttgccact gccgcaaaac ccgttgtcgt
      541 gccgcctgct tgttcggtaa aaagcccagg aatgtaaacg caggatgttg gtcagtgctc
      601 gcgccgcttg ccatcaaggc cgcaatggcc gcacttggtc caggcacaac caccacctca
      661 aatccagctt ggcgcacatc ctgcaccagt cgcccgcctg ggtcgctaat ggccggtgca
      721 ccggcatccg agatcaaggc aatgcgttgt ccttgtgcca gcctttcaat gatggcggca
      781 cccgcttcac gttcattgtg gcgatgcgct gccaacagcg gggtatcaat gttccaggcc
      841 tgcaacaacg gtcggctcga gcgtgtgtcc tcggccgcaa ttgcgtcaac catgcccaag
      901 acgtaccagg cgcgtagact cagatccatg aggttgccaa tgggcgtggc aacaacatag
      961 agcgctgcct cgggccaatg ttgttgctca aaccgggtag acaaagtttc ccaggctggc
     1021 ggcgctttag tcatagacgg taccggattc acaaaggtgc actcagttta gtgcatcgca
     1081 gcgcagaggc cgtggcatac ttgtcggctt gtctagtctc accgaccaac cgacgtgacg
     1141 ctctcattac catctacatt gcagcccaac gacttgcccg atattgtggt cttactcgat
     1201 gatcaacttg cgcctgccga tgtggcgcgt tcgcgggttt atcgcgggct gaaacactgt
     1261 ctgcgggttg atgaccccga tacactttgg actgccttaa aaaccatgcg acaaggccta
     1321 agcgatggct tgtttgcagt gctattactg gactatgagc tcggtgagct actgcaaggg
     1381 ttgccgccgc gcgcaccttc tgaaacccca ccgctcacac caccacaaac cccaacaccg
     1441 accgatggtt cttttagtca tatcctgttg tttagcgagt gtcagtgcct gacagcgccc
     1501 gaggtcgaca cctggctcga tgaacaatgc caagcgcggg tggtgcatca gacaagtgct
     1561 gcgcaccgac ctgtactgac gggctggcag cccaatgtga ctgaggctga gtttgagcag
     1621 gcgattgcga cgattcacca acgtatcgaa tcaggtgata cctatcaggt caacctgtgc
     1681 tttgccgtca ctgcagcttt aaacggcgat ccagtggcgt tgtaccgcga gttgcgccag
     1741 catcagcgcg tggcctacgg cgcgcttatc ggactacccg atggccgctg ggtgttgtct
     1801 cgttcacccg agcaatttgt atcgctgaac gacggttggt tgcaagctcg tccgatgaaa
     1861 ggcacagctg acgtcaacag cacagttgac ctggcaacag accccaaaaa tcaagcagaa
     1921 aacgtcatga ttgtggacct gttgcgaaac gaccttgggc gtctggccgt gcccggcagc
     1981 gtgagcgtgc cgcaacgttt tgatgtgcaa cgctatggcg atgtcttgca aatgacgtca
     2041 accgtgcaag ccaagccacg tgctactgtt gactgggctg agttgcttaa agcactgttt
     2101 ccctgcggat ctatcaccgg tgcacccaag caccgcacca tgcagatcat ccgcgaactt
     2161 gagaaaggcc ctcgtgggtt gtacaccggt gccatcggct gggtcgaccc tggcgcttct
     2221 gagcagctca atgagttctg cttgagtgtg ccaattcgca ctttgactgt ttcagcgctc
     2281 atgcccgagc gacaccggcg cgtcaggctc ggcgtaggtg ctggcatcac ttacagcagc
     2341 actgcaaggg atgagtgggc ggagtgttcg cttaaagccc ggtttgtcag ccgcctagtt
     2401 aaccaagccc atttatttga gaccatgcgc gcgcatcgcc aatcaggcat tgcatatctt
     2461 gagcgacatc ttgccagact cggcgcctca gcccacgcac tcggtctgcg gtttgacgcg
     2521 acagacgcac gaggccaact gcaatcagcc tgcgccgaac ttgcacctga caccgaacat
     2581 cggctcaggt tggacttaca cgccgatggt cacatgactc tgacatcagc acccatacag
     2641 gcgttgcaaa cgcctgttgg cgttttattg gcgccagatc ctatggactc gggcgattgg
     2701 ttgttacgcc ataaaactac cgatcgcgcc ttgtacgacg ctgcttggca acaagccgtg
     2761 gtgctcggcg catttgatat gctgtttttt aacgagcgcg acgagctcac cgaaggcgcg
     2821 cgcagcaatg tgtttgtaaa actagatggg cgctggttca ccccgcccgt cgatgccggc
     2881 gttttgcccg gcgtgatgcg ctcggtgctg ctcgaggata cgcagcttga tgcccaaatt
     2941 gccactattt cacgtcaaga cctcgcccga gccgaaggct tgatgatttg taatgccttg
     3001 cgcggtgcgc tgccagcaca gatcgtttcc gactaaaaaa cgctgcaccg ccgcacgagc
     3061 gtgagataat gggagctcta ttatttacga tgtgccgtca tgaccttaac ggaacaccta
     3121 cagcagcatt ttg
//
LOCUS       DATBNL010000608         2098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_37156, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000608 DATBNL010000000
VERSION     DATBNL010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37156"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..274)
                     /locus_tag="VIC30_10415"
     CDS             complement(14..274)
                     /locus_tag="VIC30_10415"
                     /inference="COORDINATES: protein motif:HMM:NF025088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HEY7804829.1"
                     /translation="MPTISEFFGIIIRMYYDEHNPPHFHAYYAEHEAMISIESLTVLK
                     GSLPKRAKALVVEWAFNHREALIDAWRLASDHQTLNRIDPLE"
     gene            complement(452..1174)
                     /locus_tag="VIC30_10420"
     CDS             complement(452..1174)
                     /locus_tag="VIC30_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018913096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804830.1"
                     /translation="MSDAKDPSVLKLDGLRKSYNIGLPTELEVLHGLDMTLHTHDFCA
                     LVGPSGSGKSTLLNLIGLLDQPTSGELYLLDQPTRELDDEGRTKIRRESIGFVFQFHH
                     LIEAFSSLENVLMPLMVKGGRPTAEQSDWAMQLLDAVGLKGFERKKPSQLSGGQQQRV
                     AIARALVTRPALLLADEPTGNLDTQTAAHIFELLRRFNREFGCAVLIVTHDPRLSETC
                     DRTITLVDGRFTGDEWHEQARR"
     gene            complement(1092..>2098)
                     /locus_tag="VIC30_10425"
     CDS             complement(1092..>2098)
                     /locus_tag="VIC30_10425"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY7804831.1"
                     /translation="INNWQQVMTALETLPDITAVSPVVSGPGFARRGAATMSVSIIGI
                     DPERYERIITISDDIIEGEFRVSAGNSAIGSKLASDLGVRVGSKLRLEAGGNRTAVVT
                     ITGIFELGVRDLDARFVYLDLKQAQALLGLYGGVTTIDLTVTDIFDASLISDQIDRLT
                     NLKSESWMQINSQLMNALQSQSLSSNLISFFVALSVAFGIASVLAISVTQRTREIGIL
                     RAMGARKEQMLRVFLIQGAVLGLFGSFIGAGIGWGMVWAFNEFGPGLFDISPSVTIIP
                     VSVAIATITGVVAAIAPAWRASRLDPVAAIRYVGRQRSFRSQTRRAAQVLQHWLAHRA
                     "
BASE COUNT          515 a          542 c          557 g          484 t
ORIGIN      
        1 gatgcattct tcattactcc agaggatcga ttctgtttag ggtttgatga tcagaggcca
       61 aacgccaagc atcgattaat gcttccctgt gattgaacgc ccattctact accaaggctt
      121 tggctcgctt tggtaatgat cctttcaaaa cggtgagcga ttcaatcgaa atcattgctt
      181 catgctcggc atagtaggca tgaaagtggg gtgggttgtg ctcatcgtag tacatccgaa
      241 tgatgattcc aaagaactcg ctgatcgttg gcatagacat tccttttaaa gatttaggaa
      301 tgcagaagtc tattggccaa ctggcactgt ttgttgatca ttggcgtgta tttgcccagt
      361 cgggaaaaca cgtattgagc gataaagttc taaaaaacgc gacaccgcat aactgtgcgc
      421 cgagctttga ttctctgaga agatggatgc cttacctgcg cgcttgctcg tgccactcat
      481 caccggtaaa tcgaccatcc actaacgtga tggtgcggtc acatgtctca gatagcctgg
      541 ggtcgtgggt cacgattaag actgcacagc cgaattcgcg gttaaagcgg cgcagcagct
      601 caaagatgtg agccgccgtt tgtgtatcaa ggttgcccgt gggttcatca gctaaaagta
      661 atgctggccg ggtgaccagt gcacgtgcga tggccacacg ctgctgttgg ccgccggaca
      721 attggctggg ttttttgcgt tcaaagcctt ttaagccgac cgcatcgagt aactgcatgg
      781 cccaatcaga ttgctctgct gttggtcgac cgcctttgac catcaagggc atcaagacat
      841 tttctagaga actaaaggct tcgatcaagt ggtgaaactg aaacacgaac ccaatcgact
      901 cacgtcggat tttggtgcga ccttcatcat cgagctcccg agtgggctga tcaagtaagt
      961 agagctcacc actggttggc tggtcgagta ggccaatcag attcagtagc gtacttttgc
     1021 ccgagccaga aggacctacc aatgcacaga agtcatgggt gtgtaatgtc atgtctaggc
     1081 cgtgcagtac ctcaagctcg gtgggcaagc caatgttgta ggacttgcgc agcccgtcga
     1141 gtttgagaac ggaaggatct ttggcgtccg acatagcgaa ttgctgccac tgggtctagt
     1201 cgcgaggcgc gccatgctgg tgcgatggct gccaccacac cggtgatggt ggcaattgcc
     1261 actgagaccg ggatgatggt cactgacggg ctgatatcaa acaagccagg tccaaactca
     1321 ttaaatgccc agaccatgcc ccagccaatg cctgcaccga taaatgaacc gaacaaacct
     1381 agaaccgcgc cctggataag aaacacgcgc aacatttgtt ccttgcgtgc acccatggcc
     1441 cgcaaaatac cgatctctcg agtgcgttgt gtcacgctga tggccagcac actggcaata
     1501 ccaaacgcca cggacagcgc aacaaagaag ctgatcaagt ttgaagacaa gctttgcgac
     1561 tgcagcgcgt tcatgagttg gctgttgatt tgcatccagc tctcagactt tagattggtc
     1621 aggcgatcaa tctgatcgga gatcaggctc gcatcaaaaa tatcggtcac ggtcagatcg
     1681 atggtggtca caccgccgta gagcccaagc aaggcttgcg cctgttttaa gtcgagatag
     1741 acaaagcggg catccaggtc tctgacgccc aactcaaaaa tgcccgtaat cgtcaccact
     1801 gcggtgcgat tgccgccggc ttctagccgc aatttgctcc ccacgcgcac accgagatca
     1861 ctcgcaagct tagagccgat agcgctgttg ccggcgctga cgcgaaactc accttcgatg
     1921 atgtcgtcgc tgatggtgat aatgcgttcg tagcgctcag gatcaatacc aatgatggat
     1981 accgacatgg tggctgcgcc gcgccgcgcg aaaccagggc cagagacaac cggcgagacg
     2041 gccgtgatat caggcaaagt ctcaagtgca gtcatgacct gttgccagtt attgatcg
//
LOCUS       DATBNL010000609         3868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147072, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000609 DATBNL010000000
VERSION     DATBNL010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147072"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VIC30_10430"
     CDS             complement(<1..400)
                     /locus_tag="VIC30_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015014288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804832.1"
                     /translation="MRLERRTRTTWLVLSGAVIGATATVLAISTLLVMWAGAPVGQTY
                     GLLINGAFGSTFAWSETLTRSVPLIFTGLAAAVAFRARLFNIGAEGQLYAGAIAAVAV
                     GGMHGGTGFDIAPAVLFVLMLQRRPQAASTQ"
     gene            complement(397..1890)
                     /locus_tag="VIC30_10435"
     CDS             complement(397..1890)
                     /locus_tag="VIC30_10435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019575591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804833.1"
                     /translation="MQTQPETTPVLRLAGITKRFGALTANDNISLDLAQGEILGLLGE
                     NGAGKSTLMSILFGHYTADEGHIDVHGQTLPAGDPSAALAMGIGMVHQHFALADNLTV
                     LENIVMGTESLWRPSSKRGAARAKAQGVAERFGLSIDTERKISELSVGQRQRVEIIKA
                     LYRGARILILDEPTSVLTPQESEHLFEALQHWVREGLSIIFISHKLGEVLRVCDRVAV
                     LRHGKLVANASTDGVTQSQLAQWMVGHELEAPKRRPGQRQSNEPICDVRFDPARDPHP
                     ESREQLHHVDLSLYPGEIVAIAGVSGNGQTALCDLLFKRFAQAARIPEDRQSVGLVGD
                     LPVWENVASERLKTSLFSRLGWVKQAAAQQYANAVIAAFDVRGADVDTPARNLSGGNM
                     QKLILGRALQLPDGAEPRSPALIIAQQPTWGLDIGAVVFVQDQLIRVRDAGAAVLLVS
                     DDLDEVMTLGDRIAVMHAGVLTEAKPSEQWSRESIGLAMAGSSEAHA"
     gene            complement(1890..2897)
                     /locus_tag="VIC30_10440"
     CDS             complement(1890..2897)
                     /locus_tag="VIC30_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013541662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEY7804834.1"
                     /translation="MRIFSSSRRLALAAGTSLLVLAGASPTSFAQETLKVAAIYTVPF
                     EQQWVSRIHKALLAAEERGEIEYIASENVSNADYERVMREYATQGNELIVGESFAVEA
                     AARKVAKDFPETAFLMGSSGKPQAPNFSVFDNYIQEPAYMTGMIAGGLTESNKIGLVG
                     GFPIPEVNRLMNAFMAGAKEINPEVEFMVTFINSWFDPPKAKEAAFAMIDQGADVLYA
                     ERFGVSDAAKERGILAIGNVVNTQDQYPDTVVASALWNMEPTIDVAVKAVKAGEFSAE
                     NYGKYSEMKYGGSSMAPYGTFENKIPADLKAQVAKRQEEILAETFVVEIDDNQPKSTV
                     R"
     gene            3276..>3868
                     /locus_tag="VIC30_10445"
     CDS             3276..>3868
                     /locus_tag="VIC30_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008333704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding protein"
                     /protein_id="HEY7804835.1"
                     /translation="MKRRMILKQLTVATALAVSGWMPQAMAADDTIKVGILHSLSGTM
                     AISETSLKDVALMTIDEINANGGVMGKKLEPVVVDPASNWPLFAEKARELLTKDKVAV
                     VFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEELEMNVFYTGAAPNQQAIPAVEYLL
                     SEDGGGAKRFVLLGTDYVYPRTTNKILRAFLNEKGIT"
BASE COUNT          867 a         1052 c         1051 g          898 t
ORIGIN      
        1 tttgtgttga tgctgcttgc ggccgccgct gcagcatcaa cacaaacagc acagcggggg
       61 cgatatcaaa cccagtgccg ccgtgcatgc ccccgactgc cacagccgcg atggccccgg
      121 cgtagagctg tccttcggca ccaatattaa agagccgagc tcgaaacgcg acagcagccg
      181 ctagtccagt aaaaattaac ggcactgatc gtgtcagtgt ttcagaccac gcaaaagtcg
      241 agccaaatgc gccgttgatc aaaagcccat aggtttgacc cacgggggca cctgcccaca
      301 tcactagaag cgtgctgata gcaagcaccg ttgccgtggc accgatcaca gcgccactta
      361 aaaccagcca tgtggttcgc gtgcgacgct caagcctcat gcgtgggcct cgctcgaacc
      421 tgccatggcc agaccaatgg attcgcggct ccactgctcg gagggtttag cctcagtcaa
      481 aacgccagca tgcatgacag caatgcggtc acccaaggtc atgacttcgt ctagatcatc
      541 tgacaccaat agcacagcag caccggcatc gcgtacccga atcagttggt cttgtacgaa
      601 gaccaccgca ccaatatcca gaccccacgt gggttgttgc gcgatgatca gtgccggtga
      661 tcggggttct gcaccatcgg gcaattgcag cgcgcgccca agaatgagtt tttgcatatt
      721 accgccagac agattgcggg ctggcgtgtc aacatcagcg ccgcgaacgt cgaatgccgc
      781 gatgacggcg ttggcgtatt gttgcgctgc ggcctgtttg acccagccta agcggctaaa
      841 gagcgaggtt tttaagcgtt cagaagccac gttttcccag acaggcaagt cccccaccaa
      901 acctactgat tgccggtctt ccgggatacg ggcagcctga gcgaagcgtt tgaacaacag
      961 gtcacacaga gcggtttggc cgttgccaga tacgcctgcg atggcgacga tctcgccggg
     1021 gtagagtgac aaatcgacgt gatgtaactg ttcgcgtgat tcggggtgtg ggtcgcgtgc
     1081 cgggtcgaac cgcacgtcac aaatgggttc attgctttgt cgttgtcccg ggcggcgttt
     1141 aggcgcctcg agttcgtggc ccaccatcca ctgggccagt tggctttgcg tcacaccatc
     1201 ggtggacgca ttggccacga gtttgccatg gcgcaatacc gccaccctgt cgcaaacgcg
     1261 tagcacctcg ccaagcttgt ggctaataaa aatgatcgaa agaccctcgc gtacccagtg
     1321 ctgcaaggct tcgaacaagt gttcactttc ttggggcgtg agcaccgatg ttggttcatc
     1381 gagaataaga atgcgcgcac ctcggtaaag cgctttgatg atttcaacgc gttggcgctg
     1441 acctaccgac aactcgctga tcttacgttc ggtatcgatc gacaacccaa aacgctcggc
     1501 cacaccttgg gccttggccc gcgcggcacc acgcttgctg cttgggcgcc acaaagactc
     1561 ggtacccatc acaatgttct caagcacggt caggttgtcg gctaaggcga aatgctgatg
     1621 caccatgcca atacccatgg ccaatgcggc gcttggatcg cctgctggca gcgtttggcc
     1681 gtggacatcg atatgacctt catcagcggt gtagtgacca aacaggatcg acatcagcgt
     1741 ggacttgcca gcgccgttct cgccaagtag cccaaggatt tctccttggg ctagatctag
     1801 cgatatgttg tcgttggccg ttaacgcacc gaagcgttta gtgatccctg caagacgcag
     1861 aaccggcgtt gtttccggtt gtgtctgcat taacgcacgg tggacttggg ttggttgtcg
     1921 tcgatttcaa cgacgaatgt ctcggccaag atttcttcct gacgcttggc cacttgggct
     1981 ttgaggtcag ccgggatttt gttttcaaag gtgccataag gcgccataga agaaccaccg
     2041 tatttcatct cggagtattt gccatagttc tcggcgctga attcgccagc cttgacggct
     2101 ttgaccgcaa catcaatggt gggctccatg ttccatagtg cggaagccac aacggtgtcg
     2161 gggtactggt cttgggtgtt cacgacattg ccaatggcca gaatgccgcg ctctttagcc
     2221 gcatcgctga caccaaaacg ttcggcatag agaacgtcag cgccttgatc aatcatggca
     2281 aaagccgcct ctttggcctt gggtgggtca aaccaactgt taatgaaggt caccatgaac
     2341 tcaacctcag ggttgatctc tttggcgcca gccataaagg cgttcatcaa gcgattaact
     2401 tccggaatcg gaaaaccacc aaccagtccg attttgttgg attcagtcag cccaccagca
     2461 atcataccgg tcatgtaggc aggttcctgg atgtagttgt caaacacact gaagtttggt
     2521 gcctgtggtt tgcccgatga gcccatgaga aatgcggtct caggaaagtc tttggcgact
     2581 ttgcgcgcgg ccgcctcaac agcaaacgac tcacccacaa tcaattcgtt accttgtgtg
     2641 gcgtactcgc gcatcacgcg ctcgtaatcg gcgttcgata cgttctcgct ggcgatgtat
     2701 tcaatctcgc cacgttcttc ggcagccaaa agggctttgt gtatgcggct aacccactgc
     2761 tgctcaaagg gcacggtgta aatcgccgca actttgagtg tttcttgcgc aaagctcgtg
     2821 gggcttgcgc ctgctaatac caaaagactt gtgccggctg ctagcgccaa gcggcgactg
     2881 cttgaaaaaa tacgcatgaa gtaactccat atgacagttc ataaagcatt caagggcaac
     2941 agccgtttgc tggcgatgac tttgctggcg atgaccattc ggcgttgttt gtgacttgtt
     3001 aggaagcaaa tcgcatacca gagccgttga acctgattgc tgcctgaaat ttaacccgtt
     3061 ttaccgcctg cgtgacggtc gcttgcatca atctgaagcg agcggtgcgt caaatcggtg
     3121 catggtttgg gctgcctgca cctgaaatgg gtaaatattg tttatgacgc accgcaaaat
     3181 agctggcatg caatttgcat gagggttatc cggcgagccc tgacagtttt gtcgtgaggg
     3241 ccaaatttga tcagcaactc ataggagcct tactcatgaa gcgtcggatg atacttaagc
     3301 aactcaccgt ggcaacggcc ttggccgttt ctggctggat gccgcaggca atggctgcag
     3361 atgacaccat caaggtcggt attttgcatt ctctgtcagg cacgatggcc atttccgaga
     3421 cgtcccttaa ggatgtcgcg ttgatgacca tcgatgaaat caacgccaat gggggtgtca
     3481 tgggcaaaaa gctcgaaccg gtggtcgtcg atccggcttc caattggcca ctgtttgcag
     3541 agaaagcccg tgaactacta accaaagaca aagtggcggt ggtgtttggt tgctggacct
     3601 cggtgtctcg caagtccgtc ttgcccgtgt ttgaagaact gaatggtctg ctcttttacc
     3661 ctgtgcaata tgagggtgaa gagcttgaga tgaatgtctt ttataccggt gctgcgccaa
     3721 accagcaggc tatcccggct gtcgaatatc tcttaagtga agacggtggt ggtgccaagc
     3781 gttttgtgtt gttgggtacg gactacgtct acccacgcac cactaacaaa atcttgcgtg
     3841 ccttcttaaa cgagaagggc attaccaa
//
LOCUS       DATBNL010000610         4036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96939, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000610 DATBNL010000000
VERSION     DATBNL010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96939"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VIC30_10450"
     CDS             <1..855
                     /locus_tag="VIC30_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018441716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEY7804836.1"
                     /translation="AVVDMRIGKMALRMRAGTDFDIVDPEDDERFNESWNAYYKLRAR
                     HGVTPTIAKAMVRKHNTLIGVLLMQRGDADAMICGIGSRFDNQLKYVDEVVGLKAGVQ
                     TYAAMNVLMLPEQTLFICDTHVNEDPSAEQIADMTIQAAEEVQRFGIEPKVALISHSN
                     FGSRTTASARKMAKARQILLERAPELNVDGEMQADAALSESILKSNFPDTTLNGPANL
                     LIMPNIDTGNVTYNLLKMTGSNGVAIGPILLGAARPVHILTNSSTVRRIINMTALAVV
                     NAQLEQRT"
     gene            complement(989..2284)
                     /locus_tag="VIC30_10455"
     CDS             complement(989..2284)
                     /locus_tag="VIC30_10455"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEY7804837.1"
                     /translation="MKLSDTKATLSFSNGTPSVDLPVYNGTVGPDVIDIRKLYGQTGM
                     FTYDPGFMSTASCQSSITYIDGDKGELLYRGVPIEQLAVNCDFMEVCYLLLNGELPSG
                     DEKAEFSDLVTHHTMVNEQMQFFLRGFRRDAHPMAVLTGLVGGMSAFYHDSTDITNER
                     HRHISAIRLIAKMPTLVAMAYKYSIGQPYIYPQNDLSYTGNFLRMMFATPCEPYVVND
                     VVERALDRIFILHADHEQNASTSTVRLCGSSGTNPFAAIAAGVACLWGPAHGGANEAC
                     LNMLEHLQANGGVEKVGEFMEQVKDKNSGVRLMGFGHRVYKNYDPRAKLMQQTCKEVL
                     SALGLENDPLFKLAMELERIALEDPYFVERKLYPNVDFYSGIVQRAIGIPTALFTAIF
                     ALARTVGWIAQWNEMLSDPEYKIGRPRQLYTGYTAREYK"
     gene            complement(2311..2571)
                     /locus_tag="VIC30_10460"
     CDS             complement(2311..2571)
                     /locus_tag="VIC30_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEY7804838.1"
                     /translation="MGDLTETERTRLRWRARRGLLENDLIITRFLDAHETELTDADIK
                     GLALLLAMGDNDLLDILLSRKEPEGSLDCPEVHDVLRRVRAA"
     gene            complement(2589..3305)
                     /locus_tag="VIC30_10465"
     CDS             complement(2589..3305)
                     /locus_tag="VIC30_10465"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEY7804839.1"
                     /translation="MSTKRVVKFEIYRYDPDKDDRPYMQKLEVELHPTDKMLLDALLR
                     IKADVDDSLALRRSCREGVCGSDAMNINGKNGLACTTNLRELKEPIVLRPLPGLPVIR
                     DLIVDMTHFFNQYHSIKPYLINDAPPPEKERLQSPEAREELDGLYECILCACCSTSCP
                     SFWWNPDKFVGPAGLLQAYRFIADSRDQATAERLDNLEDPYRLFRCHTIMNCVDVCPK
                     GLNPTKAIGKIKEMLVRRTV"
     gene            complement(3325..>4036)
                     /locus_tag="VIC30_10470"
     CDS             complement(3325..>4036)
                     /locus_tag="VIC30_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY7804840.1"
                     /translation="IHYQMGGIPANYHGQVVTWDKGESKVVNGLYAVGEVAAVSVHGA
                     NRLGTNSLLDLIVFGRAAGNHIVESHPERQHAHQPLPQECIDKSLARFEELEARTTGE
                     KTQDVGNAIRETMQEHCGVFRTVDMLNEGCRMIDDLAKQAANIAYGDKSKVFNTARIE
                     ALELQNMIEVARATIHSAAARTESRGAHALAEFPERNDEEWIKHTLWFSDVNRLDYKP
                     VQMKPLTVDSFPPKVRTF"
BASE COUNT          987 a         1122 c         1027 g          900 t
ORIGIN      
        1 gctgtggtgg acatgcgcat cggaaaaatg gcgttacgta tgcgtgcagg cacggacttc
       61 gatattgtgg atccagaaga tgacgagcgc tttaacgaga gttggaatgc ctactacaag
      121 cttcgcgctc gacatggcgt cacaccaacg atcgccaagg ccatggtgcg caaacacaac
      181 acccttatcg gcgtcctact catgcaacgt ggtgacgctg atgccatgat ttgcggtatc
      241 ggcagccgtt ttgataatca gctcaaatat gttgatgagg tcgttggcct aaaggctggc
      301 gttcagacct atgccgccat gaacgtcttg atgctgcctg agcaaacgct gtttatctgc
      361 gacacacacg tcaatgaaga cccctcggcc gaacagatcg ccgacatgac cattcaggcc
      421 gccgaagaag tgcaacgctt tggcattgaa ccaaaggtgg cgctgatctc tcattcgaac
      481 tttggcagtc gcacaacagc ctcagctagg aagatggcaa aggcgcgcca aatcctgctt
      541 gagcgtgcac ccgagctcaa cgtggatggc gaaatgcagg cggacgcggc actatccgaa
      601 tccatcctga agtccaactt cccggacacc accttaaatg gtcctgccaa cctcttgatc
      661 atgcccaaca tcgacacggg aaatgtcacg tacaacctct tgaagatgac cggcagtaat
      721 ggcgtggcca ttggacccat cttgcttggt gccgcacgtc cggtgcacat cttgaccaat
      781 agctcgacag tcagacgcat catcaacatg accgccttgg cagtggttaa cgcgcaactc
      841 gagcaacgca cctagttcgc tcacccaaga acacaaacgc cgctctaaaa gcggcgtttg
      901 tgtttctaag gtactgaact agctgcacaa gcgactagca gcacatgcga ccatgtcagg
      961 taccgtgtct acgggacact gcttctgtct acttgtactc gcgagcggtg tagcccgtgt
     1021 acaactgacg cggacgacca atcttgtact caggatccga caacatctcg ttccattgtg
     1081 caatccagcc aaccgtgcgt gcgagcgcaa aaatcgcggt aaacaatgct gtcggaatac
     1141 caatggcgcg ctgcacaatg ccggagtaaa agtcgacgtt gggatacaac ttacgttcga
     1201 caaagtaagg atcttcaagc gcaatacgct cgagttccat ggcgagctta aacaacggat
     1261 cgttctcaag accaagggcg ctcaacactt ccttgcaggt ctgttgcatc aacttggcac
     1321 gcggatcgta gttcttgtac acacgatgcc caaagcccat caaacgcacg cctgagttct
     1381 tgtctttaac ctgctccatg aactcaccta ctttctcaac gccgccattg gcttgcaggt
     1441 gttcgagcat attcaagcag gcctcattag cgcccccgtg tgctgggccc cacagacacg
     1501 ccacaccagc agcaatcgct gcaaaggggt tggtgcccga tgagccgcac aaacgcacgg
     1561 ttgaggttga tgcgttttgt tcgtggtccg catgcaaaat aaagatgcga tcgagcgcgc
     1621 gctcaaccac gtcattgaca acgtaaggct cgcacggtgt ggcaaacatc atgcgcaaga
     1681 aattacctgt atagctcagg tcattttgcg ggtagatata gggctgacca attgaatact
     1741 tataggccat ggccaccaat gtcggcatct tggcgatcaa acggattgca gaaatatgac
     1801 gatgccgctc gttggtgata tcggtcgagt cgtgatagaa cgccgacatg ccaccaacca
     1861 agcctgtcaa aacagccatc gggtgggcat cacgacggaa accacgcaag aaaaactgca
     1921 tctgctcgtt gaccatggtg tggtgtgtca ccaaatcgct gaactctgct ttttcatctc
     1981 cagatggcaa ctcgccattg agcaggagat agcagacttc catgaagtca caattgactg
     2041 caagctgttc gatgggaacg ccgcgataca acaactcccc tttgtcaccg tcaatatacg
     2101 taatcgatga ctggcatgat gccgtggaca taaagccagg gtcataagta aacataccgg
     2161 tttgaccata caacttgcgg atgtcgatca catcgggacc gacagtgccg ttatagaccg
     2221 gtaaatcgac agatggggtg ccgttagaga acgacagcgt cgccttggtg tcagacagtt
     2281 tcatttaatc ttcctcgtgt tacacgaggc tcacgctgca cggactcgtc ttagcacatc
     2341 gtgaacctca gggcagtcaa gcgagccctc aggctctttg cgagacagca aaatgtccaa
     2401 taggtcgtta tcacccatcg cgagcaacaa tgccaaccct ttaatgtcag catcggtgag
     2461 ctcggtctcg tgagcatcca gaaaacgcgt gatgatcagg tcgttttcca gcaacccccg
     2521 gcgggcgcgc cagcgcagcc gggttctctc tgtttctgtc aggtcaccca tttgcgcagc
     2581 agcctcgact ataccgtacg acgaaccagc atttctttaa tcttgccgat tgccttggtg
     2641 gggttcaacc ctttcgggca tacatccaca cagttcatga tggtgtggca gcgaaataag
     2701 cggtacggat cctcgaggtt gtcgagtcgc tcagctgttg cctgatcgcg gctatcagca
     2761 atgaagcgat aggcctgtaa cagaccggct gggccaacga acttatccgg gttccaccag
     2821 aaagacggac acgatgttga acaacaggca cacagaatgc actcatagag gccgtctagc
     2881 tcttcgcgcg cctcaggcga ctgcaaacgc tccttctctg gaggcggcgc gtcattgatg
     2941 aggtaaggct taatcgagtg gtattgattg aagaagtggg tcatatccac aatcaaatct
     3001 cgaatgacgg gtaagcccgg caacggacgc aacacgatgg gctctttcag ttcacgcaag
     3061 ttggtggtgc acgccagacc atttttgccg ttgatgttca tggcgtcaga gccacagacg
     3121 ccttctcggc atgaacgacg cagtgccaag ctgtcatcga cgtctgcctt gatgcgaagc
     3181 aacgcatcga gcaacatctt gtcagtcggg tgcaactcca cttcaagttt ctgcatataa
     3241 ggacgatcgt ctttgtccgg atcgtaacga tagatctcaa atttcacgac gcgttttgtg
     3301 ctcatgatgt caaccttttc tcaatcagaa tgtacggact ttgggcggga atgaatcgac
     3361 cgtcagcggc ttcatctgca ccggtttgta gtcgagtcga ttgacgtcag agaaccacag
     3421 tgtgtgcttg atccactctt catcgttgcg ctcggggaac tcggcaagcg cgtgcgcacc
     3481 acgactttcc gttcgagcag ctgctgagtg aatcgtggca cgtgccacct caatcatgtt
     3541 ttgtagctcg agtgcctcga tgcgagcggt gttaaacacc ttagacttgt caccgtaagc
     3601 aatgttggca gcctgcttag ccaagtcatc aatcatccgg caaccttcgt tgagcatgtc
     3661 caccgtacgg aaaacgccgc aatgctcttg catcgtctca cgaatggcat tgccaacatc
     3721 ttgcgttttc tcacccgtgg tgcgtgcctc aagctcctca aagcgagcta gcgacttgtc
     3781 aatgcactct tgcggcaggg gctggtgcgc atgctggcgc tcaggatgcg actcaacgat
     3841 gtggttaccc gcagcacgac caaacacgat caggtcgagc aaggagttcg tgcccaagcg
     3901 gttagcaccg tgtacagaca ccgccgcaac ctcaccaacg gcatacaggc cgttgaccac
     3961 tttagactca cccttatccc aagtaaccac ttgaccgtga tagttggcag gtatgccacc
     4021 catctggtag tgaatc
//
LOCUS       DATBNL010000611         1737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57115, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000611 DATBNL010000000
VERSION     DATBNL010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57115"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..824
                     /locus_tag="VIC30_10475"
     CDS             240..824
                     /locus_tag="VIC30_10475"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY7804841.1"
                     /translation="MAQQASEHDIGLWLERLRRGDRAAAEAIYRGFYGKVTGFIRVQI
                     ADEAAVEEIVDDTFMVLFENPGSFDGRSRFTTWLLGIAKRKSADWWRAHVREPSADAQ
                     DDSDMLNHLEDPAWPALEHLEQAQVSTIVRRCIERLPPTQREALYWVFFEALSLVEVA
                     KQLDCADGTIKSRLFHARLKMADCVKRRLNTGAI"
     gene            826..1443
                     /locus_tag="VIC30_10480"
     CDS             826..1443
                     /locus_tag="VIC30_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804842.1"
                     /translation="MSESPISRERFDLLLPFYLNGTLEPDEQQRMYQYVQTHPEVEHA
                     LKFAEQLQRVVVADGQTAQPTQYRVDRLLARTWPQQYGAPDGGVVQPASFGWSWLMPF
                     VSGMAVVLLVWGFQGVPTGSLHTDMLDGRADIRVALVPGVKANDPALLEQLQAFNSEV
                     VGHEQIDGRNMVEIDLSRRSQQQHALIEALTASGQIDGHVLLASQ"
     gene            complement(1455..>1737)
                     /locus_tag="VIC30_10485"
     CDS             complement(1455..>1737)
                     /locus_tag="VIC30_10485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804843.1"
                     /translation="VLTKPGYGMFVETRTHAKPMLYVAREQWPETNCLVQWASTHTQA
                     RQLTPTQLATGQFVAEMIDVLTAPAMSPVHFAGADIAARTWMNTTFGCR"
BASE COUNT          386 a          427 c          508 g          416 t
ORIGIN      
        1 gttcacgtta ttggagcagg ccgatgaggt catcattgag ctaccaggca atgagcagac
       61 ttaccggctc gacggtgtaa gtgccagcga tctgtcactg gctaacatcg aagcgctcga
      121 tgcatcaacc ttgcagcaat ggggtgactt tgtcggttaa gtttggcttt tgagtgacat
      181 gtgctttgca tcaacgcgcg ctatagtggc ttttttaaaa acggctagat gcaaggcaca
      241 tggcgcaaca agctagcgaa cacgacatcg gattatggtt agagcggcta cgacgcggtg
      301 atcgcgccgc agctgaagct atctaccgcg gtttttacgg caaggtcacc gggtttattc
      361 gagtgcagat cgccgatgag gcggcggtag aagaaattgt ggacgatact ttcatggtct
      421 tgttcgagaa ccctggcagc ttcgatggac ggtcccgctt cacaacgtgg ttacttggca
      481 ttgccaaacg taaaagcgcg gattggtggc gagcgcatgt gcgcgaaccg agtgccgatg
      541 ctcaagatga cagcgacatg cttaaccatc ttgaagaccc agcttggccc gcgcttgagc
      601 acttggaaca agcgcaggta tcaacgatcg tacgacgctg tatcgagcgg ctgccgccga
      661 cgcagcgtga agcgctgtat tgggtgtttt ttgaggcgct gtctttagta gaggttgcca
      721 agcaacttga ctgtgccgac gggaccatta aaagtaggct gtttcatgcc agattaaaaa
      781 tggcagactg tgtcaaacgt cgtttaaata ctggtgctat ctgagatgag cgaatcaccg
      841 atctcgcgcg agcgttttga cttactactg ccgttttatc taaacggtac gctcgagccc
      901 gacgagcagc aacggatgta tcagtatgtg caaacccacc cagaggtcga acacgccttg
      961 aagtttgccg agcagttaca gcgggtggtg gttgctgatg gtcaaacagc gcagcccacg
     1021 caatatcggg tggatcgcct gttagcgcgc acttggccac aacagtatgg cgcgccagat
     1081 ggaggtgttg tgcagccggc gtcattcggt tggtcttggt tgatgccgtt tgtctcaggc
     1141 atggcggtcg ttttactggt ttgggggttt caaggggtac ctacgggttc tttgcacacc
     1201 gatatgctag atgggcgagc cgacattcgc gtcgcacttg taccaggggt caaggcaaat
     1261 gaccctgcct tgcttgagca actgcaggcc tttaatagcg aggtggtagg tcacgagcaa
     1321 atcgatggtc gcaacatggt tgaaattgat ttgagtcgcc gttctcagca gcaacatgcc
     1381 ctaatcgagg cgctcactgc cagtggtcaa attgatggtc acgtgctgct tgccagtcaa
     1441 tagcgtcgac tacctcacct gcacccaaat gtcgtattca tccaagtcct agcagcgatg
     1501 tctgcaccag caaagtgaac cggcgacatc gcaggcgcgg ttagcacgtc aatcatttca
     1561 gcgacgaatt gacccgtggc cagttgtgtt ggcgttaatt ggcgggcctg cgtatgggtg
     1621 cttgcccatt gaaccagaca attggtctcg ggccattgct cgcgggccac gtacagcatg
     1681 ggtttggcgt gcgtgcgtgt ttcaacaaac atcccataac cgggtttggt caggacc
//
LOCUS       DATBNL010000612         1858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_96943, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000612 DATBNL010000000
VERSION     DATBNL010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96943"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /locus_tag="VIC30_10490"
     CDS             <1..1029
                     /locus_tag="VIC30_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017406234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEY7804844.1"
                     /translation="QLIRFNFWLDPVFDEIIDANPAIVQTPCRFDDPNEQSWAVMARA
                     HAYHICAARDEVPTQWQVTDTLLDKAPNLLCVSSSGAGFDPIDVAACTKHGVIVVNQS
                     GCNANSVAEHAIGLLLSVKHRIAESDRVMRAARYTTREDLMGRDITGLTIGIVGVGNI
                     GRRVAQLARAFDMRVLGYDPYVEPAELVRRGVEPVSLDELLQDSDVVTLHCPRNEETL
                     GLFDADRFTQMRQGAVFISTARGGIHDEAALAKALEDGHLAGAGLDVWTVEPPAADNP
                     LLTMNNVVATYHTAGVTHEARRNAARMGAQQLCDLFASGNQPPRLINPEAWPLFQQRY
                     AQTFGSGG"
     gene            1341..>1858
                     /locus_tag="VIC30_10495"
     CDS             1341..>1858
                     /locus_tag="VIC30_10495"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY7804845.1"
                     /translation="MSNSDFLDNIYQVKSGDPMRQAYDQWADSYDADIEQKQYRTPAR
                     IAQALARHLSDKAAPILDFACGTGLSGQALHAAGFTSIDGVDLSEKMLSKARDKGVYR
                     SLTPCQADAPFDAVSEAHRAITATGAIGAGAAPIECLSQAIDHLPSDGLLCVSLNDHT
                     LEDPRYEALIADA"
BASE COUNT          436 a          544 c          483 g          395 t
ORIGIN      
        1 caactcatcc ggttcaattt ctggctcgat ccagtgtttg atgaaatcat tgatgcaaat
       61 ccagccattg ttcaaacccc atgccggttt gatgacccta acgagcaatc gtgggcggtg
      121 atggcccgtg cccatgctta ccatatctgt gctgcccgcg atgaggtacc aacccaatgg
      181 caagtcaccg atacgctgtt agacaaagca ccgaacttgc tttgcgtctc gagttccggc
      241 gcgggctttg accccatcga cgtggcagct tgcactaagc acggtgtgat tgtagtgaac
      301 caaagcggtt gcaacgccaa ttcagtggcc gagcatgcca ttgggctatt gctctctgtc
      361 aaacaccgca tcgctgaatc cgatcgggtc atgcgcgcag cgcgctatac gactagagag
      421 gatctgatgg gccgtgacat cacgggactg accattggca tcgttggcgt tggcaacatt
      481 ggtcggcgcg tggcgcaact ggctcgcgcg tttgacatgc gggtactggg ctacgaccct
      541 tatgtcgaac cagccgaact cgttcgccgc ggagtggaac ctgtatcact ggatgaactt
      601 ctacaagata gtgacgtcgt caccctgcac tgtccgcgca atgaggagac gcttggtctg
      661 tttgacgccg accgatttac gcaaatgcgc caaggtgcgg tgtttatctc aaccgcccgt
      721 ggtggtattc acgacgaggc cgcacttgcc aaggcgctgg aggacggaca tctggcaggc
      781 gctggcctag atgtctggac cgtagaacca cccgcagccg acaacccgct gttgaccatg
      841 aacaatgtgg tggccacgta tcacactgct ggtgtcactc atgaggctag acgcaacgcc
      901 gcacgcatgg gtgcccaaca actttgtgac ttgtttgcat caggcaacca accgccacgg
      961 ttaatcaacc ccgaggcctg gcctttgttt caacaacgct atgcccagac gtttggctct
     1021 ggcggttaaa tcagcacaca gggcggcata caaggtcagc acacagggcg taaggcacca
     1081 ggcataaagc atcagactgc caagcacaca catatgtctg atgtgaagag ctatttttcg
     1141 gtggtggaac caacttcaac aacgtggttg ctccactaca aaactcgcct ctagactaag
     1201 gtttattgag acattctcgg cggtacagtg atagctgcca accaacgcac agccgcgttt
     1261 gaagcaaaac ttgtaggcca acgtatgcaa accacagcat gcatagcgcc tgccccactc
     1321 ttgtcacaaa aggagactac atgagtaact cagacttctt ggacaacatc taccaagtca
     1381 aatccggcga tccgatgcgc caagcctatg atcaatgggc tgacagctac gatgctgata
     1441 tcgaacaaaa acaataccgc acccctgccc gcattgctca ggcgctcgcg cgccacctct
     1501 cggacaaagc cgcccccatc ctggacttcg cctgtggcac aggactatca ggccaagccc
     1561 tgcatgcggc tggcttcact tctattgatg gcgttgacct ttcagaaaag atgctcagca
     1621 aggctcgcga caaaggcgtc tatcgcagcc tcaccccttg ccaagcagat gcaccgtttg
     1681 atgccgtgag tgaagcgcac cgggccatta ccgccacggg cgccattggt gcgggagctg
     1741 cacccatcga atgcttgtcg caggccattg atcacctgcc ttctgacggt ctgctgtgtg
     1801 tatcactaaa cgatcacacg ctagaagacc ctcggtatga agcactgatt gccgatgc
//
LOCUS       DATBNL010000613         2896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_116715, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000613 DATBNL010000000
VERSION     DATBNL010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116715"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..972
                     /locus_tag="VIC30_10500"
     CDS             19..972
                     /locus_tag="VIC30_10500"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018025584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEY7804846.1"
                     /translation="MRNPQLNRHGELTHLITTEGIPRDILTHILDTAQTFVPLAERDV
                     KKVPLLRGKSVFNLFFENSTRTRTTFEIAATRLSADVFNLNINASSASKGETLLDTIA
                     NLTAMQADIFVVRHEASGAPYLIARHVPPEVHVVNAGDGRHAHPTQALLDMYTIRHFK
                     HDFTNLTVAIVGDVLHSRVARSNIHALTTLGVPEVRAIGPLTLLPGSLDQMGVQAYTD
                     RNEGLRDVDVIIMLRLQNERMRGALLPSSQEYFKHYGLTAEKLALAKPDAIVMHPGPM
                     NRGVEIDSAVADGPQSVILNQVTFGIAVRMAVMSIVAGAST"
     gene            969..2264
                     /locus_tag="VIC30_10505"
     CDS             969..2264
                     /locus_tag="VIC30_10505"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014897896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEY7804847.1"
                     /translation="MRLHIKGARLIDPGTGTDQLADLWVAGGRIAAVGQAPEAFEVQQ
                     TLDYSGLCLMPGLIDLAARLREPGQEHRAMLDSEITAALAGGITRLVLPPDTDPPLDE
                     PGLVEMLKHRARQIDRVNLFPLGAMTVGLNGEVITEMGALSNAGCVGFAQADRPVFDT
                     TVLLRAMQYARSFGFALWLRPMDPWLSKGVAASGAYAARLGLSGVPVQAETIALHTLF
                     ELQRATGVRLHLCRISSAHGVALVREAKAQGLPVTCDTTINHAHLTDVDIGYYDTHYR
                     LDPPLRGQRDRDALRAALADGTIDALCSDHTPVDDDGKQMPFAEAEAGATGLELLLSL
                     ALKWAQEDKVPLAVALARVSAGPAEILRAASPAMPPIGSLAVGAPADLCVFDPTEYWP
                     VHRDSLNSQSRHTPFLGMELPGRVKATLMRGRVVWGLPG"
     gene            2261..>2896
                     /locus_tag="VIC30_10510"
     CDS             2261..>2896
                     /locus_tag="VIC30_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY7804848.1"
                     /translation="MRLLLFALRAPLVALWVLCGLLTIGLIFVWVGHRGRLALKKHWS
                     RVLLLLCGVRTLIDGQPVATGAVLWAVNHVSWLDIFVLNVVRPTAFVAKQEIRHWPLI
                     GWLAAGADTIFIERGYRHAVQRVGQAMKLRFEREQAVGLFPEGTTSDGFDVLSFYGNL
                     FEPSRTSGVVVQPVALRYYHHKQRSAYAAFVGEETLIANLWRVLGTTGVSVE"
BASE COUNT          559 a          740 c          881 g          716 t
ORIGIN      
        1 tgagcccaag gaatcgtgat gcgtaatccc cagttaaacc gccatggcga gttgacccat
       61 ctaatcacga ccgaagggat tccgcgcgac atattgacgc atatcctcga tacggcgcaa
      121 acgtttgtac cattggctga gcgcgatgtg aagaaagtgc cattgttgcg cggcaagagt
      181 gtctttaacc tgttctttga gaactcaaca cgcacccgca ccacttttga gattgcggca
      241 acgcgtttgt cggccgatgt ctttaatctg aacatcaacg cgtcctcagc atctaaaggc
      301 gagaccttac ttgataccat cgctaaccta acggccatgc aggccgatat ttttgtggtc
      361 aggcatgagg ccagtggcgc gccctatctc attgcgcgcc atgtgccgcc cgaggtacat
      421 gtggtcaatg ctggcgacgg tcgtcatgcg catcccacgc aagccttgct tgacatgtac
      481 accatccgtc atttcaagca tgacttcacc aaccttaccg ttgccattgt gggcgatgtg
      541 ctgcattcac gggtggcgcg ctcaaatatt cacgccttga ccacgttagg cgtgccagaa
      601 gtgcgtgcca tcggtccgct aacactgctg ccgggaagct tagatcagat gggtgtgcag
      661 gcctacaccg acaggaatga gggcttgcgc gacgttgatg tcatcatcat gttgcgtcta
      721 caaaatgaac gtatgcgtgg tgctttgttg ccatcgtccc aagagtattt caagcattat
      781 gggttgactg cagagaagtt ggcgttggcc aaaccagacg cgattgtgat gcacccagga
      841 cccatgaacc ggggtgtgga aattgattcg gctgtcgccg atggtccgca atcggtgata
      901 ttgaatcaag tcacatttgg tattgcggtt cgtatggccg ttatgagcat tgtggcagga
      961 gcgtcgacgt gagactgcat atcaagggtg cccgcctgat tgatccgggc acagggacag
     1021 accagcttgc cgatctttgg gtcgctggtg gccgtatcgc tgcggttggc caagcgcccg
     1081 aggcgtttga ggtgcaacaa accttggatt actccgggct ttgtttgatg ccgggtctta
     1141 ttgaccttgc agcgcgtttg cgtgaaccgg gtcaagaaca ccgggcaatg ctggactcgg
     1201 aaataacagc ggctttagcc ggtggtatca cccgtcttgt gttgccaccg gacaccgacc
     1261 cgccgctaga tgagccgggt ttggttgaaa tgctcaagca ccgtgctcgg caaattgatc
     1321 gggtcaatct gttcccactt ggtgccatga ccgtggggct gaacggcgaa gtcatcactg
     1381 aaatgggcgc gttgtccaac gccggctgtg tgggctttgc tcaagctgat cgacccgtgt
     1441 ttgacaccac cgtgttgcta cgtgccatgc aatacgcgcg gtcattcggg tttgccttgt
     1501 ggttacgccc catggatcct tggttgtcta aaggtgtggc agcaagcggt gcctatgccg
     1561 ctagacttgg actgtctgga gtgccggtgc aagccgaaac cattgcatta cacacgctgt
     1621 ttgagttgca gcgcgctacc ggtgttcgcc tgcacctgtg tcgcatcagc tcagcgcatg
     1681 gcgtggcttt ggttcgcgaa gccaaagccc aagggctacc ggtgacgtgc gacaccacga
     1741 ttaaccatgc ccatttgacc gatgtagata ttggctatta cgacacccac tatcgtttgg
     1801 acccgccatt gcgcggccaa cgtgatcggg acgcgctacg tgcggcgttg gctgacggta
     1861 cgattgatgc actgtgttcg gaccacacac cggttgacga tgatggcaag caaatgccgt
     1921 ttgcagaggc cgaggctggc gccacgggtc tggagctgtt gcttagtctg gcgcttaaat
     1981 gggcgcaaga agacaaagtg ccattggccg tggcgctagc cagagtcagt gcgggtcctg
     2041 ctgagatctt gcgtgcagct tcacctgcca tgccaccgat tgggtcgcta gctgtcggcg
     2101 cgcctgctga tctttgcgtg ttcgatccga cagagtattg gccagtgcat cgtgacagct
     2161 taaatagcca gagtcgtcac acaccatttt tagggatgga gctgccaggc cgggtgaaag
     2221 ccacactcat gcgcgggcgt gtcgtgtggg ggttgcctgg gtgaggctgc tgctgtttgc
     2281 gctgcgtgcg ccactggtgg ccttgtgggt gctgtgtggg ctgctgacca ttgggttgat
     2341 tttcgtttgg gttggccacc gggggcgact agccttaaag aagcattggt cgcgtgtctt
     2401 gctccttttg tgtggtgtgc gaacgctgat tgatggccag cccgtggcca ctggtgctgt
     2461 tctatgggca gtgaatcacg tctcctggct tgatattttt gtgttgaatg tggttagacc
     2521 aacggcgttt gtggccaaac aagagatccg gcactggccg ctgattggtt ggttggctgc
     2581 tggcgcggac acgattttta tcgaacgtgg ttatcggcat gccgtgcagc gagtaggaca
     2641 ggccatgaag ctgcgctttg agcgggagca agccgtggga ttgtttcccg agggcacgac
     2701 atcggatggg tttgatgtgt tgtcttttta tggcaattta tttgagccat cgcgcacgtc
     2761 cggcgtggtt gtacaaccag tggccttgcg ttactaccat cacaagcaac gtagtgcgta
     2821 tgcggcgttc gttggcgaag agaccctaat tgcgaacttg tggcgtgtgc ttggcaccac
     2881 tggtgtgagc gtcgag
//
LOCUS       DATBNL010000614         3732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167170, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000614 DATBNL010000000
VERSION     DATBNL010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167170"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..89
                     /locus_tag="VIC30_10515"
     CDS             <1..89
                     /locus_tag="VIC30_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018436703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY7804849.1"
                     /translation="KIGDGKIFVAALEEVVRIRTGESGPDAL"
     gene            107..1351
                     /locus_tag="VIC30_10520"
     CDS             107..1351
                     /locus_tag="VIC30_10520"
                     /inference="COORDINATES: protein motif:HMM:TIGR03644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEY7804850.1"
                     /translation="MNTEIIDAQFFEFGYALDTFYFLVCGALVMWMAAGFSMLEAGLV
                     RAKNTTEILTKNVLLYAIACTMYMIVGYSIMYDGGIFLAGITGDGVADEAAYAPSADF
                     FFQVVFVATAMSIVSGAVAERMKLWAFALFAIVMTGFIYPMEGSWTWGGASVFGMYNL
                     GDIGFLDFAGSGIVHLAGAAAALAGVILLGARKGKYGANGEIRAIPGSNLPLATLGTF
                     VLWLGWFGFNGGSVLATASVESANAVAVVFMNTNAAAAGGVIAALIVAKLMFGKADLT
                     MILNGALAGLVAITAGPDTPSPLAATLIGAVGGVLVVFSIIALDKLKIDDPVGAISVH
                     GVVGIWGLLAVPITNSDASFFAQIVGALTIFVWVFVASLIVWGILKAIMGIRVSEEDE
                     YQGVDIAECGMEAYPEFTNSSN"
     gene            complement(1471..3159)
                     /gene="ptsP"
                     /locus_tag="VIC30_10525"
     CDS             complement(1471..3159)
                     /gene="ptsP"
                     /locus_tag="VIC30_10525"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEY7804851.1"
                     /translation="MASGYAMGRAVVMGAAALEVEHYRVADQAVEQEADRLKRALETT
                     YAELAELANTLPIDAPRELSAMLSVHQLLLEDPLLADESLTLVRERHYNAEWALTTQG
                     QLLGEQFSTMEDEYLRERAADVRQVVERVLHTLRGSQVMSALDGVSDSGDPLIVVARD
                     ISPADMIRLRGARFAGFVTDLGGPTSHTAIVARSMGVPAVVALGNVRQVARDGDFLVV
                     DGETGAVLINPTQEQINSYKQLATDYAESRQALLSIKDIACETLDGIRVGLHANIEMP
                     DEVALALSQGADGIGLYRSEFLFMGRDELPTEEEQFDAYRSVAHDMGGRPVTIRTLDI
                     GADKALDGEATVATNPALGQRAIRYCLARPSLFAAQLRAIFRASAFGKVRILIPMITS
                     LHEVQALYEVIGSVKRELSNQGIAYDEDVSIGAMVEVPAMAIAIEPFAKAFDFLSIGT
                     NDLIQYTLGIDRADSEVASLYDPLHPAVLRLIAGTINAGQRLGKSVSVCGEMAGDAKM
                     TRLLLGMGLTEFSMHPRQLLDVKQEILAAHTNALRTKVAAALNRAETIEPGALR"
     gene            complement(3242..3511)
                     /locus_tag="VIC30_10530"
     CDS             complement(3242..3511)
                     /locus_tag="VIC30_10530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003812598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEY7804852.1"
                     /translation="MPQIELEVSNKLGLHARAAAKLTKLAGQFTSDVFISKDARRVNA
                     KSIMGVMMLAAGKGTTVEIDAQGADAEQALEAIKELFDDKFGEGE"
BASE COUNT          832 a         1009 c          992 g          899 t
ORIGIN      
        1 gcaagatcgg cgacggcaag atctttgtcg ccgcacttga ggaagtggtt cggattcgca
       61 ccggcgaatc tggtcctgat gccctgtaac caaaaggaaa atcacgatga ataccgaaat
      121 aattgacgcg caattttttg agtttggcta cgcgctcgac acattctatt tcctggtctg
      181 cggggcattg gtgatgtgga tggcagctgg cttctcaatg cttgaggctg gcttggttcg
      241 tgcaaaaaac accaccgaaa tcctaaccaa aaatgttttg ctttatgcaa tcgcctgcac
      301 gatgtacatg attgttggtt atagcatcat gtacgacgga ggcattttct tggctggcat
      361 taccggcgac ggcgttgccg acgaggcggc ctacgcccca tcggctgact ttttcttcca
      421 ggtcgtgttc gtggcaactg ccatgtccat cgtctctggt gccgtggctg agcgcatgaa
      481 gctttgggcc tttgcgttgt tcgcgattgt catgaccggc tttatttacc ccatggaagg
      541 ctcatggact tggggcggtg catccgtgtt tggcatgtac aacctgggcg acatcggctt
      601 tctggacttt gcgggttctg gcattgttca cttagccggt gctgccgctg cccttgctgg
      661 tgtcattttg ctcggtgcac gtaaaggtaa gtatggtgcc aacggtgaaa tccgggccat
      721 tccaggctcc aacttgccac tagccacttt aggtactttt gtcttgtggc ttggttggtt
      781 cggttttaac ggtggttcag tgctggccac ggcgtcagtt gaatcagcca atgcggtcgc
      841 tgtggtgttt atgaacacca acgctgctgc tgccggtggt gtgattgctg cgctcatcgt
      901 cgctaagctg atgtttggca aggccgattt gacgatgatt cttaacggcg cacttgctgg
      961 tctggtggca atcactgctg gcccagacac accctcgcct ttggctgcaa cgctgatcgg
     1021 tgccgtgggt ggcgtgctgg tggtgttctc gatcatcgca ctcgataagc tgaagatcga
     1081 cgatccagtt ggtgctatct ccgttcacgg cgtggtcggt atctggggct tgttagctgt
     1141 gcccatcacc aactcagatg ctagcttctt tgctcagatc gttggcgcgc tgaccatttt
     1201 tgtgtgggtg ttcgtagcca gcttgatcgt ttggggcatt ctgaaagcga tcatgggtat
     1261 ccgtgttagc gaagaggatg agtaccaagg cgttgacatt gctgaatgcg ggatggaagc
     1321 ctatcctgag ttcaccaata gcagcaacta agtagcaagc aatctcacta actgtgccag
     1381 ttaaaccaag ggccgcgaaa agcggccctt ggtttttgct gttgaacaaa aatactaacg
     1441 tgcgctagaa gtgcggatgc ataatactat ctaacgcaac gccccaggct caatggtttc
     1501 agcgcgattc aatgccgcgg ctactttggt tcgcagcgcg ttagtgtgcg ctgcgaggat
     1561 ttcctgttta acatctagca actgccgtgg gtgcattgaa aactcagtca gccccatacc
     1621 gagcaacaaa cgggtcatct tagcgtcgcc ggccatttcc ccgcagactg agacggattt
     1681 gcccaagcgt tgaccagcat tgatggtgcc ggcaattaaa cgtaaaacgg ccggatgcaa
     1741 cggatcatag agagacgcga cttccgaatc ggctcggtca atacccaatg tgtattgaat
     1801 cagatcattg gtgccaatcg acagaaaatc aaacgctttg gcaaagggtt caatggcgat
     1861 cgccatggcc ggcacctcaa ccatggcacc aatagatacg tcctcatcgt aggcaatacc
     1921 ttgattggaa agctctcgct tgaccgatcc gataacctca tacaaagcct gcacctcgtg
     1981 caggcttgtg atcatgggta ttaagatccg tactttgcca aacgccgatg cacggaagat
     2041 ggcacgcaat tgggctgcga ataaagaggg tcgagccaaa caataacgaa tagcgcgctg
     2101 cccgagcgct ggattggttg ccacagtggc ctcaccatca agggccttgt cggcgccaat
     2161 atcgagcgta cggatcgtca caggtcgccc acccatatca tgggcaacac tgcgataggc
     2221 atcgaactgt tcctcttcgg taggcaactc atcgcgcccc atgaataaaa actcactgcg
     2281 atataaacca atcccatcag caccttggct caaggccaat gcaacttcgt cgggcatttc
     2341 aatattggca tgcaagccga ctcgaatccc gtcaagtgtc tcgcaggcga tgtctttgat
     2401 actcagaagt gcctggcgcg attctgcata gtcagtagcc agttgcttgt agctattaat
     2461 ttgttcctgg gtcgggttaa tcaggacggc acctgtttcg ccatcgacca ctaaaaaatc
     2521 gccatcacga gccacctgac gcacattgcc caaagcaacg acggctggca cgcccatact
     2581 acgtgccacg atggccgtat gtgaggtggg accacccaag tcagtgacaa acccagcaaa
     2641 gcgcgcaccg cgcaaacgaa tcatgtcagc aggtgaaata tcgcgagcca ccacaatcaa
     2701 ggggtcacct gagtcagaga ccccatcaag tgcagacatc acttggctgc cgcgcagcgt
     2761 gtgcaacaca cgctcaacaa cttggcgaac atcagcggcg cgctctctta agtattcatc
     2821 ctccatggtg gagaattgct caccgagaag ctggccttgc gtggttaacg cccattcagc
     2881 gttgtagtgg cgctctcgca ccagggttag gctctcatcg gcaagtagcg ggtcttcgag
     2941 cagtagctga tgcacgctaa gcatggcgga caactctcta ggcgcatcaa tgggtagggt
     3001 attggcgagc tcagccaact cggcataagt cgtctccaaa gcacgtttaa ggcgatctgc
     3061 ttcttgctcg acggcttgat cagccactcg gtagtgctca acctcaaggg cggctgcacc
     3121 catgaccact gcacgcccca tggcataacc actggccaca gcgcgcccat acaggcaaat
     3181 aagggagtca gccggcaacg cgctcaaact ggcgttggcg ttggtgctgg cattggtgtt
     3241 gtcattcgcc ttcgccgaac ttgtcatcaa acaactcctt gatggcctca agcgcctgct
     3301 cagcgtctgc cccctgagca tcgatctcga cagttgtacc cttgcctgcc gcgagcatca
     3361 tgacacccat gatgcttttt gcgttgaccc gacgtgcgtc tttggagata aacacatcgc
     3421 tcgtgaattg cccggcgagc ttggtcaatt tggctgctgc gcgcgcatgc aggccaagct
     3481 tattggaaac ctctagttca atttgtggca tgacaagtgt tccgtaacgg gcacacgagg
     3541 cacccatggt ctagttctta gacataactc ttttagtcta cacgcttgat ggtttgtgtg
     3601 gcaccttcca tggctacgcg cgacaactca tcaagactac tcgctcgata gttcagaaca
     3661 cgcaagacca tggctgcatt gacacccgcg atgacctgac actgcgtgcc ggcagctttg
     3721 gcaaacccac aa
//
LOCUS       DATBNL010000615         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_67293, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000615 DATBNL010000000
VERSION     DATBNL010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67293"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..956
                     /locus_tag="VIC30_10535"
     CDS             <1..956
                     /locus_tag="VIC30_10535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804853.1"
                     /translation="VSFWQQFFDQCSQTSLDGELYFPVNLGMRAIYLQYFYPWCEKGN
                     HFPPSRSVFSRARNQFTHVKRRKNHFHTRCATCKTIDQNHLAAFRENGCVPAELREKR
                     AAHHAGVVAWRGLETHLQTRAAHNPEEILMLSFDDTAAFDLPHFTNRSYKGLPHARLG
                     YVPWMCWDHSSNKKWYIYHVKNLFKKGANRLMTCLHAVIHSTMNDSNHPSMKARKLVL
                     VGDNCAENKNNTIFAGLQHLILLGWFDHVELLFGPVGHTHNGVDQVHSIHNNGFGQHT
                     IADFGHAISKYEMVWPDPSKRPEPVLFEAQYNWDDYYEPPP"
     gene            1131..1928
                     /locus_tag="VIC30_10540"
     CDS             1131..1928
                     /locus_tag="VIC30_10540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804854.1"
                     /translation="MITTKEYFRQFIGDKMSAAMASEQFSDNVIGGLRQTFATGITPM
                     DADPIDSEVSMGMLGKRYVVGSSIAKVTMCVVKPLAPEQMFTVPEAAKENGYRINFGV
                     GNDAISQSLSSQRLPVIGYQDTPINKRPMHMHPNNIAFREKRTEVLDSSVSSGLQELL
                     DDLPSGSAKERRGRKRGHRRNEVAAAANDEDGDGKDCESDEIFTPPRSRQREGVQVHD
                     VHVVFGGTLDNPETWLFVKGGRSHIQWLERQIDNRFVVTKINKNDKP"
BASE COUNT          552 a          524 c          521 g          491 t
ORIGIN      
        1 gcgttagttt ttggcaacag ttttttgatc aatgttcaca gacatcgcta gatggtgaac
       61 tatatttccc agtcaatttg ggaatgcgtg ctatttacct gcaatacttc tatccgtggt
      121 gcgaaaaagg caatcatttc ccgccaagta gaagtgtttt ttctagagct cgcaatcaat
      181 ttacgcatgt taagcgtcgg aagaaccatt ttcacacccg atgtgctact tgcaagacca
      241 ttgatcaaaa tcacttggca gcctttcgcg agaacggctg cgtgcccgct gaacttcgcg
      301 aaaagcgcgc agctcatcac gccggtgtcg ttgcatggcg tggtttggaa acacatttgc
      361 agaccagagc tgcccacaac cccgaggaga tactgatgct ttcgttcgat gacacagctg
      421 cattcgactt gccacatttc accaatcgct cgtacaaggg gttgccacat gcgcggttgg
      481 ggtacgttcc ttggatgtgt tgggatcact cgagcaacaa gaaatggtac atctaccacg
      541 tcaagaacct tttcaagaag ggtgccaaca ggttgatgac ttgccttcat gctgtcattc
      601 actcaaccat gaatgactca aaccacccat caatgaaagc acgcaagctt gttctcgttg
      661 gtgacaattg cgcagagaac aaaaacaaca ccatatttgc agggttacaa cacctgattt
      721 tattgggctg gtttgaccat gtggagctgc tatttggccc tgtcggccat acgcacaacg
      781 gagtcgatca agtgcacagc attcacaaca atggttttgg acagcataca atcgctgact
      841 ttggccatgc tatcagcaag tacgaaatgg tttggcccga cccttccaaa cggcctgagc
      901 cagtcctttt cgaagcccag tacaactggg atgattatta cgagccacct ccgtaagctc
      961 gccggcttca ccggatgccg agatggcgac gacatgtcag ttcatggttt ccaattcaag
     1021 cgtggtaata attcagtgat tgatacctat tggaagagta gtattcacca gcgttcaagg
     1081 tgctgcgatc gaatccacag ggagcgcctg aaagtgtgcc ccccgctcgc atgataacta
     1141 ccaaggaata ctttcgtcag ttcattggcg acaaaatgtc cgctgctatg gcttcagagc
     1201 agttcagcga caatgttatt ggaggcttgc gtcagacatt cgcaacgggc ataacgccaa
     1261 tggacgccga cccaatcgac agcgaagtat ccatggggat gttgggcaag cgctacgttg
     1321 ttggttcatc gatcgcaaag gtgactatgt gtgtcgtcaa acctttggcc ccggagcaga
     1381 tgtttaccgt tccagaagcg gccaaagaaa atggttatcg aatcaacttt ggcgttggta
     1441 acgatgcgat atcacagtct ctcagctcac agcgtttacc tgtcattggc tatcaagata
     1501 cccccatcaa taagcgacct atgcacatgc acccaaacaa tattgctttt cgtgaaaaac
     1561 gtacagaagt acttgattcc tctgttagca gcggcttgca agagctgttg gacgacttac
     1621 ccagtggatc ggccaaagag cggcgcggtc gcaagcgcgg gcaccggcgt aacgaagtag
     1681 ccgctgcagc gaacgacgag gacggtgacg gaaaagattg tgaatcggac gaaattttca
     1741 ctccacccag gagtcgtcag cgggagggtg tccaggtaca tgatgtgcat gtcgtgtttg
     1801 gagggacatt ggacaatcca gagacttggt tgttcgtaaa gggcggccgg tcacatatcc
     1861 agtggctcga acggcaaatc gacaatcgtt tcgtggtaac caaaattaac aagaatgaca
     1921 aaccctaagg cttcgatgtc tggaagcacc aaattatagt catttaaact ggagttcaca
     1981 agtaactgcg ggcgcactac gaccaagaag ccattcgacc gaggccaggc ccagcaccac
     2041 gaccagtccg gcatagatcg ccgcgaacag cagcgaccat cgatgcag
//
LOCUS       DATBNL010000616         2362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_116744, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000616 DATBNL010000000
VERSION     DATBNL010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116744"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            562..1191
                     /locus_tag="VIC30_10545"
     CDS             562..1191
                     /locus_tag="VIC30_10545"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY7804855.1"
                     /translation="MSLKDSLFTDSQAKVYAWIFGQPDRSYHLSELTRLTGLASASLQ
                     REVNRMTRVGLVTSEMVGNQRRISANRQSPVFEELYQLTRKTMGAEPLLREALRPLSD
                     KIALALIYGSVAKGSDTSASDIDLLIVSDTIGLGDVLEHCHNAETQLGRKINPNCYTL
                     AEFNKRRQETDSFVQRVLAQPIVLLFGELHAHHSTREPRENRAVKSRKT"
     gene            1130..1561
                     /locus_tag="VIC30_10550"
     CDS             1130..1561
                     /locus_tag="VIC30_10550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804856.1"
                     /translation="MPITALANLEKIGQLKAEKPNSAEIDRMVSLARQRLQDASHSDL
                     SVEGRFSSVYNAIHSAALAALRWHGYRSENRYLVFQSLQHTLQWPSTKWRIIDHAHRK
                     RNLAEYEGFLEIEESSIAELRELAASLIKDVVQLTDSSTSN"
     gene            1590..1892
                     /locus_tag="VIC30_10555"
     CDS             1590..1892
                     /locus_tag="VIC30_10555"
                     /inference="COORDINATES: protein motif:HMM:NF018009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDDEXK nuclease domain-containing protein"
                     /protein_id="HEY7804857.1"
                     /translation="MWLGVVFVLTAELTHQGIGQMDMYVRMYDDLRRGKDDNPTVGIL
                     LCEDKDHSVARYSVLHGSEQLFASRYKLILPSEEELRSELAREAEAIRAVMRLDEK"
BASE COUNT          611 a          566 c          624 g          561 t
ORIGIN      
        1 agttacaaca gcgcgctctg aattcggacg tggctagtaa gggaggtgct tgagctcgtc
       61 aatgacacgc tgaggctaat gtagatcgaa ctgcagcgcg ttcaattcat caacagagtg
      121 taattactgc gtgctcccat ttgatgggga gcgcccaaaa tattgttaaa aatcagcggc
      181 ttataaaccg tggtgcccgg aaccggaatc gaaagccgca tggataaacg ctttgcggca
      241 atttggggaa ataaaatcgt tccccatgca aaatttcact tcggtgtcag cagggcacaa
      301 cagggataat ctggaaaagc agctgcgatt gatcttgtac gcgtgctgtt agcgtggtgt
      361 cgattttggc ggcacattgg cgccatctgg tctggcagta gtgctatcca tggcggtggt
      421 tgggataacg ctcacaggca gtgcacgtcg cgaggagcac atggatggct ttgcaatcac
      481 gcgttgtcag gttcggatca taggcgggcc ccccacgcat atcgagctaa atattagtag
      541 aatcatgcta atatttagtt tatgtcactt aaagactcac tgtttaccga tagccaagcc
      601 aaagtctatg cgtggatatt tggccagcct gatcgtagct accacctaag cgagttgact
      661 aggctaacag gccttgctag cgcatcgcta cagcgcgaag ttaatcggat gacgcgagtc
      721 gggcttgtga catctgaaat ggtcggtaac cagcgccgta tttctgcgaa caggcaaagc
      781 ccggttttcg aggaactgta tcaactcact cgcaagacca tgggtgcaga acccttgctt
      841 cgtgaagcac tgcgtccgct gtctgacaag atcgcacttg ccctgattta cggctcggtt
      901 gcgaaaggca gcgatacgtc cgcaagtgac attgaccttt tgatcgtcag cgacacgatt
      961 ggtctcggtg atgttctaga gcactgtcac aacgctgaga ctcagcttgg ccgaaagatc
     1021 aacccgaact gttacacctt ggcggagttc aataagcgcc gtcaggaaac cgactcattt
     1081 gtgcagcgcg tgctggccca acccatcgtt ttattatttg gagaactgca tgcccatcac
     1141 agcactcgcg aacctagaga aaatcgggca gttaaaagcc gaaaaaccta acagcgctga
     1201 gatcgatcgc atggtcagcc tggcacgcca gcgattacag gacgcctcgc attcagacct
     1261 ttcagtggag gggcgatttt ccagcgtgta taacgcgatt cactcagccg cgttagcagc
     1321 acttcgttgg catggttatc gcagtgagaa ccgctatttg gtgttccagt cattgcagca
     1381 cacactgcaa tggccatcta caaaatggcg gatcatcgac cacgcacatc gcaaacgaaa
     1441 cctcgcagaa tacgaggggt tcctggagat tgaggaatct tccatcgcgg agcttcgaga
     1501 gcttgcggca tcactgatta aggatgtggt gcagttgact gacagttcaa cttccaatta
     1561 aaaccggatc gtagccaagc ctttacccca tgtggttggg ggtggtcttc gttctaactg
     1621 ctgagctgac gcaccagggt attggccaaa tggacatgta tgtgcgcatg tatgatgact
     1681 taaggcgtgg caaagacgat aaccctaccg tcggcattct cttgtgcgaa gataaagacc
     1741 attccgtggc cagatattct gtgctgcacg gcagtgaaca attatttgca agccgctaca
     1801 agttgatcct gccaagcgaa gaggaattga gatctgagtt ggctcgtgaa gcagaggcca
     1861 tacgcgccgt gatgagactc gacgagaaat aaaacgacct cagaaagcat tgatcgacct
     1921 aaacgtggtg cccggaaccg gattcaaaag ccgcatgaat aaaggctttg cgcgagtttg
     1981 gggaaaattt tttgttcccc atgcaaaatt tcacttcggt gtcagcaggg cacaacaggg
     2041 ataatcgggt caacgaaatg aaaccggttc tgtagctgtg agtccggcgc cctataagcg
     2101 gtagcttgcg tatgcatcaa catactcacg acttagggta tgccctatgt catgagacta
     2161 atccttctag atccaacctg gcaaagactc gtgatcgtga tccactacac tggatgccga
     2221 aaaaaggcga tgatcactgg atttgactgg ttgcgtttgg cgaacagttt gaggctttcc
     2281 acggtcgccg aagggaacgc atgagtactg aaaaatcttt gtcatatttg aataaatctc
     2341 aggacgagtt agagcctctt tt
//
LOCUS       DATBNL010000617         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_196126, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000617 DATBNL010000000
VERSION     DATBNL010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196126"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VIC30_10560"
     CDS             complement(<1..504)
                     /locus_tag="VIC30_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005018092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEY7804858.1"
                     /translation="MFGFLRSYFSSDMAIDLGTANTLIYVRGKGIVLDEPSVVAIRHE
                     SGGGGKRIIQAVGREAKQMLGRVPGNIEAIRPMKDGVIADFTVTEQMLKQFIRMVHPR
                     NIFAPSPRIIVCVPCGSTQVERRAIRESALGAGASEVYLIEEPMAAAIGAGLNVSDAS
                     GSMVVDIG"
     gene            729..1037
                     /gene="gatC"
                     /locus_tag="VIC30_10565"
     CDS             729..1037
                     /gene="gatC"
                     /locus_tag="VIC30_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006216321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEY7804859.1"
                     /translation="MALTESDVTRIARLARLHLQEKETTSLQTELNEVMRLIEQLQSI
                     NTDGIEPLAHPLSAIADVGLRLRDDEALPTNDEQRRDQLMQNAPARDAGVFLVPRVIE
                     "
     gene            1041..>2013
                     /locus_tag="VIC30_10570"
     CDS             1041..>2013
                     /locus_tag="VIC30_10570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY7804860.1"
                     /translation="MSKFLDSFPTIAAYRAGLDQGQFSVTQATHALLNDIQAHQVLNA
                     FVDIDAKRSQAQATEAQAQLAKEQSHALTGVPLAHKDIFVTEGWRTTAGSHMLADYVS
                     PFDATVVAALNQVGTVSLGKVSCDEFAMGSGNEHALTGPVLNPWDHDVVPGGSSGGSA
                     AAVAARLVLGATGTDTGGSVRQPAALCGICGIKPTYGVASRFGMIAYASSLDQAGVMA
                     TNADDLALLLDAISGYDPRDATSVQTCHGAANAPGRILGDYNTLGQQYAGNKPLAGLR
                     IGIPKEYFGDGLNADVARVIEAALSQFEALGATRVEISLPNTAYAIPA"
BASE COUNT          481 a          590 c          531 g          411 t
ORIGIN      
        1 cccgatatcg accaccattg agccgctggc atcagaaaca ttgagaccag ctccaatggc
       61 agcagccatg ggctcttcaa tcagataaac ctcactggca cctgcaccaa gcgcggactc
      121 acgaattgcc cggcgctcga cctgcgttga gccacaaggc acacacacga taatgcgagg
      181 gcttggtgca aaaatattgc gcgggtgcac catgcggatg aattgcttga gcatttgctc
      241 agtgactgtg aagtcggcaa tcacaccgtc tttcatcggc cgaatcgctt caatattgcc
      301 cggcacacgc ccaagcatct gcttggcctc tcggccaacc gcctgaataa tacgtttgcc
      361 gcccccgccg ctttcatggc gaatcgccac aacagatggc tcgtcaagga caatgccttt
      421 gccacgaaca tagatcagcg tgttggccgt accgaggtcg atggccatgt cgctagagaa
      481 ataactgcgc aggaatccga acatgcaaaa gtagccacaa aaaaagggat gagggcagcc
      541 cgatcggcaa ggcgttcaat cgtttgacca cgaacacaat accgctgtaa acggtgcgca
      601 agttcgcgtg acgagaactt gccactaacc tactgcctgc tagccgtaaa tgataactta
      661 taatcgaacg tttcatgtat tcaaactgct tgtctttaga cgggcgtcaa gcgcaggaat
      721 tttccaccat ggcactgact gaaagcgacg tgacccgaat tgcacggctt gcacgtctgc
      781 atctccaaga gaaagaaaca acctcgttgc aaaccgagct aaacgaagtc atgcgactca
      841 ttgaacaatt gcagtccatc aacaccgacg ggatcgagcc tttggcccac cccttatcgg
      901 ccatcgctga cgtgggtttg cgtctacgtg acgacgaggc cttgccgacc aatgatgaac
      961 agcgtcgtga ccaactcatg caaaacgcac ccgcgcgcga cgccggggtg tttttagtgc
     1021 cgcgcgtgat tgagtaaacc atgagcaaat tcctagacag ctttcccacc atcgccgcat
     1081 accgcgcagg acttgaccaa ggtcaatttt ccgtaacgca agcaacgcac gccctactaa
     1141 acgacattca agcccatcaa gtcttaaacg cctttgtcga cattgacgcc aagcgcagtc
     1201 aggcacaggc gactgaggcg caagcgcaac tcgccaaaga gcagtcgcat gcgcttaccg
     1261 gtgtgccact ggcgcacaag gatatctttg tgaccgaagg ctggcgcacc acggcgggca
     1321 gccacatgct tgccgattat gtcagccctt ttgatgccac ggtggtcgcc gcactgaatc
     1381 aggtcggcac cgtcagtctg ggtaaagtca gttgtgacga attcgccatg ggatcaggca
     1441 atgaacatgc cctcactggc cccgtgctca acccgtggga tcacgatgtg gtgcccggcg
     1501 ggtcatctgg cggctcggcg gccgcggtgg cagcacgttt agtattgggt gccacaggca
     1561 ctgacaccgg cgggtcggtt cgccaaccag ccgctttatg tggcatttgc ggcatcaaac
     1621 cgacctatgg cgtggcctca aggtttggca tgattgctta tgcatcgagt ctggatcaag
     1681 ctggcgtcat ggccaccaac gctgacgact tggcactatt gctcgacgcc atttcaggct
     1741 acgacccacg tgatgccacc agcgttcaga cctgccatgg tgctgccaac gcgccgggac
     1801 gtattctcgg tgactacaac acgctagggc agcagtatgc tggcaacaaa ccgctagctg
     1861 gattgcgcat tggtattcca aaggaatatt ttggggatgg cttgaatgcc gacgtggcac
     1921 gcgtgattga agcggcgctc tcgcagtttg aagcgctcgg cgctacccga gtcgagattt
     1981 cactacccaa tacggcttac gcaattccgg cct
//
LOCUS       DATBNL010000618         2325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167195, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000618 DATBNL010000000
VERSION     DATBNL010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167195"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1599)
                     /locus_tag="VIC30_10575"
     CDS             complement(<1..1599)
                     /locus_tag="VIC30_10575"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011802462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEY7804861.1"
                     /translation="MPANRPRPQEQPLIEDIRLLGRLLGEVIREQEGKKAFDLIERIR
                     QLSVSFRRHDDDEADRTLKRTLRQLSDEQAVSVIRAFTYFSHLANLAEDRHYIRRRVF
                     HERAGHQQKGSLALAFERLSQAGYKPAQVAKTLAVSHVSPVLTAHPTEVQRKSILDAE
                     RAIADLLSARDQIRARESDALQSQELADNERYLKARIVQLWQTRLLRFTKLTVTDEIE
                     NALSYYESTFLTQIPRLYKQLERELGGRSVPSFLRMGQWIGGDRDGNPNVNADTLREA
                     LRRQSEVAVRHHLRALHYLGAELSMSAMLVPVGDRMQALADRSPDQNVHRADEPYRRA
                     LTGMYARLAATLMALTGQEAARHAVAPQDPYRTPEELLEDLKVIRESLKLNHGEVLAQ
                     ERLDELIRAVDVFGFHLATVDLRQSSDQHEQVVGELLRVADVCEDYLALEEPARVSML
                     MTLLQQARPLRVPGAAYSALTNKELAVFEAAREVIGQYGPRAIRQYIVSHTETVSDLL
                     EVYLLQKETGLMTGPLGGQASGQSQ"
     gene            1743..>2325
                     /locus_tag="VIC30_10580"
     CDS             1743..>2325
                     /locus_tag="VIC30_10580"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HEY7804862.1"
                     /translation="MKLTATQRKALHTSAIRALEAQGFAQGLPMMHRAGQSAARFAHE
                     HISEQAQVLCLVGPGNNGGDALVAATELQALGHHVTAVMPAANPNASADAKQALAQWL
                     AAGGKLIRTLPTEKPDLVIDGLFGIGLDRPLTEPWQTIVQTVNDWQTSVLALDIPSGV
                     DADSGQALDTPIRATWTLAFLAPSLATTLPEAQV"
BASE COUNT          557 a          676 c          592 g          500 t
ORIGIN      
        1 ctgtgactgt ccactggcct gccctccaag cgggccggtc atcagtccgg tttctttttg
       61 cagtagatag acctcaagta agtcactcac cgtctcggtg tgactcacaa tgtattggcg
      121 aatcgcacgc ggtccgtact gtccaatcac ctctcgcgca gcctcaaata cagccaattc
      181 cttgttggtc aacgcgctgt aggcagcccc cggcacacgc agtggtcgtg cttgctgcaa
      241 aagcgtcatc aacatagaca cgcgcgcagg ctcctcaagc gcgagataat cctcacacac
      301 atcggccacg cgcaacaatt cgccgaccac ctgctcgtgc tgatctgaac tttggcgtaa
      361 atcaacggtg gccaaatgaa acccaaacac atccaccgct cgaatcagct catccaaacg
      421 ttcttgggct agcacctcgc catgattaag cttcagtgac tcacgaatga cctttaagtc
      481 ctcaagcaat tcctcagggg ttcgataagg gtcttgcgga gcaacagcat ggcgcgccgc
      541 ttcctgacca gtcaatgcca tgagtgtggc ggccagtcgg gcatacatgc ccgtcagtgc
      601 tcggcggtac ggttcatccg cgcggtgcac gttctggtcg ggtgaccgat cggctagtgc
      661 ctgcatcctg tcgccaacag gcacgagcat ggccgacatg gatagctcag cacccagata
      721 atgcaaggcg cgtaaatggt ggcgcaccgc aacctcggac tggcgcctta gggcctcacg
      781 taacgtatca gcattgacgt tgggattacc atctcgatca ccgccaatcc actgacccat
      841 ccgtaaaaac gatggcacac tgcgaccacc caattcacgc tcaagttgct tgtacaaccg
      901 cgggatttgc gtcaaaaaag tcgattcgta atagctcagc gcattctcaa tttcatcggt
      961 cacagttagt ttggtaaacc gcagcaaacg ggtttgccat aactgcacaa tgcgcgcttt
     1021 caaataccgt tcgttgtcag cgagttcttg gctttgcaag gcatctgact cgcgtgcgcg
     1081 aatctggtcg cgtgcgctaa gcaaatcggc aatcgctcgt tcagcatcca gaatactttt
     1141 acgctgcacc tcagtggggt gtgcggttaa taccggtgag acgtgactga ctgccagcgt
     1201 cttggccact tgagccggct tatagccagc ttgcgacaac cgctcaaacg ccaacgccaa
     1261 actgcctttt tgttgatgcc cggcgcgctc atgaaacacg cgccgacgga tatagtgccg
     1321 atcttcggcg agattagcca gatgactaaa gtaagtgaaa gcgcgaatga cgctaacagc
     1381 ctgctcatca ctgagttggc gcaaggtgcg ctttaaagtt ctatcggcct catcatcgtc
     1441 atggcggcga aacgacaccg atagctgccg aatccgttca atcagatcaa acgctttttt
     1501 gccttcctgc tcacggatca cttcaccaag cagtcggcca agcaggcgaa tatcttcgat
     1561 caggggttgc tcttgtggac ggggacggtt agcgggcatg ttgatacctt gcagtcataa
     1621 caccaccatt ctatcggctt caggtaaatg tgcgtagtga ctgtcattgc agagccaatg
     1681 gttaagcaac gaactgctaa atcaatgatc aaacctgtct taaaactgac tagaataaca
     1741 acatgaaact gacagctacc caacgcaaag cgcttcacac gtcagcgatt cgcgcgctag
     1801 aagcccaagg ctttgcgcaa ggtcttccca tgatgcaccg tgccgggcaa tcggctgcgc
     1861 gctttgccca cgagcacatc agtgagcagg cgcaggtgct gtgtcttgtg ggtcctggca
     1921 acaacggtgg tgatgcgtta gtggctgcga cagaattgca agcactcggc caccacgtca
     1981 cagcagtcat gccagcagcc aatccaaacg cctcagcaga tgccaaacag gccttggcac
     2041 agtggttggc cgccggcggc aaattgatac gaacactacc cacagagaag ccggatttgg
     2101 ttattgatgg tttgtttggc attgggctcg atcgaccact gaccgaacca tggcaaacca
     2161 tcgtacaaac ggttaacgat tggcaaacat ccgtactagc gctagacatt ccgagtggcg
     2221 tggatgccga cagtggacag gcgctagaca caccgatccg cgcaacctgg acgctcgcat
     2281 ttctggcacc aagcttagcg acgaccctgc cagaggcaca ggtct
//
LOCUS       DATBNL010000619         4433 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_137040, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000619 DATBNL010000000
VERSION     DATBNL010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4433
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137040"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..969
                     /locus_tag="VIC30_10585"
     CDS             <1..969
                     /locus_tag="VIC30_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007856582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HEY7804863.1"
                     /translation="APLAIDGIDVYFKDESTHPTGSLKHRLARSLLLYALCNGWVGPK
                     TTLVEASSGSTAISEAYFARLIGLPFIAVVPESTAKSKCDLIRFYGGQVHLVKRSDEV
                     YEAARELAAQTAGHYMDQFTYAERATDWRGNNNIAESVFAQMANERYPVPSWVVVGAG
                     TGGTSATFGRYVRYKRLPTQVAVVDPENSVFHPYFQVGDNTVTSPHSSRIEGIGRPRV
                     EPSFIRHVVSDVLPIEDLDSIAAMRMMSDWLGRRVGPSTGTNLVGVFKLMRDMQSKGE
                     QGSIVSLICDGGDRYGHLYDDAWVAEHFGAGLEERRAQWVGGSGSR"
     gene            complement(1018..1872)
                     /locus_tag="VIC30_10590"
     CDS             complement(1018..1872)
                     /locus_tag="VIC30_10590"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEY7804864.1"
                     /translation="MMTINELTAWQHTAPWPKRSQVEQDLRLCRAVTAIFSDSLLKTH
                     LAMRGGTVLHKAHLAPAARYSEDIDLVLIRPIDPAALDLRLREVLTPVIGKPSDSKIA
                     DAWLAVRNVLRPSKILRTAYRFIPLGLNREETVKVEVNLNEGESLYPLVKVMIDTMDC
                     EGNLYQASVVSYDINEMLGTKTRALMQRDQGRDLFDLQQAWTMSEADATPYRVSSKKA
                     MDAFVWYLKKEGTEFTCEQANEVLDGKLRKPSFCRDMNTLLRPGLPKFDPHAAAITVR
                     ETFFSHLQ"
     gene            complement(1869..2684)
                     /locus_tag="VIC30_10595"
     CDS             complement(1869..2684)
                     /locus_tag="VIC30_10595"
                     /inference="COORDINATES: protein motif:HMM:NF020962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin"
                     /protein_id="HEY7804865.1"
                     /translation="MGSPKRLSAVLDDAEKSGQLNLRTDQLRAALPHASEAALHQSLH
                     RQQRRGRIVRLSRGSAHWLIVPLSHAAAGAPPPQAWLDRYMSKTLGIDYYVTLLSAAE
                     IYGASPYGVMVTQVMVEHRRRQIRVGQHEVVFHTCKQITKMPTGWHSTPEGRLRVATP
                     ELTALELIQRAYLVGGITRVAQVLVALWPSCSPQAMTVALNAVNEVPTAQRLGALLTL
                     HNQDLLQSCVKKWLNNRTLRVIALDTASRPNQDHPIDTTFKVRLGEHKKDANA"
     gene            2946..3215
                     /locus_tag="VIC30_10600"
     CDS             2946..3215
                     /locus_tag="VIC30_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018904966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7804866.1"
                     /translation="MTGKIRLPDDLGMQLRERRKALGMSKSELAQRAGKVREVIYRLE
                     AGEDVTVSSLMAVLSVLKLAICLEPAGLPTQAEVTRRFMEDDDAY"
     gene            3387..>4433
                     /locus_tag="VIC30_10605"
     CDS             3387..>4433
                     /locus_tag="VIC30_10605"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7804867.1"
                     /translation="MVQNISHAKNPTNSIGQARSSKQRLGWTQKDLAREIGVTAQAVT
                     NWFKGEDFPRPDKLLKLAVTLGLGFDELVCPDAVDAPVVAFRKKGSSQTTSTHVKQAM
                     AMGALLKPLVGFLPDRHALRLQIPAPSSEYAALQAVANEIRSRIGLSDQSVLSYEHLI
                     DEFGDNGAIIVPVLWGDKDAHQNALHILLPQEQVTFIYLNLDTRLEDFKFWTAHELAH
                     VYTPALAGTPAGASFADALAGALLFPQAVVEIAYAHVARQRSASGEIREIQRQAKSYT
                     ISLITVFCELRRYVQAHGLPPLRVQEKDIHVLRDAQQVQSVSRLLFGTTPPQTADYIA
                     VTQDGFRRPFMPSLK"
BASE COUNT          983 a         1056 c         1250 g         1144 t
ORIGIN      
        1 gcgccgctgg ccattgatgg cattgatgtg tactttaagg acgagtcgac ccatccgact
       61 gggagcctaa agcatcgact ggcgcgctct ttgttgctct atgccttatg caatggctgg
      121 gttggtccca agaccacgct ggttgaagcg tcgtcgggat ccacggcgat tagcgaggcg
      181 tatttcgcta gattgattgg tttgccattc atcgctgtgg tgcctgagtc gacagccaag
      241 tccaagtgcg atttgattcg cttctatggc ggacaagtgc atttggtcaa acgctctgac
      301 gaggtatacg aggcagcacg tgagctggcc gcacaaacgg ctggtcacta catggaccag
      361 ttcacttatg ccgaaagagc cacggattgg cgaggcaaca acaacatcgc tgagtcggtg
      421 tttgcacaga tggccaatga gcgctacccg gtgccaagtt gggtggtggt gggcgctggt
      481 accggcggca catcagcgac ctttggccgg tacgtgcggt acaagcgttt gccgacccaa
      541 gtggctgtgg ttgaccccga gaattcggtg tttcatccgt atttccaggt gggtgacaac
      601 accgtcacgt cgcctcactc aagccgtatt gaaggcattg gccgcccgcg ggttgagccg
      661 tcatttatcc gtcatgtggt cagtgacgtt ttaccgattg aggatctgga ttcgattgca
      721 gcgatgcgta tgatgtctga ttggttgggt cgccgtgtcg gcccatcaac tgggaccaac
      781 ttggtcggtg tgttcaagct catgcgtgac atgcagtcca agggtgagca gggcagcatc
      841 gtgtcactga tttgtgatgg cggcgatcgc tatggtcacc tgtatgacga tgcatgggtg
      901 gcagagcatt tcggggcggg attggaagag cgtcgagcgc agtgggtggg cggtagtggg
      961 agtaggtgaa tacgaggtgt ggggtttatg ggttgcaaat tacgtaacca tggcttctta
     1021 ttgaaggtgg gagaagaagg tttcgcgcac agtgatggct gcggcgtgcg gatcgaattt
     1081 gggtaaaccg ggtcttaaaa gcgtgttcat gtccctgcaa aaagatggct ttcttaattt
     1141 tccgtcaaga acctcgttgg cttgttcgca ggtaaattcg gtcccttcct ttttgagata
     1201 ccaaacaaag gcatccatcg cctttttgct acttacccga tatggcgttg catctgcctc
     1261 gctcattgtc caagcttgtt gcaagtcgaa tagatcgcgg ccttgatcgc gttgcattaa
     1321 agcgcgtgtt ttagtgccga gcatttcatt gatgtcatat gagacgacac tggcttgata
     1381 aaggttccct tcacaatcca tggtgtcaat cattacttta actagcggat agaggctttc
     1441 gccttcgttt aaattgacct caaccttcac ggtttcttcc cgattaaggc ctagtggaat
     1501 gaatcggtag gccgttctta gaatctttga tggacgtaaa acgttacgca ctgctagcca
     1561 ggcatcagca attttcgaat ccgatggttt gccgatgact ggggtgagta cttcacgcaa
     1621 cctgaggtcc agcgctgctg gatcaatcgg tctgatcagc accaaatcga tatcttccga
     1681 atatctcgct gctggtgcca gatgtgcctt gtgcaatacc gtgccgccgc gcattgctag
     1741 atgtgttttg agtagggaat cggaaaaaat ggcggttacg gctcggcaaa gccgtaggtc
     1801 ctgttccacc tgacttcgtt tcggccatgg tgcggtatgt tgccatgcag tcaattcatt
     1861 gatcgtcatc atgcgtttgc atcctttttg tgctcgccta ggcgcacttt gaatgtggtg
     1921 tcgatagggt ggtcttgatt gggcctgctt gcggtatcca aggcaataac tcgcaatgtt
     1981 cggttattga gccatttttt tacgcaagat tgcaacaggt cctgattgtg cagtgtcagt
     2041 agcgccccaa gccgttgggc agttggtacc tcattgaccg cgtttaaagc gacagtcatg
     2101 gcttgaggac tgcatgaagg ccaaagcgcc actagtactt gcgccacacg cgtaataccg
     2161 cctactagat aggctcgctg aattagctcc agagcggtga gttctggggt ggctacacgc
     2221 aatcggcctt ctggcgttga atgccaaccc gtcggcatct tggtgatttg tttacaggtg
     2281 tgaaacacaa cctcatgttg ccccactcga atttggcgcc gtctatgctc aaccatgact
     2341 tgtgtgacca tcacgccgta aggggaggca ccataaattt ctgcggcact gagtaaggtg
     2401 acgtaatagt cgatgccaag tgttttgctc atgtagcgat caagccacgc ttgaggcggt
     2461 ggcgcaccag ctgctgcatg gctgagcggt acgatcaacc aatgtgccga cccgcgtgat
     2521 agccgcacga tccgaccccg tctctgttga cggtgtaagg attgatgtag ggcggcttcg
     2581 ctcgcgtgcg gtagtgccgc tcgcagttgg tcggtgcgca ggtttaactg acctgacttt
     2641 tcagcgtcat cgagtacggc cgacagtcgt tttggtgatc ccatgaatct acattaattt
     2701 cgcgataaat attattttac ataatttaaa gcgaaatgta tgtctgttaa ttagctcgat
     2761 gaccactcga tgtcgcttca gtcgtaggga tgcccccctt gtagtggtta gttgtgcagc
     2821 acttaagatg cacaagttca gctggcgtgg tgcctcatgt gagtgtggtg cgtgctaaaa
     2881 acatgactga catatatgta agttgtaact tacagttgat aggtaatcgt ataagaatgc
     2941 aagtgatgac tggcaaaatt agactaccag acgacttggg tatgcagtta cgcgagcgac
     3001 gcaaagcgct tggtatgagc aaatccgagt tagcccagcg tgccggcaag gtgcgtgaag
     3061 tcatttatcg cctggaggct ggtgaagatg tgaccgtgtc atcgctaatg gccgtcctat
     3121 cagtattaaa actcgccata tgtctggagc ctgccggtct gccaacccag gctgaggtga
     3181 cgcgccgctt catggaagat gacgatgcgt actgatctgc gtcgaggcag tggtgtcgcc
     3241 atactctcag aaacagtttg tgagcttgat gtctcgactg caccggtcta gggcgacgct
     3301 ggttaaaggc ctagaggtgc actgcctgaa actcgtcgca aaggcgtaaa gctacaaagt
     3361 tgattaaact tgatttattg tatggcttgg ttcaaaatat cagtcatgca aaaaacccta
     3421 caaactcaat cggtcaagct cgctcttcaa agcaaaggct gggttggacg cagaaggatc
     3481 tagcccgtga gattggcgta acggcacaag ccgtcaccaa ttggttcaaa ggggaggact
     3541 ttccgcgccc tgacaagctt ttgaagctcg cggttacgct tgggttgggg ttcgatgagc
     3601 tcgtctgccc cgatgctgtc gacgcgccag tcgttgcctt cagaaagaaa ggcagctcac
     3661 aaacgactag tactcatgtc aaacaggcga tggccatggg cgcgttgctt aagcccctgg
     3721 tggggttttt gccagaccga catgcattgc gattgcaaat cccggcacca agcagtgaat
     3781 atgcggcctt acaggcagtt gcgaatgaaa tacgttcgcg aatcggtttg agtgatcagt
     3841 cggtgctgtc atatgagcac ttgattgatg agtttggtga taacggtgcc atcatcgtgc
     3901 cggttttatg gggtgacaaa gatgcccacc aaaatgcgtt gcacatcctg ctgccgcaag
     3961 aacaggttac cttcatctac ctgaatcttg atacgaggct tgaagacttt aagttctgga
     4021 cggcgcacga gttggcgcac gtgtacacac cggcgctagc tggcacgcca gccggagcgt
     4081 ctttcgcgga tgcactcgcg ggcgcactac tgtttccgca agcagttgtt gaaattgcct
     4141 atgcccatgt agcaaggcag cgatcagctt ccggtgaaat ccgcgagata cagcgtcagg
     4201 caaagagcta caccatttcc ctgattactg ttttttgtga gcttaggcgt tatgttcaag
     4261 cacatggtct gccgccactg cgtgttcaag aaaaggatat tcatgtgcta cgcgatgcgc
     4321 aacaggtgca aagcgtgagt cgcttgctgt ttggtacaac acccccccaa acagccgact
     4381 acattgcagt gacgcaggat gggtttcgaa gacctttcat gccatcgctt aaa
//
LOCUS       DATBNL010000620         2135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_196156, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000620 DATBNL010000000
VERSION     DATBNL010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196156"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VIC30_10610"
     CDS             complement(<1..548)
                     /locus_tag="VIC30_10610"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804868.1"
                     /translation="MLKKTDAAKIPVELIGSSPVRPDGVPKVTGMAQYGADYALPGML
                     WGKVLRSPHAHARIVSIDASRAQALPGVKAVMTAADMPDQDFTYQGPERVQVNFWHMT
                     RNVMAREKVLFAGHPVAAVAATTEAIAREALGLIAVKYEVLPHVIDVDQAMQDDAPLL
                     FEDMITRGNEQAKPSNVSRVKT"
     gene            complement(541..1026)
                     /locus_tag="VIC30_10615"
     CDS             complement(541..1026)
                     /locus_tag="VIC30_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017522608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY7804869.1"
                     /translation="MSKQHVQTTINGEPTEFLCETSQTLLDVLRNELHMTGTKEGCGT
                     GDCGACSVTLDGELVCSCLVFGAEAHGKRIETIEGMAPANDLHPLQRQFLEHAGLQCG
                     ICTPGILVAARELLKHHPDPSEEQVRYWLAGNLCRCTGYNKIIEAVLAAAREMRETHH
                     A"
     gene            complement(1031..1903)
                     /locus_tag="VIC30_10620"
     CDS             complement(1031..1903)
                     /locus_tag="VIC30_10620"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY7804870.1"
                     /translation="MAAQLRFETPASASEAAVLLASAGGQGKVLAGGTDLLVQMRSGR
                     ITPELIVDVKGIEEMVSVRRESDGWCVGASVPCMQLARHAAFAQAVPGVVDGANWIGS
                     IQVRSRASVGGNLCNASPAADSVPAMMAVGAIASIEGPNGRRQVPVEDIPLGPGKTSL
                     APGELIVSIFFPDQPANTGSAYVRFTPRTEMDIAVVGAGVAITLDAQGVCTDARVCLG
                     AVAEKALVVPEAASALVGTTVDEAALSALAAAASAAARPIDDKRGTKAFRTRLAGVIA
                     KRAAIKALARAKGE"
     gene            complement(1945..>2135)
                     /locus_tag="VIC30_10625"
     CDS             complement(1945..>2135)
                     /locus_tag="VIC30_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804871.1"
                     /translation="KQEAVSARAKGSLWQSKTSQTPDINKNKRRLRSFEIVTGLESKE
                     NRELSCIDSEWVKPRGLG"
BASE COUNT          441 a          661 c          566 g          467 t
ORIGIN      
        1 aaagttttta cccttgagac attggacggc ttagcctgtt cgttgccgcg cgtgatcatg
       61 tcttcaaaca gcaacggcgc atcgtcttgc atggcttgat cgacatcgat gacgtgtggc
      121 aagacctcgt acttcaccgc gataagcccc aacgcctcgc gcgcaatggc ctctgtggta
      181 gcagccacag cagccacggg atgaccggca aacaacacct tctcgcgcgc catcacgttg
      241 cgcgtcatgt gccagaaatt gacctgcaca cgctcaggcc cttgataggt aaagtcctga
      301 tctggcatat cggctgcggt catcacagct ttcacgccgg gcaacgcttg cgcgcgactg
      361 gcatcaatcg acacgatgcg ggcatgcgca tgtggcgagc gtaagacctt gccccacaac
      421 atgccaggca aagcgtaatc cgccccgtac tgagccatgc cagtgacctt gggcacaccg
      481 tccgggcgca ccgggcttga accaattaac tcaacgggga tcttggctgc gtcggttttt
      541 ttaagcatgg tgggtctccc gcatctcacg tgctgctgcg agcacagcct caatgatctt
      601 gttgtagccg gtgcaacggc acaaattgcc agccaaccaa tagcgcacct gctcttctga
      661 cggatcggga tgatgcttaa gcaattcgcg agcagccact aagatgcctg gcgtacaaat
      721 gccgcactgc aagccggcat gctcaagaaa ctggcgttgc aaagggtgca aatcgttggc
      781 cggtgccatg ccttcaatgg tttcaatgcg cttgccgtgg gcttcagcac caaacaccag
      841 gcacgaacac accagttcac catcgagcgt gacactacag gcaccgcagt caccagtgcc
      901 gcagccctcc ttggtacccg tcatgtgcag ctcgttgcgc aacacatcaa gcaatgtttg
      961 gctggtctcg cacagaaact cggtgggctc accattaatg gtggtttgaa catgttgttt
     1021 actcatctcg ctactccccc ttggcgcgtg caagcgcttt gatggcggct cgcttggcga
     1081 tcacacctgc caagcgggtg cgaaacgcct tggtgccacg tttatcatcg atcgggcgtg
     1141 ccgctgcact ggcagcggca gccaaggcgc taagggctgc ctcatcgact gtggtgccaa
     1201 ccagtgcgct tgccgcttcg ggcacaacca acgccttctc ggccacggca cccaggcata
     1261 cccgggcatc ggtacagacg ccttgcgcat cgagcgtgat cgcaacaccc gcgcccacca
     1321 ccgcgatgtc catttccgtg cgtggtgtaa agcgaacata ggcgctgccg gtattggcgg
     1381 gctgatcggg aaagaaaatc gacacgatca actcgcccgg cgccagtgag gtcttgcctg
     1441 ggcccaatgg aatatcttct acgggcactt gacgtcgacc atttggccct tcgatgctag
     1501 cgatcgcacc gacggccatc attgcaggca cgctgtcggc tgccggcgac gcattacaca
     1561 gattgccgcc caccgaggcg cggctacgca cctgaatcga gccaatccaa ttggcaccat
     1621 cgaccacgcc tggcacggct tgggcaaacg cagcatgtct ggccaactgc atacaaggca
     1681 cactggcacc cacgcaccag ccgtcagatt cacggcgcac gctgaccatt tcctcaatgc
     1741 ctttgacgtc gacaatcagt tccggggtga tgcggccaga gcgcatttgc accaacaaat
     1801 ctgtgccacc ggccaacacc ttgccctgtc ctccggcact ggccagtaat accgctgctt
     1861 cgctggcgct agctggcgtt tcaaatctta attgtgctgc cattgtctcg ttcctttgtg
     1921 gtgatgttgg tcattgatgc ccggttagcc caaacctcta ggcttgaccc attcgctgtc
     1981 aatgcaactt aattcacggt tttcttttga ttctagacca gtgacgatct caaacgatcg
     2041 caaacgtcgc ttgtttttgt taatgtcagg ggtctgagag gttttacttt gccaaaggct
     2101 gcctttggct cgggctgaca cggcctcttg ttttg
//
LOCUS       DATBNL010000621         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87459, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000621 DATBNL010000000
VERSION     DATBNL010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87459"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..866
                     /locus_tag="VIC30_10630"
     CDS             <1..866
                     /locus_tag="VIC30_10630"
                     /inference="COORDINATES: protein motif:HMM:NF039394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6268 family outer membrane beta-barrel
                     protein"
                     /protein_id="HEY7804872.1"
                     /translation="AFAATAHSQPMQPGQTVTSFGISGVNQFKTDMDAGGSVDWYAVN
                     ARLGVNRQFSADWMAGASVSYEYEQWSWSDASAFGGQAPWEGISTPQLGLDFVYTPTS
                     DWRLSASPSVEWAAETGVGTSGASTYGAVLLAAHTFSPTLTLGVGAGVFRQIDETKVF
                     PFISVNWQITEKVALRNPLPAGPAGGAGLELTYKVDDQWTVGAGGAYRSYRFRLNNSG
                     PYAGGIGQNRFIPVFARVSYQFMPGTRIDLYGMAATGGNVQAQSADGSQTVNSDYSTG
                     FGLGLNLSHRF"
     gene            complement(837..1538)
                     /locus_tag="VIC30_10635"
     CDS             complement(837..1538)
                     /locus_tag="VIC30_10635"
                     /inference="COORDINATES: protein motif:HMM:NF017672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA];
                     GO_process: GO:0006672 - ceramide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ceramidase domain-containing protein"
                     /protein_id="HEY7804873.1"
                     /translation="MTDWLAPIDIYCERLDAGWWAEPVNALTNLAFVVAGLLIATHRQ
                     KPATLLGALIALIGVGSFLFHTHANWLTGLVDVTFIGVYLATYAWLWPKWVWNKAAYV
                     QAGSVLGLLGLIVLASLTNQLIANVWPDVPPGVYLGALLYVMALAVFSTSNLPADTPT
                     NTSNARIWLWATAGLFLASLTARQLDMPLCEHTGGTHWLWHLLNAGVLYASARALLAG
                     SYLLAALEPMRQIKT"
BASE COUNT          390 a          447 c          516 g          385 t
ORIGIN      
        1 tggcatttgc cgccacggcg cattcgcaac ccatgcaacc aggtcagaca gtaacgtcgt
       61 ttggtatcag tggggtgaac cagttcaaga ccgacatgga tgccggcggc agtgttgact
      121 ggtatgcggt caatgcacgc ctaggtgtta accgtcagtt ctccgctgac tggatggctg
      181 gtgcctcggt atcgtatgag tatgagcagt ggtcctggtc agatgccagt gcctttggcg
      241 gtcaagcgcc ttgggaaggg atcagcaccc cgcagttggg gctggacttt gtctacacac
      301 caactagcga ttggcgccta tcggcgagtc cctcggtgga gtgggccgct gagacaggcg
      361 taggtacgtc gggtgcatca acctatggtg cggtattact ggccgcacat acgttctcgc
      421 cgacattgac tttgggtgtg ggggccggtg tatttcgcca aatcgatgaa accaaggtgt
      481 ttccgtttat ctcggtgaat tggcagatca cagagaaggt ggcgcttcgc aacccactgc
      541 ctgcaggccc tgccggtggt gctggactcg aactgacgta taaggtcgat gaccaatgga
      601 ccgttggcgc cggtggcgct taccgctcat atcggttccg gttgaacaac agtggaccgt
      661 atgccggtgg tatcggacag aaccgcttta tccccgtgtt tgcacgcgtg agctatcagt
      721 tcatgccagg cacccgaatt gatctctatg gcatggcggc caccggtgga aatgtgcagg
      781 cgcagtcagc cgatggcagt caaaccgtga attctgacta cagcactggt ttcggtctag
      841 gtcttaattt gtcgcatcgg ttctagtgct gccagcaagt agctgccagc aagtagtgcg
      901 cgagcgcttg cgtaaagcac gccggcattg agcaggtgcc acaaccagtg cgtgccaccg
      961 gtatgctcgc acagtggcat gtcgagctgg cgggcagtca gtgaggcaag aaacaagcca
     1021 gccgtggccc aaagccatat ccttgcgttg gatgtgttgg tgggcgtgtc agcgggtagg
     1081 tttgatgtac taaatacggc caaagccatc acgtacagca gcgcaccgag gtacacgccg
     1141 ggcgggacat ctggccagac attggcgatc agttgattgg tcaggcttgc cagcacaatc
     1201 aagccgagta accccagcac actgccggct tgtacgtaag cagctttgtt ccatacccat
     1261 tttggccaaa gccatgcgta ggtggccaga tagacgccga taaaagtgac atcaacaagg
     1321 ccggtcaacc aattagcgtg ggtgtgaaac aagaagctac ccacgccaat caaggcaatc
     1381 aacgctccga gcaaagtggc tggtttttga cggtgcgtcg caatgagcaa acccgcgacg
     1441 acaaacgcca agttggtcag ggcgtttaca ggctctgccc accagcctgc atcaagccgt
     1501 tcacagtaga tgtcaatggg tgcgagccaa tctgtcatgt taggtgtctc aggttggttt
     1561 tagcggccac cgtaacagtc gggaatgaca aaaagcgagg tggtcggtca ttctctggtc
     1621 attaggtggt cataaaattg acatttttgc aggcaaatat atagtcaggc gtgactttta
     1681 aggatttgct cgtgacccaa tcgaacaccc cccaagacta cgcggatgac aatgtcgt
//
LOCUS       DATBNL010000622         1714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_127058, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000622 DATBNL010000000
VERSION     DATBNL010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127058"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VIC30_10640"
     CDS             <1..670
                     /locus_tag="VIC30_10640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HEY7804874.1"
                     /translation="AVQKPDAVWEVPYLPIDPADLGRSYDAVIRVNSQSGKGGVSYLL
                     EQEQGLALPRRLQIEFSRAIQRVTDETGQEVSARDVYGIFEREYLVIGTPFKLIKHRI
                     TGDPDAGEGKQFSIEVELEVNGQRQVLTGQGDGAISAFVDSLGVPLRIVDYHEHAIGA
                     GTETKAACYVEARIADAPTGFGVGVDRDIVTASFRAVLSALNRYVAEHGASELAGALD
                     KTAA"
     gene            complement(679..1503)
                     /locus_tag="VIC30_10645"
     CDS             complement(679..1503)
                     /locus_tag="VIC30_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006763954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY7804875.1"
                     /translation="MRNGNEFDALSNEVRGLALQALVCPDVAVKCASVARLTDDQPLD
                     PGLVFPEPEPLPQSAGRPALPILVAPTKLKHRSVQTDEGRSVLLHALAHIEFNAINLA
                     LDIVWRFDGLPTAFYRDWLKVAREEAYHFQLLQTRLQALGHDYGDFPAHNGLWEMAAK
                     TSSDLLARLALVPRTLEARGLDASPAIRQKLAQAGDRESAGALDIILRDEIGHVAIGN
                     HWYRHVCQERGLDAVNTYDALAQQYDAPRLRGPFNLEARRQAGFSNAELVRLQANA"
BASE COUNT          376 a          440 c          485 g          413 t
ORIGIN      
        1 cgctgtgcaa aagcccgatg ctgtttggga agtaccttat ctgccgattg acccggccga
       61 tctcggtcgc agttacgacg cagtaattcg ggtcaacagt caatcaggca aaggtggggt
      121 gtcttatctg ctcgagcaag aacagggttt ggcattgcct cgtcgcttac aaattgagtt
      181 cagtcgtgcg attcagcggg tgactgatga aaccggtcag gaggtcagtg cacgcgatgt
      241 gtacggcatc tttgagcggg aataccttgt tattggcacg ccgtttaagc tgattaagca
      301 tcgcatcact ggcgaccctg atgccggcga gggtaaacag ttttcgattg aagttgagct
      361 cgaggtcaac ggccagcgac aagtcttaac tgggcaaggc gatggtgcca tctctgcttt
      421 tgtggatagt cttggtgtgc cattgcgtat cgttgactat cacgagcatg ccattggtgc
      481 aggcactgag accaaagcgg cttgttacgt cgaggccagg atcgcggatg cgcccacggg
      541 gttcggtgtg ggtgtggatc gtgacatcgt cacagcgtcg ttccgagcgg tgttaagtgc
      601 tctgaatcgc tatgttgctg aacacggcgc tagtgagctc gcaggtgcgc tcgataaaac
      661 agctgcctaa ggtgatgttt aggcgtttgc ttgtagtctg acgagttctg cgttgctaaa
      721 ccccgcttgt cgacgggcct ctagattaaa aggcccgcgc aagcgcggtg cgtcgtactg
      781 ttgcgcaagc gcgtcgtagg tgttcacggc atcaagccca cgctcttggc agacatggcg
      841 ataccaatgg ttaccaattg ccacatgtcc gatttcatcg cgcaaaataa tatccagggc
      901 acctgcactt tccctgtcac ccgcttgcgc tagtttttgt cggatcgccg gcgaggcgtc
      961 tagtccgcgc gcctcaagtg tgcgcggcac cagtgccaaa cgagccaaaa gatcagacga
     1021 tgttttagcg gccatttccc acagaccgtt gtgggcggga aagtcgccgt agtcatgccc
     1081 gagtgcttgt aagcgtgtct gaagcaattg aaagtgataa gcctcttcgc gcgccacttt
     1141 gagccagtcg cgataaaaag cagtcggcag accatcgaag cgccacacaa tgtccaatgc
     1201 cagattgatc gcattgaact caatgtgtgc caacgcatgc agcaacacag atcgaccttc
     1261 atcggtctgc acactgcggt gttttagctt ggtgggtgcc accaatattg gcagcgctgg
     1321 cctgccagcc gattgtggca agggctcggg ttctggaaac actaatccag ggtccagtgg
     1381 ttgatcatcg gtgagccgtg ccacgctcgc acatttgaca gcgacatcgg ggcagaccaa
     1441 ggcttgcaag gccaaaccac gaacctcatt gcttagcgca tcaaattcat ttccatttct
     1501 catggtgacg agtttagcgc ctgtgtgtca acaccgacta cactttgact gttacacgca
     1561 catacgaaac gttgtgagat tagcccaatg aatgtcaacc cgctgtcaaa cgagaaactc
     1621 aatagcacca aaataccgtt gtcggtgttg ttacccgggc ttgctgggct gatccctttt
     1681 gtggtgcttt cattgtcaga ggtgatggca ctgg
//
LOCUS       DATBNL010000623         4120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_176526, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000623 DATBNL010000000
VERSION     DATBNL010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176526"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /gene="rfaD"
                     /locus_tag="VIC30_10650"
     CDS             complement(<1..889)
                     /gene="rfaD"
                     /locus_tag="VIC30_10650"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEY7804876.1"
                     /translation="MIIVTGAAGFIGANIVRGLNARGETNILAVDDLTDGDKFVNLVG
                     CQIADYLHKTEFRQMVLDGRLGKARAILHQGACSDTTERNGQYMMDNNYRVTLELFEW
                     AQQQRVPFLYASSAAVYGAGPVYAEDLSNEKPLNVYGYSKFLFDQVVRARFDSLTAQV
                     VGLRYFNVYGPHEQHKARMASVAFHNMNQFVADGHVKLFGGWDGYPDGGQQRDFISVD
                     DVVSVNMHFLDHPQTSGIFNCGTGRAQPFNDIASSVVNGIRQARDKPLLSLEDMVAQQ
                     ILRYMPFPEDLKGRYQSYTQ"
     gene            complement(886..1848)
                     /gene="rfaE1"
                     /locus_tag="VIC30_10655"
     CDS             complement(886..1848)
                     /gene="rfaE1"
                     /locus_tag="VIC30_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEY7804877.1"
                     /translation="MIKPPVENLNLPPFPLQAASKVRVLVVGDVMLDRYWFGEVERIS
                     PEAPVPVVHVGKREDRLGGAANVARNAAALGARVTLAGIVGRDEPGSVVHAMLGQAGI
                     EQALIDDDPEHPTTLKMRVLGRQQQMVRVDFEGKPSTSCVQALTRRVQTLLADHDVLV
                     LSDYDKGALAEVSHLIDSAKAQGLAVLVDPKGLDYSRYRGASLVTPNRSEMQQAVGPW
                     RDEADLDARAQQLRTELALDALLVTRSEQGMTLFTEGSRDHVDALAHEVFDVSGAGDT
                     VLATLAVVRGTGASWRQAMQWANRAGGIVVGKLGTSTVSAEELS"
     gene            complement(1854..3080)
                     /gene="lapB"
                     /locus_tag="VIC30_10660"
     CDS             complement(1854..3080)
                     /gene="lapB"
                     /locus_tag="VIC30_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEY7804878.1"
                     /translation="MSFESWWLIFLPLLFGLGWVAARIDFRQMLSESRNLPDSYFKGL
                     NFLLNEQPDRAIDAFVEVAKLDPETTELHFALGSLFRRRGEMERAIRVHQSLLSRADL
                     PSREREHALHEIAQDYLKAGMLDRAEMAYKELKNTRYQEQSARALVRIYESEHDWPKA
                     IEAVRRLGKLTGESVPQMVHYHCEIAQSHLMSQPPAFDQVRRALDEAENLIGKDDQAT
                     AASRARVLMLEATLARAAGDAKLDRHYLLTLLDQAPGYAGLIAADLQNNFAQTQECSV
                     LLARLADHYQTSPSLDLFDVVFRLTWREHGAKAAWGFAQEALSAQPSLLGLERALSAQ
                     AQHAKEAAQDDSSHTNEGELVSLDLLKQLVARHTKRLDRYSCRVCGFQARAFYWQCPG
                     CHGWETYSPRRIEEQA"
     gene            complement(3150..3527)
                     /locus_tag="VIC30_10665"
     CDS             complement(3150..3527)
                     /locus_tag="VIC30_10665"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HEY7804879.1"
                     /translation="MRYVMWAIKLVIFAVVVLFAYKNMAPVDVQLFGSAQIVSVPLVV
                     VMLVTFVAGTLLGVLLMLPSTWRRSREAGRLKRDLAKVGKLAGRSADPKPQASSPTTT
                     STSAAAVTAHAGPATASESVKPL"
     gene            complement(3594..>4120)
                     /locus_tag="VIC30_10670"
     CDS             complement(3594..>4120)
                     /locus_tag="VIC30_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
                     /protein_id="HEY7804880.1"
                     /translation="MQLLAVSQQTGLEITIIRPPLVYGAGAKGNLGLLERAVRKGLPL
                     PIGALDFNRRSLVSLTNLVDLIACCVHHPGAANRVFLASDNEDVSTLGLAQVIAQACS
                     VRLRTLAVPVSLLTVAASVLGRRDMLRRLTDSLQVDISATCVQLNWQPVQSVEQAMTE
                     AFATGTRRAQALSR"
BASE COUNT          965 a         1264 c         1041 g          850 t
ORIGIN      
        1 cttgcgtgta gctttggtag cggcctttca aatcctcggg aaacggcata tagcgcaaga
       61 tctgctgcgc caccatatcc tcaagactga gcagtggttt gtcacgtgct tggcgaatgc
      121 cattgacaac cgagctggcg atatcgttga agggctgcgc tctgcccgtg ccgcagttaa
      181 agatgccgct ggtctggggg tggtctaaaa agtgcatatt caccgacacc acatcgtcaa
      241 ccgaaatgaa gtcacgctgc tggcctccgt cgggataccc atcccaacca ccaaacagct
      301 tgacgtgacc gtcagcgaca aactggttca tgttgtgaaa cgccaccgac gccatgcgtg
      361 ccttatgctg ctcgtgtggg ccgtatacgt tgaagtagcg caaccccacc acctgagcag
      421 taagcgaatc aaaccgtgcc cgcacaacct ggtcaaacaa gaacttggag tagccgtaga
      481 cattaagcgg cttctcatta gaaaggtctt cagcgtagac cggcccagca ccgtagacag
      541 cagctgaaga tgcatacaaa aatggcactc gctgctgttg ggcccactca aacaactcaa
      601 gggtgacacg atagttgttg tccatcatgt actggccatt gcgctcagtg gtgtccgaac
      661 acgcaccctg atgcaagatg gcacgcgctt tgcccaaacg gccatcaagc accatctgac
      721 ggaactcggt tttatgtaaa tagtcggcga tctggcaacc cacgagattc acgaacttgt
      781 cgccgtcagt caagtcatcg acagccagaa tgtttgtttc acctctggcg tttaggccac
      841 gcacgatgtt agccccaata aatccggctg cgccagtcac aataatcacg acaattcctc
      901 cgcactcaca gtcgatgtac caagcttacc caccacaata ccaccggcac gattggccca
      961 ttgcatcgct tgacgccaag acgcgccagt gccgcgcacc acggcaagcg tcgctaaaac
     1021 cgtgtcacct gcaccagaga catcaaacac ctcatgagcc agggcatcca cgtgatcacg
     1081 gctgccttcg gtaaacaatg tcatgccctg ttcagagcgc gtcaccaaca gtgcatcaag
     1141 cgccaattcg gtacgcaatt gctgggcacg cgcatcgaga tcggcttcgt cacgccacgg
     1201 cccaaccgcc tgttgcatct cgctgcggtt aggcgtaacc agactggccc cacggtagcg
     1261 gctgtagtcc aagcccttgg gatcaacaag cacagccaat ccctgcgcct tggcgctatc
     1321 aatcaaatgg ctaacctctg ccagtgcacc cttgtcgtaa tcagacagca ccaacacatc
     1381 gtggtcggcc agcaaggttt gcacgcgccg agtcagtgct tgaacgcaag acgtcgacgg
     1441 tttcccctca aaatccaccc tcaccatttg ctgctggcgc ccaagcaccc gcatcttaag
     1501 tgtcgttgga tgctcaggat catcatcaat taacgcctgt tcaatcccgg cctgacccaa
     1561 catggcatgc accacgctgc ccggctcgtc acgaccaaca atacccgcca aggtcacacg
     1621 cgcgccaagt gcagcggcgt tacgcgccac attggccgca ccaccgagac ggtcttcgcg
     1681 cttgcccaca tgaaccaccg gcaccggtgc ttcaggcgag atgcgctcga cttccccaaa
     1741 ccagtaacgg tccagcatca catcgccgac cacgagcaca cgtaccttgc tggcagcctg
     1801 taacggaaat ggcggcaaat tcaagttctc caccgggggt ttgatcatgt ctgtcatgct
     1861 tgttcttcga tacgccgtgg gctgtaggtc tcccaaccat ggcaacccgg gcactgccaa
     1921 taaaacgcgc gcgcctgaaa cccgcagaca cggcaactat atctatccaa acgcttggtg
     1981 tggcgcgcaa ccagctgttt aagtaaatcc aaagacacga gctcaccctc gttggtatga
     2041 ctcgaatcat cctgggcagc ctctttggcg tgctgcgcct gcgctgacaa agctcgctct
     2101 agtccgagta agctcggttg cgcgcttagc gcctcttgcg caaaacccca cgctgctttg
     2161 gcgccatgtt cgcgccaggt caagcgaaac accacatcaa acaaatccaa cgatgggcta
     2221 gtctggtagt gatcggccag acgcgccagc agcacactgc actcttgggt ttgcgcaaag
     2281 ttgttttgta ggtcagcggc aatcaggcca gcatagcctg gcgcttggtc cagcaaggtg
     2341 agcaaatagt ggcgatcgag tttggcgtca ccagcagcac gcgccaaagt ggcttcaagc
     2401 atcaacaccc gagcacgtga ggcagcggtg gcttgatcgt ccttgccgat gaggttctca
     2461 gcctcatcaa gcgcacggcg cacctgatca aacgctggtg gttggctcat cagatggctt
     2521 tgtgcgattt cacaatgata gtgaaccatt tgcggcacag attcaccagt gagcttgccc
     2581 agacgtcgca ccgcttcgat ggctttgggc caatcatgct cagactcata aatacgcacg
     2641 agcgcacgcg ctgattgttc ctggtagcgc gtgttcttca gttccttata ggccatctca
     2701 gcccggtcaa gcatgccggc tttcaggtag tcctgggcga tttcatgcag cgcatgttcg
     2761 cgctcacgcg aaggaagatc tgctctagac aacaagcttt gatggacacg aatggcgcgc
     2821 tccatttcac cgcgcctgcg aaacagactg ccaagcgcaa agtgcaactc cgtggtttct
     2881 gggtcgagct tggcgacctc cacgaacgca tcaatggcgc ggtcgggttg ctcgttgagc
     2941 aaaaaattca gtcccttgaa gtacgaatca ggcagattgc ggctttcgct gagcatttgc
     3001 ctaaaatcga tgcgagcagc cacccacccc agaccaaaca gcaagggcaa aaaaatcaac
     3061 caccacgatt caaagctcat cgatgcgctg cctctgcctt tttgcctatt tgacttgttg
     3121 cccgtttgtc ttttgccgtt tagagcggat tacagcggtt tgaccgactc agatgccgtt
     3181 gccgggcccg catgcgcggt caccgctgct gcactggtac tggtagtggt cgggctactc
     3241 gcctgaggtt tcgggtcagc cgagcgaccg gccaacttgc caactttggc cagatcacgc
     3301 tttaggcgac ctgcctcgcg gctacgtcgc caagtcgagg gcagcatgag caacacaccg
     3361 agcagtgtgc cggccacaaa tgtcaccaac atcaccacca ccagcggcac agaaacaatt
     3421 tgtgcgctgc caaacaactg cacatcgact ggtgccatgt tcttataggc aaacagcacc
     3481 accaccgcaa atatgacgag cttgatggcc cacatgacat aacgcatgtc cgtcgtcctt
     3541 ctaaaattga tatgcaattg taatgcacag ggcctgaggg tctatcgctc agtctatcgt
     3601 gacagcgcct gagcacgacg cgtgcccgtc gcaaacgcct cagtcatggc ttgctcgaca
     3661 ctttgcactg gttgccagtt caactgcaca catgtggcac tgatatcgac ttgcagactg
     3721 tcggtcaggc gccgcaacat gtcgcgacgt cccaacacac tggctgccac cgtcagcaaa
     3781 ctcacgggca cggcaagggt acgcagtcgc acgctacaag cctgggcaat cacttgcgct
     3841 aaacccaatg tcgagacatc ctcgttgtca cttgctaaga acactcgatt ggcagcaccg
     3901 ggatggtgaa cacaacaggc gatgagatca actaaattgg tcaggctcac caaactacgg
     3961 cggttaaagt caagcgcgcc gatgggcagt ggcaatcctt tgcgtactgc cctttcaagc
     4021 aaccccagat tgcctttggc accagcgcca tagaccaatg gcgggcggat gatggtgatt
     4081 tctagacccg tttgttggct cacggccagc aactgcatct
//
LOCUS       DATBNL010000624         1693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57245, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000624 DATBNL010000000
VERSION     DATBNL010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57245"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..665)
                     /locus_tag="VIC30_10675"
     CDS             complement(42..665)
                     /locus_tag="VIC30_10675"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY7804881.1"
                     /translation="MQTHTPPIPPDAPVGLVLADKWLSKVEDAFALLAALCIFGLMLL
                     GITQVLGRQLFDMPVPGYIDFVELSMVTFAFLAVAYCQRLGGHVRMDLFVRLVHGRAR
                     WLLEFVTTTAPILLVMVLIYFGWTHFMRAYEFGDSTIDMEIPTWPSKIVVPISFVVLF
                     LRLTIQAIGYGRLLIHPDAAPVAVPLILTEKDIAEKEIEDSLGGERP"
     gene            complement(772..>1693)
                     /gene="dctP"
                     /locus_tag="VIC30_10680"
     CDS             complement(772..>1693)
                     /gene="dctP"
                     /locus_tag="VIC30_10680"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY7804882.1"
                     /translation="MWGNPRAFTAGIEHLAKRVNEETGGNFTINIGYGEQFSKARENL
                     DSIKLGAVDGASFCNFYHPGKNPAFMVFSLPFLPLGDWDVNVEARQKLFEHPALVADM
                     DRWNGMVYAGAVMPQYEFLGNGKPPKELSDWKGMRVRAGGGIGDAMEKLGAIKTTTTA
                     TEVYTSMQRGTMDAASFPYTYAQAAYKIPEVSDWYTTNMSPGTSACPTVFSKTSYEKL
                     PPQYKQLLEDLKPEVYEVQVKAYQDIDKVNLPKFAAELEGVTYTDAQLEEFRKVAAQP
                     VWTAWVEQNKDKFNGQELIDVVLTTAKQKQ"
BASE COUNT          422 a          462 c          418 g          391 t
ORIGIN      
        1 taccagtgcc acaacaccaa tcagtccaat atcaaagctg ctcatggccg ctcacccccg
       61 agtgaatctt caatttcttt ttccgcgatg tctttctctg tcaatatcag cggtacagcc
      121 acaggcgcgg cgtcaggatg aatcagcaat cggccataac caatggcctg aatggtcaag
      181 cgtaaaaaca aaaccacaaa tgaaatcggc accacaatct tcgatggcca cgtggggatt
      241 tccatgtcaa tggtgctgtc accaaactca taggcccgca tgaagtgcgt ccaaccaaaa
      301 taaatcagta ccatcaccaa gaggatcggt gcagtcgtgg tgacaaactc caacaaccaa
      361 cgtgctcggc catgcaccaa acgcacaaat aaatccatgc gcacatgtcc gcctaaccgc
      421 tgacagtaag ccacggccaa aaaggcaaag gtcaccatcg agagctcaac aaaatcgatg
      481 tagccaggca caggcatgtc gaacagctgg cgcccaagca cttgagttat acctaggagc
      541 atcagcccaa aaatacagag cgcggccaag agcgcaaacg cgtcctcaac tttcgagagc
      601 catttgtctg cgagcaccaa accgaccggc gcatccggcg gtatcggggg cgtgtgtgtt
      661 tgcatggtaa ttgctgctta tctttgagcg gacaagccgg ctgacactgt cagccggacc
      721 tatccgcgtt tttaggtttt atgaataacg tctaacgaga atcaactcgt cttattgctt
      781 ttgcttggcg gtcgtgagaa caacatcaat gagctcttgg ccattgaact tatctttgtt
      841 ttgctcgacc caagcagtcc atacaggctg agccgccact ttgcggaact cttcgagctg
      901 cgcatcggtg taggtaacac cttcaagctc agcggcaaac tttggcaggt taactttgtc
      961 gatgtcctga taggccttga cctggacctc gtagacttca ggcttcaggt cctcaagcag
     1021 ttgcttgtac tgaggtggca acttctcgta ggaagttttg ctaaacaccg ttgggcaagc
     1081 tgaggtgcct ggcgacatgt tggtggtgta ccaatcggaa acctcaggga ttttgtaagc
     1141 cgcttgtgcg taggtgtaag ggaaagaagc agcatccatt gtgccgcgct gcatcgaggt
     1201 gtagacctcg gttgctgttg tcgtggtctt aatggcaccg agcttttcca tggcatcacc
     1261 aataccgcca ccagcacgca cgcgcatgcc cttccagtcg ctcaattctt tcggtggttt
     1321 gccattgccc aagaactcat attggggcat cacagcgcct gcatagacca tgccgttcca
     1381 gcgatccatg tcagcaacca gtgctgggtg ctcaaacaat ttttggcgcg cctcgacgtt
     1441 cacgtcccaa tcacccaatg gcaaaaacgg caatgagaac accatgaatg ctgggttctt
     1501 acctgggtgg tagaagttgc agaatgaagc accgtcaacg gcaccaagct tgatgctgtc
     1561 aaggttctcg cgggctttgg agaactgctc accatagcca atgttgattg tgaaattgcc
     1621 accggtttct tcattgacgc gcttggccag atgctcgatg cctgcggtga aggctcgtgg
     1681 attaccccac atc
//
LOCUS       DATBNL010000625         1900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147229, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000625 DATBNL010000000
VERSION     DATBNL010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147229"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VIC30_10685"
     CDS             <1..593
                     /locus_tag="VIC30_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018913835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7804883.1"
                     /translation="DGSLQPGERVKQEDLAAQLNVSRSPVLQALRLLKKDGLLEDAPG
                     RGVIVTRLTTERIVSLYQIRGALDALAAKLAAKAPTTIDMNLIERGRKVARTTDVRAM
                     IEADMAFHQAIYAASGNSLIVESAALHWVHVRRLMGAVLQQSASRQGIWDEHQAIADA
                     VNEGDGALAAQRSEEHAQAACVALVEHLKKSHRSAA"
     gene            complement(627..1337)
                     /locus_tag="VIC30_10690"
     CDS             complement(627..1337)
                     /locus_tag="VIC30_10690"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY7804884.1"
                     /translation="MKTKKTLFTQSLVLAASLAASGGALAQAAKFQGGFAQIGLGYES
                     VDPTHDSSKLSVNGRSLPVSTSSSNANGATGVIGLGWYQGIKDRFLLGLGIDYAPIAG
                     ASGTMSVSTPGLLPNQNNLTNDYSYQKKYSYNLYISPAVTVGDNGMAYAKIGYTGAKV
                     TNYNSLDYNFTGYSLGLGYRHIFKGGWYGFAEANFADYGNETESATNPIARGRTLTSS
                     GTNGLQTYNFLVGVGYKF"
     gene            complement(1577..>1900)
                     /locus_tag="VIC30_10695"
     CDS             complement(1577..>1900)
                     /locus_tag="VIC30_10695"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014110932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0106130 - purine phosphoribosyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine phosphoribosyltransferase family protein"
                     /protein_id="HEY7804885.1"
                     /translation="SLGAGFVPIRKPGKLPAHTIGHDYELEYGADRLEIHTDAISPGE
                     RVLLVDDLIATGGTAIAAIELLDQLGADIIECAFVINLPDIGGAALIKERGFTYHALT
                     EFEGD"
BASE COUNT          451 a          467 c          533 g          449 t
ORIGIN      
        1 gtgatggttc gttgcagcca ggtgagcgtg tcaagcaaga ggatcttgct gcccagctaa
       61 atgtctcaag gtcgccagtg cttcaagcgc ttcgcctgct taagaaagat gggttattag
      121 aagatgcgcc agggcgaggc gtcattgtta cccggttgac aaccgaacgc atcgtgagtc
      181 tttatcagat ccgcggggcg ctcgatgcct tggccgccaa gttagcggcc aaggcgccga
      241 caaccataga catgaatctc attgagcgag gccgcaaagt cgcgcgcaca actgatgtca
      301 gagcaatgat cgaagctgac atggcatttc atcaagcgat ctatgctgca tcaggcaata
      361 gcctaattgt ggaaagtgct gccctgcatt gggtacacgt gcgccggtta atgggcgcgg
      421 tcttacagca aagcgcgagc cgtcagggta tctgggacga gcatcaagca attgctgatg
      481 ccgtcaatga aggcgatggt gcgcttgcgg cgcaacgatc agaagagcac gctcaggctg
      541 cctgcgttgc tttggttgag catttgaaga aatcgcatcg cagtgccgcc tgagcgtcag
      601 gaaattaaaa atcccgttgt gttggcttag aacttatagc ccacaccaac caagaagtta
      661 tatgtctgca gaccattggt gcccgatgac gtcaaggtgc ggccacgtgc aatggggtta
      721 gtcgcacttt cggtttcatt gccgtagtcc gcaaaattgg cttctgcaaa cccataccag
      781 ccgcccttga agatatggcg ataacctaaa cccaatgaat acccagtgaa gttgtagtca
      841 agtgagttgt agttagtgac cttggcgccg gtgtagccga ttttggcata ggccataccg
      901 ttatcaccta ctgtgactgc tggtgagatg tagaggttgt aggagtattt cttttgataa
      961 ctgtagtcgt tggtcaggtt gttttggttg ggcaacaaac cgggtgtgct cactgacata
     1021 gtgccgctgg caccggcaat cggtgcatag tcaatgccca agcccaacaa aaagcgatcc
     1081 ttaatgcctt ggtaccatcc taggccaatc acgcccgtgg cgccgttggc attggacgag
     1141 cttgttgaga caggcagact gcgaccattg actgacagtt tgctgctgtc atgcgtgggg
     1201 tcgaccgatt cgtaccctag tccgatttga gcaaagccgc cttgaaactt ggctgcttgg
     1261 gctaatgccc caccgctcgc ggccaatgag gcggccaaga ccagtgattg ggtaaagagt
     1321 gtttttttgg ttttcatgtg tggctcttaa caaaaaaagc gctttcgcga tggatggaat
     1381 gcatctgata gtgaccttgg cttgactgaa tgtcaataaa gcccgtcatg tcacgggtat
     1441 gagcttgagg cttaggcgag ctcaaagctt gcaatagctt gcagcagtga acagaaaaca
     1501 acagtcggac agcgtcacgg tggcgcttgc gtccatctag aggggttcaa ttggtcttag
     1561 ttgcccttag tcggcctcaa tcaccctcga actcggtcag tgcgtgatag gtaaagccac
     1621 gttctttaat cagggccgca ccgccaatat cgggcagatt gatcacgaag gcgcactcga
     1681 tgatgtcagc gcctaattga tccagcagtt cgatggcagc aatggctgta ccaccggtgg
     1741 caatcaaatc gtcgactaac aacactcgct cgccaggcga aatggcatcg gtgtgaatct
     1801 ccaggcggtc ggcaccgtat tccagttcat agtcgtgacc gatggtgtga gctggtaatt
     1861 tcccaggttt acgaatcggc acaaaacctg cgcccagaga
//
LOCUS       DATBNL010000626         1627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87503, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000626 DATBNL010000000
VERSION     DATBNL010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87503"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..945
                     /gene="ftsA"
                     /locus_tag="VIC30_10700"
     CDS             <1..945
                     /gene="ftsA"
                     /locus_tag="VIC30_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003803541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEY7804886.1"
                     /translation="MVAVKDKEVTATDVARVLETAKAVNIPTDQQVLHVLTQEFIVDG
                     QEDIREPIGMSALRLEVKVHIVTGSVSAAQNIVKCVRRCGLEVQDLILQPLASSLTCL
                     TPDERELGVVLVDIGGGTTDVAIYTGGAIRHTAVLPIAGDQITSDIAAMLRTPTPDAE
                     DIKLRYGIAKQVLASPNDMVEVPGLGDRGPRQVNRQALGAVIEPRVEELFGLVQQVVR
                     DSGYEDLLASGIVLTGGTSSLPGIVELAEDVFLKPVRVAVPEYEGGLADVMRNPRFST
                     VMGLLGEARLQRLRGHKVAQQNGSFARVLARMKEWFMH"
     gene            1070..>1627
                     /locus_tag="VIC30_10705"
     CDS             1070..>1627
                     /locus_tag="VIC30_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY7804887.1"
                     /translation="MMMFEMLDNAEKTTVIKVVGVGGAGGNAVAHMIKSGVQGVDFVC
                     ANTDAQALAATSAPVQIRLGRTGLGAGAKPEQGRAAAETAREEIRAALNGANMVFITA
                     GMGGGTGTGAAPIVAEVAKELGILTVGVVTKPFDFEGNRRIKMSEDGIDELSKHVHSL
                     IVVLNENLYGLMDDDATQEDCFKAAD"
BASE COUNT          362 a          379 c          517 g          369 t
ORIGIN      
        1 atggtggcag ttaaggataa agaggtcact gcaaccgatg ttgcccgcgt actcgagacc
       61 gccaaagcgg tcaatattcc gactgatcag caagtgctgc acgtgttgac gcaagagttc
      121 atcgttgacg gccaagagga tatccgtgaa ccgattggca tgagcgcact acgcctggag
      181 gtcaaggtgc atatcgtcac ggggtcggtc agtgccgcac aaaacattgt gaaatgcgtg
      241 cgtcgctgcg ggctagaagt ccaagacctt attttgcaac cgctggcatc aagcttgact
      301 tgtctgacgc ctgatgagcg tgagctcggt gtggtgctcg tcgatattgg tggcggcaca
      361 accgatgttg cgatctacac cggcggtgca atccgtcaca cggcggtgct accgatcgcc
      421 ggtgaccaga tcacgagtga tatcgcggcg atgctgcgca cacccacgcc agatgcagaa
      481 gacatcaagc tgcgttatgg cattgccaag caagtgcttg cgagccccaa cgacatggtt
      541 gaagtgccag gtttaggtga ccgaggcccg cgccaagtca atcgacaagc gcttggcgcg
      601 gtcattgagc cgcgggttga agagttgttt ggtctggtgc agcaagtggt tcgtgattct
      661 ggttacgagg atttacttgc ctcgggcatt gtgctcacag gtgggacctc gtccttaccg
      721 ggcattgttg agttggccga agacgtgttc ttaaagccgg tgcgtgtggc agtgcctgag
      781 tacgaaggtg gtttagccga cgtgatgcgc aacccgcgct tcagcacggt gatgggcctg
      841 cttggggaag cccgtttgca acgcttgcgt ggccacaagg tggcacaaca aaacggcagt
      901 tttgccagag tgttggcgcg aatgaaagag tggttcatgc actagcgcat gaacgcaaaa
      961 gattgtgatt ggtgttgcca gatttttgtg cggcaccaat ggcaagtgca gtagaaggaa
     1021 gtgttgtttt gggaagtgtt gttttttgaa atttgacttg agggagtcga tcatgatgtt
     1081 tgaaatgttg gataacgcag agaaaaccac cgtcatcaag gtggttggtg tgggtggcgc
     1141 gggcggcaat gccgtggcac acatgattaa gtctggtgtt caaggcgttg attttgtttg
     1201 cgccaatacg gacgctcagg cgctggccgc tacaagcgcg ccagttcaga ttcgtcttgg
     1261 ccgcacaggc ttgggcgcag gcgccaaacc tgagcaaggg cgtgcagcag cagaaacggc
     1321 tcgcgaagag attcgtgcgg ctttaaatgg cgcaaacatg gtgttcatca ccgccggcat
     1381 gggcggtggc acgggcacgg gtgcagcgcc catcgtggct gaagtagcca aagagctcgg
     1441 tatcctgacc gtgggtgtag taaccaagcc gtttgacttt gaaggtaacc gtcgtatcaa
     1501 gatgtcagag gacggcatcg atgagttgtc caagcatgtg cattccttga ttgtggtgct
     1561 caatgagaac ctgtacggtt tgatggatga tgatgcaacc caagaagact gcttcaaagc
     1621 cgccgac
//
LOCUS       DATBNL010000627         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87508, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000627 DATBNL010000000
VERSION     DATBNL010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87508"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2103)
                     /locus_tag="VIC30_10710"
     CDS             complement(<1..2103)
                     /locus_tag="VIC30_10710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804888.1"
                     /translation="MITPSKWTALEPSVIRDAISGRLGFQEQFGTTYVSGATNSLALK
                     QNPIDGSANEGDAFLYAATTNGGVYVRSYDYQSDRWADTWNWVSEPTGSTVSGYNGAQ
                     GVASLALSPDGSLIAAGRGNSSNFKAYTPSGPSLQIGQIQADGSVDWLPVVSQTALAG
                     EGSTYNVRSLLWQDDALYASFYNDATNYGEIGRFVVDSFGATLSYERLGTTNSPILTA
                     TAGNADPVFFGTLTGNLYRANPDNSVNTPVSGEAWQQVVQSRLGNSEFLGRLVMQPDP
                     QQLDGYVMLAGWFNTQKGNIAHVDRLTITADGVVSAVDSIDLSGLAGSGQANVIDFYG
                     NYTLAFDPQDESLDSVLVGGNQYLSAHPVDAQPYASTGGLIRANFTSGDVEPIFGPYQ
                     DESQALIPESLLIGAPHADSRLIVTLMTPNGEVIIQGDDGGVWQLSENPDAPSILHWT
                     SLNTTGLNSLETMASGWDARSNSFASAFQDNATSIGQLGRDYMHNVWAGDGNLALMDD
                     APIDAQNALSWVYLQSQRYMFSGSVGAFALDGQGNVDQAQQLQMVTNWQGNSVQPVQW
                     VEVLAIIEANPEVPLDQIDDKAVFKSPAATNPYRQGDVVLAGQSTLYETFVPNWSDQV
                     TADGYGTLELVPVLPFSDANTIFTAVNIGSSTALINQLGQSKPHFWDSLMAASWDLTT
                     SRSAIWYRDPVVVPDAPAT"
BASE COUNT          623 a          625 c          545 g          540 t
ORIGIN      
        1 cgtcgctggg gcatcgggca cgaccaccgg atctctgtac caaatggcgc tgcgggaagt
       61 ggttagatcc caactggcgg ccatcaaact atcccagaaa tgaggctttg attgacctaa
      121 ctggttaatc aaggctgtag aactgccgat gttgactgca gtaaagatcg tattggcatc
      181 tgaaaacggt aagactggca ccagttcaag cgtgccgtag ccgtcagcag ttacctgatc
      241 agaccaatta ggaacaaacg tctcatacaa cgttgattga cccgccaaca ccacatcacc
      301 ctggcgatag gggtttgttg cagcagggct tttgaagacg gctttgtcat caatctgatc
      361 caacggcacc tcaggattcg cctcaatgat ggcaagcacc tctacccact gaaccggctg
      421 cactgaattg ccttgccagt tcgtgaccat ttgaagctgc tgagcctggt cgacattgcc
      481 ttgtccatcg agcgcaaatg ctccgaccga gccagaaaac atgtacctct gcgactgtaa
      541 gtacacccaa ctaagggcat tttgagcatc gattggtgca tcatccatta atgcaaggtt
      601 gccatcgccc gcccaaacgt tgtgcatgta atcgcgaccc aactgcccaa tcgacgttgc
      661 attatcttgg aaagctgatg caaagctgtt gctgcgggca tcccagccac tggccatggt
      721 ctcaagtgag ttaaggccag ttgtgtttaa tgaagtccaa tgcaagatag atggcgcatc
      781 aggattttct gataattgcc aaacaccccc atcatcacct tgaatgatga cctcgccatt
      841 gggagtcatt aaggtcacta tcaatctgct atcggcatgc ggcgccccaa tcaaaagact
      901 ttcgggaatc aacgcttgcg actcatcttg ataaggccca aaaattggct ctacatcgcc
      961 agacgtaaaa ttcgctcgta ttaacccgcc tgtgctcgca tacggttgcg cgtcaaccgg
     1021 gtgcgcggac aaatactgat tgccaccaac caataccgaa tctaacgact catcttgggg
     1081 atcaaaagcc aacgtgtagt taccataaaa atctattaca ttggcttgac cacttcccgc
     1141 taatcccgag agatcaattg aatcaacagc actcacgaca ccgtctgccg tgatggtcaa
     1201 acgatccaca tgagcaatgt tgcctttctg tgtattgaac caacctgcca acataacgta
     1261 gccatcgagc tgctgcggat ctggctgcat caccagtcgc cctagaaact cggagttgcc
     1321 tagtcgactt tgaacgactt gttgccaagc ctcaccgctg accggcgtat tcaccgaatt
     1381 atctggattg gcgcgataga gatttccagt caacgtacca aaaaaaaccg ggtcagcgtt
     1441 tcctgcggta gccgtcaaga taggagagtt tgtggttccg agcctctcat agctcaaagt
     1501 agcaccaaaa ctatcaacga caaatcgacc aatttcgcca tagttggtgg cgtcattgta
     1561 gaaactggca taaagcgcat cgtcttgcca cagcaaagat ctgacgttgt aagtactgcc
     1621 ctctcctgca agagccgttt gactaacaac gggtaaccaa tcaactgagc cgtccgcttg
     1681 tatctgtcca atttgcagcg agggtccgct aggcgtgtaa gccttgaagt tactggagtt
     1741 accgcgcccg gcggcaatca gagatccatc gggcgacaaa gcaaggcttg ccacaccttg
     1801 tgcaccgttg tacccagaga ctgtggaacc ggttggttcg ctaacccaat tccatgtatc
     1861 tgcccaacgg tcagactggt agtcataaga tcgaacgtac acgccgccat tggtggtggc
     1921 cgcatacaga aacgcatcgc cctcgttagc cgaaccatcg atagggtttt gttttaaagc
     1981 caggctattg gttgcccccg acacataggt ggtgccgaac tgttcctgaa atccaagcct
     2041 accgctaatc gcatcccgaa tcacgcttgg ttcaagtgcg gtccatttag agggtgtaat
     2101 cactgttaga tttccaaaaa agacgaaaaa aaagaaacaa ctgtgtaaca aaaaaagtcc
     2161 ggcaagacaa tatggatttc gcaatcgagg caaaatcgag gcggcacttt agcgactgac
     2221 ttgtgcaaaa ccacttaaat tccgctcaac tgcgtagtga ctgaacatgg tgggcagctt
     2281 gtttatgttg ggcattcaag cccctgacga ctaacaatca acgccaatgt cgc
//
LOCUS       DATBNL010000628         3005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_6970, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000628 DATBNL010000000
VERSION     DATBNL010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6970"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3005)
                     /gene="putA"
                     /locus_tag="VIC30_10715"
     CDS             complement(<1..>3005)
                     /gene="putA"
                     /locus_tag="VIC30_10715"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012402366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEY7804889.1"
                     /translation="LAAGGQNGQSGQSERVQETALQLVDAIRSKHKTSPVEALVQSFS
                     LSTQEGVALMCLAEALLRVPDHATRDALIRDKVSKGDWRAHLDDASSMFVSAATWGLL
                     LTGKLVSLNSEKSLSAALTRIIGRGGEPLIRKGVDLAMRLLGEQFVCGQSIAQALSHA
                     AKMSKQGFRYSFDMLGEAAMTASDADRYNEQYTQAIHAIGKASAGQGIYEGNGISIKL
                     SALHPRYVRAKHDRVMNELYPRLLTLVQLGRHYDIGINIDAEEADRLDISLDVLERLC
                     MEPSLAGWNGLGTVIQAYQKRALAVVDFVVDLARRSNRRMMVRLVKGAYWDTEIKRAQ
                     VDGLEDYPVFTRKVHTDVSYLACARRMLDAPQYIFAQFATHNAQTLAAIYHMAGGNYY
                     RGQYEFQCLHGMGEPMYEEVVKDAAKGGLNRPCRIYAPVGTHETLLPYLVRRLLENGA
                     NSSFVNQIHDPKINPSSLVQDPVRVARSIVPLGSPHPKIPAPIDLYRTRAYGGAVSDG
                     ETGQGTQASSSQLSGRQASRGIDLSNEARLASLAVSLMSSVQENWQAAPMVDGEGSGK
                     GRTEDSASRMERMVRIVRNPADQRDVVGEVSDATPADVAAAIDAAQAACDVWQATPAD
                     ERAAALERAADLFEANEERLIGLVVREAGKTLPTAIGEVREAVDFLRYYAIEARSLVS
                     ELNGSEMASQAVTDTPAQTVQPLGVVACISPWNFPLAIFTGQVSAALVMGSVVLAKPA
                     EQTSLIACEAVRLMHEAGVPTGALQCLPGLGQTVGQPLVASPAVDAVMFTGSTETALA
                     IQTSTSQRLNRHGQPVTLIAETGGLNALVVDSSALPEQVVADVIMSAFDSAGQRCSAL
                     RVLLLQEDSADTVIAMLKGAMDELALGNPARLSTDIGPVIDSDAMRIITDYIAEQKSQ
                     GRALYQAKSPGNAALGNFVVPTLVEVDSLDAVNREVFGPVLHVVRYQRKDLDAVLSQL
                     NAKGFGLTFGVHTRIDEMSLHCVGDIHVG"
BASE COUNT          669 a          925 c          774 g          637 t
ORIGIN      
        1 ttgcccacat gaatgtcacc cacgcagtgc agagacattt catcgatgcg ggtatgaacc
       61 ccaaaggtca acccgaagcc tttggcgttc agttgtgaca gaacggcatc aaggtctttg
      121 cgctggtagc gcaccacatg caacaccgga ccaaacacct cgcggttgac cgcatccaga
      181 ctgtcgactt ctaccaacgt cggcaccacg aagttgccca acgcagcatt gccaggcgac
      241 ttagcctgat acagcgcgcg accctgtgac ttttgttctg cgatgtagtc tgtgatgatg
      301 cgcatggcgt cactgtcaat cactggccca atgtcggtcg acaatcgcgc cggattgccc
      361 aaggccagtt catccatggc acctttgagc atggcaatga ccgtatcagc actgtcttct
      421 tgcaataaca gcacgcgcag cgccgagcag cgttgtcctg cagagtcaaa cgccgacatg
      481 atgacatcag ccacgacctg ctcaggcaat gccgacgaat ccacgaccaa tgcatttaag
      541 ccacccgttt cagcaatcag tgtcactggt tggccgtgac ggtttagtcg ctgactggtc
      601 gatgtctgga tcgccaatgc cgtttctgtt gatccggtaa acatcactgc atcgaccgca
      661 gggctggcca ccaacggctg accaacggtt tgacccaagc ctggcaaaca ctgcagcgca
      721 ccggtgggca caccagcctc gtgcatcagc cgcaccgctt cgcatgcgat caggctggtc
      781 tgttcggctg gtttggccag caccacgcta cccatcacca aggccgcaga gacttgaccc
      841 gtaaaaatcg ccaacgggaa attccatgga ctgatacaag ccaccacacc tagcggttgc
      901 acggtctgtg ccggtgtatc ggtcacggct tgtgatgcca tctcgctgcc gtttagctca
      961 gacaccagag acctggcttc gatggcgtaa taacgcaaga aatccaccgc ctcgcgaacc
     1021 tcaccgatgg ccgtcggtag tgtcttaccc gcctctcgca ccaccaagcc aatgagccgc
     1081 tcttcattgg cttcaaacaa gtccgctgcg cgctcaagtg cggctgcccg ctcatcagcg
     1141 ggcgtggctt gccagacatc gcaggcggct tgtgcggcat caatggccgc tgccacatcg
     1201 gcgggcgtgg catcgctgac ttcgcccacc acgtcacgct gatcggctgg gttgcgtact
     1261 atacgcacca tccgctccat gcgagatgct gagtcttcgg tccttccttt gccactgcct
     1321 tcgccatcaa ccatcggtgc agcctgccaa ttctcttgga cagaggacat caaagaaaca
     1381 gccaatgaag ccagacgggc ttcattggac aaatcgatac cgcgtgatgc ttgcctgccg
     1441 gataattgag agctcgatgc ctgtgtgccc tgccccgttt caccatcact gaccgcacca
     1501 ccataggcgc gagtgcgata caaatcaatc ggtgcaggaa tcttcgggtg tggggagcca
     1561 agcggcacaa tggagcgggc tacgcgcacc gggtcttgca ccaaggatga gggattaatc
     1621 ttagggtcat ggatttggtt cacgaatgaa ctgttggcac cgttttccag taagcgacgc
     1681 accaagtaag gcaagagggt ctcgtgagtg cccaccggtg cgtaaatacg gcacggtcga
     1741 ttcaaaccgc ctttggccgc gtctttgacc acctcttcgt acatgggctc acccatgcca
     1801 tgcaggcatt gaaactcgta ttgcccacga taatagttac caccagccat gtggtaaatc
     1861 gcagccaagg tctgggcgtt gtgggtggcg aactgcgcaa aaatgtactg cggcgcatcc
     1921 aacatgcgtc tggcacacgc cagatacgac acatcggtgt gcaccttgcg cgtaaacacc
     1981 ggatagtctt caagcccatc gacctgagca cgcttaattt cagtatccca gtaggcacct
     2041 ttgaccagac gcaccatcat gcgtcggttt gaacgtctgg ccagatccac cacgaagtcc
     2101 actaccgcca aggcgcgttt ctgataggcc tgaatcaccg tacctaagcc gttccatccc
     2161 gccaaactcg gttccatgca caagcgctcg agcacatcga gcgagatatc taaccggtcg
     2221 gcttcttcgg catcgatgtt gatacctatg tcgtagtgac gcccgagctg aaccaaggtc
     2281 aatagccttg gataaagctc gttcatgacc cgatcgtgtt tggcacgcac ataacgtgga
     2341 tgcaatgccg agagtttgat cgagatgccg ttgccttcgt atatgccctg cccggcactg
     2401 gctttgccga tggcatgaat ggcttgggtg tattgctcgt tataccgatc ggcgtcagac
     2461 gcggtcatgg ccgcttcacc caacatgtca aacgagtagc gaaacccttg tttgctcatc
     2521 ttggcggcat ggcttagcgc ctgtgcaatg ctttgcccgc agacgaactg ctcacccaac
     2581 agacgcatgg ccaaatccac gcctttacga atcaagggct caccgccccg accaatgatt
     2641 ctggtcagtg ctgccgacag tgacttctcg ctgtttagcg acaccagctt gccggttaac
     2701 aacagtcccc aagtcgctgc actgacaaac atggacgagg cgtcatcgag atgagcacgc
     2761 caatcgccct tggatacttt gtcgcgaatc aatgcatcgc gggtggcatg gtcgggcacg
     2821 cgtaacagcg cctcagccaa acacatcagt gccacccctt cttgcgttga tagagaaaac
     2881 gactgcacca gcgcttcaac cggcgaggtt ttatgcttgg accgaatcgc atcgaccagt
     2941 tgcaaagcag tttcctgcac ccgctcagac tgtccgctct gtccgttctg accacccgcg
     3001 gccaa
//
LOCUS       DATBNL010000629         4962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_116870, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000629 DATBNL010000000
VERSION     DATBNL010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4962
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116870"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VIC30_10720"
     CDS             complement(<1..681)
                     /locus_tag="VIC30_10720"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804890.1"
                     /translation="MADIVLDNVSRSFKRDGKEFLALDNVSFVCEDGEFVAVVGPSGC
                     GKTTCLRMAAGLEFPSSGSVKVGGVEVKKPGPDRAVVFQQFALFPWKTVEENVRFGLT
                     SLGVGRQEADERIASNLKLMNLEGYESAYPHQLSGGMQQRVAIARAYVLNPQVLLMDE
                     PFGALDAQTRTVMQEELLRVGRANPRTVMFITHAVEEAVYLADRVVVMTRRPGTIKQV
                     IDVNPIREA"
     gene            complement(684..1466)
                     /locus_tag="VIC30_10725"
     CDS             complement(684..1466)
                     /locus_tag="VIC30_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018422899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804891.1"
                     /translation="MDDKLERKQIAWLSATGLLIFFGIWTLAAWVELAPRAFLPLPWE
                     VVGRGMELIREPFSGETLQGHLTASLHRYLLGFALAAAVGVPLGLLMGWYRWLDNVIT
                     PLFDSLRFIAPIAWVPFAALWFGTGIGGPMLIIFAGAFPPCLINAYRGARFVDKKYIE
                     AAQVFGASGPRVVLEILLPASVPAIIAGLRIGAGAGWQSLIGAELIAANTGIGLMMVR
                     AQGALDTANVMVGMIAVGLFGLFIDFVLGQIEAWVNRRRGGN"
     gene            complement(1482..2264)
                     /locus_tag="VIC30_10730"
     CDS             complement(1482..2264)
                     /locus_tag="VIC30_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804892.1"
                     /translation="MAKFSDPIRFSTGVVTLVAVVAIWLIGSEYGLLNKQLFPAPEQF
                     IAAAKQLLVGTGYADGMLYEHILQSVMLILMGFFAATAVGVPLGLWMGWSRRAEALVN
                     PVFSLIRPIPALAWIPLAIVWLGLDNAAKVMILWFAAFVPAVINSFTGVRTIERPIIE
                     ASAMLGVKGWSLVKDVIVPGAMPSIFTGLRLSLQGCLTALVAAELLGALLGMGKVLYQ
                     AGLDIYPAMILVGMLTVAVVGFALTAVLDVAERRSMPWRNNG"
     gene            2375..3907
                     /locus_tag="VIC30_10735"
     CDS             2375..3907
                     /locus_tag="VIC30_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017235499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEY7804893.1"
                     /translation="MVTSNKRLTRTPELMWPRLYRHFEGSSRTLQGQLRDMLVHAVME
                     GYLSPGEALPSSRLLAQMLDLSRTTVTLALHALADKGLIVGKARSGYYVSHELQATYI
                     GARQRSDEPASANTVQWCNRIKSKPSLQRNIQKPLNWQRYPYPFIYGQFDSTLFPNAD
                     WRECVLESSQARGLRRWAPDSIDQDDDSLVEQIHRRLLPARGIWAERDQILVTAGAQQ
                     AMFLLTMLLMGPNTVVGVENPGYPDARNTLALRTKQVRALKVDQYGLCVTTNLSQCQY
                     VYVTPSHQCPTTVTMPLDRRMELLARATRDDIIFIEDDHESELNFSGNPTPALKSLDT
                     LDRVIYLGSLSKTLAHGLRLGYVVAPAELIHELRALRRLVMRHVPNNNQLVAASFIAH
                     GHQDAFVRRLNVAYKERAHILRHALNEYAPMLRPVSVHGGSALWVSAPKQLDTRALAE
                     RLYEKGVIVEPGDIFFAAKRPPLHHVRIGYSSIPKERIEDGVRIIASELKQLLTEKKK
                     RG"
     gene            complement(3917..4828)
                     /locus_tag="VIC30_10740"
     CDS             complement(3917..4828)
                     /locus_tag="VIC30_10740"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEY7804894.1"
                     /translation="MQSLKNICLLDGGLGQEIYRRASTTNAYLWSVEVMRQEPEVVQA
                     VHRAYIDAGSRVCTLNTYAATPGRLAGEGLSDSFDAIHQMALEICRAAITSSGKSVEI
                     AGSLGPLEGSYRETPSLTDEAMLSDYRRLCAAQAGVDLFLIETMTNCREAMAACQAAS
                     ETGLPYSLGLRIENNGQLRSGESLIATIEQAKAYKPSAILINCSEPEITTQIMPQLAT
                     CGLPFGAYANGFVSVEALPNGETVDALERRPDVTIEAYTAWVMQWIDAGASVVGGCCE
                     ITPEHIDHLHRTLAQQANVVPWSHAVC"
BASE COUNT         1306 a         1433 c         1198 g         1025 t
ORIGIN      
        1 agcttctcgt attggattga catcaatcac ctgcttgata gtgcctgggc gtcgcgtcat
       61 caccacaaca cggtcagcca gatacaccgc ttcttcaaca gcatgggtaa taaacatgac
      121 ggttcttgga ttggcgcgcc caacgcgcag caactcttct tgcatcactg tgcgagtctg
      181 agcatccaaa gcaccaaacg gctcatccat caacaacacc tgtgggttga gcacataggc
      241 acgtgcgatc gccacgcgct gctgcatacc cccagagagc tggtgaggat aggccgactc
      301 gtacccttcg aggttcatga gctttaggtt gctcgcgata cgctcatcgg cctcttgccg
      361 tccaacacca agagaggtca atccaaaccg aacgttctct tcgacggttt tccacggaaa
      421 caacgcaaat tgctggaaga ccacggcgcg atcggggccc ggctttttga cctcgacacc
      481 gccgaccttc acgctgcctg aactcggaaa ctcaagcccc gcggccatgc gcaaacacgt
      541 ggtcttgccg caacccgatg gacccaccac ggcgacaaac tcgccatcct cgcaaacgaa
      601 acttacgtta tctagcgcca ggaattcttt accatcgcgc ttgaagcttc ggctgacgtt
      661 gtctaatacg atgtctgcca tgattagtta ccgccccttc tacgattaac ccacgcctcg
      721 atctgaccga gcacgaagtc gataaacaac ccaaaaagac ccaccgcaat catgccgacc
      781 atgacattgg cggtgtccag tgcaccctga gcgcggacca tcatcaagcc aatacccgtg
      841 ttagccgcaa tcaattcagc accaatcaaa ctctgccacc cggcaccagc accgatacgc
      901 agcccggcaa tgatggccgg cacagaagct ggcaacaaaa tctccaacac cacacgaggg
      961 ccgctcgcac cgaacacctg tgccgcttcg atatattttt tgtcgacaaa ccgggcaccg
     1021 cgataggcat tgatcaaaca gggaggaaag gccccagcaa aaatgatcaa catcgggcca
     1081 ccgataccgg tgccaaacca caacgcggca aacggcaccc aagcaattgg cgcaataaac
     1141 cgcaggctgt caaacaatgg agtgatgaca ttgtctagcc agcggtacca tcccattaac
     1201 aaacccaacg gcacgccaac cgcagcagca agcgcaaaac caagcaaata acgatgcaga
     1261 ctagcggtta gatggccctg caaagtttcc ccggaaaacg gctcgcgtat gagctccatg
     1321 ccacggccca cgacctccca gggcagtggc agaaaggccc taggcgcgag ctccacccaa
     1381 gcggccaacg tccagatgcc aaagaaaatc aatagtcctg ttgcagaaag ccaggcgatt
     1441 tgtttgcgtt cgagtttgtc atccatggtt gtggctccgc gttaaccgtt gttgcgccac
     1501 ggcattgacc gacgctcagc cacatcgagc acagccgtca atgcaaaacc aacaaccgca
     1561 actgtcaaca taccaaccag tatcatggcc ggataaatat ccagacccgc ttggtacaac
     1621 actttgccca tgcccagcaa cgcgcccaac agttccgctg ccacaagcgc agtgagacag
     1681 ccttgaagcg atagtcgcaa tcccgtgaaa atcgatggca tggcaccggg cacaatgaca
     1741 tcttttacga gagaccagcc cttgacacca agcatggcac tggcctctat gatgggtcgc
     1801 tcgatcgttc gcacgccggt aaaactgtta atcacggccg gaacgaatgc cgcgaaccaa
     1861 agaatcatga cctttgcagc attgtctagc cctagccaaa cgattgccag cggaatccac
     1921 gccagagcgg ggatgggtcg tatcagtgaa aaaacgggat taaccaaagc ctcggcacgc
     1981 cgactccacc ccatccaaag gccgagtggc acaccaaccg ccgtagccgc aaagaacccc
     2041 atgagaatta acatgacgct ttgcaagata tgctcataca gcatgccgtc ggcgtaacca
     2101 gttcccacca acaactgctt agccgccgca ataaattgct ccggcgctgg gaacagttgt
     2161 ttgttgagca acccgtactc ggagccaatc aaccaaatgg ccacgacagc cacgagggtg
     2221 acaacgccag tgctaaatct aattggatcg ctgaactttg ccatgatgga acatccgcca
     2281 tatcagtaga aacatcttaa taatcacttg tgactagctg tgataccaga tacgatcaat
     2341 tgataatgcc agttttgcta gggaaagccc ttgaatggtt acgtccaata aacgcctgac
     2401 acgaacgcct gaacttatgt ggccacgcct ctacaggcac tttgaaggaa gttcacgcac
     2461 actgcaaggg caattacgcg acatgctggt gcatgctgtg atggaaggat acttgtcgcc
     2521 tggcgaagca ttgccctcaa gcagactact ggcacagatg cttgatttat cgcgcacaac
     2581 cgtcacactc gcgttacacg ctttggcaga caaaggcctc attgttggta aagcacgcag
     2641 cggctattac gtgagtcatg agttgcaagc gacctacatt ggtgcacgtc agcgatcaga
     2701 tgagccagca agcgccaaca cagtgcaatg gtgcaatcgc atcaaaagca aaccatcgtt
     2761 gcagcgcaac atacaaaaac cactcaattg gcaacgctat ccataccctt tcatttacgg
     2821 tcaattcgac agcacgttat ttccaaatgc ggactggcga gaatgcgtgc tcgagtcatc
     2881 gcaagcccgt ggattacgtc gctgggcacc tgatagcatt gatcaagacg acgattcact
     2941 ggtggagcaa atccatcgca gactattacc tgctcgaggc atctgggccg agcgcgatca
     3001 gatactagtc acagccggcg cgcagcaagc catgttttta ttgaccatgc tgttgatggg
     3061 gcccaacacc gttgtcggtg ttgagaaccc tggataccca gatgcacgca atacgctggc
     3121 gctgcgcacc aaacaagttc gagcattaaa ggttgaccaa tacggacttt gcgtcaccac
     3181 caacctttcg caatgccagt atgtttatgt cacaccaagc catcaatgcc caaccaccgt
     3241 gaccatgccg ttggatcgtc gcatggaact cctggctcgg gcaacgcgtg acgacattat
     3301 ttttattgaa gatgatcatg agagcgaact taacttctct ggcaatccta cacccgcgtt
     3361 aaaaagtctc gatacgctag atcgcgtcat ctaccttggt agcctctcca agaccttggc
     3421 gcacggcttg cggttgggct atgtcgttgc gccagctgag ttaattcacg aattgcgcgc
     3481 attacgacga cttgtcatgc gacatgtacc gaacaacaat caactcgtgg ccgcaagctt
     3541 tatcgcacac ggccatcaag atgcctttgt tagacgattg aatgtggcct acaaagaaag
     3601 agcacacatc ttgcgccatg ctttgaacga atacgcaccg atgttaaggc ccgtatcagt
     3661 tcacggtggc tccgcactct gggtgagcgc ccccaaacaa ctggatacac gagcactagc
     3721 cgagcgactc tatgagaaag gtgtcattgt tgagccagga gacattttct ttgcggctaa
     3781 acgacctccg cttcatcacg tgcgcattgg ctattcatcc attcctaaag agcgcatcga
     3841 agatggtgtg cgaattatcg ccagcgaact aaaacaacta ctgactgaaa agaaaaagcg
     3901 tggctaagtt gcccgctcaa cacactgcat gagaccaagg caccacgttg gcctgttgcg
     3961 ccaacgtccg atgaagatgg tcgatgtgtt cgggcgtgat ttcacaacaa ccgcccacca
     4021 cgctggcacc agcatcaatc cattgcataa cccaagccgt ataggcttcg atagtaacgt
     4081 ccggtcgacg ttcaagcgca tcgacggttt cgccattggg taatgcctca acactgacaa
     4141 agccattggc gtaggcacca aagggcaaac cgcaggtcgc gagttgaggc atgatctgtg
     4201 tggtgatttc aggttcgctg cagttaataa gaatcgctga tggtttgtac gccttggctt
     4261 gctcaatcgt tgcgattagc gactcgcccg atcgcaattg gccattgttt tctatgcgaa
     4321 ggcccaagga gtaaggcaac ccagtctcgg atgccgcctg acaggcagcc atggcttcgc
     4381 gacaattggt catggtctca atcagaaaca aatcgacacc cgcttgtgcg gcacacagtc
     4441 gtcgataatc actgagcatg gcttcatctg ttaacgacgg tgtttcacgg tagctacctt
     4501 caagcggccc gagactgcca gcgatttcaa cggatttacc tgagctggta atcgcggcac
     4561 ggcagatctc gagcgccatt tggtgaatgg cgtcaaatga atcactcaaa ccttcgcccg
     4621 ccaatcgacc gggcgtagcg gcataggtgt tcagcgtaca cacgcgggaa ccggcatcaa
     4681 tataagcacg atgcaccgct tgcaccacct caggttcttg gcgcatcact tcgaccgacc
     4741 aaagataggc gttggttgta gaagctcggc gatagatctc ttgaccaagg ccgccatcga
     4801 gcagacagat gtttttaagg gattgcacac gggctcctgg cggctgtggt tttaacgtgg
     4861 ttttaacgtt tgcggcaaaa aacaaaagca tttcttatgt cggcgcattg tggggcataa
     4921 ccctagacaa acgcaatcac tttttattgg gctgttgtga tg
//
LOCUS       DATBNL010000630         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_67478, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000630 DATBNL010000000
VERSION     DATBNL010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67478"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..151
                     /locus_tag="VIC30_10745"
     CDS             <1..151
                     /locus_tag="VIC30_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009464175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY7804895.1"
                     /translation="KNYLVAQGVPADRIYTEGKGKADPIASNATAEGRAKNRRVELEI
                     VGSRM"
     gene            361..1158
                     /gene="ubiG"
                     /locus_tag="VIC30_10750"
     CDS             361..1158
                     /gene="ubiG"
                     /locus_tag="VIC30_10750"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEY7804896.1"
                     /translation="MTHPDTKPEDHTTTDATDAANSERAAALNVDPAEIQKFSALASR
                     WWDPKSEFKPLHAINPLRLGWIKEQISPSAPDLALQNKTVLDVGCGGGILAEAMAVAG
                     GSVTGIDLADKSLTVAKLHSLESGVPVKYESISAEDLAVRKPGSFDVVTCMEMLEHVP
                     DPASVVKACADLAKPGGWLFFSTINRNPKSFLFAIIGAEYVLKLLPKGTHSWEAFIKP
                     SELADAARLGDLEVTTVIGMTYNPFTEVYRLGSDTSVNYIMAARKPL"
     gene            1250..1741
                     /locus_tag="VIC30_10755"
     CDS             1250..1741
                     /locus_tag="VIC30_10755"
                     /inference="COORDINATES: protein motif:HMM:NF017355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEY7804897.1"
                     /translation="MKSSLLSHRGYHGSIEPSVRDGTLKGHILFIDELITYAAPTIPA
                     LQEAFMSTVDDYLAHCANAGKLPQRPFKGQFNVRIAPELHQTAVLRAEAEGTSLNNIV
                     VRALRTYLVEPAANANQHDLDGQTEACAAQSDTPNTTDAPNASNAPDTSEEQSAADSL
                     QAA"
BASE COUNT          431 a          490 c          424 g          401 t
ORIGIN      
        1 caagaattat ctggtcgccc aaggcgtacc tgctgaccgt atttacacgg aaggcaaagg
       61 taaagctgac ccgatcgctt ctaacgcaac cgccgaaggt cgcgccaaga accgtcgcgt
      121 tgagctcgaa attgtgggca gccgcatgta attgggcttc tctcagaaaa agacctcctt
      181 cgggaggttt ttttttgcct gcagttcgaa ttgccaaatc gctgagtttc agacattggt
      241 tggtttgact tgaccgtaca tgggtgtctg atcgcggcat gttgctttgc ctttccctgc
      301 cgtgcgaatc tgcgacaata tcaaaacatt atctacaacg aaccctatgg tgttttagcc
      361 atgacccatc ctgacaccaa acccgaagat cacaccacaa ccgatgcaac cgacgccgcc
      421 aacagcgaac gggcggctgc actgaatgtg gatcccgctg aaattcagaa attcagcgcg
      481 ctggcttctc gttggtggga cccaaaaagt gagttcaaac ccctacatgc cattaatcca
      541 ctgcgtctag gttggattaa ggagcagatt tcgccgtcag cacccgatct agccctgcaa
      601 aataaaaccg tacttgacgt cggttgtggc ggtggcattt tggctgaagc catggcggtg
      661 gccggtggca gtgtcaccgg cattgacttg gccgacaagt cactcacagt ggccaaactg
      721 catagcttgg agtctggcgt accggttaag tacgaaagca ttagcgccga agacctggct
      781 gtgcgtaagc ctggcagctt tgatgtcgtg acctgcatgg aaatgttgga acatgtgcct
      841 gatccagcct cagttgtcaa agcatgcgcc gatctggcca agcctggtgg ttggttgttt
      901 ttctcgacca ttaatcgcaa ccccaagtcg ttcctctttg ccatcatcgg tgcagagtat
      961 gtcttaaagc tcctgcccaa aggaacccat agctgggagg catttatcaa acccagcgag
     1021 ttggctgacg ccgcacggct cggtgacttg gaagtcacca cggtgatcgg catgacctac
     1081 aacccgttta ccgaggtgta tcgcttgggt tcagacacga gcgtgaacta catcatggcc
     1141 gcccgtaagc cgttgtagct ttctacacaa actaagtaat ctccacgctt tgaattttag
     1201 ttgcccaagc tataattatt tcttttttgg taactaaaat aaaggcatca tgaaatcatc
     1261 tttactcagt catcggggat accacggctc tatcgaacct tcagtcagag acggcacact
     1321 caaaggacac attctgttca ttgatgagct catcacctac gccgccccaa ccatcccagc
     1381 actgcaagag gcgttcatgt ccactgtgga cgactatttg gcgcactgtg ccaatgctgg
     1441 caaactgccg caacgccctt ttaaaggtca gttcaatgtg cgcattgcac cagagttgca
     1501 ccaaacagcg gttctgcgcg ccgaggccga gggtacgtca ctgaataaca tcgtggttag
     1561 ggcgttaaga acctacctcg tcgaacccgc agccaacgcc aaccaacacg atctagacgg
     1621 tcaaactgag gcctgcgccg cacagtcgga tacacccaac acaactgacg cacccaacgc
     1681 atccaacgca cctgacacct ctgaggaaca aagcgcagcc gactcgttac aagccgctta
     1741 gccttc
//
LOCUS       DATBNL010000631         7420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_107295, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000631 DATBNL010000000
VERSION     DATBNL010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7420
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107295"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="VIC30_10760"
     CDS             <1..910
                     /locus_tag="VIC30_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015865721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY7804898.1"
                     /translation="LNVARGAANVLMPSEKLDAEVFWQLVEKHRVTNVFTVPTIVKVL
                     VEHPSVDEYDHSSLKFMIYAGAPMYRADQKLALQKLGRVLVQYFGLGEVTGCITVLPP
                     HMHSDDDEDPNANIGSCGRPRTGMEVAILDKELNRLPTGEGGEICVRGPAVLFGYHNN
                     PQATDKALKGGWFHTGDLGRLDERGLLYITGRESDMYISGGSNVYPREVEEILLTHPG
                     VLEVAVLGVPDPKWGEVGVAVVVRRPDADEVTPEQLFAHLEGRCAKYRWPRDFFFWES
                     LPKSGYGKITKKDVRAMLVERGEVEG"
     gene            1080..1319
                     /locus_tag="VIC30_10765"
     CDS             1080..1319
                     /locus_tag="VIC30_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEY7804899.1"
                     /translation="MQKERKVRLFRNGRNQAIRIPRAFEFDAKEVVIRRENNRLIIEP
                     VPQRGLLALLARLEPIPEDFPDVDAGLGALDDVSL"
     gene            complement(1565..2845)
                     /locus_tag="VIC30_10770"
     CDS             complement(1565..2845)
                     /locus_tag="VIC30_10770"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804900.1"
                     /translation="MLIQFSVENYRSIRDKQTLSLAASKYFKELDVNGFAVGVSEQVP
                     RLLRSSVLYGPNASGKSTLINAVDFMREQVIHSAKESQANEEIDVVPFKLSASSRAQD
                     SEFEVAFVEAGVRYQYGFRCNRTRFTEEWLFAYPHGRTQKWFHRVFDAKTKKDKYRFS
                     THFAGGKKRLDWADQTRPNALFLSTALQLNCEQLIPVLDWFQRRLRVIKAHQFQELGV
                     TMRKCRDTDDKQRVLDFMNSAGLSMTDIRIVTQAFSAEMLPNSLSASLRDELTQRMAG
                     KELMHAKFLHQELDTAKPVELDRDEESDGTIALFGFAGHWLDAIDEQRVLIVDELDSS
                     LHPLIVHHLVKLLHQDNRQAQLVFTTHDTTLLSQKILRRDQVWFMEKDMNNATQLYPL
                     SDYSPRDNEALERGYLNGRYGGIPFLKDLDFYGQ"
     gene            3565..>7420
                     /gene="purL"
                     /locus_tag="VIC30_10775"
                     /gene_synonym="purI"
     CDS             3565..>7420
                     /gene="purL"
                     /locus_tag="VIC30_10775"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEY7804901.1"
                     /translation="MSDTLTLAGSLAISPFRAQQLLEKFAGADLPVVAVQACYEHYVW
                     SDGPLVGEELERVTALLDYGVALDAPLEESDALVLRVLPRLGTVSPWASKATDIAHNC
                     GMGFVKRIERGVRYVLTIKRGLLAKKKLSESDLAGIAALLHDRMTQTVVDREFDVSVL
                     FETRQGKPVQTVDVLGVGKSALETANDEWGLALSEDEVEYLVQAFADLGRNPTDVELI
                     MFAQANSEHCRHKIFNAQWVIDGQAKDKTLFGMIRETHAKQPRGTVVAYSDNAAVMQG
                     GPAVRFEPEVWAGDRADDGVSDRSAGPTTYGRRQTVVHTLMKVETHNHPTAIAPFEGA
                     STGAGGEIRDEGATGRGSKPKAGLTGFTVSHLRFKDDIQPWEADHHGLPGRIASPLQI
                     MTDGPLGGAAFNNEFGRPNILGYFRSFEQSGGGLRWGYHKPIMIAGGLGSIDDGLTHK
                     DPLPDGALLIQLGGPGLRIGMGGGAASSMGVGANAVELDFDSVQRGNPEIERRCQEVI
                     DRCWQLGQDNPVLAIHDVGAGGLSNAFPELVNDAGRGAIFDLQQVRLEESGMSPAEIW
                     TNESQERYVLAILPEDLSRFAAIAERERCPFAVIGHATEERQLRVTGSVDVPGEVGEG
                     GEGGKNAPVDVPMDVILGKPPKMTRDVAHEAPVSEAMDLTVIDLDEAVNRVLRHPTVA
                     NKTFLITIGDRTVSGLVSRDQMVGPWQVPVADCAVTLSDYDSDHGEAMAMGERTPLAI
                     FDGPASARMAITEALTNLVSADVQSLEDIKLSANWMAACGAPGQDAVLFDTVQAASEF
                     CQSAGLSIPVGKDSLSMRTRWQDEASAQDAHTDNQTKDVIAPVSLIVSAFAPVADVKK
                     TITPQLRTDLGPTTLIMLDLGQGRQRMAGSVLAQVAGQLGQEVPDVEDAEMVRSFFAT
                     MRALVDSGIVLAYHDRSDGGLFATICEMAFAARCGVSLNLDLLTIDPYAADWGDFKIR
                     PEQVAVQRNELTLKALFNEEAGAVIQVPSAERDAVMQVLRGAGLSKHAHVIGMPNTTD
                     EIEIFRDAKKIWGRPRAELAKRWSEVSWRIARERDNPVCADAEYNLWDDAEDPGMSAH
                     VAFDAQEDIAAPFIASGARPKVAILREQGCNSHVEMAWAFDRAGFEAVDVHMTDLQHG
                     RAQLSSYTGLVAVGGFSYGDVLGAGEGWARSILFNDRLAQTFGEYFARGDVFGLGVCN
                     GCQMLAALSSMIPGAEHWPRFTRNQSEKYEARLSSVEIMDSPSIFLAGMAGTRLPVAV
                     AHGEGYADFRRQGDAAKVIRAMR"
BASE COUNT         1598 a         1787 c         2208 g         1827 t
ORIGIN      
        1 gcttaatgtc gcccgtgggg cagccaatgt gcttatgcca tcagaaaaac ttgacgctga
       61 ggttttttgg cagttggtag aaaagcatcg agtgaccaac gtctttactg ttcccacgat
      121 tgtgaaggtg ttggttgaac atccctcggt tgatgaatac gaccacagta gtctgaagtt
      181 catgatctac gccggggcac ccatgtaccg ggccgatcag aaacttgctt tgcagaagct
      241 tggccgcgtc ttggtgcagt attttgggtt gggtgaggta actggctgta ttacggtgtt
      301 gccaccgcac atgcactcag acgatgatga agatccgaac gccaacatcg gttcgtgcgg
      361 tcgtccacgc actggtatgg aagtggctat cctggacaaa gaactcaatc gtctgcccac
      421 gggtgaggga ggtgaaatct gtgtgcgcgg cccggcagtg ttgtttggtt atcacaacaa
      481 ccctcaagcc acagacaagg cactcaaagg tggttggttt cacacgggcg acttgggcag
      541 gctcgatgaa cgtgggttgc tctacatcac cggtcgtgaa tccgacatgt atatctcggg
      601 tggctcaaac gtctacccgc gcgaagtcga agaaatctta ctgacacatc ccggtgtgct
      661 tgaagtcgct gtgctcggtg tgccagatcc caagtggggt gaagtagggg tggctgtggt
      721 ggtccggcgt ccagatgccg atgaagtcac gcctgagcaa ctgttcgcgc atctagaagg
      781 ccgttgcgcc aaataccgtt ggccacgtga cttctttttt tgggagtcgt tgcccaagtc
      841 cggttatggc aagatcacca aaaaggacgt gcgggcgatg ttggttgagc gtggggaagt
      901 tgagggttag acatagactg agtttacttg tctcttgatc ggcaatgtgc gattggtgcg
      961 gttagggcgg ttggtgcgat tggggccaat gtcaaaagac ttgaaaattg cctgaaaact
     1021 ctctgtggca cgagcttgga tttggtatac gcttgatatc tacatctcgg cggattgata
     1081 tgcagaaaga aagaaaagtg cggctattta gaaatggccg caatcaagcc atccggatcc
     1141 caagggcgtt tgagtttgat gccaaagaag ttgttatccg gcgagaaaac aaccgtctca
     1201 tcatagagcc agtacctcaa agaggcttgc tcgctctgtt ggcgcggctt gagccaattc
     1261 cagaggattt tcctgatgtg gatgcaggcc ttggcgcttt agacgatgtg agcttatgac
     1321 cgtgatgtcc gccaaacccg tggagtgtca catgtcggat accaacgtca agcggtatgc
     1381 gcttaaatca tcgtcacatc tgagttgcga ttcgattctg tcaatcgtgg gtcaaaggga
     1441 ttagtggagc aagttcagga ggctcaggaa gtgctcagcg agatggaagt ttttccgcta
     1501 gatgcacctg ctgacttagt atattgcgag ctacgtcatc gcttggaaaa gtctggtcag
     1561 cccatcactg cccataaaaa tccagatctt taagaaacgg gatgccgcca tagcggccat
     1621 tcaaataacc acgctccagc gcttcattgt cacggggact gtaatcggac agtggataga
     1681 gttgtgtcgc gttgttcatg tctttttcca tgaaccaaac ttggtcacgt cgcagaattt
     1741 tttggctcag cagtgtggtg tcatgggtgg tgaacaccag ttgtgcttgc cggttgtctt
     1801 ggtgcagaag tttcaccaag tgatgcacga ttaatgggtg taggctcgag tcaagttcat
     1861 cgacgatgag aacccgctgt tcatcgatgg catctagcca atggccagcg aatccaaata
     1921 gagcgattgt tccgtctgat tcttcatcac gatcaagctc aaccggcttg gctgtgtcta
     1981 gctcttgatg caaaaacttt gcatgcatca gttctttgcc cgccattctt tgagttaatt
     2041 catcgcgcag gctagccgat aggctgtttg gtagcatttc tgcagaaaaa gcctgggtca
     2101 caatccgaat gtcagtcatc gaaaggccgg ctgagttcat gaagtctaga actcgctgct
     2161 tatcgtcggt gtcccggcat ttgcgcatgg tgacgccaag ttcttggaac tggtgagctt
     2221 tgatcacgcg caagcgacgt tggaaccaat caagcacggg gatcagttgc tcacaattga
     2281 gttgcaaggc agttgataag aaaagtgcat tgggcctagt ttggtctgcc caatccagac
     2341 gctttttgcc gcccgcgaag tgggtgctga atcggtactt gtcttttttt gtctttgcat
     2401 caaagacacg gtgaaaccac ttttgagttc ggccgtgtgg ataagcgaat agccactcct
     2461 cagtaaagcg ggtccggttg cagcgaaacc cgtactgata acgtacaccg gcctcgacaa
     2521 atgcgacctc aaactcgcta tcttgtgcgc gtgacgatgc gcttagtttg aaaggcacaa
     2581 cgtctatttc ttcattggcc tggctttcct tggccgaatg gatgacctgt tctcgcatga
     2641 agtccacggc attgatgagc gtgcttttgc cagaagcgtt tggtccatac aggacactag
     2701 agcgaagcag ccggggaacc tgttcgctaa cgccaaccgc gaagccatta acgtcaagtt
     2761 ctttgaagta cttcgaggcg gcaaggctta aggtttgctt gtctcggatg gatcgatagt
     2821 tctcaacgct aaattggatc agcatggcaa aagtgctttg ggaaagtcat tttttgcaat
     2881 tttagttcag tttttaactt taagagtaaa aaaattaaat taaattgtaa attcaaccca
     2941 tgagtgatgc ataagcggca gccgtggtcc tcagtattcg attgtctagg atgcgagcga
     3001 gggggcggtt tgccattcag tcaaacgcgt tgatggccta atagatgtct agccactggg
     3061 gatcaagtta catcggctcg gccggtcttt tgtcccggac tttatcgaac acgcgcgctt
     3121 catcgtcagt caagcaccca gcctcgttgg ccactgaagc gagcaaagtg cctagtttga
     3181 cgggatgagt tgacgctggc gtatcaatgt ttttcgtaag ttttctcacg gtttttgagt
     3241 cagagtacgt ggccatggtt ggacgcaagt cctgttggtt tggggtgttg gtcgtgtggt
     3301 actggtcgtg tgatgtggag tgtgttgtcg tgtgtcattc ggatcgacac aatacctgaa
     3361 ttttcattca cggcaaatgt tgttatatgc gggtgctcat ttccaagtca cgccgatccc
     3421 aatagcccta actgagactt gactgtagcc gtttcagtac tcgagtcttc tgtgcatagg
     3481 tcttccccac ataaggcttc ccacaacgag tcccgtcccc ccggctaaaa tgcaagcatt
     3541 gttcatcttt tgtggttgac tcacgtgtct gacaccttaa cgcttgctgg ttccttggcc
     3601 atttccccgt ttcgagccca acagttacta gaaaagtttg ctggcgctga cttgccggtt
     3661 gttgccgtgc aggcatgcta tgagcattac gtttggagcg acgggccgtt agtcggcgaa
     3721 gagctcgagc gggtgacagc actgctggac tatggcgtgg ccttagatgc gccgctagaa
     3781 gagtcagatg cgctggtgct gcgggtgcta ccaaggcttg gcactgtatc accttgggca
     3841 agtaaggcca ccgatatcgc acacaactgc ggtatgggat tcgttaaacg cattgagcgt
     3901 ggtgtgcgtt atgtgcttac gatcaagcgt ggcctgttgg ccaagaaaaa gctctctgag
     3961 tcagacctag ctggtattgc cgctctattg catgaccgca tgacccagac cgtggttgat
     4021 cgggagtttg atgtctcagt gctctttgag acccgtcaag gtaagcccgt gcagacggtt
     4081 gatgtgctcg gtgtgggcaa gtctgcgctt gagacggcca atgatgagtg gggcttggcg
     4141 ctgtcagaag acgaggttga gtacttggtg caggcattcg ccgatcttgg gcgcaacccc
     4201 accgatgtcg aactcatcat gtttgcccag gccaacagcg aacactgtcg ccacaaaatc
     4261 ttcaatgccc agtgggtgat tgacggccaa gccaaggaca agaccttgtt tggcatgatc
     4321 cgtgaaaccc atgccaaaca accgcgcggc acggtggtgg cgtattcaga caacgctgcg
     4381 gtcatgcagg gtgggccggc ggtgcggttt gagccagagg tttgggccgg tgatagggca
     4441 gatgatgggg tcagtgatag gtccgctggc cccacgacat atggtcgccg ccaaaccgtg
     4501 gtccacacct taatgaaggt cgaaacccac aaccacccaa cggccattgc accgtttgaa
     4561 ggggcatcga ctggtgctgg tggcgagatc cgcgatgaag gtgccacggg cagggggtct
     4621 aagcccaagg caggattgac aggctttact gtgtctcacc tgcgtttcaa agacgacatt
     4681 cagccatggg aagccgatca tcacggtctg ccagggcgca ttgcctcacc attgcaaatc
     4741 atgactgatg gaccattggg cggtgcggcc tttaacaatg aatttggtcg ccccaatatt
     4801 ctgggctatt tccgcagctt cgagcaaagc ggcggtggtc tgcgctgggg ttatcacaag
     4861 cccatcatga tcgctggtgg tttgggcagt atcgatgatg gtttaacgca caaagacccg
     4921 ttacccgacg gcgctttgtt gattcaactc ggtggcccag gtctgcgtat tggcatgggt
     4981 ggtggtgctg cctctagtat gggcgtgggt gccaatgccg tggaactgga ttttgattcg
     5041 gtgcaacggg gcaacccaga gattgaacgc cgctgccagg aagtgattga ccgttgctgg
     5101 caactgggtc aagacaaccc ggtgctagca attcacgatg tcggtgctgg tggcctgtcc
     5161 aatgctttcc cggagttggt caatgatgct gggcgcggtg ccatctttga tttgcagcaa
     5221 gtgcgcctag aagaatccgg catgtcaccg gctgagatct ggaccaacga aagccaggag
     5281 cgctatgtat tggcgatctt gcccgaagat ttgtcgcgtt ttgcggcgat tgccgagcgc
     5341 gagcgctgcc catttgcggt gattggtcat gcgaccgaag aacggcaact gcgggtgact
     5401 ggcagtgtag acgtgccggg tgaagttggt gaaggcggtg aaggcggtaa aaacgcacca
     5461 gttgatgtgc ccatggatgt cattctcggt aagccaccga agatgacccg agatgtcgcg
     5521 catgaagcac cggtatctga agccatggat ctgaccgtga ttgatttgga tgaagcggtt
     5581 aaccgcgtgt tgcgtcatcc cacggtggcc aacaagacgt ttttgatcac cattggtgat
     5641 cgcacggtct cagggctggt cagtcgtgac cagatggtgg ggccttggca ggtgccagta
     5701 gccgactgtg ccgtcacact atctgactac gacagtgacc atggtgaggc catggccatg
     5761 ggtgaacgca caccgcttgc catcttcgat gggccggcat cagcgcgcat ggcgatcaca
     5821 gaagccttga ccaacctggt gagtgccgat gtgcaatcgc tagaggacat caaactgtct
     5881 gccaactgga tggccgcgtg tggtgcgccc gggcaagacg ccgtgctgtt tgataccgtg
     5941 caagccgcca gtgaattctg tcaatcggca ggcctgtcca ttcccgtggg caaggactcg
     6001 ttgtcgatgc gcacgcgctg gcaagatgag gcttcagcgc aagatgcaca cacagacaac
     6061 caaaccaagg atgtcattgc accggtgtct ttgattgtca gtgcctttgc gccggtggca
     6121 gacgttaaaa aaaccatcac cccgcagtta cgtactgact tgggtccgac caccttgatc
     6181 atgttggatc tcgggcaggg caggcaacgc atggcgggtt ctgttttggc gcaagtcgcc
     6241 ggtcaactcg gccaagaagt ccctgatgtt gaagacgctg agatggtacg cagctttttt
     6301 gcgaccatgc gggcattggt ggattcaggc attgtattgg cgtatcacga tcgctccgat
     6361 ggggggttgt ttgccaccat ttgtgagatg gcgtttgctg cacgttgcgg tgtgtcgttg
     6421 aatttggatt tgttgaccat tgacccgtat gctgccgact ggggtgactt taagattcga
     6481 cccgagcaag ttgccgtgca gcgcaacgaa ttgaccttaa aagcgttgtt taacgaagaa
     6541 gccggcgctg tgattcaggt accgtcggct gagcgcgatg cggtcatgca ggtattgcgt
     6601 ggggcggggc tgtctaagca tgcgcacgtc attggcatgc ccaacaccac cgatgagatt
     6661 gagatcttta gagacgctaa aaagatctgg ggcaggccgc gcgccgaact ggccaagcgc
     6721 tggtctgagg tcagctggcg tattgcccga gagcgtgaca atccggtgtg tgccgatgcg
     6781 gaatacaacc tttgggatga cgccgaggac cctggcatgt ctgcgcacgt ggcattcgat
     6841 gcgcaagaag acatcgcggc gccctttatc gcatcgggcg cacgtccaaa ggtggctatc
     6901 ttgcgtgagc agggttgcaa cagtcacgtg gagatggcgt gggcgtttga ccgggccggg
     6961 tttgaagcgg ttgatgtgca catgaccgat ttgcagcatg gtcgtgcgca gttgagctcc
     7021 tacacggggc tagtggccgt gggcggcttt agctacggcg acgtactcgg tgccggcgaa
     7081 ggctgggcca gaagcatttt gtttaacgat cggctcgcgc agacgtttgg cgagtacttc
     7141 gcgcgtggcg acgtgtttgg tttaggtgtg tgtaatggtt gccaaatgtt ggctgcgcta
     7201 tcgagcatga tcccgggtgc cgaacactgg ccgcgcttta cccgcaacca gtcggagaaa
     7261 tatgaagcca gactgtcttc ggtggaaatc atggattcgc cctcgatctt tctggcgggc
     7321 atggccggca cgcgcctacc tgtggccgtg gcgcacggtg agggctatgc tgacttcagg
     7381 cgccaaggtg atgcagccaa ggtgattcgt gccatgcgct
//
LOCUS       DATBNL010000632         2307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_137201, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000632 DATBNL010000000
VERSION     DATBNL010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137201"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2307
                     /gene="glnE"
                     /locus_tag="VIC30_10780"
     CDS             <1..>2307
                     /gene="glnE"
                     /locus_tag="VIC30_10780"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEY7804902.1"
                     /translation="TGPRPMSYHEFFGNVTRRMMPIISEPDEHGQVFRTDLRLRPDGD
                     AGPLAWSLDAFEQYLFTQGREWERYAWLKGRIMPARFFADSDTSLTEQHIESMRQPFV
                     YRKYFDFDALAALRDLRERIRQDWQRRASARNGVDTEHNIKLGNGGIREIEFVVQLTQ
                     LIRGGKMPALQQRPLLQALRAQQRAGLLPDTTVSELADAYVFLRRVEHALQYREDAQT
                     HLLPSDPDMRTALAAAMGMSAQTFEHTLAQHRTAVEAVFRDAFRIAGLAADDDNQSSA
                     ALADNTTEPETISGPSLAHDAKDLPELLARLGADQDAMTKRVDAFLDSHRIRGLPAQS
                     RQRVDDLLPLLIGAALNSSNPMATATRLLDLIEAIAQRSAYLALLIEYPETLARVARI
                     MAASPWAAQYVVQHPVVLDSLIDWGTLMEPIDFARVQVNLTADMDACVLADGQPDIEQ
                     QMNLMRDLQRQLSFQLLAQDLAGVLSVEKLADQLSALADLLLNETLNRVWPLVLRVPA
                     AKAPKPKFAIIAYGKLGGKELGYSSDLDIVFLYDDPDPDAAERYTKLASRLTSWLSTM
                     TSSGRLYETDLRLRPDGDAGLLAVSVDAFQTYQLEHAWVWEHQAITRARFAAGDPAVG
                     QAFEAVRQAVLCMPRDPNELAEEVRKMRQKISDGHPNKSDLFDLKHDAGGMVDLEFVT
                     QYLVLRHAHAYPDLIPNLGNIGLLGIASRLGLIEQDIAQGAIDAYRVLRKEQHALRLQ
                     GADKARVPPQQMQTVITAVRRLWDTVLG"
BASE COUNT          514 a          667 c          637 g          489 t
ORIGIN      
        1 caccgggcct aggccgatgt cgtaccacga gttttttggc aatgttaccc ggcgcatgat
       61 gcccatcatc tctgagcctg acgaacacgg tcaggtgttt cgcaccgact tgcgcctgcg
      121 ccccgatggc gacgctggcc ccttggcctg gagcctcgat gcgtttgagc aatacctgtt
      181 cacacaaggc cgggagtggg aacgctacgc ctggttaaag ggtcgcatca tgccagcacg
      241 cttttttgcg gacagtgaca cgagcctgac cgagcagcat atcgaaagca tgcgccagcc
      301 atttgtctac cgtaagtact ttgactttga cgcccttgct gcgcttagag acttgcgcga
      361 gcgcattcgc caagactggc agcgtcgcgc ctcagccaga aatggcgttg acactgagca
      421 caacatcaaa ctgggtaacg gggggattcg tgagatcgag ttcgtggtgc aactgaccca
      481 gttgatacgc ggcggtaaaa tgcccgccct gcaacagcga ccattattgc aagccttgcg
      541 agcccagcag cgtgcaggtc tattacccga caccacggtc agtgagttgg ccgacgctta
      601 tgtgtttctc aggcgtgtcg aacacgcctt gcaataccgc gaggacgccc aaacgcacct
      661 gctgccaagt gacccagata tgcgcactgc actcgcagca gccatgggca tgtctgcaca
      721 gacctttgaa cacaccctcg cacaacacag aacagcggtt gaggcggtgt ttcgagatgc
      781 gtttcgtatt gccggcttgg ccgccgacga cgataaccag tcaagcgcag ccctagccga
      841 caacacaact gaaccagaaa ccatctctgg cccgagccta gcgcatgatg ccaaagactt
      901 gcctgaattg ctggcgcgat tgggtgcgga tcaagatgcc atgacaaagc gcgtagacgc
      961 ttttctagac agtcatcgca tccgtggcct acctgcacaa agccgacagc gcgttgatga
     1021 tctgctgccg ttgctgattg gcgcagcctt aaacagcagc aacccaatgg ccacggccac
     1081 gcgcttacta gatctgattg aggcgattgc tcaacgaagc gcttacttgg cactgctgat
     1141 tgaatatcca gagaccttgg cacgggtggc acgcatcatg gcagccagtc cctgggcggc
     1201 tcaatatgtt gtccaacacc ccgtggtact cgatagcctg atcgattggg gcacgctgat
     1261 ggagccgatt gattttgcgc gggtgcaggt caatctgacc gctgacatgg atgcctgcgt
     1321 cttggctgat ggtcaacccg atatcgaaca acagatgaat ctgatgcgtg acttgcaacg
     1381 gcaattaagt ttccagttgc tggcacagga cttagcaggc gtgctctcag tggaaaagct
     1441 cgctgaccaa ctctcggcgc ttgccgatct gttgttaaac gaaaccctca atcgcgtctg
     1501 gccactggtc ttgagggtgc ctgcagcaaa agcacccaaa ccgaagtttg ccatcatcgc
     1561 ttacggtaaa ttgggaggta aagaactggg atactcctcc gacctcgata ttgtctttct
     1621 ttatgacgac cccgatcctg atgccgccga acgctacacc aaactggcca gtcgcctgac
     1681 ctcgtggctc tcgaccatga cctcttcggg acggctatat gagaccgact tgcgtctgcg
     1741 gcccgatggc gacgcggggt tgctagcagt atcggtcgat gcctttcaaa cctaccagct
     1801 cgagcacgcc tgggtttggg agcatcaggc gatcactcgc gcgcgtttcg cagctggtga
     1861 ccctgcggtt gggcaggcat ttgaagctgt acgccaggcg gtgctgtgca tgccccgtga
     1921 ccccaatgag cttgcagaag aagttcgtaa gatgcgacaa aaaatcagcg acggccatcc
     1981 caacaaaagc gatctgtttg acttgaaaca cgacgccggc ggcatggttg atctggagtt
     2041 tgttacacaa tatctagtgc tacgccacgc gcatgcctac cccgatttaa tcccgaacct
     2101 tggcaatatc ggcctgttgg gtatcgccag ccggctcggt ctgattgagc aagacattgc
     2161 acaaggcgcc attgacgctt atcgggtgct gcgcaaagag caacacgccc tgcgattgca
     2221 gggcgccgat aaagcacgtg tgccaccaca acaaatgcaa accgtgatca cggctgtgcg
     2281 tcggctgtgg gacactgtgc ttggtta
//
LOCUS       DATBNL010000633         1632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147339, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000633 DATBNL010000000
VERSION     DATBNL010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147339"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1632
                     /locus_tag="VIC30_10785"
     CDS             <1..>1632
                     /locus_tag="VIC30_10785"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7804903.1"
                     /translation="LNQITNQADAIAGAVDLFQVKFLVAVAVVMAVSVLAIGLRAGLI
                     VGLSIPLTLGLTFLLMKVTGMNLDRISLGALIIALGLLVDDAIIAIEMMIVKMEQGWD
                     RVRAATHAWQVTAAPMLFGTLVTVTGFVPIGFAQSGVGEYAGGIFWVLAYALLVSWLV
                     AVTFTPYLGVKLLPKMSDHHVDPQTVYNTPNYRRLRALVQWCVTRKRRVVLATVGLLI
                     LSIAGMAGPVEKQFFPSSDRPEVLISVYLPEGTAIGKTDEVVRRLESNLKDMPQIKTL
                     SAYIGAGAPRFFISANPEQPDPAFAKVIAVTHGVKDRESLISALEGQIDEGEYADARV
                     RVSRLLYGPPVQWPVSFRVMGPDPQVLREIGHDVVDVMRQNPTIVDPNLDWDERAPVL
                     TLDLDPQRLQTLGLTPLNVAEQLQFQLDGVPVTNVRRDIRQVQVRARALPESGNLLQN
                     IEIRTPDGRKVPLSQLGAAEVEFEEPVIKRYNREPALYINADVQGAQPPDATMAVWQA
                     LEPLRADLPSGYQLSIGGSIEQSEKADASIQKLQPL"
BASE COUNT          355 a          442 c          459 g          376 t
ORIGIN      
        1 actgaaccaa atcaccaacc aagccgatgc cattgccggt gcggttgacc tgtttcaggt
       61 gaagttcttg gttgccgtgg ccgtggttat ggccgtcagt gtgctggcca tcggcttgag
      121 ggctggattg atcgtcggac tatcgatacc gctgacgctg gggctgacgt ttttgctcat
      181 gaaagtcact ggcatgaatc tggatcggat ctcacttggg gccttgatca ttgcactcgg
      241 actgctggtc gatgatgcca tcatcgccat tgaaatgatg atcgtcaaaa tggagcaagg
      301 ctgggaccgg gtgcgtgcgg ccacccatgc ctggcaggtc acagccgccc ccatgctgtt
      361 tggcacactg gtcactgtta ccggatttgt gcccatcgga tttgcccaat caggcgttgg
      421 cgaatacgcc ggcgggattt tctgggtgct ggcttatgca ttgctcgtct catggctagt
      481 ggccgtgacc ttcacacctt atctgggcgt gaagttattg ccaaaaatgt cggatcatca
      541 cgttgacccg caaaccgtct acaacacgcc aaactaccga cgcttgcgtg cattggtgca
      601 atggtgtgtc accagaaaaa ggcgggtggt gctcgccaca gttggcctat tgatccttag
      661 tattgccggc atggcagggc cagtagagaa acagtttttc ccgagctcgg atcgacctga
      721 agtgctgata tcggtttacc tgcccgaggg tacagcgatt ggcaagaccg atgaggtcgt
      781 tagacgactt gaatccaatc tcaaggacat gccacaaatc aagacgcttt cggcctatat
      841 cggtgcgggc gcaccacggt tctttatttc ggccaacccc gagcagcctg atccggcgtt
      901 tgccaaggtc atcgcggtca cccatggggt caaagatcgt gagtcactca tttcagcact
      961 tgaggggcaa attgacgagg gtgagtacgc cgatgcccgc gtgcgtgtct cgcgcctact
     1021 ttatggccca ccggtgcaat ggccggttag tttcagggtc atgggacctg acccacaggt
     1081 attgcgcgaa attggccatg atgtggttga tgtcatgcgg cagaacccca ccattgttga
     1141 cccgaatcta gattgggatg agcgcgcccc ggtactcaca ctggatctag atccacagcg
     1201 gctgcaaacc ttggggttaa ctccgttgaa cgtggccgag cagctgcaat ttcaactcga
     1261 tggcgttccc gtgaccaacg tgcgccgaga catccggcaa gtccaagtgc gggcgcgggc
     1321 attgcctgaa tcaggcaact tgctacaaaa cattgagatt cgcacccccg atggacgcaa
     1381 agtccccttg tcacaactcg gtgcagcaga agtggagttt gaagaacctg tgatcaaacg
     1441 ctacaaccgg gagccagcgc tttacatcaa tgcagatgtt caaggtgctc aaccgcctga
     1501 tgccactatg gccgtatggc aggcacttga acccttgcgc gctgacttac cgtcgggcta
     1561 tcaactgagc attggtggct caattgaaca atctgagaaa gccgacgcct cgattcagaa
     1621 actgcagcca ct
//
LOCUS       DATBNL010000634         1875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_77287, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000634 DATBNL010000000
VERSION     DATBNL010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77287"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..898
                     /locus_tag="VIC30_10790"
     CDS             65..898
                     /locus_tag="VIC30_10790"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HEY7804904.1"
                     /translation="MCLAVLAINAHPDWPLIVAANRDEYHARPTQAMHPWSENPNLLA
                     GKDLLAGGTWLGVTTSGCFALLTNVRDPAHHQHHAPSRGALIPDFLGSQHVTSQYLEM
                     LAQTANQYNGFNLIAQQPDGQIWHASNYQTPFAHPMPAGVHGISNALLNTPWPKTQRT
                     TEALKARLMSTASIGSDDLYEALIGIMRDTTPIDDTLLPSTGISLPRERLLATPFIVS
                     PDYGTRCSTVILRHRNGNQWVQEDSYDATGACIGRLRYGSVAGEPWRVIDAGPGSLST
                     D"
     gene            complement(829..1548)
                     /gene="pdeM"
                     /locus_tag="VIC30_10795"
     CDS             complement(829..1548)
                     /gene="pdeM"
                     /locus_tag="VIC30_10795"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEY7804905.1"
                     /translation="MKPEVKQPTIMFGQHSLTLLPSGAIYCAALATLWVADVHLGKAA
                     TYRQLGQPVPQGTTTATLAQLSQDLQRYSVEHLVVLGDFLHGPQVHQSSSTLRAMAQW
                     REQHLSCEITLIRGNHDDRAGDPPQSLSIAVVDEPYALSGIACCHDKRSVAANDLPVL
                     WGHIHPVTVLKGRARERLRLPCFVVAPDHILLPAYGAFTGGHVYTPASDETLYVIADQ
                     SVLRLPGPASITRQGSPATDP"
     gene            complement(1538..>1875)
                     /locus_tag="VIC30_10800"
     CDS             complement(1538..>1875)
                     /locus_tag="VIC30_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011803776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HEY7804906.1"
                     /translation="VFQGYPGAKKTARQVQASSGLFFEVFRQYDPDNALLHQANQEVL
                     SQELDHQRLADTLTRLQAMPIKVQTLQRPTPFAFPLIVERLRERLSSEQLSDRVARLV
                     KDLERAIET"
BASE COUNT          434 a          529 c          497 g          415 t
ORIGIN      
        1 gcggcattgg ttattgtggg tgtatcgatc gtgaaccacc ctaggtccag ataaggaaac
       61 catcatgtgt ctggccgtgc ttgccattaa cgcccacccc gattggccac tgatcgtggc
      121 agccaatcgc gatgagtacc atgcccggcc cacacaagcc atgcatcctt ggtcagagaa
      181 tccgaacttg ctcgcaggca aagacttgct cgccggtggc acctggcttg gtgtgaccac
      241 ctcaggatgc ttcgcactgc tgaccaacgt acgtgacccc gcgcatcatc aacatcatgc
      301 gccctcgcgc ggcgcgctta ttccagactt tctgggcagc caacacgtca catcgcaata
      361 tctagagatg cttgcccaaa cagccaatca atacaacggc tttaatctca tcgcgcagca
      421 gcccgatggc cagatctggc atgcgtcgaa ctatcaaacg ccgtttgctc atcctatgcc
      481 agcaggtgtt catggcatct ccaatgcatt actgaacacc ccttggccta aaacccagcg
      541 caccaccgag gctttgaaag ctcgcctaat gtccactgcg tccattggct cggacgattt
      601 gtatgaggct ttaattggca tcatgcgtga caccacgccc atcgacgata cgctgttgcc
      661 atcgactggc attagtttgc cgcgcgaacg attgctggcc acgccgttta tcgtcagccc
      721 tgattacggt acgcgttgca gcacggttat attgcgacat cgcaatggga accagtgggt
      781 acaagaagac agttatgacg ctacaggcgc atgcattggg cgcctgcgct atgggtctgt
      841 cgcaggcgag ccttggcgcg ttatcgacgc tggacctggg agccttagca ccgattgatc
      901 ggcaatgacg tacagggttt cgtcactggc aggcgtatag acatgaccgc cggtaaaggc
      961 gccataagct ggcaagagaa tgtgatcagg cgcgaccaca aagcatggca gacgtaggcg
     1021 ttcacgtgcc ctgcccttga gcacagttac cgggtgtatg tgaccccata aaaccggtag
     1081 gtcgttagca gccacactgc gtttgtcatg acagcaggct atgccagaca acgcataggg
     1141 ttcatcaaca acagcgatgg acaggctttg gggtggatca cccgcgcggt catcgtgatt
     1201 gccgcggatc agcgttattt cacatgaaag gtgttgctca cgccattgcg ccatggctcg
     1261 caaagtcgat gacgactgat gcacttgcgg gccatgtagg aagtcgccaa gcaccaccaa
     1321 atgttcgact gaataacgct gtaagtcttg acttagttgc gccagtgtcg ccgtggtcgt
     1381 accttgcggc accggttgac ccaattgccg ataggttgca gctttaccca aatgcacatc
     1441 ggccacccaa agcgttgcaa gcgcggcaca ataaatcgcg ccggatggca aaagcgtgag
     1501 cgagtgctgc ccaaacataa tcgtcggctg tttgacctca ggtttcaatc gctcgctcca
     1561 agtctttgac caaacgtgct acccggtcgc tgagttgctc cgaactgagt cgttcacgca
     1621 atcgctcaac gatcaatgga aatgcaaaag gtgtgggtcg ttgtaaggtc tggactttaa
     1681 tcggcatcgc ctgcagtcgg gtcaaggtat cggctagacg ctggtgatca agctcttggc
     1741 ttaacacttc ctggtttgcc tggtgcaaca atgcgttgtc gggatcatat tgacgaaaca
     1801 cctcaaaaaa caaacccgac gaagcctgaa cctggcgagc ggttttttta gcgcctggat
     1861 agccttgaaa cacca
//
LOCUS       DATBNL010000635         3991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167396, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000635 DATBNL010000000
VERSION     DATBNL010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167396"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VIC30_10805"
     CDS             <1..385
                     /locus_tag="VIC30_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019656569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEY7804907.1"
                     /translation="GMDNVILTPHIGGSTMEAQESIGREVAEKLVTYSDNGTSVSSVN
                     FPEVALPAHPDKHRILHIHHNVPGILSAINQIFSDTGVNIAAQYLQTRGSVGYVVMDT
                     DKGHSGEALARLREVPGTIRTRILF"
     gene            415..1041
                     /locus_tag="VIC30_10810"
     CDS             415..1041
                     /locus_tag="VIC30_10810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEY7804908.1"
                     /translation="MELSTWLALFAASWAISVSPGAGAVAAMNAGLAHGFKRGYITTI
                     GLILGIMTQLVLVGAGLGAIVASSNIAFEAVKWFGVVYLIWLGISQWRAPLTEAKVQR
                     VQRRESARKMIAKGWLINAANPKGTVFLLAVVPQFMNLSEPLWPQYIIIGATLAFTDL
                     VVMAGYTALAARIFQYLKSPRHVQWLNRTFGGLFVLAGISLSLFKRGG"
     gene            1236..1682
                     /locus_tag="VIC30_10815"
     CDS             1236..1682
                     /locus_tag="VIC30_10815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009523672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEY7804909.1"
                     /translation="MTIDWANFTPWLSLAGGLMIGLATVMLMYFKGRVAGISGVIGSL
                     MQVRNAPPGHFSWRIAFILGLVLSSAIYGLFAVVPASQIDASYGLIVLAGLLVGFGTR
                     MGSGCTSGHAVCGLSRLSVRSIAATFSFMASGFVTAYIVFHVLGVA"
     gene            1682..2116
                     /locus_tag="VIC30_10820"
     CDS             1682..2116
                     /locus_tag="VIC30_10820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015865622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HEY7804910.1"
                     /translation="MQTFLVFLSGLVFGIGLIISGMSNPAKVINFLDIAGTWDPSLAF
                     VMLGAIPVAFVGFRFIEKQGQTAFNEPLHLPGTKSVNRSLVVGGFIFGAGWAIAGFCP
                     GPALVAMGAGYGKALLFVVAMIGGMLVHDHVYKRMVKEPQLA"
     gene            complement(2139..2858)
                     /locus_tag="VIC30_10825"
     CDS             complement(2139..2858)
                     /locus_tag="VIC30_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019428670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804911.1"
                     /translation="MHSLGNGYKALVIGAHGTIGAAFVDQLEADPTCAQVVTISRATH
                     PQFALESETGIEQTARAVAEQGPFALIIDATGALTIDGHGPEKHLGALNAERLARAFE
                     VNTIGPALLIKHFSPLLAKDHSIFAKLSARVGSISDNHKGGWYGYRAAKAALNMVLQT
                     AAIEMSRKRPDGIVAAMQPGTVQSPLSAPFSGGHDTVTPEEPAAGLLAALDSLHNPPG
                     SPPGSPSGAHFIDYKGQSIPW"
     gene            complement(2885..3754)
                     /locus_tag="VIC30_10830"
     CDS             complement(2885..3754)
                     /locus_tag="VIC30_10830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012417849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7804912.1"
                     /translation="MKRDILSIHLAAFLFGMTGILGTLIDANSDVITFGRALFAVLIL
                     TPILAWSAQQKQPQTANQTPTHTHLNLRYLVSGILLAIHWVTFFVSVKTAGVAIATLG
                     FSSFAAFITLIEWFIERRSISRSDWIRTIVVTVGLLLITPTLELADQATYGFAMGLLS
                     GLSFAGMAVFNSRLLANINPIRVARNQNVVVALVMAVLAIPLLPELSLTSWWWLAVLG
                     VFCTGLSHSLFVSSLKRLKVNIAGLVIALEPVYAIAAAWLLFTEVPALRTILGGLIIV
                     GAIVGVNYAKGKN"
BASE COUNT          831 a         1006 c         1175 g          979 t
ORIGIN      
        1 cggcatggac aatgtgatct taacgccgca cattggtggc tccaccatgg aagcacaaga
       61 aagcattggt cgcgaagtcg cagaaaaact ggttacctac agtgacaatg gcacgtcggt
      121 gtcctcagtt aacttccctg aggtggcctt gccagcgcac ccagacaagc accgtatctt
      181 gcatattcat cacaacgtgc cgggtatctt gtcggccatc aaccagatct tctctgacac
      241 gggagtgaac attgctgcgc aatacctgca gactcgggga tcggtgggct atgtggtgat
      301 ggacacagac aaagggcatt ctggtgaagc gctcgcacgc ttgcgtgaag tgccgggcac
      361 gatacgcacg cgtatcttgt tctaaccaca agctactcga acacgctacg caccatggaa
      421 ctgtccacct ggctggcttt gtttgccgcg tcttgggcca tcagcgtctc accgggcgcc
      481 ggtgcggttg cggccatgaa tgccggtctg gcgcacggtt ttaagcgcgg gtacatcacg
      541 accattggac tgattctggg catcatgact cagttggtgt tggtgggggc gggtcttggt
      601 gcaatcgtgg caagttccaa catagcgttt gaggcggtga agtggtttgg cgttgtctac
      661 ctgatctggc tcggtatttc tcagtggcga gcgccattga cagaggctaa agtgcagcgc
      721 gttcaacggc gcgagtcggc ccgcaagatg atcgctaaag gctggctcat taatgcggcc
      781 aatcccaaag gcacggtatt tctgttggcg gtggtgccgc agtttatgaa cctgagcgaa
      841 ccattgtggc cgcagtacat catcatcggc gccacactgg cgttcactga tttggtggtc
      901 atggccggtt acaccgcttt ggcggccaga atattccagt acctgaagtc cccgcgccac
      961 gtgcagtggt taaaccgcac attcggtggc ttgtttgtgc tggcagggat ctcgttgtct
     1021 ttgttcaaac gcggtggttg agataggggc taaggctgac gcgcaaaaga ctttctcaag
     1081 aaagttagac aacacgaaac tagcctaaac gccacacaaa aactcccaaa ccaagcgggc
     1141 acatcaaatg ccatcactag acacagcaat tcatgccaca ctaacgcttc aggaatttat
     1201 attctattta aatcactgct ttggaagggg taaacatgac catcgattgg gcaaacttca
     1261 cgccttggct gtcactggct ggaggcttga tgattggact ggccactgtc atgctgatgt
     1321 acttcaaagg tcgcgtggct ggtatcagtg gtgtcattgg ttcgctgatg caagtcagaa
     1381 acgcaccgcc cggacacttt agctggcgca tcgctttcat tcttggcttg gtgctctcga
     1441 gcgccattta tggcttgttt gcagttgtcc ctgcttcaca gatcgatgcg agctatgggc
     1501 tgattgtctt ggcgggtctg cttgtggggt ttggtacgcg catggggtca ggctgcacca
     1561 gcggtcacgc tgtttgtggg ttaagccgcc tgtcggtgcg ttcgattgct gcgaccttta
     1621 gcttcatggc cagtggattt gtcacagcct acatcgtgtt tcatgtgttg ggggtggcgt
     1681 gatgcaaacc ttcttagtct ttttatctgg tctggtattt ggcattggac tcatcatctc
     1741 tggcatgagt aatccggcca aggtgatcaa ctttctggat attgccggaa cctgggatcc
     1801 gagcttggcg ttcgtgatgc tcggtgctat ccccgtggcg tttgtcgggt ttcgtttcat
     1861 tgagaagcaa ggtcaaaccg catttaacga gccgttgcac ttgccgggca ccaagtcggt
     1921 gaataggtct ttggttgtgg gtggctttat ttttggggca gggtgggcga ttgctggctt
     1981 ctgcccaggc ccggcgttgg tggccatggg cgccggctac ggcaaggcac tgttgttcgt
     2041 ggtggccatg attggcggca tgttggtaca cgaccatgtt tataagcgca tggtcaaaga
     2101 accacagttg gcctgaacgg tcgtgaagcc ctgcagccct accaaggaat tgactggcct
     2161 ttgtagtcaa tgaagtgtgc acctgacggg ctgccgggcg ggctgcctgg cgggttgtgt
     2221 agggagtcta gggctgcgag caagccggcc gctggctctt ctggggtcac ggtgtcatgc
     2281 cccccagaaa acggtgctga cagcggtgac tgaaccgtac caggctgcat ggcagccaca
     2341 atgccatctg ggcgtttgcg gctcatttca atggccgcgg tctgcagcac catgttcagt
     2401 gcggctttgg ccgcgcgata gccgtaccag ccccccttgt gattgtcact gatgctaccc
     2461 acgcgggcag aaagcttggc aaatatggag tgatctttgg cgagcagggg gctgaagtgc
     2521 ttaatcagca acgccggtcc aatcgtgttg acttcaaagg cacgcgccaa gcgctcggcg
     2581 ttaagcgcac cgaggtgctt ttctgggcca tggccatcga tggttagtgc gcctgtggcg
     2641 tcaatgatca gcgcaaacgg gccttgctcc gccaccgctc gggcggtttg ctcaatgccg
     2701 gtctctgatt ccagtgcaaa ttgagggtgc gtggcacgtg agatagtgac cacttgagcg
     2761 caggtagggt cagcttcgag ctgatcaaca aacgcggcac cgatcgtgcc gtgcgcgcca
     2821 ataaccaacg ctttgtatcc attgcccagt gagtgcatgc tttttgtcct ttcgatgctc
     2881 agccttagtt tttgcctttg gcgtaattga caccaacgat ggcgcccaca atgatcaatc
     2941 cacccaagat ggtacgcaaa gccggcactt ccgtgaacag tagccatgcc gctgcaatgg
     3001 cgtagacggg ctcaagcgca atcaccaggc cggcaatgtt gaccttgagc cgctttaggc
     3061 ttgagacaaa cagcgaatgt gacagccccg tacaaaacac ccccaatacg gccaaccacc
     3121 accagcttgt gagtgacagt tcaggtagca agggaatcgc cagcaccgcc ataacgagtg
     3181 ccaccaccac gttttggttg cgtgccaccc gaatgggatt gatgttggct agcaggcgac
     3241 tgttaaaaac ggccatgccg gcaaacgaca gacctgagag cagtcccatc gcaaaaccat
     3301 aggttgcttg gtcagccaat tccagtgtgg gtgtgatcag cagcaagccc actgtgacca
     3361 caatggttcg tatccaatct gagcggctga tgctgcgacg ctcgatgaac cattcaatca
     3421 gggtgataaa tgccgcaaaa ctgctaaagc ccagcgtggc aatggccacg cctgcggttt
     3481 ttactgacac aaaaaacgtt acccaatgaa tcgccaataa gatgcctgaa acgagataac
     3541 gcaagttcag gtgggtgtgg gttggggtct ggttcgctgt ctgtggttgt ttttgctgag
     3601 ctgaccatgc caggatgggc gtcagaatca acaccgcgaa caaggcgcgc ccgaatgtga
     3661 tgacatcgct gttggcgtca atgagtgtgc ccaatatgcc cgtcatgcca aacagaaagg
     3721 cggcgaggtg aatgcttagg atgtcgcgtt tcaaggtgtc actcagaccg ttatcagttg
     3781 ttggttgcca atgaggcaag tatcttaaca ccaactatgt ttgctgcaga tttgattcgc
     3841 acttggtgcg aattcggtgt gagtgttgcg tgagagtgat gcgacggtgc cgtctgtaac
     3901 tgcggcaacg ttgtcagatg gcttattgcc tggcgtattt gtgtggtttg gttgtgtggt
     3961 ttggttgtgt ggtttggttg tgtggtttgg t
//
LOCUS       DATBNL010000636         1741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_137238, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000636 DATBNL010000000
VERSION     DATBNL010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137238"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..128)
                     /locus_tag="VIC30_10835"
     CDS             complement(<1..128)
                     /locus_tag="VIC30_10835"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416733.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEY7804913.1"
                     /translation="MEWVNAIDQFGAGLLGPTPWLVVWTLIKIIVIAVPVILSVAYL"
     gene            complement(128..>1741)
                     /locus_tag="VIC30_10840"
     CDS             complement(128..>1741)
                     /locus_tag="VIC30_10840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY7804914.1"
                     /translation="DEVMRIVPFENEEINECWISDRDRFAYEGLHEDRLTVPMIKGDD
                     GQWQEATWSDALQVVAKGLSQVRDEFGASQIGFVGSEQCTLEELSLLSRVAHGVGSPN
                     VDARARLTDPDWDSAMTGVPYLGMSIASLGELDRVLVVGSFMRADHPLMIQRLRQAAK
                     HGTQVSSIDLAADDPLLPLHARMTVSPIEMDRALAEVSVALAAAKGVEVPAALSGVTA
                     SDAALKIAQSLASGQNVAVLVGNAAMHSVNASQLAANAQWIAQQAGGKLGFLTAGANT
                     VGAYLAGATPKSAGQSVYQMLSEALQAYVVVNLEPQFDTSLGQRAVDTLKAAKFTVAL
                     TPYQSAASEWADVMLPVGPYTETSGTFVNAQGTPQSFKATVTPRGQSRPAWKVLRVLG
                     NLLNLPEFDEESSEAVRDAVLTGGITSKLSNEVSRAVGLSGLQAQGLQRVADVAIYRS
                     DAIVRRAEALQQTSASAAPSARIHPDTVERLGLSDASPVTVRTDSGHSVLSLKADKTV
                     APDCVRLPVGFELTAVLGPVDSPLQVERA"
BASE COUNT          444 a          521 c          418 g          358 t
ORIGIN      
        1 aggtacgcca cgctgagaat gactggcact gcgataacaa taatcttgat caacgtccaa
       61 accacgagcc atggtgtggg acccaagagc ccggcgccaa actgatcaat cgcgttaacc
      121 cactccatta ggcacgctcc acttgcaagg gtgaatcaac agggcctaaa acagccgtca
      181 gctcaaaacc cacaggcaaa cgcacacaat ctggcgcgac ggtcttatct gccttcaatg
      241 acaacactga atgaccactg tcggtacgaa ccgtaactgg cgaagcatct gacagcccaa
      301 gacgctcgac cgtatcggga tgaatacgag cacttggcgc agcactggcg ctggtttgtt
      361 gcaaagcttc agcacgacgc acaatggcat ccgaccgata gattgccacg tcggcaacgc
      421 gctgaagacc ctgggcttga agccctgaca atccaacagc acgactcact tcattactaa
      481 gcttggaggt gatgccgcca gtcagtaccg catcacgcac cgcttctgat gattcctcgt
      541 cgaactcagg caagttaagc aagttaccca aaacgcgtaa caccttccat gccggacggc
      601 tttgcccgcg cggcgttacc gtggccttaa aactctgcgg tgtgccctgc gcgttaacaa
      661 acgtaccaga cgtttccgtg taaggcccaa cgggcaacat cacatcggcc cattcgctgg
      721 cagccgactg ataaggcgtc agtgccaccg taaacttggc tgcctttaac gtatcaacag
      781 cgcgttgacc aagcgaagta tcaaactgcg gctcgaggtt aacgaccaca tatgcctgca
      841 atgcctctga aagcatctgg tacacagatt gaccagctga ttttggtgtt gcaccggcta
      901 aatacgcgcc aaccgtgttt gcgccagcgg ttaaaaatcc gagtttgcca cctgcctgct
      961 gggcaatcca ttgagcgttg gccgcaagtt gcgaggcatt aaccgaatgc atcgctgcat
     1021 ttcccaccaa cacggcgacg ttttgtccgc tagccaggct ttgagcaatt tttaatgccg
     1081 catccgatgc agtcacgccg ctaagtgccg caggcacctc cacacctttg gcagcagcca
     1141 aggccactga gacctcagct aaggcgcgat ccatttcaat tggtgaaacc gtcatgcgcg
     1201 catgtaacgg taacaacgga tcatcggcgg caagatcaat gctgctgact tgcgttccgt
     1261 gtttagcggc ctgacgcaaa cgctggatca ttagtgggtg atcggcacgc atgaacgaac
     1321 ccaccaccaa aactcgatcc aactcaccga ggctagcaat tgacatgccg agatacggca
     1381 caccagtcat ggctgaatcc caatcggggt ccgttaaacg ggcacgagca tccacgttag
     1441 ggctaccaac gccatgtgcg acacgtgaca ggagagaaag ctcttcaagc gtgcactgct
     1501 ccgaacccac aaaaccgatt tgtgaggcgc cgaactcatc acggacttgt gacaatcctt
     1561 tggcgactac ttgtaatgca tctgaccaag ttgcctcttg ccactgccca tcatcacctt
     1621 tgatcatggg aacagtcaga cggtcctcat gcagtccttc ataagcgaaa cgatcacggt
     1681 cactgatcca gcattcgttt atttcttcgt tttcaaacgg cacgatacgc atgacctcat
     1741 c
//
LOCUS       DATBNL010000637         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_127229, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000637 DATBNL010000000
VERSION     DATBNL010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127229"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VIC30_10845"
     CDS             complement(<1..548)
                     /locus_tag="VIC30_10845"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEY7804915.1"
                     /translation="MIDLPILLAFIGAATVLALTPGVDTAIVLNTAVTSGKRPALMAA
                     FGIGLGCLAWGAAVSVGLGSMLQASETAYNVVKYLGALYLLLFGLWLLAQPRSSSAAD
                     MPAQSHYGSWQAFTRGLIVNLLNPKVGIFYLTFLPQFIPEGKPVALYALLLASIHVLL
                     SMIWFVALIVATLPLGRFLRKPT"
     gene            complement(627..>2432)
                     /locus_tag="VIC30_10850"
     CDS             complement(627..>2432)
                     /locus_tag="VIC30_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020703205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC domain/YcaO domain-containing protein"
                     /protein_id="HEY7804916.1"
                     /translation="NLDADAQALLALESDSSVNTYIVGKDLPLEQTIANMSGVLANLG
                     VKIEIASWRNLIPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLSNNHFY
                     AGAFWGEDIATGTFVHYPSERWFKPGAGDSLPTEILDDYCRTIFNPDGELRGSHLIDT
                     NSGNVERGICALPYVRQSDGQTVYFPSNLIENLYVSNGMSAGNTLAEAQVQCLSEIFE
                     RAVKREIIEGEIALPDVPPAVLEKYPGILAGIAALEAQGYPVLVKDASLGGVYPVMCV
                     TLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPPPTFSSEVVTDTHN
                     FVEHFIDSSGIVSWRFFSAKADFEFVQWDFSCNGEHANAKEAAALFGILKTMGKEAYV
                     AVYDELGAVACRILVPGYSEIYPIDDLIWDNTNKALLFRTDILNLFQLSNTELSNLLH
                     QLENNELDEYSDIATLIGIEFDENTPWGQLTVLELKLLIHLALQQFEQALELVGAFLQ
                     YNDNTIERRLFYQAINAVLEILLDDELELNDYIVNLRRMFGNERMDAVIGSVNGTVKF
                     HGLTPTNSKLEGLERHQRLLDSYRKLHTARSKTTA"
BASE COUNT          650 a          614 c          615 g          553 t
ORIGIN      
        1 gtaggtttgc gaagaaaacg cccaagtggc agtgtcgcca caatcagcgc aacaaaccag
       61 atcatcgaca aaagcacatg aatgctcgcc aaaagcaaag catacagcgc aacaggctta
      121 ccctcgggta tgaactgcgg caaaaatgtc aggtaaaaaa tacccacctt gggattcagt
      181 aggttaacga taagcccccg agtaaacgcc tgccagctgc cgtaatggct ctgggctggc
      241 atgtccgcgg cgctgctcga acggggctgc gcgagcaacc aaaggccgaa taatagcaag
      301 tagagtgcgc caagatactt aacaacgttg taggccgttt ctgaagcctg caacattgaa
      361 cccagaccaa cggacacggc agccccccag gccaaacaac ccaagccgat cccaaacgct
      421 gccattaatg caggtcgttt gccgctcgtc acggcggtgt tcaacacgat ggccgtatcc
      481 acgcctggcg tgagcgctag aacagtggct gcgccgataa aggccagcaa gataggcaaa
      541 tcgatcatga atgaatgtta actgtcggaa caggcggctt tagaagcagg ggttttattg
      601 acgtttgata caaatcctat aagacgctag gccgttgttt tagacctcgc tgtgtgtaat
      661 ttccggtaac tatcgagcag gcgctgatgt cgttcaagtc cctctaactt cgagtttgtt
      721 ggggtgaggc cgtgaaattt gaccgtaccg ttaacggatc caataacggc gtccattctt
      781 tcgttgccga acattcgacg caaattgacg atgtagtcat taagctcaag ctcgtcatcg
      841 agcaagattt cgagcacagc gttgatggct tgatagaaca aacggcgctc gatggtgttg
      901 tcgttgtatt gcaaaaaagc acccaccaat tcgagcgctt gttcaaactg ctgcaaagcg
      961 aggtggatga ggagctttaa ttccagtacc gtcaattggc cccatggggt gttctcatcg
     1021 aactcgatgc caatcaaggt agcgatgtcg ctgtactcat ctagttcgtt gttttctaat
     1081 tgatgcaaaa ggttactgag ctcggtgttg cttaattgaa acaagttcaa gatgtccgta
     1141 cggaacagta gggccttgtt ggtgttgtcc caaatcagat catcaattgg gtagatctca
     1201 gagtagcctg gaactagtat tcgacaagcc acggcgccaa gctcatcgta gactgccaca
     1261 taagcctctt tacccatggt tttgaggatg ccgaataagg cagcggcttc tttggcattg
     1321 gcatgctcac cgttgcagga aaaatcccac tgaacaaact caaaatcagc tttggcgctg
     1381 aaaaagcgcc atgagacgat gccactggaa tcaatgaagt gttcaacaaa attgtgggta
     1441 tcagtgacaa cttcactgct aaatgtagga ggcggcagat cattgaggcc ttcaaagctg
     1501 cgaccttgaa gcaactcagt caaacttcgc tccaatgcca cctcaaaact tgggtgcgcc
     1561 ccaaacgaag caaagacacc gcccgttcgc ggattcatca gtgtcacaca catcaccgga
     1621 taaacaccac cgagcgaggc atccttcact aaaaccgggt agccctgtgc ctcgagcgct
     1681 gcgatgccgg cgaggatgcc agggtatttt tcaagaacgg ccggcggcac gtcgggcaag
     1741 gctatttcac cttcaatgat ctctcgtttg acggcccgct caaaaatctc agaaaggcac
     1801 tggacttgtg cttcggccaa ggtgttgccg gcactcatgc cgttactgac gtagaggttt
     1861 tctattaagt tagagggaaa gtagaccgtc tggccatcgg attggcgtac atacggcaag
     1921 gcacaaatac cgcgttcgac attgcctgag ttggtatcga tcagatgcga gccacgcagt
     1981 tcaccatctg ggttaaaaat agtccgacag tagtcatcca aaatctcagt cggtagcgag
     2041 tcaccagcac cgggtttgaa ccagcgctca ctggggtaat gaacaaatgt gccagtggca
     2101 atgtcttcac cccaaaaggc accagcataa aaatgattgt tgcttaaccg ctcaatgtat
     2161 tcaccaaggg ccgatgccaa ggcgctttcc ttggttgacc ctttgccatt ggtaaaacac
     2221 atcggtgagt gtgcgtcacg gatatgcaaa gaccatacgt tcgggatgag gttgcgccac
     2281 gaagcaattt caatcttgac gcctaggttc gctaacacgc ccgacatgtt ggcgattgtt
     2341 tgttcaagcg gcaggtcttt acccacaata taagtattca cgcttgagtc ggattcaagc
     2401 gcaagcagcg cttgagcatc agcgtctaag tt
//
LOCUS       DATBNL010000638         2662 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57393, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000638 DATBNL010000000
VERSION     DATBNL010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57393"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VIC30_10855"
     CDS             <1..404
                     /locus_tag="VIC30_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017234755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY7804917.1"
                     /translation="TLQAAYDNAGVRANCVAFIDDMAAAMGEADLVICRAGAMTVSEV
                     AVAGVAALFVPFPFAVDDHQTANAQYLATHDAAYLRQQRDLAIEWLARWLQAQSRSAL
                     QAVAIKAQEQAKPEATEAIGQRCLGLMEVQA"
     gene            401..1798
                     /gene="murC"
                     /locus_tag="VIC30_10860"
     CDS             401..1798
                     /gene="murC"
                     /locus_tag="VIC30_10860"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEY7804918.1"
                     /translation="MRHRIERIHFVGIGGSGMSGIAEVMLNLDYKVSGSDLATSAVTD
                     RLVALGAQISLGHDAAHVKDVDVVVTSTAVAGNNPEVLAARGAGIPVVPRAVMLAELM
                     RLKRGIAVAGTHGKTTTTSLVASVLAAAGLDPTFVIGGRLNAAGANAGLGQGEFLVAE
                     ADESDASFLNLLPVMAVVTNIDADHMDTYGHDIAKLKQAFIEFVQRLPFYGSAVVCVD
                     DANVREIMPLISRPILTYGLSEKAQIRATDLQAIYTTMQFNVHRKLVGKTHDILHVRL
                     NLPGLHNVHNALAAIAVATELGLPDGAIVGALAEFRGVGRRFSVSGPFAVPHGGEFML
                     VDDYGHHPVEMAATLAAARGAWPDRRVVLVFQPHRYTRTRDCFEDFVQVLNTADAVLL
                     TEVYAAGESPIVAADGRALARAVRVAGKIEPVFVPDVQALPQAMRSFAQDGDVFVVMG
                     AGSVSRVPAMMGESI"
     gene            1795..>2662
                     /locus_tag="VIC30_10865"
     CDS             1795..>2662
                     /locus_tag="VIC30_10865"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY7804919.1"
                     /translation="MNRPLTVEPVGNLGKVGVLYGGRSAEREVSLMSGQAVHQALLAE
                     GIDAHLFDPSQQGLGELAQAKFDRVFVALHGRFGEDGTIQGALELLGIPYTGSGHLAC
                     ALAMDKIMTKRLWEQSGLPTPNYRVVRQASDLDDLPQALGLPLILKAPNEGSTIGLAK
                     VTEREQLQTAYEDVRQFDDTILAERFVAGRELTVAVIGAGAQSMALPIVEIIAPGGNY
                     DYQSKYFSDETQYLCPAPVTETLQQQVSEIAVRAYQALACEGWARADLMLDADMKPWL
                     LEMNASPGMTGHS"
BASE COUNT          531 a          671 c          832 g          628 t
ORIGIN      
        1 agacattgca agcggcttat gacaatgccg gcgttcgggc caactgcgtg gcatttatcg
       61 atgacatggc agcggccatg ggcgaggcag acctggtgat atgtcgcgcc ggtgccatga
      121 ccgtgtccga agtagccgtg gccggtgttg ctgccctgtt tgtgcctttc ccgtttgcag
      181 tcgatgacca tcaaaccgct aacgcgcagt atttggccac gcatgatgca gcgtacctgc
      241 gccaacaacg cgacctggct attgaatggt tagcccgctg gttgcaagcg caatcgcgat
      301 cggcactaca agccgtggcg atcaaagcgc aagagcaggc caagcccgag gccactgaag
      361 cgattggcca gcgctgtctc ggtctcatgg aggtgcaagc atgagacatc gtatcgagcg
      421 cattcatttt gtggggattg gtggctcagg catgagcggt atcgccgagg taatgctgaa
      481 cctcgactac aaggtgtcag gatcggattt ggcgacatcg gctgtcactg acagactagt
      541 ggcattgggt gcgcagatta gcctcggtca cgatgccgct cacgtcaagg atgtcgacgt
      601 ggtggtcaca tcaacggcgg tcgctggcaa caaccctgag gtgttggcag cgcgtggtgc
      661 cggcatcccg gtggtgcctc gcgcggtgat gcttgccgaa ctgatgcgcc tgaaacgcgg
      721 tattgccgtg gctggtactc acggtaaaac cactaccacc agtctggtgg cgagtgtttt
      781 agcggccgca gggctagacc ccacctttgt gattggcggg cgactaaacg cagcaggtgc
      841 caatgcgggt ttgggtcagg gcgagttcct agtagcagaa gccgacgagt ctgatgcgtc
      901 gtttctaaat cttttgcctg tcatggcagt ggtgaccaac attgatgctg accacatgga
      961 tacgtatggt cacgacattg ccaaacttaa gcaagctttc atcgagtttg tgcagcgtct
     1021 gcctttttac ggtagcgcag tggtctgcgt cgatgatgcg aatgtacgag aaatcatgcc
     1081 tttgatttct cgcccgatac tcacttacgg gttgagcgag aaagcccaga ttcgtgccac
     1141 ggatctgcag gcaatttata ccaccatgca gttcaatgtt catcgaaagc tcgtcggtaa
     1201 gacccacgac atcttgcatg ttcgcttgaa tttgccaggg ctgcacaacg tgcataacgc
     1261 gcttgcagcc attgctgtgg ccaccgagtt gggcttacct gatggggcga tcgtcggtgc
     1321 cttggcggag tttcgtggtg ttggtcggcg ctttagtgtc tcgggtccgt ttgccgtgcc
     1381 acatggcggt gaattcatgc tcgtcgatga ttatggtcac cacccagtcg agatggccgc
     1441 gaccttggcg gccgcgcgtg gggcttggcc tgatcggcgc gtggtgctgg tgtttcagcc
     1501 gcaccgctat acgcgcaccc gtgattgctt tgaggatttt gtgcaagtgt tgaacacggc
     1561 cgatgcggtt ttattgactg aggtctatgc cgcaggcgag tcgccgatcg tggctgccga
     1621 cggtcgtgcg ttagcgcgtg cggtgcgcgt ggctggcaag atcgaaccgg tgtttgtacc
     1681 ggatgtacaa gcactgccgc aagcgatgcg atcgtttgcc caagacggtg atgtgtttgt
     1741 ggtgatgggg gcgggcagtg tgagccgtgt gcctgccatg atgggagagt caatatgaat
     1801 agaccgttga ccgtggagcc tgtgggcaac ttaggcaaag tcggtgtgct gtatggcgga
     1861 cggtctgctg agcgggaggt ctcgcttatg tcaggtcaag ccgtgcatca ggctttgctg
     1921 gcagaaggta ttgatgcgca tctgtttgat ccgagccaac aaggactcgg tgagcttgcg
     1981 caggcgaaat ttgatcgggt atttgtggca ttgcacggcc gttttggtga agatggcacc
     2041 atccaaggcg cgttggaatt gctcggcatt ccatatacag gcagcggcca tctggcctgc
     2101 gccttggcca tggacaaaat catgaccaag cgtctatggg agcaatccgg gctacctacg
     2161 ccaaactacc gagttgtgcg ccaagcgtct gacttggacg atttgcctca agcgttgggc
     2221 ttgcctttga ttttgaaagc acccaatgag ggttcaacca ttggcttggc caaggtgact
     2281 gaacgtgagc aactccaaac ggcttatgag gacgtacggc agttcgatga cacgattttg
     2341 gccgagcgat ttgttgcagg tcgcgaactg acggtggcgg tcatcggtgc cggtgcgcag
     2401 tcgatggcat tacccattgt ggaaattatc gcgccaggtg gtaactacga ttaccaaagc
     2461 aagtacttct ctgatgagac acagtatctg tgcccggctc ctgtgactga aaccttgcaa
     2521 caacaagtca gtgagattgc cgtacgcgct taccaggcgt tggcatgcga aggctgggcc
     2581 cgcgccgatt taatgctcga tgcggatatg aaaccctggt tacttgaaat gaacgcttcg
     2641 cctggcatga cgggtcactc gc
//
LOCUS       DATBNL010000639         2943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_7079, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000639 DATBNL010000000
VERSION     DATBNL010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7079"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /gene="gshA"
                     /locus_tag="VIC30_10870"
     CDS             complement(<1..1145)
                     /gene="gshA"
                     /locus_tag="VIC30_10870"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006227221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEY7804920.1"
                     /translation="MLTHCQRGIEKEGLRVDPQGWLSTRAHPLALGSALTHPHITTDY
                     SEALLELITGVHKSAQGVLDELNWVHRLAMTGLGDELLWNHSMPCLLPAEPDIPIAWY
                     GNSNTGMLKHVYRRGLAVRYGKLMQCIAGLHYNVSLPDALWHHTGLFPDQGSDAQSEG
                     YVGLIRNFVRHSWLLMYLFGASPAVSTNFLRGDLDHGLQTLNPTTAYLPWATSLRMSD
                     LGYQSKAQATLKLCYNDLPTFLDRLYTAVTTPWPDYEAIGTQRDGQWLQLNCNLLQIE
                     NEYYSTIRPKRTTGRGERPITALAERGVQYIEVRCLDIDPFEPAGISSQTIKFMDAFL
                     LFCALEHSPSFGDDGYCVESAQNFNAVVARGRQPGLALYRGGVPVGL"
     gene            1306..1833
                     /locus_tag="VIC30_10875"
     CDS             1306..1833
                     /locus_tag="VIC30_10875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804921.1"
                     /translation="MFNSPVFPALFFKRFFILASVLLLSACYPTYNWRELPVADGLAT
                     LAFPGKVDTVKRDIELAGMPVTFVLTTTEVNDTVFSIGWAQLPLQSTAEQRQAAQASL
                     VESLAASMDQPAPEIAMTGEMFRLESARDGKALAMVARVLVHYDVAMRVVATGPPELL
                     TEEVSQNFIRSLELK"
     gene            complement(1808..2038)
                     /locus_tag="VIC30_10880"
     CDS             complement(1808..2038)
                     /locus_tag="VIC30_10880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7804922.1"
                     /translation="MIHTPLTRRELQCLAWVSRGKTSWETATILGLSERTVNFHLRNA
                     SRKLNVYGRQACVARAIHLGLLEPFTSAPVSG"
     gene            2147..>2943
                     /locus_tag="VIC30_10885"
     CDS             2147..>2943
                     /locus_tag="VIC30_10885"
                     /inference="COORDINATES: protein motif:HMM:NF015509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEY7804923.1"
                     /translation="MSILLSAYLAMLIRLMPMVVCVVVGFIWGRRDQPYPTSFVSTLV
                     TYVAIPALTFHTLMTTPLDAGTMTWVLTLSVAALLVAGVVVAIMLRLMGLSGRDLGQT
                     AWIPNAGNLGLPMAELVFGIEGLSIAIAFFAASSFVSFTLGLRWLTGSAGKVWRQPVV
                     WATLLGIGLRALDVEAPQWSLQSGALLGSMAVPLMLVTLGHTLSKLPRSGFKAGTGVM
                     LTRFASGIVVALLLFAPIGIDPLIAAPIALQMLMPCAVNSYLFARLHG"
BASE COUNT          620 a          786 c          836 g          701 t
ORIGIN      
        1 tctagaccaa cgggtacgcc tcccctgtaa agagccaatc ctggctggcg cccgcgcgcc
       61 accacggcat taaagttttg tgcactctca acgcagtagc catcgtcacc gaatgaaggg
      121 ctgtgttcaa gcgcacaaaa caacaaaaac gcatccatga attttatggt ttgcgatgaa
      181 ataccggcag gctcgaacgg gtcaatatca aggcagcgta cttcaatgta ctgaacgccg
      241 cgctctgcaa gcgcagtaat cggacgctca ccacgcccag tggtacgttt ggggcgaatc
      301 gttgagtaat attcgttctc tatttgcagc aagttgcaat tgagctgcaa ccactggccg
      361 tcgcgctggg taccaatggc ctcgtaatcg ggccaaggcg ttgtgactgc tgtgtagagg
      421 cgatcaagaa acgttggcag gtcgttgtag caaagcttga gcgtggcctg ggccttgctt
      481 tggtaaccaa ggtcactcat gcgcaggctg gttgcccagg gtaggtaggc cgtggttggg
      541 ttaagcgttt gcaaaccgtg atcgagatcg ccccgcaaaa aattggtcga gaccgcgggc
      601 gaggcgccaa ataggtacat caacagccag ctatgacgca caaagttgcg aatcagaccg
      661 acatagcctt cagattgtgc atccgagcct tgatcaggga atagaccggt gtgatgccac
      721 aacgcgtctg gtaatgacac gttgtagtgc aagccggcaa tacactgcat gagtttgccg
      781 tagcgaacag cgaggccgcg ccggtagacg tgcttgagca tgcccgtatt ggaattgcca
      841 taccaggcaa tagggatgtc aggctcagct ggcaacaggc acggcatgga gtgattccac
      901 agcaactcat cgcctaaacc cgtcatggcc agtcggtgca cccaattcag ttcatccaga
      961 accccctggg cacttttgtg cacaccggtg atgagctcta gcaacgcctc ggagtaatcc
     1021 gttgtaatgt gagggtgtgt tagcgcactg ccaagagcca acggatgggc tcgtgtcgat
     1081 aaccagccct ggggatcaac acgcaagccc tctttttcta tgccacgttg acagtgtgtc
     1141 agcatgccgg attcttgcga cagcaagcgc aagcgttcgt gaagtgtaga ggccaaccac
     1201 catccccaat tcgtcattaa aatcgcggta accgcgtcag aatttcaatt gtacggcacc
     1261 tgttaggtgc acttctgaca tcagcaaagc atttaaggac cccgcgtgtt caatagcccc
     1321 gtatttcctg cgttattttt caaacgattt ttcatactgg ccagtgtgtt gctgctgtca
     1381 gcgtgctacc cgacctataa ctggcgcgaa ctgccagtgg ccgatggctt agccacgttg
     1441 gcctttccgg gcaaagtcga tacggtaaag cgcgacatcg agcttgccgg tatgccagtg
     1501 acctttgtgt tgaccacaac cgaggtcaat gacacggtgt tctcgattgg ttgggcgcaa
     1561 ctgcccttgc aaagcacagc tgaacaacgc caggcagcac aggcttcctt ggttgagtct
     1621 ctagccgcga gcatggatca gcctgcgccc gagatcgcca tgacaggcga gatgtttcgc
     1681 ctcgagagcg ctcgcgacgg caaagcgctc gccatggtgg cgcgcgtgtt ggtgcactat
     1741 gacgtggcga tgcgcgtggt tgccactggc ccgcccgagc tgttgaccga ggaggtgtca
     1801 caaaacttca tccgctcact ggagctgaag taaacggctc aagcagtcct agatgaatgg
     1861 cgcgagccac gcaagcttgc ctgccgtaga cattgagctt acggctggca ttgcgcaaat
     1921 ggaaattgac ggtgcgttcg cttaagccca gaatcgtcgc ggtctcccag ctggttttac
     1981 cgcgagacac ccatgccagg cattgcagct ctcgcctggt taaaggtgtg tgaatcatat
     2041 gtttaacctc tgactacatc gaagaaggaa caacgtgcga cagtttgact gcagttgttc
     2101 tatttgttaa tccgcaaaat cccgtaacaa acttttacat ttgcccatga gcatcctcct
     2161 gtccgcctac ctcgccatgt tgatcagact catgccaatg gtagtttgtg tggtggtcgg
     2221 ttttatatgg gggcgacgcg atcagcccta ccccacgtct tttgtttcaa ccttagtgac
     2281 ctatgtggcc atcccggcgt tgacgtttca cacgctaatg accacgccac tggatgccgg
     2341 taccatgacg tgggtgctga ccctgtctgt agccgcactg ttggtcgcag gagtcgtggt
     2401 tgcaatcatg ttgcgcctga tgggtttgtc gggtcgcgac cttgggcaaa cggcctggat
     2461 tcccaatgcc ggtaatctag gtctgcccat ggccgagttg gtgttcggca ttgaagggct
     2521 gtcgattgcg attgcatttt ttgcggcatc gtcgtttgtg agtttcacct tgggtttgcg
     2581 ctggctcacg ggctcggctg gcaaggtctg gcgccagcca gtggtgtggg cgacgttgct
     2641 tggcatcggt ttgcgggcac ttgatgtcga ggcgccgcag tggtcactgc aaagcggtgc
     2701 gctcttgggc agcatggctg tgcctttgat gctcgtgacg ctaggccaca cgctgtcaaa
     2761 actgccgcgt tctggtttta aagctggcac aggtgtgatg ctgacccgtt tcgcaagcgg
     2821 aatcgtggtg gctttgttgt tgttcgcacc gattggtatc gatcctttaa tcgccgcgcc
     2881 catcgctttg cagatgctca tgccatgcgc ggtcaacagt tatctgtttg cgcggctgca
     2941 tgg
//
LOCUS       DATBNL010000640         2355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_27496, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000640 DATBNL010000000
VERSION     DATBNL010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27496"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VIC30_10890"
     CDS             <1..1020
                     /locus_tag="VIC30_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012357108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7804924.1"
                     /translation="LGKEIILTSADTQSKADLSSSKAREMFERDNVDMIVGNVSTASA
                     LAAMEVAEQMKRVALVTGAASLPITNERCNAYTVHWVYDTYALAHGTGDAVVATGKKT
                     WFFVTADYAFGHTLERDTSEVVLAAGGEVLGNVKHPIKTTDFTSYLAQAQGSGAQVIG
                     LANAGGDTIGSIKQASELGIMGSDQTVVPLLMFSADIQALGLQDTQGMNFTVGWYWDY
                     NDANRQFAERFMEKFNGKAPTSVQAGVYSATLNYLKAIEAVGTDDSDKVMEYLKSTEI
                     DDGLFKGTIRQDGKFAHDMYLLQVKSPAESKGPNDIASVVRVIPAAQASLPLDQSKCK
                     LVTGS"
     gene            1044..1958
                     /locus_tag="VIC30_10895"
     CDS             1044..1958
                     /locus_tag="VIC30_10895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012357109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7804925.1"
                     /translation="MFELLGIHPQVFMAQIMIGLINGSFYALLSLGLAVIFGLLNVIN
                     FTHGALYMLGAMVTWIGLTKLGPWLGMPELQVPYLAALVLAPLVVGAFSIVIEKTMLK
                     RLYHLDHLYGLLLTFGLALVLEGLFRHWFGVLGNSYPVPDMFRGGMRVNNIFIPYYRL
                     WVVVAALTVCFATWFFIERTKLGSLLRAGTENPRLLQALGVNVPLIITLTYGAGCALA
                     AFAGVLAAPIYQVTAVMGSELIIVVFAVVVIGGMGSIAGSILTGLGLGVVEGLTKVFY
                     PEASSVSIFVIMIIVLLLKPAGLFGKVR"
     gene            1972..>2355
                     /locus_tag="VIC30_10900"
     CDS             1972..>2355
                     /locus_tag="VIC30_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7804926.1"
                     /translation="MNTSAFNKLTIVIFVLLALIPFQDMVYDLFMMKVFCFAIFAAAL
                     NLLLGYAGLLSFGHAAFFGSASYVTAHVMKEWGVTPEIGLLIGVICSTALGYVFGSLA
                     IRRQGIYFAMITLALAQIIYFIATQA"
BASE COUNT          486 a          606 c          633 g          630 t
ORIGIN      
        1 ctcggcaagg agattattct cacctcagcc gacacacagt ccaaagctga cctttcaagc
       61 tcaaaagccc gtgaaatgtt cgagcgcgac aatgtcgaca tgatcgtggg taacgtgtca
      121 acagcttcag ccttggccgc catggaagtg gctgaacaga tgaagcgtgt cgcactggtc
      181 acaggcgcgg cttcactgcc catcaccaac gaacgttgca atgcctacac cgtgcactgg
      241 gtgtatgaca cctacgcttt ggcacacggc accggtgacg ctgtggttgc aaccggtaaa
      301 aaaacttggt tcttcgtgac ggctgactac gcgtttggtc acacgcttga gcgtgacacc
      361 tcagaagtcg tgctcgctgc cggtggtgaa gtgctcggta acgtcaagca ccctattaag
      421 acaactgact tcacgtctta cctggctcag gctcaaggct caggcgctca agtcatcggt
      481 ttggcaaacg ctggtggtga cacaatcggt tcgattaagc aagcttccga gcttggcatc
      541 atgggttcag accagacggt tgtgccattg ctgatgttct cagctgacat tcaagcgttg
      601 ggcttgcaag acacccaagg catgaacttc acagtcggtt ggtactggga ctacaacgac
      661 gccaaccgtc agtttgctga gcgcttcatg gagaagttca acggcaaggc gcctacgtca
      721 gtgcaagctg gtgtttactc agccacgctt aactacctca aggccattga ggccgttggt
      781 accgatgatt cagacaaagt catggaatat ctgaagtcca cagaaatcga cgatggccta
      841 ttcaaaggca ccattcgcca ggatggcaag ttcgcccacg acatgtacct cttgcaggtc
      901 aagtcaccag ccgagtcaaa aggacctaac gacatcgcgt cagtggtccg tgtcattcct
      961 gccgcacagg cctcattgcc cttggatcag tccaagtgca agctggtcac cggttcttga
     1021 taggaaggta ggagagaacg atcatgtttg agttgcttgg tattcatccg caagtcttta
     1081 tggcccaaat tatgattggg ctcattaacg gctcgtttta tgcactgttg agcttgggac
     1141 tagcggtgat tttcgggcta ctcaacgtga tcaacttcac gcatggcgcc ctttacatgt
     1201 tgggcgccat ggtgacctgg attggtttga ccaaactagg tccctggctc ggtatgccag
     1261 aactgcaggt gccttatttg gcagctctgg ttctggcacc attggtggtc ggtgccttta
     1321 gtatcgtcat tgaaaaaacg atgctaaagc gcctctatca cctcgatcac ctctatggcc
     1381 tgttgctgac atttggcttg gcattggtac tcgaaggatt attccgtcac tggttcggcg
     1441 tgctgggtaa cagttacccc gtgcctgaca tgttccgcgg cggcatgcgc gtgaacaaca
     1501 tctttattcc ttactaccgc ctctgggttg tagtggctgc gctgacggtc tgttttgcga
     1561 cgtggttctt tattgagcgc accaagcttg gcagtttgtt gcgcgccggt acagagaacc
     1621 ctcgcctgct gcaggcgctt ggtgtgaacg tgccactgat cattactttg acctacggtg
     1681 ctggctgtgc actggccgca ttcgctggcg tgctggctgc accgatttat caggtcaccg
     1741 ctgtcatggg gtctgagctc atcatcgtgg tgtttgccgt ggtggtcatt ggtggcatgg
     1801 ggtccattgc gggatcgata ttgactggac taggactcgg tgttgtcgaa ggtctgacga
     1861 aggtttttta ccctgaagct tcctcggtct caatctttgt gatcatgatt attgtgctgt
     1921 tgctcaagcc cgccgggctg tttggcaaag ttcgctaaaa ggcccccgac catgaacact
     1981 tctgcattca acaaactcac catcgttatc tttgtgctgc tggcgctgat tcccttccaa
     2041 gacatggtct atgacctgtt catgatgaag gtgttctgtt ttgcgatttt tgcagcggca
     2101 ctgaacttgc tactgggtta tgccggtttg ctgtctttcg gtcatgcggc gttttttgga
     2161 tcggcgtcgt atgtcacggc acacgtcatg aaagaatggg gcgtgacacc tgaaataggc
     2221 ttactcatcg gtgtgatctg ttccaccgca ctgggctatg tgtttggctc gctggccatt
     2281 cgtcgtcaag gtatttactt tgcgatgatc acgctggcac tggcacaaat catctacttt
     2341 attgccacac aggca
//
LOCUS       DATBNL010000641         3184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167437, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000641 DATBNL010000000
VERSION     DATBNL010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167437"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /locus_tag="VIC30_10905"
     CDS             <1..1093
                     /locus_tag="VIC30_10905"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEY7804927.1"
                     /translation="VIWNFGTWWLGIPNSTTHAYIGSIIGIAMADAFLHGNSMAAQIN
                     WHQGEKIMIALIVSPIVGFVLGYILLKLIRLVAKDNKELYRPVEPGEKPSTGIRGVLI
                     AGAAGVSLMHGSNDGQKSIGLMMIILFGLFPAVYGLDPDRLDTKDYQEMQQAVVQIQD
                     VAKKLDDQKLIDSTTSLLNHLENDPHQVGGTDEGAVDTRKQILRAHAEITAVLKDDNL
                     SSKIDANELQQLEYAHTLMRDFVEHVPFWIILLSALALGGGTAIGYKRIVTTLGEKMG
                     SSRMNPAQGTAAQISAVLSIGMADAGGLPVSTTHVLSSSVIGTVSATPHQKINTNTLA
                     RIALTWVTTLPGTVILSFALGIAFHAAFG"
     gene            complement(1220..2224)
                     /gene="egtD"
                     /locus_tag="VIC30_10910"
     CDS             complement(1220..2224)
                     /gene="egtD"
                     /locus_tag="VIC30_10910"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:NF021530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEY7804928.1"
                     /translation="MSMTSAQTITTSTTETSTSAADLEQALVDALNHPYHSISSAWLY
                     DQRGSELFEEITQLPTYYPTRTEIGILEENLDAIASAIGADSLVVELGSGSSRKTVPV
                     LNALNQPAGYVPVDISADYLYQASADLVKKLPKLPNRPNLPVIPLVADFTTEFELPPS
                     LPPHTSRLGFFPGSTIGNLTVQAAQTLLRRCHALLGDGAAFLIGIDLDKSPDVLIPAY
                     DDPEGVTAAFNRNLLTRLNRELGVAIDVDAFAHEARYFADPARIEMHLVASCDQTIEV
                     AGQVFTLAAGDSLHTEMSHKYTIEGFKQLAKEAGWQLTQHWTDSQSRFALLLLHSSTQ
                     "
     gene            complement(2280..>3184)
                     /locus_tag="VIC30_10915"
     CDS             complement(2280..>3184)
                     /locus_tag="VIC30_10915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804929.1"
                     /translation="VGMPTLGFYLESAYGEGQYGEVGMLLILFLVLIASLKLWVRPKL
                     VVAYLLAAPFFLGTGLPIVWGNATRFLTEDIVPAPLRNGEGLAGLGPWLGDLLWNQAL
                     PGIGTTLVLTQIALVATGVIALVTFPLISRLFVGRTAQIGGHGLLIIGRSIPEYLLAY
                     VLLQLWGPSMLPAVVALAIHNGAIIGHLIGRQSNNLILRPDAISGLNRYFYEVVPRLY
                     RSFLAFLLYRWEIVMRETAILGILGITTLGFYVDSAIEELRFDRAMVLILVTALLNIG
                     VDGLARAIRGHLQLRTTPTAQTPP"
BASE COUNT          803 a          860 c          836 g          685 t
ORIGIN      
        1 tgtcatttgg aacttcggca cctggtggtt aggcattccc aactccacca cgcatgccta
       61 cattggatcc atcattggta ttgccatggc cgatgccttc ttgcacggca attcaatggc
      121 cgcgcaaatc aactggcacc aaggtgagaa gatcatgatt gccttgatcg tgtcaccaat
      181 cgttggtttc gtgctcgggt atatcttgct caagctcatt cgactcgttg ccaaagacaa
      241 caaggagcta tatcgtcctg tcgagccggg agaaaaaccg agcaccggca ttcgcggcgt
      301 actgattgcc ggtgccgctg gcgtgagctt gatgcacggc tccaacgacg gacaaaaaag
      361 tattggtttg atgatgatca tcctgtttgg tctgttccca gccgtatacg gcttggatcc
      421 tgatcgtctt gacaccaaag attatcaaga gatgcagcaa gctgtggttc agattcaaga
      481 tgttgccaaa aaactcgatg accaaaagct gattgactcg accacgagct tactcaacca
      541 cctagaaaat gacccacacc aagtcggtgg aaccgacgaa ggtgcagtcg acacacgtaa
      601 gcagatctta cgcgcccacg ctgagataac cgccgtactc aaagacgaca acctctcaag
      661 caaaatagat gccaatgaat tgcagcaact cgaatatgcg cacactttga tgcgtgactt
      721 cgtggagcac gtgccgttct ggatcatctt actctcggcc ttggcacttg gtggtggtac
      781 agcgatcggt tacaagcgca tcgtcaccac ccttggtgag aagatgggga gttcacgcat
      841 gaaccccgcg caaggtacgg cggcgcaaat ctcagcggta ctcagtatcg gcatggctga
      901 tgctggtggt ttgccggtta gtaccactca cgtgttgtcc tcttcggtca tcggcacggt
      961 atcggccaca ccgcaccaga agatcaacac caacacgctg gcccgtatcg ctttgacttg
     1021 ggtaaccaca ctgccaggca ccgtgatcct gtccttcgcg ctggggattg cgtttcatgc
     1081 ggcatttggc taagcaaggc cagtagcgaa gttcgggacg caggttttaa taagacccca
     1141 tcaagcggtc acttcggtga ccgctttttt tacgcggtgt gctgggccaa gccacacacc
     1201 ccgcaaaccc agcaagcgtc tattgtgtgc tcgagtgcaa cagcaacaac gcaaaacggc
     1261 tctgtgaatc cgtccaatgc tgggtcaatt gccagccggc ctctttggct agctgcttaa
     1321 aaccctcaat cgtatatttg tgtgacatct cggtatgcaa actgtcgccg gcggctagag
     1381 tgaaaacctg acccgccacc tcaatcgtct gatcgcacga agccaccaag tgcatttcaa
     1441 tacgcgccgg atccgcaaaa tagcgtgcct cgtgtgcaaa ggcgtcaaca tcaatcgcga
     1501 ccccaagctc tcggtttaaa cgtgttagca agttgcggtt aaacgccgct gtcacacctt
     1561 ctgggtcgtc gtaggcggga atgagtacat cgggtgactt atcaagatca ataccgatta
     1621 aaaaggcagc accgtcacca agtagcgcat ggcaacgtcg cagtagtgtt tgagccgctt
     1681 gcacggtgag gttaccaatc gtcgagccag gaaaaaaccc caagcggctg gtgtggggtg
     1741 gcagcgatgg cggcaactcg aactcggttg taaagtcagc caccaacgga atgaccggca
     1801 ggtttggccg attcggtagt ttcggtagct ttttcaccag atctgcgctg gcttgataga
     1861 gatagtcagc cgagatatcg acaggcacat aaccggctgg ttggttaagc gcattgagga
     1921 cggggacggt tttgcggctt gaaccactgc caagctccac aaccaagctg tcagcgccga
     1981 tcgcgctagc aatggcatcc aagttctctt cgagaatgcc gatctcagta cgagttggat
     2041 aataggtggg taattgggtg atttcctcaa acagctctga gccgcgttgg tcataaagcc
     2101 aagccgacga gatgctgtga tacgggtgat tcaaggcatc aacgagtgct tgctcaaggt
     2161 cggcggcgct cgttgatgtc tctgtggttg acgttgttat agtctgagca ctggtcatgg
     2221 acatggatag atagccttaa ggttggagtg gttttgaggc gcagtgttta tggtggtgtt
     2281 cacggtggtg tctgggctgt tggcgtggtg cgcagttgca agtgcccgcg aatggcacgt
     2341 gcaagtccat ccacaccgat attgagcaac gcggttacaa gaatgagcac catcgcccga
     2401 tcaaaccgca gttcctcgat ggcactatcg acgtagaaac caagcgttgt gattcccaaa
     2461 ataccaagaa tggctgtctc gcgcatgaca atttcccatc gatacagcaa aaaggcgaga
     2521 aacgagcgat acagccttgg cacgacttcg tagaaatagc gattcagccc actgatagca
     2581 tcaggtctga gtatcaagtt attgctttga cgaccaatca agtggccaat gatggcaccg
     2641 ttgtgaatcg ccaacgccac cacagcgggc aacatcgacg ggccccagag ctgcaacaaa
     2701 acatacgcta gcaaatactc tgggatcgag cgcccaatga ttaacaaacc atgcccgcct
     2761 atctgagcag tgcggccaac aaacagtcga gatattagtg ggaacgtgac taacgcaatg
     2821 acaccggtgg ccaccaacgc aatttgggtg agcacaagcg tcgtaccaat ccctggtaac
     2881 gcttggttcc acagaagatc gcccaaccag ggaccaagac ctgcgagccc ctcgccgttg
     2941 cgcagtggcg ccggaacaat atcctcagtc aaaaagcgtg tggcattacc ccacacgatc
     3001 ggcagccccg tacccagaaa gaagggtgca gcaagcaggt aggcaaccac caatttgggg
     3061 cgcacccaga gctttaagct tgcaatcagc accaaaaaca agatcagcaa cataccgacc
     3121 tcgccgtatt gcccctcacc gtaggcgctt tccagataaa accccagcgt gggcataccc
     3181 acaa
//
LOCUS       DATBNL010000642         3513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_185789, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000642 DATBNL010000000
VERSION     DATBNL010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3513
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185789"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1129)
                     /gene="ribA"
                     /locus_tag="VIC30_10920"
     CDS             complement(<1..1129)
                     /gene="ribA"
                     /locus_tag="VIC30_10920"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF001591.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEY7804930.1"
                     /translation="MDSSAANLDPLSGVSNALSNLDRAAHELRRGDAVVVQSSQGRFA
                     LVAGEAVNALILSNLQSRHKAWHLTVTGQRAVRIGFEVDAQDSVYQITPNQGLSELDL
                     HKLIDPTAGLGAKANADTPSFKDRCQISPGDHVDGAAILLLKHAGLLPACIVTPVGKD
                     ELPLAVQITDADIRLGISEHRESLHVVGQARVPLEDAEDVKIISFRPQDGSTEHMAII
                     VGQPDLTKPVLVRLHSECFTGDLLGSLRCDCGSQLRGAISLMGATEGGILLYLAQEGR
                     GIGLVNKLRAYQLQDAGRDTVDANFDLGFEEDERDYMPAVQMLKHLNVRQVRVLTNNP
                     RKVNALSRLGLNVVERVAHVFPANHHNRGYLMTKGTRGGHLF"
     gene            1214..1954
                     /locus_tag="VIC30_10925"
     CDS             1214..1954
                     /locus_tag="VIC30_10925"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HEY7804931.1"
                     /translation="MAWFNRKGCRYWMMMKLDKQTELAWEPQQLEPGQDGLIVIGQLG
                     QSLDGQIATATGHSKYINGQGGLEHLHRLRAWADVVVVGVGTVVADDPKLTVRLVNGR
                     DPDRVVIDPNARVPFQAGCLQEAPVRRLVLTRVDAELQDWPPGVEQMSIQTEPDEQRL
                     PPQQVREWLAKQGWQRVLIEGGASTLAGFLSAGCLDYLHLITSPVLLGPGTAGVQGVP
                     VPDLSLAPRFRVQPFALGDDLLMVCAFG"
     gene            complement(1932..3029)
                     /locus_tag="VIC30_10930"
     CDS             complement(1932..3029)
                     /locus_tag="VIC30_10930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY7804932.1"
                     /translation="MARRLTLALPGDINTLTGGYLYDKHVSKELAEQGWDVDILSLDA
                     GFPFVDDAVKQATVQRLAAVAPDRDLVIDGLALGALGEHAQAIKLRRAFVALVHHPLA
                     LESGLTAHAAQKLHTSERVALSAASGVIVTSPTTCQTLIDQYGVAAHQIEVIEPGVDR
                     PRVSPSALPHRSPPKPGVNDTNTPLKLLSVGAIVPRKGFDVLIQALSQLADLPWTLDI
                     VGDDQRAAETVAQLKTLIAQYGLTDRVQLLGAQPREALNRHYQQADVFVLASHYEGYG
                     MAYAEALAWGLPTIGTDGGASAQTLDTPAARVVPANDAPSLAMTLRELMNNPQKRADM
                     RAAALKHANALPTWESVGERFARALNRMRTP"
     gene            complement(3014..3424)
                     /locus_tag="VIC30_10935"
     CDS             complement(3014..3424)
                     /locus_tag="VIC30_10935"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEY7804933.1"
                     /translation="MFAVEVRDHIMIAHSFKGEVFGPAQKLHGATFVIDAAIYAETLD
                     DNAIVIDIARAHEVLKSLLAPLNYKNLDEEPAFKGQNTTTEFLTKHLFDGLAKAARAG
                     ELGRDGKQLHSIRVEIAESHVARASYEQRLWPAD"
BASE COUNT          724 a          939 c         1052 g          798 t
ORIGIN      
        1 caaagaggtg tccgccacgc gtgcccttgg tcattagata accgcggttg tgatgattgg
       61 cgggaaacac gtgggccacg cgctcaacga cattcaaacc cagacggctt agcgcgttaa
      121 ctttacgcgg gttgttggta agcacacgca cttgcctgac gtttaagtgt ttaagcatct
      181 gcacagcagg catgtagtcg cgctcgtcct cttcaaaccc cagatcaaag ttggcatcca
      241 cggtgtcgcg tccggcgtct tgcaactggt aggcccgcag cttgttgact aagccaatgc
      301 cacgaccttc ttgcgctagg tacaacaaaa tcccaccttc ggtggcaccc atcaaagaaa
      361 tcgcaccgcg cagctggctg ccgcagtcgc aacgcaaaga acccaacaag tcaccggtaa
      421 aacattccga atgcagtcta acgagcacag gtttggtcaa gtcgggctga cccacaatga
      481 tggccatgtg ttcggtgctg ccatcttgag gcctgaagga aatgattttg acgtcttcgg
      541 cgtcttcgag cggcacacgg gcttggccta cgacgtgcaa agactcccgg tgttctgaga
      601 tacccagccg gatgtcggca tcagtgatct gcaccgcaag tggtaactcg tccttgccaa
      661 cgggtgtgac gatgcatgcg ggtaggagac ctgcatgttt aagcaacaaa atcgctgcac
      721 catcgacatg gtcgcctggg ctgatttggc agcggtcttt aaatgatggg gtgtcggcat
      781 tggctttggc acccaaacca gccgtggggt cgatgagctt gtgcaaatca agttcactta
      841 agccttgatt tggggtgatc tgatagaccg agtcttgcgc gtcaacttca aatccaatgc
      901 gaaccgcacg ttggccggtg acagttagat gccaagcttt gtggcgactt tgcaggtttg
      961 acagtatcag ggcgttgacg gcttcgccgg ccaccaaggc aaagcgacct tggctgcttt
     1021 gaacgacaac ggcatcaccg cggcgcaact cgtgcgcagc ccggtcgaga tttgataatg
     1081 cgttgctgac gccagatagt gggtctagat ttgcggcaga agaatccatg aagatttcag
     1141 tgtgtctcta tagtgggttt gctttggctt agttacgata caaatatgat gtagtgtatc
     1201 tgaccagaaa cacttggcat ggttcaaccg taaaggttgt cggtattgga tgatgatgaa
     1261 gctagacaag cagaccgagt tggcgtggga accccagcag cttgagccag gccaagacgg
     1321 cctgattgtg attgggcagc ttggccagtc cctcgatggt cagattgcca cggcaaccgg
     1381 ccactcgaaa tacatcaatg gccaaggggg gcttgagcac ctgcatcgcc taagagcctg
     1441 ggccgatgtg gtggtggtcg gggttggcac ggtggtggct gacgacccga aactgaccgt
     1501 gcgtctggtc aacgggcgtg atccagaccg ggttgtgatc gatccgaacg ctcgggtgcc
     1561 atttcaggca ggttgcttgc aagaggcgcc cgtgcgccga ctggtgctga cccgtgttga
     1621 tgccgagctc caggattggc cgcctggcgt agagcagatg tcgattcaga ctgagcctga
     1681 cgagcaacgg ctgccgccgc aacaggttcg agaatggttg gctaaacaag gttggcagcg
     1741 ggtgctgatc gagggtggtg cctcaacctt ggctggattt ttgtcagcag gctgcctgga
     1801 ctaccttcac cttatcacct caccggtgct gcttgggccg ggtaccgccg gcgtgcaagg
     1861 tgtgcctgtg cctgacttgt ccttggcacc ccggtttcgg gtgcaaccgt tcgccttggg
     1921 cgatgatctg cttatggtgt gcgcattcgg ttaagcgcgc gcgcaaaacg ctcccccaca
     1981 gattcccagg tcggtagcgc attggcatgc ttgagggcgg ctgcccgcat gtcagcccgc
     2041 ttttgcgggt tgttcattaa ctctctcagg gtcattgcca gcgatggggc gtcgttggct
     2101 ggtaccacgc gcgcggcagg ggtatccagc gtttgcgcag aggccccacc atcggttccg
     2161 atggtaggca gcccccaggc caacgcctcg gcataagcca tgccatagcc ttcgtagtgt
     2221 gacgccagca caaagacatc ggcttgttgg tagtggcgat tgagcgcctc gcgtggttgt
     2281 gcgccaagca gctggactcg atccgtcaat ccatattggg cgatcagcgt tttgagttgc
     2341 gcgaccgttt ctgcggcacg ttggtcgtca cccacgatgt ccaaggtcca gggcagatca
     2401 gcaagctggc tcaaggcctg aatcagcaca tcaaagccct tgcgcggcac aatggcaccg
     2461 actgacagca gtttgagagg ggtgtttgtg tcatttacac cgggtttggg tggcgatctg
     2521 tgcggtaatg cgcttggcga tactcgcggg cgatcgacgc caggttcgat gacctcgatc
     2581 tggtgcgccg ctaccccgta ttggtcaatc agcgtttggc acgtggttgg gctggtgaca
     2641 atcacaccgc ttgcagcgct taacgcaaca cgttcgctcg tgtgtagctt ttgcgcggcg
     2701 tgtgctgtca gacccgactc gagcgccagt gggtgatgca ccaatgccac aaatgcgcgc
     2761 cgcagcttga tcgcttgcgc atgctcgcca agggcgccga gcgctaagcc atcaatgacc
     2821 agatcgcgat caggcgcaac tgcggccagg cgctggaccg tcgcttgttt gacggcatcg
     2881 tccacaaatg gaaatccggc atccagactc aggatgtcaa catcccagcc ttgctcagcg
     2941 agttctttgg acacatgctt gtcgtaaagg taaccaccgg taagggtgtt gatgtcacct
     3001 ggcagtgcca gtgtcagtct gcgggccaca aacgttgctc gtaggaggcg cgtgcgacat
     3061 gagattcggc aatttcaacg cggattgagt gcagttgctt gccatcacgg ccaagttcgc
     3121 cggctctggc cgctttggcc aaaccgtcaa acaggtgctt ggtcagaaac tcggtggtgg
     3181 tgttctgtcc tttaaacgca ggctcttcgt ctaagttctt gtagtttaga ggcgccaata
     3241 acgacttcag gacctcgtgg gcgcgcgcaa tgtcgatcac gatggcattg tcatcgaggg
     3301 tttcagcgta aatcgccgca tcaatgacga atgtggcgcc atgcagtttc tgggcggggc
     3361 caaacacttc ccctttaaat gagtgggcga tcatgatgtg atcgcgaact tcgactgcaa
     3421 acatggataa ctccttatgt aaacttaacg acttggcaaa gcatcggttg tgaaccgcca
     3481 aggatgtggt gcaaatcttg cggcagttgt tca
//
LOCUS       DATBNL010000643         2853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_185826, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000643 DATBNL010000000
VERSION     DATBNL010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185826"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VIC30_10940"
     CDS             <1..370
                     /locus_tag="VIC30_10940"
                     /inference="COORDINATES: protein motif:HMM:NF017819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEY7804934.1"
                     /translation="LIMVFDQFTRHIYRDSPRAFVGDDHALRLSEQAVHAGWVANCAL
                     VSHRQFFLMPMMHSEDVEVQRASLPLFETYTDSDTLWFAKRHCEIIERFGRFPHRNTV
                     LGRVSTANEIEFLKEPGSAF"
     gene            391..846
                     /locus_tag="VIC30_10945"
     CDS             391..846
                     /locus_tag="VIC30_10945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006225945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEY7804935.1"
                     /translation="MHIWVDADACPLLIKEILYRVATRTKTPVILVANQMLRVPASPW
                     VRAQQVPAGFDVADQAIVDAAQAGDIVVTADVPLAALVVQKQAWVLDPRGDLIDHHTI
                     EARLTMRNFMEELRGSGVDTGGPKAFTPKDARAFANQLDRLLAKHGRRH"
     gene            1015..1761
                     /locus_tag="VIC30_10950"
     CDS             1015..1761
                     /locus_tag="VIC30_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006160191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7804936.1"
                     /translation="MNTVSSGSSIDSATDTDTVIDASNLSLTYQMAGQAVTVLRDASL
                     NVSAGTTVAIAGPSGSGKTSLLLLLSGLERPDAGRILIDGRDLSAMSRDELADLRRDH
                     VGIVFQSFHLLPSLTALDNVALPLQMAGVAAARQTAQDMLDRVGLGSRGHHRPGQLSG
                     GEQQRVAIARALVHRPRLLLADEPTGNLDDHTAASVRELLFGLNREFGTTLVLVTHDL
                     SFAGQCDRVLRLHDGKLNEQRQEVENVIST"
     gene            1745..>2853
                     /locus_tag="VIC30_10955"
     CDS             1745..>2853
                     /locus_tag="VIC30_10955"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY7804937.1"
                     /translation="MSFLLELAWRDLRASGRSLWIFVASLLLGVSLVAAGGGLYQQVT
                     DSLRADVRLLFGGDVEIESRDPLPQEILRWVQSRSTVSEMIDLRTMLVTDVGRSQLIE
                     LLSVDRAYPLYGDLVLDPHGDIQTVIAQQDGQWGAAIDSALASRLDLAVGDTVSVGQL
                     KLAVRAVVINQPDRNLRADWGAAPVLIAKGALEASGLLQPFSRVQYQYRVRLQGGQSS
                     DAIAFRDALLAAFPNMQAEVRSFDERSDRMTEVLQQVGSGLLLVGFSALFIGGLGVFN
                     SIKAHLDGKLASLATLRAIGLRDGRLGIFVLLQVLLLAALASTVGLVAGGIMALVGAS
                     VVADQLPTQVLLVSLWQPALVAWVFGVLTAVTFAL"
BASE COUNT          529 a          717 c          874 g          733 t
ORIGIN      
        1 gttgattatg gtgttcgatc agttcacgcg tcacatttat cgcgattcgc ctcgcgcctt
       61 tgttggggat gatcatgccc tgcgtttatc cgaacaggcc gtccatgccg gctgggtggc
      121 caattgcgcg ctggtcagcc atcgccagtt ttttttgatg ccgatgatgc atagcgagga
      181 tgttgaggtc cagcgtgcgt cgttaccgtt gtttgagact tataccgatt cagacacgtt
      241 gtggtttgct aagcgacatt gtgaaatcat tgagcggttc ggacggttcc cgcatcgcaa
      301 taccgtgctt ggtcgtgtca gtacggcaaa tgagatcgag tttttaaaag aaccggggtc
      361 tgcgttttga ggatggaaag ccagccaggc atgcacattt gggtcgatgc cgatgcttgc
      421 ccactgctta ttaaagaaat cctgtatcgc gttgccactc ggaccaagac acctgtgatt
      481 ctggtggcca atcaaatgtt acgagtgccc gcctcaccct gggtgcgcgc gcagcaagtg
      541 cccgctgggt ttgacgtggc tgatcaggca attgtcgatg cggcccaggc cggtgacatt
      601 gtggtgactg ccgatgtgcc actggcagcg cttgtggttc agaagcaagc ttgggtgctg
      661 gacccacgcg gcgacctgat tgatcaccac accatcgagg cacggttgac catgcgtaac
      721 tttatggaag aactacgcgg cagtggtgtc gatactggtg gtccgaaggc cttcaccccc
      781 aaagacgcca gggcatttgc caatcagctt gatcggttgt tggccaaaca tgggcgccgc
      841 cactagcacc gccacgagag tcaacactaa agccaccact agtgtcacca ccagcgcgcg
      901 cgtttattgc aggtgcacaa cccctgagag tgtcacggct tggtaaagac tgccaaactg
      961 gtgtgcttta cttgtgcttt gtgaccatct gatggatttc gatcacctat tgccatgaac
     1021 accgtttctt ctgggtcgag tattgatagc gctaccgaca ccgacaccgt catcgatgcc
     1081 agtaacctaa gcctgaccta tcaaatggca ggtcaagcgg tcacggtttt gcgggacgct
     1141 tcgttaaacg tttcggctgg tacgacggtg gccatcgcgg gtccgtctgg ctcgggcaaa
     1201 acctcgctgc tgctactact gtctggtctg gaaagaccgg acgcgggtcg catcctgatt
     1261 gacgggcgtg acttgtcagc gatgagtcgc gacgagttgg ccgatttacg gcgcgatcat
     1321 gttggcattg tgtttcagag ctttcacttg ctaccgagct tgactgcctt agacaacgtc
     1381 gctttgccgc ttcagatggc aggcgttgct gctgctaggc aaaccgcaca agacatgctc
     1441 gatcgcgttg ggttgggctc acgtggccat caccggcctg ggcaattgtc gggtggtgag
     1501 caacaacgtg tagccatcgc ccgcgcgttg gtgcatcgac cgcgactatt gcttgctgat
     1561 gagcccacag gcaacctcga tgatcacacg gcagcttctg ttcgagagct gctctttggt
     1621 ttgaatcgcg agttcggcac aacgctggtg ctggtgacgc acgatctttc atttgccggt
     1681 cagtgtgacc gtgtgctgcg cctgcatgat ggcaaactca atgaacagcg ccaggaagtt
     1741 gagaatgtca tttctacttg aactggcttg gcgtgaccta agggcaagtg ggcgtagcct
     1801 ctggatattt gtcgcgagtc tgctactagg cgtgtctttg gtggctgcag gtggcggtct
     1861 gtaccaacag gtcaccgatt cgttgcgtgc cgatgttcgg ttgttgtttg gtggtgatgt
     1921 cgagattgag tctcgcgacc ctttgccaca ggagattttg cgttgggtgc agtcgcgctc
     1981 aacggtctcc gagatgatcg atttacgcac gatgttggtc acagacgttg ggcgttcgca
     2041 gctaatagag ttgttaagcg tcgaccgtgc ttatcccttg tacggtgatc tcgtacttga
     2101 tccgcacggt gacatccaaa cggtcattgc gcaacaggac ggccagtggg gtgcggctat
     2161 cgatagcgcg ctcgctagcc gtctggattt ggctgttggt gacacagtgt ccgttggtca
     2221 gttgaaactt gcggtgcggg cggtggtgat taatcagccc gaccgcaatc tgcgggctga
     2281 ttggggggct gcgccggttc tgattgccaa gggtgcgctt gaagcctccg gattattaca
     2341 accctttagc cgggtgcagt accagtaccg cgtcaggctc caaggtggtc agtcatccga
     2401 tgctattgcg tttcgagacg cgttgctcgc ggcatttccg aacatgcaag ccgaggtgcg
     2461 cagctttgat gagcgcagcg accggatgac cgaggtatta cagcaagtcg gctctgggtt
     2521 gctgttggtg gggttctctg cgttgtttat tggcggccta ggtgtgttta acagtatcaa
     2581 ggcacacttg gatggcaagt tagcgagcct ggcgacgttg cgagcgatcg gtttgcgtga
     2641 tgggcgtctt ggaatattcg tgctcttgca agtgttattg ctggcggcat tggctagtac
     2701 cgttggccta gtggcaggcg gaatcatggc attggtcggc gcttctgtgg tggccgatca
     2761 gttgcctacg caagtgttgt tggtgagttt gtggcaaccg gcactcgtgg cttgggtgtt
     2821 tggggtgctt accgccgtga cctttgcgct aca
//
LOCUS       DATBNL010000644         1767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117085, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000644 DATBNL010000000
VERSION     DATBNL010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117085"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1154)
                     /locus_tag="VIC30_10960"
     CDS             complement(<1..1154)
                     /locus_tag="VIC30_10960"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY7804938.1"
                     /translation="MSNDTVNIADLTAATISEMVRSGQHPAEALASNFLAHAKPIEEK
                     LHAFAYLNDEAVLMQARILDQGRARGGELGSLAGVPIGLKDAIDTFDMPSAFGSASLA
                     GRQPRWDAKVAQLLRAQGAVIFGKTAMPAFCLGQPAQTRNPHNLEHTPGGSSSGSAAA
                     VAAGMVPVAVGTQTAGSVIRPASFCGVIGFKPTRGLISRDGLQPLCETIDQVGVFART
                     VEDAALVAQTLIAADDNDPTTKGVLPRNLVNIATSEPPFKPKFVFVKTPFWDRMDPEA
                     REAFEALSECWGEDMPTMQLPSVANQAIENLQTLMDAEFAVAMDEHMTHAGDEVDART
                     RSIVERGRQVNAFDYLKAKRAIEPVAAGFNELFDHFDAILTPASLGPAPKG"
     gene            complement(1158..>1767)
                     /locus_tag="VIC30_10965"
     CDS             complement(1158..>1767)
                     /locus_tag="VIC30_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804939.1"
                     /translation="VLSMAYRAFTWDRLRESVYLTAKTTAMVCWLFVGSWTFSSVFSY
                     LGGEGVIEHFVMSMNLSTLEFLIMAQIIIFILGWPLEWSEIIIIFVPIFLPMLAAFDV
                     DPILFGLLIAINLQTSFLTPPMAMSAYYLKGVAPPGVELWDIFKGCFPFLGMVLLTLV
                     LVYVQPKIVFYLPDLLYSNTNQADETPLEEGVIDPSFFMQTN"
BASE COUNT          437 a          480 c          499 g          351 t
ORIGIN      
        1 cccttgggag cgggccccag tgaagccggg gtgaggatgg catcgaagtg gtcaaacagt
       61 tcgttaaagc cggcggcgac cggttcaatg gcgcgtttgg ctttcaggta atcaaatgca
      121 ttgacttgac ggccgcgttc aacaatagaa cgggtacgcg catcaacctc atcgccagcg
      181 tgagtcatgt gctcgtccat ggccacggca aactcggcat ccatcagtgt ttgcaggttc
      241 tcaatggctt ggttggccac tgagggcaat tgcatcgttg gcatgtcttc gccccagcat
      301 tcagacaagg cttcaaatgc ttcgcgagcc tccggatcca tgcgatccca gaagggggtt
      361 ttaacaaaca cgaattttgg tttgaatgga ggctcagacg tcgcaatatt caccagattg
      421 cgtggcaaca cgcctttggt ggtggggtcg ttatcatcag cggcgatcaa ggtctgcgcc
      481 accagcgcgg catcttctac cgtgcgtgca aacacgccga cctggtcaat ggtttcgcaa
      541 agcggttgca agccgtcgcg cgagatcaat ccacgcgtgg gcttaaagcc aatcacccca
      601 caaaacgaag ccgggcgaat aactgagcca gccgtctgtg taccaacggc cacaggcacc
      661 ataccagcgg ccacagctgc ggcactacct gatgaggaac caccaggcgt gtgttcgagg
      721 ttgtgcggat tacgggtttg cgccggttgt cccaagcaaa aagccggcat ggcggtttta
      781 ccgaagatga ccgcgccttg ggcgcgcaaa agctgcgcca ccttggcatc ccaacgcggc
      841 tgtcgacccg caagggaagc agaaccgaag gccgatggca tgtcaaaagt atcgatggca
      901 tcttttaaac caatcggcac gccggccaat gatccgagtt cgccgcctcg cgcgcgccct
      961 tgatcgagaa tgcgtgcctg catcagcacg gcctcgtcgt tcaggtaggc gaacgcgtgt
     1021 agcttttctt caattggctt ggcgtgtgcc aagaagttgc tagccaatgc ctcggcgggg
     1081 tgctggccgc tgcgcaccat ctcactgatg gttgcggcgg tcaggtcggc gatattaaca
     1141 gtgtcgttac tcatggctta attggtctgc ataaagaatg agggatcaat gacaccttct
     1201 tcaagcggtg tctcatcggc ctgattggtg ttgctgtaaa gcaggtcagg cagatagaac
     1261 acgatcttgg gctgcacgta caccagaacg agcgtcaaca acaccatgcc gaggaacggg
     1321 aaacaaccct tgaagatatc ccacagctca acgccaggcg gcgcgactcc cttcaaataa
     1381 taggccgaca ttgccatcgg tggtgtcagg aacgaggtct gcaggttaat ggcaattagt
     1441 aagccaaaca aaatggggtc aacatcaaaa gcggccagca ttggcaagaa gatcggcacg
     1501 aagatgatga tgatctcact ccactccagc ggccagccga gaatgaagat aatgatctgc
     1561 gccatgatca gaaactcgag cgtcgacagg ttcattgaca tcacgaagtg ttcgatcaca
     1621 ccttcgccac cgaggtagga gaagaccgac gaaaatgtcc atgaaccaac aaagagccaa
     1681 cacaccatgg cagtggtttt agcggtcagg taaaccgact cacgcaggcg atcccatgtg
     1741 aaagcacggt aggccattga gagcaca
//
LOCUS       DATBNL010000645         5787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_7195, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000645 DATBNL010000000
VERSION     DATBNL010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5787
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7195"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..161)
                     /locus_tag="VIC30_10970"
     CDS             complement(<1..161)
                     /locus_tag="VIC30_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018027056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7804940.1"
                     /translation="MIEFQHVSKSYGPNAHILEDVSFQVTAGEFLFIAGPSGAGKSTL
                     LKLIAGLNK"
     gene            complement(542..892)
                     /locus_tag="VIC30_10975"
     CDS             complement(542..892)
                     /locus_tag="VIC30_10975"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF013494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEY7804941.1"
                     /translation="MSNASVVITGPALTDACQSLDPRWRVTDQTAGSSSLACSCAFRD
                     FRQAFAFMTEVALLAEKADHHPEWSNVYNKVNITLTTHDAGGITERDLALAKQIDKAL
                     THPARKAPFFRTGM"
     gene            complement(969..2276)
                     /locus_tag="VIC30_10980"
     CDS             complement(969..2276)
                     /locus_tag="VIC30_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804942.1"
                     /translation="MTAQTARTTTSAAPASQTGQASEVSQPTASTIRDWPLGVRLLLN
                     AGHAIDHMYLLIFAAAVGVIAIDFGFTRWEDLMPFGVGAFILFGLGALPAGRLGDLWG
                     RRQMMLVFFFGMAGSMLLAALSNSAWQMAAALTVMGAFASIYHPVGIPMLVQRSSTPG
                     MAIGINGLAGNLGVAVAALITGFLVKWLGWRAAFVVPSLIALGCGFLFMYLCPKEVEA
                     PAKGRIKARVQLPPKLLLRALLVLTMVAVSSNMLFNFTTNGNGQLMIERFKGIIEDPA
                     TLGMLLAAVYAIGALAQIVVGRLLDRVAIKPLFLTVVLLQIPFLLLASVSHGWVLYAA
                     LIGCMAVIFGSIPFVDVVITRYVDDRIRSRVAGFRLAVSLGISALAVWILGPFVKSSG
                     FDSLFMFMALISVCTFAVVLMLPSERSVTQPLPSSEPDTPQTS"
     gene            complement(2295..2723)
                     /locus_tag="VIC30_10985"
     CDS             complement(2295..2723)
                     /locus_tag="VIC30_10985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019702121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HEY7804943.1"
                     /translation="MLVRLLYVSRAADGQVTAELTESIMASARAYNLDNGITGVLCYG
                     GDIFMQAIEGGRQEINALYSMILRDSRHCDVVLLHYEEIHERRFGGWTMGHVNLTKLN
                     TSVVLKYSEKPKLDPYSMSGKVSMALLDELMLTASVIGRA"
     gene            complement(2729..3421)
                     /gene="folE"
                     /locus_tag="VIC30_10990"
     CDS             complement(2729..3421)
                     /gene="folE"
                     /locus_tag="VIC30_10990"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011463603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HEY7804944.1"
                     /translation="MAEQDTGTPMSMVIRQRLQQAKRRFHANDNIADYIEPGELEVLL
                     DEVAQKMKGVLDSLVIDTESDHNTNDTARRVAKMYLKEVFGGRYVPAPATTEFPNAEH
                     LNELMIVGPITVRSACSHHFCPVIGNVWIGVMPNEHTNVIGLSKYVRLAEWIMARPQI
                     QEEAVVQLADLIQDKTQPDGLAVVMSAKHYCMAWRGVRDMNSRMINSVMRGCFLKDSN
                     LRREFLSLIPKE"
     gene            complement(3547..4029)
                     /locus_tag="VIC30_10995"
     CDS             complement(3547..4029)
                     /locus_tag="VIC30_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006296231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7804945.1"
                     /translation="MFVVKPIDFAVDRERIAFIGLLDMYARDPMGGGQGLAADVESRL
                     PGDLANWPGGVHLLAWHDDEAVGLLNAFMGYSTFKAQPLLNVHDIAVLPDWRGKGVGQ
                     SLLAELQSIAVARGCCKLTLEVLSGNTRARQTYEAFGFEDYGLDPTLGAACFMQKWLR
                     "
     gene            4240..5034
                     /locus_tag="VIC30_11000"
     CDS             4240..5034
                     /locus_tag="VIC30_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013517009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7804946.1"
                     /translation="MDLKLKGKHVLITGASKGIGLACAHAFAQEGARLSLVARDLATL
                     NAAQAELNEQHADIEVAVYSANLIDDKAAQNALDKAQARFGEIDVLVNSAGAAKRTPA
                     AELTPQAWRDALDAKFFTYINMMNPVAQQMATRGQGTIVNVIGAGGKTASPIHLPGGS
                     ANAALMLATAGMAAAFGPQGVRVNAVNPGQTLTERLKEGLAAICKQDGIDMDEALKRA
                     TARVPLGRLANAEEIAQAVVFLASDQASYITGVNISMDGGAAASVV"
     gene            complement(5040..5735)
                     /locus_tag="VIC30_11005"
     CDS             complement(5040..5735)
                     /locus_tag="VIC30_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009548723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY7804947.1"
                     /translation="MSWPDLPENLMIAAEQVVQAGKSLRDRGYVHGTTGNISLRVRTD
                     QFSGYLITPTDACLGHLDANKLAAVDEQGQQHFGARASKTVALHQAIYTADPNANAVI
                     HTHSHHLVLLTLLGVWKASSILPPMTPYQVMKVGPVPLIGYAVPGHESVVHDVSQRIH
                     GMAQRGVTLRAVMCDRLGPQVWHRDLTNAMATLEELEQTARLWIDANRDVQPMARSQL
                     DALRERFGCVWAD"
BASE COUNT         1482 a         1674 c         1420 g         1211 t
ORIGIN      
        1 tatttgttta gacccgcgat cagtttgaga agtgtcgact tgccagcgcc tgagggacca
       61 gcaataaaga gaaattcgcc ggcggtgact tgaaatgaca catcttcgag gatgtgtgca
      121 ttagggccgt aggatttgga aacgtgttga aactcgatca tggtgtgact atttaacagg
      181 tgagtaagtt tgacgtcctc cccgtcctga acgacgcgga ttcctagcgg cttcatcaag
      241 ccgccaagat tgggtgtgta tcgctacttc ccaatggttc ctgcttcatc gttaaaacca
      301 ccgtttcaac tccacaggct agcacccgat gccctcgggc tacatttaaa gcgccaaccg
      361 agtcggcgtt ttccgtataa ccgcattcaa cacatttaaa tcttcactct gtggtgggat
      421 tggatctgaa ggctttgcgg ttaacttcca gattgacaat gattgtatca aagacactga
      481 ggatacgata gaccaagatg acataaaaac caaaaaactg acatacaggc tacgcccgcg
      541 cttacatccc cgtcctgaag aacggggctt tacgcgctgg atgggtaagc gccttgtcga
      601 tttgcttggc tagtgccaaa tcccgctcag tgatgccacc ggcatcgtgg gtcgtgagcg
      661 taatgttgac tttgttgtag acgttagacc attcggggtg gtggtccgct ttttctgcga
      721 gcaatgccac ttcagtcatg aaagcgaacg cttgccgaaa gtcgcgaaac gcacaactac
      781 acgccaatga cgacgaaccc gccgtttgat ctgtaacccg ccaccgcggg tctagtgatt
      841 ggcaagcatc ggttaatgcc ggtcctgtga taacgactga tgcgttcgac atctttacct
      901 cccagacttg atgaaaaacg aacgaacact gcttgtgctc gttgtccctt aatgacctgt
      961 actgagcctc aggacgtttg gggtgtgtca ggctcgcttg agggtaacgg ctgcgtgacc
     1021 gagcgctcgc ttggcagcat gagcaccacg gcaaaagtgc aaaccgaaat cagagccatg
     1081 aacataaata gcgaatcaaa acccgacgac ttcacaaacg gacccaagat ccagaccgct
     1141 aacgcactga taccgagtga caccgccaac ctaaaaccgg cgactcgtga acgaatgcgg
     1201 tcatccacat agcgcgtaat caccacatca acaaacggaa tcgacccaaa aatcaccgcc
     1261 atgcaaccaa tgagcgctgc atacagcacc cagccgtgag acaccgaggc tagcaacaaa
     1321 aaagggattt gcaacaacac caccgtcaga aacaatggct taatcgccac tcggtcaagc
     1381 aggcgtccca ccacaatttg tgccagcgca ccgatggcgt agaccgctgc caacaacata
     1441 ccaagcgtgg cgggatcttc aatgatgccc ttaaagcgct cgatcatcag ttggccattg
     1501 ccattggtgg tgaagttaaa caacatgttc gatgacacag ccaccatggt cagcaccagc
     1561 aacgcccgca gcaacagctt aggtggtaac tgcacgcgtg ccttgatgcg ccctttggca
     1621 ggtgcctcta cttctttggg gcacagatac atgaacaaaa aaccacaacc caaggcgatc
     1681 aaagagggca ccacaaaggc ggcgcgccaa cccaaccatt tcaccaaaaa ccccgtaatc
     1741 aatgcggcca ccgcaacacc cagattgcct gccaggccat tgataccaat tgccatgccc
     1801 ggtgtgcttg aacgctgcac caacatcgga atgcccacag gatgatagat cgatgcgaat
     1861 gcacccatca ctgtcaatgc tgctgccatt tgccaggcag agttggacaa agctgccagc
     1921 agcattgagc cggccatgcc aaagaaaaac accagcatca tctgccggcg accccacagg
     1981 tcacccaaac gacccgctgg caaagcaccc agaccaaaca aaataaaagc gcccacaccg
     2041 aagggcatca ggtcttccca gcgggtaaag ccaaagtcaa tagcaatcac gcctacagca
     2101 gccgcaaata tcagcaggta catgtgatcg atggcgtgac cggcattcaa taacaaccta
     2161 accccaagcg gccagtcacg gatggttgat gcagttggct ggcttacttc gcttgcttgg
     2221 cctgtctggc tcgctggggc tgctgacgtt gttgttcttg ccgtttgtgc tgtcatgact
     2281 tactagagct taaatcaagc tcgaccgatc acagaagctg tgagcatcaa ctcatcgagt
     2341 aaagccatcg atactttgcc agacatgctg taagggtcta acttgggttt ctcggaatac
     2401 ttcaggacca cagacgtgtt gagcttcgtt aaattgacat gtcccatggt ccagccacca
     2461 aagcggcgtt catgaatctc ttcataatgc agcaacacca catcacagtg acgactgtca
     2521 cgcaaaatca tgctgtaaag cgcattgatt tcctgacggc caccttcgat ggcttgcatg
     2581 aagatatctc ccccgtagca caacaccccg gtaataccgt tgtcaaggtt gtaggcacgg
     2641 gctgaggcca tgatggactc cgtcagctcc gcggttacct ggccatcggc tgctcggctg
     2701 acatataaaa ggcgtaccaa cattttcttt actccttggg aatcaaagac aggaactcac
     2761 gtcgcaggtt cgagtctttc aaaaaacatc cgcgcatgac cgaattaatc atgcgactgt
     2821 tcatatcacg cacaccacgc cacgccatgc aatagtgctt ggcgctcata accaccgcca
     2881 atccatcggg ctgcgtcttg tcctggataa gatcggccaa ttgaaccacc gcctcttcct
     2941 ggatttgagg gcgtgccatg atccactcgg ctaggcgcac atacttagac aaccctatca
     3001 cattggtatg ctcgttaggc atcacaccaa tccaaacgtt accaatgact gggcagaagt
     3061 gatggctgca cgcactgcgc accgtaatcg gtccaacaat catcaattcg ttcaggtgct
     3121 cggcgttagg gaattctgtt gtggcaggtg ccggcacata acgcccgcca aacacctctt
     3181 taaggtacat cttggctacg cgccgcgcgg tgtcgttggt gttgtggtca ctctcggtat
     3241 cgatgactag gctatcgagt acgcctttca tcttttgtgc aacctcatcg agcagcactt
     3301 cgagctcgcc aggctcgata tagtcggcaa tgttgtcatt ggcatgaaac cggcgcttgg
     3361 cctgttgcag tcgttgacgg atcaccatag acatgggagt gcctgtatct tgttcagcca
     3421 tgcgtttcac ccttttgcgc ctgtatataa actgttttta acatcagctt tcggatgtta
     3481 cacgctaggc aagcgccgaa tcggtatttt cccctgacgc cctgtgtcta tgtcagcgac
     3541 cgcagatcat cgcaaccact tttgcatgaa acatgctgcc ccaagcgtgg ggtcgagccc
     3601 gtaatcctca aacccgaagg cttcataggt ttgtcgggct cttgtgttgc ccgacaaaac
     3661 ctcaagcgtc agcttgcagc agccccgcgc cacggcgatg ctttgcaact ccgccaataa
     3721 tgactgacct acccctttgc cgcgccagtc aggtaaaacc gcaatatcgt gcacgttcag
     3781 caaaggctgc gccttaaagg tcgaatagcc cataaacgcg ttgagcaaac caaccgcctc
     3841 atcgtcatgc caggccagca ggtgcacacc accgggccaa ttcgccaaat cacctggcag
     3901 gcgagattca acgtcagcag ccaacccttg gccaccgccc atgggatcgc gcgcatacat
     3961 gtcaagcaac cctatgaacg cgatgcgctc gcgatccaca gcaaaatcaa tcggctttac
     4021 gacaaacata cgcaccccct cagaaaacat gaccaaacta gcctagctcc tggcaccatc
     4081 agtttccgat attaggctcc gacgggtcat caatcatgcc aagattacac tgaagggtat
     4141 caagcgtgtt ttaaacgcaa gaacgcggtc gcgatgtcca tacagacact actaaacaag
     4201 caccggcaaa tcacaacacc aatatcaacg gagacgcaaa tggacttaaa actcaaaggc
     4261 aaacacgtac tcatcacagg cgccagcaaa ggcattggtt tggcttgcgc gcacgcgttt
     4321 gcccaagaag gcgccagact cagtctggtg gctcgtgact tggccacgct aaacgctgcc
     4381 caagccgaac taaacgaaca gcatgccgac attgaagtcg ccgtctacag cgcaaatctg
     4441 attgatgaca aggccgcaca aaacgcgctc gacaaagcgc aagcccggtt tggtgaaatc
     4501 gacgtactgg tcaacagtgc gggcgctgcc aaacgcacgc cagcggctga actcaccccg
     4561 caagcctggc gcgacgcact agatgccaag ttctttacct acatcaacat gatgaacccg
     4621 gtggcccaac aaatggccac tcgaggccaa ggaacgatcg tcaatgttat cggtgcgggc
     4681 ggtaaaaccg cctcccccat acacttgcct ggtggcagtg ccaacgcggc attgatgttg
     4741 gccactgcag ggatggctgc cgccttcgga ccgcaaggcg tacgcgtgaa cgcggttaat
     4801 ccaggacaaa cattgaccga acgtttaaaa gaaggcttgg cagccatctg caagcaagat
     4861 ggcattgaca tggacgaagc gttaaaacgc gccaccgccc gggtgcctct gggaagactg
     4921 gccaatgccg aggaaatcgc gcaggccgtg gtgttcctgg catcagatca agccagttac
     4981 atcacgggcg tgaacatcag tatggacggc ggtgcagccg ccagcgtggt ttaaacgcgc
     5041 tagtcagccc agacgcagcc aaagcgctcg cgcaaagcat caagttggct gcgtgccata
     5101 ggttgaacgt cccggtttgc atcgatccac aaccgggccg tttgctctaa ctcttcgagc
     5161 gtggccatgg cgtttgtcag atcacggtgc cacacttgag ggccaagtcg gtcacacatg
     5221 accgcgcgta gtgtcacacc gcgctgcgcc ataccgtgaa tacgttgcga gacgtcgtgc
     5281 accactgact cgtggccagg caccgcatag ccgattaacg gcactgggcc gaccttcatc
     5341 acctgatagg gcgtcatcgg cggcaaaata ctgcttgcct tccacacgcc caatagcgtc
     5401 aacaacacga gatgatgcga atgggtgtgt atgacagcat tggcgttggg atctgcggtg
     5461 tagatcgcct gatgcaaagc cacggtcttg ctggctcgcg cgccaaagtg ttgttgcccc
     5521 tgttcatcta cagcagccaa tttgttggcg tctaaatgac caaggcaggc gtcagtcggg
     5581 gtaatcagat accctgaaaa ttggtcggtt cttacgcgca aactgatgtt gccagtggtg
     5641 ccatgtacgt aacctctgtc cctcagactc ttgccagcct gcaccacctg ctcggccgcg
     5701 atcatcaggt tttcgggcaa atctggccaa ctcatacgtc taacacctca aaggcacgtg
     5761 taaaaaattc tgtcccaccg aaattac
//
LOCUS       DATBNL010000646         2893 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87801, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000646 DATBNL010000000
VERSION     DATBNL010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87801"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /gene="moaC"
                     /locus_tag="VIC30_11010"
     CDS             <1..435
                     /gene="moaC"
                     /locus_tag="VIC30_11010"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011614574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEY7804948.1"
                     /translation="HMVDVGDKPNTKRQAVVNGSITLGSVAMQKVLDGTSKKGDVLGI
                     ARVAGIMASKKTSELIPLCHPIGLTKVSIEFETDETACRIDCTVTAETVGQTGVEMEA
                     LTAASVALLTIYDMLKAVDRGMVIGPIALQEKLGGKSGHWQR"
     gene            complement(487..1158)
                     /locus_tag="VIC30_11015"
     CDS             complement(487..1158)
                     /locus_tag="VIC30_11015"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY7804949.1"
                     /translation="MNMPKDVQQTMATHPLFEGMGRSQQNWLFTVGKSIALSKHDYLF
                     RRGEKSGLLYILLSGHIKLSIPAERGQEKVLEFLSPGDVFGESALLNDHVAITDAQAL
                     GTCDLLAFEGKDVMVAVTRVPSFAQQLLTNLSQRVETLFRDMESVSLLSAAQRVAEYL
                     LRQPRVGNQAKLPFHKRAIASKLGLQPETFSRSLQQLAADGLISVRGARVVIHDADKL
                     QALLV"
     gene            complement(1160..2557)
                     /gene="hemN"
                     /locus_tag="VIC30_11020"
     CDS             complement(1160..2557)
                     /gene="hemN"
                     /locus_tag="VIC30_11020"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010460668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEY7804950.1"
                     /translation="MELAHLTTLDFDAAMIARHDGSGPRYTSYPTADRFQSGSVSFDY
                     IAALKARDAGHTDAPLSLYVHIPFCDTVCYYCACNKIVTKHKFKADPYLDDLEKEIGL
                     IRALFHEAPVVSQLHFGGGTPTFLTNEQMERLLKMLHANFRFAADAECSVEIDPRAIA
                     PGALKLMADYGFNRMSLGVQDVDEAVQKAINRVQPVEVTGQVLEEARSLGYKSINMDL
                     IYGLPLQSVNTMYRTLKTVLDWRPDRIALYSYAHLPDRFKPQRRIDTDAIPSPQEKLA
                     MLKLAVTTLLDAGYVYIGMDHFALPEDELAESLDEGSLQRNFQGYSTRADCDLIALGV
                     SAISRIGHVYAQNARTLDEYHEMLEQGELPLIRGLVISRDDEIRRDAIHSLLCQSKLS
                     FSDMAQRWGIDARQYFEQDLEGLTGLQADGLVEVDEENVMITPKGRFLSRVVAMRFDK
                     YLRMGQTMARYSKVI"
     gene            2702..2790
                     /locus_tag="VIC30_11025"
     tRNA            2702..2790
                     /locus_tag="VIC30_11025"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2736..2738,aa:Leu,seq:taa)
BASE COUNT          711 a          799 c          746 g          637 t
ORIGIN      
        1 cacatggtcg atgttggtga caagcccaac accaagcggc aggcggtcgt caacggctcc
       61 attacgcttg ggtctgtggc catgcaaaaa gtacttgatg gcaccagtaa aaaaggcgat
      121 gtgcttggaa ttgcccgagt ggcaggcatc atggccagta aaaaaaccag tgaactaata
      181 ccgctgtgtc accccatcgg tctgaccaaa gtcagcatcg agtttgagac cgatgagacg
      241 gcttgtcgca tcgactgcac cgtcaccgcc gagactgtcg gccaaaccgg cgtggaaatg
      301 gaggcgctga ccgcggcatc ggtggctcta ctgaccattt acgacatgct caaagccgta
      361 gaccgtggca tggtgattgg tccaattgca ctgcaagaaa agctcggcgg caaatcaggt
      421 cactggcagc gctgattggt gcaatagcac tcgataccag cacaagaaca gtacaccaca
      481 ccaccactac accagcaaag cctggagctt gtctgcatcg tgaatcacca cgcgcgcgcc
      541 acgcaccgaa atcaacccgt cagctgcaag ttgctgcagc gagcgcgaga acgtctcggg
      601 ttgcaaaccg agcttagacg caatggcgcg cttgtgaaac ggcagtttgg cctggtttcc
      661 cacccgcggc tggcgcagta ggtattcagc cacgcgttgt gcggccgaga gcaaactcac
      721 ggactccatg tcacgaaaca aggtttcgac gcgttggctt aggttggtaa gtaactgctg
      781 cgcaaacgac ggcacgcggg tcacagccac catcacatcc ttaccctcaa atgccagcaa
      841 gtcacatgtg ccaagcgctt gtgcatcggt aatggccacg tggtcgttga gcaatgccga
      901 ctcaccgaag acatcacctg gggatagaaa ctcaagcact ttctcttgac cgcgctcagc
      961 cggaatcgac aacttgatat gacccgaaag caaaatgtag agcaaaccgc tcttctcgcc
     1021 ccgccgaaac aggtagtcgt gcttggacag cgctatcgac ttaccgacgg tgaacaacca
     1081 gttttgttgg ctgcgtccca tgccctcaaa cagtggatgg gtcgccatgg tttgctgcac
     1141 atccttgggc atgttcatat caaatcacct tcgaatatcg agccatggtt tgacccatgc
     1201 gtaaatattt gtcaaaccgc atggccacca ccctcgacaa aaaccggccc ttgggggtaa
     1261 tcatgacgtt ttcttcatcc acttcgacca aaccgtcggc ctgcaaaccg gtcaagcctt
     1321 caaggtcttg ctcaaagtat tgccgagcat cgatgcccca gcgttgagcc atgtcagaaa
     1381 atgacaactt ggactgacac agcagcgaat gaatggcatc gcgccggatc tcatcgtcgc
     1441 gtgaaatcac caacccacgg atcagcggca gctcgccttg ctcgagcatc tcgtgatact
     1501 cgtctagcgt gcgggcgttt tgtgcgtaga catgcccaat gcgactgatg gccgagacgc
     1561 ctaatgcaat taagtcgcag tcggcgcgtg tggagtagcc ttgaaagtta cgctgcaaag
     1621 agccctcatc tagcgactca gccaactcat cttctggtag tgcaaagtgg tccatgccaa
     1681 tgtagacata acctgcatct agcaaggtcg ttacagcaag ctttagcatg gcaagttttt
     1741 cttgtggcga gggaattgcg tcggtatcaa tacgccgctg tggcttaaaa cgatctggta
     1801 ggtgcgcgta actgtaaaga gcaatacgat caggtcgcca atccagaacc gtctttaagg
     1861 tgcgatacat ggtgttgacc gactgcaacg gcaagccgta gatcaaatcc atgttgatgg
     1921 acttgtaacc caacgatctg gcctcttcta acacttgccc tgtgacttcg actggctgga
     1981 ctcggttgat cgctttctgt acggcttcgt cgacgtcttg cacacccaag ctcatgcggt
     2041 taaagccgta atcggccatg agctttaacg cacccggcgc aatcgcacgc gggtcaatct
     2101 ccactgagca ctcggcatcg gctgcaaaac gaaagttcgc atgcagcatc tttaacagac
     2161 gctccatctg ctcgtttgtt aggaacgttg gcgtgccacc accgaaatgc agttggctca
     2221 ccactggcgc ttcgtgaaac aaggcgcgga ttagcccgat ttccttttcc agatcatcaa
     2281 gatagggatc ggctttgaat ttgtgtttgg tgacgatctt gttgcaagca cagtagtagc
     2341 aaaccgtgtc acaaaatggg atgtgcacat ataacgacag cggcgcatcc gtgtgcccgg
     2401 catctcttgc tttgagcgcg gcaatatagt caaaactgac cgaaccggac tgaaaccggt
     2461 ctgcagtcgg atacgaggtg tagcgcggac cgctgccgtc atggcgagca atcatcgctg
     2521 catcgaaatc aagggttgtt aagtgtgcaa gttccatgcc tctaagttaa tgtcactagc
     2581 gcacccggca tagggggcta taccccgcaa atttgatcca gaacaagttt ttaagtgttc
     2641 gccgcgcact ttgaccgtcc taaaaacaga atcgctcaga tggcgtagaa tgacggtcgg
     2701 cgcccgggtg gtgaaattgg tagacacagc agacttaaaa tctgccgacc cgaaacggtc
     2761 gtaccggttc gattccggtt ccgggcacca cgtttaaatc ggtcaagaat tgctgggaac
     2821 gttttttctc gtctagtcta attacggctc gtatagcctc cgcttcacga gccaactcag
     2881 atctcaattc ctc
//
LOCUS       DATBNL010000647         2167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_127328, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000647 DATBNL010000000
VERSION     DATBNL010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127328"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VIC30_11030"
     CDS             complement(<1..359)
                     /locus_tag="VIC30_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase family
                     protein"
                     /protein_id="HEY7804951.1"
                     /translation="MLRVLVIRNDKIGDFMLAWPALALLKRAGCHVTVLVPSYTAPLA
                     RLSPSVDDVLIDPGLDADGPAQEQLQQAVSQGEFDAALTLFSTWRTGQLLRRAAIAYR
                     LAPATKVAQFLYNHRLP"
     gene            complement(399..1580)
                     /locus_tag="VIC30_11035"
                     /pseudo
     CDS             complement(399..1580)
                     /locus_tag="VIC30_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012365925.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
     gene            1736..>2167
                     /locus_tag="VIC30_11040"
     CDS             1736..>2167
                     /locus_tag="VIC30_11040"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7804952.1"
                     /translation="MSSSDPATDARSIQSYIDETPFWKDGTETTTVPLTGMQWRIWLL
                     ATAGKFFEGMVVFMTGVALPLIVAEFNIGATEKGVISASVLAGILVGASALGGMADTY
                     GRKAMFIIELVLFCAFLVALTFSGSWLWIAIFLFGMGAALGC"
BASE COUNT          598 a          634 c          521 g          414 t
ORIGIN      
        1 tgtggcaggc ggtggttata taggaactgg gccactttgg tggctggcgc caaacgatac
       61 gcaatcgctg cacggcgtaa cagctgtcct gttcgccatg tagaaaacaa tgtcaacgcg
      121 gcatcaaact caccctggct aaccgcctgc tgcaactgtt cttgggcggg cccatcggcg
      181 tcaagacccg ggtcaatgag cacgtcatca acagatgggc taagccgggc caaaggcgct
      241 gtgtaagacg gcacgagcac cgtgacatga caccctgctc tctttaaaag cgccaaagct
      301 ggccatgcca gcatgaagtc accaatcttg tcgttacgga taaccagaac tcgcaacatc
      361 ttccttacta cctaagcatc aactctatcg gctattttga gggcggcatt catgacggcg
      421 acgttaaccg caatcgagac aaatgccgca gccagaatga cgctgtagac ttcttgtccg
      481 atgagcttca tcgccagccc catgcccgcc agaataaagg aaaactcacc aatctgtgcc
      541 agactcgctg acaccagcag cgcggtccgc gctgaataac cgcttagcag cacaaacccc
      601 gcggcaatgg cggttttagc agcaatcacg agcaaaaccg tcaatgccag caaaagtggc
      661 tcacgcagca caatgctggg gtcaaacaac attccgaccg acacaaaaaa cagcaccgca
      721 aaggcatcac gaagcggcaa ggactcttcc gccgcacggt ggcttagatc cgactcacgc
      781 aacatcatgc cggcaaaaaa agcgcccagg gcgaacgaca catcaaacac ggctgccgca
      841 aaaaaagccg taccgagtgc cgtggcaatc acgcacagcg taaacaactc tcgcgaaccc
      901 gtgtcagcca cccgcgccaa catccatggc aagacccgtt tacccactac aagcatcaag
      961 gccacaaagc cgactaactt caaaaaagta atagaaagtg acaaccacac gtcagacgaa
     1021 atcgacatgg cagcatcgac tgactccgcc tcagccatga gactagctgc cacgggcaag
     1081 aggactagca tcaacaccat caccagatct tcaacgacca gccaaccaac tgcaatcttg
     1141 ccatcgttcg tatacagcaa ctcgcgcgac tccagcgagc gcaacaacac gacggtactt
     1201 gcgacagaca gcgacagccc aaacaccaca ctgccaatca ggctcatgtc ccataaccaa
     1261 ccaagaccca tgccaagcag cgatgacgca acgatctgaa gaattgcgcc cggaatcgcc
     1321 aggcgcttaa ccgccatcaa atcgctaatg gagaaatgca ggccaacacc aaacatgagc
     1381 aacatcacac cgatttctga cagctgatgc gccaagccca tgtcacccac aaaccctggc
     1441 gtggttggcc caatcagaat gccggttaac aagtaaccca ccaagggtgg gatccgcagg
     1501 cggctagcga tatagcccaa gatgagcgct aacccaaacg cagcgaccaa gatagcaatt
     1561 agattgatgt cgtgtggcat gaccaattca ctttgttgac gcgtattcaa gagtctatcg
     1621 cgacctgcgc gcctgtatgg tctggagagt cacaaaaact cctctcactt gtcacacaca
     1681 agtaactctt aatcactacc atcattatcc gaacagattt gatcgagagg aacccatgtc
     1741 atcttcagac ccagccaccg atgcgcgctc gatacagagc tatatcgatg aaaccccatt
     1801 ctggaaagat ggtaccgaga ccacaacggt gcccctgaca ggcatgcagt ggcgtatttg
     1861 gttgcttgca acagccggta agttttttga agggatggtg gtctttatga ccggcgtcgc
     1921 actgccacta atcgtggcgg aattcaatat tggtgccaca gaaaaagggg ttatcagtgc
     1981 ttcggtgcta gccggtattc ttgtcggtgc ttcggctttg ggtgggatgg ccgataccta
     2041 cggccgcaaa gccatgttca tcatcgaatt ggtgctgttt tgcgctttct tagtagcgct
     2101 aacgtttagt ggtagttggc tgtggattgc gatttttctc tttggcatgg gcgcagcact
     2161 cgggtgt
//
LOCUS       DATBNL010000648         1985 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_97357, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000648 DATBNL010000000
VERSION     DATBNL010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97357"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..1985
                     /gene="glyS"
                     /locus_tag="VIC30_11045"
                     /pseudo
     CDS             33..1985
                     /gene="glyS"
                     /locus_tag="VIC30_11045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064983.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
BASE COUNT          452 a          603 c          519 g          411 t
ORIGIN      
        1 cccatgttga acacccgcga ggccaaagcc gcatgagtca cgctccctcc actgatcaag
       61 ccgcacttct agttgaactc tttaccgaag aactgccacc caaagccttg caacgcctcg
      121 gtgaaagctt tgctcaaggc atcacggacg gcttaactga caaagcgctg ctcactggtg
      181 acagcgtgac caccgcatat gccacgccta gacgcctggc tgttcacatc acggccgtca
      241 aagccactgc acccgagcag tagttttctg agaagctcat gcccgcaaaa atcggacttg
      301 atgaaaacgg ccaagccacc cctgccctgc aaaagaaact cgctgccaaa gggctatcac
      361 atctgcaacc gggtgacctc acgcaaatcg acgacggcaa acaagcctac cttgttgccc
      421 aaggcactgc gccaggcgcg cagctcgcag gtgtcatcga gtctgtgatt gaaacggcca
      481 taggcaagct gccgatcccc aaagtgatgc gctatcaact ggcagacggt cataccagtg
      541 tgcagtttgt cagacctgct catgggcttg tgatcttgca cggtgaccat gtgctaccag
      601 cccacatttt ggggctagat gccggtcgtc gcacttgggg ccaccggttc ttaagtcaca
      661 cgcccatcga catcacgtcg gccgaccaat acgagagcca actgaccaaa gagggtctgg
      721 tgaccgccag tttcgaagcg cgtcgtgagt tcattcgcga ccaacttttg acgcatgcca
      781 acgccctaga tgctgtcctt ggtgatgacc cagccgttga cgcgcttttg gatgaggtca
      841 ctgcattggt ggaagcaccc gcaatctaca ccggtcagtt cgaagagcgg tacctagatg
      901 tacccgccga atgcctgatt ctgaccatgc gcctaaacca gaagtacttt ccacttttta
      961 acgcaagcaa aggcgagctg atcaaccaat tcctcatcgt tagcaacatg ccgattgctg
     1021 acccaagcgc catcatcggc ggtaacgagc gcgtggtacg tccacgcttg gcagatgcgg
     1081 agttcttttt tctgaccgac aaaaaagaaa aactggccga tcgcctaccc gcattagaaa
     1141 acatcgttta tcacaacaaa cttggcacgc aacgcgttcg tgtcgaacgg gtgcggcaaa
     1201 tagccgactg gctggcacgg gcattgggcg ccgatgccca cttggccgac cgtgcggcac
     1261 tgcttgccaa agccgacctc accacgttga tggttggcga gtttcctgaa ctgcaaggcg
     1321 tgatgggtgg ctattacgcc cgagccgatg gcgagcccga accggtggtc aatgccattg
     1381 ccgcgcaata ccggattcgc tggcccgcgc ctgtcagtgc gatggacttg cctggtgtgg
     1441 tgctgttcat ggccgaacgc gccgagacgc tcattggcat ttggggcatt ggcctagcac
     1501 ccaccggcga acgcgacccc ttcggtttaa gacgtgccgc gctcggtttg atcagcgcat
     1561 tcgaacaatt acgcgacggt ggttacttgg ccctgcaggg acagcacgaa ttaacgcttg
     1621 aatcgctctt gcaacaggct tatggcacct ttgaccaaag cctcgatcta gccgccgaca
     1681 ctgtcactgc cgttggcgca tttgtgcgcg agcgctatcg caaccaattg ctcaccacgc
     1741 tggatcgcga cgccgttgag tccgttctgg ccctaggttc cccattacat gaaatcaccg
     1801 cccgggtggc ggctgcccat gcattcaagt cttctgatgc cgcaccaagc ttggctggtg
     1861 ccaacaaacg cattggcaac ctgttaaaga aagtcgatga tctgtccgtg tcatttaatg
     1921 ctgacacgct atcagagcct gctgagattg aactggccaa acagctgcaa gaggtcacgc
     1981 cacac
//
LOCUS       DATBNL010000649         1534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_127365, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000649 DATBNL010000000
VERSION     DATBNL010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127365"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VIC30_11050"
     CDS             complement(<1..280)
                     /locus_tag="VIC30_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804953.1"
                     /translation="MSATTSAPASANSTALKGDTACATAAETNSAPDIWMIGDIQGCV
                     APLLSLLSHPDIASNPNARFWFAGDLVNRGPSSLQTLRHLMSIEDRGVF"
     gene            complement(277..1461)
                     /gene="lptG"
                     /locus_tag="VIC30_11055"
     CDS             complement(277..1461)
                     /gene="lptG"
                     /locus_tag="VIC30_11055"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEY7804954.1"
                     /translation="MSTARNYIARELYRSTLVVMLALIGLFSFFTLVDQLDAVSDRLP
                     LTALLYIELLALPTRTYELLPIGVLIGAVLALAGLAHRNELVILRVSGVSALRLLGML
                     WTACIPIIVIAVVLSEYITPAAEIRYSEANLTLRGKVEGGRLASGYWFREPTDQGGSR
                     VLNIGELLSSGEVANLTIYDIGPDNRLKQLTQADRGVFEGDLLRLFNVRDNQIPPDAL
                     GALADGLPADEPMMVVKQQDTRILDTTLTPGRVVARIATPEKMSLATLWDYIQYLQSN
                     DLDDTRQVVAVWRKLAYPFTLLVMLTIAAPIAFMQTRRGGMGAKVFAGILTGTVFFMV
                     GQLTLNMGLLYKWQPVVTALLPNVLAFMLALGTLLAMERRFKWGRATKLPSPPLKQGT
                     NP"
BASE COUNT          365 a          408 c          425 g          336 t
ORIGIN      
        1 taaaaacacc acggtcttcg atggacatga gatgtcgcaa ggtctgcaag gaactcggtc
       61 cacgattgac caagtctccg gcaaaccaga atctggcatt tgggttactc gcgatatccg
      121 gatgtgacaa caagctaagt aacggcgcaa cacatccctg aatgtcacca atcatccaga
      181 tatcgggcgc gctgttggtc tctgctgctg ttgcacaggc ggtgtcgccc ttgagggcgg
      241 ttgagttagc actcgcggga gcgctggtag tggcgctcat gggtttgttc cttgtttcag
      301 tggcggggat ggcagtttag tggcacgtcc ccatttaaag cgtcgttcca tggcgagcaa
      361 cgtgccaagt gccagcataa aggccagcac gttgggcagc aacgctgtca caacaggttg
      421 ccacttatat aacagaccca tgtttaaggt gagttgcccg accataaaaa agacggtgcc
      481 cgtcaaaatc cccgcaaata ccttggcgcc catgccgccg cgtcgtgttt gcataaaggc
      541 aatcggcgca gcaatggtta gcatcactaa aagcgtaaaa ggataagcca gtttgcgcca
      601 gaccgccacg acttgtcggg tgtcatcaag gtcattgctt tgcaagtatt ggatatagtc
      661 ccacagcgtg gccagcgaca ttttttctgg ggtagcaatc cgggctacca cccggccagg
      721 tgtgagcgtg gtgtcgagta tgcgcgtgtc ttgttgcttg acgaccatca tcggttcatc
      781 agcaggtagc ccatcagcca gcgcaccaag tgcatcgggc ggaatttggt tgtcgcgaac
      841 attgaatagt cgcagcaaat ccccttcaaa tacgcctctg tctgcctgcg tcagttgttt
      901 taggcggttg tcggggccga tgtcatagat cgtcaggttg gcaacttcac cggagcttag
      961 cagttcaccg atattcagga cacgcgagcc gccctggtct gttggctcgc gaaaccagta
     1021 gccgcttgct agtctgccgc cctcgacctt gccgcgtaac gtgaggttgg cttcgctgta
     1081 gcggatttca gccgccgggg tgatgtattc cgacaacacc acggcaatga cgatgatagg
     1141 aatacaggct gtccagagca tgccaagtag cctcaaggca cttaccccgg atacgcgcag
     1201 aatcacgagt tcattgcgat gcgccaagcc tgctaatgcc agcactgcac caatcaacac
     1261 accaatcggt agcagctcgt aggtacgcgt tggtaaggct agaagctcga tgtagagcaa
     1321 tgccgttaat ggcaatcgat cactgacggc atcgagttgg tcaacgagtg taaaaaatga
     1381 aaacaacccg ataagcgcca acatcaccac caaagtggaa cgatagagct ctcgggcgat
     1441 gtagttgcgc gcagtggaca tcgttgcagt ttaacggacg cacgcgcgaa gctggactcg
     1501 aatctgtgac accaccggtt caacatcggg tgtc
//
LOCUS       DATBNL010000650         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_127366, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000650 DATBNL010000000
VERSION     DATBNL010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127366"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VIC30_11060"
     CDS             complement(<1..605)
                     /locus_tag="VIC30_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008168079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEY7804955.1"
                     /translation="MSLLFTPITLGQTELSNRVVVAPMCQYSAINGSATDWHIMHLGN
                     LAMSGAGLVILEATAVTPEGRITPGCLGLYSDDNEAALARVLPMIRAVSNTKLFIQLG
                     HAGRKAASARPWEGGQQLPEAATTWHTIAPSALAHNEHEVPPTALDETGLARIKQAFV
                     DSAKRAQRLGLDGIELHAAHGYLLHQFLSPVANQRTDQYGGS"
     gene            836..1282
                     /locus_tag="VIC30_11065"
     CDS             836..1282
                     /locus_tag="VIC30_11065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011903882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1134 domain-containing protein"
                     /protein_id="HEY7804956.1"
                     /translation="MKAKTWLASACIGASVMLGGLAHAEAPLEPSGIVTIDQTQFGFI
                     IGGSVGGGVLTIDGVAHDFKIGGISLGANFGASELAASGEVYNLKKLEDFPGNYVTTG
                     GQVALGGGQGGMQLQNSKGVIMRLQATAKGLQFNVGAGGVNVYFDK"
     gene            1396..>1710
                     /locus_tag="VIC30_11070"
     CDS             1396..>1710
                     /locus_tag="VIC30_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011903882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804957.1"
                     /translation="MNALSMKRLAGSLAAMGVLTLAGGAVLAESPKKPVAQVSIDETQ
                     FGFILGGSTGGGVLTYEGEKHTFKMGGVSLGANIGVSKFSATGQVYDMTDLSQFEGTY
                     VRL"
BASE COUNT          372 a          393 c          514 g          431 t
ORIGIN      
        1 gaaccgccgt attggtcggt gcgttggttg gcaactggag agaggaactg gtgcaacagg
       61 tagccatgtg cggcatgtag ttcgatgccg tcaagaccga gtcgttgtgc gcgtttggcg
      121 ctatcgacaa aggcttgctt gatacgcgcc aagcccgtct catcgagtgc cgtgggcggc
      181 acttcgtgtt cattatgtgc cagtgcgcta ggcgcgattg tatgccatgt ggttgcagct
      241 tctggcaatt gctgcccgcc ttcccagggg cgtgcgcttg cggctttgcg tccggcatga
      301 ccaagctgaa taaaaagttt ggtgttcgag acggcgcgga tcatgggtaa tacgcgtgcc
      361 agtgcggctt cattgtcgtc gctatacaga cctaggcaac cgggtgtgat gcggccttcg
      421 ggcgtcacag ccgttgcctc aaggatgacg agtcccgcgc cagacatggc taggttgccc
      481 aagtgcatga tgtgccagtc ggtggcgctg ccattaatgg ctgagtactg gcacatgggt
      541 gccaccacaa cgcggtttga tagttcggtc tgtccaagtg tgattggtgt aaataaaagg
      601 ctcataaagt gctctcgact aaagtttggt gagtttgtgg cagttggcta acgttttaac
      661 agatggcggc gtgaatgccg actagatgaa agatctatga cgttttggtg actacttagg
      721 tagctgaagg tttttgaagg catttagtgg gtggaaatgg ccgtaactgc attgacttgg
      781 tcgccggtta ctgtgatagt gcgttgacct tccaccgttc attaaaggaa aaatcatgaa
      841 agcaaaaact tggctggctt cagcttgcat tggcgcgagc gttatgctcg gtggtttggc
      901 tcacgcagag gcaccacttg agcctagcgg catcgtcacc atcgaccaga cacaatttgg
      961 tttcatcatt ggtggcagcg tcggtggcgg tgtattgacc attgacggcg tggcgcacga
     1021 ctttaagatc ggtggcatta gtctaggcgc caatttcggt gcctctgagc ttgcagccag
     1081 cggcgaagtc tacaacctta agaagcttga agacttccca ggcaattatg tcaccacggg
     1141 tggccaggtg gcgcttggtg gtggtcaagg tggcatgcag ctgcaaaaca gcaaaggcgt
     1201 gatcatgcga ttgcaggcta cagccaaagg gcttcagttc aacgtaggcg ccggtggtgt
     1261 taacgtatac ttcgacaagt agtaactaac accgacgacc tatctctgtg acgctacgac
     1321 gctagccgta cgtcagtttg gctaatgttg ttttaatcgc agaccttttt taagcacaac
     1381 acaaggaaac actagatgaa tgctctttcg atgaaacgct tggcaggttc actggcagcc
     1441 atgggtgtac tgacgctagc cggcggggcc gtgttagctg aatcccctaa aaagccagtt
     1501 gcccaagtca gcattgacga aactcagttt ggcttcatct tgggtggcag cactggcggc
     1561 ggtgtgctga cttatgaggg cgagaagcac acgtttaaga tgggtggtgt tagtttaggt
     1621 gccaacattg gcgtctctaa attctcagcg acgggccaag tctacgatat gactgatttg
     1681 tcacagtttg agggtaccta tgtgcgcctg
//
LOCUS       DATBNL010000651         1543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57547, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000651 DATBNL010000000
VERSION     DATBNL010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57547"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VIC30_11075"
     CDS             <1..401
                     /locus_tag="VIC30_11075"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010089975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY7804958.1"
                     /translation="VGLMPQHVNTMGGYKAQGMDDAAAERVRKDALAVEQAGAFAVVL
                     EGVKHSVATDITGDLAIPTIGIGASPHCDGQILVTEDMLGLNGEKVPKFVKRYADMGS
                     DVRQAVQRYADEVRAGKFPETQHCFGVKKP"
     gene            429..947
                     /locus_tag="VIC30_11080"
     CDS             429..947
                     /locus_tag="VIC30_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HEY7804959.1"
                     /translation="MSKAVKPDPDTIVWHIVKQSPIHGRGVFARRNIPAGTRIIEYVG
                     EKISGEEADRRHPTNPDDPFHTFFFMLSNGKVIDGNVNGNDARWINHACDPNCESEEG
                     RAGKRVYVTAKRDIKRGEELNYDYGLVMDGKITKQNRLEYACRCGSTNCRGTMLALPK
                     KKKRKTKKQDSV"
     gene            complement(998..1477)
                     /locus_tag="VIC30_11085"
     CDS             complement(998..1477)
                     /locus_tag="VIC30_11085"
                     /inference="COORDINATES: protein motif:HMM:NF023338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3429 domain-containing protein"
                     /protein_id="HEY7804960.1"
                     /translation="MNVDPLSNEKLNSTKIPLSVLLPGLAGLIPFVVLSLSEVMSLGL
                     PPIISLIAFNTYGAVILSFVGAIWWGLAAGSTQSVPRQVMFSWSVVPALIGWFATLVA
                     PDVGVLMLSVGFALQWLGDAWLVRRYRDVAPAWLFPLRTILTGGVLASMAIAWWFLV"
BASE COUNT          424 a          422 c          380 g          317 t
ORIGIN      
        1 tcgttggcct gatgccgcaa cacgtcaaca ccatgggtgg ctacaaagcg cagggcatgg
       61 atgatgcagc cgccgaacgt gtacgtaaag acgcactcgc cgttgaacaa gccggtgctt
      121 ttgctgtggt acttgagggt gttaaacaca gtgttgccac tgacatcacc ggtgacttgg
      181 cgataccgac catcggcatt ggcgcctcac cccattgtga cgggcagatc ctcgtgaccg
      241 aagacatgct cggcttaaac ggcgagaagg tgcctaagtt cgtcaagcgc tacgccgaca
      301 tgggctctga tgtcagacag gctgtacaac gctatgccga tgaggtccgt gcgggtaagt
      361 ttccagagac gcagcactgt ttcggtgtta aaaagccgta gccaaacgca ttcgaaacgg
      421 agctgttgtt gagcaaagct gtcaaacctg acccggacac cattgtctgg catattgtta
      481 agcaatcacc cattcatgga cgtggtgtat ttgctcgccg caacatccct gctggcacac
      541 gcatcattga atatgttggc gagaagatta gtggcgagga ggcggatcga cgccatccca
      601 ctaaccccga tgatccgttt cacacttttt ttttcatgct cagtaacggt aaggtaattg
      661 atggcaatgt caacggcaac gatgcccgct ggatcaacca tgcatgcgat cctaactgcg
      721 aaagcgaaga ggggcgtgct ggcaagcgtg tttatgtaac tgcaaagcga gacatcaagc
      781 gtggcgaaga gctcaactat gattatggac tggtcatgga tggaaaaatc accaaacaaa
      841 acaggcttga atatgcttgc cgttgtggca gtaccaactg tcgcggcacg atgctcgctt
      901 tacccaaaaa gaaaaagcgc aagaccaaaa aacaagattc agtctagcgc accttgttcg
      961 cttctggccc ggctagaaaa gcgcgttttg ttgagcctta tacaagaaac caccaagcaa
     1021 tggccatgct cgctagcaca ccgccggtca gaatcgttcg aagcggaaac aaccaggctg
     1081 gcgctacatc ccgatagcgt ctaaccagcc aggcatcacc caaccactgc aatgcgaacc
     1141 ccactgacag cattaaaacg ccaacgtctg gcgcaaccag cgtcgcaaac caaccaatca
     1201 aggcaggcac cacgctccaa ctaaacatca cctgccttgg tacgctttgc gtactacccg
     1261 cggcaagccc ccaccaaatc gcccccacaa aactcagtat caccgcacca taggtgttaa
     1321 atgcgatcag gctaatgatc ggtggcaaac caagcgacat cacctctgac aatgacagca
     1381 ccacaaaagg gatcaaccca gcaagcccgg gtaacaatac cgacaacggt attttggtgc
     1441 tattgagttt ctcgtttgac agcgggtcga cattcataga tcaagtctca caacgttttg
     1501 agtgtgcgta taacagtcaa agtgtagtcg ctgttcaaac aca
//
LOCUS       DATBNL010000652         1585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147557, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000652 DATBNL010000000
VERSION     DATBNL010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147557"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /gene="earP"
                     /locus_tag="VIC30_11090"
     CDS             <1..577
                     /gene="earP"
                     /locus_tag="VIC30_11090"
                     /inference="COORDINATES: protein motif:HMM:NF021598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEY7804961.1"
                     /translation="NTIGVAPQDNPTLVSVFTYPHAPIHSFIEQLQQTGKRYHLLIPS
                     TKPLPADRLPKQSKDALVTWQTIQFLSQNDYDRLLWSCELNLVRGEDSFMRAIWAGKP
                     LLWQIYPQADGVHHDKLKAWLALANPPATAALAMHEWADGQLHTDLSSALAGDGWQQW
                     RQSSRDLCDRLAEQSELATRLDTLARHQLNS"
     gene            657..1217
                     /gene="efp"
                     /locus_tag="VIC30_11095"
     CDS             657..1217
                     /gene="efp"
                     /locus_tag="VIC30_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEY7804962.1"
                     /translation="MKTAQELRVGNVIIIDGQAQVVQRTEYNKSGRNAAVVKLKLKNL
                     LTASGTESVFKADEKFDVVVLDRKECTYSYFADPMYVFMDEEYNQYEVEADSMGDALN
                     YLEESMSVEVVFYEDRAISVEMPNVVVREIIYTEPAVRGDTSGKVMKPAKINTGFELP
                     VPLFCDIGDKFEIDTRTGEYRSRSAS"
     gene            complement(1329..>1585)
                     /locus_tag="VIC30_11100"
     CDS             complement(1329..>1585)
                     /locus_tag="VIC30_11100"
                     /inference="COORDINATES: protein motif:HMM:NF018391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEY7804963.1"
                     /translation="NTHTPIPAELQKIQAELLSYLRQAVRSAEDVGSDFVTEARAMHE
                     GEAPARSIRGIASAQDREELAEDGIAVMPVPDFLSDDRLQ"
BASE COUNT          382 a          439 c          415 g          349 t
ORIGIN      
        1 gaacacgatt ggggtagcac cccaagataa tcccacgctg gtatctgtct tcacttatcc
       61 gcacgcaccg atacattcat tcattgaaca actacaacaa accggcaagc gctatcacct
      121 gctgatccct tcgacaaagc ccctgccagc cgatcgccta ccgaagcaat cgaaagatgc
      181 gctagtgaca tggcagacga tccagtttct cagtcagaac gactacgaca ggctgttgtg
      241 gtcttgcgag ctcaacctcg tgaggggcga agactcgttc atgcgcgcca tttgggcagg
      301 caagcccttg ctgtggcaga tttacccaca agccgacggc gtccatcacg acaagctcaa
      361 agcttggctt gcactggcca atcccccagc aacagccgca cttgccatgc atgaatgggc
      421 tgacggccag ttacacaccg acctgagctc agcgctcgcg ggcgacggtt ggcaacaatg
      481 gcgtcaaagc agccgggatc tctgtgaccg acttgccgag caaagcgagc ttgcgactcg
      541 ccttgacacc ttggcacgcc accaactgaa cagttgagat gggttagaat caggggtttg
      601 ttaccttatt gcgccgcagc aaaccagtcg gcgcaccgaa gacggagtat ttacccatga
      661 aaacagcgca ggaactgcgt gttggcaacg tgatcatcat cgacggccaa gcccaggtgg
      721 tgcagcgcac cgagtacaac aagtcgggtc gcaatgcggc tgtggtcaag ctcaagctta
      781 agaacctgct caccgcctct ggcaccgaat cggtgtttaa ggcagacgag aagtttgacg
      841 tggtggtgct tgatcgtaaa gaatgcacct actcctattt tgccgacccc atgtatgtgt
      901 tcatggacga ggaatacaac cagtacgaag ttgaagccga cagcatgggc gatgcactga
      961 actatcttga agagagcatg agcgttgaag tcgtgtttta cgaggatcgt gctatttcgg
     1021 tcgaaatgcc caacgtcgtt gttcgcgaaa tcatctacac cgaacctgct gtgcgtggcg
     1081 acacgtcagg caaagtcatg aagcccgcca agatcaacac ggggtttgag ttacccgtgc
     1141 cgctgttttg tgacatcggc gacaagttcg aaatcgatac acgcaccggt gaataccgca
     1201 gccgctcggc gtcataatat gatgagccgg tgctgaaccg aagcacacaa taaaaaagcc
     1261 gctgggtcgt caaacgcagc ggctttttta ttgtgtcttc tttgtcgtgt tttcttattt
     1321 cgactctgct attgcaagcg atcatcgctt aagaaatccg gcactggcat gaccgcaata
     1381 ccgtcttcgg ctaattcctc gcgatcttga gcagatgcaa tgccacgaat cgaccgcgct
     1441 ggcgcctcac cttcgtgcat agcacgcgcc tcagttacga agtctgagcc gacatcttcg
     1501 gcactcctga ccgcttggcg cagataggac aggagctctg cctgaatttt ttgtaattca
     1561 gctgggattg gtgtgtgcgt gttac
//
LOCUS       DATBNL010000653         1734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_17374, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000653 DATBNL010000000
VERSION     DATBNL010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17374"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1488
                     /gene="phaC"
                     /locus_tag="VIC30_11105"
     CDS             <1..1488
                     /gene="phaC"
                     /locus_tag="VIC30_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEY7804964.1"
                     /translation="ELKDRRFADEAWRNSPMHAWMAHLYMLSGQAMKQLVDASHVDPD
                     TKEQLRFSVSQWVDALSPANFLATNPEAQQALVESGGKTLQTGIENFLNDLQKGRITQ
                     TDESQFEVGRNLAVSPGAVVFQNKYLEVIQYAPTTETVYQRPLLMVSPCINKYYIMDL
                     KPENSLVAYLVSQGFTVFMVSWRNPLPEDTDGIETATWDDYIEDGIIAAIDVAREISG
                     QPKINVLGFCVGGTMVTTALAVLAARRQSKVASLTLLATMLDFVDTGALGVFANEPHA
                     QMREQAIGAGGLMTARELSNTFSFLRPNELVWNYVVSNYLKGQTPVAFDLLYWNSDST
                     NLPGPFFTWYFRNTYIENKLCDPGAVKVCGHKIDFAKVQVPAYLLASKEDHIVPWQTA
                     YHSAAVLGGDCRFVLGASGHIAGVINPVSKNKRHYWVSDAELDVSPEQWFESAKENPG
                     SWWPDHTTWLKTHSGRRIKARQKLGSDDYPVREPAPGSYVKVRAV"
     gene            1565..>1734
                     /locus_tag="VIC30_11110"
     CDS             1565..>1734
                     /locus_tag="VIC30_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7804965.1"
                     /translation="MEKKLAYVTGGMGGIGTAICQRLAKEGMTVVAGCGPSRDYDRWL
                     KEQAEQGYQFYA"
BASE COUNT          408 a          408 c          492 g          426 t
ORIGIN      
        1 gagctcaaag accggcggtt tgccgacgag gcctggcgca attcacccat gcatgcgtgg
       61 atggcgcatc tctacatgtt gtcgggtcaa gccatgaagc aactcgttga tgcctctcat
      121 gtggatccgg atacaaaaga gcaattgcgg ttttctgtat cgcagtgggt tgatgcattg
      181 tcgccggcaa actttctggc gaccaatccg gaagcgcagc aagcgcttgt ggagtcgggt
      241 ggtaagacat tgcaaaccgg catcgagaat ttcttaaatg acctgcaaaa gggacgcatt
      301 acgcaaaccg atgagagtca gtttgaggtt ggacgcaatc ttgctgtcag ccctggcgca
      361 gtggtgttcc agaacaagta cctcgaagtg attcagtatg cgccaaccac agagacggtg
      421 tatcaacgtc cgttattgat ggtctcgcct tgcatcaaca agtactacat catggatctc
      481 aagccagaga attcactcgt ggcgtatctg gtgtcccaag gctttaccgt gttcatggtg
      541 tcttggcgta acccattgcc tgaggatacc gacggtattg agacggcaac ttgggatgac
      601 tacattgagg acggcattat cgcagccatc gatgtggcgc gtgaaatcag tgggcaaccc
      661 aagatcaatg tgctgggttt ttgtgtgggt ggcacgatgg tcaccaccgc attggcagtg
      721 ctcgccgcac gtcgtcagag caaggttgct tcattaacgt tgctcgcgac catgttggat
      781 tttgtggata cgggtgcgct tggcgtgttt gccaatgagc cgcacgcaca gatgcgagaa
      841 caagccattg gtgccggtgg tttgatgacc gcacgcgagt tgtccaatac gttctcgttt
      901 ttacggccca atgagttggt ctggaactat gtggtgtcta attacctgaa aggccaaacg
      961 ccagtggcgt ttgacctgct ctactggaac agtgacagta ccaatttgcc aggaccattt
     1021 tttacctggt acttccgcaa tacctacatt gagaacaagc tgtgtgatcc cggtgccgtg
     1081 aaggtctgtg gccacaagat tgattttgcg aaagttcaag tgccagccta cttgctggcc
     1141 tccaaagaag accatattgt cccttggcag acggcttacc actcagcagc ggtcctaggc
     1201 ggcgattgcc ggttcgtgct gggcgcctcg ggtcatattg caggcgtgat taacccggtt
     1261 tctaaaaaca aacgccatta ctgggtctcg gatgctgagc ttgatgtcag cccggaacaa
     1321 tggtttgagt cagctaaaga gaaccctggc agttggtggc ccgatcacac aacttggcta
     1381 aagacacatt ctggtcgacg catcaaagcc cgacaaaagc ttggcagtga tgactatccc
     1441 gtgcgtgaac ctgcaccagg cagttacgtc aaagttagag ccgtttaatt ttttaccgtc
     1501 agtttgcttt gtactcgggc gagctgatat tccaatatga aaagagtgac aggaggatga
     1561 gaccatggaa aaaaagttgg cgtatgtgac tggcggtatg ggtggcattg gaacggcgat
     1621 ttgtcagcgc ctagctaaag aaggcatgac ggtggttgcg ggttgtgggc caagccgtga
     1681 ctacgatcgt tggcttaaag agcaggccga acagggctat cagttttacg ctta
//
LOCUS       DATBNL010000654         2904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_107538, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000654 DATBNL010000000
VERSION     DATBNL010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107538"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1026
                     /locus_tag="VIC30_11115"
     CDS             <1..1026
                     /locus_tag="VIC30_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011764882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VC_2705 family sodium/solute symporter"
                     /protein_id="HEY7804966.1"
                     /translation="HVIIRFFTVKSVADARSSAGWALVFIALLYTTAPAVAAMARLNL
                     HTTMNPTIITNPEGIFQPDGAILNEDRPDWMKRWEVTGLLKWEDKNNDGRIQYYNDKS
                     TDAEFNQKAEAAGWKGNELSVNRDIIVMANPEIAMLPNWVIALVAAGGLAAALSTAAG
                     LLMAISSAVSHDLVKNVFKPDISEKGELMTGKVAMAISVIFAGYLGLNPPGFAAGTVA
                     LAFGIAGSSLFPAIMMGIFSKKMNKSGAMAGMVAGLGVTLFYVFAHKGIFFIQGTSYV
                     DLIGGPNSFFGITPEAFGAIGAGINFIVAFAVDKVTKEPPEHIQQMVENVRIPRGSTA
                     VTGDHYH"
     gene            1144..1536
                     /locus_tag="VIC30_11120"
     CDS             1144..1536
                     /locus_tag="VIC30_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008907339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7804967.1"
                     /translation="MVPDISTVIFWMLFLALFPISFTWLRRAWRILRNKDYSEVALIR
                     GESPPNAKRFAPYTAAVNLLAGLSLVLVILSVVLWIAFGIVLLNPDFQSWVAVAGSTL
                     WMKIIFDFLISRQAKVLIKQEQKKANAK"
     gene            1561..1899
                     /locus_tag="VIC30_11125"
     CDS             1561..1899
                     /locus_tag="VIC30_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012401051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEY7804968.1"
                     /translation="MLTNPWVLLTIAIVTEVIATSSLKASDGFTRLWPSVVVVIGYGI
                     SFYALALTMRTLPVGVIYAIWSGLGITLVTLVGWFVFKQHLSTHVLIGIGLTIAGVIV
                     MNLSPGAPSH"
     gene            1936..2715
                     /gene="nudC"
                     /locus_tag="VIC30_11130"
     CDS             1936..2715
                     /gene="nudC"
                     /locus_tag="VIC30_11130"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF001299.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HEY7804969.1"
                     /translation="MQHTRYWIIRHKQQVLIDTNNPLGPNFLPHADFLDGDHSEPVMI
                     GYWQGLPCDATDSRSMPEGFDAELVPLRQVFGVVGAEAFAMAGRASQLIDWQLNHQFC
                     GRCGHMTHLHDKDFAMQCDQCGLNAYPRISPAVMVLVRRGRELLLARSPHFKPGVFSA
                     LAGFVEAGETLEECAAREVKEEVGIDIDHLRYFSSQSWPFPNSLMVAFFAEYAGGDIT
                     PEPEEIEAADWFDIDNLPRLPDTVSIARRLIEGALAELTHN"
BASE COUNT          624 a          770 c          787 g          723 t
ORIGIN      
        1 cacgtgatca ttcgcttctt caccgttaag agcgtggctg acgcccgttc atcggctggc
       61 tgggcgttgg tcttcattgc gttgctctac accaccgcac ctgcagtggc tgccatggct
      121 cgcttgaacc tacacaccac catgaaccca accatcatca cgaacccgga aggcatcttc
      181 cagcctgatg gtgccattct gaatgaggat cgaccagatt ggatgaagcg ttgggaagtc
      241 acgggtcttc tgaagtggga agacaaaaac aatgatggtc gtatccagta ctacaacgac
      301 aagtccactg acgctgagtt caaccagaaa gccgaagcag ctggctggaa aggtaacgaa
      361 ctgtcagtaa accgtgacat catcgtgatg gccaaccctg aaattgccat gctaccgaac
      421 tgggtgattg ccttggtcgc agctggtggt ctggcagcgg cactctcgac tgcggctggt
      481 ctgttgatgg cgatctcatc agcggtctcg cacgatttgg tcaagaacgt gttcaagcct
      541 gacatcagtg aaaaaggcga actcatgacg ggtaaggttg ccatggctat atcggtgatc
      601 tttgctggat acctcggtct taatccgcca ggctttgcgg ccggtacggt ggcgttggcc
      661 ttcggtattg ccggctcgtc cttgttccct gccatcatga tgggcatctt ctccaagaag
      721 atgaacaaga gtggtgccat ggccggtatg gtcgcgggtc tcggtgtgac gttgttctat
      781 gtgttcgcac acaaaggcat cttcttcatc caaggcacga gctatgtcga cctgattggc
      841 ggccccaaca gcttctttgg catcacgcct gaagccttcg gtgccatcgg tgctggcatt
      901 aacttcatcg tcgcattcgc ggtcgataag gtgaccaaag agccacctga gcacatccaa
      961 cagatggtcg agaacgtgcg tatcccacgt ggttcaacgg ccgtgaccgg tgatcactat
     1021 cactaagcgg taagatgcac cggttagctg gcagtaaacg cgttgcgtaa actgccagct
     1081 aaccggggtg actcaaagcc ctgagggttt agcccaaagg gcttttttat tggagaagtc
     1141 aatatggtgc cggatatttc caccgtcatt ttttggatgt tgtttctggc gttgtttcct
     1201 atttcgttca catggttgcg acgtgcctgg cgcattctgc gcaacaaaga ctacagcgag
     1261 gtcgcgctga ttcgcggcga atcgcccccg aacgccaaac ggtttgcgcc ctacaccgcg
     1321 gctgtgaacc tactggccgg tttgtccttg gtgcttgtta ttttgtcagt ggtgctgtgg
     1381 attgcctttg gtatcgtgtt gttaaatcct gacttccaaa gctgggtggc tgtggctggc
     1441 tctacgctgt ggatgaagat catttttgat tttctgatta gccggcaagc caaagtgctt
     1501 atcaaacagg aacagaaaaa agccaacgcc aaataggctt ggcatgtcgt acggatgctt
     1561 atgttgacca atccttgggt cttgttgacc atcgccattg tcactgaagt gatcgccact
     1621 tcttcgctca aagccagcga tgggttcacc agactttggc caagcgttgt cgttgtcatt
     1681 ggctatggca tttcctttta tgcgttggcg ctaaccatgc gcacactgcc cgttggcgtg
     1741 atctatgcaa tctggtctgg gcttggcatc acgctagtca ccctcgtggg ttggtttgtt
     1801 tttaagcaac acctgagcac ccatgtcttg ataggcattg gcttaaccat tgcgggtgtc
     1861 attgtgatga acctgtcgcc aggtgcgcca agccattaag atggtgagac actaattgcc
     1921 aacgctgagc ttgccatgca acatacccgc tattggatca tccgccacaa acaacaagtc
     1981 ctgatcgata ccaacaaccc gctagggccg aactttctgc cccatgcgga ctttctcgat
     2041 ggtgaccata gcgaacccgt catgatcggc tactggcaag gcctgccttg cgatgccacc
     2101 gatagtcgtt caatgcccga agggttcgat gccgagcttg tgccgctgcg ccaagtgttc
     2161 ggtgttgtcg gtgctgaagc ctttgccatg gccggtcgtg cctcgcaact catcgactgg
     2221 cagctcaatc accagttttg tgggcggtgt gggcatatga cccacctgca cgacaaagac
     2281 tttgccatgc agtgtgacca atgtggctta aacgcctacc cccgcatatc gccggcggtg
     2341 atggtgctgg tgcgccgcgg ccgggagtta ctgcttgcac gcagccctca cttcaaaccc
     2401 ggcgttttta gtgcgctggc cgggtttgta gaagcggggg agacgctcga agaatgcgcg
     2461 gcacgtgagg tcaaagaaga ggtgggaatc gatattgatc acctcaggta cttcagcagc
     2521 caatcgtggc ccttcccgaa ctcgctgatg gtggcgtttt ttgcggaata tgctggcggc
     2581 gatatcaccc ctgaacccga agaaatcgaa gccgctgact ggtttgatat tgacaacctg
     2641 ccacgcttgc ccgacaccgt gtcaatcgcc cgacgtttaa ttgaaggtgc cttggccgag
     2701 ctcacgcaca actaagtgtt gcgctagcgc agccttgagc agcgcacagt ggtttgctat
     2761 tcaatcaaat tgtcggtaaa tattgacaaa tacctacaat atgtaaaaat gctcatatga
     2821 acaatactca tgaccacatt gtagataccg tccgacgagg tgggctgatg cgcgctcgcg
     2881 acgcgcatgc gcatgggttc accc
//
LOCUS       DATBNL010000655         1923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_97396, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000655 DATBNL010000000
VERSION     DATBNL010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97396"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VIC30_11135"
     CDS             <1..266
                     /locus_tag="VIC30_11135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="secretion protein HylD"
                     /protein_id="HEY7804970.1"
                     /translation="AMARWWLREKLFVFGDPMPEEADTRKRRAMVLFAWLTWIYRFVV
                     FLGIAILVYQFFFKALGIVLFVIELWYFVARPSPMSCWLGANA"
     gene            245..1210
                     /locus_tag="VIC30_11140"
     CDS             245..1210
                     /locus_tag="VIC30_11140"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEY7804971.1"
                     /translation="MAWRKRLKLEAEQTSGAATQGVGNSSGARPPRKRRPVVYLAWGL
                     FLLLVVPFDVTINAQGVLKPARSTEVIAPVPAQVLMLPPAIGTELAPGDVLMEMAAPD
                     TEHRIELLQTRVQILSRHAASAGFADDAKAEQAILREQLTSAQKELAGLTAQSKRLVP
                     TAPFAGQIMDVVPDIHVGDWVPKGQQLATFADPTSWMVDTYVQESDLQRLAVGNWARF
                     VPDAPGLPAVNLKVVEVDQDASRTLLDPELGAQAGGDILVRQSGQSLIPERSVFRVRL
                     QVQGDPGQVSTGHIRGSVAILGWPRSILGEFLRGTFTTLVREFGF"
     gene            1568..1888
                     /locus_tag="VIC30_11145"
     CDS             1568..1888
                     /locus_tag="VIC30_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018914866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /protein_id="HEY7804972.1"
                     /translation="MKQDHYSYRVTWSAEDQAHVGLCVEFGSLSWLAPTPEKALAGIR
                     KVVAEVVADMQTAGETVPAPLAEKQFSGRFVVRVPGSVHRALAIEAAEQGVSLNRLVS
                     AKLS"
BASE COUNT          391 a          472 c          587 g          473 t
ORIGIN      
        1 ttgcgatggc acgttggtgg ttacgagaga agctctttgt gtttggtgac cccatgcccg
       61 aagaggccga tacgcgcaag cgtcgagcca tggtgctgtt tgcctggctg acttggatat
      121 atcggtttgt ggtgttttta ggtatcgcga ttttggtgta ccagttcttt tttaaagcgc
      181 tgggcattgt gctgtttgtc attgagcttt ggtacttcgt ggctcgacca tcaccaatga
      241 gttgttggct tggcgcaaac gcctaaaact cgaggctgag caaacctcgg gtgctgcaac
      301 ccaaggtgtg ggcaactcaa gcggtgcgcg accaccgcgc aagcgccgac ccgtggtgta
      361 tttggcctgg ggcttgtttt tgttgctggt cgtgcccttt gatgtgacga tcaatgcgca
      421 aggggtgctt aaacccgcac gtagtaccga agtgattgca ccggtaccgg cgcaagtgct
      481 gatgttgccg ccagccattg gtacggaact tgcgcccggt gatgtcttga tggagatggc
      541 tgcccccgat actgagcatc gcattgagct gttgcaaacc cgggtgcaga tactgtctag
      601 gcacgcggct tcagccgggt ttgcagacga tgccaaagct gaacaagcca tcttgcgaga
      661 gcagttgacc tcagcacaaa aggagcttgc tgggctgacc gcgcagagca agcgcttggt
      721 acccactgca ccatttgccg gtcaaatcat ggatgtcgtg cccgacattc acgtcggtga
      781 ctgggtaccc aaaggccagc agttggcgac ctttgctgac cccacgagtt ggatggttga
      841 tacctacgta caggaatcag acttgcaacg tttggccgtg ggtaactggg ctcgtttcgt
      901 gccagatgcc cccggactgc cagcagtcaa tctcaaggtg gtggaggtcg atcaggatgc
      961 cagtcgcacc ttgctcgatc cagagctggg ggcgcaggcc ggaggcgata tcttggtgcg
     1021 acaaagtggc caaagtctga taccggagcg ttcggtgttt cgggttcgct tgcaagtcca
     1081 aggtgacccg ggtcaagtgt ccacgggcca catccgtggc agtgtggcga tcttgggttg
     1141 gccacgctcg attctgggcg aatttctgcg gggcaccttc acaacgctgg tcagggaatt
     1201 tggattctag atcctttcag cgattcgctc cagcgatcca ttccagcgat ccattccagc
     1261 tatttgagtc gatgcctagg cagggggttg atcgcgggcc ccgcgcaacc tattggttct
     1321 tgccgtggtg cgtttgggta tgtcgctgcc atgcattcgg tctttctatt gacattgata
     1381 gtgatactga tagtgatact atgtttacaa gtcgagcaga aaaaatattg agacaaatgc
     1441 gtggtgagct aatgaaaggt cgctttgcgg atatcaagca gctatcacac agatatcaat
     1501 tgcatctgcg attggtgtga tgggtcaacg tgctcgaggc aatcgacaaa ttaggggtac
     1561 attgataatg aaacaggacc actacagcta tcgagtgaca tggtcggctg aggatcaagc
     1621 gcatgtcggc ctgtgcgttg aatttgggtc cttgtcatgg cttgcgccca cgcctgagaa
     1681 ggcgttggcg ggtattcgga aagtggtggc agaggtcgta gccgatatgc agaccgcagg
     1741 tgaaactgtg cctgcgcctt tagctgagaa acagttcagt ggccgatttg tcgtgcgtgt
     1801 gccaggctcg gttcaccgag cactggccat tgaggcggct gagcagggcg tgagtctaaa
     1861 ccgactggta tcagccaagc tttcctgatt gcaccagcgc ctcaatctcc tggcgtgcca
     1921 cag
//
LOCUS       DATBNL010000656         2275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_67726, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000656 DATBNL010000000
VERSION     DATBNL010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67726"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..996
                     /locus_tag="VIC30_11150"
     CDS             70..996
                     /locus_tag="VIC30_11150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013594464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7804973.1"
                     /translation="MAELFEIVSQGNFWVAVLRLATPLLFGVLGVLLCERAGVLNLGI
                     EGIMVAGAFAGWLAVYLGASLWTGVLIAAGVGALFGLLHAFLTVFLALSQHVSGLGIT
                     MLATALSYYGYRMMFADMSSPPTVETFSEMTELAIPILGQQTPLTLLALLLVPAIGWL
                     LYRTPFGLAIRMVGENPHAAQGQGVSVHLTRTISIMAGSALMGIAGAFLTLAAFNAFF
                     FNMINGRGWICVALVVFGSWRPGKALIGALLFAFFDALQIRLQTTPGADVIPYQLYLM
                     LPYVLSIVALIVVARRASYPQALMKPYRKGER"
     gene            1029..>2275
                     /locus_tag="VIC30_11155"
     CDS             1029..>2275
                     /locus_tag="VIC30_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008904820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY7804974.1"
                     /translation="MFDLLIRHANLPDDRTEMSVAISDGRIVDVQPDATLATAQSAQE
                     IDACGQLLAPAFVDAHFHLDAALRYGQPRVNASGTLLEGIELWGELKPTLTQDAIIDS
                     ATRYCQWAVANGLLAIRSHVDVSDPNLLAVQALLQVKAQIKPYLDLQLVAFPQDGVLR
                     NPGAIDNVKRALDMGVDVVGGIPHFERTMAEGAQSVRLLCELAAERGVMVDMHCDESD
                     DPMSRHVESLAFETQRLGLQGRVTGSHLTSMHSMDNYYVSKLIPLMAEAGLNVIANPL
                     INITLQGRHDTYPKRRGMTRVPELMQAGLNVAFGQDCVMDPWYSLGSGDMLEVAHMGL
                     HVAQMTSQSGMRQCFEAVTTNAARALNLQDYGLAPNCHADLVLLQVSDPVEAIRLRAT
                     RLAVIRRGEIVAQTPARAALLQWG"
BASE COUNT          435 a          636 c          660 g          544 t
ORIGIN      
        1 cgccaccgcg ttgctggcgg tcttggttgc cacagcactg acgcaatacc gtttgaggtg
       61 gcgctgatga tggctgagct gtttgagatc gtcagccaag gcaacttctg ggtggctgtg
      121 ctgcgtctgg ccacgccact gttgttcggt gtgctcgggg ttttactgtg tgaacgcgct
      181 ggggtgctga acctaggtat cgaaggcatc atggtggctg gcgcctttgc cgggtggcta
      241 gcggtgtacc taggagcctc actttggaca ggcgttctga tcgctgcagg cgtgggtgcc
      301 ttgtttggac tgttgcatgc tttcttaacc gtcttcttag cgttgtcaca acacgtctcc
      361 ggtcttggca tcacgatgct ggctacggcg ctcagttact atggctatcg catgatgttt
      421 gccgacatgt cgagcccgcc cacggttgag acgttctcag agatgaccga gctggcgatt
      481 cctattctcg gtcagcaaac cccgctgacc ttactggcct tgttgctcgt gcccgccatc
      541 ggctggctgc tgtatcgaac gccctttggt ttggccatcc gcatggttgg cgagaatccg
      601 catgccgccc aaggccaagg tgtctcggtg cacttgaccc gaacgatctc catcatggca
      661 ggttcagcgc tcatgggaat tgctggtgcg tttttaacgc ttgcagcctt taacgccttc
      721 tttttcaaca tgatcaacgg ccgtggttgg atctgtgtgg cgttggtcgt gtttggttcg
      781 tggcgtccgg gcaaagccct gattggtgcg ttgttgttcg cattttttga tgcgctacag
      841 attcgcttac agaccacgcc gggtgctgat gtcataccct atcagctcta cttgatgctg
      901 ccctacgttt tatcaattgt tgccctcatc gtggtggcac gccgggcctc ctacccgcaa
      961 gcactcatga aaccctaccg taaaggggag cgttaagatg ccagaccaaa gcccacgagc
     1021 acatgcccat gtttgattta ttgattcgcc atgccaactt gcccgatgac cgcaccgaga
     1081 tgtcggtggc cattagcgac ggtcgtatcg ttgatgtgca acccgatgca acactggcca
     1141 ccgctcaaag tgctcaggag attgatgcct gtggtcaatt gctagcaccg gcctttgtcg
     1201 atgcgcactt ccatctagac gctgcattgc gttatggcca accgcgggtc aatgccagtg
     1261 gtacgttgct tgaaggcatt gaactatggg gcgaactcaa accgacgctc acgcaagacg
     1321 cgatcatcga tagtgcgact cggtactgtc agtgggccgt ggccaatggc ttgctggcca
     1381 ttcgcagtca cgttgatgtt agtgacccaa atttattggc cgtccaagcc ctgttgcagg
     1441 tcaaagcgca gatcaaacca tatttggatc tgcagttggt ggcattcccg caagacggtg
     1501 tgctcagaaa ccctggggcg atagacaacg tcaaacgggc gctggacatg ggcgtggatg
     1561 tcgtgggtgg cattccgcac tttgaacgaa cgatggccga aggcgcacaa agcgtgcgcc
     1621 tgctgtgcga actcgccgcc gagcgcggtg tgatggttga catgcattgc gacgaaagcg
     1681 atgacccgat gtcccgtcac gttgaaagcc tggcgtttga gacgcaacgc cttggcttgc
     1741 agggacgtgt cacgggctcg cacctgacct ccatgcacag catggacaac tactacgtca
     1801 gcaaactcat cccactgatg gctgaagccg gcttaaacgt catcgccaac ccgctgatca
     1861 acatcacgct ccaaggccgt cacgacactt accccaagcg tcgcggcatg acgcgggtgc
     1921 ccgaactcat gcaggctggc cttaacgtgg cgttcggaca agactgcgtg atggacccgt
     1981 ggtacagcct gggttcaggc gacatgctcg aggtcgcgca catgggtctg catgtggctc
     2041 agatgaccag tcagtcgggt atgcgccaat gtttcgaggc ggtcaccacc aatgccgcgc
     2101 gcgcactcaa cctccaagac tacggcttag caccaaattg ccacgccgat ttggtcttgc
     2161 ttcaagtcag tgatcctgtc gaagcgattc gactgcgtgc cacccgattg gcggtaattc
     2221 ggcgtggtga gattgtggcg caaaccccag ctagagcggc gttacttcaa tgggg
//
LOCUS       DATBNL010000657         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167570, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000657 DATBNL010000000
VERSION     DATBNL010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167570"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VIC30_11160"
     CDS             <1..357
                     /locus_tag="VIC30_11160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEY7804975.1"
                     /translation="FGHPVYTIADPRNEVIKSVAQRLSKKANNMKMYNIAERLEAVMW
                     DVKKMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTAGWSAHIIEQRVDNKIIRPTAN
                     YVGPENLKFVPISRRK"
     gene            491..>2143
                     /gene="acnA"
                     /locus_tag="VIC30_11165"
     CDS             491..>2143
                     /gene="acnA"
                     /locus_tag="VIC30_11165"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEY7804976.1"
                     /translation="MNTAYRKPLPGTDLDYFDARQAVDDIEPGAYDKLPYTSRVHAEN
                     LVRRCDPALLTDALKQLIERRRDLDFPWFPARVVCHDILGQTALVDLAGLRDAIAAKG
                     GDPAAVNPVVPTQLIVDHSLAVECGGFDPDAFEKNRAIEDRRNEDRFHFINWTKKAFK
                     NVDVIPPGNGIMHQINLERMSPVVHSRDGVAFPDTLVGTDSHTPHVDALGVIAIGVGG
                     LEAENVMLGRASWMRLPHIIGVKLTGKPQPGITATDLVLALTEFLRNAKVVSAYLEFF
                     GEGASHLTLGDRATISNMTPEYGASAAMFYIDEQTIDYLRLTGRDDKQVELVENYAKQ
                     TGLWADTLKNAEYERVLEFDVSSVVRTIAGPSNPHRRVSTSDLAAQGISGVVENEPGL
                     MPDGAVIIAAITSCTNTSNPRNVISAGLLARNANALGLTRKPWVKSSLAPGSKAVELY
                     LQESNLLAELEKLGFGIVAFACTTCNGMSGALDPKIQQEIIDRDLYATAVLSGNRNFD
                     GRIHPYAKQAFLASPALVVAYAIAGTIRFDIEKDVLGTDKDGN"
BASE COUNT          504 a          596 c          553 g          490 t
ORIGIN      
        1 tttggccatc cggtctacac catcgccgac ccgcgcaatg aagtgattaa gtccgttgct
       61 cagcgcctgt caaagaaggc caacaatatg aagatgtaca acattgcaga acgccttgag
      121 gcggtgatgt gggatgtgaa aaaaatgttc ccgaaccttg actggttctc ggccgtttcg
      181 tatcacatga tgggtgtgcc aacggccatg ttcacccctt tgttcgtgat cgcgcgcacc
      241 gcaggttggt cggcacacat cattgaacag cgcgtagaca acaagatcat ccgcccaaca
      301 gccaattacg tgggtccaga gaacttgaag tttgtgccca ttagccgtcg caagtagtag
      361 cacgtgtcag cacgtagcaa caagtattag caagtagtcg taaatttgcc tgaggggaca
      421 ttcccttcgg gcagcagcac gcaccgcgac ttgcgctttg tcctagtcgc cttttataag
      481 cgagaccgcc atgaacactg cataccgcaa acctctgcca ggaaccgacc ttgattactt
      541 cgatgcgcgt caagccgtcg atgacattga gccaggtgcc tatgacaaac tgccgtatac
      601 atcgcgggtc catgccgaaa atctggtgcg tcgctgcgac ccagccctat taaccgatgc
      661 gcttaagcag cttatcgagc gccggcgtga tctggacttt ccgtggtttc ccgctcgtgt
      721 ggtctgtcat gacattcttg gacaaaccgc attggttgac ttggctggtt taagagatgc
      781 cattgcagcc aagggcggag atccggctgc tgtcaatccg gtcgtcccca cacagctcat
      841 tgttgaccat tcattggccg tcgagtgtgg cggatttgat ccggacgcat ttgaaaaaaa
      901 tcgcgccatt gaagatcggc gcaatgaaga ccgtttccac ttcattaact ggaccaagaa
      961 agcattcaaa aacgtcgatg tcatcccgcc aggcaacggc atcatgcacc agatcaacct
     1021 tgagcgcatg tcaccggtcg tccattcacg cgatggcgtg gcatttcccg atacgcttgt
     1081 cggtaccgac agccatacgc cgcacgttga cgccttgggc gtgatcgcca ttggcgtggg
     1141 tggcttggaa gcagaaaacg tcatgctcgg gcgcgcctct tggatgcgct tgccacatat
     1201 cattggtgtc aagctgactg gcaaaccaca gcctggcatc acagccaccg acttggtatt
     1261 ggcactgacc gagttcttgc gcaatgccaa agttgtctcg gcctatctcg agttctttgg
     1321 cgaaggcgct tcgcatttga cattgggcga ccgtgccacc atttcgaaca tgacacccga
     1381 atatggcgca agcgctgcca tgttctacat tgacgaacaa accatcgatt acctgcgctt
     1441 gaccggtcgc gacgacaagc aagtcgaatt ggtcgaaaac tatgccaagc aaacaggcct
     1501 ttgggctgac acgctgaaaa acgcggagta tgagcgcgtg ctcgagtttg atgtttcttc
     1561 ggtcgttaga accatcgccg gaccttcaaa cccccatcgt cgtgtatcga ctagcgactt
     1621 ggcggctcaa ggcatctcgg gcgtggttga aaacgaaccg ggtctcatgc cagacggcgc
     1681 agtcatcatc gcagcaatta caagttgcac gaacaccagc aatccacgga acgttatctc
     1741 agctggcctc ttagcgcgca atgccaatgc gctgggctta acacgcaagc cctgggtcaa
     1801 aagctcgcta gcacccggct ccaaagcagt ggagctttac ctgcaagaat cgaatttatt
     1861 ggctgaacta gaaaagcttg ggttcggcat cgttgccttt gcctgtacga catgtaacgg
     1921 catgagcggt gcactcgatc ccaagattca gcaagaaatc attgatcgcg acctctacgc
     1981 cacggccgta ctttcgggca accgaaattt tgatggtcgt attcacccgt atgccaaaca
     2041 ggcctttttg gcgtctcctg cacttgtggt ggcctatgcc attgccggca ctatccgctt
     2101 tgatattgaa aaagatgtgc tgggcaccga caaagacggc aat
//
LOCUS       DATBNL010000658         6440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_157535, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000658 DATBNL010000000
VERSION     DATBNL010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6440
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157535"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VIC30_11170"
     CDS             complement(<1..299)
                     /locus_tag="VIC30_11170"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY7804977.1"
                     /translation="MADTNNLSAIGPRIRAARQAKRLTQVHLSGALGFNDRQTLSDIE
                     NGKRIVKPQELVTISDILHRDVDYFLDPFSVAGVAKYNWRAAPDVPASDLDSFEA"
     gene            complement(726..2027)
                     /locus_tag="VIC30_11175"
     CDS             complement(726..2027)
                     /locus_tag="VIC30_11175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804978.1"
                     /translation="MDVSMIGLIVAVIMLVLLASGVWVAVTLMSVGLISMLAFSHAPA
                     ASIQSTVIWGQSSSWALTALPLFIWMGEILYRTRLAKDMFEGLTPWLAGFPGRLIHIN
                     VVSCGIFAAVSGSSAATTATIGRITIPELLKRGYDEKTTIGSLAGSSTLGFLIPPSII
                     MIVYGVAADVSITRLFIAGVLPGAMLMALFMGYLAIWSMLNPSKVPPRDERVPIMRRI
                     WETRKLFPIVALMIAVIGSIYMGVATATEAAAVGVVGALLIALFTGSLNRKSFIDSVL
                     GATRTSVMVSFILAGAAFLSTAMGFTGIPRELAAWVGTLGLDKFELLLALTLLFIVLG
                     CFLDGISIVVLTAAVIMPITQQAGIDPIWFGIFIVVVIEMSQITPPVGINLFILQSMT
                     GRNIWEVAKAAFPFFMLLVVATILLIVFPEIATWLPDTIRQ"
     gene            complement(2031..2543)
                     /locus_tag="VIC30_11180"
     CDS             complement(2031..2543)
                     /locus_tag="VIC30_11180"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY7804979.1"
                     /translation="MFSRFLDRLFTWSGYLAGIFLVTIAVLVVAQIVARFLGHQIPSA
                     DEFAGYSLAASSFLGLAYSFRSGSHIRVTLLTARLPSKAQRVLMLLVLAFTAVMIAIW
                     AYNSMTLVWESYEFQEMSTGILRYPIWIPQLSMGIGVTLFCMAILEDLVNVLRDKEPN
                     FEKNKETMVD"
     gene            complement(2608..3573)
                     /locus_tag="VIC30_11185"
     CDS             complement(2608..3573)
                     /locus_tag="VIC30_11185"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY7804980.1"
                     /translation="MKFTKSLVAATALTALSFGAVAQTNWNMATPYPESEFHTKNIQQ
                     FVADVNKMSDGDLNIKVHSAQSLFKHPEIPRAVRTGQVEIGETLMANLSNQDPVFQVD
                     AIPFLVTGYESAQKLWQGQRPFVEKYLSDNGMRLIYAVPWPGQGFYMKNEVKSIADME
                     GVKFRTYNSTTEKMASLMKAVPTTVEAVEIPQAFTAGIVDAMVTSAATGVRTEAWTFA
                     NYYYDTQAWMPKNMIYVNEKAFKRLSPKAQKALIDAGKTAETRGWKMSEEVFTETTNT
                     LKEKMQYRQANEDLSKSLAQIGDVMSVSWAEAVGPNAEKILAPLR"
     gene            3982..4596
                     /locus_tag="VIC30_11190"
     CDS             3982..4596
                     /locus_tag="VIC30_11190"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014193467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEY7804981.1"
                     /translation="MFYEPSQGHGLPFNPFKAIIAPRPIGWVSTMDAQGRVNLAPYSF
                     FNAVSGKPEMLMFSSEGLKDSVRNAQETGEFVYNLVSESLLQGMNQTAAALEPGENEF
                     EFAKLGAVPSKLVKPPRVADTPAALECKVTKILPLEDLDGQTHDRYMVIGQVVGVHIA
                     DEYLVNGRFDMLKAQTMARCGYQDYSQVTELTQLLRPGEAPLKI"
     gene            5181..5462
                     /locus_tag="VIC30_11195"
     CDS             5181..5462
                     /locus_tag="VIC30_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018027459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7804982.1"
                     /translation="MIRSFKHKGLQLFFEAGVKSGIQASHANRLRRQLAVLDDARNPD
                     NMNVPGWRLHPLKGFENRGRWAVTVNANWRLTFAFDWGHAVFVDYQDYH"
     gene            5472..5765
                     /locus_tag="VIC30_11200"
     CDS             5472..5765
                     /locus_tag="VIC30_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEY7804983.1"
                     /translation="MQMHNPPHPGSIIREDVLPELGLTVTESAKQLGVSRVQLSRFIN
                     EHAAVTPELAMRLAQWIGAPTARTWLQMQVDYDLWQLSKKKPRLNVIPVKRRG"
     gene            complement(6325..>6440)
                     /locus_tag="VIC30_11205"
     CDS             complement(6325..>6440)
                     /locus_tag="VIC30_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021141233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7804984.1"
                     /translation="MAKSKNSLWSPSYFASSTGEAPIEVLKRYIQEQNRPE"
BASE COUNT         1610 a         1638 c         1707 g         1485 t
ORIGIN      
        1 tgtgcttcga agctatccaa gtcggatgcc ggaacgtcag gtgctgcccg ccaattgtat
       61 ttagcgacac ctgcgacaga gaagggatct aggaagtagt caacgtcgcg atgcagaatg
      121 tcactgatgg tcacgagttc ctgaggttta acgatgcgtt taccgttctc tatgtcggac
      181 agcgtctggc gatcattaaa tccgagtgcc ccagataggt gtacctgcgt caagcgcttt
      241 gcttgccgtg ctgcccgtat acgtgggccg attgcactca ggttgtttgt gtctgccatt
      301 gcgtgccaag tttttctaga tatttcttgc gaaacgtatt ttgcaagatt atagcttaaa
      361 ttattatctt tttggcaata ggttggtgtc atcaaaaaaa ctaacgccaa cgccgatggg
      421 cgtgttggcc cttgtccgat gcagcgccat gggtcaggtc aatcgaatca actactcgaa
      481 ggcgaatgcc ggtcaacagc tgagttgcta tgtggacatc ggggcgaggc ttatggcttt
      541 acgggtgtcc cattaaagcg ttcgcttcaa gactatggcg ggaataggtt tgagtggttg
      601 cctcaggcat gatcaatcat gtgttgactc atacgtgaat caaaatccca atcagacaag
      661 gcaccgctga tcggtgcctt gtctgatttc tcgcgcttgc tattgttatt gacggtcggc
      721 tactgctact gccggatcgt gtctggcagc caggtggcga tttcagggaa cacgatcaag
      781 agaatggtcg caaccacgag caacataaag aacgggaagg cagctttggc cacttcccag
      841 atgttgcgtc ctgtcatgga ctgcaggata aagaggttaa tcccaaccgg tggtgtgatt
      901 tgggacattt cgatgaccac cacgataaag ataccgaacc agatcgggtc gataccggct
      961 tgctgcgtaa tcggcatgat gactgcagcg gtcagcacca caatcgagat gccatccaga
     1021 aaacatccca acacaataaa caacagtgtt agtgccagca gcaactcgaa cttgtctagc
     1081 ccaagtgtgc caacccaggc agcgagttca cgaggaatgc cggtaaagcc catggctgtt
     1141 gacaagaacg ctgcaccggc cagaatgaac gacaccatga cgcttgtgcg tgtggcaccg
     1201 agtacgctgt caataaagct ctttctgtta agcgacccag tgaacagtgc aatcaataag
     1261 gcaccgacca caccgacagc cgcggcttcg gtggccgtgg caacccccat ataaattgaa
     1321 ccgataacgg caatcatcag ggccacgatt ggaaacagct tgcgggtctc ccagatgcga
     1381 cgcatgatgg gcacgcgctc atcacgcggt ggtactttag acgggttcaa catggaccag
     1441 atggccaggt aacccatgaa cagtgccatg agcatggcgc ctggcaagac gccggcgata
     1501 aatagccggg taatggagac atctgcggcc acaccataca caatcatgat gatggacggt
     1561 ggaatcagaa agcccaaggt ggacgagcca gctaggctgc cgatggtggt tttttcatca
     1621 tagccacgct taagcaactc agggatggtg atgcgcccga tggtagcggt ggtcgcagct
     1681 gatgaaccgg acaccgcagc aaagatgccg caactaacca cattaatgtg aatcagccgc
     1741 cccggaaagc ctgccaacca aggtgtcagt ccctcaaaca tgtctttggc cagacgggtg
     1801 cgatacagaa tctcacccat ccagataaac aagggcaggg cggttagcgc ccagcttgag
     1861 ctttgccccc agatgacagt ggactgaatg ctggctgccg gcgcgtgcga gaaagccagc
     1921 atgctgatga gaccaaccga catcaaggtc accgcgaccc agacgcccga ggccagcagc
     1981 accagcatga tgactgccac gatcaaaccg atcattgaga cgtccatgcc ttagtccacc
     2041 attgtttctt tgtttttttc gaaattcggc tctttgtcgc gcagcacatt cacgaggtcc
     2101 tcaagaatcg ccatacaaaa gagcgtcaca ccaatgccca tgcttaactg cggtatccag
     2161 atgggatatc tcagaatgcc cgtggacatt tcttggaact catagctttc ccaaaccagc
     2221 gtcatcgagt tgtacgccca gatggcgatc atgaccgcag taaaagccaa taccagcagc
     2281 atgagaaccc gttgcgcctt ggatggcagg cgcgctgtta gcagcgtgac acggatgtgg
     2341 gagcccgagc gaaacgaata agctagcccc aaaaagctgc tggcagctaa gctgtagccg
     2401 gcgaactcgt cagctgaagg aatctggtga cccaaaaacc gagccacgat ttgggcgacc
     2461 accagtaccg caatggtcac taagaagata cccgccagat aaccgctcca ggtgaagagc
     2521 cgatccagaa atctactgaa catggtgtgt tgttccagca aaaacaaagc cggcggtgtg
     2581 cgccggcttt gtgaccacaa ggtcaggtta gcgcaaaggc gccagaatct tttctgcgtt
     2641 tggacccacg gcttcggccc atgagacaga catcacgtca ccaatttgtg ccaaagattt
     2701 ggaaaggtcc tcgttggctt gacgatattg catcttctct ttgagcgtgt tggtggtttc
     2761 cgtgaacacc tcttcgctca tcttccagcc acgggtctcg gctgttttac cagcgtcgat
     2821 cagggctttc tgagctttag ggcttaagcg cttgaatgct ttctcgttca cgtagatcat
     2881 gttcttaggc atccacgctt gcgtgtcgta atagtagttg gcaaacgtcc aagcttcggt
     2941 acgcacaccg gtggcagccg acgtcaccat ggcatcaacg ataccggcgg tgaaggcttg
     3001 tggaatctca acggcttcaa ccgtggtggg cacggctttc atgagagaag ccattttctc
     3061 ggtagtggag ttatacgtac ggaacttcac cccttccatg tcagcgatcg acttgacttc
     3121 gtttttcatg tagaagcctt ggccgggcca tggcacagcg tagatcagac gcatgccgtt
     3181 gtcagacaaa tacttctcga caaacggacg ctgaccttgc cagagctttt gtgctgactc
     3241 gtagcctgta accaaaaacg gaatggcatc aacttggaag acgggatctt ggttcgagag
     3301 attggccatc aacgtctcac cgatttcaac ttgaccggtg cgaacagcgc gagggatttc
     3361 cgggtgctta aacagtgact gagcagagtg gactttgatg ttcaagtcac cgtccgacat
     3421 tttgttgaca tcagcgacga actgctggat gtttttggtg tggaattccg actcagggta
     3481 aggcgtggcc atgttccagt tggtttgggc cacagcacca aaagacaggg cggttagtgc
     3541 agttgctgct accagacttt tcgtgaattt catgtctgtt ctccaggtta agtgtccacc
     3601 aaagtagtca ctgtttttta aaaacgttcc aaacatcggt gaccaagatt agcaacattc
     3661 cacactggat acaacaaatc aacgcataaa tataacgaac ttgcggaaag tcttaactcg
     3721 gcgcaaagcc ccgtgggcac tggctttgtg catcgcacac taaaaccgtg caacgctgca
     3781 ctaactaggt gttaacacta aggtttaggg tgtttaagcc gacaaacgaa acagcaaacc
     3841 tcgaacaaat attctgctcg ccaacttgct atagtcgcga ttaattgggc agcgcagcta
     3901 cccgccgaga agtaataacc gaacggcaca taaccgaaca gcaaacaacc aaatagcaaa
     3961 taacaaccgg gagacaccac catgttttat gaacccagcc aaggccacgg cttgccgttt
     4021 aatccgttca aagccattat tgcgccacgc cccattggtt gggtatcaac catggacgcg
     4081 caaggccgag tcaatctcgc tccttacagt ttctttaatg cggtgtcggg taaacccgag
     4141 atgctgatgt ttagtagcga gggcttaaag gacagcgtgc gtaacgcgca agagaccggt
     4201 gagtttgtct acaacctggt gtctgagtca ttgctgcagg gcatgaacca aacggcggcc
     4261 gcacttgagc ccggagagaa cgaatttgag tttgccaagc tcggtgctgt gccaagcaaa
     4321 ttggtcaagc caccgcgtgt ggcagatacc ccggcagcgc ttgagtgcaa ggtcaccaag
     4381 atcttgccct tagaagacct cgatggccag acacatgacc gctacatggt gattggtcag
     4441 gtggttggtg tgcacatcgc tgatgagtat ctggtcaatg gtcgctttga tatgctcaag
     4501 gctcaaacca tggcacgctg tggctaccag gattattcgc aggtgaccga actcacgcaa
     4561 ctgctgcgac caggtgaggc accactcaaa atctaggtgc acagagctcg gatgctcaag
     4621 aaactcggat cctcaagact taggtgcttg gctgcctaga aaatcagagt aatttgcaaa
     4681 agcaaagcaa atacgggtga gccaggccga tgtatcacgc cagtgactga agtttgagag
     4741 taggtgctga accttctcgc ccctgcgtcg tccttcttcc cctttgatgc tcatatgcct
     4801 cgcggcttta tggtgcccct ttgtgttgcc ccttcatgtt gctcctgata ggggcgggta
     4861 tccataacca cgacccaaag cgctgcgttt gtgatgccct gcgagggcaa acccaccaag
     4921 ccgcactagg gcattgcaac cacattgtct gcgtcctgtt tcttaatcat gcgatcctga
     4981 cgctacgtgt tcgggttggc aatcaacgaa gctcggtgtg ccagaggtgt ggcagaggtg
     5041 cagctaaaac gggcagggtt gccagcccgg atcaagcgta gccattgatg tacatctcct
     5101 aagtactcac cgcgcttcca ctggcagtgc tgagtgatta caccgctatg ttaagtgtaa
     5161 cgttatagga tacaatttgg atgataagaa gcttcaaaca caaaggactt cagttatttt
     5221 tcgaagcggg tgttaagtcg ggcattcaag ctagtcatgc aaatcgattg cgtcgtcaac
     5281 tcgctgtgct agacgacgcg cgtaacccag acaacatgaa tgtgccaggc tggcgattgc
     5341 atccgttaaa ggggtttgag aaccgaggcc gctgggctgt caccgtcaac gctaattggc
     5401 gcctgacgtt tgctttcgat tgggggcatg ccgtgttcgt ggattatcaa gactatcatt
     5461 aggaatacgc tatgcaaatg cacaatcctc cacatcccgg ttcgatcatt cgtgaggatg
     5521 tgttgcccga attaggtttg accgtcaccg aaagcgcgaa gcagctcggc gtgtcgcgtg
     5581 tgcaactatc acgtttcatt aacgagcatg cggctgtcac gccagagctt gccatgcgac
     5641 tggctcagtg gattggggca ccgacagcac gtacgtggtt gcagatgcag gttgactacg
     5701 atttgtggca acttagcaaa aagaagcctc gattaaatgt catcccggtc aagcgccggg
     5761 gataagtgca gcggggcttt acgcgcaaaa cggtaagggc ctttatgttg atcctgatgc
     5821 atccattaag gcatccgtag ccacgccata gccacgcccg atgcttttga ttttagaaat
     5881 ctaggcgtca aagagatcgg cgatcgaaaa tagtaaagta aacataaacc gaatagtaaa
     5941 gtaaagtcga attaaatagt aaagtaaact gtcagtcagg cgcactgagc cgcactgagc
     6001 agtattgcct tggctttaaa catgatcaat ctagaaaaat actaaggtga attaggattc
     6061 tgatgcccga tacatcaagc cccacccagg gttcctctgc tgctgctgag cgtttggcaa
     6121 gtgcactgcg gcacttgaag aaagccatgc aatccagtcc tggcgttgtg ccggcccaag
     6181 atcttgatgc tcgggacagg tcggtgttgg tcgacgccgg ttttttgcgc cctgtcatga
     6241 aaggttggta cgtttgtagc gaccccagtg aaaatcctgg tgaccaccac ggtaagcctc
     6301 gccgttcagg gcggggacaa acggtcattc aggtcggttc tgttcttgaa tgtagcgctt
     6361 gagtacttca atcggagcct cgcctgtgct gctagcgaag tagctagggc tccatagcga
     6421 gttttttgat ttggccatgg
//
LOCUS       DATBNL010000659         1945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_97425, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000659 DATBNL010000000
VERSION     DATBNL010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97425"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1126)
                     /gene="yidC"
                     /locus_tag="VIC30_11210"
     CDS             complement(<1..1126)
                     /gene="yidC"
                     /locus_tag="VIC30_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008157528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEY7804985.1"
                     /translation="MDIRRTILLMIFAFSLLMLWNNWQVHQTGSSLFGETPSATQTDN
                     GSSGQTGSTPSANGAVPTAPSAPNTSVTASQGAQPSAPAPKPAPDETVTIETDVYRLT
                     FNLTGAQIIRAGLLKYPAMDDSSQPTVLLQQDGGRTYIVQSGVVGPAGTDYPTHLAPF
                     EMVSSDTVMQGDQLPVTFVSESGGVRVTKTFTFERGKYVVDVEHKVENLTDQPVTPSV
                     YLQITRDGDDPADTSSFYHTFTGPAVYSEQEKFQKVSFSDIADRDASFIKSADNGWFA
                     MIQHYSVSAWVPPEGNLRSYEMAQVGDNLYAARSIETVGDIAPGASSTLNTKLWVGPQ
                     DQDALEALAPGLDLVVDYGWLTIIAKPLFILMTWIHTFVGN"
     gene            complement(1182..1412)
                     /gene="yidD"
                     /locus_tag="VIC30_11215"
     CDS             complement(1182..1412)
                     /gene="yidD"
                     /locus_tag="VIC30_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007834832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEY7804986.1"
                     /translation="MSWLLIKLVKGYQFFLSPWVGSNCRFNPTCSNYAIEAIKQWGAV
                     KGCVLAIRRIGKCHPWCDGGNDPVPPNHKRNR"
BASE COUNT          490 a          457 c          514 g          484 t
ORIGIN      
        1 agttcccaac aaaagtgtgg atccatgtca taagaatgaa caagggtttg gcgatgattg
       61 tcaaccagcc ataatcgact accaaatcaa ggccaggagc caatgcttct agcgcatctt
      121 gatcttgggg gccaacccac agtttggtat taagcgtgga actcgcgcca ggtgcaatat
      181 cgccgacagt ttctatgctg cgagcggcat agaggttgtc gccaacttga gccatttcgt
      241 agcttcgtaa gttaccttcc ggcggtaccc atgcggacac agagtagtgc tgaatcatgg
      301 caaaccagcc gttatcggcc gatttgatga atgaagcatc tctatcggct atatctgaaa
      361 aagagacttt ttgaaatttc tcttgttctg aataaaccgc aggcccggta aaggtgtgat
      421 agaagctcga tgtatccgca ggatcatcgc catcacgggt gatttgaaga taaaccgagg
      481 gcgtgactgg ttgatcagtt aggttttcaa ctttgtgttc aacgtcgaca acgtatttgc
      541 cacgttcgaa cgtaaaggtt ttagtgaccc gcacaccacc agactcgctg acaaaagtta
      601 caggcagttg gtcgccctgc ataactgtgt cagaggacac catttcaaaa ggtgctaagt
      661 gtgttgggta gtcggtgcct gctggcccga ccactccact ttgaacaatg taagtccggc
      721 cgccgtcctg ttgcaaaaga acggtcggct gtgacgaatc gtccatggct ggatacttca
      781 acaacccagc gcgaatgatt tgtgcaccgg ttaggttgaa cgtcagacgg taaacatcag
      841 tttcaatcgt gaccgtttcg tcgggagctg gcttgggtgc aggcgcactc ggctgagcac
      901 cctgcgatgc tgtgactgag gtgttgggtg cactaggtgc tgttggaaca gcgccgttag
      961 ctgagggtgt tgaccctgtt tgcccggacg aaccgttgtc tgtttgcgtg gcggaaggtg
     1021 tctcaccgaa aagtgatgag cctgtctggt gtacctgcca gttgttccaa agcataagca
     1081 aagagaacgc gaaaatcatt agcaggatcg tgcgacggat atccattctg acctgattgt
     1141 taagtgttca agaaaacatc gcagtttagc cttaaaagac ttcagcggtt gcgtttatgg
     1201 tttggtggga cggggtcgtt accgccatcg caccaagggt ggcatttgcc gattcgtcta
     1261 atcgctaaca cacagccttt gacggctccc cattgtttaa tcgcttcaat ggcgtaattc
     1321 gagcaagtag gattaaaacg gcagttagac cccacccaag gactaagaaa aaattgatac
     1381 cccttaacca gtttgatcag taaccaactc atatgcgctg tcgtatcttt gtaagcaaac
     1441 tatctgcttc gagtctagca aggtgcttca aagagaacgt agcattggtt tttggggtgg
     1501 ctttgagtcg gaataggtag aggccggcag gcaactcgcg ttgcgtgagc ctaaatgact
     1561 cgcgcaggac gcgcttgatg cggtttctat caacagcgcg acgtaacaac cgttttggga
     1621 ctatgaaacc taacttaggc gctctagccg tgtcatctag cggcgaacac gcgcaccagt
     1681 gcaaagagaa gattttccct tgaacaatgg gtctattacg taatgccgct ttgaattcgc
     1741 tcggtgcggt catacgcagc gcgcgagaga atgaggtttc gtttgagacc aacaacacct
     1801 ccgcaaagac gatacgtagc aagcggaaac gcagggtccg gtactaaccc tgagatttac
     1861 ttgatggtgg tcggtttatt caatgcctat ctgagtcaat gtctgactca atgcctgact
     1921 aacaaaatga gcctagctca ggcac
//
LOCUS       DATBNL010000660         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167594, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000660 DATBNL010000000
VERSION     DATBNL010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167594"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1587)
                     /gene="dxs"
                     /locus_tag="VIC30_11220"
     CDS             complement(<1..>1587)
                     /gene="dxs"
                     /locus_tag="VIC30_11220"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEY7804987.1"
                     /translation="LANELRQFVLDSVSQTGGHLSSNLGTVELTIALHYIFSTPEDRI
                     IWDVGHQSYPHKILTGRREQMPGLRQYEGLSGFPKRSESPYDAFGTAHSSTSISAALG
                     MAVASRNAGVNRQHIAVIGDGAMSAGMAFEAMNNAGVTPDVNLLVILNDNDMSISPPV
                     GALNRYLARLLSGQFYATAKNMGKAVLQHMPPVLELARRFEEHAKGMIMPATLFEEFG
                     FNYVGPIDGHDLDALLPTLQNLRELGGLQFLHVVTKKGQGYKLAEADPVLYHGPGKFD
                     PEVGIQKSSKPAKPTFTQVFGTWLCDMAQADNRLVGITPAMREGSGLVEFEKRFAQRY
                     FDVGIAEQHAVTFAAGVACEGQKPVLAIYSTFLQRGYDQLIHDVALQNLDVTFALDRA
                     GLVGADGATHAGNYDIAFLRCVPNMVVATPSDENEARLLLTTCYQHPGPAAVRYPRGA
                     GAGVAIEETLSTVPIGQAVVRQQGQRIALLVFGTLLPAAAEVAQALGLTLVDMRFVKP
                     IDETQILELAKTHEAFVTIE"
BASE COUNT          376 a          463 c          417 g          331 t
ORIGIN      
        1 cctcaatggt gacaaaggcc tcgtgtgtct ttgccaactc aagaatctga gtctcatcaa
       61 tgggtttaac aaatcgcatg tccacgagcg tcagaccaag cgcttgagcg acctcggctg
      121 ctgccggcag cagcgtgcca aacaccaaca aggcgatgcg ctgcccctgt tgacgcacca
      181 cagcctgacc tattggcact gtgctgagcg tctcttcgat ggccacacca gcacccgcac
      241 cgcgcggata acgaactgcc gctgggccgg ggtgttgata acaggtcgtc aatagcaaac
      301 gggcttcgtt ttcatccgaa ggcgtggcca ccaccatgtt aggcacacag cgcaggaacg
      361 cgatgtcata gtttcccgcg tgcgttgcac cgtcggcacc cacaagccct gctctatcta
      421 gcgcaaaggt cacatcgaga ttttgtaggg ccacatcatg aatgagttgg tcgtaaccac
      481 gctgcaaaaa ggtggaataa atggccagaa caggcttttg accttcgcag gccacacccg
      541 cggcaaacgt caccgcatgt tgctcagcaa tccccacatc gaaataccgt tgggcaaacc
      601 gcttttcaaa ctcaaccaag ccactgcctt cgcgcatggc cggtgtgatg ccaaccaatc
      661 ggttatcggc ttgggccata tcacacagcc aggtgccaaa cacttgggta aacgttggct
      721 tagccggctt gctcgacttt tgaatgccta cctccgggtc aaacttgccc ggcccgtgat
      781 aaagcaccgg atcggcttct gcgagtttgt agccttgccc ctttttggtc actacatgca
      841 ggaactgcaa gccgcctagc tcgcgcaagt tctgtagcgt gggcagcagc gcatcaagat
      901 catggccgtc gataggtcca acatagttaa atccgaactc ttcaaacaac gtcgcgggca
      961 tgatcatgcc cttggcatgc tcttcaaaac gacgcgcaag ctccagcacc ggtggcatat
     1021 gttggagaac ggctttgccc atgtttttag ccgtagcgta gaactgtcct gatagtagcc
     1081 gcgccaaata acggttgagc gcgccgaccg gcggcgaaat cgacatgtcg ttgtcgttta
     1141 agatcacgag caaattcacg tctggagtca cgcccgcgtt gttcatggcc tcaaaggcca
     1201 taccagcgga catggcgcca tcaccaatga ctgcaatatg ctgtcggtta accccagcat
     1261 tgcgcgacgc cacagccatg ccgagggcag ccgaaatcga cgtcgatgag tgagccgttc
     1321 caaaggcgtc gtaaggggat tcgctgcgct tggggaaacc agacaaccct tcgtactgac
     1381 gcaacccggg catttgttcg cgacgacccg taaggatctt gtgcggatag gactggtgcc
     1441 cgacatccca aatgatccga tcttcaggtg tagagaatat gtaatgcagg gcaatggtca
     1501 actcaacagt gcccaagttc gaagacaggt gcccacccgt ttgcgagact gaatcaagca
     1561 cgaattggcg cagctcattg gctagtt
//
LOCUS       DATBNL010000661         1945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117241, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000661 DATBNL010000000
VERSION     DATBNL010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117241"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VIC30_11225"
     CDS             <1..234
                     /locus_tag="VIC30_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004202890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEY7804988.1"
                     /translation="MPTMAVGLITEAQQAENILQAGDADMIALARGMLYDPRWAWHAA
                     AELGATVDAPPQYWRCQPRELKHLFNSATTGQR"
     gene            complement(326..808)
                     /locus_tag="VIC30_11230"
     CDS             complement(326..808)
                     /locus_tag="VIC30_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HEY7804989.1"
                     /translation="MPSFDVVSEVDKHELTNAVDQANRELSNRFDFKGTDAKFELNDY
                     VVTLHAPSAFQLGQMRDILRARVSARSIDVRCLDAADPIENLGGARQTVTVQQGIDQP
                     TAKKLVAEIKAAKLKVDTQINGDKLRVTGKKRDDLQTAIALLKESKVERPLQFENFRD
                     "
     gene            955..1830
                     /locus_tag="VIC30_11235"
     CDS             955..1830
                     /locus_tag="VIC30_11235"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HEY7804990.1"
                     /translation="MPELTGTLTQLYTYPIKSCGGVAVSQALVMPTGLAFDRQWMIVD
                     DQGEFQTQRQIPHLVWIEPEVQEQAQSLTISAPEMPTLTLPLAAEDAPKQAVQVWADR
                     LDALDMGQAAAQWLDDYLQVPGKHFRLVQFDRNHTRLSDGLWCGAQPAPVQFDDGFAL
                     NVLSEASLRHFNERRMEMGDEPVDARRFRPNLVIDGLGTHEEDLLHTIEFKTNGASLL
                     LELVKPCPRCQIPDVNPDTAAREPEVSTLLARYRQMPAMDHAVCFAMNAVVRSQASVS
                     LHVQDTFEGTYRFEG"
BASE COUNT          450 a          540 c          497 g          458 t
ORIGIN      
        1 atgcccacca tggccgtggg gctcattacc gaggcacagc aagctgagaa catcttgcaa
       61 gcgggcgatg ccgatatgat tgcactggca cgtggcatgc tctacgaccc acgctgggcc
      121 tggcatgcgg ccgcagaact gggcgccacc gttgacgccc ccccacagta ctggcgttgt
      181 cagcctcgcg aactcaagca cctgtttaat agcgctacca ccggccagcg ttgatgactt
      241 gttggaaatg gctagttaga aataatctgt tagtaacttg atagagactt gccagttgga
      301 atcaactggc accgactggc atcgattagt ctctgaagtt ctcaaactgc aacggccgct
      361 cgactttgga ttcttttaac aaagcgatcg ccgtttgcag gtcatcacgc tttttaccgg
      421 tcacacgtag cttgtcgccg ttaatttgtg tatcaacttt gagcttggcc gctttgattt
      481 cagcgacaag cttcttggcg gtgggttgat caatgccttg ctgcaccgtt accgtctggc
      541 gagcaccacc aaggttctca atcgggtcag cggcatcgag gcatcgaaca tcaatgctgc
      601 gcgcactcac acgtgcgcgc aggatatccc gcatttgccc caactgaaag gcgctcggtg
      661 cgtgtagcgt gaccacgtaa tcatttaatt caaacttggc gtctgtgcct ttgaaatcaa
      721 accggttgga caattctcga ttggcttgat ccacagcatt ggtcagttcg tgcttatcga
      781 cctctgacac gacatcaaat gatggcatgg attcgactcc ttcctgcgtt taattaaaac
      841 taggacatag gctcaggcgc tgctcatagg ccccaaagct ctgcgtttaa gacacacaaa
      901 tcatgacgaa acgtataatc tgtgcaccat ggatgccttc acttttaaca cgatatgcct
      961 gaattgaccg gcaccttaac gcaactctat acctacccga tcaagtcctg tggcggcgtc
     1021 gctgtgtcac aagcgctcgt tatgcccacc ggactggcat ttgatcggca atggatgatt
     1081 gtggacgacc aaggcgagtt tcagacgcaa cgccaaattc cacatctggt ctggattgaa
     1141 cctgaagttc aggaacaagc acaaagcctc accatctcgg cacccgagat gcccacgcta
     1201 acactgccac tggccgctga agacgccccc aaacaagcag ttcaggtctg ggccgatcgc
     1261 cttgatgccc tggacatggg gcaggccgcg gcgcagtggc tagatgacta cttgcaggtg
     1321 ccaggcaaac actttcggct ggtgcagttt gatcgcaacc acacaagact gtcagatggg
     1381 ttgtggtgcg gcgcacaacc ggcacctgtg cagtttgacg atggctttgc attgaacgtt
     1441 ttatctgagg caagtctgcg gcatttcaat gagagacgca tggaaatggg tgatgagcca
     1501 gtcgatgccc gacgctttag acccaatcta gttattgatg gcctcggcac tcacgaagaa
     1561 gatctgctac acaccatcga gttcaagacc aatggcgcat cgctgctact ggagttggtc
     1621 aagccctgcc ctcgttgcca aatcccggac gtcaatcccg atactgccgc gcgcgaaccc
     1681 gaagtgtcga cactcttggc gcgttaccga cagatgccag ccatggacca cgcggtttgt
     1741 tttgcgatga acgccgtggt ccgatcgcag gcttcggtat cactgcatgt acaagataca
     1801 tttgaaggta cctaccgatt tgaaggctaa gccatgaatg cgacgcaccc aaacacagac
     1861 tggcgatcga tgcgatctat ccgcgccatc ttgttgctga ctgttttttt aattgccttg
     1921 gtgatagcgc ctaacgtcat ggccg
//
LOCUS       DATBNL010000662         3362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147667, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000662 DATBNL010000000
VERSION     DATBNL010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147667"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..1662)
                     /locus_tag="VIC30_11240"
     CDS             complement(274..1662)
                     /locus_tag="VIC30_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7804991.1"
                     /translation="MDPILIGEILSGLMFFGVIGMLMLGFPVAFTLAGTSLIFALIGY
                     QFGVFDFSNFSSLAGRYIGFMTNEVLVAVPLFIFMGVMLERSRIAEQLLMTMSKLFGN
                     LRGGLGISVIIVGALLAASTGVVGATVVTMGLISLPAMLRAGYDPKLASGVICASGTL
                     GQIVPPSTVLIFMADMLAGINAQVQMSQGNFAPDPVSVGDLFAGAFIPGLLLIGLYLL
                     WMIFKAIVDPKSCPATPFTAAERQSLVKEVFTALVPPLLLIVAVLGSILGGIATPTEA
                     ASVGAVGAMVLAAARFKLSWQVLKEAVVSTATITSMIFIIIFGASVFSIVFRQMGGED
                     LVHEFLTGLPGGAIGAMIVVMVIMFVLGFILDTFEIIFIVIPITAPILLALGLDPVWL
                     GVMVGVNLQTSFLTPPFGFSLFYLRGVAPPTVTTGQIYRGAIPFVCLQIVAIALLFIF
                     PEIVTWLPDLLY"
     gene            complement(1666..2235)
                     /locus_tag="VIC30_11245"
     CDS             complement(1666..2235)
                     /locus_tag="VIC30_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005674317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY7804992.1"
                     /translation="MVTSLAAFMRLVNSINKAVGKTFSWLALGIVLVCFWVVVERYVF
                     GSTQLWAQDLYVWLNGAMFTSVAAFALFRGDHVRVDIFYRPASMRFKAIADLIGVVVF
                     LLPFTIVVYLYGMPFVERSWRLLENSANVGGMPGFYVLKSFIIVFAVLVGLQGLAMAI
                     RSILVLQHREDLIPDDFKYSAYGDAVIKE"
     gene            complement(2332..3210)
                     /locus_tag="VIC30_11250"
     CDS             complement(2332..3210)
                     /locus_tag="VIC30_11250"
                     /inference="COORDINATES: protein motif:HMM:NF039714.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6279 family lipoprotein"
                     /protein_id="HEY7804993.1"
                     /translation="MIGQWFPSGLRRFTAISVIALLGGCTSVQLGYNYAPALLQYQMD
                     SYLDLNDEQEALLSQELKQFQAWHREGELPVYAQTLRQWAAKLEQPYTFTTDELLSKH
                     AELEGMLLKAGEQSAFHLAPLILTLTDRQRAQLRAEFDESNAEYAEEFLADGEQAQRD
                     RLERFEERYEEWLGPLTEAQTKRLRQWLAEQPSRAAQWGEQRIVRQQALLKLLADAQT
                     HLSAEAAARDLHNYFQSLSRYRVADVQPELGGWLGTLATFTTSMLNDMTDKQRNHLRE
                     RLLEYAKDFEALSGSS"
BASE COUNT          878 a          897 c          922 g          665 t
ORIGIN      
        1 agaagacgct tgacagcttc gttaagggtt tgaacatcgt caaaatcaag accgacggca
       61 ccgacgctca gtatgtagcg gcccgttcca agtacttcaa gatgtgagca acaaccgcaa
      121 gggtttggca tctgtcggac ccgagcgcac aaacagaaaa gccccgcgtc agcggggctt
      181 ttctgttttg gggtttcagt ctcaaccccg agccttgggc gtttgtgtat tcagcccagt
      241 ccccaaggcg gggtggttcc aagaaaccaa gcatcaatac agcaagtctg gcagccaggt
      301 aacaatctcc gggaagataa atagcaaggc gatggccacg atttgcaggc acacaaacgg
      361 tatggcacct cgatagattt gccctgtggt aacggttggc ggcgccaccc ctcgcaaata
      421 gaacagcgag aacccaaatg gtggcgtgag gaaactggtt tgcaagttca cgccaaccat
      481 gacaccgagc cagactgggt cgagcccgag tgcgagcagg atgggtgcgg tgattgggat
      541 cacgataaag atgatctcga aggtgtcaag gataaagcca agcacgaaca tgatgaccat
      601 caccacgatc atcgcaccaa tggcaccgcc aggcagcccc gtcaggaact cgtgcaccaa
      661 gtcttcgcca cccatttgac gaaacacaat cgagaacacc gacgcaccaa agatgatgat
      721 aaaaatcatc gatgtaatgg tggctgttga taccacggcc tctttaagaa cctgccacga
      781 gagcttaaag cgagcagcag ccaagaccat tgcacccaca gcacccacag atgccgcttc
      841 ggtcggtgtg gcgataccgc caagaatgga gccgagcacc gccacaatca acagcagcgg
      901 tggcacaagt gccgtaaaaa cttctttaac caacgattgg cgttcagccg cagtgaaggg
      961 cgtggctgga caggacttgg gatccacaat ggctttgaag atcatccaca gcagatacag
     1021 gccgatcagt aataggcccg gtataaatgc cccggcaaaa agatcgccaa ccgacacggg
     1081 gtcgggggcg aagttgccct gtgacatttg cacctgtgcg ttgatcccag cgagcatgtc
     1141 ggccataaaa atcaagacgg tcgaaggcgg gacgatttga cctagggtgc cagacgcaca
     1201 aatcacaccg gaggccagtt tcgggtcata accggcgcgc aacatcgcag gcagtgaaat
     1261 cagacccatg gtcacgaccg tggcaccaac cacgccagtc gatgcggcaa gcagcgcacc
     1321 gacgatgatg accgatatgc ccagcccacc gcgcaagttg ccaaagagct tgctcatggt
     1381 catgagtagt tgctcggcga tacgcgagcg ctcgagcatg acgcccatga agataaacaa
     1441 gggcacggca accagcactt cgttggtcat gaagccgatg tatcggccag ctagcgatga
     1501 gaagttgctg aaatcgaata caccgaactg ataaccgatc agcgcaaaga tgagcgaggt
     1561 gccagcaagc gtgaacgcca ccgggaaacc cagcatcagc atgccgataa ccccaaagaa
     1621 catcaagccg gagaggattt ctccgatcag tatgggatcc atgggttatt ccttgatgac
     1681 agcgtcgccg tacgcgctgt acttaaagtc gtcagggatg aggtcttcgc ggtgttgcaa
     1741 caccaggatt gagcgaatcg ccatggccag cccttgcaaa ccaacaagca ctgcaaacac
     1801 aatgatgaag ctcttgagca cataaaagcc aggcataccg ccgacgtttg ccgagttctc
     1861 cagcagccgc caggatcgct ctacaaatgg catgccatag aggtagacca caatcgtaaa
     1921 gggcaacaaa aacaccacca caccgatcaa gtcagcaatg gctttaaatc gcatagaggc
     1981 tggccggtaa aaaatatcga cccgcacgtg gtcgccacga aacagcgcaa aggcggccac
     2041 ggacgtaaac atcgcgccgt tgagccagac gtagaggtct tgcgcccata gttgcgtgct
     2101 gccaaagaca tagcgttcaa ccaccaccca gaagcagacc agcacaatgc ctagggccag
     2161 ccaggaaaat gttttaccaa cagctttgtt aatgctgttg accagacgca tgaaggcggc
     2221 aagggaagtg accatagtgg tgactagtta gagataagag ccgggattct aacgcatact
     2281 taaaaacaac cgttctcaaa taagcaagat agtgacctta gggctgtcac attatgacga
     2341 cccggacaaa gcctcaaagt ctttggcgta ttcgagcagg cgttcgcgca aatggttgcg
     2401 ttgcttgtcg gtcatgtcgt tgagcatgct cgtggtaaat gtggccaatg tgcccaacca
     2461 gccgccgagc tctggctgta cgtcagcgac ccggtagcgt gagaggcttt ggaagtaatt
     2521 gtgtaggtct cgggcggcgg cttcggcaga caagtgcgtc tgggcatcgg ctaataactt
     2581 aagtaatgcc tgttgacgca cgatacgttg ctcaccccat tgcgcggctc gacttggctg
     2641 ttcagctagc cactgtctaa ggcgcttggt ttgtgcctct gttagggggc caagccactc
     2701 ttcatagcgt tcttcgaatc gctcaagccg gtctcgttgc gcttgttcgc catcggcgag
     2761 gaactcctcg gcgtactcag cgttgctttc atcgaactct gcgcgcagct gggcgcgttg
     2821 gcgatcggtc agtgtgagta tgagcggtgc caaatgaaat gccgattgtt caccggcttt
     2881 gagcaacatg ccctctagtt ctgcgtgttt ggacagtaac tcgtccgtgg tgaaggtgta
     2941 gggttgctcg agcttagccg cccattgccg cagcgtttgt gcgtagacgg gaagctcgcc
     3001 ctcacgatgc caggcttgga actgcttaag ctcttgcgac aacaacgctt cttgctcgtc
     3061 attaagatcg aggtagctgt ccatctggta ctgcaaaagt gctggcgcat agttgtaccc
     3121 gagttgcaca gacgtacaac cgccaagtaa agcgatcacg ctaattgcag tgaagcggcg
     3181 caacccagat ggaaaccatt ggccgatcat gtcaagtgag cctgcaaaag gaacgtttgg
     3241 taaaaaagca ttgcttaact ttgtgttgat gggtggcttt ggtcatagct ctcagtgtac
     3301 gtaacttgtc agtggcatgg tcagttgcac ctgcgttaga cgtgggtaac cagccccatc
     3361 ac
//
LOCUS       DATBNL010000663         2101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87906, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000663 DATBNL010000000
VERSION     DATBNL010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87906"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VIC30_11255"
     CDS             <1..608
                     /locus_tag="VIC30_11255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019428957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY7804994.1"
                     /translation="MTKAKRQTTFDLIVLDVMMPGEDGMSICRRLRAGGDDIPIIMLT
                     ARTEDASRIMGLDLGCDDYLTKPFNPRELLARIKAVLRRGRARQELPGAPSREPEMIR
                     FGPYELNLTRRTLSCDDQPLSITTAEFAMLKVFARHPNEPLSRDRLMELARGREYEAF
                     DRSLDVQISRLRKLIEPNPSKPTYIQTVWGVGYVFVPNGSA"
     gene            595..1959
                     /locus_tag="VIC30_11260"
     CDS             595..1959
                     /locus_tag="VIC30_11260"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7804995.1"
                     /translation="MAAPELKLGLFARTFLLLALLMVASLAAWVHVFWTLERQPQVEQ
                     IANQIVRAVELTEIAHKHSAPGQTALLVNDINVGSDFTLLATDQPFGLSPLPDQLEWQ
                     SVASLVRLKLGADTELGLSTDTTDEVWVRAPQGKWLGVPVTPIGLTSGPEWVSWIAAA
                     ALLSMVGAAVAVGYLNRPLARLARVAQQLSRGQTPDRLPETGAQEIQQLNSSFNRMVS
                     QLQQADADRNLMLAGISHDLRTPLARMRLEIEMSPMTGEQRQAIDADLSQIDRTIGQL
                     LQYARPGNEPPDKAINLLDIITDVVRQTQTSAISPNQINLVAKKSAACRIDADDFRRC
                     LANLIENAQRYGVGPDGHYALTVKLQSHGERIYVDVCDQGPGIAQDDIERVLRPFSRG
                     ETARTGSAGAGLGLSIVQRLLARADGNLVLMSAQPTGLIARMALHRARSRRRAQAQKD
                     GSNG"
     gene            complement(1956..>2101)
                     /locus_tag="VIC30_11265"
     CDS             complement(1956..>2101)
                     /locus_tag="VIC30_11265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEY7804996.1"
                     /translation="VGNIAEDLGLPVDAINIKGKTNEGLGYLGRREGIAVTTVALVAR
                     ITV"
BASE COUNT          477 a          615 c          557 g          452 t
ORIGIN      
        1 tcatgacaaa agccaagcgt caaaccacgt tcgacctcat cgtgcttgat gtcatgatgc
       61 cgggtgaaga cggcatgagc atctgtcgtc gactgcgggc gggcggcgat gacatcccca
      121 tcatcatgtt gaccgcccga acagaggatg cgagtcgcat tatgggttta gatctcggtt
      181 gcgatgatta cctcaccaaa ccttttaatc cgcgtgagtt acttgcgcgt attaaagcgg
      241 tgcttagacg cggacgtgcc cggcaagagt tgccaggtgc gccaagccgc gaaccagaga
      301 tgattcggtt tggcccatat gaactgaacc tcacgcgtcg caccctgtcg tgtgacgacc
      361 aaccgctttc cattaccacc gcggaattcg ccatgttgaa ggtatttgcg cgccatccaa
      421 acgagccatt atctcgagac agactcatgg agcttgcacg cggtcgcgag tatgaggcct
      481 ttgaccgcag tctcgatgtg caaatctctc gcctcagaaa gctgatcgaa cccaacccgt
      541 ctaaaccgac gtacatccag acagtctggg gtgtgggcta cgtatttgta cccaatggca
      601 gcgcctgagc tcaaactcgg gctttttgcc cgcacctttt tattacttgc cctactcatg
      661 gtggcaagcc tagccgcctg ggttcatgtg ttctggacgc tagagcgcca accgcaagtc
      721 gaacaaattg ctaaccaaat tgtgcgtgcc gttgagctca ccgaaattgc tcacaaacac
      781 tcagcacccg gccaaacggc cctgcttgtc aatgacatca acgtggggag tgactttacg
      841 ctactggcga ctgatcagcc ctttggtttg tcacccctgc ctgatcagct ggaatggcag
      901 tctgtcgcat cgctggtgcg actaaagctt ggcgcagata ccgaactagg cttaagcacc
      961 gacaccaccg atgaggtttg ggtccgtgca ccgcaaggca agtggctagg tgttcccgtc
     1021 acacccatcg gcttaaccag cggcccagag tgggtgagct ggattgccgc ggctgcatta
     1081 ctttccatgg taggtgccgc agtcgcggtt ggctatctga atcggccgtt ggcgcgcctg
     1141 gcacgggtgg ctcaacaatt gtcacgcggg cagacaccag accgactgcc cgagaccggc
     1201 gcccaagaaa tccagcaatt gaacagtagc tttaatcgta tggtcagtca gttgcaacaa
     1261 gccgatgcag atcgcaactt aatgctggca ggtatctcgc atgacctgcg cacgccactg
     1321 gcgcgcatgc gactagaaat tgagatgagt ccgatgactg gcgagcaacg acaagccatt
     1381 gatgctgacc tgtcacagat tgatcgcacc atcgggcaat tgctgcagta tgctcgacca
     1441 ggcaacgaac cgccggacaa agccatcaat ctgctcgata tcatcactga tgtggtgcgc
     1501 cagactcaaa catcggccat ctcgcctaac caaatcaact tggtcgcaaa aaaatccgct
     1561 gcctgccgca ttgatgccga tgatttccgg cggtgcttgg ccaacttaat tgagaacgcc
     1621 caacgctatg gcgttggccc cgatggtcac tacgccctca cagtcaaact ccaaagccac
     1681 ggcgagcgca tctatgtcga cgtctgtgat caaggccctg gcattgccca agacgatatt
     1741 gagcgggtgc tcagaccatt ctctaggggt gagacggcca gaactggcag tgccggtgcg
     1801 gggctcggtt tatcgatcgt gcaacgactg ttggcacgcg ctgacggcaa cctggtactc
     1861 atgtctgctc agcccaccgg tttgattgcc cgcatggccc tacatcgggc cagatctcgc
     1921 cgcagagctc aagctcagaa agatgggtca aacggttaaa ccgtgatgcg tgccacaagt
     1981 gccacggtgg tcacggcaat cccctcgcga cgacccaagt aacccaatcc ctcgttggtt
     2041 ttacctttga tgttgatggc atctactggc aagcccaaat cctcggcgat atttcccacc
     2101 a
//
LOCUS       DATBNL010000664         3345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57682, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000664 DATBNL010000000
VERSION     DATBNL010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57682"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VIC30_11270"
     CDS             complement(<1..419)
                     /locus_tag="VIC30_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011616346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7804997.1"
                     /translation="MTATSPPDAQTGSLHGIKVIDLSRVLGGPYAGQILADHGADVLK
                     VEPPQGDETRNWGPPFEKGVASYFRGVNRNKRGIRLDLSQSEDRQTLLNLLADADVVL
                     ENFKTGTLEKWNLGYETLKEKFPRLIHCRVSGYGADG"
     gene            complement(423..2216)
                     /locus_tag="VIC30_11275"
     CDS             complement(423..2216)
                     /locus_tag="VIC30_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019573106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7804998.1"
                     /translation="MNAPDFNPLMRAAKEHPVADRHGANAYLEDTEFARLLAVYLPSD
                     LLAHIKPHLLRLGELAGGRLDELAQSADKHPPQLEHRTRTGRDQQRIVKHPDYVEMER
                     LAFSEFGLAAMSHRAGVLGWDKPMPATVKYALSYLFVQAEFGLCCPLSMTDSLTRTLR
                     KFGDPALVARCIDNLTTQDLDALTQGAMFMTEQGAGSDVSATETLARPEDNENTKWRL
                     YGDKWFCSNPDAALAMVLARTEGAPAGMKGVSLFLLPRTLPDGSPNHYRIIRLKDKLG
                     TRSMASGEIRLEGAQAWLVGELGRGFAQMADMVNNSRLSNGMRAAGLMRRAVAEALYT
                     SRHRTAFGRHLIDMPLMQRQLAKLMVPAEQARTMMFQTAAALGRSDAGEPGAYALTRL
                     LTPLIKFRACRDARKVTADAMEVRGGCGYIEEWSDPRLVRDAHLGSIWEGTSNIVALD
                     VLRAIVREDALPVWQSHVTELLSNAPWHSEVKQKLEELVERACALADRTAREKNEVMA
                     RELASVLYNLTTVIAMGWEAGQTGSTQRMLLAQLALKHRLLPRDRLAEPKDIDLSALF
                     IDSTDTSEPSGASESSKPTHWQDIQALNILD"
     gene            2365..3246
                     /locus_tag="VIC30_11280"
     CDS             2365..3246
                     /locus_tag="VIC30_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019573107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7804999.1"
                     /translation="MAIEFRHLKYFVVLAEELHFGRAAKRLHISQPPLSFNIKQLEES
                     LGVQLLIRSSKGVRLTPAGHAFRQSAIGLLAHAEAASTEAREVAAGVTSRVRIGFVGS
                     MLYRGLSERLQRFQSEYPKVQLVLTEANSNEQLDALAKGELDVGFVHTDRISGDLEHC
                     LYMSEPFVLCLPSAHPAAAVQDMDNELMASTPLVLFSRGVSPDYYERVIAACAGLGWK
                     PLVRHEVRHWLSVLALVRKGMGAALVPAALTDSGMTGLVFKELPPLPVVSDVHLVWRV
                     KSVPEPLLACLRADQQA"
BASE COUNT          733 a          889 c          940 g          783 t
ORIGIN      
        1 tgtccatcgg cgccatagcc actcacacga caatgaatca agcgtggaaa tttctctttc
       61 agggtctcat aacccagatt ccatttctca agcgtgccgg ttttaaagtt ctccaataca
      121 acatcggcat cggcgagcag attcagtaag gtctgtcgat cctcgctctg actcaggtca
      181 agacggatgc cacgcttgtt tcggttcaca cccctgaagt aagaggcaac ccctttttca
      241 aaggggggac cccagttacg ggtctcgtca ccttgaggcg gttcgacctt cagtacatcg
      301 gcaccgtgat cggccaagat ctggccagcg taaggaccgc caagaacgcg tgacaggtca
      361 atgaccttga tgccgtgtag tgagccggtt tgtgcatcag gtggagaagt tgcagtcatg
      421 gattaatcca atatattcag ggcttgtatg tcttgccagt gggttggttt gcttgattcg
      481 cttgctccac tgggctcgct tgtatcagtc gagtcgataa acagagcact caagtcaatg
      541 tctttaggtt cagcaagccg atcacggggc aacaaacgat gcttaagtgc cagttgtgcc
      601 agcagcatgc gttgagttga gccagtttgg cctgcctccc agcccatggc aatcacggtt
      661 gtcaggttgt atagcacaga ggcgagctcg cgcgccatga cttcattttt ttcacgtgcc
      721 gtgcggtcag ctagcgcgca ggctcgctct acaagttcct cgagtttttg cttaacctcc
      781 gaatgccagg gcgcgttcga caaaagctcg gtgacgtgtg actgccagac gggtagggca
      841 tcttcgcgca caatggcgcg caagacatcc aaggccacga tgttgcttgt gccttcccaa
      901 atggatccga gatgcgcgtc acgcacaagg cgcgggtcgc tccactcttc aatataccca
      961 cacccaccgc gcacctccat cgcgtcggcc gtgactttgc gggcatctcg acaagcacga
     1021 aacttaatta gcggtgtgag caatcgggtc agtgcgtagg cgcctggttc acccgcgtca
     1081 ctgcgaccaa gtgcggctgc cgtttgaaac atcatggtgc gtgcttgttc agcaggcacc
     1141 atgagcttgg ccaattgccg ttgcattaac ggcatgtcga taagatgcct gccaaaggct
     1201 gtgcgatgcc tgctcgtgta aagtgcctcg gccactgctc gacgcataag gccagccgca
     1261 cgcatgccat tcgataagcg cgagttgttc accatatcag ccatctgcgc aaagccgcgt
     1321 ccaagttcgc cgaccaacca agcttgcgcg ccttctaggc ggatctcgcc acttgccatc
     1381 gaacgagtac cgagtttgtc tttgagacga atgatgcggt aatggttggg cgaaccgtca
     1441 ggcagcgttc ggggaagcag aaatagcgat acgcctttca tgccggctgg cgcaccctcg
     1501 gttcttgcca gaaccatggc cagtgcagca tcgggattgg agcagaacca tttgtcgcca
     1561 taaagacgcc acttcgtgtt ctcgttatcc tcggggcgag caagcgtttc tgtggccgag
     1621 acatcagagc ctgcgccttg ctcggtcatg aacatggcgc cttgcgttaa ggcatccaag
     1681 tcttgagtgg tcaggttgtc tatgcaacgt gccaccaagg ccgggtcacc aaatttgcgc
     1741 agggttcgcg tgagcgaatc ggtcattgat agcggacaac aaaggccgaa ttcagcttgt
     1801 acgaacaagt aactaagtgc gtacttcacg gttgccggca tgggtttgtc ccagcccaag
     1861 acgccggcgc ggtgagacat agccgcaagc ccaaattcgc taaaagccaa gcgctccatt
     1921 tcgacatagt cggggtgttt gacgatgcgc tgttggtcgc gaccggtgcg cgtgcgatgc
     1981 tcaagttgtg gtggatgttt atctgcgctt tgcgccagct catcaagccg accgccagct
     2041 aactcaccca accgtaataa gtgcggtttg atgtgtgcca gtagatcgct aggcaagtag
     2101 acagccaaaa gccgggcaaa ctcggtatct tcaagataag cgttcgcgcc atggcggtcg
     2161 gcaacgggat gttccttggc cgcgcgcatt aacggattga aatcaggtgc gttcataaat
     2221 ccccctatga tcattgcgac ggctcgatgt acttggcatg aatcgacggt ttctggtgac
     2281 gactgtcgac gaatcgatcg atggtcacgc gaaagacatt gttttgtcta atattgattt
     2341 ttgaactttc aatacaagaa ttgtatggcc atcgaattca ggcatctcaa gtacttcgtg
     2401 gttttagccg aggaactgca tttcggtcgg gcagccaagc gcctgcatat ctcgcaacca
     2461 ccactgagct ttaatatcaa acaactcgaa gagtcgttgg gcgtgcagtt gctcatccgc
     2521 agcagcaagg gcgtacggct aacgccagca ggtcatgcat tcaggcagtc agccataggg
     2581 ttgctcgctc atgcagaagc ggcgagcact gaggcgcgcg aggtggccgc tggcgtcacc
     2641 agccgtgttc ggattggctt tgtcggttca atgctgtatc gcggattgtc cgaacggctg
     2701 cagcggtttc agtccgagta tccgaaggtg cagctagtgc taactgaagc aaactccaat
     2761 gaacaactcg acgcactggc caaaggtgag cttgacgtgg gctttgtgca caccgaccgg
     2821 atctctggtg acctcgagca ctgtttgtat atgtccgagc ctttcgtgct gtgtctgcca
     2881 agtgcgcatc cggcggcagc ggttcaggat atggacaatg agttgatggc atcaacaccg
     2941 ttggtgttgt tctcgcgagg cgtgtcacca gactattacg aacgcgtcat cgctgcctgt
     3001 gcagggctcg gatggaaacc gctggttcga catgaagtgc gtcattggtt aagcgttctc
     3061 gcgttggtgc gcaagggcat gggtgcggcc ttggtaccag cggctttgac tgatagcggc
     3121 atgacgggtt tggtgtttaa agaactgccg ccactgccgg tggtgtccga tgtacatctg
     3181 gtttggcgcg ttaaatccgt gcctgaacca ctgttggcgt gcttgcgtgc ggaccaacaa
     3241 gcatgacacc tgcacacacc tgtgcctggt atttcgagac aaagcatgaa caaacaaaaa
     3301 caagtaaaga atggttaaaa cccagcggta tttctgcgac tggtt
//
LOCUS       DATBNL010000665         3125 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_147704, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000665 DATBNL010000000
VERSION     DATBNL010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3125
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147704"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1638
                     /locus_tag="VIC30_11285"
     CDS             178..1638
                     /locus_tag="VIC30_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019559871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805000.1"
                     /translation="MQISREELISILAQFNPWWRGEPIADLPTWRRAAYRELFQWLTA
                     PPAPRAILLSGARQVGKTTLVLQAIDGLLHQGVAPGNILYATFDHPVLKLAGIEAVLQ
                     AWREREPQADGPEYLLLDEAQFIRDWGTWVKHQVDFKKHRRIAFTGSAMPLIQSDQES
                     GVGRWHTISLTTLSFYEYLQIKNLSLPPLPRVGSLRNLFDWTPPDFYRVIEVAQPYIS
                     HFHEYLLRGGFPQTAQVESITQAQRLLREDIIDKVLKRDMTALFGVRRILDLEHTFLY
                     LCMHDGGILDMADLCRNLEVKRPTAQNFIELLQTTHLIYRLPPFGYGKDVLRARFKIY
                     LSDAAIAPAVMLKGKSMLEDPAALGVATETAVLKHLYARYYAQSVRFSYWRGKRDHEV
                     DLVAEVGGQIIPFEVKYRSQHTGLRELKGLLELCQQKSIGRAYVVTKSLDDFGVINRL
                     ARTADTAGSTATPQLMRIPAPLLCYWMGQAEQSDAI"
     gene            complement(2262..2340)
                     /locus_tag="VIC30_11290"
     tRNA            complement(2262..2340)
                     /locus_tag="VIC30_11290"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2302..2304),aa:Ile,seq:cat)
     gene            2712..2972
                     /locus_tag="VIC30_11295"
     CDS             2712..2972
                     /locus_tag="VIC30_11295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805001.1"
                     /translation="MLAIRLPEDIATELLPISAIRLFSAHRAASEYLRRHLAQPSRGL
                     GDEMAVPLILGNELSDVGKRLAREDPKVPIFAGFGVVCSGVG"
BASE COUNT          787 a          849 c          758 g          731 t
ORIGIN      
        1 tttctaacta ctgataaatc tttatcttga tcgcctcgcc aaaagagcaa ggccacgggt
       61 aaggggtgtt tcgagccgca ttcaaacccc aaaataagac aattcgcgta gaaacctccg
      121 taaaatctaa ttttagttaa tgtatactta tactaaattg tatatttagt gaactttatg
      181 caaatttcta gagaagaact catttcaatc ctcgcccaat tcaatccttg gtggcggggc
      241 gagccaatcg cagaccttcc gacttggcgc cgggcagcct atcgcgagct cttccagtgg
      301 ctgacggctc cacccgcgcc gcgcgcgatc ctattatccg gtgcccggca agtcggtaaa
      361 acgacgctag tacttcaggc tatcgacggt ttgctgcacc aaggtgttgc accaggcaat
      421 atcctgtacg ccacctttga tcatcccgtc ttaaagctag ctggcattga agccgttttg
      481 caagcctggc gagaacgtga accacaggca gacggccccg aatatctgtt gctggacgaa
      541 gcccagttca tacgcgactg gggtacatgg gtgaaacatc aggtcgattt taaaaagcac
      601 agacgtattg cttttacagg ctcggcgatg ccactgattc aatcagacca agagtccggg
      661 gttggacgtt ggcacaccat cagtctaact accctgtctt tctatgagta cctgcaaatc
      721 aaaaatttgt ctctgccgcc cttgccccgt gtaggatcac tgcgcaattt gtttgactgg
      781 acaccgccag atttttatcg ggtgatcgag gtggctcagc cctacatcag ccatttccac
      841 gagtaccttt tgcgtggtgg atttccacaa accgcccaag tagaaagcat cacgcaggct
      901 cagcgactat tgcgtgaaga cattattgac aaggtattaa agcgcgacat gactgccctg
      961 tttggcgtca ggcgtatcct cgaccttgag cacacgtttc tatacctttg catgcatgat
     1021 ggcggtatct tggatatggc tgatctttgc agaaatcttg aagtgaaacg tccaaccgca
     1081 caaaacttca tcgaactgct acagaccacc catctcattt accggttacc accatttggt
     1141 tatggcaaag acgttcttcg ggcacgcttc aaaatctatc tcagcgatgc agccatcgca
     1201 ccggccgtga tgctaaaggg caagtccatg ctcgaagacc cagccgcctt gggtgtggcg
     1261 acagagactg cggtgttaaa gcacctatat gctcgctact acgctcaaag cgtgcggttt
     1321 tcctattggc gcggcaaacg agatcatgaa gtcgacctcg ttgccgaggt tggcggacaa
     1381 atcattccgt ttgaagtcaa gtatcgctcc caacacactg gcctgcgcga attaaaggga
     1441 ctgcttgaac tttgccaaca aaagtcgatt ggtcgcgcct atgtcgtcac caagtcgctc
     1501 gatgatttcg gggtgattaa tcgacttgca cgcacggctg acaccgcagg aagtaccgct
     1561 accccacaac tcatgcgtat cccggcgcca ctactgtgct attggatggg tcaagcagag
     1621 cagagtgacg ccatatgaca tcgcaagcag gaaatgacga gagccggcac catcaatgtt
     1681 tgtgaggttg tgcgctcaaa tctgaaaggt ctgaaaggtc ttgcgtcttc attcacaaaa
     1741 gcccaactac caacccaact agcgggagaa agcacaacgg gaaagacgtc ggcacagttt
     1801 ttttacgcac gaaaccagat caccggcccg cacattgaaa acatgccctt agaagcccct
     1861 ttagacagtc acacgggtgc gacgacctga atgtctagtc gtttttcggg tcgaaggctg
     1921 cacacccaaa tgtccgataa ccacgggagg gagattagga aactgcgcaa ctagatttaa
     1981 ctgtccaccc atagactcta cgtagtggcg caatatcgac agcaacatgt cgcttcgttt
     2041 ttccagcctg gagcttgtaa cagatcgtat cctgacccac gcccaatgta gcggccattt
     2101 gcgcttgagt ctgttgagcc gcctctcgca aatcttttag cgttgccagt tccagcgcac
     2161 gatcttcaat gcgttgacgc cgctcccttg gtaatgccgc tatcacatca tcgagttttc
     2221 ttgggtaaga gcccatgtct cgagtatgta cctttataaa atggtggccc ccccgtgagt
     2281 cgaacacggc accaacggat tatgagtccg ctgctctaac caagcatgag ctagagggcc
     2341 acgagacaaa gataaatagc ttaaccgact tcgaattaac acaccgccgg ttgcgcagac
     2401 ccattggcga gcattggagt agacacaatc atcaaagcgc gcgacgattt ttgccgccta
     2461 atgtgaattt ttcagggaca accaattaca gtgacatact cattgcgtgc ccgcacaccg
     2521 gatctcgaca tcaagcgcta gccggtggtc tgaccctagg cgaggaaatc gcaaaccgcg
     2581 ccgcgcgcgc atcacaagcg atcacgaacc gttcccttgc aaacactgat gatagatgaa
     2641 catttcgaca ccttgactgg cacaccactc tcaaattgct atgcttgtac ggcaatttac
     2701 ggaggttacg catgctcgca attcgattgc cagaggacat tgccaccgag cttcttccaa
     2761 tatcggctat acgcctgttt tcagcgcacc gcgccgcttc ggagtacctg agacggcacc
     2821 tcgcgcaacc atcacgtggc ctcggtgatg aaatggctgt accgctgatc ctgggtaacg
     2881 aactatccga cgttggcaag cgacttgcgc gcgaagaccc gaaagtaccg atcttcgctg
     2941 gctttggcgt tgtctgctcc ggcgttgggt agaggcgaaa gcgaaaaccg gattgcatgc
     3001 gcgaggtgtg gcacgctttg tattaggcta cacatcgttt ttgtgacgaa atatcggcgc
     3061 ccggcgttaa acgaagagat aagcgcagac ttaaagcaag ccttagaaca tattatcgcc
     3121 cagtg
//
LOCUS       DATBNL010000666         1829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_157591, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000666 DATBNL010000000
VERSION     DATBNL010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157591"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /locus_tag="VIC30_11300"
     CDS             <1..570
                     /locus_tag="VIC30_11300"
                     /inference="COORDINATES: protein motif:HMM:NF023227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEY7805002.1"
                     /translation="WPLPVSKVNGIGPKATAKLNGLGIQTIGELAQVPVKDLQVHFGV
                     HYGHWLHQASHGRDDRPLETSRQPKSLSRETTFERNLHVRHDRSELTEIVNALCRRVS
                     EDLQRKSLTCRTVGLKVKFSDFSVVTRDVSVSYPVQSADQLRQVLADCLRRVHWHDRI
                     RLLGVRASGLHNRDAEVSMSSQLEFWLNP"
     gene            1019..1195
                     /locus_tag="VIC30_11305"
     CDS             1019..1195
                     /locus_tag="VIC30_11305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805003.1"
                     /translation="MSSSKPEAPQMQIDGASNGVPTEGVRVALLTAGPSGGPAGGAER
                     HFQGLHDGLVAIGC"
     gene            1292..>1829
                     /locus_tag="VIC30_11310"
     CDS             1292..>1829
                     /locus_tag="VIC30_11310"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY7805004.1"
                     /translation="MVISTKAPTYAIKHPAHVLHLVHTVRVFDDMFETAFPVPNAELW
                     QQRATIHALEFEPLSQVKARFANGKESSDRLYRWRGMHAQVLHPPLLKNNFEQGPTGD
                     YFFLPGRLHSWKRVDLIIEAVLGSSYPFKLKIAGTGDDLDRLQKIADNDPRIEFLGRI
                     SDEEVITLYANALAVPFTP"
BASE COUNT          401 a          466 c          506 g          456 t
ORIGIN      
        1 tggcctttac ctgttagcaa ggtcaacggt attggtccca aagccaccgc gaaattaaat
       61 gggctgggca tacagacgat tggtgaactg gcgcaagtgc cggttaaaga cttacaagtc
      121 cactttggtg tccattacgg gcactggctg catcaagcgt ctcatggacg agatgaccga
      181 cccttggaaa ccagccgtca gcccaagtct ttgagcagag agactacctt cgagcgcaac
      241 ttgcatgtgc gccacgaccg ctcggaactg accgagattg tcaatgcctt gtgtcgacgg
      301 gtgtctgagg acttacagcg aaagtcattg acttgtcgaa ccgtgggctt gaaggtcaaa
      361 ttctcggact tttctgtggt gactcgagac gttagcgtct catatcctgt gcagtcagca
      421 gaccaacttc gtcaggtgct tgcagactgc ctaaggcgcg tgcattggca tgaccgcatc
      481 cgattgctcg gggttagggc tagtgggttg cataaccgag acgcggaggt gtccatgtcc
      541 tcgcagttgg agttttggct caacccctaa tctcgcctta tgtcttgtgt cacattctta
      601 tcattttttt aacggatgta tactacttgg tgctttgacg gcctcgacaa agctgtcgga
      661 tgtatcttgt tgtcttcatg cttttgtctg aggatagctt gagcgcaact cggaacgcat
      721 tattactcaa ggttttttgt gagcaaaata gttaagatta ttagggaccc gctcccccac
      781 gcgatgcgct acgtggcgcg gcgtccccac ctaaaacggt ggttgagacc tttatttgct
      841 cgcattcctt ttctgtacaa caggttggtt cagtggcggg ctaggcaaat aaagggtgac
      901 tttccggcaa tccggtatga ctcacccaat gatccgtaca ttcagcaggc tgcccgcgga
      961 tgccacctgc acgcatcccc ccgaaagacg gttgacgagg tattgcaagc cataagagat
     1021 gagctcgagc aaacccgagg cgcctcagat gcaaattgac ggtgcaagca atggcgtgcc
     1081 cacagagggc gtgcgggtag cgttgctcac ggccggtcct agcggtggac ccgcgggtgg
     1141 tgcggaacgt cacttccagg ggctgcacga tggtctggta gccatcggtt gctaggtaga
     1201 gtggattaac gttcctgccg atgaaccgga ttttgcaacg attttagata actacaaacg
     1261 ctgtcaggcc atcgacctag agggctttga cgtggtgatc tccaccaaag cgcccacgta
     1321 cgctatcaaa caccctgctc acgtgttgca cttggtgcac acggtgcggg tctttgatga
     1381 catgttcgag actgcctttc ctgtacccaa tgctgaacta tggcagcagc gcgcgacgat
     1441 ccatgcccta gagtttgagc cactgtcgca ggtcaaagcg cgatttgcca atggcaaaga
     1501 gagcagtgat cgtctgtatc gctggcgcgg gatgcatgcg caagtgttgc atcccccgtt
     1561 actgaagaat aatttcgagc aagggcctac tggtgactat ttcttcttac ctgggcgctt
     1621 acactcatgg aagcgggtgg atctgatcat tgaggcggtg cttggttcgt catacccctt
     1681 caaactcaag attgcgggta ctggcgacga tctggatcgt ttgcagaaaa ttgctgataa
     1741 tgaccctcgt atcgagtttc tcgggcgtat cagcgacgag gaggtgatca ccttatatgc
     1801 caacgcattg gcggtaccat ttacgccgc
//
LOCUS       DATBNL010000667         1609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_7400, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000667 DATBNL010000000
VERSION     DATBNL010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7400"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..977
                     /gene="ccsA"
                     /locus_tag="VIC30_11315"
     CDS             123..977
                     /gene="ccsA"
                     /locus_tag="VIC30_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEY7805005.1"
                     /translation="MSTGIVFHAIAAIIYLGLTTVLWGMLQAGKPMETPERVARWVLL
                     LALVAQAVGLDALVLAGGNLHLSWLLALSVAVWLGLVVFWLESLIVKIDGLLLILLPI
                     AGVVTLFTAIFPGSHLITSAAESALRGHLLLALGAYGLITIAAVQSVLMASLDHHLHH
                     PQGVVDNAGALKRAIGRVLDAQPPLLTQERLLFRIIWIAFGALTLAIISGGLISLATT
                     GKWLPFDHKTVFTVLSWLTFGMLLLGRHLWGWRGRIALRYTLVGFVFVLLSYTGSRFV
                     IEVLLNQG"
     gene            980..1264
                     /locus_tag="VIC30_11320"
     CDS             980..1264
                     /locus_tag="VIC30_11320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP0621 family protein"
                     /protein_id="HEY7805006.1"
                     /translation="MGKILFWAVVIIGVLFLTRLLAHHAANRQSGQGNKNTPSTKQAK
                     SSQTETLGKPEDMVRCANCGVYLPQSDAIKQSEQFWCSEDHAKSGTKTRP"
     gene            1298..>1609
                     /locus_tag="VIC30_11325"
     CDS             1298..>1609
                     /locus_tag="VIC30_11325"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY7805007.1"
                     /translation="MPANPPTDKANGWLNLPDIRHKPSPNTDARPAQTPIDLLVIHNI
                     SLPPGEFGTGYAAKLFTNELDFDAHPWFDQIRGLKVSAHFLIERDGQITQFVSCNDRA
                     WH"
BASE COUNT          339 a          447 c          424 g          399 t
ORIGIN      
        1 acgcatcatg tcttgcgtat tggcttcggt cagtcgggct tgaccgcgga tggttttgac
       61 gacgcgccct aggcgctgac tgagattatc tagcattggg tgtcttcgct taaactatag
      121 ggatgtctac aggcattgta tttcacgcca tcgccgcgat catctattta ggtctaacaa
      181 ccgtcctttg gggcatgtta caggccggta agcccatgga aacccctgag cgcgttgccc
      241 gctgggtgct tcttttggcg ctagtggccc aagccgtggg attagatgca ttggtactgg
      301 ccggcggtaa cctgcattta agttggctac tggcgttgtc cgtggctgtt tggttagggc
      361 tagtggtgtt ctggctagag agcctgattg tgaagatcga tggcttgtta ctcatcttat
      421 tgcctatcgc aggcgtggtg actttattca ccgcgatctt ccctggctcg cacctcatta
      481 ccagtgcagc agagtcagcc ctgcgcggtc acttgctact tgccttgggt gcttacgggc
      541 tcatcaccat tgccgctgtt cagagtgtgc tgatggcctc gctcgatcac catctgcatc
      601 acccacaggg cgtcgttgat aacgccggcg ccctcaagcg cgccattggc cgcgtgctcg
      661 acgcgcagcc gccattgctc acccaagagc gtttgttatt ccgtattatc tggattgcat
      721 ttggtgcgct gacactggcg attatttcag gtggcctgat ttcactggcc accaccggca
      781 agtggctgcc gtttgaccac aaaaccgtct tcacggtctt gtcgtggctg acatttggca
      841 tgctactgct cggtcgtcat ctgtggggct ggcgtgggcg cattgcgctg cgttacacgc
      901 tagttggatt tgtatttgtg ctgctgtcgt acaccggcag tcgttttgtc attgaagtgc
      961 tactgaatca aggttaagca tgggcaagat actgttttgg gcggtggtca tcattggcgt
     1021 tctgtttctg acaaggctgc ttgctcacca cgccgccaac cgtcagtcag gccaaggcaa
     1081 taagaacacc ccgagcacca aacaagccaa gtccagccaa accgagacgc taggcaaacc
     1141 ggaagacatg gtgcgctgtg caaactgcgg ggtttacctt ccgcaatcag atgccattaa
     1201 gcaaagcgaa caattctggt gcagcgaaga ccacgccaaa tctggcacta aaactcggcc
     1261 ctaaccaaac taatcaaact aatccaatca tcaagtgatg ccagccaacc cacccacaga
     1321 caaggccaac ggctggctaa acctgccaga catcaggcac aaaccgtcac ccaacacaga
     1381 cgcacgcccg gctcaaacac caattgactt gctggtgatt cacaacatca gtttgccacc
     1441 aggtgagttt ggcacaggct atgcggccaa gctctttacc aatgaattag attttgatgc
     1501 gcacccttgg tttgaccaga ttcgggggct caaggtgtcg gcgcactttc tcatcgagcg
     1561 agacggccag atcacacagt ttgtctcatg caacgaccgt gcctggcat
//
LOCUS       DATBNL010000668         2723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_87954, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000668 DATBNL010000000
VERSION     DATBNL010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87954"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1194
                     /locus_tag="VIC30_11330"
     CDS             <1..1194
                     /locus_tag="VIC30_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY7805008.1"
                     /translation="GSFMRADHPLMAQRLRQAAKHGTQVSSIDLAADDPLLPLHARMT
                     VAPTEMDRALAEVLVALAAAKGVEVPAALSGVTASDAAVKIAASLASGQNVAVLVGNA
                     AMHAVNASQLAANAQWIAQQAGGKLGFLTAGANTVGTYLAGATPQAGGQSVHQMLSEA
                     LKAYVVVNLEPQFDTSLGQRAVDTLKAAKFTVALTPYQSAASDWADVMLPIGPYTETS
                     GTFVNAQGTPQSFKATVTPRGQSRPAWKVLRVLGNLLNLPEFDEESSEAVRDAVLTGG
                     ITSKLGNEVSRTVGLSGLQAQGLERVADVAIYRSDAIVRRAEALQQTSASAVPSARIH
                     PDTVERLGLTDATQVTVRTDSGQSVLSLKSDKTVAPDCVRLPVGFELTAVLGPVDSPL
                     QVERA"
     gene            1194..2267
                     /gene="nuoH"
                     /locus_tag="VIC30_11335"
     CDS             1194..2267
                     /gene="nuoH"
                     /locus_tag="VIC30_11335"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEY7805009.1"
                     /translation="MEWVNAIDQFGAGLLGPTPWLVVWTLIKIIVIAVPIILSVAYLT
                     YWERKMIGFMHVRRGPNRVGFRGLLQPFADVLKLLTKEVIVPSQANKVLFVLAPVVTL
                     MPALAAWAVIPFGPEVVLANVNAGLLYVMAITSIGVYGVIVAGWASNSKYAFLAAMRA
                     SAQMISYELAIGFVLVTVLLVSGSLNLSEIVNVQNRGFFADMGLTFLSWNWIPLLPLF
                     VIYVVSAVAETNRHPFDVVEGESEIVAGHMVEYSGMAFALFFLGEYANMILLSCLAAI
                     MFLGGWAPPVDIAILHWIPGWLWLGIKTFLVVSLFVWFRASFPRYRYDQIMRLGWKIF
                     IPLTGVWLVVVAIWMQTPFNIWD"
     gene            2332..>2723
                     /gene="nuoI"
                     /locus_tag="VIC30_11340"
     CDS             2332..>2723
                     /gene="nuoI"
                     /locus_tag="VIC30_11340"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011871300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEY7805010.1"
                     /translation="MEAIKDFFGSLMLLELLKGMKLTGKYFFKRKITLRYPYEKTPMS
                     PRFRGLHALRRYPNGEERCIACKLCEAVCPALAITIESALREDGTRRTTRYDIDLTKC
                     IFCGFCEESCPVDSIVETHIHEYHGEKRG"
BASE COUNT          523 a          674 c          807 g          719 t
ORIGIN      
        1 ggttcgttta tgcgcgccga tcacccactg atggcgcagc gtttgcgtca ggccgccaaa
       61 cacggcacgc aagtcagcag cattgacctt gccgctgatg atccgttgtt gccgctgcat
      121 gcgcgtatga cggtggcacc aacagaaatg gatcgcgcct tggccgaagt gctggttgcc
      181 ttggctgctg ccaaaggtgt ggaggtgcct gctgcactta gcggcgtaac cgcgtcggat
      241 gccgcggtta agattgctgc gagtttggct agcggacaaa acgttgccgt gttggtgggc
      301 aatgcagcga tgcatgccgt taatgcctca caacttgcag ccaacgccca atggattgcc
      361 caacaggccg gcggcaaact tggattcttg acagctggcg ccaacacagt tggcacctat
      421 ttagccggtg caacaccaca agccggcggt cagtctgtgc atcagatgct ttcagaggca
      481 ttgaaggctt atgtggtcgt caacctcgag ccgcagtttg atacctcgct tggtcaacgc
      541 gctgttgata cgttaaaggc agccaagttt acggtggcac tgacgcctta tcaatcggct
      601 gctagtgatt gggctgatgt gatgttgccg attgggccct acacagaaac gtctggcact
      661 tttgtgaacg cacagggtac accgcagagt tttaaagcca cggtcacgcc gcgcgggcaa
      721 agccgtcctg catggaaggt attgcgcgtc ttgggtaact tgcttaattt gcccgagttc
      781 gacgaagagt cgtcagaggc cgtgcgtgat gccgtgctga ctggtggtat cacctccaag
      841 cttggcaatg aggtgagtcg tacggttggc ttgtcgggac tccaagccca gggtcttgag
      901 cgcgttgctg atgtggccat ttaccgttcg gacgccattg tgcgccgcgc tgaagctttg
      961 caacaaacca gtgccagtgc tgtacccagt gcgcgtattc atcccgatac ggtcgagcgc
     1021 ctcggtctaa cagacgctac acaagtcacg gttcgcactg atagcgggca gtcagtgctg
     1081 tcgctgaagt cggacaagac tgtcgcgcca gattgtgtgc gtttgcctgt gggttttgag
     1141 ctgacggctg ttctaggtcc tgttgattca cccttgcaag tggagcgtgc ctaatggagt
     1201 gggttaacgc gatcgatcag tttggcgctg ggctcctggg ccctacacca tggctcgtgg
     1261 tttggacgtt gatcaagatt attgttattg cggtgccaat cattctcagc gtggcgtacc
     1321 tgacgtactg ggaacgcaag atgattggtt tcatgcatgt gcgtcgcggt ccaaaccgtg
     1381 ttggtttccg tggcttgttg cagccatttg ctgatgtact caaactgcta accaaagaag
     1441 tgattgtgcc aagccaggca aacaaggtct tgtttgtatt ggcgccggtt gtcacactca
     1501 tgcccgcctt ggccgcctgg gcggtgattc cgtttggtcc cgaagtggta ttggccaacg
     1561 tcaacgcggg cttgctttac gtgatggcaa tcacctcgat cggcgtctat ggcgtgatcg
     1621 tggccggttg ggcatctaac tccaagtacg ctttcttagc agccatgcgc gcctcggcgc
     1681 agatgatttc ttacgagttg gccattggtt tcgtcttggt gactgtcttg ctggtgtccg
     1741 gcagtctgaa cttgtctgaa atcgtgaacg ttcagaaccg agggttcttt gccgacatgg
     1801 gtctgacgtt cctgtcctgg aactggattc ctttgttgcc gttgtttgtg atttacgtgg
     1861 tctcggctgt ggctgaaacc aaccgccacc cgtttgacgt ggttgaaggc gaatccgaga
     1921 ttgtggctgg ccacatggtg gaatattctg gcatggcctt cgccctgttt ttcttgggtg
     1981 agtacgccaa catgattctg ttgtcatgtt tggccgccat catgttcttg ggcggttggg
     2041 cgccaccggt tgatattgcg attttgcact ggattcctgg ctggttgtgg ctgggtatta
     2101 agacatttct ggtggtttca ctattcgttt ggttcagggc atcattcccg cgctatcgct
     2161 atgaccagat catgcgcttg ggctggaaga tatttattcc gttgactggt gtttggctgg
     2221 tcgttgtggc gatctggatg cagacaccgt tcaacatctg ggactgagtt tgacactaag
     2281 tttggcactg gggttgaaac tgagcgcgaa ccaacagcaa gagaggtaag catggaagcg
     2341 atcaaggact ttttcggcag tttgatgctc ttggagttac tcaagggcat gaagctaact
     2401 ggcaagtatt tttttaagcg caagatcacg ctgcgttatc cctatgagaa aacgccgatg
     2461 tccccacgtt tcaggggctt acacgcattg cgccgctacc ccaacgggga agagcgttgt
     2521 attgcctgca agttgtgcga ggcggtatgt ccagcgttag ctatcaccat tgaatcggcc
     2581 ttgcgcgaag atggtacgcg tcgcactacc cgctatgaca tcgatctgac caagtgcatc
     2641 ttctgtggct tttgtgaaga gagctgtccg gtggactcga tcgttgagac ccatattcac
     2701 gaatatcacg gtgagaagcg cgg
//
LOCUS       DATBNL010000669         2188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_27782, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000669 DATBNL010000000
VERSION     DATBNL010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27782"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VIC30_11345"
     CDS             <1..653
                     /locus_tag="VIC30_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY7805011.1"
                     /translation="YKIFTDPTWYSGYINSIIYVAINTVITLSVALPAAYAFSRYRFI
                     GDKHIFFWLLTNRMTPPAVFLLPYFQLYTTLGLMDTHLAVALAHLVFNIPLAVWILEG
                     FMSGVPREIDETAYVDGYSFPKFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLT
                     SVDAKPIAATMTRTVSASGMDWATLAAAGVLTIVPGAIVIWFVRNYIAKGFAMGRV"
     gene            673..981
                     /locus_tag="VIC30_11350"
     CDS             673..981
                     /locus_tag="VIC30_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007831606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2160 domain-containing protein"
                     /protein_id="HEY7805012.1"
                     /translation="MFDWMVWTTPVAIFFICIAAMLAVMTVLEVKRPTVPRKGFLPIT
                     TTRGDRLFIGLLTAAYINLLFLGVAGHIAQWLSMYEEPSIWWGFGLSVIWFITVMRKG
                     "
     gene            1071..>2188
                     /locus_tag="VIC30_11355"
     CDS             1071..>2188
                     /locus_tag="VIC30_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013804446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7805013.1"
                     /translation="MKLRYCTLAATIALAFTTSSAWADEAAAQRWINDEFQPSTLTKD
                     EQLQEMKWFIDAAAKLKAKGVDEINVVSETITTHEYEARTLAKAFTEITGIKVNHDLI
                     QEGDVVEKLQTSMQSGQSIYDGWISDSDLIGTHWRYGQIMSLSDYMTGAGKEFTNPGL
                     DLDDFIGISFTTAPDGEIYQLPDQQFANLYWFRADLFERDDLKQQFKAKYGYDLGVPL
                     NWSAYEDIAEFFSNDVKTIDGKPIYGHMDYGKKDPSLGWRFTDAWLSMAGTADIGIPN
                     GRPVDEWGIRTTIDGCNPVGASVSRGGATNSPAAVYALTKYIDWMKDYAPKEAIGMTF
                     SEAGPVPAQGEIAQQIFWYTAFTADMTKPGLPVVNEDGT"
BASE COUNT          534 a          552 c          561 g          541 t
ORIGIN      
        1 actacaagat attcacggat ccaacttggt attcaggcta catcaacagc atcatctacg
       61 tggcaatcaa taccgtcatc acattgagcg tcgcgctgcc agcagcctat gcatttagcc
      121 gctatcggtt tatcggtgac aagcatatct ttttctggct actgaccaac cgaatgacgc
      181 cacctgcggt gtttttgttg ccgtacttcc agctgtacac cacgcttgga ctaatggaca
      241 cgcacttagc ggttgccttg gcgcatttgg tattcaacat accgctagcg gtctggattc
      301 ttgagggctt catgagcggc gtccctcgtg aaatcgatga aacggcctat gtggatggtt
      361 acagctttcc gaaatttttc ctgaccatct ttttgccact gatcaaggca ggcgttggcg
      421 tggccgcttt cttttgcttc atgttcagtt gggtggaact gcttttggcg cgaaccctga
      481 caagtgttga tgccaaaccg attgccgcga ccatgacgcg aacggtcagc gcctctggca
      541 tggactgggc cacacttgca gcggccggtg tcttaaccat cgtgccaggc gccattgtga
      601 tctggtttgt acgtaactac atcgcaaagg gttttgcgat gggtcgggtc taagagacac
      661 aaggagacga tgatgttcga ctggatggtc tggacaacgc ctgttgccat cttcttcatt
      721 tgcattgctg ccatgctggc ggtgatgaca gtgcttgaag tcaaacgacc caccgtacca
      781 agaaaagggt tcttaccgat caccaccacc cgcggtgacc gtctgttcat tggcttattg
      841 actgcagcct atatcaacct acttttctta ggcgtggccg gtcacattgc ccaatggtta
      901 tcaatgtacg aagagccatc aatctggtgg ggatttggac tatcggtcat ttggtttatc
      961 accgtcatga gaaaaggtta gtcaagcttt acaagaacgc cgactgttgt tcccgaggtc
     1021 ggacgctaaa acacgaaggg aacttagcac tgccaattga ggagatcgac atgaaattgc
     1081 gctattgcac tttggcagct accatcgccc tggcatttac gacctctagt gcctgggcag
     1141 atgaggctgc tgctcaacgt tggatcaatg atgaattcca accctctacg ctgacaaagg
     1201 atgaacaact gcaagagatg aagtggttta tcgatgcagc ggccaagcta aaggccaaag
     1261 gcgttgatga aatcaatgtt gtgtcagaga caatcacgac acacgaatac gaggcacgta
     1321 cccttgccaa ggcttttact gaaattacgg gtatcaaagt caaccatgac ctgatccaag
     1381 aaggtgatgt ggttgaaaag ctccagacct ccatgcaatc gggccagtct atttacgacg
     1441 gctggatctc agactccgat ttgatcggta cgcactggcg ttatggtcag atcatgagct
     1501 tgtctgacta catgacaggt gccggcaaag agttcaccaa cccgggcctt gatcttgatg
     1561 acttcatcgg tatcagtttc acgacggcac ctgatggcga gatctatcaa ttgccagacc
     1621 aacagtttgc caacttatat tggttccgtg ccgacttgtt tgaacgcgat gatttaaagc
     1681 agcagttcaa ggccaagtat ggctatgact taggtgtgcc actgaactgg agtgcatacg
     1741 aggacatcgc ggagttcttc agcaacgacg tcaagaccat tgatggcaaa ccgatttacg
     1801 gtcacatgga ctacggcaag aaagacccat cgctgggatg gcgcttcacc gatgcttggt
     1861 tatccatggc gggtacggcc gacatcggca ttccaaatgg tcgaccagtt gacgaatggg
     1921 gtattcgcac caccattgac ggatgcaacc ccgtcggcgc atcagtttca cgaggtggtg
     1981 ctaccaactc accggccgct gtttacgcgc tgacaaaata cattgactgg atgaaagact
     2041 acgcgcctaa agaagcgatt ggcatgacgt ttagtgaagc cgggcccgtt ccggcacaag
     2101 gcgagattgc ccaacaaatt ttctggtaca cagccttcac agctgatatg accaagccag
     2161 gtctcccggt ggtcaatgag gatggcac
//
LOCUS       DATBNL010000670         2102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167763, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000670 DATBNL010000000
VERSION     DATBNL010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167763"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VIC30_11360"
     CDS             complement(<1..431)
                     /locus_tag="VIC30_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010925730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7805014.1"
                     /translation="MKANDFLFTSESVSEGHPDKVSDQISDAVLDAIFTQDPNARVAA
                     ETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNSDYGIDYKGCAVLVAYDKQS
                     PDIAQGVDRTSEEFLNQGAGDQGLMFGYACDETPDLMPAPI"
     gene            675..1532
                     /locus_tag="VIC30_11365"
     CDS             675..1532
                     /locus_tag="VIC30_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014906035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY7805015.1"
                     /translation="MFHLLLRLLAQLPLSTLQTMGRAIGRLVFALPGRYRDRLIANAN
                     QAGYHDPAFYKRAAAEAGATFMELPKVWFHTQYCLDKVIDDHEEILLEARAAGRGILY
                     LTPHLGSFEMSARYGAQHTPLTVMFRPPRKAFLRPILGIMRNASGVTAIPADMKGVRH
                     FLKALKKQEAVGMLPDQVPRQGEGIWAPFFGREAFTVTLPGKLAQMTNAIVIVAACER
                     LPRGQGWRMHYRRAPETLPDTPREQAALFNSMMQDLIKQFPTQYLWGYYRYKIPKGVA
                     PPPDAIARD"
     gene            1525..>2102
                     /locus_tag="VIC30_11370"
     CDS             1525..>2102
                     /locus_tag="VIC30_11370"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805016.1"
                     /translation="MTNNRPPAPEQSPNRASELRALKSQSFAAWLLVSSLEWLARSSM
                     RTRLRVGRILTSVAWVTLRRRRRIAQRNIELCFDDLSASERKKLLREHFRALTQSFVD
                     RSVIWFGTPDEIRAFVTVSGIEQIHAYTDRHEPAMLLAPHFIGLDAAASRLTLAGPEG
                     ATIYAEQRNKLIDDFVRLGRGRFHNVHLISRR"
BASE COUNT          460 a          591 c          561 g          490 t
ORIGIN      
        1 caaatcggtg cgggcatcaa gtccggcgtt tcatcgcagg cataaccaaa catcagacct
       61 tggtcgcccg cgccttgatt gagaaactct tcggaggtgc gatccacacc ctgagcgatg
      121 tcgggtgact gcttgtcgta agcgaccagc accgcgcaac ccttgtagtc aatgccgtaa
      181 tcactgttgt cataaccgat gcgcttgatc gtgtcgcgcg ccacctgaat atagtcaaca
      241 ttggcagtgg tggtgatttc accagcgagc acgaccagac ctgtgttgca cagtgtctca
      301 gcggccactc gggcgttggg atcttgcgtg aagatcgcat caagcacggc atcagagatc
      361 tgatcagaga ctttgtcagg gtggccctca gaaacagatt ccgaggtgaa gagaaaatca
      421 ttggctttca ttgacatatc aacatcctta ctcaagctag gcagatttaa ataatctgct
      481 ggttactggg tgcgctgcac ccctgtaacc tctgtcttga gtggcttgag agacaagccg
      541 atgtgacgtt ggtcctgggc gcgacgcttt agcggataat gtccagaatc cttggttatc
      601 agatccggct ggtcgtcccg caagttgtcg gttaactcaa cgaccaaact ccattttaag
      661 cgaaaatacg ctttatgttt catttgttgt tacggctgct cgcgcagcta cctctgtcca
      721 cgctgcaaac catgggtcgc gcaatcggcc gtctggtgtt tgcgcttcct ggtcgctacc
      781 gcgacaggct cattgccaat gccaatcagg ccggctatca cgacccagcg ttttacaaac
      841 gagccgctgc cgaagcgggc gcgactttta tggaattgcc caaggtctgg ttccacactc
      901 agtactgttt ggataaggtc attgatgacc acgaagaaat tctgcttgag gcacgtgcgg
      961 ctggacgtgg gattttgtat ctcaccccgc acctaggtag ctttgagatg tcggcgcgct
     1021 acggtgccca acacactccg ttaacagtca tgtttcgccc cccgcgcaaa gctttcctgc
     1081 gaccgattct gggcatcatg cgcaacgcct ctggggtgac tgccataccc gccgacatga
     1141 aaggtgtgcg ccatttctta aaggccctta agaaacaaga agccgttggc atgctgcccg
     1201 atcaggtgcc acgccaaggc gagggcattt gggcgccttt ttttgggcgc gaagcgttta
     1261 ctgtcacttt gcccggcaaa ctagcgcaga tgaccaatgc cattgtgatc gtcgcagctt
     1321 gtgaacgtct acccagaggg caaggctggc gcatgcacta ccggcgggca ccagaaacac
     1381 tgcccgacac gccgcgcgag caggccgcgt tgtttaacag catgatgcaa gacttgatta
     1441 aacaattccc cacccaatac ctgtggggct attaccgcta caagataccc aagggtgtcg
     1501 caccaccgcc ggatgccatt gcccgtgact aacaaccgtc cacctgcacc agaacagtca
     1561 cctaaccgtg cttcagaatt gcgtgcactg aagtcgcagt catttgccgc ttggttattg
     1621 gtatccagtt tagagtggct agcgcgttcg tcgatgcgca cccggttgcg cgtgggacgg
     1681 atactgacaa gcgtggcatg ggtcaccttg cgtcggcgtc ggcgaatcgc ccaacgcaat
     1741 atcgaattgt gctttgatga tctctcggcc tctgagcgta agaagctgtt gcgcgagcat
     1801 ttccgtgcac tgacacaaag ctttgttgat cgcagtgtga tctggtttgg cacgcctgac
     1861 gaaattcgtg cgtttgtcac tgtcagtggc attgaacaaa tccatgccta cactgaccga
     1921 catgaaccag ccatgttgtt ggcgccacac ttcatcggcc tagacgcagc cgcaagccga
     1981 ctgaccttgg ctggcccgga aggtgcaacc atctacgctg agcaacgcaa taaactgatc
     2041 gacgactttg tgcgtcttgg ccgcggccgg tttcacaacg tgcatttgat cagccggcgc
     2101 ga
//
LOCUS       DATBNL010000671         1944 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117351, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000671 DATBNL010000000
VERSION     DATBNL010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117351"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /locus_tag="VIC30_11375"
     CDS             <1..313
                     /locus_tag="VIC30_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018573905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEY7805017.1"
                     /translation="AIEGELRKYDAELYAKPRWLVLNKFDMIDNAEEVTQQFVEQSQW
                     QGPVYAISALNGDGTQQLIYDLQGMLDKSKADEQRAQDIADGTAEFEDPRFDPNRDSQ
                     A"
     gene            310..1443
                     /gene="proB"
                     /locus_tag="VIC30_11380"
     CDS             310..1443
                     /gene="proB"
                     /locus_tag="VIC30_11380"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEY7805018.1"
                     /translation="MTIGTPAPVKTSARLVVKVGSSLVTNDGQGLDLAAVSQWCEQIA
                     HLHQTGKQVVLVSSGAIAEGMARLGWKRRPSEMHELQAAAAVGQMGLAQAYESAFAKH
                     GLKTAQVLLTHEDMADRRRYLNARSTLLALLRFGIVPIVNENDTVSTDEIKVGDNDTL
                     GALVANLVEAESLVILTDQAGLYNQDPRHNPDARLITRAQADDPTLVPMAGGAGSHLG
                     KGGMLTKVLAAQRAAKSGASTIIASGREANVLTRLADGESIGSTLLASEPIWSARKQW
                     MADNLRLRGRLILDTGAVKALLQDGKSLLPVGVRDVEGVFEQGDLVACIDPDGRECAR
                     GLINYSSSETRRIMGKPSSQIADILGEMTESELIHRDNLLVLG"
     gene            complement(1463..>1944)
                     /locus_tag="VIC30_11385"
     CDS             complement(1463..>1944)
                     /locus_tag="VIC30_11385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805019.1"
                     /translation="ITFFRVFGFLALFSTLTGCGAIYDSIVPPPPDERQKVAFYFAQD
                     DYEQGLVMRTARGGEPKVYAQQTPIVQGTDIKMAVPMKDAAGYFFVGIQLNDSGARKL
                     AQSTPQMIGMQLALVVDDRLLGVALIDGPIDKGTFAMATSSKNAAFVLSDLLSPASR"
BASE COUNT          471 a          563 c          527 g          383 t
ORIGIN      
        1 tgccatcgag ggcgagctgc gcaaatacga tgccgagctt tacgccaaac cccgttggct
       61 ggttttgaac aaattcgaca tgatcgacaa tgccgaagag gtcacacaac agtttgttga
      121 gcaaagccaa tggcaaggac ccgtgtacgc catctcggcc ttaaacggtg acggcaccca
      181 gcaactgata tatgacctgc aaggcatgct cgacaaaagc aaagccgacg agcaacgcgc
      241 tcaagatatc gcggacggca ccgccgaatt cgaagacccc cggtttgacc ccaacagaga
      301 cagccaggca tgaccatcgg tacacccgct ccggttaaga ccagcgcccg tttggtggtc
      361 aaagtcggct ctagtctggt caccaacgac ggccaggggc tagacctcgc ggcagtgagc
      421 caatggtgcg aacagatcgc ccacctgcat caaaccggca agcaggtggt gttggtgtca
      481 agcggtgcca tcgcagaagg catggcacgg ctcggctgga agcgccgccc tagtgaaatg
      541 cacgaattgc aagctgccgc cgcagtgggc caaatgggtt tggcacaagc ctacgaaagc
      601 gcctttgcca aacacggctt aaaaacagca caagtgttac tcacccatga ggacatggca
      661 gaccggcgcc gctatctcaa cgcgcgctca accttgctgg ctttattgcg atttggcatt
      721 gtgcccatcg tcaacgagaa cgacaccgtc tcaaccgatg aaatcaaagt cggcgacaac
      781 gacaccctag gcgcattggt cgccaacctc gttgaagccg agtcgctcgt tatcctgacg
      841 gatcaagcag gtctttacaa ccaagaccca cgtcacaacc ccgatgccag actcatcaca
      901 cgcgcccaag ccgatgaccc cacgcttgtt cccatggccg gcggtgccgg cagccatctt
      961 ggtaagggtg gcatgttgac caaagtactc gcagcccaac gtgccgctaa aagcggtgcg
     1021 tcaaccatca tcgcatccgg tcgtgaagca aacgtgctaa cgcgcttggc tgatggggag
     1081 tccattggct caaccttact ggccagtgaa cccatttggt ctgcccgcaa acagtggatg
     1141 gccgacaact tgcgcctgcg tggtcgtttg atactcgata ccggtgcggt caaagctctg
     1201 ctgcaagacg gcaagagcct gctgccggtt ggcgtacgtg acgtagaagg tgtgtttgag
     1261 caaggtgatc ttgtcgcatg cattgaccct gatggtcgtg agtgcgcacg cggactgatc
     1321 aattattcct catctgagac ccgccgcatc atgggcaagc caagcagcca gatcgcagac
     1381 atcctcggtg agatgaccga gtctgagctc atccatcgtg acaatttgct tgtcctaggg
     1441 tgagacctcg ctgcacccag ttctagcgag acgcggggct cagtaaatcc gacagcacaa
     1501 aagcagcgtt tttacttgat gtcgccatgg caaatgtgcc cttgtcgatc ggcccgtcaa
     1561 tcaatgcaac cccaagcagt cgatcatcaa cgacaagcgc cagttgcatg ccaatcatct
     1621 gtggtgtgct ttgcgccaac ttgcgagcgc cactgtcgtt tagttgtatg ccaacaaaaa
     1681 agtagcccgc ggcatctttc atgggcacag ccattttgat gtccgtgcct tgaacaattg
     1741 gggtttgttg ggcatagacc ttgggttcac cgccacgggc ggtgcgcatg accaaacctt
     1801 gctcgtagtc gtcttgcgca aagtaaaacg ccactttctg gcgctcatca ggcggtggcg
     1861 gcacgatgga gtcgtagatc gcgccgcagc cggtgagagt gctgaataac gctaaaaacc
     1921 caaatacacg aaaaaaagta atgc
//
LOCUS       DATBNL010000672         1744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_107734, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000672 DATBNL010000000
VERSION     DATBNL010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107734"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..277)
                     /locus_tag="VIC30_11390"
     CDS             complement(110..277)
                     /locus_tag="VIC30_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805020.1"
                     /translation="MKILILLVMLVTVQTRYLVSCNSDQAHKALFMPLASDFICKPVF
                     PPTPLALLERR"
     gene            complement(274..1122)
                     /gene="cpaB"
                     /locus_tag="VIC30_11395"
     CDS             complement(274..1122)
                     /gene="cpaB"
                     /locus_tag="VIC30_11395"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEY7805021.1"
                     /translation="MNQKKEQWLQLGKRLALPLVLGVATVLGVHHYLSGRIEAIDAQS
                     QQDMVTRIVAVSALPAGTTLLFDHLSLRDMPKAWASVDSFTAEQVEELEGLVLIQDVM
                     AGQPLTRTIVQSPTPPALSQQLGPGRRAMTIPVDHISSLSGRLEAGDLIDLYVTFTHR
                     GERVTTLLVDAVRVLATDRSNRAYEFAASEQSVTSVTLNVSAKQAVKLVSANQGGALT
                     AVLRMDEGSLTDAGPTTGREDGKARAAERADHLAGFVGLAPSFGEGLAPNIIYGDAGS
                     GLESMP"
     gene            complement(1139..1552)
                     /locus_tag="VIC30_11400"
     CDS             complement(1139..1552)
                     /locus_tag="VIC30_11400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805022.1"
                     /translation="MALSRALASAVYRWCKPCVTVLLTTPAACFAAAPCAAWQDWPYE
                     AISALTPCDQAPVERRIGKVCVRHEWRCGQGDFQDWLAHWLSELKDPVRVEKRQGQLI
                     FSGEDQTTAWAVFWAIDPSTEPGFALLLSRLRAQP"
     gene            complement(1561..>1744)
                     /locus_tag="VIC30_11405"
     CDS             complement(1561..>1744)
                     /locus_tag="VIC30_11405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805023.1"
                     /translation="RIGKAHKLWARHALASQTVARTLLPSISAVEMPWPDRGSATDWL
                     SQWQGSTPESYVGSGR"
BASE COUNT          415 a          540 c          437 g          352 t
ORIGIN      
        1 tgcaaacgca ccacgtgagc actgcccgct tctagtgaca aagtttcagc cgcccagcaa
       61 tcaacgcata acagccacca tggcaatagg aaataaacag ccaccctcat caacgtctct
      121 ccaaaagtgc cagtggcgtg ggaggaaaca cgggtttaca gatgaagtca gatgccagcg
      181 gcataaacaa ggctttatgc gcttgatcac tgttgcaact gaccagatac cgggtttgta
      241 ccgtcacgag catgaccaac aaaatcaata tcttcacggc attgattcca ggccagaacc
      301 cgcatcgcca taaataatgt ttggcgccaa cccctcgcca aatgaaggcg caagcccgac
      361 aaaccccgcc aaatgatcgg ctcgctctgc tgcacgcgct ttaccatcct cacgcccggt
      421 tgtaggtcca gcgtcggtca gactgccttc atccatgcgc aacaccgcgg tcagcgcacc
      481 gccttggttg gcggacacca atttaacggc ttgtttagct gacacattca gggtgactga
      541 agtgaccgac tgctcactgg ccgcgaattc ataggctcga tttgatcggt ctgtcgctaa
      601 tacccgcacc gcatcaacca acaatgtggt gacacgctca ccacgatggg taaaagtgac
      661 gtagagatca ataaggtcgc cggcctccaa tctgcccgaa agcgagctga tgtggtcaac
      721 cggtatggtc atggcacgtc ttcctggccc gagctgttgc gacaatgccg gcggtgtcgg
      781 tgattgcaca atcgtgcgtg tcaatggctg tccagccatg acatcctgaa tcaacaccag
      841 tccctcaagt tcctcgacct gctcagctgt aaaactgtcg acactggccc aagctttggg
      901 catgtcgcgc aaagacaagt ggtcaaacaa caacgtggta cctgcaggca aggcactgac
      961 agccacgatg cgcgtgacca tgtcttgttg tgactgcgca tcaatggcct cgatacggcc
     1021 actgagatag tgatgcacac ccagcacagt tgccacaccg agcaccagcg gtaacgccag
     1081 tcgcttaccg agttgtaacc attgttcttt tttctgattc atgaccgtcc tttattgttt
     1141 aaggctgcgc acgcaagcgc gataaaagca aggcaaatcc gggctctgtt gagggatcaa
     1201 tcgcccaaaa aacggcccag gccgtcgtct ggtcttcacc gctaaaaatc agctgccctt
     1261 ggcgtttctc aacccgcacc ggatccttga gctcagacag ccagtgggca agccaatcct
     1321 gaaagtcccc ttggccacaa cgccattcat ggcgcacgca cactttccca atccggcgct
     1381 caaccggcgc ctggtcacac ggtgttaacg cgctaatggc ttcgtagggc cagtcctgcc
     1441 aggcggcgca cggtgccgca gcgaaacagg ctgcaggcgt ggtcagcaag accgtcacgc
     1501 atggcttaca ccagcgatac accgcgctcg ctaacgctct actgagcgcc atgcttcgcc
     1561 tcatcgtcca gaccccacat aggattcggg cgttgatccc tgccactgtg acaaccagtc
     1621 ggtggcacta ccacgatcgg gccacggcat ctctacggcc gaaatcgatg gcagcaatgt
     1681 gcgagccacc gtttggcttg ccagggcatg gcgtgcccac agcttgtgtg cctttccaat
     1741 acga
//
LOCUS       DATBNL010000673         3004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117353, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000673 DATBNL010000000
VERSION     DATBNL010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117353"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1502)
                     /locus_tag="VIC30_11410"
     CDS             complement(108..1502)
                     /locus_tag="VIC30_11410"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004351 - glutamate decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006540 - glutamate decarboxylation to
                     succinate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HEY7805024.1"
                     /translation="MTQNAKPTDDSADDIYASTELSQSLPKTHFPDQERHPRNVFSAV
                     RDELMLDGNSRQNLATFCQTWVEDEVQELMALSIDKNMIDKDEYPQTAEIERRCVAML
                     ADLWNSPESETTLGCSTIGSSEAAMLGGLALKWQWRKRQAAAGKPTDKPNMICGPVQI
                     CWHKFARYFDVELREIPLEGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKA
                     VSDALDKLQADTGLDIPIHVDGASGAFLAPFCAADIEWDFRLPRVKSINASGHKFGLA
                     PLGAGWIVWRETADLPEELIFNVNYLGGNMPTFALNFSRPGGQIIAQYYNFLRLGREG
                     YAKIHNACYKTAQYLADEIGKMGPFDILYNGDSQEGIPALCWKLKDGYETNGYTLYDI
                     ADRLRSRGWQVPAYSMPADREDLVIQRILVRHGVSIDLAELLLDDMRRALEHFGKHPV
                     AEPLTRAEAGGYSH"
     gene            complement(1727..2575)
                     /locus_tag="VIC30_11415"
     CDS             complement(1727..2575)
                     /locus_tag="VIC30_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013899314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY7805025.1"
                     /translation="MTTDAAIRLDIRPMAGAIGAEIHGVDLLHDQSPEIIQAIRDVWL
                     QFGVVVFRDQPLTPAQFQAFAEQFGETVEYPFVKGLDDFPKIMPVLKLPHERNNFGGV
                     WHTDTAYLQTPPMATMLIAREIPPKGGDTLFASGYAAYEGLSPGLQQTLEQLTAVNSS
                     AKAEVTKTREDRIADSATAQARETLTGEHPVIRTHPETGRKSLYVNPAHTTHFVGWTE
                     EESTSLLAFLYAHQVKPEFTCRISWQPDTIVLWDNRCVLHYPINDYHGYKRLLHRITL
                     KGDTPR"
BASE COUNT          660 a          785 c          824 g          735 t
ORIGIN      
        1 gggtcgaggc aggttgaaag tatctacggg tttaaggggt ttagggggca cttcaattta
       61 acccgcaggt caaatcgaag tgctttcatc atgccgcagt gacaactcta gtggctgtaa
      121 ccacctgctt cagcgcgggt cagtggttca gccactgggt gcttgccgaa atgttcaagc
      181 gcacgacgca tatcgtctag caacaactcg gccagatcga tgctgacacc gtgacgtacc
      241 agaatgcgct ggatcaccaa gtcttcacga tcggcaggca tcgaataagc cgggacttgc
      301 cagccacggc tacgcaggcg atcggctatg tcgtacagcg tgtagccgtt ggtctcatag
      361 ccatccttaa gtttccagca cagagctgga ataccttctt ggctgtcacc gttatagagg
      421 atatcgaagg gacccatctt gccgatttcg tcagccaaat actgggcggt tttgtagcaa
      481 gcgttgtgga tcttggcata accctcacgg cctaagcgca agaagttgta atactgggcg
      541 atgatctgac caccagggcg cgagaaattc aacgcaaagg tcggcatgtt gccaccgaga
      601 tagttcacgt taaagatcaa ctcttcaggc agatcggctg tttcacgcca gacaatccag
      661 ccggcaccca aaggcgccaa gccgaacttg tggccagacg cgttgatgga cttcacgcgc
      721 ggcagacgga aatcccattc aatgtctgcg gcacaaaagg gtgccaagaa ggcaccactg
      781 gcaccgtcga cgtgaatggg aatgtcgagg cctgtgtcag cttgcaattt gtcgagcgca
      841 tcgctaaccg ctttgaccgg ttcgtactgg caggtgaacg tcacgccgag cgtgggcacc
      901 acgccaatgg tattctcatc acagcgcttg ataacctctt caggggtcat gatcagacga
      961 tcaccctcaa gtgggatctc gcgcagctcg acatcgaagt agcgcgcgaa tttgtgccag
     1021 cagatttgta ctggaccgca aatcatgttg ggtttgtcag tgggtttgcc agctgcggcc
     1081 tgtcgcttgc gccactgcca tttcaacgcc aagccaccga gcatggcggc ttctgacgag
     1141 ccaatggttg aacaacccag cgtggtttct gattcgggtg agttccacag atcagccagc
     1201 atggccacgc agcgtcgctc tatttcagcg gtctgcggat actcgtcttt gtcgatcatg
     1261 tttttatcga ttgacaaggc catgagctct tggacttcgt cttcgaccca ggtctgacaa
     1321 aacgttgcga ggttctggcg ggaattgcca tcaagcatca actcatcacg cacggcactg
     1381 aacacgttgc gtgggtggcg ttcttgatcg gggaagtgtg tcttcggcag tgactgcgac
     1441 agttctgttg acgcgtaaat atcgtcagca ctgtcatctg tgggttttgc attttgagtc
     1501 atgagcatcc tttgttgagc aaacctgagc tatgtacgac acttgggaac agacttgcaa
     1561 ccaagcgaat ccgtgcaact gttctagagg ttacacatat ttgatgaagg atgcgagaca
     1621 agaagccctc aggaaatccc cagccgggcc tctactaggc cccaggtaag cctcaaccaa
     1681 gcctttcatc aatgctcaag tgttcggggg tcgggtagtt aggagctcag cgcggcgtgt
     1741 cgccctttag cgtgatgcgg tgcagcaggc gtttgtagcc gtgatagtca ttgatggggt
     1801 aatgcagcac acagcggttg tcccatagca cgatggtgtc aggttgccag ctgatgcgac
     1861 aagtgaactc gggcttgact tgatgcgcgt ataaaaacgc cagtagcgag gtactttcct
     1921 cttcggtcca ccccacaaaa tgggtggtgt gtgcggggtt cacatacagc gatttgcgcc
     1981 cagtttctgg atgggtgcgg atcacgggat gttcgcccgt caaggtttcc cgcgcctgcg
     2041 cagttgccga gtcagcgatg cggtcttcgc gggttttagt gacttcggct ttggctgagg
     2101 agttcaccgc tgtgagttgt tcaagggttt gctgcaggcc cggtgaaagt ccttcgtagg
     2161 ccgcgtaacc actggcaaac aaggtgtcgc cacctttggg tggaatctca cgggcgatta
     2221 acatggtcgc catcggtggt gtctgcaggt aggccgtatc cgtgtgccag acaccaccaa
     2281 agttatttcg ctcatgcggc agtttgagta ccggcatgat tttagggaag tcatcgagcc
     2341 ctttgacaaa tggatactcg actgtttcgc caaactgctc ggcaaaggct tgaaactggg
     2401 ctggggtcag cggttggtct cgaaacacca ccaccccgaa ctgcagccaa acatcgcgga
     2461 tggcttgaat gatctcaggt gactggtcgt gtagtaagtc cacgccgtga atttcagcgc
     2521 caatggcacc ggccatgggc cgaatatcga gtctgattgc tgcgtctgtt gtcatctctt
     2581 gtctcacagg cctaagccga accctaagtt tattcttagt cgtcctgacg ttctcgacct
     2641 tgttgttgat gttgttgtga ttgttacatc attttttata gcctaagtat gtcacgtcag
     2701 tcgtactttg cgccagcgcg agcgtattcc gatgtggcat gcgtctaaag aatgtcttgt
     2761 gtttctaata cgagatgcgt ctgaagcgcc tcgtcatctg ttgttaatct ctattgcgag
     2821 tgctatgcct gacaccaaca gtcgggtatt ctattggcga gtcacaagtc tcgccataac
     2881 gcgttttgtc gtgctgcgag tcaaccatcg caaaataaac atcacaaaag actaccacct
     2941 cgcctatgtc ctcaagcacc cctgagtcgg tccgctcccc tcaaacccac agcacctcga
     3001 gact
//
LOCUS       DATBNL010000674         2224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_157699, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000674 DATBNL010000000
VERSION     DATBNL010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157699"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..942
                     /locus_tag="VIC30_11420"
                     /pseudo
     CDS             148..942
                     /locus_tag="VIC30_11420"
                     /inference="COORDINATES: protein motif:HMM:NF018928.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SapC family protein"
     gene            1167..>2224
                     /locus_tag="VIC30_11425"
     CDS             1167..>2224
                     /locus_tag="VIC30_11425"
                     /inference="COORDINATES: protein motif:HMM:NF024972.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase"
                     /protein_id="HEY7805026.1"
                     /translation="MANSVEYFGITGDDAVDGLTNGYRWLADSQNTLSYSLSGGFSGE
                     YFTNPDLMLGYFGDAIESFSDFADIGFRNAGQYDTPIAAYRAGSDINLSIDGAGLLFP
                     SPSSWALGFFPATQYLSSPYAGAAGDVFINTQSAANSLPSYAPGSQGYFLLLHEIGHS
                     LGLKHPHDDGGTGRPTFNELGIGRLDQDYVSIMSYNDDAAWNLIEWDPATPMVFDVIA
                     MQYLYGKNPTTNAGDSFIEVQRTGMYHSIWDASGTDTVSAATAGEGWLIELPSFTISD
                     LVDTKIGRAEPLADLQATVPQDLVWLLGDMENALGSNYDDLILGNDLDNWLQPQGGND
                     RVDGGGGSDMVLYNLNVE"
BASE COUNT          524 a          564 c          596 g          540 t
ORIGIN      
        1 tgggtaacaa gtgcttgaac tggccgggaa agttctggtg aacgagcagg attttcatgg
       61 ggaatcaatg ccgggctatt cgggtggcta acgctcttac aatagtaact aaagcaatcg
      121 acgcaaatag atagaggaca atcttccatg gcgatcaccc cggtctctta ctctcagttt
      181 ggcacaaagc gtttcaaacc caacgattca tatgcgtttg cagccaagga ccccatggcg
      241 ccactgacac taaaggaact cgtgcctgcc tccatggcca tgcccatcgg ctttaccaag
      301 gctcaagaca cattcatccc cgtggctgtg ctggggattg gcaatcaaat aaacctgttt
      361 gttgcaccgg acggacgttg ggtggggcgt tatgtacctg ccgcttaccg tcactatccc
      421 tttgtgctgg ccaacggccc ggaaaaaaaa caaatcctgt gttttgagga cagcagcggt
      481 ttagtgacgg acaatgcagg cgagccattt ttttcagatg atggcaaacc gaccgaagcc
      541 atcaacgagg tgttggattc gttaacacag taatcagcca atcggcaggc caccatccaa
      601 gtgtgtaaac ttttggcggc acacgagctc atcgagcctt ggccaatcaa gttaaaaaac
      661 gagccagatg cgcccgaaca aatacttgag ggcctgtatc gcattaatca aaacgcactc
      721 aatgcgctca ccgaaaagcc tctgcatgca ttgcaccgat tcggtgcctt gccgatgatt
      781 tactgccaat tactatctat gcagcacttg agcatgctag gtgagtttgc tcgggcgcga
      841 cagcttgctg agcagcatgc cgcactgcca aagaacaaat ccggtgaaat cgatctgtcc
      901 tttcttgccg atgacacaac catcagtttt gataatctgt gatgtgtgtt gtcgcgcacc
      961 catgacacgg gtcgtcatct gatcagtgcc ccagtgcatc actcaggaaa ccgcatgtca
     1021 gttacgtgtg gcattaacat gtgggggtag ggtgatcgtc gaaggataag gtgacggtta
     1081 gggtatgacc gagtcacacg actagtcaca gcaccccgca ggtctatggt gatccggggc
     1141 gcctgtagac atggatcgga ggtcgcatgg ccaacagcgt cgaatatttt gggatcacag
     1201 gcgacgatgc ggtcgatggc ctgaccaatg ggtaccggtg gttggccgat tcgcaaaaca
     1261 ccctgtccta ctcattgtct ggtgggttta gcggtgagta tttcacgaac ccggatttga
     1321 tgctcggcta ctttggcgac gcgatcgagt cattttctga ctttgcggat attgggtttc
     1381 gcaatgctgg ccagtacgac acgccgattg ccgcctatcg cgcgggcagc gacattaatc
     1441 tatccatcga tggtgccggt ttgttgttcc ccagcccctc atcctgggca cttgggtttt
     1501 ttccagccac ccagtatttg agctcaccat acgcaggtgc tgcaggcgac gtgttcatca
     1561 acacgcaaag cgcagccaac tcgctaccaa gttatgcgcc aggctcacaa ggctattttc
     1621 tgttgttgca tgagattggc catagtctcg gtcttaaaca cccccatgat gatggcggta
     1681 cgggacgtcc gacttttaac gaacttggta tcggacgact cgatcaggac tatgtgtcaa
     1741 tcatgtcgta caacgatgac gcagcctgga atctgatcga atgggaccca gctacaccca
     1801 tggtgtttga tgtcattgcc atgcagtacc tgtatgggaa aaatccgacc accaatgccg
     1861 gcgattcatt tattgaagtt cagcgcacgg gaatgtatca ctccatctgg gatgcgtcgg
     1921 gcaccgacac cgttagcgct gccacggcgg gcgagggttg gctcattgag ctgccgagtt
     1981 ttacgatatc ggatctggtt gataccaaga ttggccgtgc cgagccgctg gctgatttgc
     2041 aagcgaccgt accgcaagat ttggtatggc tgcttggcga tatggaaaat gccttaggct
     2101 caaactacga tgatttgatt cttggtaatg accttgacaa ttggctgcaa ccacagggtg
     2161 gtaacgatcg cgtcgatggc ggtggtggca gtgatatggt gctctataac ctgaatgttg
     2221 agca
//
LOCUS       DATBNL010000675         3247 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_196799, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000675 DATBNL010000000
VERSION     DATBNL010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196799"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(426..1676)
                     /locus_tag="VIC30_11430"
     CDS             complement(426..1676)
                     /locus_tag="VIC30_11430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011483949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HEY7805027.1"
                     /translation="MKEERLDSIEQLAQFLELTAVLSPRVFGGEAERQSYVKRVLSRF
                     NYPHLGRADKGVVKRYLVHVTGYSNQHLTKLIARFVGKQPLGQRKPPVAGFNRRYTDA
                     DILLLAKMDKLHDTPSGQAIKHLLVRAFTVFEDKAFERLSHISVAQIYNLRATDRYQG
                     QRVQWRHTRPSKAVTIGVRKAPKPEGRAGFIRIDSVHQGDHDGIKGVYHINAVDCVTQ
                     WEIVASCEKISEAYLLPVLEEIIESFPFEILGIHADNGAEYINKTVAKLLNKLNIELT
                     KSRPRQSNDNALVEAKNGVVIRKFLGYSHIPQRHAELMNVFHREHFNPYLNYHRACHF
                     PLEVVDKKGKVRKTYPQNRMQTPFEKLSSMPGDLRNLKPGVTLEDLTKYALSMSDNEA
                     ADRMQKARTEMFESINRRRQRASA"
     gene            1885..3186
                     /locus_tag="VIC30_11435"
     CDS             1885..3186
                     /locus_tag="VIC30_11435"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY7805028.1"
                     /translation="MVGSVIPHVTSIETMQDDFYSQFEDQFRSSRSDIKARLSVYHDF
                     LNALKIASDERKALDLGCGRGEWLETLQQFEFDAQGVDVDEGMLEPCRAQGLSVKQAD
                     AIETLKELEDNSVAVISAFHLVEHIPFDQLLELMTQARRALVPGGLLIMETPNPENLS
                     VGTSSFYLDPTHNKPIPHALLAFSTRYCGFGFQKVLRVNEPSNYRDDAQFKLTDVLTG
                     VSPDYAVIAVKTDDQKPPSVYKPLFDRDYGVALETLAQQYDDSRSRISVSERIQTALA
                     ITDEEVFALSCKLDDTADAAQREHELNQHQNESIDHLLTENTRQNETLHRHDGELEHL
                     QSAIQQLQVDMQQNHQMRVNLTNEVLAMQASTSWRITRPLRAVAKTAKSVRQHGLRGF
                     TMPLFEYANTNPSRRAKTAKWLRRFGFRKTAQKLSDSENKQ"
BASE COUNT          782 a          863 c          796 g          806 t
ORIGIN      
        1 aggccgggca tcgagttgtc gttcgaaggg ttgatttgct cagacgccta gcctacgacg
       61 gtccagacgc actaagttat accaagactg aatctcacct catatccgaa gtgagctagt
      121 ctctagaatg tattcaccac cttcgcctac cttggcccat ctgattccgg acttctggtg
      181 cggcatgatc gtactgttta gcagcttatt tctcatgcgt ttagaattag acctgtacct
      241 cgtgggtaga cacactgcca ttatgtgcaa gttgtgcgtt caaacagacc gtctacctct
      301 ctaatatgta gatgcgtctg aggctggtgg ctggtagcct gtgttgatgt gtgcagtcac
      361 cgggcggtgg gtacccgact tttgccgggc tgtgcacatc tgcacaggct tgtcagttgc
      421 tccattcacg cgcttgcgcg ctgtcgtcgt cggttaattg attcaaacat ttcagtccgc
      481 gctttttgca ttcggtctgc ggcttcatta tcgctcatgc tcaaggcata tttggtcaga
      541 tcctccaagg tgacgccagg cttcagatta cgcaggtccc ctggcatgct gctgagtttc
      601 tcgaatggcg tttgcatcct gttttgcggg taggtcttac gcactttgcc ctttttgtcc
      661 actacttcaa gtgggaagtg gcaggctcgg tgatagttca aatacggatt gaagtgctcg
      721 cgatgaaaga cgttcatcag ctcagcatgc cgctgtggga tatggctgta gccaagaaac
      781 ttacggataa ccacaccgtt tttagcttca actagcgcat tgtcattcga ttgcctgggt
      841 ctggacttag tgagctcgat atttagttta ttcagtagct tagccactgt cttgttgatg
      901 tactccgcgc cgttgtcagc atgtatgccc agaatctcga atggaaagga ctcgatgatt
      961 tcctccaaga ctggtagcag ataggcctct gaaatcttct cgcaactagc cacgatctcc
     1021 cattgcgtga cacagtccac ggcattgatg tgataaacgc ccttgatgcc gtcatgatcg
     1081 ccttggtgca cgctgtcaat gcgaataaag cccgcgcgac cctctggctt aggtgccttg
     1141 cgaacgccga ttgtgaccgc tttgctcggg cgcgtgtggc gccattgcac gcgttggccc
     1201 tgataccgat cagtggcgcg aaggttgtag atttgcgcta ccgaaatatg cgacaaccgc
     1261 tcaaaggctt tatcttcaaa gaccgtaaag gctcgcacca ataaatgctt aatggcctga
     1321 ccgcttggcg tatcgtgcag tttgtccatc ttggccagca gcaagatatc ggcatcggtg
     1381 tagcgccgat taaagccagc taccggcggt ttgcgctgtc ccaagggctg tttgccaaca
     1441 aatcgggcga tcagtttggt caagtgctgg ttgctatacc ccgtgacgtg caccagatac
     1501 cgcttgacca ctcctttgtc agcgcggcct aaatgggggt agttaaaccg cgacagcaca
     1561 cgtttgacgt agctctgacg ctcggcttca cccccaaata cgcgcgggct tagcaccgca
     1621 gttagttcca gaaactgggc caattgctcg atactgtcga gcctttcttc tttcatgtcg
     1681 atcactattt ggtaatgatc gacgacaaat gacaaggcgc ttcagacgca tctcatgtta
     1741 gaaacacgag gcaccctcta gacgcatctc atgttggact aggctattct tagacgacta
     1801 atgtgttcct gtagtacgat caatacgcgc ccaataaaga tccgccagac gtagattaca
     1861 aaaaagtatt aacaccttat ttggatggtc ggatcagtta ttccccacgt tacttcaatc
     1921 gaaaccatgc aagacgattt ctatagccaa tttgaggacc agttccgatc ttcgcgttca
     1981 gatatcaagg ctcgccttag cgtctaccac gacttcctca atgcgctaaa aattgcatcg
     2041 gatgaacgta aagccttgga tttgggttgt ggccgcggtg aatggctaga aaccttgcag
     2101 caattcgagt tcgatgcaca aggcgttgat gtcgacgaag gcatgcttga gccctgtcga
     2161 gcacaagggc tttcggtcaa acaagccgac gccatcgaga cactaaaaga attggaagac
     2221 aacagtgtcg ctgtcatatc ggcatttcac cttgtcgaac acattccgtt tgatcaattg
     2281 ttggagctaa tgacgcaagc ccgtcgggcc ttggtgcccg gggggcttct cattatggag
     2341 actcccaatc ctgaaaacct gtcagttggc acgtcgagct tttatctaga tcccacccac
     2401 aacaaaccga tcccgcatgc gctcttggcg ttttcaacac gctactgcgg gtttggtttt
     2461 caaaaggtct tgcgtgtcaa cgaaccatct aattaccgcg atgacgctca gttcaaatta
     2521 acggatgtac tcacaggagt tagccctgac tatgcagtca tcgcagtaaa aacagatgat
     2581 caaaaaccgc cgtcggttta caaaccccta ttcgatcgtg actacggtgt agcactcgag
     2641 acactcgccc aacaatacga cgactctaga tcgcgtatct ctgtgagcga acggattcaa
     2701 accgcgttag ccatcaccga tgaagaagta tttgcactat cttgcaagct tgacgacacc
     2761 gcagatgctg cgcagcgcga acatgagcta aaccaacacc aaaacgagtc catcgatcac
     2821 ttgctcaccg aaaacacccg gcaaaacgaa acactgcatc gtcacgatgg cgagttggag
     2881 catctacagt cagcgatcca acagttacaa gtagacatgc agcaaaacca tcagatgcgc
     2941 gtgaacttaa ccaacgaagt tctggccatg caggcgagca catcctggcg gatcacacgg
     3001 cccttacgcg ctgtggccaa gacggccaaa tccgttagac aacacggcct gcgtggattc
     3061 acgatgcctc tgtttgaata tgccaacacc aacccgagcc gtcgtgcaaa gaccgcaaaa
     3121 tggctcaggc gattcggctt tcgtaaaacc gcacagaagc taagcgactc ggaaaataaa
     3181 caatgatagc gatgtgtcat gcacgcgccc gcgcgtcagc tggagtggag tcaggctgct
     3241 ccgttag
//
LOCUS       DATBNL010000676         2664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_57823, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000676 DATBNL010000000
VERSION     DATBNL010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57823"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..938)
                     /gene="phoU"
                     /locus_tag="VIC30_11440"
     CDS             complement(213..938)
                     /gene="phoU"
                     /locus_tag="VIC30_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEY7805029.1"
                     /translation="MTEHTTKQFDVDIDQIRSELLRMGGVVQSMVRDAMLVVADGDVA
                     ALERVRDNEKLVNKLEVDIDERITNLIALRQPAAVDLRIVLAVSKMLTDMERCGDEAE
                     NIARRANRVHEDSKRFMPDLELQHMARVVLAMLNDVMDSFARHDSVKAAEVVRHDKQV
                     DKEWKSAVRGLVSYMIEDPRTISGGIDLLFVARSLERIGDHCKNMSERVIFMVHGADV
                     RHQGVKAAERLVREETQGGDQEG"
     gene            complement(1029..1697)
                     /gene="rpiA"
                     /locus_tag="VIC30_11445"
     CDS             complement(1029..1697)
                     /gene="rpiA"
                     /locus_tag="VIC30_11445"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018914443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEY7805030.1"
                     /translation="MSDALKQAAAAAAIEYIDPWLTPDAVIGVGTGSTADLFIDLLCQ
                     KRERFKAAVASSERTAARLRAGGVDVLELNDVESMPVYVDGADEINAAGEMIKGGGGA
                     LTREKIVASVAERFVCIVDASKCVQVLGRFPLPIEVIPMAVSEICRKCRALGGTPVVR
                     EGFTTDNGNPIIDVSGLKIEQAAALESQINQWPGVVTNGLFAMGKAQVALVASAAGVS
                     QFNY"
     gene            complement(1694..>2664)
                     /gene="rmuC"
                     /locus_tag="VIC30_11450"
     CDS             complement(1694..>2664)
                     /gene="rmuC"
                     /locus_tag="VIC30_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEY7805031.1"
                     /translation="EKLHATLEQRLGESFKQVSDRLEAVHKGLGEMQTLAAGVGDLKR
                     VLTNVKSRGTWGEVQLARLIEDTMTADQYAQNVKPIPNSDAIVEFAIKLPGREGVDGP
                     VWLPIDAKFPKEEYERLHQAQEDADREAVKQASVALGRAVETQARQIASKYVAPPHTT
                     DFAIMFLPSEALYAEVLRVPGLLDRLQGIRVNIAGPANLAAMLNSLQMGFRTLAIEQR
                     SSEVWQLLRAVKTEFGKFGQSLADVKKSLETATTRLGKTETRTRVMLRNLKSVEALPA
                     NAASALLPDDAASETDQIADPTFDQTPDQTPDQTSEPKHPPEDRSS"
BASE COUNT          616 a          783 c          653 g          612 t
ORIGIN      
        1 taagagcaaa tggagaagtt tctctttgaa gatcaggacg tagaagcaca aggctacgtg
       61 ccaccctcag catagactgg cgttggtgta gtggttaaca cctcgctgac tcgcccaccc
      121 ctttcactga cccaccctaa aaacaaaagc cctgcatcgc cgatgcaggg cttttgtttc
      181 gtctggataa gcgtattcag ggcaaattta gcctagccct cttgatcacc accctgagtc
      241 tcttcgcgaa ccaaacgctc ggctgctttg acgccctggt ggcgcacgtc agcgccgtgc
      301 accataaata tcacgcgctc ggacatgttc ttgcaatggt caccgatacg ctcgagcgag
      361 cgggccacga acaacagatc gataccgcca gaaatggtac gtggatcttc gatcatgtag
      421 gaaaccagtc cgcgcacagc cgacttccac tctttgtcga cttgcttgtc gtggcgcacc
      481 acttcggcag ccttaaccga atcatgacgc gcaaaactat ccatcacatc atttagcatt
      541 gccagcacca cacgtgccat gtgctgcaat tcaagatcgg gcataaagcg cttgctgtct
      601 tcatgaacgc gattggctcg acgcgcaatg ttctcggcct catcaccaca gcgctccatg
      661 tcagtgagca tcttcgacac cgccaagaca atacgtaggt caacggcagc cggctggcga
      721 agagcaatta ggttggtgat gcgctcatca atgtcgacct caagcttgtt gaccagtttc
      781 tcgttgtcac gcacccgctc aagtgcagcc acatcgccat cagcgactac cagcatagcg
      841 tcacggacca tggattgaac cacgccaccc atgcgcagca gctcactacg gatctggtct
      901 atatctacat cgaactgctt ggtcgtgtgc tcggtcatgg cggatacgca cctgaaaaag
      961 gttaaacaac tacgatgata cttcttaact gatgagagtc taagacggaa atatgacagt
     1021 tttgtgaact agtagttgaa ctggctaaca ccggcagcac tggccacaag cgcaacttgc
     1081 gctttaccca tggcgaacaa gccattggtc accacaccag gccattgatt tatctgggac
     1141 tcgagcgcgg cggcttgctc gattttaaga ccagagacat cgatgatcgg attgccattg
     1201 tctgtcgtga agccctcacg caccacgggc gtgcctccta gagcacgaca cttgcggcag
     1261 atctcactga ctgccatcgg gatcacttca atgggcaatg ggaagcgtcc tagcacctgc
     1321 acacacttgg atgcatcaac aatacacaca aaccgttcgg ctaccgaggc cacgattttt
     1381 tcgcgtgtca aggcaccgcc gccgcctttg atcatttctc cagcagcgtt gatttcatcg
     1441 gcaccgtcaa catacacggg catcgattca acgtcgttga gctcgagcac gtccacacca
     1501 ccggcacgca gtcgggcagc ggttctttca gagcttgcca ctgccgcttt aaaacgctca
     1561 cgcttctgac acaatagatc gataaacaaa tcggcagtag accccgtgcc cacgccaatc
     1621 acagcatctg gggtcaacca agggtctatg tactcaatgg cggcagccgc agcggcctgc
     1681 tttaatgcat cgctcatgaa gatctatcct cgggtgggtg cttaggttct gatgtttggt
     1741 caggggtttg gtcaggggtt tggtcaaaag ttgggtcggc tatttgatcg gtttcagatg
     1801 ccgcatcatc gggcaatagt gcactcgctg cattagccgg tagcgcctca acacttttaa
     1861 ggttacgcaa catcacacgc gtgcgcgtct cggttttacc caaacgcgtt gtggcagttt
     1921 ccagtgactt tttaacatca gccagtgact gtccaaactt accaaattcc gtttttaccg
     1981 cgcgtagcag ttgccagacc tcagatgatc gctgctcaat agccagggtt ctgaaaccca
     2041 tttgcaagct attgagcatg gcagccaagt tcgctggtcc tgcaatgttg acgcgtattc
     2101 cctgcaaccg gtcaagcaaa ccgggcacgc gcaacacctc ggcatacagg gcttcactgg
     2161 gcaagaacat gatggcaaag tccgtggtgt gtggtggcgc gacatatttg ctggcaattt
     2221 gccgggcttg cgtctcgact gcccgcccaa gcgccacaga ggcctgtttg acggcctcgc
     2281 gatcagcgtc ttcttgcgcc tggtgcaaac gctcgtactc ttctttcggg aacttggcat
     2341 cgatgggcag ccacacagga ccatcaacgc cttcgcgacc cggtaactta atagcaaact
     2401 cgacgatggc gtcactatta gggatcggtt tgacgttttg tgcgtactgg tccgccgtca
     2461 tggtgtcttc aatcagacgc gcaagctgca cctcacccca agtaccacgc gatttcacat
     2521 tggtgagcac ccgctttaaa tcacccacac cggcagccaa ggtctgcatc tcgcccaagc
     2581 ctttgtgtac ggcctctaag cggtctgaaa cctgtttaaa cgactcccct agccgctgct
     2641 caagcgtggc atgcaacttc tcat
//
LOCUS       DATBNL010000677         2307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_196819, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000677 DATBNL010000000
VERSION     DATBNL010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196819"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..348
                     /locus_tag="VIC30_11455"
                     /pseudo
     CDS             44..348
                     /locus_tag="VIC30_11455"
                     /inference="COORDINATES: protein motif:HMM:NF040375.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
     gene            362..643
                     /locus_tag="VIC30_11460"
     CDS             362..643
                     /locus_tag="VIC30_11460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805032.1"
                     /translation="MAFSKDNFQPIGGQSKAGNAPQMWSYTAPGTDALADINTEGYFN
                     AVADLLKVGDLIYVSDTSVPTASLVVVLSNTGTVVDVSDGTAIAVTDAD"
     gene            691..1308
                     /locus_tag="VIC30_11465"
     CDS             691..1308
                     /locus_tag="VIC30_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805033.1"
                     /translation="MASGDTKLSICSDALILLGATPLSSFSDGTDAAQICDRLYDDLK
                     DSVVASYPWSWSFKKVQLARLTEEPANEWKYFYQLPGDRLAGVRAVFNSSATGIAPIQ
                     RGWELLGDKLMSSQEQIWIDYQFSPGESALPTYFVQLLKYAMAAEIAETVTDQLTKAE
                     YFERKAFGSPDENRRGGYFRVASNIDGSSKSIERMEDYSLIAVRQ"
     gene            1305..>2307
                     /locus_tag="VIC30_11470"
     CDS             1305..>2307
                     /locus_tag="VIC30_11470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805034.1"
                     /translation="MSRVIQVQTNFTSGELDPKLRARIDLQQYYNGLETAQNIVIQPQ
                     GGFVRRDGSKYLTTLPASAADGARFVHFEFSVDDSYMLLFVDQRMYVFKDGVQITDIN
                     GSGNDYLAVTKITDTVIPTMCWAQSADTLIIAQQSMIPQRIVRGATDASWTISDLAFD
                     FIPKFAYTLTVTQPAATLTPDAEDGKVTLTAGSSVFSAGNVNQYIEASPQGRARIVEF
                     VSGTVVKAITEVPFFDTTAIASGDWDLEAGYEDTWSTTRGWPRAAVFYEGRLYFGGAS
                     SRPTTLWGSRVGQFFNFDPGESFDDAALEATLDTGRFNAIIDLYAGRNLQIFTTGGEF
                     "
BASE COUNT          551 a          580 c          604 g          572 t
ORIGIN      
        1 gatccacgca aacagcttgt cttctttgct gggtgagact gaggtgactt cagctgactt
       61 caacacagtt cgtgctttgg tcactggcga catcaatacg ttcatgggct tccgtttttc
      121 actttcggtg atcgtgacga aggcggtctg ccaatcgacg gttctaacga tcgtactctg
      181 tacgcgttcc atcgtgatgc ggttggcctc ggtatcggca tgaaccaaac ttcacgcgtt
      241 gactacatcc cagagaagac ttcattcctg gttgcgtcaa tgttctcagc tggtgcggta
      301 gcgatcgatg acgaaggtat cgtcaagatc acttgccgtg aagcataagg aggaatgaca
      361 aatggcattt tctaaagaca acttccagcc aatcggcggt cagtctaaag caggtaatgc
      421 accacaaatg tggtcataca ctgcacctgg cactgacgcc ctggcagaca tcaacacaga
      481 aggctacttc aatgctgtag ctgacttgtt gaaagttggc gacctgatct atgtgtctga
      541 cacaagcgta ccaaccgcat ctttggttgt tgtgttgtcc aacactggaa cagtagttga
      601 cgtgtctgac ggaacagcaa tcgctgtaac agacgctgac taaacgaatc ggctcccctc
      661 cgggggagcc ttttctattg aggtgacgca atggcatccg gtgatactaa gctgtccatc
      721 tgttcggacg cactaattct cttgggggct acgcctcttt cgtcgttttc ggacggcact
      781 gacgcggcgc agatctgcga ccgcctctat gatgacctga aagattcggt cgtcgcatct
      841 tatccatggt cctggtcgtt caagaaagtg caacttgcac gcttgactga agaaccggct
      901 aatgaatgga agtattttta ccagctgcca ggtgatcggc tggctggtgt gcgcgctgta
      961 ttcaactcga gcgcgacagg aatcgcacct atccaaagag gatgggagct gctgggcgac
     1021 aaactcatgt ctagccaaga gcaaatctgg atcgactatc agttttcgcc aggcgaatct
     1081 gcgctgccaa catactttgt gcagctgctg aaatatgcaa tggctgcaga gatcgctgaa
     1141 accgtgacgg atcagctgac caaggcagaa tattttgagc gcaaggcgtt cggcagccca
     1201 gacgagaacc gccgcggtgg ttactttcga gtcgcaagta acatcgatgg ctcgagcaag
     1261 tcgatcgagc gcatggaaga ctactcgctt atcgcggtga gacaatgagc cgtgtcattc
     1321 aggtgcaaac aaactttacg tctggcgagc tagacccaaa gctgcgtgcg cgtattgatc
     1381 tgcagcagta ttacaacgga ctcgagactg cacagaacat tgtgatccag ccccagggcg
     1441 gctttgttcg gcgtgatggt tcaaaatatc ttacaacatt gccagcatcc gcagcggatg
     1501 gcgcacgttt tgtacacttt gaattttcag ttgacgacag ctacatgctt ttatttgtcg
     1561 atcaacgcat gtatgtattt aaagacggtg tgcaaattac agacattaac ggatccggta
     1621 atgactattt agcggtgacc aagattaccg acacagtgat tccaacaatg tgctgggcgc
     1681 agtcagctga tacattgatt attgcccagc aaagcatgat tccacagcgc atcgtgcgcg
     1741 gagccacaga cgcgtcgtgg acaatttctg acctagcgtt cgactttatt cccaagttcg
     1801 catacacgct aactgttacg cagcccgcag ccactctgac gcctgacgct gaagacggca
     1861 aggtcacgct gacagctgga tcttctgtgt ttagcgccgg caacgtaaat cagtatatcg
     1921 aagcatcgcc ccagggccgc gctcggattg ttgaatttgt atccggcaca gttgttaagg
     1981 caattactga ggtgccattc tttgacacga cagccatcgc ttctggtgat tgggaccttg
     2041 aggcgggata cgaagacacc tggtcaacca cgcgcggctg gcctcgagca gcagtatttt
     2101 acgaagggcg tttatacttt ggcggcgcat catcacggcc tactacattg tggggcagcc
     2161 gggtaggtca gttctttaac tttgatccag gcgaatcatt cgatgatgct gcgctcgagg
     2221 cgactcttga taccgggcgg tttaacgcca tcatcgatct atacgcagga cgtaatttac
     2281 agatctttac cactggcggt gagttct
//
LOCUS       DATBNL010000678         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_88070, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000678 DATBNL010000000
VERSION     DATBNL010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88070"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VIC30_11475"
     CDS             complement(<1..352)
                     /locus_tag="VIC30_11475"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY7805035.1"
                     /translation="MKLHVLSDLHLEFTHWQPPATDADVVVLAGDIAVGVDGLRWAAT
                     QFGDKPIIYVAGNHEYYGGKFDAVLDELSQVSAELGIYFLENSEVLLTDRTGDKVRFL
                     GCTLWTDFLLFGPAM"
     gene            complement(608..1510)
                     /locus_tag="VIC30_11480"
     CDS             complement(608..1510)
                     /locus_tag="VIC30_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY7805036.1"
                     /translation="MDRIDAIQAFVAVVDAGSFVAAADKLSLSKAVVSRQIAWLEEQL
                     GTRLLHRTTRRVSLTSDGDLFLGRSRELLQHWQDATDEVSHRTLQARGTLRLNVPFSY
                     GVMRLAALWPVFMQQHPDVLLDITLSDRVIDLVDEGYDLAVRIGQLPSSSLISRRLAS
                     MRLKVCASPAYLKAHGNPNLPTDLAAHHVVSYSLLSSGDSWTLSTKADPKRRQTVEVV
                     PVMQSNNGDTCTAAAIAGRGVVLQPDFMVQEHLDTGALVELLPAWQADEFGIYAVYPS
                     RRFLPAKVRLMIDFLSSQLSVPVN"
     gene            1615..>1736
                     /locus_tag="VIC30_11485"
     CDS             1615..>1736
                     /locus_tag="VIC30_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011464859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HEY7805037.1"
                     /translation="MPASLNHLLVLIGRLALAALFLPAGLSKVTGFAGTVGYIES"
BASE COUNT          449 a          481 c          416 g          390 t
ORIGIN      
        1 gcatggccgg tccaaacaac aaaaagtctg tccaaagtgt gcaaccgagg aatcgaacct
       61 tatcacctgt gcgatccgtg agtagcacct ccgagttctc aagaaagtag atgccaagct
      121 cagccgacac ctggctcaac tcatctaata cagcatcaaa cttgccgccg taatactcgt
      181 ggttgccagc tacatagatg attggtttat ccccgaattg cgtcgccgcc caacgcaaac
      241 cgtccacgcc cacggcaatg tcacccgcta acaccacaac atctgcgtcg gttgctggcg
      301 gctgccaatg cgtgaattcc aaatgcaaat cgcttaagac gtgtagcttc atgaaacctt
      361 gccattctaa tgatgcgtgt aggaaagcct aaattgtagg agtgggtaaa tgccaaggat
      421 ccggtttaga actgccacta gcgaacattc ttcacactcg ggtttacacc gaacacccct
      481 acaccaacac ggtgacgtgt gataggtgtt tgccgaaaca cagcccaatg cgtaccgcaa
      541 aacgaccccc acgatgaccg ctcggtgcag gtgatttttg agtgactgtc ttaagaaatt
      601 ctcttactta attgaccggc accgacaatt gggatgacag gaaatcgatc atgagtctga
      661 ctttggccgg caaaaaccgc cgtgaagggt aaacggcata aataccaaac tcatcagcct
      721 gccaagcagg caacagctca acgagtgcgc cggtatctaa gtgttcttgc accatgaaat
      781 ctggctgcaa gacaacgcca cggccagcaa tggctgctgc cgtgcatgtg tcgccgttgt
      841 tgctttgcat aacgggcacc acttcgacgg tctgacgccg ctttggatcg gccttggtcg
      901 acagggtcca gctgtcacca ctagacagaa gactatacga aacgacgtga tgcgcagcta
      961 gatcagttgg caggtttgga ttgccgtgcg ccttcaaata ggctggtgat gcacacacct
     1021 tcaagcgcat actggctaag cgacgactga tcagtgatga tgaaggcaat tggccaatac
     1081 gcaccgctag gtcgtagcct tcatcgacca aatcaatcac ccgatcggat agcgtgatgt
     1141 ccagaagcac atcaggatgt tgttgcatga atactggcca aagggcagcc aaacgcatca
     1201 caccgtaact aaagggtaca ttcaaccgaa gggtgccgcg cgcttgcaaa gtgcgatgac
     1261 tgacctcgtc agtcgcatct tgccaatgct gcaaaagctc ccggctacgc cccagaaaca
     1321 ggtccccgtc ggaggtgagc gacacccgcc gcgtggttcg gtgcagcaaa cgggtgccta
     1381 gctgctcctc aagccatgca atctggcgtg acacgaccgc tttagagagc gagagtttgt
     1441 cagcggctgc cacgaagctg cccgcatcaa ccacggccac aaaggcctgt atggcatcaa
     1501 ttcgatccat tgtttctact taaaatacaa tttgtttatt tttatcacat ttattcctat
     1561 tttaggaact gtcacaatgc tgctactgaa acactaaatc acttggagtt acacatgccc
     1621 gcctcactta atcatttgtt agttctcatt ggacgcttgg cattggccgc cctgttcctg
     1681 ccagctggcc tgtctaaagt cactggcttc gcaggcacag ttggctatat cgaatc
//
LOCUS       DATBNL010000679         2269 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_177047, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000679 DATBNL010000000
VERSION     DATBNL010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177047"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2269)
                     /locus_tag="VIC30_11490"
     CDS             complement(<1..>2269)
                     /locus_tag="VIC30_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEY7805038.1"
                     /translation="YSLIRRNGAVVGFEPSKIAIAMTKAFLAVNGGQGAASARVREMV
                     EQLTHQVVNALVRGRPNGGTFHIEDVQDAVELALMRSGEHDVARAYVLYRERRSQERA
                     AERASTGEPAAPAEHTFNITDNGVTKPLDVAKLKATIEAAGEGLTEFVDTDLILKETL
                     KNLYEGVQIEEVYKSAILASRVLVEKDPAYSRATARLLLHSIRKEALGEEVSQDGMIK
                     EYANYFPKFIKKGIEGGLLNPELGQYDLKRLAKALDAKRDLQFDYLGLQTLYDRYFLH
                     LKGQRIELPQVFFMRVAMGLALREIDRETRAIEFYEILSSFDFMSSTPTLFNSGTLHS
                     QLSSCYLTTVADDLDGIYEAIKENALLAKYAGGLGNDWTPVRAMRSHIKGTNGESQGV
                     VPFLKVVNDTAVAVNQGGKRKGAVCCYLETWHLDIEEFLELRKNTGDERRRTHDMNSA
                     NWIPDLFMKRVMEGGDWTLFSPSDCPDLHDKFGADFEKAYVAYEEKAARGELTLFKKM
                     PALNLWRRILSMLFETGHPWITFKDPCNVRSPQQHAGVVHSSNLCTEITLNTNDSEIA
                     VCNLGSINLVAHLKDNGQGGHELDHDKLQRTVKTAMRMLDNVIDINYYAVDKARNSNL
                     RHRPVGMGIMGFQDCLHVMRVPYASQEAVEFSDRSMEAVCYYAYGASSDLAAERGRYE
                     SYDGSLWSRGILPQDTLDLLREQRGGYVEVDQSSTMDWDSLRARIKQQGMRNSNCVAI
                     APTATISNIIGVSACI"
BASE COUNT          508 a          620 c          595 g          546 t
ORIGIN      
        1 gatgcacgct gatacaccga tgatattgga aattgtcgcg gttggggcga ttgcaacgca
       61 atttgagtta cgcataccct gctgtttgat gcgcgcacgc aacgaatccc aatccatcgt
      121 gcttgattga tcaacttcaa cgtatccacc acgttgttca cgcaacagat caagtgtgtc
      181 ttgcggcaag atgccacgtg accaaagtga accgtcgtag ctttcgtaac gaccacgttc
      241 ggcagccaaa tcacttgatg cgccgtaggc gtaataacaa acggcttcca tcgagcgatc
      301 agaaaactca actgcttctt gcgaggcgta cggcacgcgc atgacatgca agcaatcctg
      361 aaagcccatg atgcccatgc ctactggacg atgacgcagg tttgagttgc gtgccttatc
      421 aacggcgtag tagttgatgt cgatgacgtt atcgagcatg cgcatcgccg tcttgacggt
      481 tctttgcagc ttgtcgtggt caagctcatg accaccttgg ccgttgtctt ttaagtgcgc
      541 gaccaagttg atagatccga ggttgcacac agcgatctca gaatcgttgg tgtttagcgt
      601 gatctcggtg cacagattcg agctatgtac gacaccagca tgttgctgag gtgaacgcac
      661 gttgcaaggg tctttgaagg tgatccatgg atggcctgtt tcaaacagca tcgacaggat
      721 gcggcgccac aggttcaatg ctggcatctt cttgaataga gtcaactcac cgcgtgcagc
      781 tttctcttcg taggccacat aggctttctc aaagtcagca ccaaacttgt cgtgcaagtc
      841 agggcagtca gacggtgaga acagcgtcca gtcgccacct tccataacgc gcttcatgaa
      901 caggtccgga atccagttgg cgctattcat gtcgtgggtg cgacgacgct catcaccggt
      961 gttcttgcgc agttccagaa actcttcgat gtcgaggtgc cacgtctcaa gatagcaaca
     1021 taccgcccct ttgcgtttgc cgccttggtt cacggccaca gccgtgtcgt tgaccacttt
     1081 caaaaatggc accacgccct ggctttcgcc attggtaccc ttgatgtggc tacgcatggc
     1141 acgcactggc gtccaatcgt tgcccaaacc gccggcgtac ttagccaaca gcgcgttctc
     1201 tttgatcgct tcgtaaatgc catcgagatc gtcagcgacc gtcgtcaggt agcaagaaga
     1261 aagctgtgag tgcagcgtgc ctgagttaaa caacgttggt gttgagctca taaaatcaaa
     1321 gctcgacaag atttcataga actcgatggc gcgtgtctcg cggtcaatct cgcgcaaggc
     1381 cagccccatg gccacacgca tgaaaaacac ctgcggcaac tcgatgcgct ggcccttcag
     1441 gtgcaggaag tagcggtcat agagtgtttg cagaccgaga taatcaaact gcaggtcacg
     1501 cttggcatcc aatgccttgg ctagccgctt gaggtcatac tgacccagtt cagggttcag
     1561 cagaccgcct tcaatgccct ttttgatgaa cttggggaag taattggcat actccttgat
     1621 catgccgtct tgcgagactt cttcaccgag tgcttctttg cgaatgctgt gcaggagcaa
     1681 acgggcagtg gctcggctgt atgctggatc tttttccaca agcacacgtg aagccaaaat
     1741 cgcggactta tagacctctt cgatctgcac accctcgtac aggtttttca gggtctcttt
     1801 cagaatcagg tctgtatcaa cgaattctgt caggccttca ccggccgctt caatggtggc
     1861 cttcagtttg gccacatcga gcggcttggt gacgccgtta tcggtaatgt taaaggtgtg
     1921 ctcggcaggc gctgctggtt caccggtgct cgcgcgttca gcggcccgtt cttgcgagcg
     1981 acgctcgcga tacaaaacgt aggcgcgtgc cacgtcgtgt tcgcctgaac gcatcaaggc
     2041 gagttcaaca gcgtcttgca catcttcgat atgaaacgta ccgccgttag gacggccgcg
     2101 taccaaggca ttaacaactt ggtgcgttaa ctgctcaacc atctcgcgta cacgtgccga
     2161 ggctgcgcct tggccgccgt tgaccgcgag aaatgctttg gtcatggcaa tggcgatttt
     2221 gctcggctca aaaccgacga ccgcaccatt gcggcgaatc aaactgtaa
//
LOCUS       DATBNL010000680         3446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117398, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000680 DATBNL010000000
VERSION     DATBNL010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117398"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1138)
                     /locus_tag="VIC30_11495"
     CDS             complement(<1..1138)
                     /locus_tag="VIC30_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006482929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY7805039.1"
                     /translation="MSRKTPIERYRNIGISAHIDAGKTTTTERILFYTGINHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWRGMGNNFPEHRINVIDTPGHVDFTIEVERS
                     MRVLDGACMVYCAVGGVQPQSETVWRQANKYGVPRLAFVNKMDRTGANFFKVYDQLKL
                     RLKANPVPIVLPIGAEENFKGVIDLVKMKAIIWDEASHGAKFDYVDIPSELEAQAQEW
                     REKLLETAAESSEDLMNKYLESGELSEEEIVTALRARTIANEIQPMLCGTAFKNKGVQ
                     RMLDAVIELLPSPIDIPPVQGELDDGTETSRKAEDTEKFSALAFKLMTDPYVGQLTFV
                     RVYSGVLKSGDTVYNPIKGKKERIGRILQMHANNREEIKEVVAGD"
     gene            complement(1157..1627)
                     /gene="rpsG"
                     /locus_tag="VIC30_11500"
     CDS             complement(1157..1627)
                     /gene="rpsG"
                     /locus_tag="VIC30_11500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008649176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEY7805040.1"
                     /translation="MPRRREVPKRDILPDPKFGSVELAKFMNVVMLSGKKAVAERLVY
                     GAFDQIQSKAGKDPLEVFETAINNVKPMVEVKSRRVGGANYQVPVEVRPVRRLALAMR
                     WVREAAKKRGEKSMDLRLAGELLDAAEGRGAAMKKREDTHKMAEANKAFSHFRW"
     gene            complement(1824..2201)
                     /gene="rpsL"
                     /locus_tag="VIC30_11505"
     CDS             complement(1824..2201)
                     /gene="rpsL"
                     /locus_tag="VIC30_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009548400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEY7805041.1"
                     /translation="MPTINQLVRKPRAVAVAKSKSPALEECPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNGYEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSL
                     DLQGVKDRKQARSKYGAKRPKKA"
     gene            complement(2529..>3446)
                     /locus_tag="VIC30_11510"
     CDS             complement(2529..>3446)
                     /locus_tag="VIC30_11510"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392084.1"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates. Subunit beta'
                     binds to sigma factor allowing it to bind to the -10
                     region of the promoter; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY7805042.1"
                     /translation="TVSIGEVLARIPQESQKTRDITGGLPRVAELFEARSPKDAGMLA
                     EVTGTVSFGKDTKGKQRLVITDLDGVSHEFLISKDKQVLVHDGQVVNKGEVIVDGPAD
                     PHDILRLKGIERLATYVVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVLIMDAGDTTF
                     IPGEQVERSELLNENDRVMAEDKLPATYENVLLGITKASLSTDSFISAASFQETTRVL
                     TEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHDARRDKEVIEAAEREAARALANPF
                     EDAPETITEGGEESQTPSNDVDGESAGEQ"
BASE COUNT          841 a          961 c          789 g          855 t
ORIGIN      
        1 tgtcacctgc aaccacttct ttgatttctt cgcggttatt ggcgtgcatc tgcaagatac
       61 gaccaatacg ctctttcttg cctttgattg ggttgtaaac ggtatcgcca gacttgagga
      121 cacccgaata aacgcgtaca aaagtcaatt gtccaacgta cggatctgtc attagcttaa
      181 aggccaatgc cgagaacttc tccgtgtctt cagctttgcg gctggtttcg gtgccatcgt
      241 ctagctcacc ctgaactggc gggatatcaa ttggcgacgg gagtagctca ataacagcat
      301 ccaacatacg ctgcacgccc ttattcttga aggcagtgcc acatagcatc ggctgaattt
      361 cgttggcaat ggtgcgtgca cgcagtgccg ttacgatttc ctcttccgac agctcgcctg
      421 attcgagata cttgttcatc aagtcttcag aagactcagc tgcggtttcg agtagttttt
      481 cgcgccactc ctgagcttgg gcctcaagct cggaaggaat gtcaacgtaa tcgaacttag
      541 caccgtgact agcctcgtcc cagatgatgg ctttcatctt cacaagatcg atcacaccct
      601 tgaagttctc ttcggcacca ataggcaaaa caataggaac agggttggct ttcaaacgca
      661 gcttgagctg gtcataaacc ttgaagaaat ttgcacctgt gcgatccatt ttgttcacga
      721 aggctaaacg aggcaccccg tacttgtttg cttgacgcca taccgtctca gactgtggct
      781 gcacaccacc aaccgcacaa taaaccatgc aagcaccgtc gagcacgcgc atagaacgtt
      841 cgacttcaat ggtgaagtcc acgtgacccg gggtgtcgat tacgttaatg cggtgctctg
      901 gaaaattatt acccatgcct cgccagaacg cagtcgtcgc agcagaagta atagtgatac
      961 cgcgctcctg ctcttgctcc atccagtcca tggtagccgc accatcgtgg acttcaccaa
     1021 tcttgtggtt gatgccggta tagaacagaa ttcgctcagt agtggtggtc tttccagcgt
     1081 caatgtgagc ggaaataccg atattgcgat agcgctcgat cggggttttg cgagacatga
     1141 tgatgacttc ctaaaattac cagcggaaat gactgaaggc tttgttcgct tcagccatct
     1201 tgtgcgtgtc ttcacgcttt ttcattgcag cgccacggcc ctcggctgca tcaagcaact
     1261 caccagccag gcgcaaatcc atggacttct caccgcgctt tttcgcggct tcacgcaccc
     1321 aacgcattgc aagtgctaaa cggcgtacgg ggcggacttc aacgggcacc tgatagttgg
     1381 cgccaccaac tcggcggctc ttgacttcaa ccatgggctt cacgttattg atcgctgtct
     1441 cgaacacctc gaggggatcc ttgccggcct tggactggat ctggtcaaac gcaccataga
     1501 ccagtctctc agcgacagct ttctttccag aaagcatcac aacgttcatg aattttgcga
     1561 gctcaacact gccaaacttt gggtcgggca gaatgtcacg ttttggtact tcgcgacgac
     1621 ggggcatact atttcctttg tgtcagttca gttggatatc gattaagtag cttgcgatat
     1681 ccgcggccta tcagacaatg agacgacgac cacttacgtt cccgggcaat tccggttgca
     1741 catggttggc taaccattta agttagacca aacatttcgt tttactgcac gattactaca
     1801 cattcactac aaaaacaggc tgcttaagcc ttcttcggac gcttagcacc atatttagaa
     1861 cgcgcttgct tacgatcttt aacgccttgc aagtcaagcg aaccacgaac gatgtggtag
     1921 cgcacacctg gcaaatcctt gactcggccg ccacgaacta gcaccactga gtgctcttgc
     1981 aagttgtggc cttcaccgcc aatgtatgaa atcacttcat agccattggt caagcgaacc
     2041 ttcgcaactt tacgcagtgc tgagttaggc tttttagggg tcgtggtgta gacacgggta
     2101 cacacaccac ggcgctgtgg gcactcttcc aaagcagggc ttttgctttt agcaactgca
     2161 acggcgcgtg gtttacgcac gagctggtta atagttggca tacttctttc ctatagagcc
     2221 acatgcatac gagcttgcgg cagttcttaa tccaatggcg ggccataacg acgcatgtgc
     2281 ccaccccaga cggagaaccg taaaagagca gacatgccaa atatctatcg gtttggcccg
     2341 gctaaaccga tacaaaaaca tcaatcccga taatgatcta acgggaaaca cacgaggctt
     2401 tacaaaacaa ctagcaaaac cacttactcg acagagcccg agaggttata acacccacga
     2461 ccgtttgtca aattttctat tcaatcaaat caagcagagc gcaagcgaac tcgcaccctg
     2521 ctgacccttt attgctcgcc tgcggactca ccgtcgacgt catttgacgg tgtttgcgat
     2581 tcctcaccac cttcggtgat agtttccggc gcatcttcaa acggattagc caatgcacga
     2641 gctgcttcac gctccgccgc ttcaatcacc tctttgtcgc gacgtgcatc gtgataagcc
     2701 attcctgtgc cagcagggat taggcgtcca acgattacgt tttctttcag acctcgcaac
     2761 tcgtcgcgtt tacccatgat ggcagcctcg gtgagaaccc gggttgtctc ctggaacgaa
     2821 gcggccgaga taaacgagtc tgtcgacaga gatgccttgg taatacccaa aagaacattc
     2881 tcgtacgtcg caggcaactt gtcttctgcc atgacacgat cattctcatt gagcaactca
     2941 gaccgttcaa cttgctcacc tggaatgaat gtcgtgtcgc cagcatccat gatcagcaca
     3001 cgacgcaaca tctgtcgaac aattacttcg atgtgcttgt cattgatctt cacaccctgt
     3061 aagcgataga catcctggac ctcatcgaca acatacgtgg ccagacgctc aatacctttt
     3121 aggcgcagaa tatcgtgcgg atcagctggg ccatcaacaa tcacttcacc tttgttgacc
     3181 acctggccgt cgtgcaccag cacttgcttg tctttagaaa tcaagaactc gtgtgaaaca
     3241 ccatcgagat cagtgatgac cagacgctgc ttgcctttgg tgtctttacc gaaggaaacg
     3301 gtaccggtaa cctcagccaa cataccggcg tctttcggtg agcgcgcttc aaacagttca
     3361 gccacccgtg gcaaaccacc agtaatatca cgcgtctttt gagattcctg cggaatacgc
     3421 gcaagcacct caccgatcga cacagt
//
LOCUS       DATBNL010000681         2119 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_17530, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000681 DATBNL010000000
VERSION     DATBNL010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17530"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..427
                     /locus_tag="VIC30_11515"
     CDS             134..427
                     /locus_tag="VIC30_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEY7805043.1"
                     /translation="MVTEIAHLVIKAGQESDFEKSVALAKPHFLSANGCHGVSLARCI
                     EHPEQYQLFVQWETVEHHMVEFRESENFQKWRELASPHFAEPPRVEHIEDVSI"
     gene            complement(449..832)
                     /locus_tag="VIC30_11520"
     CDS             complement(449..832)
                     /locus_tag="VIC30_11520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805044.1"
                     /translation="MRKTIDKTSLIRRLVLRAVLPTRIGIVAALTVFVFSAASSAAST
                     QVLAQSQVESNNNPATESTSQDGAMTPNEILALFEREARAAYVMNKQACDGLDAEEQK
                     ICLARARLQFDEDMRYAQKRAAQGY"
     gene            844..1488
                     /locus_tag="VIC30_11525"
     CDS             844..1488
                     /locus_tag="VIC30_11525"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008341934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY7805045.1"
                     /translation="MFESNFEDTAMSRLKPAPHIKSCASQPPLRAWLLAASVLLASSV
                     FAISPAQAQLAPGAKAPTFSAQAALAGQPFEFDLQAALEQGPTVVYFYPKAFTSGCTV
                     EAQLFAQAMDDFKALNATVVGVSGDDIDTLKKFSEGPCGGKFAVAADPDGEVIDLYDA
                     GFAIIPGMADRISYAIAPDGTILEALESLSPADHVTKSLDAIRVWHDEQAGQGK"
     gene            1485..>2119
                     /locus_tag="VIC30_11530"
     CDS             1485..>2119
                     /locus_tag="VIC30_11530"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEY7805046.1"
                     /translation="MKLVWFRTDLRLDDQPALTSACDQGPALGLYIISPNQWLSHPEA
                     AVKIELWRRLLKDLQPRLARAGVALKLLRIEQWQDVPAAMLAFCLEHGITEVHCNREQ
                     GVYERRRDRATYQLLSEHGIALVGHDGQTLLAPGSLKTGAGATYRVYSPFARACRAHI
                     LQSPLCLTQAPQSCALPTGVDPDDIDVIWPDELPSLADQWPADLDVIHERL"
BASE COUNT          472 a          583 c          542 g          522 t
ORIGIN      
        1 aaatgcccta cccgcgcagc gccatttcca gctaacctac tatacaagcg gtgtgtgcac
       61 gcgagcttgg ttttcttaga gcgctgagcc cccgacacac cgatcttgtc tacaccaacc
      121 tttaaggaca cacatggtta cggaaatcgc tcacctcgtc atcaaagcag gtcaagaaag
      181 cgactttgaa aaaagcgtgg cactggccaa accccatttc ttgtctgcca acggctgtca
      241 cggtgtttct ttagcacgtt gcattgagca ccctgagcag tatcaactat ttgtgcaatg
      301 ggaaacggtt gaacatcaca tggtggagtt tcgcgaaagt gagaactttc aaaaatggcg
      361 agagctagct agcccgcatt tcgccgagcc gcctcgggtt gaacatatcg aagatgtgtc
      421 aatctaagac gtaccaatcc aagacaactc aataaccttg cgcggcccgt ttttgtgcat
      481 accgcatatc ctcgtcaaac tgtaggcgag ctcgggccaa gcaaatcttt tgctcttctg
      541 catcaagtcc gtcacaagct tgtttgttca tgacgtacgc tgccctagcc tcacgttcaa
      601 ataaagccag gatttcgttt ggtgtcatgg ctccgtcttg gcttgtagac tctgttgccg
      661 ggttattgtt tgattcaact tggctctggg ccagtacttg agtacttgca gcactactcg
      721 cagcactaaa gacaaacacc gtcagtgcag ctacgatacc aatacgtgtt ggcaggacag
      781 cgcgcaacac cagacgccgg attagggatg ttttgtctat cgttttacgc atgatctaag
      841 cttatgtttg aatccaactt cgaagatacc gcgatgagcc gattaaaacc agccccccac
      901 atcaaatcct gtgcgtcgca accgccactg cgcgcctggc tgctagcagc tagtgtgttg
      961 ttagctagta gcgtatttgc tatctctcca gcgcaggcac aactcgcgcc tggtgccaaa
     1021 gcacccacgt tcagtgccca agccgcgtta gccggccagc cctttgagtt cgatttgcag
     1081 gccgcgcttg aacaagggcc aactgtggtt tatttctacc ccaaggcctt taccagcggc
     1141 tgcacggttg aggcgcagct ttttgctcaa gcgatggatg atttcaaggc gcttaacgcc
     1201 accgtggttg gtgtgtctgg cgacgatatc gacactctaa aaaaattctc tgaaggaccg
     1261 tgtggtggca aattcgctgt ggccgccgat cccgatggcg aggtgattga tttatatgat
     1321 gccggatttg caattatccc tggcatggct gaccgtatct cgtacgcgat tgcaccagat
     1381 ggcacgatcc ttgaagcact tgaaagcctg agccccgcag atcatgtcac taaatctctg
     1441 gatgccattc gcgtttggca tgatgagcag gcgggtcaag gcaaatgaag ctggtttggt
     1501 ttagaaccga tttacgcctt gatgaccagc ctgcactgac cagcgcttgt gatcaggggc
     1561 cagcacttgg tctgtacatc atctctccta atcagtggct aagccatccg gaagcggccg
     1621 ttaagatcga gctctggcgc cgactgctca aagatcttca gcctcgtttg gctcgcgccg
     1681 gtgttgcttt aaagctgctt cgtatcgagc agtggcaaga cgtgccggct gccatgctgg
     1741 ccttttgtct agagcacggc atcactgagg tgcattgcaa ccgagagcaa ggcgtctatg
     1801 aacgacgccg tgaccgcgcg acctatcagt tgctgtccga gcacggcatt gcgctggtcg
     1861 gtcacgatgg gcagacattg cttgcgccag gctcgcttaa aacaggtgct ggtgccacct
     1921 atcgggtcta tagccccttt gctagagcct gccgagccca tatcctgcaa tcaccgctat
     1981 gtctcaccca agcgcctcaa agctgcgctt tgccaacggg tgttgaccct gacgacatcg
     2041 atgtgatttg gcctgacgaa ctgccgagcc tggctgatca atggccggct gaccttgatg
     2101 tgattcacga gcgtttgat
//
LOCUS       DATBNL010000682         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_88088, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000682 DATBNL010000000
VERSION     DATBNL010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88088"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VIC30_11535"
     CDS             <1..451
                     /locus_tag="VIC30_11535"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEY7805047.1"
                     /translation="ETPNDGHIKPDIIVFGLGRFGGRLARGLSDAGIKVLGVDFDPQA
                     IDQFKKNGFAVRFGDGIEAALLESLPLRHTRWIVSTIPDITSNKLLLEELQQFGFTGE
                     IAMVAREDSMGMTLKAMGVHNVLYPHNSAVDHVVDTLTEILAKEKAT"
     gene            448..1356
                     /locus_tag="VIC30_11540"
     CDS             448..1356
                     /locus_tag="VIC30_11540"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY7805048.1"
                     /translation="MSQPHSTFMVATDLSRFSGYAIGRAQIMADEQDAQIEIVHCLPD
                     SLLQTLKDNLLGNHEQSQRALLSHHTKLLNRSTKRLLGANLARVSTQLLQGDPDDILP
                     DHADTIGARLVLLGAHGKGFVKSLLIGSITSRLVRTLRQPALVVKTPARSPYSNVLIA
                     VDFSPASLQAIAISRQAAPSAHLTLVHLYDVPFAGMLRYAGIKSPDIAQYRHEIHAKS
                     DQNLHTLAQQSGLDPSNYTAISVEGGSASALLNLQTTLKTDLIVLGKHGRHLKHEFLI
                     GSVTQTILARSKSDVLVTVNTKLPQA"
     gene            1408..2334
                     /locus_tag="VIC30_11545"
     CDS             1408..2334
                     /locus_tag="VIC30_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009552465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7805049.1"
                     /translation="MNTNATANNTQTSPHSLSVRTPWLDIEVHEWNPDAKRSIVLAHG
                     WPDSAQSWFLVANILAAAGWRVIVPSLRGFGQTRFVDDTTPRSGQLSALGRDMVDLVQ
                     AMSLETPVLVGHDWGARAAANAVGLEPAIASALVMVSVGYGTNSPDQPMSIAQARRYW
                     YHWFMATPRGEQTVRHQGAEFARIMWETWSPAGWFTEADFEVACQAFTNPDWADITLH
                     SYRHRWGHAPGFALHDDDEKRLHPAPLISVPTLMLHGHEDYCNVAETSAGKEASFTSR
                     YERVLLPDVGHFPPREDPTRVAQEILRFMDSM"
     gene            complement(2326..>2908)
                     /locus_tag="VIC30_11550"
     CDS             complement(2326..>2908)
                     /locus_tag="VIC30_11550"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805050.1"
                     /translation="GGWLSDRVGGKRVMLLSAVITTVLAWPFFWMLHQSTLWMVYVGQ
                     LGFAVAIGPYLGAQPAFMVSVIKPAVRCTAAGLGYNITLGIAGGLSPMVATWLVSRTH
                     DDLSPAFMIITAGVISIVTLLSIKSTKMNATNDPLQRARSLIDAVDRGGVPSNPAIVN
                     AVARDLGLEVSRQAPLEDTIKRIREAVGRGSSH"
BASE COUNT          702 a          835 c          751 g          620 t
ORIGIN      
        1 cgagacgcca aatgacggtc acatcaaacc cgacatcatc gtgtttggtt tgggaagatt
       61 tggcggacgg cttgctcgag gtctatcgga tgctggcatc aaagtgcttg gggttgattt
      121 cgatccacaa gccattgatc aattcaaaaa aaatggcttt gcggtgcgct ttggtgacgg
      181 tattgaagcc gccctacttg agagtctgcc attacgacac acgcgctgga ttgtcagcac
      241 gatcccggac atcacgtcca ataagcttct actagaggaa ttgcagcaat tcggttttac
      301 gggcgaaatt gccatggttg ctcgagaaga cagcatgggc atgacattaa aagcgatggg
      361 cgtacacaac gtgctttatc cgcacaacag cgcggtggac cacgtcgttg acacactaac
      421 tgagatcctc gccaaggaga aagccacatg agtcaacccc atagcacttt catggttgcc
      481 actgacctgt cacgcttttc tggttatgcc atcggtcgcg cacaaatcat ggccgacgag
      541 caagacgctc aaatcgaaat agtgcattgc ctgccagaca gcttgctgca aacactcaaa
      601 gacaacttac ttggtaacca tgagcagtca caacgggctt tgctgtccca tcacaccaaa
      661 ctcctgaatc gcagcaccaa gcgtttactc ggtgccaatc tcgctcgcgt gagcacacaa
      721 ttactgcaag gtgatcctga cgatatcttg cctgatcacg ccgacaccat tggtgcaaga
      781 ttggttctct taggcgcgca tggcaaagga ttcgtcaaat ctttattgat tggctccatt
      841 acgtcgcgcc ttgtccgaac cctcagacaa cctgcgctcg tcgttaaaac acctgcgcgc
      901 agcccctata gcaacgtgct aatcgccgtt gatttttcgc cggcctcgct acaagccatt
      961 gcaataagcc gacaagcagc cccgagcgca cacttgacac tcgtacatct gtacgatgtc
     1021 ccgtttgctg gcatgcttcg ctacgccggg attaaatcgc cggacattgc tcaataccgt
     1081 cacgagatcc acgctaagag cgatcaaaac ctgcatacct tggctcaaca aagtggactt
     1141 gatccaagca attacacggc catcagcgtc gagggtggta gtgctagtgc cctactaaac
     1201 ctgcaaacca cgctaaagac agatctaatt gtgcttggca agcacggacg gcatttgaag
     1261 cacgaattct tgattggaag cgtgacacag acgattctgg cacgatccaa gtcagatgtt
     1321 cttgtcaccg tcaacaccaa actaccgcaa gcctagcgct gaccttgttc gccaatttcg
     1381 tacatcgcat aacgcccgac ataaaccatg aacacaaatg ccaccgccaa taacactcag
     1441 acatcaccac actcgctgtc agtacgaacg ccgtggctag acattgaggt ccacgagtgg
     1501 aatccggatg ccaagcgcag cattgttctg gcgcacggct ggccagatag cgcccagagc
     1561 tggttcttgg tggccaacat tctggccgct gccggctggc gtgtgatcgt gccatcgttg
     1621 cgaggctttg gacaaacacg gtttgtggat gacacaacac cacgcagtgg tcaattaagt
     1681 gcgctcggtc gagacatggt ggacttggtt caagccatgt cactagagac gcctgttctg
     1741 gtgggtcacg attggggtgc tcgagcggca gccaacgccg tggggcttga acctgcgatt
     1801 gcctcggctt tggtcatggt gtcggtaggc tacggcacca actcacccga ccaacccatg
     1861 agcattgccc aggcccgtcg ctattggtat cactggttca tggcgacgcc gcgcggagaa
     1921 cagaccgtgc gccatcaggg agccgagttt gcacgcatca tgtgggagac ttggtcaccg
     1981 gcgggctggt ttactgaagc agatttcgag gtggcctgcc aggccttcac taacccggat
     2041 tgggcagaca tcaccttgca ctcgtatcga catcgctggg ggcatgcgcc ggggtttgct
     2101 cttcatgacg acgatgagaa gcgactgcac cccgccccgc tgatctctgt gcccacgttg
     2161 atgctgcatg gtcacgaaga ctactgcaac gtagcagaga catcagccgg caaagaggcc
     2221 tcgttcacga gccgctatga gcgcgtgcta ttacctgatg ttggccactt cccgccgcgt
     2281 gaggatccaa cgcgcgtggc gcaagagatc ctgcgcttca tggactcaat gtgacgaacc
     2341 gcgcccaacc gcttcacgga tacgcttgat ggtgtcttcg agtggcgcct gacggctgac
     2401 ctcaagtcca aggtcgcgcg cgaccgcatt cacgatcgca gggtttgacg gcacgccacc
     2461 acgatcaacg gcatcaatga gcgatcgggc gcgttgcaag ggatcgtttg ttgcattcat
     2521 tttggttgat ttgatcgaca gcaaagtgac aatactaatg acacctgcgg taatgatcat
     2581 gaatgccggg ctcaagtcat cgtgggttcg actcaccaac catgtcgcca ccattggact
     2641 taagccgcct gctataccga gcgtgatgtt gtagcccaga ccagctgcgg tgcaacgcac
     2701 agccggttta atcacagaca ccataaaggc tggctgagcg cccaaataag ggccaatggc
     2761 cactgcaaag ccaagttgtc cgacgtacac catccacagc gttgactgat gcagcatcca
     2821 gaaaaaaggc cacgccaaca cagtcgtgat caccgctgat aacaacatga cccgcttgcc
     2881 accgacacga tctgagagcc agccacca
//
LOCUS       DATBNL010000683         5486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_167868, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000683 DATBNL010000000
VERSION     DATBNL010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5486
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167868"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..885)
                     /locus_tag="VIC30_11555"
     CDS             complement(61..885)
                     /locus_tag="VIC30_11555"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY7805051.1"
                     /translation="MDRLTPIFARFPPHVDVQFADVLCGNMPIDHHKPVGHIHWVKSG
                     NVRVLSDDQTHDVREPSVIFVPGPTSHSLSSTMGAEIVCAQFEFGQRYKNPLTTLGPD
                     IIVVPIAEVAEIEVIHTLLMREAFSEKCGRSLAASQLLQYFLLILFRYLIKTNAVPVG
                     PLKALGDAKILRAVTEIHRDPARAWTLERLADVATMSRATFARRFRELMGKTPLDYLT
                     DWRMTVAQSLLAQGLPIKSIATEVGYSSTSVLTRIFTQRLGSGPRQWLATHQLPQS"
     gene            1111..1647
                     /locus_tag="VIC30_11560"
     CDS             1111..1647
                     /locus_tag="VIC30_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019142999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin-like family protein"
                     /protein_id="HEY7805052.1"
                     /translation="MLTPRQPVPNLELPTLDHGPFNLAGDHPEHFSLVVFFRGLHCPL
                     CVKYLKELGALLPDLKERGVNVIAISSDDEDLARTMAGKVGVADLRFAYDLPLSAARA
                     WGLYISEGIGKTSAGIEEPALFAEPGVFLVRPDQTLYYGAVQTMPFARPSFADLMMAI
                     DFAIGKNYPARGEYTGAV"
     gene            complement(1682..1915)
                     /locus_tag="VIC30_11565"
     CDS             complement(1682..1915)
                     /locus_tag="VIC30_11565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805053.1"
                     /translation="MVPHFAPHLVALTPHRALQRDAHFDAHCATAGDMASADVSANAD
                     SFARLFMKSPLVVGQFVELFNNVVTTYSIPNAL"
     gene            2040..2387
                     /locus_tag="VIC30_11570"
     CDS             2040..2387
                     /locus_tag="VIC30_11570"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF044772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEY7805054.1"
                     /translation="MQRPAGYKPDYSAQNSAQVAAGATLFKSSKLSSNNLSCATCHTA
                     GAGFTAGFAQPFPHVMQMATANYGVGDIYADEAVQVCMMGPMAANPLPWDSADLQNLS
                     AFVLSEQAKFAGK"
     gene            2390..3049
                     /locus_tag="VIC30_11575"
     CDS             2390..3049
                     /locus_tag="VIC30_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805055.1"
                     /translation="MGHRVSRHVSPSVSRALPHKVSDSRWQALQRQRLLDDRHLVREL
                     GAAGVTPDEEQHYPPEDFIDSQTGAQYFLHCHDTPGLGVTTHVHIFKRWSSPELKAAG
                     LESTTTHLVALELDTDGTPTHCFTVNQWVVGDYWLSADHTVALFEGWGFSGTGIEKAA
                     GWGFWHRWLAAWVEMHLHGVAYDLLQRRDQTLSSRLEAQPEVNVLQDRSIEVFDRITL
                     E"
     gene            3054..4292
                     /locus_tag="VIC30_11580"
     CDS             3054..4292
                     /locus_tag="VIC30_11580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006163843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY7805056.1"
                     /translation="MPVSDKVFFQGHAGHQLAARLDRPDGPVRAVALLAHCFTCSKDI
                     PAARRIAGALTARGVAVLRFDFTGLGHSEGEFANTNFSSNVQDLLCAARYLADQGMPA
                     QLLIGHSLGGAAVIKAAPELETVRAVVTIGAPSDPSHVSHHFQADINQIHEQGSAEVL
                     LAGRPFQISKQFLLDIEQASLKGALSRLGAALLVLHSPIDQTVDISNAAEIFGHAKHP
                     KSFVTLDDADHLVSHESDAAYIAELIAAWSQRYLTPAISNRVEAPPEAPEGVVHVRSA
                     APGGFEQQVSIDTRHALTVDEPVSVGGRDAGPTPYQLLSASLGACTAMTIQMVARRRQ
                     WSLENVSVDVTHNKVHAATCESCTTTEPPVDVFERHIHLQGPLSDQQRQALLVIADKC
                     PVHRTLHQSSTIHTHLAGET"
     gene            4481..5486
                     /locus_tag="VIC30_11585"
                     /pseudo
     CDS             4481..5486
                     /locus_tag="VIC30_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006403126.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
BASE COUNT         1212 a         1418 c         1559 g         1297 t
ORIGIN      
        1 ttacggcggg acatgatctg acggcacagg aaacggcagg acaggataag gcaggactga
       61 tcaagattga ggcagttggt gagttgctag ccactgtcta ggccctgacc caagccgttg
      121 cgtgaagatt cgggtcagca ccgatgtgga tgagtaaccc acttctgtgg cgatcgactt
      181 gatcggcaag ccctgtgcaa gcagggactg tgccactgtc atgcgccaat cggtcaagta
      241 gtctaacggt gtttttccca tcagttcccg gaaccgacgg gcaaaggttg cgcgcgacat
      301 ggttgctaca tcggctaacc gttcgagcgt ccacgcacgc gccgggtcac gatgaatctc
      361 agtgacggcg cgcaggatct tggcatcgcc gagtgctttg agggggccca cgggaaccgc
      421 gttggtttta atgagatagc gaaacagaat taacaggaaa tactgcagca gctggctcgc
      481 agccaacgat ctgccacact tttctgagaa cgcttctcgc atcagcaagg tatgaatcac
      541 ctcgatctct gccacttctg caatgggcac cacgatgatg tcaggcccaa gggtggtaag
      601 cgggttcttg taccgctgcc caaactcgaa ttgagcacaa acgatctccg cacccatggt
      661 tgatgaaagg ctatggctcg ttggccctgg cacaaaaatc acactcggtt cacgcacgtc
      721 gtgcgtttgg tcgtcactca atacccgcac attgcctgac ttgacccaat gaatgtgccc
      781 aacgggtttg tgatgatcga tgggcatatt gccgcacagc acatcagcaa actggacgtc
      841 cacgtgtggc ggaaagcgcg caaagattgg tgttagtcga tccatccggt ccatgtcctt
      901 gacttgctcc agtgcaatgg tgtggctcgg gttgtagcta ggggtagaga gagtgtagcg
      961 aaagaatgag acgaaccgca aacaatatta gacaaacagc tacaaaacgt accctacact
     1021 aatcaggtcg atattcattt gttgactcag ttagccgcga atgtgctgcg aagtccgtct
     1081 tgtatttcac ccttcttaag gaaccctcca atgctcacac cccgtcaacc cgttcccaac
     1141 cttgagttgc ccaccctaga ccacggtcct ttcaatttgg ctggtgatca tcccgagcat
     1201 ttcagtctcg ttgtgttttt tagaggattg cattgcccgc tgtgcgtgaa gtacttaaaa
     1261 gagctcggtg cgctgttgcc tgacctgaaa gagcgtggcg tcaacgtgat tgcgatttcc
     1321 tcggatgatg aggaccttgc ccgcacgatg gctggcaagg ttggggttgc agaccttcga
     1381 tttgcgtatg acctaccttt aagcgccgca cgtgcttggg gtttgtatat ctctgaaggt
     1441 attggcaaga catcagctgg tattgaagag cctgcgttgt ttgccgagcc aggtgtgttt
     1501 ttagtgcgtc cagaccagac gctctactac ggtgcggtac aaaccatgcc atttgcccgt
     1561 ccgtcgtttg ctgacctcat gatggcgatt gatttcgcca ttgggaagaa ctatcccgca
     1621 cgtggtgagt acaccggcgc ggtttgagcg ttattccaaa taagtcaggt gcctaatgta
     1681 actaaagcgc attgggtatc gaataggttg taacgacgtt gttaaagagt tctacaaact
     1741 gacccaccac caaaggagat ttcatgaaca accttgcgaa gctatccgca ttagcgctga
     1801 catcagcgct cgccatgtca cctgccgttg cacaatgcgc atcaaaatgt gcatcacgct
     1861 gcaaagcccg gtgtggtgtc agtgcaacca agtgcggtgc gaaatgtgga accaagtgcg
     1921 ctgcgaaatg tggtgctaag tgtggtgcta agtgtggtgc taagtgcagc gcgaagtgtg
     1981 gaactaaatg cggtgcgaaa tgtggagcta agtgcgcagc aaaaggcgat acgagcttga
     2041 tgcaaagacc agcaggctac aaaccagatt acagcgcgca gaactcggct caagttgctg
     2101 caggagcgac tttgtttaaa agcagcaagt tgtcatccaa taacttgtca tgtgcgacat
     2161 gtcacacagc aggtgctggt ttcacagcgg gttttgctca gcctttcccg cacgtgatgc
     2221 aaatggcaac ggccaactac ggtgtgggtg acatctacgc tgacgaggcc gtccaggttt
     2281 gcatgatggg acccatggct gcgaatccat tgccttggga ttcagctgac ctacaaaatc
     2341 tctcagcttt cgtgttgagt gaacaggcca agttcgcagg taaataaaca tggggcatcg
     2401 tgtttcgcgt catgtttcgc cctctgtatc gcgcgctttg ccacacaagg tgtcagacag
     2461 tcggtggcaa gcgctgcagc gtcagcgctt gcttgacgac cgtcatctgg tcagagaact
     2521 cggtgcggcc ggggtcacgc ctgatgaaga gcagcattat ccaccggaag actttattga
     2581 tagtcagacg ggtgctcagt actttttaca ttgccatgat acgcccgggc ttggggtaac
     2641 cacgcacgta catattttta agcgctggtc ttcgcctgaa ctcaaagccg caggtttaga
     2701 gtcgaccacc acgcatttgg tggcacttga gcttgataca gacggtactc ctacgcattg
     2761 ctttacggtt aatcagtggg tggtaggtga ttattggtta agtgctgacc ataccgtggc
     2821 gttgtttgag gggtgggggt tttctgggac gggaatcgag aaggctgcgg gctgggggtt
     2881 ctggcatcga tggctggcgg cttgggtaga gatgcactta catggtgtgg cctacgactt
     2941 gttgcaacgt cgggatcaga cacttagcag tcggcttgaa gcacaacctg aggtcaatgt
     3001 cttgcaagac cgatccattg aagtgtttga ccgcattacc ttggagtaag gatatgcctg
     3061 taagcgacaa agtttttttc caaggccacg caggccacca gttagcggca cgtcttgatc
     3121 ggccagatgg gccagtgcgt gccgtggctc tattggccca ttgttttacg tgttccaaag
     3181 atatccctgc ggcgcggcgc atcgcgggtg ccttgactgc acgtggtgtg gccgtgttga
     3241 ggtttgactt cacgggtctt ggacattccg aaggcgagtt tgccaatact aatttttcct
     3301 caaacgtgca ggatctgttg tgtgcggctc gttaccttgc tgaccagggt atgcctgcgc
     3361 aattgttgat cgggcattcg ttaggtggtg ccgccgtcat caaagcagca ccagagctag
     3421 agaccgttcg agctgttgtc acgattgggg caccgtccga cccctcgcat gtatcgcatc
     3481 acttccaggc agacatcaat caaattcatg agcaaggcag tgctgaggtg ttgctagcag
     3541 gccgcccctt tcagatttca aagcagttct tgctggatat tgaacaggcg tcgcttaaag
     3601 gggcgttgtc gcgcctaggg gcggcattac tggtgctgca ctcgccgatt gatcagacgg
     3661 tggatataag taatgcggca gagatatttg gtcacgccaa acatcctaaa agttttgtga
     3721 cactcgatga cgctgaccac ctcgtatcgc acgagtccga tgctgcctac attgccgagc
     3781 tcattgcagc ttggtcacag cggtacctga cgccagcgat ctccaaccgg gtagaggcgc
     3841 cgcccgaggc acctgagggt gtggtgcatg tgcgctcggc cgcccccggt gggtttgagc
     3901 agcaagtcag tattgatacg cgccacgcgt taacggtgga tgaacccgtg tcggttggcg
     3961 gtcgtgatgc cgggcccacg ccctaccaat tgctgtctgc cagtttgggt gcctgcacgg
     4021 ccatgaccat ccagatggtt gcgcgtcgcc gtcaatggtc acttgagaat gtcagcgtgg
     4081 atgtcaccca caacaaagtt catgccgcca cttgcgagtc atgcacaacc actgagccac
     4141 cggttgatgt gtttgaacga cacattcact tgcaaggccc tttgtctgat cagcaacggc
     4201 aagcgcttct ggtcattgcc gataagtgcc cagtgcaccg gacgctacac cagagcagca
     4261 cgattcatac ccatctagcc ggagagactt gatgcagcct agtgttgtgg tctgagttgt
     4321 tgaattcggc atatcgaggg gcatttcatt cgttatccgg gtggagcctt gtcaccagta
     4381 cgcaaggcac gcaaggcacg cggcggcttg catctcattg cggattcgac cttgccatac
     4441 ggctgggtct tacataatta tttaaaggca ggtgcacaac atggtcaggt catctaaatc
     4501 aactcaagac aacgcgtaca cccacccgaa cccgcaggtg gtactcgtct tgcagggcgg
     4561 tggtgcgctc ggggcgtttc aggcgggtgt gtatcaagcg atggcgcaag caggcgtgga
     4621 acccgattgg gtcatcggca cctcgattgg cgccatcaac ggcgcgatca ttgctggcaa
     4681 cccacagacg caacgtctgg aaaagttgtc ggcgttctgg gatcgtgtca gtcaacgccc
     4741 ctcatcactg ccagacttta tgaacccttg gcgcgcccta ggcatcgact ggccccagat
     4801 gccacgactc gatcctgcca tggcgcagtg gcagcacaat ctgcgcatta tcagtcaggg
     4861 cgtgggtggt ttttttacgc ccaacccacc agcttggatg gacccaaagg ccttgctcgg
     4921 catagaacat gccagctact acaacaccag tcccttacga gatttgctca acgatctggt
     4981 gcagtttgag ggactcgccg ccgaaaacag tccgcgtttg acggtgggtg cagtcaacgc
     5041 acaaacgggt cagatgcgtt atttcgatag tcgcgatcaa gcgataggcg cggaccacgt
     5101 gatggcctcg ggcgctttgg caccggcctt tggtgcgata cgtattgatg gccaacccta
     5161 ttgggatggt gcttgtattc caacacgccg ttgtaggcag tgtttgatga caagccgcgt
     5221 cgccactcga ttatttttct ggcgcagcta tggggaccac acggaccgga gcctgattcg
     5281 atatgggatg tcatgggtcg tttaaaagac attcagtatg ccagtcgggc tgacagtcac
     5341 attgcggcac agcaacggct acatcgcctg cgtcacatca ttcgcgagtt aacagcgcag
     5401 ttaccagaag ccactcggcg tcaacctgag atcgaggcgc tcgatgcctg gggttgtggc
     5461 tcggtaatgc atgtggtacg gctcaa
//
LOCUS       DATBNL010000684         2503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_17545, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000684 DATBNL010000000
VERSION     DATBNL010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17545"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VIC30_11590"
     CDS             <1..216
                     /locus_tag="VIC30_11590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEY7805057.1"
                     /translation="CFITFLENTDVLIAPLREIVIERALACDETPVTLDRIKIISLMV
                     LWSQEAEVDHLILEELLRQHDGQETCH"
     gene            226..1110
                     /gene="gluQRS"
                     /locus_tag="VIC30_11595"
     CDS             226..1110
                     /gene="gluQRS"
                     /locus_tag="VIC30_11595"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017685390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEY7805058.1"
                     /translation="MYVGRFAPSPSGPLHLGSLVVALASYLDARVAAGQWLVRIEDLD
                     SPRCVPGADQTIFRQLTDLGMHWDGDVWYQSDRKVAYQTAFETLTARGLVYPCGCTRR
                     EIADAVLAAHGAFPAGERPYPGTCRSGLPKGRLAKAWRFWVEPGVVSFHDRWCGEQSQ
                     CVDQEVGDFVVLRADGIWAYQLAVVVDDAAQGVTDVVRGQDLLTSTARQQLLAQALGV
                     SVPSVMHLPLVTDENGLKLSKQNGAPSIDTDNPLITLLSAWQYFGLGPLAASSLDQFW
                     MQATASWAGYIFGQRLAP"
     gene            1167..>2503
                     /locus_tag="VIC30_11600"
     CDS             1167..>2503
                     /locus_tag="VIC30_11600"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HEY7805059.1"
                     /translation="MSKALIIAEKPSVALDISRALGGFTRNGDYFESDDHVLSSSVGH
                     LLSLMAPNDPVKGKWSFTHLPVIPPEFGLNPSDKRSAERLKLLVKLIKRKDVDRLINA
                     CDAGREGELIFRYIQQYAGTTKPVQRLWLQSMTRDAIREAFTNLRPDESLKPLEQAAR
                     SRAEADWLVGINGTRAMTAFNSKDGGFFKTTVGRVQTPTLTIVAEREAKIREFVPRDY
                     WEVRATFVAAAGLYEGKWFDPNFKKDPKDPERRDTRLWSETAAKTVEAACRGQVGTVT
                     EEAKPSTQLSPLLFDLTSLQREANSRFGFSAKATLSLAQSLYERHKALTYPRTDSRYL
                     PEDYLNTVKETIGVIAQGEGSIAKALAPHAQKILGQGWIKPSKRVFDNKKVSDHFAII
                     PTLQVPKELSEAEAKLYDLVVKRFMAIFFPAAEYRVTTRITQVQGHSFRTEGKV"
BASE COUNT          576 a          677 c          678 g          572 t
ORIGIN      
        1 tgcttcatca cgtttcttga gaacaccgat gtgttgattg caccattgcg tgagatcgtt
       61 atcgaacgtg cacttgcctg cgacgaaacc ccagtgaccc ttgatcgcat caagattatc
      121 tcgctgatgg ttctctggag ccaggaagcc gaggtggacc acttgattct cgaagagttg
      181 ctgcgccagc acgatggtca agaaacctgc cactaagccc gtgcagtgta tgtaggacgt
      241 ttcgccccca gccctagcgg cccattgcat ttggggtcgc tagtagtcgc actcgcaagt
      301 taccttgatg cccgtgttgc tgctggtcaa tggctggtgc gtatcgaaga ccttgatagc
      361 ccgcgctgcg taccaggcgc tgatcaaaca atcttccgtc aattaacgga tttgggtatg
      421 cactgggacg gtgatgtctg gtatcagtca gaccgcaaag tagcctatca aaccgctttt
      481 gagacgctca cagcgcgtgg ccttgtctat ccctgcggtt gcacccgccg agagattgca
      541 gatgctgtgt tggcagctca cggggctttc cctgccggag agcggccata ccctggcaca
      601 tgccgctctg gcttgcccaa agggcgcttg gcgaaagcct ggcgattttg ggttgagccg
      661 ggcgtggtgt catttcatga ccgctggtgt ggcgagcaat cgcagtgtgt tgatcaagaa
      721 gtgggtgatt ttgtggtgct gcgtgccgac ggtatttggg cgtatcaact cgcggtggtt
      781 gtcgatgacg cagcgcaagg cgtcaccgat gtagttcgcg ggcaagattt gctcaccagc
      841 accgccagac agcagttact ggcgcaggct ttaggggtat ctgtccctag cgtaatgcat
      901 ctgccactgg taaccgatga gaacgggctt aaactatcta aacaaaatgg tgcaccatcg
      961 attgataccg ataaccccct gataacactg ctatctgcct ggcagtattt tgggcttggt
     1021 ccactggcgg catcgtcgct ggatcaattc tggatgcagg caacagcaag ctgggctggg
     1081 tatatttttg gtcagagact tgcaccgtag ttaaatacac ccgtatcatc cccgctggta
     1141 tcgcatatag cgattgcagg aattaaatga gcaaagcact aatcatcgcg gaaaaacctt
     1201 cggttgcgct ggacatctcc agagcgcttg gcgggtttac gcgcaacggc gactattttg
     1261 agagtgatga ccatgtgttg tcatcgagtg tcgggcactt attaagcctg atggcgccta
     1321 acgaccccgt caaaggcaaa tggagtttta ctcacttgcc agtgatccca cccgagtttg
     1381 ggctaaaccc ctcagacaaa agatccgccg agcgcctaaa gcttctcgtc aaactcatca
     1441 agcgtaaaga cgttgaccga ctgattaacg cttgcgatgc tgggcgcgag ggtgagttga
     1501 ttttccgtta catccagcag tacgcgggca ccaccaaacc ggtgcaaaga ttgtggttgc
     1561 aatccatgac gcgagacgcg attcgcgaag cattcaccaa cctgcgcccc gacgagtcat
     1621 taaaaccact ggaacaagcc gctcgttcgc gtgccgaagc cgactggctc gttggcatca
     1681 acggcacacg cgccatgacg gcctttaaca gcaaagacgg tgggttcttt aaaaccaccg
     1741 tgggccgtgt acagaccccg acgctgacca tcgtggctga gcgcgaggcg aagattcgtg
     1801 agtttgtgcc acgtgattac tgggaggtgc gcgccacatt tgtcgccgcc gccggtctct
     1861 acgaaggcaa gtggttcgat ccaaacttca agaaagaccc aaaagacccc gaaagacgag
     1921 acacacgact gtggagcgaa acggctgcca aaaccgtcga agccgcctgt cgtgggcaag
     1981 tgggtacggt cactgaagag gccaagccga gcacgcaact ctcgcccttg ctgtttgatc
     2041 tcacctcctt gcaacgtgag gccaatagcc gtttcggctt ttctgccaag gcaacgcttt
     2101 cactggctca gtctttgtat gagcgtcaca aagcgcttac ctatccgcgt acggattcgc
     2161 gctatctgcc cgaagactat ctaaacaccg tcaaagaaac catcggtgtt attgctcaag
     2221 gcgagggttc gattgccaag gcgctggcgc cgcatgcaca aaaaatcctg ggtcagggtt
     2281 ggatcaaacc gagcaaacgc gtgtttgaca acaaaaaggt ctctgatcac tttgccatca
     2341 ttccgacgct gcaagttccc aaagagctaa gtgaagctga agccaaactc tacgacttgg
     2401 tggtcaagcg ttttatggcc attttctttc ccgctgctga atatcgggta accacccgta
     2461 tcacccaagt ccaaggtcat tcatttcgca ccgaaggcaa agt
//
LOCUS       DATBNL010000685         3262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117438, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000685 DATBNL010000000
VERSION     DATBNL010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117438"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VIC30_11605"
     CDS             complement(<1..459)
                     /locus_tag="VIC30_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY7805060.1"
                     /translation="MSRTLFVTTALPYANGSFHIGHIMEYIQADIWVRTMRMAGHTVH
                     FVCADDTHGAPIMLKAQSEGITAQELVARYAAERPAYLDGFHIKFDHWHSTDSPENTE
                     LSQDIYRKLRAAGLIETKTIEQFYDPVQGMFLPDRYIKGECPKCHAKDQYG"
     gene            complement(514..810)
                     /locus_tag="VIC30_11610"
     CDS             complement(514..810)
                     /locus_tag="VIC30_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003808374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805061.1"
                     /translation="MEFLNRLIRAVAFGLIALIGLGMALIFTFSTLIAVGILFLAAKL
                     RGKRFSVQEYWTSRQASRKPIFTKGSSGGNTTGGTTQSAYSRDNVTDVEARDVS"
     gene            883..1971
                     /gene="apbC"
                     /locus_tag="VIC30_11615"
     CDS             883..1971
                     /gene="apbC"
                     /locus_tag="VIC30_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014751951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEY7805062.1"
                     /translation="MTITSNDILALLARTIDPLSNKPYGDLVTDVVVKSNSEVSLTFK
                     PGYPVGHGSAAVLEPLTTALSAIGFTDAHIDVKPKIQAHAIRSGVERVKGVKNIIAVA
                     SGKGGVGKSTTAVNLALALADEGAAVGVLDADIYGPSVPLLLGLDGKPDSKDNKTMEP
                     MVNHGLKTNSIGFLVDADTPAIWRGPMVTQALEQLLRKTNWGELDYLIIDMPPGTGDI
                     ALTLAQKVPVSGAVIVSTPQDIALLDARKGVKMFEKVTVPVLGIIENMSVHVCSNCGH
                     VEHLFGEGGAQRMADEFQVPFLGKLPLALSIRENADAGHPTVVAAPDSTEATLYREIA
                     QRLAARLAGLPKDMASKFPSVVVEQRRQ"
     gene            2041..2604
                     /gene="dcd"
                     /locus_tag="VIC30_11620"
     CDS             2041..2604
                     /gene="dcd"
                     /locus_tag="VIC30_11620"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012432068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEY7805063.1"
                     /translation="MSIKSDLWIRRAAAQGMIEPFEAGQVRQNDKGKIVSYGTSSYGY
                     DVRCAREFKIFTNINSTIVDPKAFDEKSFVDFEGDICIIPPNSFALARTVEYFRIPRS
                     VLTVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYAGEGCAQMLFFE
                     SDEVCETSYKDRGGKYQGQEGVTLPRT"
     gene            2656..>3262
                     /locus_tag="VIC30_11625"
     CDS             2656..>3262
                     /locus_tag="VIC30_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Orn/Lys/Arg decarboxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY7805064.1"
                     /translation="MKFRFPIYIIDEDFRSENASGLGVRALASAIEAEGMEVIGVTSY
                     GDLSSFAQQQSRASAFILSIDDEDFDIDVAVDHSSAIQKLRSFIGELRFRNAEIPIYL
                     YGETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREAKSYVDGLAPPFFKELVEY
                     AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVC"
BASE COUNT          747 a          823 c          917 g          775 t
ORIGIN      
        1 gccgtactga tctttggcgt ggcatttggg gcattcgccc ttgatgtatc ggtcaggcag
       61 gaacatgcct tgaaccgggt catagaactg ctcaatggtt tttgtttcaa tgagtccggc
      121 agcgcgcagt ttgcggtaaa tgtcttggga cagttcggtg ttctcgggcg agtcagtcga
      181 atgccagtga tcaaatttga tgtgaaaacc gtcaagatac gccggtcttt cagcggcgta
      241 gcgtgccacg agttcttgcg cggtgatgcc ctcggattgg gccttgagca tgatgggggc
      301 gccgtgtgtg tcgtcagcgc aaacaaaatg caccgtgtgg cccgccatgc gcatggtcct
      361 tacccagata tcggcctgga tgtattccat gatgtgacca atgtgaaacg acccattggc
      421 ataaggcaaa gcggtagtga caaataaagt gcgcgacatg atgaccccgt gcgtgattca
      481 agtacgggat tttaacggtc ttgcgccaat tgcctaactg acgtcacgag cctcgacgtc
      541 ggtgacgttg tcacgcgagt aggcggactg tgtcgtgccc cctgtggtgt tgccaccaga
      601 gctccctttt gtgaagatgg gtttgcggct cgcctgacgg ctcgtccagt actcttgaac
      661 agagaagcgc ttgccacgca gtttggcggc gaggaataaa atgccgacgg caatcagcgt
      721 ggagaacgta aaaatcagtg ccatgccaag cccgatcaaa gcgatcagac cgaaagcaac
      781 agcacgaatg agacgattta agaattccat tatttaactt atctaggttg ttgtgaacat
      841 tgtgcatcaa cttatctgac tacgaaaccc ctaaaagatt ccatgaccat tacctcgaat
      901 gacattttgg cgcttctagc gcgcaccatc gatcctttaa gcaacaagcc atatggcgat
      961 ctcgtaacag acgtggtggt caagtcaaat agcgaagtca gcctgacatt taagccagga
     1021 taccctgtcg ggcacgggag tgccgccgta cttgagccct tgaccacggc actgtcggcc
     1081 attggcttta ccgatgcaca catcgatgtg aagccaaaaa ttcaggccca tgccatccgt
     1141 tcgggcgtcg agcgcgtcaa gggcgttaaa aatatcattg cggtggcatc cggcaagggt
     1201 ggtgtgggca aaagcaccac ggcggttaat ctggctctcg cattagccga tgaaggtgcg
     1261 gccgtggggg tgctggatgc cgacatttat ggaccgagtg tgccgttact gctgggccta
     1321 gatggcaagc ccgacagcaa agacaataaa accatggaac ccatggtcaa tcacgggtta
     1381 aagaccaatt cgatcggttt tttggtggac gcagataccc ctgccatttg gcgtgggccc
     1441 atggtcacgc aagcgctcga gcagctgctg cgtaaaacca actggggcga gctcgattat
     1501 ttgatcatcg acatgccccc aggtacgggc gatattgcgc tgacgctggc gcaaaaagtg
     1561 cccgtcagtg gcgcagtcat cgtcagcacg ccgcaagata ttgcattgct cgatgctcgc
     1621 aagggcgtga agatgtttga aaaagtcact gtgccagtgc ttggcattat tgaaaacatg
     1681 tcagtacatg tttgctcgaa ctgcggccat gtcgaacatc tgtttggcga aggtggcgca
     1741 cagcgcatgg ccgatgagtt ccaggtgccg tttttaggca agttgccact ggcattgtcg
     1801 attcgagaga atgccgatgc cggtcacccc acggtggttg ccgcacccga cagcaccgag
     1861 gccactctgt accgtgaaat cgcacagcgt ctggcagccc gcttggcggg tttgcccaaa
     1921 gacatggcca gcaaattccc ttctgtggtg gttgagcagc ggcggcagta gatactcacc
     1981 acatttgacg ggtcagggcg ttaaactcat gggtttaacc gctgttgggg aagccctgcc
     2041 atgagcatca aaagcgacct gtggatccgg cgtgccgccg cccaaggcat gatcgagccg
     2101 tttgaggctg gccaagtgcg tcaaaacgac aaaggcaaaa ttgtcagtta tggcaccagc
     2161 agctatggct acgacgtgcg ttgtgcccga gaattcaaga tctttacgaa tatcaattca
     2221 accatcgtgg accccaaggc gtttgatgag aagtcatttg tcgactttga gggtgacatt
     2281 tgtatcattc cacccaattc gtttgcgctt gcgcgcacgg ttgaatattt caggatcccg
     2341 cgtagtgtgc tcacggtatg cttgggcaag agtacttacg cgcgctgcgg catcattgtg
     2401 aacgtcacgc cgcttgaacc cgagtgggag gggcatgtga cgttggagtt ttctaatacg
     2461 acgccgctac cagccaaaat ctacgccggt gaaggttgtg cgcagatgtt gttttttgag
     2521 agcgacgaag tctgcgagac ctcttataag gatcgtggcg gcaaatatca gggtcaagaa
     2581 ggtgtgaccc tacctcgtac ctagcaacca gttgggcacc cgcctgccgg taatgagcat
     2641 gccttggagt ttgccatgaa gtttcgtttt ccgatttaca tcatcgatga ggatttccgt
     2701 tcagaaaacg cctctggcct tggtgtgcgt gcattggcct cggccattga ggccgaaggc
     2761 atggaagtca tcggcgtcac aagctatggc gacttaagct cctttgctca acagcaaagc
     2821 cgtgccagtg cctttatttt gtcgatcgat gatgaagatt tcgatatcga tgtggccgtt
     2881 gatcattcga gcgcaataca gaagctgcgc tcgttcatcg gtgaattgcg gtttcgcaac
     2941 gctgaaatac cgatctatct ctatggcgag acgcgtacct cagagcacat tcccaatgac
     3001 atcctgcgcg agctccacgg ctttattcac atgtttgaag acacgccaga gttcgtggcg
     3061 cgtcacatca tccgtgaagc caagagctac gttgatgggt tggcaccacc ttttttcaag
     3121 gaactcgtgg aatatgccca ggacggttca tactcttggc attgcccagg acactcgggt
     3181 ggcgtggcct ttctcaaaag cccagtcggg caaatgtttc accagttttt tggtgagaat
     3241 atgctgcgcg ctgacgtctg ta
//
LOCUS       DATBNL010000686         1628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_27921, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000686 DATBNL010000000
VERSION     DATBNL010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27921"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VIC30_11630"
     CDS             complement(<1..623)
                     /locus_tag="VIC30_11630"
                     /inference="COORDINATES: protein motif:HMM:NF013255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY7805065.1"
                     /translation="MSTDACPLRNALPDTPPLTVLVTGANGLVGRALCAELAGRGVRV
                     MAAVRNLESFQSLSGVQPLQAPDLDDASAQWPLAGVDVVVHTAARVHVMNPAPDENER
                     FLRVNRDGTAQLAKQCAAQGVTRLIFLSTIKVNGESTVPEVPFTVADAPNPTDPYAVS
                     KWEAEMQLLAVSQQTGLEVTIIRPPLVYGAGAKGNLGLLERAVRKGLP"
     gene            complement(700..1068)
                     /locus_tag="VIC30_11635"
     CDS             complement(700..1068)
                     /locus_tag="VIC30_11635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008164033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEY7805066.1"
                     /translation="MTKSELIAALAASHPQLAAIDTDVAVKTILDSMVNALANGQRIE
                     IRGFGSFSLSERAPRIDRNPKTGEQVMVPGKCVPHFKAGKELRERVDEAYAQQLAAST
                     DDESVSASDSDKPSAQASSQ"
     gene            complement(1091..>1628)
                     /locus_tag="VIC30_11640"
     CDS             complement(1091..>1628)
                     /locus_tag="VIC30_11640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018573373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEY7805067.1"
                     /translation="PGGIDGLVHLSDLSWTDTGEDAVRNFKKGDELEAVVLAIDTDRE
                     RISLGVKQLEGDPFNNFVATYDKGAVVQGTVKSVEPKGAVVTLSLDVEGYLRASEMAT
                     GRVEDATTVMKEGEEVQAMIINVDRKARSIQLSIKARENADTADSMQRMSEAGASTGT
                     TNLGALLKAKLNQAKDDE"
BASE COUNT          357 a          480 c          429 g          362 t
ORIGIN      
        1 ggcagtcctt tgcgtaccgc cctttcaagc aaccccagat tgcccttggc tccagcgcca
       61 tagaccagtg gcggacggat gatagtgact tctagacccg tttgttggct cacggccagc
      121 aattgcatct cagcttccca cttggaaacc gcgtaaggat cggttggatt gggtgcgtcc
      181 gcgactgtaa atggcacctc aggcaccgtt gactcgccgt tgaccttaat ggtgcttaaa
      241 aagatcaacc gcgtaacacc ctgcgccgca cattgcttgg ccagttgtgc cgtgccgtca
      301 cgattcaccc gtaaaaaccg ctcgttctca tcaggtgcag ggttcatgac atgtacgcgg
      361 gcggccgtgt gcaccaccac gtcaacacca gccaatggcc actgcgcaga cgcatcatcg
      421 aggtcgggcg cttgaagagg ctgcacgccc gacaggcttt gaaacgattc gaggttgcgc
      481 accgctgcca tcacccgaac accacgcccg gcaagctcgg cacacaaggc ccgccccacc
      541 aaaccattgg cgcctgtgac cagaaccgtc aaaggaggtg tgtcaggcag agcattacga
      601 agggggcagg cgtctgtaga cataccatct caataaaaaa acagacccag gtgagtcggt
      661 ctgtttcaat ggcactgcag tatgagtagc acagtaacgc tactgcgaag aggcttgagc
      721 cgatggttta tcgctgtcgg atgcgctcac cgattcatcg tctgtcgatg ctgccaattg
      781 ttgtgcgtag gcctcatcaa cacgctcacg caattccttg ccagccttga aatgcggcac
      841 gcacttgcca ggcaccatca cctgttcacc agtcttggga ttacgatcaa tgcgtggcgc
      901 acgctcagac agagaaaaac taccaaatcc tcgaatctca atgcgctggc cattggccag
      961 cgcattgacc atcgagtcaa gaatggtttt gacggccacg tcggtatcga tggcagcgag
     1021 ctgtggatgg ctcgctgcca gtgcggcgat gagttccgac ttagtcacgt tatccccgtt
     1081 gccaatcgac ttattcgtcg tctttggctt ggttgagctt ggctttcaac aaggcaccaa
     1141 ggttggtggt acctgtcgaa gcacctgctt cagacatacg ctgcatgcta tcggctgtgt
     1201 cagcgttctc gcgtgccttg atcgacaact gaatcgaacg cgccttgcga tcgacgttga
     1261 tgatcatggc ctgcacctct tcgccttctt tcatgacggt ggtggcatct tcaacacggc
     1321 cggtggccat ttctgaagca cgcaagtagc cctcgacgtc gagcgacaag gtcaccacgg
     1381 cgcccttggg ctcaactgac ttaacagtgc cttgaacaac agcgcctttg tcgtaagtag
     1441 ccacaaagtt gttaaacgga tcaccttcga gttgcttaac gccgagtgat atacgctctc
     1501 tgtcggtatc gatggccagg accacggctt cgagttcatc accctttttg aagttgcgaa
     1561 ccgcatcttc accggtgtcg gtccatgaca ggtcggacaa gtgcaccaaa ccgtcaatgc
     1621 cgccgggc
//
LOCUS       DATBNL010000687         2177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_137776, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000687 DATBNL010000000
VERSION     DATBNL010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137776"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            5..625
                     /locus_tag="VIC30_11645"
     CDS             5..625
                     /locus_tag="VIC30_11645"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY7805068.1"
                     /translation="MNFTTVLFYILATVLVVAAFRVVTAKSPITAVLFLILAFANASM
                     IWMLLGAEFLSLLLVLVYVGAVMVLFLFVVMMLDVKMEALRAGMRHYLPLGLIIGGIM
                     VVEMSFVLMQSWGEIGPAAKMADDYNNTRTLGELMYTEYVYAVEVGAVILLVGMIAAI
                     SLTLRRRKDARYSNPSEAVRVRAKDRVRIVDMKSAAPVNDKPEEKA"
     gene            625..933
                     /gene="nuoK"
                     /locus_tag="VIC30_11650"
     CDS             625..933
                     /gene="nuoK"
                     /locus_tag="VIC30_11650"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY7805069.1"
                     /translation="MELTLSHFLVLGAILFAIGVFGIFLNRRNLIVLLMSIELMLLAV
                     NMNFVAFSTWSGDAAGQIFVFFILTVAAAEAAIGLAILVLLFRNVNTINVDDLDRLKG
                     "
     gene            1008..>2177
                     /gene="nuoL"
                     /locus_tag="VIC30_11655"
     CDS             1008..>2177
                     /gene="nuoL"
                     /locus_tag="VIC30_11655"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY7805070.1"
                     /translation="MSSVPTIYLIIALAPLLGAVVAGLFGTGFLGKPVSRFMAHRITT
                     SLVGLSTILSFYVLYDVAQGNTFEGTWYTWAMVGSYHMEIGFLIDPLSSLMMTVVTFV
                     SLMVHIYSIGYMADDDGYERFFAYISLFTFSMLMLVMANNMLQLFFGWEAVGLVSYLL
                     IGFYYKRDSAIFANMKAFIINRVGDFGFILGIGLLFAYTGSLNYVEVLDKAEQLSTLS
                     LPGTDWLLLTVVCICLFIGAMGKSAQVPLHSWLPDSMEGPTPISALIHAATMVTAGIY
                     MVARFSPIFEFSDTALSLMLVVGGFGALFLGILGIVQNDIKRIIAYSTLSQLGYMVVA
                     LGASAYSVAIFHMMMHAMFKALLFLAAGSVIIALHHNQDVRYMGGLKKYMPVTYYT"
BASE COUNT          405 a          517 c          588 g          667 t
ORIGIN      
        1 tgacatgaac tttactactg tcctttttta tatcctggcc accgtcctcg tggtcgcagc
       61 gtttcgggtt gtgacggcta aaagccccat aacggctgtt ctgttcttaa ttctggcgtt
      121 tgccaatgcc tccatgatct ggatgctgct tggggcagag ttcttgtctc tgctactggt
      181 gttggtgtat gtcggtgccg tgatggtgct atttctcttt gtggtcatga tgcttgacgt
      241 caagatggaa gcgttgcgcg ccggtatgcg tcactactta ccgcttggtt tgatcatcgg
      301 cggcatcatg gtcgttgaaa tgtcgttcgt tttgatgcag tcgtggggtg agatcgggcc
      361 tgcagcgaag atggctgatg attacaacaa cacacgtacg ctcggcgaac tgatgtacac
      421 cgaatatgtt tacgccgttg aagttggtgc cgtgattcta ctcgttggta tgattgcggc
      481 gatttctttg acgctgcgtc gccgcaagga cgctcgctac agcaatccct cagaggcagt
      541 ccgggtgcgt gccaaagatc gcgtgcgcat tgttgacatg aagtcggcag cccctgttaa
      601 cgacaaaccc gaagagaagg cgtaatggaa ctaacactgt ctcatttttt ggtgctaggt
      661 gccattttgt ttgccatcgg ggttttcggg attttcttga accgtcgcaa cctgatcgtg
      721 ttgctgatgt cgattgagtt aatgctgttg gccgtgaaca tgaacttcgt ggctttctcg
      781 acgtggtccg gtgatgccgc cggtcagata tttgttttct ttatcttgac agtggcagca
      841 gctgaagcag cgattggctt ggcgatattg gtgttgctgt ttcgcaatgt caacacgatt
      901 aatgtcgatg atcttgatcg gctcaagggc taacctgacg ggcttgagct tatccgtgaa
      961 tgtaactagt agaccggtcg gaagacccac taaaagaaca cttacttatg tctagcgtac
     1021 ctaccatcta cctcatcatc gccctggccc cgttactcgg cgccgttgtg gcgggccttt
     1081 ttggtaccgg gtttctgggt aagccggtta gccgcttcat ggcacaccgg attacaacct
     1141 ctttggtcgg tttatccacg attttgtcat tctatgtgct gtatgacgtt gcacagggca
     1201 atacctttga aggcacttgg tatacatggg ccatggtggg ttcttaccac atggaaattg
     1261 gctttctgat tgacccgctg tcttcactca tgatgacggt tgtgaccttt gtgtcgctca
     1321 tggtgcacat ttacagtatt ggttacatgg cagacgatga tgggtacgag cggttttttg
     1381 cgtacatttc gctctttacc ttctcgatgc tcatgttggt catggccaac aacatgttgc
     1441 agttgttttt tgggtgggaa gcggttggct tggtgtcgta cttgctgatt ggtttttatt
     1501 acaagcgcga ctcagcgatc tttgccaaca tgaaggcctt catcatcaac cgcgtgggtg
     1561 attttgggtt tatcttgggt attggcttgc tctttgccta caccggctcg cttaattacg
     1621 ttgaagtctt ggacaaagct gagcaactct cgaccctgtc attgcccggc actgactggc
     1681 tgttactgac agtggtttgt atctgtctgt tcatcggtgc catgggtaag tcagcgcagg
     1741 tgcctttgca ctcttggctg ccggactcga tggaaggtcc aacacccatt tcagctttga
     1801 ttcacgccgc taccatggtc acggccggta tttacatggt ggcgcgtttc tcacccatct
     1861 ttgagttctc ggatacggcc ttgtcgctga tgctagttgt cggtggtttc ggtgcgctgt
     1921 tcttgggcat tctcggtatc gtacaaaacg acatcaagcg catcattgcg tattccacat
     1981 tgtcccagct cggatacatg gtggtggcgc taggcgcttc agcctactca gtggctattt
     2041 tccacatgat gatgcacgcc atgttcaaag ccttgctctt tttggcggcg ggctcggtca
     2101 ttatcgcgtt gcaccacaac caggatgtcc ggtacatggg tggcttgaag aagtacatgc
     2161 ccgtgacgta ttacaca
//
LOCUS       DATBNL010000688         2340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_137791, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000688 DATBNL010000000
VERSION     DATBNL010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137791"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VIC30_11660"
     CDS             complement(<1..193)
                     /locus_tag="VIC30_11660"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015040649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEY7805071.1"
                     /translation="MPTRRIIFSRIALDASIGILEHERIATQPIHIDAEIEVDVHRPT
                     DDSNIDSVLDYRTLHAAIVQ"
     gene            328..1224
                     /locus_tag="VIC30_11665"
     CDS             328..1224
                     /locus_tag="VIC30_11665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY7805072.1"
                     /translation="MSKVWDAIIVGAGPAGASCAVWLRHLGLDPLLLESSDRIGGLAA
                     RNPFADIWTVTSPGQTGAEVAQQIAGQVQASGLDVWLNTSVLAVSGSYPLFTVQATRA
                     DQPVQPLQAKTVVIATGVRPKDLPGFAGQTFEGVIVGPGDEIMSADFQGKRVALLGGG
                     DNAFENYAFVKERGANTACIYARTLRAQKQFVDRVPASDLVVGASDVDPAARTVNGQA
                     YDWILVLYGWQANIGFLGDLSLTRDDRGFVQTDTVDAQTTVLGVYAIGEVAQRMHPCV
                     PTAMADGVVAAKAIEKILTAGQ"
     gene            complement(1218..2318)
                     /gene="mnmH"
                     /locus_tag="VIC30_11670"
     CDS             complement(1218..2318)
                     /gene="mnmH"
                     /locus_tag="VIC30_11670"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043828 - tRNA 2-selenouridine synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HEY7805073.1"
                     /translation="MATPELVNNYAQLLLAKTPLLDVRAPVEFVQGAFPGAVNLPLMN
                     DAERQAVGITYKEQGQDAAITLGHQLVSGQVRQARIAAWIQFLQQHPDAVVYCFRGGM
                     RSQIAQQWLSEAGFARPRIEGGYKAMRQFLLQNLTDTVNQSQFVVVGGLTGSGKTDVI
                     VDLDGKLDLEALARHRGSSFGGRAQRQPSQIDFENNLSIDLLRLTQEKRSSIAVEDES
                     HLIGRCAVPHVLRQATQLAPMVWVTAPLDERVSRIQRDYVESLAADYIATYGQEDGMQ
                     QYQAHLTKSLYNLRKRLGLERYAQLQKYLEAALAQQVSQNSFAGHQQWIEPLLTDYYD
                     PMYKYQRQQKQSPLVFEGTVSEVIDYLRSQGH"
BASE COUNT          472 a          585 c          703 g          580 t
ORIGIN      
        1 tctgaacgat ggctgcgtgc aatgtgcgat agtccagcac gctgtcaata ttgctgtcgt
       61 cagttggccg gtgaacatcg acttcgattt cagcgtcaat gtgaatcggc tgtgtggcga
      121 tgcgctcgtg ctccaggatg ccgatactgg cgtcaagggc aatgcgcgag aaaataatgc
      181 gtcgagtggg catgaggcgt ctacatattt aaaacagccc gtattgtagg gcgtagcagg
      241 tgtgtttatt ggcttagttg ggctcgggtg gtttagggat gtttagccaa ggcatgcccg
      301 tacaatcttt ctcaaaggga gagcgtgatg agcaaagttt gggacgccat tatcgttggt
      361 gctggaccgg ccggggcgag ttgcgcagtt tggttgcgtc accttggcct tgatccgttg
      421 ctgcttgaat caagtgaccg tattggtggc ttggcggcta gaaacccgtt cgccgatatt
      481 tggacggtga cgagccccgg gcaaacaggc gctgaggtgg cccaacaaat agcgggtcaa
      541 gtacaagcat ccggcctgga tgtctggctc aacacgtcgg tcttggccgt ctctggcagt
      601 tacccgctat tcacggtgca agcgacgcgt gctgaccaac cggtacagcc cctgcaagcc
      661 aagactgtgg ttattgccac gggggtgcga ccgaaagact tgcccggttt cgctggtcaa
      721 acgtttgagg gtgtgattgt tggaccgggc gatgaaatca tgtctgccga ttttcagggt
      781 aagcgcgtgg ctttgctcgg aggtggcgac aatgcctttg agaactacgc gttcgttaaa
      841 gagcgtggtg caaacacagc ctgtatttat gcccgcacct tacgcgctca aaagcagttc
      901 gtcgatcgcg ttcctgccag cgacctggtg gtaggtgcta gtgacgttga cccggctgca
      961 agaaccgtta acggccaggc ctatgactgg attttggtgt tgtatggctg gcaggccaat
     1021 atcgggttct tgggggattt gtcgctgact cgagatgatc gagggtttgt gcaaaccgac
     1081 accgtggatg cgcaaaccac ggtgctaggg gtctatgcca ttggtgaagt cgcgcagcgt
     1141 atgcatccgt gcgttcccac agccatggcc gatggggtgg tggcagccaa agccattgaa
     1201 aagatattga ccgcaggtca gtgaccttga gaccttaagt agtcaatgac ctctgagaca
     1261 gtgccttcaa ataccagcgg actttgcttt tgttggcgct ggtatttgta catcgggtcg
     1321 tagtaatcgg ttagtagcgg ctcgatccac tgttgatgcc ccgcaaagct gttctgactg
     1381 acttgttggg ccagtgctgc ttccagatat ttctgtagct gcgcatatcg ctcaaggcca
     1441 agtcgtttgc gcaggttgta aaggcttttg gttaaatgcg cttgatactg ttgcatgccg
     1501 tcttcttggc cgtaagtagc gatgtagtcg gcagccaagg attcgacata gtcccgttgg
     1561 atcctgctga cgcgctcgtc tagcggcgca gttacccaga ccattggggc tagctgggtt
     1621 gcttgcctga gtacatgtgg cacggcacac ctgccgatca agtgtgactc atcttccacg
     1681 gcaatgctag atcgcttctc ttgcgttagg cgcaacaggt caatgctcag gttgttctca
     1741 aaatcgatct ggctgggctg tcgttgcgca cgtccaccga agcttgatcc gcggtggcgt
     1801 gccagcgcct cgaggtcaag cttgccgtct aaatcgacaa tcacatcggt tttaccgctc
     1861 ccggtcagac cgcccaccac gacaaactga ctttggttga cggtatcggt caggttttgc
     1921 agtaagaact gacgcatggc tttgtagccc ccctcgatac gggggcgtgc aaagccggct
     1981 tcacttaacc actgctgggc aatttgtgag cgcattccac cacgaaaaca gtacaccacg
     2041 gcatccgggt gttgctgcag gaactgaatc catgcggcaa tgcgcgcttg gcgcacttgg
     2101 ccgctgacga gttgatggcc aagcgtgata gccgcatctt gtccttgctc tttataagta
     2161 atgccaaccg cttggcgttc ggcgtcattc atgagcggca gattaactgc cccgggaaag
     2221 gcgccttgca cgaactctac gggcgcgcgc acgtcaagca gtggggtttt tgcgagcaac
     2281 aactgagcat agttgttgac aagttcaggt gtggccacgg ctgtcagtcg agtttggtta
//
LOCUS       DATBNL010000689         2243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_17649, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000689 DATBNL010000000
VERSION     DATBNL010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17649"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1432
                     /locus_tag="VIC30_11675"
     CDS             <1..1432
                     /locus_tag="VIC30_11675"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012761446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY7805074.1"
                     /translation="QAYVNGNWIQGQANTTFDVDNPANGQTIAQVANLGQTDAQAAID
                     AANAAWPAWRALTAKTRSGILRKWFDLINQNADDLARIMTIEQGKPFAEARGEVTYGA
                     SFVEWFAEQAKRIMGDTIEAPIPNTRIMVLREPIGVCAAITPWNFPNAMITRKVAPAL
                     AAGCTVVLKPAEQTPLSALALAELAEQAGVPAGVLNILTADSEQSIAIGHVLCDSPVV
                     RKLTFTGSTQVGRILMQQSAPTIKKLSLELGGNAPFIVFDDADLDAAIEGAIASKYRN
                     AGQTCVCTNRFYVHASVYDAFAEKLAAAVESRLKVGEGFEQAVTTGPLIDDAAIAKVK
                     EHVQDAVSKGATIVTGGKAHERGSRFYQPTVLTNVNQDMLCMREETFGPVAPIVKFED
                     EADVIVQANNTEFGLAAYFYSRDIGRIYRTAEALEYGIIGVNAGIISSEVGPFGGVKQ
                     SGLGREGSVYGIDEFLEMKYVCLGGI"
     gene            complement(1541..>2243)
                     /locus_tag="VIC30_11680"
     CDS             complement(1541..>2243)
                     /locus_tag="VIC30_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEY7805075.1"
                     /translation="RREGYELAVSRPRVLFKEIDGVKCEPFELLTCDVEDGHQGSVME
                     ELGLRKGELQDMQSDGRGRTRLEYRIPARGLIGFQSEFLTMTRGTGLMSHIFDEYAPM
                     REGSVGERRNGVLISQDNGDAVAYALWKLQERGRMFVGPGEALYEGMIIGIHSRDNDL
                     VVNPIKEKKLTNVRASGKDEHIDLTTPVKLSLEYAVDFIDDDELVEVTPKSIRLRKRY
                     LQEHERRRMARETSA"
BASE COUNT          545 a          642 c          568 g          488 t
ORIGIN      
        1 gcaggcctat gtcaacggca attggattca aggacaagcc aacacgacgt ttgacgtaga
       61 caacccggct aatggacaga ccatcgctca ggtggccaac ctcgggcaaa ccgatgctca
      121 ggctgccatt gacgcagcca atgccgcgtg gcctgcttgg cgcgcactaa cagccaagac
      181 acggtcaggc attcttcgca aatggttcga cctcatcaat caaaacgccg atgacctcgc
      241 gcgcatcatg accattgagc aaggcaaacc gtttgccgaa gcacgcggcg aagtgaccta
      301 cggtgcctcg tttgttgagt ggtttgctga acaagccaag cgcatcatgg gcgataccat
      361 cgaagcgccg attccaaata ctcgtatcat ggtgttgcgc gaacccattg gcgtgtgcgc
      421 ggcaatcacg ccttggaact tccccaatgc catgatcacc cgtaaggttg caccagcgct
      481 agcagccggt tgcacggtgg tgttgaaacc ggccgaacaa acaccacttt cagcgcttgc
      541 cttagcagaa ttggccgaac aggccggcgt gcccgcaggt gttctgaaca tactgacagc
      601 cgatagcgaa caatccatcg ccattgggca cgtgttgtgc gacagcccag tggtgcgcaa
      661 actgaccttt actggatcga cccaggtcgg ccgaattctg atgcagcaaa gcgcacccac
      721 catcaaaaag ctctcgctcg agctcggtgg taacgcacca tttatcgtgt ttgacgatgc
      781 tgatcttgat gccgcaatcg agggagcgat tgcctccaag tatcgtaatg cgggtcaaac
      841 ctgcgtttgc accaaccgct tttatgtcca tgcctctgtc tatgacgcct ttgccgagaa
      901 acttgccgcg gctgtggagt cgcgactgaa ggtcggagaa gggtttgagc aagcagtcac
      961 aaccggccca ctgattgacg atgctgccat cgccaaagtc aaggaacacg tgcaggacgc
     1021 ggtgagcaaa ggcgccacga ttgttaccgg tggtaaggcg cacgaacgtg gcagccgttt
     1081 ctatcagccc accgtgctga ccaatgtcaa ccaagacatg ctgtgcatgc gcgaggagac
     1141 atttggtcca gtggcaccca tcgtcaagtt tgaagacgaa gccgatgtca ttgtccaagc
     1201 caacaacacc gagtttggcc tagccgccta cttctacagc cgtgacatcg gtcgaatcta
     1261 ccgtactgcc gaagccttgg agtacggcat cattggcgtg aatgccggca tcatatcaag
     1321 tgaagtcggg ccatttggtg gcgtgaaaca atcgggcctg ggccgcgaag gctcggtcta
     1381 cggcatcgac gagtttcttg agatgaaata cgtctgctta ggtggcatct agacaaaccg
     1441 acaatttagg ctggcaattc ataccgtcaa ttagatctcg cactaaacaa aaaggctgag
     1501 tccgtagggc tcagcctttt tgtttcaatt ggcgttgatg ttacgcgctg gtttcacgtg
     1561 ccattctgcg acgctcgtgc tcttgcaggt aacgtttgcg cagacggatc gatttcggtg
     1621 tgacctcaac cagttcatca tcatcaataa agtccactgc gtactccagc gacagtttca
     1681 ccggtgtggt caagtcgatg tgttcgtctt tgcccgaggc gcgcacgttg gtaagctttt
     1741 tctctttgat tgggttaacc acaagatcat tgtcacgact atggataccg atgatcatcc
     1801 cttcgtatag cgcctcacca ggaccgacaa acatgcgacc gcgttcttgc aacttccaaa
     1861 gcgcataggc aactgcatca ccgttatcct ggctaatcaa tacgccgtta cgacgctcgc
     1921 caacagagcc ctcgcgcatc ggtgcatatt catcaaaaat atgactcatc aagccagtac
     1981 cacgggtcat cgtcaaaaac tcactctgaa acccgataag acctcgagcc ggaatacgat
     2041 actcaagtcg ggttctacca cggccatcgg actgcatatc ttgcaactca cctttgcgca
     2101 ggccaagctc ttccatgaca gagccttgat ggccatcctc gacatcacat gtcaacaact
     2161 caaatggctc gcacttaaca ccatcaatct ctttgaacag cacgcgcggg cgagaaacgg
     2221 caagctcgta gccctcacga cgc
//
LOCUS       DATBNL010000690         2488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_117544, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000690 DATBNL010000000
VERSION     DATBNL010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117544"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..305
                     /locus_tag="VIC30_11685"
     CDS             81..305
                     /locus_tag="VIC30_11685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805076.1"
                     /translation="MKEVHVRLNCETRELIADLSAIQNEVNKFAAHREQDEALMRQAL
                     EALDEYIYACTPKADKLGIAAVSALRMRLK"
     gene            486..644
                     /locus_tag="VIC30_11690"
     CDS             486..644
                     /locus_tag="VIC30_11690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805077.1"
                     /translation="MPTYNGESWLDRYRREALIDQERLDSLERLNESREPDCADSETA
                     QADPISTA"
     gene            complement(805..1218)
                     /locus_tag="VIC30_11695"
     CDS             complement(805..1218)
                     /locus_tag="VIC30_11695"
                     /inference="COORDINATES: protein motif:HMM:NF022795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3TM-type holin"
                     /protein_id="HEY7805078.1"
                     /translation="MALPLLIPAALTLIDKLFPDANSANDAKLKVLEMQQKGELATLE
                     ADMALAQGQMDINKVEAATDKFRGGWRPAAGWVCVFGLFYTFLLKPLLPWFAALFGLD
                     VEPLPAIDTMELMALLGGMLGLGGYRTVERLKGKA"
     gene            complement(1220..1570)
                     /locus_tag="VIC30_11700"
     CDS             complement(1220..1570)
                     /locus_tag="VIC30_11700"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEY7805079.1"
                     /translation="MRHFKLSEFACKCGCGKAEMNEDTLFKLDFARHLADIPFVVTSG
                     YRCEAHNRRVGGKSNSAHTRGYAVDIRVNNSAARYAIIDALMRAGFNRIGIAKTFIHA
                     DDDPSLPPNVIWDY"
     gene            complement(1713..2093)
                     /locus_tag="VIC30_11705"
     CDS             complement(1713..2093)
                     /locus_tag="VIC30_11705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805080.1"
                     /translation="MSDEEQSTHQMVVGLHRRFDHVEKDVKHLTEQSQLASERMIRME
                     GRIDLAEAKSDALAERETLIHENVKDALTATNSLVKKLFDKFDQHTVDENNERKKLMV
                     WIIATCVSVLSGIGMVLFAEVFTK"
BASE COUNT          592 a          688 c          616 g          592 t
ORIGIN      
        1 gcgcttgatt ggtacgccgc gaactactgg cgtccagaag caaccgacaa caccatcgcc
       61 gcactacgag agaggctgaa atgaaagaag tccatgtacg actaaactgt gagactcggg
      121 aactgattgc agacctgtcg gcaatacaga atgaggtgaa caagtttgcc gctcatcgtg
      181 agcaagacga agcgctgatg cgtcaggcgc ttgaggctct ggacgagtac atctacgcat
      241 gtacgccaaa ggccgacaag cttgggattg ctgcggtcag tgcgttgagg atgcgactga
      301 aatgaaccta cctaacgacg tatcccggtg tcacggcaaa gacgagccga tatgtaacaa
      361 ctgcgcacga aggttgcaaa tacatcggga cgcaactatt ccgacaaaag cagtccgttg
      421 gttttcatac atcgcacccg tccccaaatg ggactactgc gagcaacaca ttaaggagca
      481 aagcaatgcc cacatataac ggagagtcct ggctcgaccg ctaccggcga gaagcgctta
      541 ttgatcagga acgactagac agtctggagc gcttaaacga atcacgggag ccagattgcg
      601 ctgactcgga aacggcgcaa gcggatccaa tttcaaccgc ttgacttgct cgcgtagcag
      661 cggcgtgcga tgcagaccac acagagcccg aaaaatcgtc cagttgaatc tgattacatc
      721 gcccatgtca tgctcctagt ttggtgggag ggcgggtgtg ccccacgccg aaacaacctg
      781 caaggttgac cctcccggtg atcgttatgc cttgcctttg agtctttcca cggttcgata
      841 tccacccagc cccagcatgc cgccaagcag tgccatcagc tccatcgtgt cgattgccgg
      901 gagcggttcg acatcaaggc caaacagcgc cgcgaaccac ggcagtagtg gtttgagcag
      961 gaaggtgtag aacagtccga acacgcacac ccatcctgct gcaggtcgcc atccaccccg
     1021 gaacttgtcc gttgcagcct cgaccttgtt gatgtccatc tgcccttgag caagcgccat
     1081 gtccgcctca agcgtggcca gttcgccttt ctgctgcatc tccaacacct tcagcttggc
     1141 atcgtttgcc gaattcgcgt caggaaacag cttgtcgatc agagtgagcg cagcagggat
     1201 caaaagtggt agtgccatat cagtaatccc atatcacgtt aggtggcagc gacggatcat
     1261 cgtcggcatg gataaacgtc tttgcgatac cgattctgtt gaacccggca cgcatcaacg
     1321 catctatgat cgcataacgc gccgccgaat tattaacccg aatatcgacc gcgtagccac
     1381 gagtgtgcgc cgagtttgat ttgccgccca cgcgtcgatt gtgggcctcg cagcggtatc
     1441 cagatgtgac cacgaacgga atgtctgcaa gatgtcgcgc gaaatccagt ttgaacaaag
     1501 tatcttcgtt catttcggct tttccgcatc cgcacttgca cgcgaattct gatagtttga
     1561 aatgtctcat gtcgttgcac gcctatacgc tctgataaca aaccaaacgc aatcctcttt
     1621 catctgctta ctcttctggc acgtctcgcg cttttttccc tcagtgatgt atgtagttag
     1681 gttttcgcac ttcttacact tttctggagt tgtcatttcg taaagacctc ggcaaatagc
     1741 accatcccga tgccgctaag tacagatacg caagtggcga tgatccaaac catcagcttt
     1801 ttgcgctcgt tgttttcatc caccgtgtgc tgatcgaact tgtcaaacag cttttttaca
     1861 agactattcg tagccgtcaa tgcgtctttc acgttttcgt gaatgagcgt ctcgcgttca
     1921 gcgagtgcgt cagatttggc ttcagccaaa tcaatacggc cttccatgcg gatcatcctt
     1981 tcgctggcga gctgcgactg ctcagtgagg tgctttacgt ctttctcaac gtgatcgaac
     2041 cgccgatgca agccgaccac catctgatgc gtgctttgtt cttcatcgga cattctgatc
     2101 ctctgcaact aattttttag ctcgttccaa atcggcaaga tagctgccga gacaatgctc
     2161 gtgttcgccg aatcgctcaa acacccaatc aatcgcccgt tgcagttttg ctcgtttgaa
     2221 cctgtaagcg tcgccagaaa ctgagtgatt ggcctcaccg ttgaagatga ggacgtttag
     2281 ccattggctt gtggcatcag cgagacggtg taagcgagac atcatgcagg ccactcaaga
     2341 actggcaaat ctggctcaat atcttcaaag ccagtaggca ctggtcgagt accggcctct
     2401 acttcagcca agattgtgta gagcgttgcc catgtgttgt cccgagcatt cacacaatac
     2461 tgaccttctg cttgaaactt tggtacgg
//
LOCUS       DATBNL010000691         1952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_127799, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000691 DATBNL010000000
VERSION     DATBNL010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127799"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VIC30_11710"
     CDS             <1..666
                     /locus_tag="VIC30_11710"
                     /inference="COORDINATES: protein motif:HMM:NF023657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HEY7805081.1"
                     /translation="GVYTAADDGVLNPQSIQIVPGAIIPVARNGGPQGESLRPLRSAS
                     DFNTSQLVINDLVMNIKKMLFDDSLPPDNMSARSATEIVQRMKELSQNLGSAYGRLIT
                     EAMTPIVRRVLFVMDELNIIDLPLEVNGMQVKVVPTSPLAQAQNMEDLEKVLQFGQIA
                     AQFGQVGQMAINQEEMIDYIAVKMGVPQSLLTTSTEREEMVQQMQQQMQAQQQQAMIP
                     PEA"
     gene            667..930
                     /locus_tag="VIC30_11715"
     CDS             667..930
                     /locus_tag="VIC30_11715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805082.1"
                     /translation="MEGWDSLREADNAGLAQNKIAQDDLDLAFVRCFATEAGAEVLEY
                     LKSVTLNQPSWYPGEDPSHGFAREGQNSIVREIVRRIERGRNQ"
     gene            942..1739
                     /locus_tag="VIC30_11720"
     CDS             942..1739
                     /locus_tag="VIC30_11720"
                     /inference="COORDINATES: protein motif:HMM:NF017233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805083.1"
                     /translation="MENDAENTEVSAEESGSLLQPQLETGEEAQPTEMPHIQESDVQG
                     VADDQIDWGDKPEWMPDQFWDSENGPDLESMAKSYQELRAKMSAGKHKAPKDGAYDIA
                     SLKDHGVAEDDALLSEFKGFAKENGLSQDQFDQITQMYMQHVGTLMDQVETDREAEIA
                     KLGPKGDKVIGSLNQWLTKLGNSGALSAEEVDSIAGKADNATFIMALNKIRQSYGEQT
                     IPDTSIQEGNGTTKADLDAMVGDPRYGKDMGYTQMVERKFMEFFGEA"
BASE COUNT          537 a          452 c          541 g          422 t
ORIGIN      
        1 ggtgtgtaca ccgcggccga tgatggtgta ttgaatccgc agtcaatcca gattgtgcct
       61 ggtgcaatta ttcctgtagc gcgtaatggc gggccacagg gtgagtcact acgcccattg
      121 cgttctgcgt ctgacttcaa tacgtcgcag ctggtgatta acgacttggt aatgaacatc
      181 aagaagatgc tgttcgatga ttcgttgccg cctgacaaca tgtcagctcg ctctgcgaca
      241 gagatcgtgc agcgcatgaa ggagctgtct cagaacctag gctcagcgta tgggcgtttg
      301 atcactgagg cgatgacgcc aatcgtgcga cgtgtcctgt tcgtcatgga tgagctcaac
      361 atcattgacc tgccgcttga agtaaacggt atgcaggtca aggttgtgcc gacctctccg
      421 ctggctcagg ctcagaacat ggaagacctg gagaaggtct tgcagttcgg tcaaattgcg
      481 gcgcagtttg gtcaggttgg tcagatggca attaatcaag aagagatgat tgattacatt
      541 gcagtcaaga tgggcgtacc gcagtcattg ctcaccacct ctacagagag agaggagatg
      601 gtgcagcaga tgcagcagca aatgcaggct caacaacaac aggcgatgat accgccggag
      661 gcataaatgg aaggttggga ttccctacgc gaggcagaca atgcaggtct ggctcaaaac
      721 aaaatcgcgc aagatgacct cgatcttgcc tttgttcgct gttttgcgac ggaggccggt
      781 gctgaggttc ttgaatactt aaagtcagtg acgctcaatc agccgtcctg gtacccgggc
      841 gaagacccaa gtcacgggtt cgcccgtgaa ggccagaaca gcattgtgcg cgagatcgtg
      901 cgtcgcattg aaagaggtcg aaaccaatga gtgaggcagt catggaaaat gatgcagaaa
      961 acacagaagt atcagcggaa gagtctggtt cgttactgca accgcagcta gaaacaggcg
     1021 aagaagctca gccaacagag atgccacaca tccaagagag tgatgtgcaa ggcgttgcag
     1081 atgatcagat cgattggggt gataagcctg agtggatgcc tgaccagttt tgggactcag
     1141 agaacggtcc cgatcttgag tcgatggcca agtcgtatca ggagctacgc gctaagatgt
     1201 cggctggcaa acacaaagca ccaaaggacg gtgcgtatga cattgcatca ttgaaagacc
     1261 atggcgtcgc agaagatgat gcgcttctca gcgagttcaa aggctttgcc aaggaaaatg
     1321 gattaagtca ggaccagttt gaccagatca cacagatgta catgcagcat gtgggtacgc
     1381 tcatggatca ggtcgagaca gatcgagaag cagagattgc taaacttggg ccaaaaggcg
     1441 acaaggtcat cggcagctta aaccagtggc tcacaaagct gggcaactct ggcgcactat
     1501 cagctgaaga agtcgattcg attgccggca aggcagacaa tgcgacgttc atcatggcgc
     1561 tcaacaaaat tcgtcagtca tatggcgagc aaaccatccc tgacacatca atccaagaag
     1621 gcaatggcac aaccaaggct gacctggatg cgatggtcgg agacccgcgt tatggcaagg
     1681 atatgggcta tacgcagatg gtcgagcgaa aattcatgga atttttcggc gaagcgtaaa
     1741 caagggggct acattagccc cctctcttta tttgccactg tgcaaaaact gttatatttc
     1801 aaccaaccga taactcagat tcctgagccg gcgacctgac tgatgcggcc cacacggata
     1861 accgatacag gttttaccct taaagaaatt ttttgattgg agaaagtaca atggcagtac
     1921 aaatttcaaa tgcctttgta accttgttcg ac
//
LOCUS       DATBNL010000692         2545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_186256, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000692 DATBNL010000000
VERSION     DATBNL010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186256"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VIC30_11725"
     CDS             <1..348
                     /locus_tag="VIC30_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEY7805084.1"
                     /translation="VVETVADQNIIESTHNYRGLYYVLMGRIAPLEGMGAQEIQLTRL
                     IERASDGEVTEVILATNFTAEGDTTAHYLTEALRARGLNVTRIARGVPAGSEIEYVDA
                     GTVAWALMERKPA"
     gene            complement(363..539)
                     /locus_tag="VIC30_11730"
     CDS             complement(363..539)
                     /locus_tag="VIC30_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805085.1"
                     /translation="MSNITNRAATLLEPTRKDQDRLKLQRVLKAGAASAPAAPADASY
                     FEKLRNRVRNRAKT"
     gene            complement(635..1522)
                     /gene="mmsB"
                     /locus_tag="VIC30_11735"
     CDS             complement(635..1522)
                     /gene="mmsB"
                     /locus_tag="VIC30_11735"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HEY7805086.1"
                     /translation="MHTVAFIGLGNMGAPMAANLIDGGTTLRVFDVVSELAKPLQSKG
                     ATACTSAAQACEGAHVVISMLPASEHVAALYLGKDGLLTKLDPDTLVIDCSTIAPATS
                     RQVAQAASTLNLSALDAPVSGGTNGAKHGTLTFMVGGAADALERARPLFGLMGSNVYH
                     AGPAGAGQAAKIANNLVLGIQMIATAEALNLGVANGLDPVVLSDILARSSGRNWAVDT
                     YNPWPGVMDNVPASNQYRGGFAVDLMLKDLGLAIESAEQQHCQTTLGALARELYAQHS
                     ADGHGTLDFSSILKLVQKT"
     gene            complement(1700..2476)
                     /locus_tag="VIC30_11740"
     CDS             complement(1700..2476)
                     /locus_tag="VIC30_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011295731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY7805087.1"
                     /translation="MSTDNADQSPPRLIIEGRVAIIELSRPALANRLSPADLDVLNQH
                     IESVNNQSDVLVLIIRAQGKYFCAGYDIGALGSDDAPSSLYFGQTVDRIEAARPVTVA
                     VVQGGVYGGGTDLALACDFRVGSTAANMFMPATRLGLHFYPGGLRRYVTRLGLDQAKR
                     LFLTAEKLDASQMHQIGFLTSLTDADTVNSTVNSLVQTLTNMAPMALLGVKSHLNRIA
                     NGDLDIPAIEALVRQTEQSADLQEGANAWRDKRAPRFTGR"
BASE COUNT          534 a          685 c          721 g          605 t
ORIGIN      
        1 gtggtcgaga ccgtcgccga tcaaaacatc atcgagtcca cacacaacta tcggggcttg
       61 tattacgtgc tgatggggcg catcgcgccg cttgaaggca tgggtgcgca ggaaatccag
      121 ctcacgcggc tgatcgaacg cgccagcgat ggcgaggtca cagaagtaat tctggcaacc
      181 aacttcacag ccgagggcga caccacggcc cactacctaa ccgaggcatt gcgggcgcga
      241 gggcttaacg tcacccgtat tgcgcggggc gtgcccgcag gcagcgagat tgaatatgtc
      301 gatgccggta cagtggcctg ggcactaatg gagcgcaaac cggcttaggc agtatctaat
      361 tgctaagttt tggcacgatt gcgtactcgg ttgcgcaact tttcaaagta gctggcatcg
      421 gctggtgcgg ccggtgctga tgctgcacca gctttcaaga cgcgttgcag tttcagtcga
      481 tcctgatctt tgcgggttgg ttcgagtaac gtagccgccc tgttggttat gttggacatg
      541 ttggaaatcc tggccattag ctaattttcg atttttgcaa aattggcaag actctggctg
      601 gactttggcg agtctataaa agatgccacc cgactcaagt cttttgcacg agcttcagaa
      661 tgctggagaa atccagggtg ccgtgaccat cggcactgtg ctgcgcgtag agttcgcgag
      721 ccaaagcacc tagggttgtt tggcaatgct gctgctcagc cgattcgatg gccaatccga
      781 gatccttgag cattaaatcg actgcaaatc cgcctcggta ttggttggat gcgggcacat
      841 tgtccatgac acctggccaa gggttatagg tgtcaacggc ccaattgcgt cctgaactac
      901 gtgccaggat gtccgacaaa acgacggggt ccaggccgtt ggccacaccc aaattcagcg
      961 cctcggcagt cgcaatcatt tgaataccaa gtacaaggtt gttggcaatt ttggcggctt
     1021 gaccagcacc agccggtcct gcgtgataga cattactgcc catcaaacca aacaatggtc
     1081 tggcgcgctc tagcgcatcg gcggcgccac caaccatgaa agtcaatgtg ccgtgtttgg
     1141 cgccgttggt gccacccgat acaggggcat ccagagcact caagttaagc gtgctggcgg
     1201 cttgggctac ctggcgcgat gtggctggcg caatcgtgct gcagtcaatc accagcgtgt
     1261 cgggatcgag cttggttagc agcccatctt tgcctaggta gagggcggcg acatgttcgc
     1321 ttgccggcaa catgctgatg accacatggg caccctcaca tgcctgcgct gcactggtac
     1381 atgcggtcgc gcctttgctt tgtaacggct tagccagttc gctcaccacg tcaaataccc
     1441 gcagtgtggt tccaccgtca atgaggtttg cagccatggg tgcgcccatg ttgcctaagc
     1501 caatgaatgc cactgtgtgc ataaccgtct ctcctgtgtg ggcctgatcc gatctcaacg
     1561 tcttttagtg tcgcacgact cgccctgcct gaataggctt gcgttgtttg tgttgtctgt
     1621 ttgtgttgat cgtttgtttt atctttttct ttcgatcgtt ggtttagacc aagcaggttc
     1681 ggatgtcgaa gacggccgat caacgaccag taaaacgtgg cgctcgtttg tcgcgccagg
     1741 catttgcgcc ttcttgcaaa tcagccgatt gctcggtttg gcgcaccagc gcctcgatgg
     1801 ctgggatatc caagtcgcca ttggcaattc ggtttaaatg agacttcaca ccaagcaagg
     1861 ccatgggcgc catgttcgta agtgtttgaa ccaggctatt gaccgttgag ttgacagtgt
     1921 ctgcgtcagt cagactggtt aaaaacccga tctggtgcat ttgactggca tcgagttttt
     1981 ctgcggtcag gaacaagcgt ttggcttggt caagccctag gcgtgtgacg tagcgacgca
     2041 agccgcccgg gtagaagtgc agccctaggc gtgtggccgg cataaacata tttgccgctg
     2101 tgctgcccac cctgaaatcg cacgccaagg ccagatcagt gccgccacca tagacgccgc
     2161 cttggacgac cgcgaccgtc acggggcgag ccgcctctat gcgatccacc gtttgcccga
     2221 aatacaacga gcttggtgcg tcatcgctac ccaaagcgcc gatgtcgtag ccggcacaaa
     2281 agtattttcc ctgcgcgcga atgatcaaga ccagcacatc ggactggttg ttcactgact
     2341 caatgtgctg gttcagtacg tcaaggtcag ctggactcaa acggttggct agcgccgggc
     2401 gtgacaactc aataatcgca acccggcctt caatgattag ccgaggtggg ctttggtcgg
     2461 cgttatctgt gctcattgtc tgagatcatt aactgagatc atgatccacg atgcgcagac
     2521 aggagcgtgt cgagtttttt agcgt
//
LOCUS       DATBNL010000693         2669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_88263, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000693 DATBNL010000000
VERSION     DATBNL010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88263"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..1319)
                     /locus_tag="VIC30_11745"
     CDS             complement(102..1319)
                     /locus_tag="VIC30_11745"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003269405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY7805088.1"
                     /translation="MMNVKTLTELAQAGELKGKRVFIRADLNVPFDDQGEITEDTRIR
                     ASVPGIELALKAGAAVMVTSHLGRPTEGEVRPEDSLAPVAKRLQALLGQPVTLVQNWV
                     DVDDGGDGGDGVAVSPGEVVLLENCRCNPGEKKDNAELAQKMAKLCDVYVNDAFGTAH
                     RAEATTHGIALHAPVACAGPLLAAELDALGKALREPARPMVAIVGGSKVSTKLSILQA
                     LAQKVDQLIVGGGIANTFMLAAGLPIGKSLAEPDQVEQAKSVIDMMQARGAAVPIPVD
                     VVTAKEFAGSATASVKDATTVADDDLILDIGPKTTEQLAQILSKAGTIVWNGPVGVFE
                     FEAFANGTKGIAQAIATSDGFSIAGGGDTLAAIAKFGITDDVDYISTGGGAFLEFLEG
                     KTLPAVAALEKRA"
     gene            complement(1319..2329)
                     /gene="gap"
                     /locus_tag="VIC30_11750"
     CDS             complement(1319..2329)
                     /gene="gap"
                     /locus_tag="VIC30_11750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011883251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEY7805089.1"
                     /translation="MAIRVAINGYGRIGRNILRAHYEGGKKHDIEIVAINDLGDPQTN
                     AHLTQYDTAHGKFPGTVGVEGEHMVVNGDKIRVLANRNPAELPWGELEVDVVLECTGF
                     FASKEKASAHLKGGAKKVVISAPGGKDVDATVVFGVNEGVLKADHTVISNASCTTNCL
                     APMVKPLHDKIGLETGLMTTVHAYTNDQVLTDVYHEDLRRARSATMSMIPTKTGAAAA
                     VGLVLPELNGKLDGYAIRVPTINVSIVDLSFIAKRDTTVDEVNAILKEASEGELKGIL
                     EYNTAPLVSIDFNHNPASSNFDATLTKVSGRLVKVSSWYDNEWGFSNRMLDTTVALMG
                     AK"
     gene            complement(2347..>2669)
                     /locus_tag="VIC30_11755"
     CDS             complement(2347..>2669)
                     /locus_tag="VIC30_11755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEY7805090.1"
                     /translation="TGSEVSLALAAQEALSQEGVAVRVVSMPSTDVFDGQDAAYRAQV
                     LPSGIPRVAVEAGVSDFWFKYVGLEGAVIGIDRYGESAPAGDLFKYFGLTAQAVVTAV
                     KKVL"
BASE COUNT          609 a          784 c          688 g          588 t
ORIGIN      
        1 tatgatgatc atcaacgcaa ccggccagtg gcgtagcgcc atggccggtt gtggttaaac
       61 tttgaaggcg attaattaag gcgattaagc cgctacggcg actatgcccg cttctctaat
      121 gctgcaacgg ccggcaaggt cttgccttcg agaaactcca gaaacgcacc accacctgtt
      181 gaaatgtagt ccacgtcgtc ggtgatacca aacttggcga tagcggcgag cgtgtcacca
      241 cccccggcaa tcgagaaccc atccgatgta gcaatggctt gagcaatccc tttggtgcca
      301 ttggcaaagg cttcgaactc aaacacaccc acaggcccgt tccagacgat ggtgcccgcc
      361 ttagaaagaa tctgagccaa ctgttcggtg gtcttgggtc cgatatccag aatcaggtca
      421 tcgtcagcca ctgtggtcgc atctttaacg ctagcggttg ccgacccagc aaactcttta
      481 gccgtaacca catcgaccgg aatcggtaca gccgcaccgc gggcctgcat catgtcaatg
      541 accgactttg cctgctcgac ttgatcgggc tcagccaagg acttgccgat tggtaaacca
      601 gcggccagca taaaggtgtt ggcaatgccg ccaccgacga ttagctgatc aaccttttgt
      661 gcgagtgctt gcagtatcga cagtttggtc gatactttag agccacctac gatggctacc
      721 atcggccgcg ctggctctcg caatgcctta cctagcgcat cgagctctgc cgccagcaaa
      781 ggaccggcac aagccacggg tgcatgcaaa gcaatgccgt gggtcgtggc ctcagcacgg
      841 tgagcagtgc caaacgcatc attgacgtag acatcgcaaa gcttggccat tttctgggcc
      901 agctcagcgt tgtctttttt ctcgccaggg ttacagcggc agttctctag caagaccacc
      961 tcgcctggcg acacagccac tccatcgccg ccatcgccgc catcgtcaac atcgacccag
     1021 ttttgtacca gcgtcacggg ttgccccagt aacgcctgga gtcgcttagc cacgggtgcc
     1081 aagctgtctt caggtctgac ttcgccttcg gtggggcgcc caaggtggga ggtcaccatg
     1141 acagcagcac ccgcctttaa ggcaagctca ataccgggca cggatgcccg gatacgcgtg
     1201 tcctcggtga tctcgccctg atcgtcaaac ggcacgttta agtcggcacg aataaagacg
     1261 cgcttgcctt tgagctcacc cgcttgagca agctcggtca gggttttgac attcatgatt
     1321 acttggcacc catcaaagcc acggtggtgt cgagcatgcg gttgctaaag ccccactcgt
     1381 tgtcgtacca ggatgagact ttcacgagcc ggcctgatac tttggtcagc gtggcgtcaa
     1441 agttgcttga ggctgggttg tggttaaagt caatcgacac cagtggtgcg gtgttgtact
     1501 caagaatacc cttaagttca ccctcggatg cttctttgag aatggcgttg acctcatcaa
     1561 ctgtcgtgtc gcgcttggca ataaacgaca agtcaacgat cgacacgttg atggtaggta
     1621 cgcgaatggc gtaaccatcg agcttgccat taagttcggg tagcaccaag ccaacggcag
     1681 cagctgcgcc ggtcttagtc gggatcatgc tcatggtggc tgagcgggcg cggcgcaaat
     1741 cttcgtgata gacgtcggtg agcacctggt cattggtata agcatgaaca gtcgtcatca
     1801 gacccgtttc caggccaatc ttgtcatgca aaggcttaac catgggagcc aagcagttgg
     1861 tggtgcaaga tgcattagaa atcacggtgt gatcggcttt cagaacgcct tcgttgacac
     1921 caaacacaac cgtggcatca acatctttgc cacccggcgc agaaatcacc actttcttgg
     1981 caccgccttt caagtgggct gatgctttct ctttgctcgc aaaaaagccc gtgcactcga
     2041 gtaccacgtc gacctcgagc tcaccccatg gcaattcagc cgggttgcgg ttggccagca
     2101 cacgaatctt gtcaccattg accaccatgt gctcaccctc tacacccacg gtgccaggaa
     2161 acttgccatg ggccgtgtca tattgggtga gatgggcatt ggtctgagga tcacctaggt
     2221 cgttgatcgc aacgatctcg atatcatgct ttttgccgcc ctcgtaatgt gcgcgcagaa
     2281 tattgcgccc aatccgacca taaccgttga ttgcaacacg aattgccatg acaccaatct
     2341 ccttgtttat agaacctttt ttacggcagt cacaacggcc tgcgccgtca gaccaaaata
     2401 cttgaacaaa tcacctgcgg gtgcggactc accatatcga tcgataccaa tcacggcacc
     2461 ctcgagtccg acgtacttga accaaaagtc gctcacacca gcttctacgg ccacgcgagg
     2521 gatacccgac ggcagaactt gtgcccgata ggccgcatcc tgaccgtcaa agacgtcggt
     2581 actcggcatg gaaaccacac gaaccgcaac gccctcttga gacaaggcct cttgggcagc
     2641 cagtgccaaa cttacctctg agccagttg
//
LOCUS       DATBNL010000694         2717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_197041, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000694 DATBNL010000000
VERSION     DATBNL010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197041"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /locus_tag="VIC30_11760"
     CDS             <1..929
                     /locus_tag="VIC30_11760"
                     /inference="COORDINATES: protein motif:HMM:NF016103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HEY7805091.1"
                     /translation="SMSQQQNMDRQLGRLAVALRFERAVARAVALAVGAVAVSAVVAL
                     GSLVVAPAANAQDASSAQSPIWLMGEVHDNPEGHAYRLRDLQAAVTADWRPALLMEQF
                     NVDRQDDLTQAWQTCKQAQCVIDAAGDKGWDWGLYKPLIQLALAYRLPLVAANVSREQ
                     LGQVMQQGFGAVFDENTIKAYGLDKPLPTDWLEGQRVAIEQGHCNMLPAEMIDPMVNA
                     QTARDVMFAKLIDEYAPQGVVLIAGNGHVRKDLGVYGWLPDDLKPEVRVFGYVEPNGI
                     SSTWYDEVRVVPAHPRPDPCEAFKRSRQKQQG"
     gene            complement(1205..2686)
                     /locus_tag="VIC30_11765"
                     /pseudo
     CDS             complement(1205..2686)
                     /locus_tag="VIC30_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013236296.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
BASE COUNT          613 a          690 c          800 g          614 t
ORIGIN      
        1 tttctatgtc acaacaacag aatatggatc gccaattggg aagattagcg gttgcactta
       61 ggtttgaacg tgcggttgca cgtgcggttg cacttgcagt tggtgcggtt gctgtcagtg
      121 cagttgtggc actcgggtca ctggttgtgg cgccggcagc taatgcacag gatgcaagtt
      181 ctgcgcaatc gcccatttgg ttaatgggcg aggttcatga caatcctgaa ggccatgctt
      241 accgattacg tgacctgcaa gctgcagtga ctgccgattg gcgaccggcg ctgctcatgg
      301 agcagttcaa tgtcgatcga caagatgatc tcactcaagc atggcagacg tgtaagcaag
      361 cacagtgtgt cattgatgcc gccggcgaca agggttggga ctggggtctc tataaaccac
      421 tgattcaact cgccttggcc tatcgtttac cgctagttgc cgccaatgtc tcacgcgaac
      481 aactcggcca agtcatgcag caagggtttg gcgccgtgtt tgatgagaac accatcaaag
      541 cctatggttt ggacaagccg ttgccgaccg attggctcga aggacaacgt gtggccattg
      601 aacaagggca ctgcaacatg ttgccagccg aaatgattga tcctatggtc aatgcgcaaa
      661 ccgccagaga tgtcatgttc gccaagttaa tcgacgagta tgcgccacaa ggtgtggtgt
      721 tgatcgcagg caatggccat gtacgcaaag acctaggtgt ctacgggtgg ttgccagatg
      781 acctaaagcc cgaggtgcga gtgtttgggt atgtcgagcc caacggcatc agttcaacct
      841 ggtatgacga ggtaagggtg gtgccagcac acccacgtcc tgatccgtgt gaggctttta
      901 aacgtagccg tcaaaagcag caaggctaac aaattcggct aagagggtcg ttctggcaag
      961 acagcaacag acagatagca atagaacaac aaatggccag gacgtttggc gccctggttg
     1021 gcgatgggag agtaaaggtg cgattcgtga aatggttagg cgtgtgtttg gtggccatgg
     1081 cagtggccgg gtgtggtttg aaccctgaag cccaacgcac acccgatggc tttgacccac
     1141 catataacta ctattgatct agtgcggtga cacggccgcg atagccgttg tgtcaccgat
     1201 gtgcttatat cgtaggtggg tgagtgacga tcgacttcag ttgcgcgctg ttgtctttaa
     1261 gcgcactcac gtcaggcaag gggcgagcaa ggctagcttc actggctaaa gccgcttcca
     1321 tggcgctacc gatggcgagc aatctgccat cttcatacag agacccaatc atctgaatac
     1381 caaatggcat gccggcctca tctaatcctg agggtaatga cagagcgggg tgcgtgctca
     1441 tggtcaccac gtaagtcagc gaaagccatt cgtaatagtt acgcatggtt tgcccgtcga
     1501 tcgactcggc ttacagcgtt tgccatggga acggtgtcac gggtgtgact ggcgacagaa
     1561 tgacatcgta ttgctgcatg gcttgagcaa acgcttgcat gatgcgcgtt tgctcaaggt
     1621 gtgcccaggc ccggtcggcc agtgtcatct gctgggccat ttccatgttg gcgcgcacgt
     1681 taggacttaa tgcattggga tctttggcgt actgctcacc catctgtgca atgaacccct
     1741 cagcgcgcat gacatcaaag gcgcggtgcg gatcgccgag ttcgagactg acgggttcac
     1801 aaaccttgac gtgtttggca atggctttaa cgcgctcttc aaacacgcga cggatcatgg
     1861 ggtcaacggc acagcaaccg aagtcagctg tgtaacccac ccgcaactga ctcaggtcga
     1921 tcggtggttg cggccaaatg gtgtgtgggt tgtttggata cgccaatgga tccatgggct
     1981 cgtgtcccag gcatacgcta aacatgagcg ccatgtcctg aatgttgcgt gccatggggc
     2041 caaccacgtt tagaaccgac caaccgagtt tgcgcccgct ttgagaaatc atccccggcg
     2101 atggccgaat accggccacg ccacaataag cggctggaat ccgaagtgag ccacccacat
     2161 cagaacccgt gcacagtggc agcatgtcgg tggctagtgc ggcagctgaa ccgcccgatg
     2221 aaccaccagc attcaagatg gggttaaagg ggttgcccgt ggcaccccag acttgattgc
     2281 gcgtgttggc cccagcaccc atgtctgggg tgttggtttt agtggcgatg atggcacccg
     2341 cggctttcag gcgcgacacc aatgagttgt cctcggtcgg tatatggtca cgaaacccgg
     2401 tgttaccaaa ggtggtcaat agacccgctg tttcggtcag gtctttaatg ccaaccggta
     2461 agccatgcaa agggccaaga gggtcaccgg ccatgaccgc tgcctcagcg gttttggctg
     2521 cgttgcgagc gcgatcaaag tcggtggcgc acagggcgtt aatacctggg ttgacccggt
     2581 tcatttgctg cacgaaggcg tcgagtactt caactggcga cagtgtcttt tgtccgatat
     2641 gacgacgtaa ctcaacggct gataaagagg tgatgtctgg ctgcatgaac ccgaggctcc
     2701 tattagccat ggtttca
//
LOCUS       DATBNL010000695         3437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_68175, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000695 DATBNL010000000
VERSION     DATBNL010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68175"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..944)
                     /gene="pilO2"
                     /locus_tag="VIC30_11770"
     CDS             complement(<1..944)
                     /gene="pilO2"
                     /locus_tag="VIC30_11770"
                     /inference="COORDINATES: protein motif:HMM:NF018562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4b pilus protein PilO2"
                     /protein_id="HEY7805092.1"
                     /translation="MTQEQSFKEQLFSEQSWLWRDEQTKLTWVFGMRWLPALGSKGKR
                     HLYRNLRQQGLGWAVTHGRALSLVGVQAQPSTAKLQRQQVSAAVAFAHAHPQGVHALC
                     LQISEVGVWLVAAAQGCVLSETDRWFETLEQAHVALQTLRERHDPMSYEELLWSPHDS
                     ASEAATTPSFLRGAKGKACQFQKLPSGQSAWPLVAAFGCLGLAALLVVHRLWIDPVRS
                     NRSAAVAAPEVKEPVSVKVHDAMALRTVFKAWQQLPVDPAGWLLQGVRCRVGGGSADC
                     TATYKRDQPNADNNGLAKHVPKHWRLTPQSLDLANYRRR"
     gene            complement(946..2556)
                     /locus_tag="VIC30_11775"
     CDS             complement(946..2556)
                     /locus_tag="VIC30_11775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805093.1"
                     /translation="MRKTRIFSGFQIGLCACLMLSGCAIDELSRQTRDYTRGQHQSSQ
                     QTVARFEQDVARAGVIDRAQTRVSKPWVSGKPVPLAREFDLPPALRANLKTTLIFKRQ
                     AKSLSELASRIAQATQIPVRVSPEARLPVEHFAPRTATAAGALPAATTVLHRLPAGTQ
                     PLTRILDHVAATHQINWAFDGKAIEFFRTRTRVFDIRALSVSAKAAMRLGKSSSQSNR
                     GFDSSAQTELTLSDQTVMQDIAKQLEPFLTRAAVVAAQPGSLSSVVITDTPRALDAVE
                     QYLDRLNRRLSRRVRLVFEQVTVTRDQKHQQGIDWQLAIASELGGLDMSGGHGGTAPT
                     LADISGPGLLPGMSTGLVLKAVSRYADVVRHTTVPVMTLNRRPVTHAVRSTFTYVDQV
                     KSVSTTTSDKKEQNALPGIAVNQKRETVGAFLTLVPDVQDDGQVLLSVAFDSTVAMPL
                     KTLSFGSAQNQLQVQQLDLRGNGTVQQVVVYPGRPTLIAGFEQQDNEANQTRRAPHAP
                     KLFGGNDEVNRQSTMTLIFVTAQVQEGG"
     gene            complement(2553..3101)
                     /locus_tag="VIC30_11780"
     CDS             complement(2553..3101)
                     /locus_tag="VIC30_11780"
                     /inference="COORDINATES: protein motif:HMM:NF022136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcpQ domain-containing protein"
                     /protein_id="HEY7805094.1"
                     /translation="MAPRQVFSDQGRIWLQWHPHQAVPTVFVQDLGGWRVIEQLPQGQ
                     YTVVDGPWRRLRFQGGHLQAMAVYQPSAPAAAPCPDTTPRGAGFEVRVADGTIRQTLR
                     RWSEQANWFFDDAHWSLNVDFPITAPATFNADYEEAVRGLLESTRVSGQSDKPCFYAN
                     HVLRVIPAAQSCDPMANQGDRP"
BASE COUNT          785 a         1032 c          919 g          701 t
ORIGIN      
        1 cgacgccggt aattggccaa atccagtgac tgtggcgtca agcgccagtg cttgggcacg
       61 tgtttggcca gtccattgtt atcggcattg ggttgatcgc gcttgtaagt ggctgtgcaa
      121 tcggccgagc caccacccac gcggcacctg acaccctgca acaaccaacc cgccggatca
      181 accggcaact gctgccaggc tttaaatacc gtgcgcaagg ccatggcatc atgcaccttg
      241 actgacaccg gctctttgac ttcaggagct gctacagctg ctgaccggtt agacctcacg
      301 ggatcaatcc aaagacgatg caccactagc aacgcggcca aaccgagaca accaaaggcc
      361 gcgaccaaag gccaggccga ttgaccagaa ggcaactttt gaaactgaca cgccttgccc
      421 ttagcacctc gtaaaaatga tggtgtggtt gcggcctcag aagccgagtc atgcggcgac
      481 cacaacaact cttcgtaact catcgggtca tggcgttcac gcaacgtctg caacgctaca
      541 tgtgcctgct caagtgtctc aaaccagcga tcggtttcac tcaacacgca gccttgcgct
      601 gcggcaacca accagacccc aacctcactg atctgcagac aaagcgcatg cacgccttgc
      661 gggtgcgcgt gggcaaacgc cacggcggca cttacctgct ggcgttgcag cttggctgtg
      721 ctcggttgcg cttgcacacc cacaagactt aaggcccgcc cgtgcgtgac cgcccaaccc
      781 aagccttgct ggcgtaaatt acggtagagg tgacgcttgc ccttactgcc tagcgctggc
      841 agccaacgca tgccaaacac ccaggtcaac ttggtttgtt catcacgcca caaccaagat
      901 tgctcactga acaactgctc tttgaatgac tgctcctgcg tcacgtcagc caccctcttg
      961 aacttgcgct gttacaaaga tcagcgtcat ggtgctttgt cggttgacct cgtcattgcc
     1021 accaaacaac ttgggcgcat gcggtgcccg acgagtctga ttggcctcgt tgtcctgttg
     1081 ctcaaaaccc gcaatcaagg ttggacgacc cggatacacc accacttgct ggaccgtgcc
     1141 attaccccgt aagtcgagtt gctggacttg caactggttt tgagctgagc caaaggagag
     1201 cgtcttaagt ggcatggcca cggtgctatc aaaagccact gacaaaagca cctgaccgtc
     1261 gtcttgcacg tcgggtacga gtgttaagaa tgccccaacg gtctcgcgct tttggttaac
     1321 cgcaatgccc ggcagcgcgt tttgttcttt cttgtcagat gtggtggtgc tcaccgactt
     1381 gacctgatcg acataggtaa acgttgatcg caccgcgtgg gtaactggac gacggtttaa
     1441 tgtcatcaca ggtacggtcg tgtgacgcac cacgtcggca tagcgagaca ccgccttgag
     1501 caccagaccg gtgctcatgc cgggcagcaa cccagggccg ctgatgtcag ccaacgttgg
     1561 cgccgtgccc ccatggccac cggacatatc gagcccacca agctcagagg caatcgccaa
     1621 ttgccagtca ataccttgtt ggtgcttttg gtcgcgcgtg actgttacct gctcaaacac
     1681 cagacgaaca cggcggctta accgacggtt taagcgatca aggtactgtt caaccgcatc
     1741 gagtgcgcgc ggcgtgtcag tgatcacaac cgaactcaaa ctgcccggtt gtgccgctac
     1801 cacggcggct ctggttaaaa atggctcgag ttgcttggca atatcttgca tgaccgtctg
     1861 atccgacagc gtgagctcag tttgtgcaga actgtcaaac cctcgattgc tctgactact
     1921 ggatttgccc aaacgcatgg ccgctttggc tgagactgag agcgcccgaa tatcaaacac
     1981 gcgtgtgcgc gtcctaaaaa attcaattgc tttgccatca aatgcccagt tgatctggtg
     2041 agtcgccgcc acatgatcca aaatccgcgt caaaggctgt gtcccggctg gcaatcgatg
     2101 caaaacggtc gttgccgcgg gcaacgcgcc ggcggcagtg gcggtacgtg gcgcaaaatg
     2161 ctcaaccggt aatcgggcct ccggactgac acgcaccgga atctgggttg cttgagcaat
     2221 tcgactggca agctcagaca atgacttggc ctggcgctta aaaatcaacg tggttttaag
     2281 gttggctcgc aaagccggcg gcagatcaaa ttcacgggcc aaaggcaccg gtttgccgga
     2341 gacccaaggc ttactcaccc gcgtctgggc tcgatcaatc acgcctgcgc gtgccacatc
     2401 ctgctcaaag cgcgccaccg tttgttgact cgactggtgt tgaccacgcg tgtaatcccg
     2461 ggtttggcgg ctgagctcgt ctatcgcgca acccgacaac atcagacacg cgcacaggcc
     2521 aatctggaaa ccggaaaaga ttcgggtttt tctcatggac ggtctccttg gttggccatg
     2581 ggatcgcacg actgcgccgc tggaatcacc cgcaagacgt gattggcata aaagcaaggt
     2641 ttgtcagact gcccagatac ccgagtcgac tcaagcaagc cacgcactgc ctcctcgtag
     2701 tcggcattaa aggttgctgg cgcagtaatc gggaaatcca cattcaaaga ccaatgtgca
     2761 tcatcaaaaa accagttggc ttgctcggac catcgacgca gtgtctggcg aatcgtgccg
     2821 tcagcaaccc gtacctcaaa gcccgcgccg cgcggtgtgg tgtcggggca tggcgctgcc
     2881 gctggcgcgg aaggttgata caccgccatg gcttgtaaat gtccaccttg gaatctgagc
     2941 cgccgccatg gtccatcgac cacggtgtat tggccctggg gtagctgctc gatcacgcgc
     3001 cagccaccaa gatcttgcac gaagacggtg ggcaccgcct gatgcggatg ccattgcaac
     3061 cagatgcgcc cttgatcaga gaacacctgc cgcggggcca cccgtcggtc tccactgagg
     3121 tgccagttga agtccgggtc acccaaaatg gttggtgtgt gagaatgcgc ctgattcagc
     3181 tcaggtagtt gggtgtcatg tacgacacaa cctgcaagca agagggcaag actggcggca
     3241 agaccaaccc atcggcgaca tgtttgcata aatgctttcc tttttgacaa ggcaagcatc
     3301 ttgcgtcatt cagcgctaac aaacaattgt gtagattacg cagacgcgca cgaaccacca
     3361 gataggtgca cgcgatcagc caccacagtc agcaaccaca gccagcgaat gccatcaacg
     3421 actgaagcgc ccaacca
//
LOCUS       DATBNL010000696         1699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_186299, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000696 DATBNL010000000
VERSION     DATBNL010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186299"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /locus_tag="VIC30_11785"
     CDS             <1..472
                     /locus_tag="VIC30_11785"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEY7805095.1"
                     /translation="SLLQYGPTASVFHRPASVQVAKAFSDPPINLVQAHRTETGVRLP
                     NGQEMPITLPVQAPQALTLGIRANALDLSANANNLQIAGRVDLAEISGSDTFVHVQTE
                     LGPMVAQLTGVHNLALGANLCLNLNPEHVYVFEPDGPLLVAPTLVAPVLVGEVA"
     gene            472..1545
                     /locus_tag="VIC30_11790"
     CDS             472..1545
                     /locus_tag="VIC30_11790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018907390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7805096.1"
                     /translation="MAEIRLDLAHAYHPNPQRDEDYALLPLKMTFRDGGAYALLGPSG
                     CGKTTMLNIISGLLQPSQGHVWFDEEDVTQASPQKRNIAQVFQFPVIYDTMTVAENLG
                     FPLKNRKVPKDQITKRVGEIAEMLEMSHQLDMRAAGLSADQKQKISLGRGLVRPDVSA
                     VLFDEPLTVIDPHLKWQLRRKLKQIHHELKLTLIYVTHDQVEALTFADEVVVMTRGKA
                     VQVGTAEALFERPAHTFVGHFIGSPGMNFLPVHINGEICSVHGHLVTIPDSVKLPEHA
                     TKIGIRPEYLRVSPTEQPGTLKAGVTQVQDVGTYILVTCQVDQTPVRVRLSPQSERPE
                     PGHVVHLHLIDSHTCFYQDEELV"
     gene            1545..>1699
                     /locus_tag="VIC30_11795"
     CDS             1545..>1699
                     /locus_tag="VIC30_11795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007831603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY7805097.1"
                     /translation="MNPTDKPSNQKAWLLIMPVLICVAFSAILPLMTVINYSVQDIIS
                     PTRRVFVG"
BASE COUNT          407 a          491 c          421 g          380 t
ORIGIN      
        1 cagcctgctg cagtatggtc cgacagcctc ggtgtttcat cgccctgcct cagttcaagt
       61 ggccaaagcg ttcagcgatc ccccgatcaa tctggttcag gcgcaccgca ctgagacagg
      121 tgtgcgcctg ccaaacgggc aagaaatgcc aatcacatta cctgtccaag caccccaggc
      181 actaacgctc ggtattcgtg ccaacgcgct agacctgtct gcgaacgcaa acaacctgca
      241 aatcgccggg cgcgtcgact tggccgaaat atctggttcc gatacgtttg tgcatgtgca
      301 aaccgagctc ggtccgatgg tggctcaact aacaggtgtt cacaatttgg cgcttggcgc
      361 caatctttgt ctgaacctga accccgagca cgtctatgta tttgaaccgg acggtccgtt
      421 attggtagca ccgacactgg tggcaccagt actagttggc gaggtggcgt aatggctgaa
      481 atcagactcg atttagcgca cgcctaccac cccaacccgc agcgcgatga ggactacgcc
      541 ttattgccgc taaaaatgac gtttcgtgac ggtggggctt atgccttgct cggcccctct
      601 ggttgcggca aaaccaccat gctcaacatc atttctggcc tgctgcagcc atcacaggga
      661 cacgtctggt ttgacgaaga ggacgtcacc caagcctcgc cacaaaagcg caacatcgcc
      721 caagtgtttc agttcccagt gatctacgac accatgacgg tggccgagaa ccttggcttt
      781 ccattgaaaa accgcaaggt acccaaagat caaattacta agcgggtggg cgaaatcgcg
      841 gaaatgctcg aaatgagcca tcagctcgac atgcgtgcag ccgggctttc tgccgaccaa
      901 aaacagaaga tttcactggg acgtggactg gtgcgcccgg atgtctcggc ggtgctgttc
      961 gatgaaccgc tcacggtcat tgacccccac ctgaaatggc aactgcggcg caaactcaaa
     1021 caaatccatc acgaactcaa actgacatta atttatgtaa cgcacgacca agtcgaagcg
     1081 ttgacctttg ccgacgaggt agtggtgatg acgcgcggca aggccgtcca agtcggtact
     1141 gccgaagcct tgtttgaacg acccgcgcat accttcgtcg ggcactttat tggctcgcct
     1201 ggcatgaact tcctacccgt acacattaat ggggaaattt gcagcgtaca tggccatcta
     1261 gtcactatcc ctgactcagt caaactgcca gaacacgcca ccaaaatcgg cattcgacct
     1321 gagtatttgc gtgtctcgcc cacagaacaa cccggcaccc tgaaagctgg tgtcacccag
     1381 gtacaagatg taggcaccta cattctcgtg acatgtcagg tagatcagac accggtacgc
     1441 gtaaggctta gcccacaatc tgagcgccct gaacccggtc atgtggtgca tttgcacctt
     1501 atcgattcac acacttgctt ctatcaagac gaggaactgg tctgatgaac cctactgata
     1561 aaccatcgaa ccagaaggct tggttgttga tcatgccagt gcttatttgc gtggcgtttt
     1621 ctgcgatttt gccgctgatg actgttatta actattcggt acaggacatc atttcaccca
     1681 cacgtcgcgt ctttgttgg
//
LOCUS       DATBNL010000697         3226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_47434, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000697 DATBNL010000000
VERSION     DATBNL010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3226
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47434"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VIC30_11800"
     CDS             <1..474
                     /locus_tag="VIC30_11800"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY7805098.1"
                     /translation="PDEQVMADLDACLVWAGLHGGDLMRVYATGFCWGGRVTWLYAAH
                     QAMLKSAVAWYGRLTAGHGPLHVTHPIDVVDRLKAPVLGLYGEKDAGIPVTDVHAMQA
                     ALLKGSDKAMASEIRLYENADHGFFADYRPMYQAKAAKDGWQRCLAWFRQHPPAQ"
     gene            complement(533..1405)
                     /gene="htpX"
                     /locus_tag="VIC30_11805"
     CDS             complement(533..1405)
                     /gene="htpX"
                     /locus_tag="VIC30_11805"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEY7805099.1"
                     /translation="MKRIALFLGTNLAILIVLGIVLNITGAHRFITQEGLDLQTLLVF
                     SAIIGFGGSFISLLVSKPIAKFSTGAKVIDPQAPGNTREAWLVQTVHQLADKAQIGRP
                     EVAIYEGAPNAFATGAFKNNALVAVSTGLLQGMTEEEVTAVLGHEVAHIANGDMVTLT
                     LIQGVLNTFVVFFARIVGYFVDRVILKNDRGFGIGYFAAVIVSEIIFGILASIIVAWF
                     SRQREYRADEGSARLLQSREPMIKALARLGNMTPGELPRSFEASGISGGKGIGALFAT
                     HPPIEQRIEALRKL"
     gene            complement(1544..2692)
                     /locus_tag="VIC30_11810"
     CDS             complement(1544..2692)
                     /locus_tag="VIC30_11810"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY7805100.1"
                     /translation="MTELGRKSHVSPAMTGLSPSTYFDEQLLAKERARIFDQSSIYLT
                     HQKTMPNPSDWRALPQENNARAMVHGKQGIELISNVCRHRQAIMLGGETGNVAGPVNL
                     SGNLSATGGNIVCPLHRWTYDETGQLLGAPHFEQTPCLNLKRYPFKECHGLLFEGPRN
                     PASDMANLFQRPEFDFSNYVFDHVEVHPCHYNWKTFIEVYLEDYHVEPFHPGLGQFVS
                     CADLHWEFAPYYSVQRVGVHRALSQPGTPAYKTWHDKLLEFRQGQAPDFGAIWVTYFP
                     THMIELYPHVLVLSTLYPVSPQETVNVVEFYYPEEIAEFEREFVEAQQAAYMETAVED
                     DEIAERMDAGRRALYERGDVEMGPYQSPMEDGMQHFHEWYQGLMQDPS"
     gene            2870..3139
                     /locus_tag="VIC30_11815"
     CDS             2870..3139
                     /locus_tag="VIC30_11815"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018439743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY7805101.1"
                     /translation="MATKPHAPDSQVPDIPDRFEEAIAQLESIVASMESGQLSLQESM
                     TAYERGVALARACQVQLQQAEQQVKVLEQDLLRPMDAPAASTDSE"
BASE COUNT          755 a          813 c          914 g          744 t
ORIGIN      
        1 cctgacgagc aagtcatggc cgatctagat gcttgcttgg tctgggctgg gttgcatggt
       61 ggtgatttaa tgcgcgtgta tgccacgggg ttttgttggg gcgggcgcgt cacttggctg
      121 tatgccgctc accaagccat gctcaaatcg gccgttgcct ggtacgggcg cctgaccgca
      181 ggtcatgggc ctttgcacgt gacgcatcca attgatgtgg tcgatcgtct gaaagcgcct
      241 gtgctcggtc tgtacgggga gaaagatgct ggcattcctg tgacggacgt gcatgccatg
      301 caggcggcac ttctaaaggg ctcggacaaa gcaatggcga gcgaaatccg tctttatgaa
      361 aacgccgatc acggtttctt tgcggactat cggccgatgt atcaagccaa agccgccaag
      421 gacggttggc agcgatgcct cgcttggttc aggcagcatc cgccggctca atagggctga
      481 ggggttacgg ggtaacgcag tcagtgcatt gagcgtagtc cggcagcgag ctctagagtt
      541 tgcgcaacgc ctcaatgcgc tgttcgatcg gtgggtgggt cgcaaacaaa gcgccgatgc
      601 ctttaccacc actaatgccg ctggcttcaa agctgcgcgg cagttcaccc ggggtcatgt
      661 tgccgagtct tgcgagcgct ttgatcatgg gctcacgcga ctgcagcaag cgcgccgaac
      721 cctcatcggc acgatattca cgttggcgtg aaaaccacgc cacgatgatg cttgccaaga
      781 tcccaaagat gatctcagac acgatcaccg cggcaaagta gcctatgccg aacccacggt
      841 catttttaag aatcacgcga tcaacgaaat agcctacgat tcgcgcaaaa aagaccacga
      901 atgtgttgag tacgccctga attaaggtca gagtcaccat gtcaccgttg gcgatgtgag
      961 ccacttcgtg gccgagcacc gccgtgactt cctcttcggt catgccttgc aacaaaccgg
     1021 ttgatacggc taccaacgca ttgtttttaa aagcaccggt ggcaaaggcg ttgggtgcac
     1081 cttcgtagat agccacctca ggacgaccaa tttgcgcttt gtcagcaagt tgatgcacgg
     1141 tttgcaccaa ccacgcttcg cgcgtgttgc cgggcgcttg aggatcaatg accttagcgc
     1201 cggtactgaa cttggcaatc ggtttgctaa cgagtaacga gatgaatgaa ccaccaaagc
     1261 cgataatcgc ggaaaacacc aggagtgtct gcaggtctag accctcttgg gtgatgaagc
     1321 gatgcgcgcc ggtgatattg agtacgatac ccaggacgat caggatggcc aggttggtgc
     1381 caaggaataa agcaatgcgt ttcataggtt tatgtgaagc gtttcaatta aatgatgaac
     1441 agttgaataa ccaattgagg ttgatattag acgaaaaaaa tgaccggcgg ttcaatcaaa
     1501 ccgccggtca ttgtggatac actgactgct agtaggggtt tagtcaggac gggtcttgca
     1561 tcaagccctg gtaccactca tgaaagtgtt gcatgccatc ttccatgggc gactggtagg
     1621 gacccatttc aacgtcgccg cgttcgtaca atgcgcgtcg accggcatcc atgcgctcgg
     1681 cgatctcatc gtcttcgact gccgtctcca tgtaggccgc ttgctgtgct tcgacgaact
     1741 cacgctcaaa ttccgcgatt tcttctgggt agtagaactc gacgacattg accgtctctt
     1801 gtggtgaaac gggatacagc gtggaaagca ctagcacatg cggatagagt tcgatcatat
     1861 gggtggggaa atacgttacc caaatagcgc caaagtctgg tgcctgtcct tgacggaact
     1921 ctagcagttt gtcgtgccag gttttgtagg cgggcgtgcc aggctgagac aacgcacggt
     1981 ggactccaac acgctgaacg ctgtagtagg gtgcaaactc ccagtgcaag tcagcacagc
     2041 tgacaaactg tccgagtccg ggatgaaagg gctcgacgtg atagtcctcg aggtagacct
     2101 cgatgaacgt tttccagttg taatggcaag gatgaacctc gacgtggtcg aacacgtagt
     2161 ttgagaaatc aaattccggt cgttggaaca agttcgccat gtcacttgcc gggtttctgg
     2221 gaccttcaaa caacaaaccg tggcattctt tgaacgggta gcgttttagg ttcaggcacg
     2281 gcgtttgctc aaaatgcggt gcgcccagca gttggccagt ctcatcatat gtccagcggt
     2341 gcaaggggca aacgatgttg ccgccagtcg ctgaaaggtt accgctcaga ttgactgggc
     2401 cggcgacgtt accggtttca ccgccgagca tgattgcctg acggtgacga cagacgttgg
     2461 agatcaattc gatgccctgt ttgccgtgaa ccattgcccg ggcgttgttc tcttgcggca
     2521 gtgcacgcca atcgctcgga ttgggcatcg tcttttggtg ggtaaggtag atgcttgatt
     2581 gatcaaaaat acgggcgcgt tctttggcaa gcagctgttc atcaaaatag gtgcttggtg
     2641 acagtcctgt cattgctgga gaaacgtgcg atttgcgacc cagctcggtc atgattccct
     2701 ccgccaaggt gaaaaaaaaa gccagtaggg agaccctttc tggcgcgaag aaaaatcggc
     2761 tatccgatta atctctattg taacccaacg taactatctt agaagaccgt taaaatgaac
     2821 tttttgttaa agacgtttta tgtcaattca gtccctcgga gagtccttag tggcaactaa
     2881 accgcacgcg ccagacagtc aggtacctga tatcccggat cgtttcgagg aagctatcgc
     2941 gcagcttgag tccatcgtgg catccatgga aagtggtcag ttaagtctac aagagtccat
     3001 gacggcttac gaacgcggtg tggcacttgc gcgcgcctgt caggtgcagt tgcagcaagc
     3061 tgagcaacag gtcaaagtgc tcgagcagga tttgttgcgc ccgatggatg cgccggcagc
     3121 ttcaaccgat tccgaatgag tcaactcttg gcaacagaag aaataaacat cgatgattgg
     3181 atcgcagatc gggcgtccca cgccgatcag tgtctagagc ggctgc
//
LOCUS       DATBNL010000698         1762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_77948, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000698 DATBNL010000000
VERSION     DATBNL010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77948"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /gene="bamC"
                     /locus_tag="VIC30_11820"
     CDS             complement(<1..807)
                     /gene="bamC"
                     /locus_tag="VIC30_11820"
                     /inference="COORDINATES: protein motif:HMM:NF018509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEY7805102.1"
                     /translation="MKPGFKLTVLALCVLTLAGCNSIRETLRGDDAVDYQSAQRVDPL
                     SIPPDLTQAAADPRYRAPATGSTTLTQFQSMSQDSATTSQAALTQVAVLPTYPGIEVK
                     RDGNLRWLVIDTPPEQLFPKIEEFWYEMGFNLDVIDPKAGIMITNWAENRAKIPESGL
                     RGLLGGILETVYDSGERDKFRTILERIDGNKSEVFLSHEHMVEVTYGVEQADVKWERG
                     EEDPGLNAAMLARMMVFLGEDVDQARQQMAQAEEQSLKPAVQNNVASDGTI"
     gene            complement(846..1754)
                     /gene="dapA"
                     /locus_tag="VIC30_11825"
     CDS             complement(846..1754)
                     /gene="dapA"
                     /locus_tag="VIC30_11825"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEY7805103.1"
                     /translation="MNSSTTSSPSPRFGGSMVAMVTPMHPDGSLDLASYKQLIDWHVQ
                     EGTDALVVVGTSGESPTVDMDEHAELIQVAVEHAAGRIPVIAGVGANSTAEAIHLAEH
                     ARKVGAHAGLSVVPYYNKPSQEGIYRHFKAIQEAVDLPTVLYNVPGRTVADMSHDTVL
                     RLAEVPGIVGIKDATGDIARAGLLIRDVPEGFQIFSGDDPTAAALIMLGGHGNISVTA
                     NVAPKDMHDLCIAAANGDIQTVRRLNVKLALLNKLLFVEGNPVPVKWALAQMGRMPGG
                     IRLPLCELGQAHHNSLRAALKEVGLL"
BASE COUNT          402 a          512 c          434 g          414 t
ORIGIN      
        1 aatcgttccg tcgctagcca cgttattttg aacggctggc ttaagggatt gttcttcggc
       61 ttgggccatc tgctggcgag cctggtcgac gtcctcacct aaaaacacca tcatgcgcgc
      121 gagcatggct gcgttcaaac cgggatcttc ctcgccacgt tcccacttca cgtctgcctg
      181 ttcgacgcca taagtcactt caaccatgtg ctcgtgcgac aggaatactt cagacttgtt
      241 accatcgatg cgctcaagga tggtacggaa tttgtcacgc tcgccactgt cgtaaaccgt
      301 ctccaaaatc ccgcctagca aacctcttaa gccactttca ggaatcttgg cgcggttctc
      361 ggcccagttg gtaatcatga tgccagcttt aggatcaatg acatcgaggt taaagcccat
      421 ctcgtaccag aactcttcaa tctttggaaa cagctgctca ggtggcgtat cgattaccaa
      481 ccagcgcagg ttgccatcgc gcttgacctc aatgccggga taagtcggca acaccgccac
      541 ttgcgttaat gccgcttggc tggtggtggc gctgtcctga ctcatcgact ggaactgggt
      601 caacgtggtt gagcccgttg ccggtgcgcg gtagcgcggg tcagcggctg cctgcgtcaa
      661 gtctggcggg atgctcagcg gatcgacacg ttgcgcggat tgatagtcaa ccgcgtcgtc
      721 gccccgcagt gtttcgcgaa tagagttgca gcccgccagc gtcaatacac acaatgccag
      781 aaccgttaac ttaaatccgg gtttcaagtt agatacatgt tggctagttc catactgccg
      841 attcatcaca ataaacctac ctcttttagc gctgctctga gcgagttgtg gtgtgcctga
      901 ccaagttcac aaagcggcaa acgaatgcca cctggcatcc gacccatctg tgccaatgcc
      961 cacttcacag gaaccggatt accttcgacg aacagcagct tatttaacaa tgccagttta
     1021 acgtttaggc gtctgaccgt ctgaatatca ccattggctg ccgcaataca cagatcgtgc
     1081 atgtctttag gtgccacatt ggcggtcacc gaaatattgc catgaccacc gagcatgatc
     1141 aaagcagctg ccgtgggatc atcgccacta aaaatctgaa acccttctgg cacatcccga
     1201 atcaaaagtc ccgcacgagc aatatcacca gtggcatctt tgatcccgac gatacccggg
     1261 acttcagcga gtctaagcac cgtgtcgtgg ctcatatcgg ccacagtgcg tccaggcacg
     1321 ttgtagagca ccgttggcaa atccaccgct tcttggatgg ctttgaagtg tcggtaaatt
     1381 ccctcttgag aaggcttgtt gtaatacggc accacagata agcccgcgtg tgcaccaacc
     1441 tttcgtgcat gctcagccaa atgaatagct tcggccgtcg agttagcacc aacaccggca
     1501 atcacaggaa tacgcccagc cgcgtgctcg actgccacct gaatcagctc agcatgctcg
     1561 tccatatcga cagtgggaga ctcgcctgac gtgccaacca ccaccagcgc atctgttcct
     1621 tcttgaacgt gccagtcgat cagttgtttg tagcttgcca gatcaagact gccatctgga
     1681 tgcatggggg tcaccattgc caccatgctg ccaccgaagc gtggactcgg tgaggaagtt
     1741 gtagacgaat tcatgttcaa tg
//
LOCUS       DATBNL010000699         4825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148178, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000699 DATBNL010000000
VERSION     DATBNL010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148178"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1440)
                     /locus_tag="VIC30_11830"
     CDS             complement(<1..1440)
                     /locus_tag="VIC30_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY7805104.1"
                     /translation="MSALRYSALVVMALTLAGCNLALTYEQPDMPVPSSFPAQPELTF
                     DESTGGVTSQTVDAQALAPGLESAAELPWQSFFQDEALRSLIGVALKNNRDLQVAVAR
                     MDEAEAIWGIQRGEMFPTLGAGLAGSRQRGPSPGGGTNVISSQYSAGIAMTAFELDLF
                     GRLRNLSEAAFQQYLATAEGARAVQISLVADTAIQYFRLRLAQVLMNLTEQTLDSRQR
                     SYQLVKARFANGVASEMDAVQAKTLVDAAAADLARYTRDEQVARNALSVLIGQPVPQT
                     LPPPPTFGDIKRLANVPAGLPSELLVQRPDIRAAENQLLAANANIGAARAAFFPNISL
                     TGSVGTASTSLGGLFKSGSGAWAVTPSITTPIFAGGSLQAGLMQAEASQRAAVATYEQ
                     RIQQAFREVADALAGEATLQAQLSARTSETAAAQKFLDLSQARFFNGVDSFLDVQIAE
                     IQLFNARLQQALTGFETISNRINLYKALGG"
     gene            complement(1437..4631)
                     /locus_tag="VIC30_11835"
     CDS             complement(1437..4631)
                     /locus_tag="VIC30_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY7805105.1"
                     /translation="MSHFFIHRPIFAWVVAILITGIGLLALRTMPVAQYPDVAPPAIQ
                     ISATYPGASAAEVSESVTSIIENELNGAKGLLYYESVSDSNGQAQITATFEPGTDPDL
                     AQVDVQNRVSNITAQLPGAVTQQGLQFEQTSAGFLMVVTLSSQSELDATGLADYIKRN
                     VQDPISRVPGVGRFQLFAAPRAMRVWIDPDKLVGLGLSVPEVNNAIRAQNVLIPAGVL
                     GGPPNPESQRVATPIVSDGQLTDVAGFENVVIRANPDGSSVRLKDVARVEVGADNYQF
                     GARLNANPTAAFAVVLAPGANALETAEGVQARMQELSEFFPGDITYEIPYNTAPYVEA
                     SIEQVVHTLFEAMILVFIVMFVFLQNVRYTIIPTLVVPVAMLGAFAVMNTFGFSVNVL
                     TMFAMVLAIGILVDDAIVVVENVERIMAEEGLSPREATVKAMPQISGAIVGITVVLAV
                     VFLPLAFMAGSVGVIYQQFAVAMAVSILFSGFLALSFTPALCATILKPIGKGHHEEKR
                     GFFGWFNRGFHRTTKGYEGMVTHLIHRPGRYMMIFLLLVALMGYLYVRLPGAFLPEED
                     QGYLIVNIELPTGASSTRTMEVINQVEDYFLDQPTTEDIVAVRGFSFNGNGLNAALAF
                     VPLKPFDERQGPGQSAIEVANQATGVLMGSIPDAMVFAVIPPAISSLGNASGFEFRLQ
                     DRSGAGYDGLMQAAGQMLSLAAQDPVLSQVRISGLGPGSQLSLSIDREKLAAMGVTFQ
                     DAASTLGTAMGGQFLGKFPNTGRMQNVWVQSEQAFRNSIADIMKLQARNQKGELVPLS
                     SFVTAQWKQGPSQVVRYNSYDTVRISGSAAPGYSSGEAMQAMQALMTQLPAGFGFEWT
                     GLSYQEIQAGAQAPILMALAIIAVFLVLAALYESWAIPLSVMLVVPLGMLGAVTMMTL
                     LGMNNDVYFQVGMVTVIGLSAKNAILIVEFAKDLHAQGMGLYEAAVEAARLRFRPILM
                     TSFAFILGVVPLTLASGAGAASQQAVGFGVLGGMLAATPFSVIFVPIFFVTVLKFFKT
                     KVKTLHAAPTHRPRDAEAGESAKPTESDTSGRSS"
BASE COUNT         1193 a         1452 c         1250 g          930 t
ORIGIN      
        1 gccgcctaat gccttgtaaa ggttaatccg gttagaaatc gtctcaaatc cggtcaacgc
       61 ctgctgcaat cttgcattaa agagctggat ttcggcgatc tggacatcaa ggaaactgtc
      121 aacgccatta aaaaagcgcg cctggcttag atccaggaat ttttgagcgg cggcggtttc
      181 cgaggtgcgt gcggacagtt gtgcctgtaa tgtcgcctcg ccggctaacg catcagccac
      241 ctcacgaaac gcctgttgga tacgctgttc gtaggtggcc acggccgcac gctgcgatgc
      301 ctcggcttgc atcaaacccg cttgcaaact gccaccagca aaaataggcg tcgtgatcga
      361 cggggttacc gcccaagccc cgctgccaga cttaaacaat ccacccaatg aggtgctcgc
      421 tgtacccaca ctgccagtca gactgatgtt cgggaaaaac gctgcgcgtg ctgcgccaat
      481 gttggcgttg gcagcaagca attggttttc tgcggcacgg atatctggtc gttgcaccaa
      541 aagctctgat ggcagcccag caggcacgtt tgccaagcgc ttgatatcac caaaggtcgg
      601 tggtggtggc aacgtctgcg gcaccggttg cccaatcaac acgctcaagg cattgcgtgc
      661 gacttgttca tctcgggtat accttgccag gtctgcggca gccgcatcga ccaaggtctt
      721 ggcttggacc gcgtccattt ctgaagccac accattggca aaccgggcct tgaccaactg
      781 ataactgcgc tggcgcgaat ccaaggtctg ctcggttaga ttcatgagta cttgggccag
      841 acgcaagcgg aagtattgaa tggcggtatc agccaccaga ctgatctgca ccgcacgcgc
      901 accttcggct gtggccaagt attgctggaa agccgcctct gacagatttc gcaaacggcc
      961 gaatagatca agctcaaatg ccgtcatcgc aatgcctgcc gagtactggc tactgatgac
     1021 attagtgccg ccgccaggcg aaggcccgcg ctggcgactg cccgcaagcc ccgcacccaa
     1081 ggtggggaac atctcgccac gctgaatacc ccaaatggcc tcggcctcat ccatgcgcgc
     1141 aacagcgact tgcaggtcac gattattttt aagggccacg ccaatgagcg aacgcaacgc
     1201 ctcgtcttgg aaaaatgact gccaaggtag ctcggctgcg ctctcgagac caggagccaa
     1261 cgcttgcgca tcaaccgtct ggctcgtcac gcccccggtg ctctcatcaa acgtcaactc
     1321 aggctgcgcc ggaaaactcg agggcaccgg catgtcgggc tgctcataag tcagcgccag
     1381 gttacaacct gctagggtca aagccatcac gaccagtgcg ctgtatcgca acgcgctcat
     1441 gatgatctcc cggatgtgtc ggactcagtg ggctttgcgg actcaccagc ctcggcatcc
     1501 cgcggccgat gggttggcgc tgcgtgcagc gtcttgacct tggtcttaaa gaacttcagc
     1561 accgtgacaa agaagatcgg cacaaagatc actgagaacg gggtggcagc caacatgcca
     1621 ccaagcaccc cgaagcccac cgcctgctgg ctggcagctc ccgcaccgga agccaaagtc
     1681 agcggcacca cgcccaagat gaaggcaaaa gacgtcatca aaatcggtct gaaacgcagt
     1741 cgagctgcct ccactgccgc ctcgtataac cccatgccct gggcgtgcaa atccttggcg
     1801 aactcgacaa tcaaaatcgc gttcttagcc gacagcccaa tgactgtcac catccccacc
     1861 tggaaataca catcgttatt cataccgagt aacgtcatca tcgtgaccgc ccccaacata
     1921 cccaagggga ccacaagcat cactgacaac ggaatcgccc agctctcata gagcgcagcc
     1981 aacaccagga atacggcaat gattgccaat gccatcagga taggcgcctg cgcaccggcc
     2041 tggatctcct gataggaaag ccccgtccac tcaaaaccaa aacccgctgg caactgagtc
     2101 atgagcgctt gcatggcttg catggcctcg cccgatgagt agcccggtgc tgcactgccg
     2161 gaaatacgta ccgtgtcata actgttgtat cgaacgactt gagaaggacc ttgcttccat
     2221 tgcgcggtca caaatgaaga caaaggcacg agttcgcctt tctggttacg agcctgcaac
     2281 ttcatgatgt ctgcaatgct gttgcgaaac gcttgttcag attgcaccca gacgttttgc
     2341 atacgcccgg tgttaggaaa cttaccgagg aactgtccgc ccatggcggt gcccagtgtt
     2401 gaagccgcat cctggaaagt cacccccatg gcagccaatt tttctcggtc gatcgacaaa
     2461 ctgagctgtg agcctggccc aagccctgaa atacggactt gggagagcac tgggtcttgc
     2521 gcggccagac tcaacatttg cccggcggct tgcatcaacc cgtcataacc cgcaccggac
     2581 cggtcttgca ggcgaaactc aaatccactg gcattaccca gcgaagaaat cgccggcgga
     2641 ataacagcaa acaccatggc gtctggaatg ctgcccatga gcaccccggt ggcttgattg
     2701 gcaacctcaa tggccgactg acccggccct tgacgctcgt caaacggctt taaaggcaca
     2761 aacgccaggg ccgcgtttag accattgcca ttaaagctaa agccgcgcac cgccacaata
     2821 tcttcggtgg tgggttgatc gaggaaataa tcctcgactt gattgatcac ttccatcgtg
     2881 cgcgtggacg acgctcctgt gggcagctcg atattgacga tcagatagcc ctgatcttct
     2941 tcaggtaaaa acgcacctgg tagccgcaca tacagatacc ccatgagcgc cacgagcaac
     3001 aaaaagatca tcatgtagcg cccgggccga tggatcaggt gcgtgaccat gccttcgtaa
     3061 cccttcgtgg tgcgatgaaa accccgatta aaccaaccaa aaaatccacg cttttcttcg
     3121 tgatgacctt taccgatagg cttgagaatc gtggcgcaca aggccggtgt aaacgacaac
     3181 gctaaaaatc cagaaaacag aatcgagacc gccatcgcta ccgcaaactg ctggtaaatc
     3241 acacccaccg acccagccat aaaggccagc ggcaagaaca ccaccgcgag caccaccgta
     3301 atacccacga tggcaccaga gatctgaggc atggctttaa ccgtggcttc acgcggtgac
     3361 aagccctctt cagccataat gcgctcgacg ttttctacga caacgatggc atcatcaacc
     3421 aaaataccaa tggccagtac catggcaaac atcgtcagca cattgaccga aaagccaaac
     3481 gtgttcatca ccgcaaacgc accaagcatg gccactggca ccaccaaggt ggggataatg
     3541 gtgtaacgca cgttttgtag gaagacgaac atgacgataa acaccaggat catcgcctca
     3601 aacagcgtgt gcaccacctg ctcaatcgag gcttcgacat aaggcgcggt gttgtacggt
     3661 atttcgtaag taatgtcgcc cgggaaaaac tcagataact cctgcatgcg agcttgcaca
     3721 ccttctgccg tctctagcgc attggcgccc ggggcgagca ccaccgcaaa ggcggccgtt
     3781 ggattggcat tcagacgcgc accgaactgg tagttgtcag cgccaacttc aacgcgagcc
     3841 acatctttga ggcgcaccga tgagccatcg gggttagcgc gaataacgac attctcaaac
     3901 ccggctacgt cggttaattg cccgtcactg acaatcggcg ttgccacacg ttggctctca
     3961 gggttgggtg ggccacccaa cacaccagca ggaatcagaa cgttctgcgc ccgaatagcg
     4021 ttattaacct cgggcacact taaaccgaga ccaaccaact tgtccggatc aatccacacg
     4081 cgcatggcgc gcggtgcggc aaacaactga aaccgcccga cacccggcac tcgcgagatc
     4141 ggatcttgca cattgcgttt aatgtagtca gccagtcccg tggcatccaa ctcgctttgc
     4201 gatgacagcg tcaccaccat caaaaagcca gcactggttt gctcaaattg caacccctgc
     4261 tgggtgacag cacctggcag ctgggcagtg atgtttgaga cgcgattttg cacatcgacc
     4321 tgtgccaagt ctggatcggt gccaggttca aacgtggcgg taatttgcgc ctgaccgttg
     4381 gagtcgctga ccgactcgta atacagcaaa cctttggcgc cattaagctc gttctcaatg
     4441 atgcttgtga ccgactcgga cacttcagcg gccgacgccc ctggataagt ggcagagatc
     4501 tgaatggcgg gcggcgccac atccgggtac tgtgccaccg gcatggtgcg cagcgccaag
     4561 agtccaatgc cggtgatcag gatggcgact acccacgcaa aaatgggccg atgaatgaaa
     4621 aaatgagaca tgagttaagc agcctgacaa acaaacgagg caaacgcggc aaacgaagca
     4681 aacgaggttt cgagcgaggt ttcaaacaac gcgcaggcag ccatgatcac tttttgttgg
     4741 gctcccaagg gcgggtttgc acgggcgcgc cgggtcgaat tttctgaaac cccgccacaa
     4801 tgacctcatt accgggctct agtcc
//
LOCUS       DATBNL010000700         1611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_88391, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000700 DATBNL010000000
VERSION     DATBNL010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88391"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VIC30_11840"
     CDS             <1..412
                     /locus_tag="VIC30_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HEY7805106.1"
                     /translation="AELKVPIISTIIGEGGSGGALAIATANTVLMLQYSTYSVISPEG
                     CASILWRSADKAPDAAEALAITADRLKGFGLIDRVVNEPVGGAHRDPQVMARLLRRAL
                     ADALRELTGMTSDELVEHRLQRLLAYGQFQEAKG"
     gene            472..1515
                     /gene="tilS"
                     /locus_tag="VIC30_11845"
     CDS             472..1515
                     /gene="tilS"
                     /locus_tag="VIC30_11845"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEY7805107.1"
                     /translation="MLESLPDTQSLAVGLSGGPDSSALAICLDQWCRCHPDNHPNHPN
                     NQPHNPKLYLFHVHHGLSDLADEWQARAQALADLLERPLMVRRIHVELGSGLGVEAAA
                     RQARRQALIEMAHEHHVPVVALGHHQHDQAETVLMRLFRGSGIDGLAAMAAMTHERGV
                     CWVRPWLEVSREAILEFIDRFSQRTGWLPVQDPSNVDSRLARGTLRTEVIPAIESHWP
                     AWRTTLARHAGQAAQVSAVLKRYGQRLLKELACDPQPTDHYADAFGPADSAPVLSLAK
                     WRELQADEQALVIRVWLDQAGMQMPTEKRLNELLRQLRQVHALGHDRALTWKQRDGEI
                     RCVRGQLHLRATL"
BASE COUNT          330 a          444 c          492 g          345 t
ORIGIN      
        1 ggccgagctg aaagtgccaa ttatttccac catcattggt gaaggtggct ccggtggggc
       61 gctcgccatt gccacggcca acacggtact gatgctgcaa tactcgacct actcggtgat
      121 ttcgccagaa ggttgtgcct caattctttg gcgcagcgcc gacaaggctc ccgatgctgc
      181 cgaagcgctg gcgatcacgg ccgatcgtct aaagggcttt gggttgattg atcgcgtggt
      241 caatgagcct gttggcgggg cacatcgtga cccgcaggtc atggcgcgtt tgctgcgtcg
      301 ggcgctagca gatgccttgc gtgaattgac tggcatgacc tcagatgagc tcgttgagca
      361 ccgtctgcag cgactcttgg cttatgggca gtttcaggaa gccaagggct aagtgtggag
      421 cggcatcagg ccggggtgct tgagacaacg ctggcaacca agctggcaaa catgttggaa
      481 tcgctgccag acacgcaatc gctagcggtt ggtctgagcg gcgggccaga ctcaagtgct
      541 ctagcgattt gtctggacca gtggtgtcgc tgtcaccccg acaaccaccc caaccaccca
      601 aacaaccaac ctcacaaccc caaactctat ctttttcacg tgcaccacgg cttgagtgac
      661 ctagcggacg agtggcaggc acgcgcacag gcgcttgccg acttgcttga gcgtccattg
      721 atggtgcgac gcatccatgt ggaactgggc tcaggtcttg gcgtggaggc agccgcgcgc
      781 caggcgcgac ggcaagccct gatcgagatg gcgcatgagc atcatgtgcc ggtcgtggca
      841 cttggccatc atcaacatga ccaagccgag acggtattga tgcgactctt taggggctca
      901 ggcattgacg ggttggctgc catggcagct atgacccatg agcgtggggt gtgttgggtt
      961 agaccctggc tagaggtctc acgagaggcg attctcgagt tcatcgatcg ctttagtcag
     1021 cgcacaggct ggctacccgt tcaagaccca agtaacgtcg atagccgact tgcgcgcggc
     1081 acgttgcgca ccgaggtcat tcctgccatt gagtcgcatt ggcctgcctg gcgcaccacg
     1141 ctggcacgtc atgccgggca agcggcacaa gtcagtgccg tgcttaaacg ttatggccag
     1201 cggttgctca aggagttggc gtgtgaccct caaccaaccg atcactacgc cgatgcgttt
     1261 ggcccagcag attcagcgcc agtgctctcg ctcgcaaagt ggcgtgaact tcaagctgat
     1321 gagcaggctt tggtcattag ggtctggctg gaccaagcgg gcatgcaaat gcccacagaa
     1381 aagcgtctca atgagttgtt acgtcaactt aggcaggtgc atgcgctagg gcatgatcgc
     1441 gcgttgacat ggaagcagcg cgacggcgag atccgctgtg tccgtgggca gttacatctt
     1501 cgggctacac tatagggctt tgaaacttga acgctgtcac tgattaacgg tgcaggcgtt
     1561 cgccacaagg ttcatatggc tctgatcgta cataaatatg gtggtacctc g
//
LOCUS       DATBNL010000701         3293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148217, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000701 DATBNL010000000
VERSION     DATBNL010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148217"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /gene="lptB"
                     /locus_tag="VIC30_11850"
     CDS             <1..696
                     /gene="lptB"
                     /locus_tag="VIC30_11850"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEY7805108.1"
                     /translation="RMVVQDVSLHVDGGEVVGLLGPNGAGKTTSFYMIVGLVQADAGR
                     IEIDGASITAMPIHKRARNGLSYLPQDASVFRRLSVEQNIRAVLELQVDANGRKTTKA
                     EVNRRLEELLDELQIGHLRGNGALSLSGGERRRVEIARALATNPRFVLLDEPFAGVDP
                     IAVIEIQRIVRFLKSRGIGVLITDHNVRETLGICDRAYIISEGSVLTSGDPEDIIDDP
                     AVRRVYLGEHFKM"
     gene            863..1189
                     /gene="raiA"
                     /locus_tag="VIC30_11855"
     CDS             863..1189
                     /gene="raiA"
                     /locus_tag="VIC30_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEY7805109.1"
                     /translation="MNLQITGHHLEVTPAIREYISSKFERVTRHFDHVIDSKVMLTVE
                     PLKHRAEMTLHMRGKDIHCEAAEENLYAAIDLLIDKVDRRVVEHKKKTQDHAHATAKR
                     QIVEES"
     gene            1293..1760
                     /gene="ptsN"
                     /locus_tag="VIC30_11860"
     CDS             1293..1760
                     /gene="ptsN"
                     /locus_tag="VIC30_11860"
                     /inference="COORDINATES: protein motif:HMM:TIGR01419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEY7805110.1"
                     /translation="MKLLSQILPPENVVLDVSVTSKKRALEQVALLFENNQGLERANV
                     FDSLFARERLGSTGLGHGVAVPHGRIKKTKEPSAAFVRLIEPVAFDAPDGQPVDILLV
                     IVVPEEATQQHLDILAEVAQRLSDDSVVSALRTESDALRVHELLTAKSTSAAT"
     gene            1796..2728
                     /gene="hprK"
                     /locus_tag="VIC30_11865"
     CDS             1796..2728
                     /gene="hprK"
                     /locus_tag="VIC30_11865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HEY7805111.1"
                     /translation="MLVVKELVEDNAEDVAFEWLAGQTGDVRPLPDDGRSAADLIGHL
                     NLIHPARIQVFGHEEMAYYRRFDPKRRIRHIEELANGGVPALILAHGLETPSDLVEAC
                     DRTGIPLLRTGVSAAETIDRLRIYLSKRFAPKITVHGVFMDVLGLGVLITGESGLGKS
                     ELALELISRGHGLVADDAVELSRTAPHVIDGHCPVLLQNMLEVRGLGLLNIRTIFGET
                     SVRRKMKLKLIVHLVRASAQEKFERLPLQDTTQEILGEPITKATLQVAAGRNLAVLVE
                     AAVRNTILKLRGIDTLQEFMDKQAQAISEGGKHV"
     gene            2733..>3293
                     /locus_tag="VIC30_11870"
     CDS             2733..>3293
                     /locus_tag="VIC30_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEY7805112.1"
                     /translation="MQSIVLITGMSGSGKSVALQWLEDAGYACVDNLPVPLLRDLIAN
                     ARHGHNRRLAVAIDARSQGDLRELPDMLDALRKIGTAIRVVFLDADDNTLVQRYSESR
                     RRHPLADRMAANNQTVSLKSCIALERELLDRLRNREHVIDTSGLKPVQLRDWMRDLIK
                     ADRPGLLMTLESFAYKQGAPRDADLVF"
BASE COUNT          783 a          877 c          894 g          739 t
ORIGIN      
        1 cgcatggtgg tgcaagacgt cagtctgcat gtcgatggcg gtgaagtggt tggtttgctt
       61 ggaccaaacg gagccggcaa aaccacgagc ttttacatga tcgtggggct ggttcaggca
      121 gatgctgggc gcatcgaaat cgatggtgct tccatcacag ccatgccgat tcacaagcgt
      181 gcccgtaacg gcctgtctta cttgccgcaa gacgcgtcgg tgttcaggcg cttgagcgtt
      241 gaacaaaaca tccgggcggt gctcgaacta caagtcgatg ccaacggacg taaaaccacc
      301 aaggcagagg taaaccgccg ccttgaagaa ctacttgatg agctgcagat tggccatctc
      361 agaggcaacg gtgcgctgtc actatcaggg ggtgagcgcc gacgggtcga aatcgcccgc
      421 gcgctggcaa ccaacccacg atttgtcttg ctcgatgagc catttgccgg cgttgatccg
      481 atcgctgtga tcgaaattca acgcattgtg aggttcttaa aaagccgtgg catcggggta
      541 ctcattaccg atcacaacgt acgtgagacg cttggcattt gtgatcgggc gtacattatc
      601 agcgaaggct ctgtgctcac gagcggcgac ccagaggaca tcattgatga tcctgccgtg
      661 cgccgggttt atttaggtga acatttcaag atgtaagtct gatgctaggg cgcaccggat
      721 gtaagcgaaa tgtaactgag atgtaaccga gatgtaactg ttgtccagtt aggcttgatt
      781 tccttgaaca accctttaca ctgagatgac aggttatctg ccacaccagt accttgggtg
      841 gcttctttca aggagaaaaa gcatgaacct gcagatcaca ggacatcacc tcgaagtcac
      901 gcccgctatt cgggaataca tttccagtaa gttcgagcgc gtcaccaggc actttgatca
      961 tgtgatagac agcaaagtca tgctgacagt tgaacccctt aaacatcgcg ctgagatgac
     1021 gttacacatg cgcggcaaag acatccattg tgaagccgca gaagaaaacc tctatgccgc
     1081 cattgatttg ctgatcgaca aagtcgatcg tcgtgttgtg gagcacaaaa agaaaacgca
     1141 ggaccatgcc catgccacgg ccaaacgaca gatcgtcgaa gaaagttgat ctatctttca
     1201 ccaaaacata gccatttgct cttaaaaaaa ggccaaggaa gggtttctgt gttaagtatt
     1261 gcgctgcggc aaaaacccct ataatttgcg atatgaagct gctgtctcaa atactgcccc
     1321 cagaaaacgt tgtgctcgac gtttcggtca cgagtaagaa acgagcgctc gagcaggttg
     1381 ccctcttgtt tgaaaacaat cagggcctcg agcgtgccaa cgtttttgat agtctttttg
     1441 cgcgcgagcg acttggctca accggcctgg ggcatggcgt agccgtgccc cacgggcgca
     1501 tcaaaaaaac caaagagccc tcggcggctt ttgtgcgttt gatcgaaccg gttgcatttg
     1561 acgcacccga tggacaacca gtcgatatac tgctggtcat agtggtgccg gaagaggcaa
     1621 cgcagcagca tctcgatatc ctggccgagg tcgcccagcg actgtctgat gacagcgtgg
     1681 tgagtgcctt gcgaacggaa tccgatgcct tgcgggtaca tgagctttta actgcaaaaa
     1741 gtacctctgc tgcaacctga tctggcatca agcaaccaac gcttgagggc aagccatgct
     1801 ggtggtcaaa gaactggtcg aggacaatgc tgaggatgtc gcctttgagt ggctggcagg
     1861 gcaaaccggt gatgtacgac cactgcccga tgatggccga tcggccgctg acttgattgg
     1921 ccacctcaac ctcatccacc cagcgcgcat ccaggtgttc ggccatgagg aaatggccta
     1981 ctaccgccgc tttgatccga aacggcgcat ccgacacatc gaagaactgg ccaatggtgg
     2041 cgtgcccgct ctcattttgg cgcacggtct agaaacaccc tctgacctgg ttgaagcctg
     2101 tgatcgcacc ggtattccat tgctacgcac tggcgtgtct gcggccgaaa ccattgaccg
     2161 tcttcgcatc tacttatcaa aacgatttgc cccaaaaatc actgtccacg gtgtattcat
     2221 ggacgtgctt gggcttggtg tactcattac tggcgagtca ggactcggta aaagcgagtt
     2281 ggcacttgaa ctgatttcac gcgggcacgg cttggtcgca gacgacgccg tggaactgtc
     2341 acgcaccgcc ccgcacgtta ttgatgggca ctgtccggtg cttttacaaa acatgctcga
     2401 agtccggggg cttggtttat tgaatattcg caccatcttt ggtgagacgt cggtgcgacg
     2461 caaaatgaag ctcaaactga tcgttcatct ggtgcgcgcc tcggcgcagg agaaattcga
     2521 acgcctgcct ttgcaagaca cgacacaaga aatcttgggt gagccgatca ccaaagccac
     2581 gctgcaagtg gcagccggtc gcaaccttgc ggtgctcgtt gaagccgccg ttcgcaacac
     2641 catcctcaag cttcgcggta tcgacacttt gcaggagttc atggacaagc aagcgcaggc
     2701 tatctccgaa gggggcaagc atgtctgaag gcctgcaaag cattgtgctg atcaccggga
     2761 tgtcgggttc gggcaaatcg gtggcgctgc aatggttaga agatgccggt tacgcctgtg
     2821 tcgacaattt gcccgtgcct ttgctccgag acctgattgc caatgcccgt catgggcaca
     2881 accggcgcct agccgtggcc atcgatgccc gttcacaagg ggacttgcgc gaactgcctg
     2941 acatgcttga tgccttacgc aagattggta cagccatacg cgtggtgttt ctcgatgccg
     3001 atgacaacac actagtgcaa cgttattccg agtcacgtcg ccgtcaccct ttggctgatc
     3061 gcatggcagc aaataaccaa actgtgtcac ttaaatcctg cattgcgctc gaacgtgaat
     3121 tactcgaccg gttacgcaat cgcgaacatg tcatcgatac ctcaggttta aagcccgttc
     3181 agcttcgaga ctggatgcgt gacctgatca aagccgaccg gccaggcctt ttgatgacgc
     3241 ttgagtcatt tgcctacaaa cagggcgcgc cacgcgatgc cgatctggtg ttt
//
LOCUS       DATBNL010000702         1927 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_58220, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000702 DATBNL010000000
VERSION     DATBNL010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58220"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1447
                     /locus_tag="VIC30_11875"
     CDS             <1..1447
                     /locus_tag="VIC30_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015040107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEY7805113.1"
                     /translation="AYVLESHRSVSLEQLAQRWLGLKGLSYQDLCGKGAQQIGFDEVD
                     IEQASQYACEDADYTRRLHDALYPQVQSVQTLEQTYALELDVSTVLWRIERTGVAIDV
                     DVLKKQSHAIGEKLLTLEKQAFELAGQPFNLNSPKQLGEILFGQMQLPVVRKTASGAP
                     STDEEVLSKLAEDYPLPKLLLQYRGLAKLKSTYTDKLPKMVNPNTGRVHTNYAQAAVI
                     TGRLSSSDPNLQNIPIRTPEGRQVRQAFVPTKAGNKLVSADYSQIELRVMAHVSGDEG
                     FCRAFEQGEDIHRATAAEVFNVSIDDVTQDQRRTAKTINFGLIYGMGAHGLATNLGIA
                     RDAAQTYIDRYFARYPGVAQYMAQTKTLAHEQGYVETVFGRRLWLPDINAGGARRAGA
                     ERAAINAPMQGTAADLIKKAMVRVLSWLDSEALQSKVIMQVHDELVLDVPANELELVS
                     RKLPELMCEIATLKVPLLAEVGQGDNWDQAH"
     gene            1565..>1927
                     /locus_tag="VIC30_11880"
     CDS             1565..>1927
                     /locus_tag="VIC30_11880"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY7805114.1"
                     /translation="MTLPAYVAMPERSGRFDVVLVVQEIFGVHEHIQDVCRRFAKEGF
                     MAIAPELYCRQGDPSTLPDIETIVRDIVSKVPDEQVMADLDACLVWAGLHGGDLTRVY
                     ATGFCWGGRITWLYAAHQA"
BASE COUNT          465 a          473 c          548 g          441 t
ORIGIN      
        1 agcctatgtg ctggaatcgc accgaagcgt gtcacttgaa caactcgcgc aacgctggct
       61 tggtcttaaa ggcctgagct accaagatct gtgcggcaag ggtgctcagc aaatcgggtt
      121 tgatgaggtc gatattgagc aggccagtca atacgcttgc gaagatgctg actacaccag
      181 gcgcttgcac gacgcgctat atcctcaggt acaaagcgtt cagacgcttg agcaaactta
      241 tgcgcttgag ctcgacgtct ccacggtgct ctggcgcatt gaacgtactg gcgttgcgat
      301 cgacgtggat gtgctcaaaa agcaaagcca cgctattggc gagaagcttt tgacgttgga
      361 gaaacaagcc tttgagcttg ccggtcagcc gtttaatttg aattcgccga aacagcttgg
      421 tgagatactg tttggacaga tgcaattgcc tgtggtgcgt aaaacggcca gtggtgcacc
      481 gtcaaccgat gaagaagtgc taagtaaact cgctgaagac tatccgttgc ccaagttgct
      541 gctgcagtat cggggattgg ccaaactcaa atcaacctac accgacaaac tacccaaaat
      601 ggttaatcct aatacgggta gggtgcacac caactatgcg caagcggcgg tgattacagg
      661 gcgcttatcc tcgtctgatc caaatttaca aaacatcccg attcgtacac ccgaggggcg
      721 ccaagtcaga caagcatttg tacccaccaa ggcaggcaat aagcttgtct cggccgacta
      781 ctctcagatt gagcttagag tcatggccca tgtctcgggt gatgaagggt tttgtcgggc
      841 atttgagcaa ggcgaggata tccaccgtgc cactgctgct gaggtgttca atgtctcgat
      901 tgacgatgtg acacaagatc aaagacgaac ggctaagact attaactttg gtctcattta
      961 cggcatgggc gcgcatggac tagcgactaa tttggggatt gcacgtgatg ctgcacaaac
     1021 ctatatcgac cgctactttg ctcgatatcc aggcgtggcg caatacatgg cgcagaccaa
     1081 gacactagcg cacgagcagg gctacgttga aaccgtgttc ggcagacgac tgtggctgcc
     1141 cgatattaac gccggtggcg cgcgtcgggc aggtgccgag cgcgctgcta tcaatgcgcc
     1201 gatgcaaggt acagcggctg atcttattaa aaaggccatg gtgcgcgttt taagctggtt
     1261 ggatagcgag gcgctacaaa gcaaagtcat catgcaggtg cacgatgaac tggttttgga
     1321 tgtgccggct aacgaacttg aactcgttag ccgcaaactg cccgaattga tgtgcgaaat
     1381 cgcgacgctt aaggtgccct tgttagccga ggtcggtcag ggtgataatt gggatcaggc
     1441 tcactaaact gacgtttgag gaggcaagac gagtaaatcg accaccacag cacacagcag
     1501 cacacccatc aagactgacg ccgaagggat caagaccgag tggattgata tcgcggctgg
     1561 tgatgtgacg ctgccagcct acgttgcgat gcccgagcgc tctggacgat ttgatgtggt
     1621 cttagttgtg caggaaatct ttggcgtgca tgagcacata caggatgttt gccgtcgttt
     1681 tgctaaagag gggtttatgg ccatcgcccc tgagctctac tgccgccaag gtgatccctc
     1741 aacattgcct gatattgaga cgatcgtgcg tgacattgtc agcaaagtcc ctgacgagca
     1801 agtcatggcg gatctagatg cctgcttagt ctgggctggg ttgcatggcg gtgacttaac
     1861 gcgcgtgtat gccactgggt tttgttgggg tgggcgcatc acctggttgt atgccgctca
     1921 ccaagcc
//
LOCUS       DATBNL010000703         2203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_17822, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000703 DATBNL010000000
VERSION     DATBNL010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17822"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            477..1118
                     /gene="pncA"
                     /locus_tag="VIC30_11885"
     CDS             477..1118
                     /gene="pncA"
                     /locus_tag="VIC30_11885"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020748558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEY7805115.1"
                     /translation="MESIKPTKPTNACALLVVDVQNGFLPGGGLGVDDGHTIIPTINR
                     MAEHFEVVVLTQDWHPQDHISFAANHPGKNPFDVIDLPYGKQTLWPVHCVQGTFDAEL
                     AADLHIPHAQLVIRKGHHKSVDSYSAFLEADKTTPTGLAGYLRERGVSSVYICGLATD
                     FCVAWTALDARAFGFATTVVEDATRAIDVNGSLAQAWDDMHAAGVHRIDSSRF"
     gene            complement(1240..1707)
                     /locus_tag="VIC30_11890"
     CDS             complement(1240..1707)
                     /locus_tag="VIC30_11890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805116.1"
                     /translation="MPNFARVGSLLTSTSVVFLSGCASITGSTDQTISVQAKSAQGTV
                     VEASCELDNDKGKWFVNSPGSTRISRSNEDLIVTCRDDDTTPGVVTVESRTKGSRAGN
                     ILFGGLIGVAIDHSSGAAYEYPTLIEVIMGRVAEITNLVIEDNNQTDSVLATP"
     gene            complement(1764..>2203)
                     /locus_tag="VIC30_11895"
     CDS             complement(1764..>2203)
                     /locus_tag="VIC30_11895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805117.1"
                     /translation="QTFAGTEQIQGVMCEVENDKGKWFVTTPGTISINRSAEDLIVIC
                     RKDGHDTGMANVVSGAGASTAGNVGLALLIPIVGIVGAVVDHNSGAAYDYPTNVRIQM
                     GDSVTVKAPEPSETNTAAQPVRRTTAASGPERFTITPDGVQPQ"
BASE COUNT          493 a          533 c          580 g          597 t
ORIGIN      
        1 gttagtctaa aagcgactat ctgtggtgca cttgcgcgtt cgcacgtatg ttcacacgag
       61 ggcaatgtgt cattcgttgg gtcgctttaa aaactacagg gtcacgaaaa aagtcgcata
      121 agacacgtct cgtggaacaa acctcaccag tcaaagaccc atgggtccac ttgattccgg
      181 cgccgataag cggtttgtat gcaatcggtt taagcaattg gtttgctcct tacctttcgg
      241 tgactagtat cgtccgtgat ctccttgtac cgtcagggat gcttgaatca ctgtgttgtt
      301 acattggggg gaaggttgac cactgcactc tctacgtcat tttgtaaact ctattgtcgg
      361 gcggtaactc ctagacaacg ggtacacgtc ttgacagatt gaacggttgg tatttgtgtc
      421 agtgcgtaac tggccttagc atgacagcct agctttaacc aacgacgaat aaaacgatgg
      481 aaagtattaa gccaactaag ccaactaacg cttgcgcctt gctggtggtc gatgtgcaga
      541 atggatttct gccaggcggt ggtctcggtg tcgacgatgg ccacacgatc atcccgacga
      601 tcaatcgcat ggccgaacat ttcgaggtgg tggtgttaac gcaagactgg cacccacaag
      661 accacatttc gtttgctgct aaccacccgg gaaagaatcc ctttgatgtg atcgatctgc
      721 cgtacggcaa gcaaacactt tggccggtgc actgtgtgca aggcacgttt gacgctgaac
      781 tagctgcgga cttgcatatt ccacatgccc agttggtcat tcgcaagggt catcacaaat
      841 cagtagacag ttactcggcc tttcttgagg cagataaaac cacaccaacg ggcttggctg
      901 gttacttgcg tgagcgtggt gttagttctg tctacatatg tgggttggcc acggactttt
      961 gtgtggcatg gactgcactt gacgccagag cgtttgggtt tgcgactacg gtggttgaag
     1021 acgccacgcg ggccatcgac gtcaatgggt ctctcgccca agcctgggat gacatgcatg
     1081 ccgctggtgt gcatcggatt gatagttcgc ggttttaatt gcccgtcaat agcggggtta
     1141 gtcggtgttg atcttggggg agaatagctc caacattgat ttctttagtt acaacaaatt
     1201 ctttgttggg ctgtacttta agaatgtgta ctaagcgcat caaggcgtcg ccaacacact
     1261 atcggtctgg ttgttgtctt cgatgacaag gttggtaatt tctgcaaccc gtcccatgat
     1321 cacttcgatt aatgtcgggt attcataagc ggcaccactg ctgtgatcaa tggctacacc
     1381 aatcaaaccg ccaaacagaa tattgcccgc cctgctgccc ttggtgcgcg attcaacggt
     1441 gacgacgcct ggtgtggtgt catcatcgcg gcaggtgaca attaaatcct cattggaacg
     1501 tgaaatacgg gttgagccag gcgagttaac aaaccatttg cccttgtcgt tgtcgagctc
     1561 acaactagcc tcaacaactg taccttgggc tgatttggcc tgaacggata tggtctggtc
     1621 agtggacccg gtgatggatg cgcagcccga gagaaatacc actgatgtac tggttaatag
     1681 gctaccgact cttgcaaagt taggcatgtt ctcgtttcct tactattcga tggtttcgtt
     1741 cgtttggttt tttgttcaac cacttattgg ggctgcacgc catctggggt gatggtgaag
     1801 cgttcaggcc cagaggcagc cgttgttcgt ctgactggtt gtgcggcggt gtttgtctca
     1861 ctcggttctg gtgctttgac agtgacggag tcgcccatct gtatacgcac attggtgggg
     1921 tagtcatagg ctgcgcctga attgtgatcg actacagcac cgacaatgcc cacaatcggg
     1981 atgagcaatg ccaaaccgac attgcccgct gtgctggctc cggcacctga aactacattt
     2041 gccatgcccg tatcgtgacc atctttgcgg caaataacga tcaggtcttc tgcggagcga
     2101 ttaatcgaaa tagtgcctgg cgtcgtgaca aaccactttc ccttgtcgtt ttctacttca
     2161 cacatcacac cttgaatttg ttcggtgcct gcaaaggttt gaa
//
LOCUS       DATBNL010000704         1758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_58234, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000704 DATBNL010000000
VERSION     DATBNL010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58234"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            360..1193
                     /gene="hpnC"
                     /locus_tag="VIC30_11900"
     CDS             360..1193
                     /gene="hpnC"
                     /locus_tag="VIC30_11900"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEY7805118.1"
                     /translation="MSVNHYENFPVASLVLPARLRADVVNLYRFARTADDIADEGEMT
                     AQQRREQLAQFRDALLTVVNDPTLDTTGIATLDPIFMPLSDSIKRHQLPVDQLNNLLC
                     AFEQDTIKSRYANETELMDYCQRSANPVGRLMLQLFEQTDAQSLIESDAICTALQRIN
                     FLQDVAIDLKKDRIYLPEDALQNHGITEVDLRDGLVNAQWQALMAKQIAICRELMYTG
                     KPLGRRLRGRIALEIRLIIAGGLRILEKIEAVQGDVFRHRPTLTKRDWIGLLWQAIRA
                     T"
     gene            1190..>1758
                     /locus_tag="VIC30_11905"
     CDS             1190..>1758
                     /locus_tag="VIC30_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HEY7805119.1"
                     /translation="MTPDEYCQEKAAKSGSSFYYAFLFLPDARRKAITALYAFCREVD
                     DVVDECTDEGIARTKLAWWHTQVSQMFEGNPTHPVTRALETHLTPFGMTEARLQAIIT
                     GMEMDLDKSRYANWQELENYCWHAAGVVGELSAGIFGYQMPETLTYATKLGLAFQLTN
                     IIRDVGDDARRGRIYLPADELDQFKVNSN"
BASE COUNT          450 a          459 c          436 g          413 t
ORIGIN      
        1 tgaccgctga aagcgtcacg tacaaagcgc ttttctagcg cgccgcaggt ggaactggtg
       61 tcctcattga tttgaggata aaagtacagg ccgcctagaa tgacagcaag aataatgatg
      121 attttcatga tgttttgaac actttgtatt ggacgcgcac gtggatttac acgcgtggac
      181 ctgcacgcac tagatcgcta aaggttgtca ttttcctaca gaatgccctc taagcaaaat
      241 gcacatcccg tcaggcacgg ctgcccccag accggttgat catccgggct gcagtagttc
      301 cggcaaaatg ggtcagtaca atgaggcact tctagtcgcc agtctgagtc agatcgccca
      361 tgtcggttaa tcattacgag aattttcctg tcgcctcgct ggtgttgcca gcgcgcttgc
      421 gcgctgatgt cgtcaatctc tatcgctttg cgcgaaccgc agacgacatt gctgacgaag
      481 gtgagatgac cgcgcaacag cgacgtgagc aattggccca atttcgtgat gcccttctga
      541 ccgtggtcaa tgacccgacg cttgatacca ccggcattgc gacgcttgac cccatcttta
      601 tgccgctgtc ggattccatc aagcgccatc agttaccagt cgaccaactc aataacctgc
      661 tgtgcgcatt tgaacaagac accatcaaat cacgctatgc caatgagaca gagctcatgg
      721 actactgcca acgctcggcc aatcctgtcg gacgtttgat gttgcaattg tttgaacaaa
      781 ccgacgcaca aagcttgatc gaatcagacg ccatttgcac ggctttacaa cgcattaatt
      841 ttttgcagga cgtggccatc gacttaaaga aagatcgaat ctacttgccc gaagatgcac
      901 tacaaaacca cggcatcact gaagttgact taagagatgg ccttgtcaat gcgcaatggc
      961 aggcactcat ggctaagcaa atcgcaatat gccgtgagct gatgtacaca ggcaagcctc
     1021 tggggcgacg cctacgtggc agaatagccc ttgaaatacg attaatcatc gctggtggtt
     1081 tacgaattct tgagaaaata gaagctgttc aaggcgatgt atttcgccac cggccaaccc
     1141 tgaccaaacg agactggatc ggcttgcttt ggcaagcgat tcgagcgaca tgacaccaga
     1201 cgaatactgc caagaaaaag cagctaagag cggctcaagt ttctactacg cctttctgtt
     1261 tttacccgat gcgcggcgca aagccattac agcgctttac gctttctgtc gtgaagtcga
     1321 cgatgtggtt gatgagtgca ccgatgaagg tatcgcaagg accaagcttg cctggtggca
     1381 cactcaagtt agccagatgt ttgaaggcaa cccgactcat cccgtgacac gcgccttaga
     1441 gacgcacctg acaccgttcg gtatgactga ggcgcgtctg caagcgatca ttaccggcat
     1501 ggaaatggat ttggacaaat cccgctatgc caattggcaa gagctcgaga actattgctg
     1561 gcatgccgcg ggtgttgtcg gtgagttgtc tgcaggtatt tttggttatc aaatgcccga
     1621 gaccctgacc tatgccacca aactcggtct ggcattccaa ctgaccaaca tcattcgcga
     1681 cgtcggtgac gacgctaggc gaggccgaat ttacttgcct gccgatgaat tagatcaatt
     1741 taaagtcaat agcaacga
//
LOCUS       DATBNL010000705         2421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_138030, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000705 DATBNL010000000
VERSION     DATBNL010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138030"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VIC30_11910"
     CDS             complement(<1..564)
                     /locus_tag="VIC30_11910"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HEY7805120.1"
                     /translation="MTADKNSGKNSATNTATAETSQMAKPGKPGCFFLVVGPSGAGKD
                     SLMDGARQQLPPDQFVFAKRIITRPPGMIGEDYQSCDPATFAQKAKEGDFLMTWQAHG
                     YQYGLDRSLLEQQHRGKHIIANGSRAAVSEMANQVRQLIPNFVVVLVTAPIDVLADRL
                     AKRGRESRSDIKQRLERHVHPLPEEIEV"
     gene            complement(561..1196)
                     /locus_tag="VIC30_11915"
     CDS             complement(561..1196)
                     /locus_tag="VIC30_11915"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEY7805121.1"
                     /translation="MWTNKANKLILASASPRRLELLKQIAVPVEQLVVPVVQTVSISG
                     DDEPRLPGETVTDYVMRTAHDKNQRARAHWHDTYADHDIPILSADTTVAMDQTILGKP
                     VDDADAKRILTALAGQTHDVYTAVVLSTSAIDGQTHSALVHTRVTIDVALHDCIDAYI
                     ATGEPKGKAGAYAIQGIAAAYVTEVTGSYSSVVGLPLYETAQLLRQAGLYS"
     gene            complement(1264..1737)
                     /gene="rlmH"
                     /locus_tag="VIC30_11920"
     CDS             complement(1264..1737)
                     /gene="rlmH"
                     /locus_tag="VIC30_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEY7805122.1"
                     /translation="MRLTIAAVSQRPPAWVEDGFETYAKRLPPDWQVDLKVVKPADRQ
                     SGKTAQQNMAIEAQRLETALKNVPGTRVALDEHGTTVTTESFLQVIQTQQDQQGGVVF
                     VIGGPDGLDADFKRQCPVSLKLSAMTLPHALVKVLLIQQIYRAYSLASGHPYHRP"
     gene            complement(1741..2262)
                     /gene="rsfS"
                     /locus_tag="VIC30_11925"
     CDS             complement(1741..2262)
                     /gene="rsfS"
                     /locus_tag="VIC30_11925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010114519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEY7805123.1"
                     /translation="MDIKKQQRAVVDALEDVKAQDIHVYNTEALTGLFDRVVIATATS
                     NRQTRALAHSVEDKARELGLMVIATEGLETGEWVLVDLGDIVVHIMQQAIRQYYNLEE
                     IWGGKPVRMKLGSQPASPTAIVVPAPAKPKTARKTPTKTPTKTPTKRASKTAGARAPR
                     TAAPKSTGTNTQD"
BASE COUNT          461 a          581 c          735 g          644 t
ORIGIN      
        1 aacttctatt tcttcgggca gtggatgcac atggcgttcg agccgttgtt tgatgtctga
       61 gcgagactcg cgaccgcgct tagcaagtcg atcggccagc acatcaatgg gcgctgttac
      121 aagcacgacg acgaagttgg gtatcagctg acgcacctgg ttggccattt cactgaccgc
      181 ggcgcgtgaa ccgttggcaa tgatgtgttt ccctctgtgc tgttgttcaa gcaagcttcg
      241 gtctagccca tactgatagc cgtgggcttg ccacgtcatc agaaaatcac cttctttggc
      301 tttttgtgcg aaggttgctg ggtcacagct ttgatagtct tcaccgatca tgccaggtgg
      361 ccgagtgatg atccgtttgg caaagacaaa ctgatctggc ggcagttgtt ggcgtgcacc
      421 atccatcagg ctatctttgc ctgcgccact aggtcccacc accagaaaaa aacagccggg
      481 tttgccgggc ttagccattt gacttgtctc ggcggtggcg gtgtttgttg ctgagttttt
      541 gcccgagttt ttgtccgcgg tcatgaatac aacccagctt ggcgcagcaa ttgtgcggtt
      601 tcatacagtg gtaatccgac cactgaactg taactgcctg tgacctctgt cacataagcc
      661 gcagcaatgc cctgaatggc ataagcgccg gctttgcctt tgggttcgcc cgtggcgatg
      721 taggcgtcga tgcagtcatg aagtgcgaca tcgatggtta cacgcgtgtg gaccagcgca
      781 ctgtgcgttt gtccatctat tgcgctggtg cttagcacca ccgcggtata gacatcatgg
      841 gtttgtccgg caagggcagt aagaatacgt ttggcatcag cgtcgtccac tggcttgccc
      901 aggatggttt gatccatggc gacagtcgtg tcggccgaca ggatggggat atcgtgatct
      961 gcgtaggtgt catgccaatg ggcgcgcgca cgctggtttt tgtcgtgagc agtgcgcatg
     1021 acgtagtcag tgacagtttc acccggcaag cgcggctcgt cgtcgccgct gattgacact
     1081 gtttgcacca cgggcaccac gagttgttca acaggcacgg caatttgctt gagcagctcg
     1141 aggcgtctgg ggcttgctga ggcaaggatc agtttgtttg ctttgttggt ccacatcgca
     1201 gtgcaactct ccgtgtttga tccaagattg gtgtgtgttt gatcggtgtc gggtgtcggg
     1261 gtatcagggg cggtggtagg ggtgaccgct tgccagtgaa taggctcggt agatttgttg
     1321 aatgagcagc actttgacga gagcgtgggg tagggtcatg gcagataact ttaatgagac
     1381 tgggcactga cgcttaaagt cagcatcaag tccgtctggg ccgccgatta caaacaccac
     1441 accgccttgt tgatcctgtt gggtttgaat cacctgcaag aaggattcgg tggtgacggt
     1501 tgtaccgtgc tcatcgagtg ccacgcgtgt accaggcacg ttttttaagg cggtctctaa
     1561 gcgttgtgcc tcgatggcca tgttctgttg ggcggtttta ccggattgtc gatcggcggg
     1621 tttgacaact ttgagatcca cctgccaatc aggcggtagg cgcttggcgt atgtttcaaa
     1681 gccatcttct acccaagcgg gtgggcgttg gctgactgcg gcaattgtca gcctcatggc
     1741 ctagtcctgc gtgttggtgc ccgttgactt gggtgcagct gttcgtggtg ctcgtgcacc
     1801 ggcggtttta ctggcgcgct tggttggggt tttagtgggg gttttagtgg gggttttgcg
     1861 tgctgtttta ggtttggcag gggcaggcac cacaatagct gtcgggctag cgggttgtga
     1921 gccgagtttc atgcgaacag gtttaccgcc ccaaatctct tcaaggttgt agtactggcg
     1981 aatggcttgc tgcatgatgt gaaccacaat gtcacccaag tccacgagca cccactcacc
     2041 ggtctctaag ccttcagtgg caatcaccat tagaccaagc tcacgggctt tgtcttcgac
     2101 tgaatgtgcc agtgcgcggg tctgacggtt tgaagtcgcc gtggcaatca cgacccgatc
     2161 aaataagcca gtcagggctt ctgtgttgta gacatgaatg tcttgggctt tgacgtcttc
     2221 aagggcgtca acgacagcgc gttgttgttt tttaatatcc atggggagaa tgttactcga
     2281 agccagccgc taatgcgcaa gcagggcggt caatgagaag agttatttgc tggattattg
     2341 ttccggacgt tgttgcgacg agttggaagc gccgcaaaca ccataaagac cgtgttggtc
     2401 gatgtaggtg atcactttgg g
//
LOCUS       DATBNL010000706         1892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_197206, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000706 DATBNL010000000
VERSION     DATBNL010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197206"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1231
                     /locus_tag="VIC30_11930"
     CDS             <1..1231
                     /locus_tag="VIC30_11930"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEY7805124.1"
                     /translation="VTQKLTALELAITQFENDEAAQADPDLLPIIKQLQQRLTTGNDC
                     VQNMIKETRSFAAGNQASEQALPPLPAGLLSRQSYSPRLLWQNLRLDSPPFRFALRVS
                     TAVLIGLLIGVAVPELGEHAYWIVLTIIIIMKPAFAQTKQRNYQRLSGTLIGCLIAFV
                     LCSLTTNHMLLGMVIGVSLLLIPAFMFINYQIAVILITLLVLLSLQLLLPHSINLIAE
                     RGLDTVIGSIIALACSRILPWWEAKSLPDLARTLAERTADLLTAALDQMRADTGNAPT
                     PTWSLAKRDALVAYSNFANALYRMMREPKAQQIQAQAYNDLLVSCHVLATEISTIVFL
                     SQRSKYPMPQETVDILQAMSAALRTQAFNETARWHKDPWWSEAPSVYEHPLRQLHLAF
                     ERTLNDLSELNVRSRNH"
     gene            complement(1254..>1892)
                     /locus_tag="VIC30_11935"
     CDS             complement(1254..>1892)
                     /locus_tag="VIC30_11935"
                     /inference="COORDINATES: protein motif:HMM:NF023950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3734 domain-containing protein"
                     /protein_id="HEY7805125.1"
                     /translation="RTRTVTNAIHLMQRMRKALIDTVDRIPESVRAKDPWFDHMVQRM
                     MGSRYNVIHLIYRNKQTEGHYKDYQFSAETKNMHWQTGLHDMDETLNYPQCLDLPHEG
                     ENFVSFDVHTRQRTTSAQFQVEDLVHPKHIQHHGEPKETSDAQATSSETHATAKPPVT
                     QGLGTPSKTPVKKAAVKKAAVKKAAVKKAPTKTPAAKKVPAKKASAKKAASK"
BASE COUNT          419 a          512 c          456 g          505 t
ORIGIN      
        1 cgtcacacaa aaactcaccg cactcgaact tgccatcacc caatttgaaa atgacgaagc
       61 tgcacaagca gacccagatc tactacccat catcaagcaa cttcaacagc gcctgaccac
      121 aggaaatgat tgtgtacaaa acatgatcaa agaaacgcga tcttttgctg cgggcaatca
      181 ggcttcagaa caagcactgc caccgctgcc cgctgggttg ctgtcacgac agtcatacag
      241 ccctcgcctg ctctggcaaa acctgcggct cgactcacca ccgtttcgct tcgcgctgcg
      301 ggtcagcacc gcggtgttga ttggcttgct cattggtgta gctgtacccg agctcggcga
      361 gcatgcctat tggatcgtgc tcacgatcat catcatcatg aagcccgcgt ttgcacagac
      421 caaacaacgc aattatcagc gcttgtctgg cacgttgata ggttgtttga ttgcgtttgt
      481 gctgtgttcg ctaactacca accacatgct gctaggcatg gtcatcggcg tcagtttgtt
      541 gctgattccc gcattcatgt tcattaatta tcagatcgcc gtgatcttga tcacactact
      601 cgtgcttttg tcattgcagc tcttgttgcc tcattccatc aacctaatcg cagaacgcgg
      661 cttggacaca gtcattggct ccatcatcgc tttggcatgc agtcgtatcc tgccctggtg
      721 ggaggcaaaa tcattacctg atcttgcacg aacactcgct gaacgaaccg ctgatttatt
      781 gacggcggcg ctcgatcaaa tgcgcgcaga cacaggcaac gcaccaacac caacctggtc
      841 gctagcaaaa cgtgatgcgt tggtcgcata cagcaacttt gccaatgccc tataccgcat
      901 gatgcgagaa cccaaggcac aacaaataca agcccaagcc tacaatgact tactggtgag
      961 ctgtcacgtg ctggcaactg aaatttcgac tatcgtgttt ttgagtcagc gtagcaagta
     1021 cccaatgcca caagaaacgg tcgatatatt gcaagccatg tcggctgcgc tgcgcaccca
     1081 ggcgttcaat gaaacagctc gatggcacaa agatccatgg tggtctgagg caccgtcggt
     1141 gtatgaacac cctctaagac agcttcacct cgcatttgag cgaacactca acgacttgag
     1201 tgagttgaat gttcgctccc gtaaccactg acgcttcacc gactatttgc cgactattta
     1261 gaagccgctt tcttggctga cgctttctta gctggcactt tttttgccgc gggggttttg
     1321 gtcggcgctt ttttgacagc tgccttctta actgctgcct tcttaactgc tgctttcttt
     1381 actggcgtct tgcttggtgt tcccagccct tgcgtcaccg gcggcttagc cgtagcgtgc
     1441 gtttcggaag atgtcgcttg cgcgtcactc gtttctttgg gctctccatg atgttggata
     1501 tgcttcggat gtaccaaatc ttcaacttga aactgtgctg atgttgtacg ttgtcgggta
     1561 tgtacgtcaa atgacacgaa gttttcacct tcgtgcggta gatcaagaca ctgcgggtag
     1621 ttcagtgtct cgtccatgtc gtgcagacct gtctgccagt gcatgttttt ggtttcagcg
     1681 ctgaattgat agtctttgta gtggccttcg gtttgtttat tgcgatagat aagatggatc
     1741 acgttgtagc gtgaacccat catgcgttga accatgtgat caaaccaagg gtctttggca
     1801 cgcacgctct cggggatgcg atccactgta tcgatcaggg ccttgcgcat gcgctgcatg
     1861 agatgaatgg cgttcgtaac cgtacgcgtt cg
//
LOCUS       DATBNL010000707         2147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148314, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000707 DATBNL010000000
VERSION     DATBNL010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148314"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VIC30_11940"
     CDS             <1..200
                     /locus_tag="VIC30_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805126.1"
                     /translation="LKEHTEMANEIENRVREHFGVKPREGTVPAAGKSAGKAADKGTD
                     KATDKATETVTAADQTDAPEQ"
     gene            184..672
                     /gene="recX"
                     /locus_tag="VIC30_11945"
     CDS             184..672
                     /gene="recX"
                     /locus_tag="VIC30_11945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEY7805127.1"
                     /translation="MRQSNKSETFVPLTAAQLKTRAVRWLAAREHTRGELARKLKPYT
                     DNPEDIETVLDDLEREGWQSDARYVQSFQRVKAVRQGNALIAQGLRQKGVDAELIAQT
                     LEQLKDTEFDRARAVWDKKFGHVGISREPKEKARQARFLASRGFASDVIRRVIGGEVG
                     ED"
     gene            complement(785..1924)
                     /locus_tag="VIC30_11950"
     CDS             complement(785..1924)
                     /locus_tag="VIC30_11950"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7805128.1"
                     /translation="MMGRPIYFPSEARGLLENLMRSRKSTDNLPSKTVTPAEIETRLL
                     AICDARGEQALGKLRDEAKLVSQTLGLDRELKKLDDLVGAILGTRKAELTTAAGKGLT
                     AAIPFDAQRLSRLEELAATLRATPLRESTCPITSQAGRVNFAFLESYFSNFIEGTEFE
                     IQEARAFVLQGKPITERPKDSHDILGVFRQIMDPGWANQIMSSGEPVLEQLRARHADQ
                     MRQRPEVMPGQFKTQTNRAGNTLFVAPRLVRGTLIEASKILPTVPAGLARALFAMFMV
                     SEIHPFTDGNGRLARLVMNAELSVVNRCRIIVPTLYREEYLDCLRVLTREGDPKPFLD
                     AMQWIQVWTAAFDYEDLDRTIDTMAACNAFERSRVQHRLLAPKDL"
BASE COUNT          486 a          557 c          615 g          489 t
ORIGIN      
        1 tcctgaaaga gcataccgag atggccaacg agatcgagaa ccgggtgcgc gagcatttcg
       61 gggtcaagcc tcgcgagggt acggtgccag cggctggcaa gtctgcgggt aaggcagctg
      121 ataaagggac tgataaggcc actgacaaag caaccgagac ggtaaccgcc gctgatcaaa
      181 cggatgcgcc agagcaataa gtccgagacg tttgtgccgc tgaccgcggc gcaactgaaa
      241 acgcgtgcag tgcgttggct tgctgcacgc gaacacaccc ggggtgagct tgcccgcaag
      301 ctcaaaccct acactgacaa cccagaagac attgaaaccg tgctcgatga cctcgagcgc
      361 gaaggctggc aatccgatgc ccgctatgtg cagtcgtttc aacgtgtcaa agccgtgcgc
      421 caaggcaatg ctttgatcgc gcaaggtcta cgccaaaagg gtgtggatgc tgaactcatt
      481 gcgcaaacac tcgagcaact caaagacacc gaattcgacc gtgcccgcgc ggtttgggat
      541 aagaagttcg gtcatgttgg catttcccgt gaacccaaag aaaaagcccg gcaggcaagg
      601 tttctggcta gccgtgggtt tgcctctgat gtgattcgtc gcgtgattgg gggcgaagtg
      661 ggggaagact gagaacgagt aactgcttgg tctaactgat cgaaccaact aattggcgcg
      721 agcactgatt tatgttgagc gtgctgcgaa gaaagactcg gcaggagagg gtacaaatac
      781 cctgttaaag gtctttcggt gcgagcagtc tgtgttgtac acgagaacgc tcaaaggcat
      841 tgcaggcagc catggtgtca atggtgcgat cgaggtcctc gtagtcaaaa gccgccgtcc
      901 aaacctgtat ccattgcatg gcatccagaa acggcttggg gtcaccttcg cgggttaata
      961 cacgcagaca gtccagatat tcttctcggt atagcgtggg cacgatgatg cggcagcggt
     1021 tcacaaccga cagctcggcg ttcatcacta gtctggccag acggccattg ccatcggtaa
     1081 acgggtggat ttctgagacc atgaacatgg caaacagcgc tctggccaag cctgccggca
     1141 ccgttggcag tatctttgag gcttcgatca gcgttcctct gaccaaacgc ggtgctacaa
     1201 acagcgtatt gcccgcccgg ttggtttgag ttttgaattg ccccggcatg acctctgggc
     1261 gctgcctcat ttgatcggca tggcgcgcgc gtaactgttc aagcactggt tcgcctgagc
     1321 tcatgatttg attggcccag ccgggatcca tgatttgccg aaaaaccccg agaatgtcat
     1381 gcgagtcttt gggacgctcg gtgatgggtt tgccttgcag cacaaacgca cgtgcctctt
     1441 gtatctcgaa ctcggtgcct tcgatgaagt tgctaaagta cgactctaag aacgcaaagt
     1501 tcacgcggcc agcttggctt gtaatcgggc aagtcgattc acgcaatggt gtggcgcgta
     1561 aggtggcggc gagctcctct agtcttgata aacgctgggc atcaaaaggt attgcggcgg
     1621 tcaatccttt acccgccgcc gttgttagct ctgcctttct agtacctaga atcgcgccaa
     1681 cgaggtcatc aagtttcttt agctcgcgat caagtccaag tgtttgtgag acaagcttgg
     1741 cttcatccct gagcttgccc agtgcttgtt cgccacgagc atcgcagatc gcaagcagcc
     1801 tggtctcaat ctcagccggt gtgacggttt tagagggaag gttgtcggtg cttttgcgtg
     1861 aacgcatcaa gttctctagc aagccccgag cttctgatgg aaagtagatg ggtcgcccca
     1921 tcatgggcgt gtcaccgtag atagggccat ggcctttacc gttcagcgcg taaagccccg
     1981 ttattcaggg cggggatgta agcgcgggcg tagccagtgc agtgtgtcag ttttttggtt
     2041 tttatgtcat cctgatctac cgtacattac tgtctttgat acaatcattg tcattatgac
     2101 agttactcgc aaggccttta aattccggct caaccccacg gcagagc
//
LOCUS       DATBNL010000708         2466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_37756, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000708 DATBNL010000000
VERSION     DATBNL010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37756"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /gene="argH"
                     /locus_tag="VIC30_11955"
     CDS             <1..1094
                     /gene="argH"
                     /locus_tag="VIC30_11955"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015039822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY7805129.1"
                     /translation="DAGKRLHTGRSRNDQVATDIRLWLREQIDLINVQLQALRLGLAE
                     LAIEHAQTIMPGFTHLQVAQPVTFGHHLMAYAEMFGRDAERLADCRKRVNRLPLGAAA
                     LAGTSYPIDRARVAKTLGFDGVCGNSLDAVSDRDFAIEFCAFSAVLMMHVSRLSEELV
                     LWMSPRVGFIALADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLIALLTLMKAQPL
                     AYNKDNQEDKEGLFDAADTVRDTLTIFADMMHGITVHQDNMRDAARQGFATATDLADY
                     LVKKGLPFRDAHEVVAHAVLTCEQRGCDLADLSLTELQAFDARIEDDIHAVLTLEGSV
                     NARDHIGGTAPAQVKAAATALRDELRDAR"
     gene            complement(1130..2446)
                     /gene="rlmD"
                     /locus_tag="VIC30_11960"
     CDS             complement(1130..2446)
                     /gene="rlmD"
                     /locus_tag="VIC30_11960"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEY7805130.1"
                     /translation="MAQPFEVQIESLDQEARGVGHMDGKVVFVEGALSGELVTAQLIK
                     KKPKFNTARAIEIHRHSWMRVEPGCQYFGVCGGCAMQHLDAQAQVAVKQRVLEDAFKH
                     LAELKPEQMLAPIHGPSWGYRYRARLSVKFVPRKGGVLVGFHERRSSFVADMHSCEVL
                     PRKVSDMLVPLRALIESMSEPERLPQIEVAVGQEVVAMVLRHLDALTPEDRDRLRAFA
                     QEHGVQWWLQSKGPDTVHLLEGQAPLTLAYDLPAFNVYMPFKPTDFTQVNHEINRVLV
                     SRALSLLDVQPTDRVLDLFCGLGNFTLPLARLAHEVMGIEGSDQLVERAQQNATANGI
                     SNASFTERNLFEFSLDDLSALPRFDRMLIDPPREGALAVCEALAAQEANARPARIVYV
                     SCNPATLARDAGVLCGGGAYRLRQAGVVNMFPHTGHVESIAVFEPC"
BASE COUNT          575 a          716 c          653 g          522 t
ORIGIN      
        1 gcgatgctgg caaacgacta cacacaggtc gttcgcgcaa cgaccaagtc gccaccgata
       61 ttcgcctatg gttgcgtgaa cagattgact tgattaacgt gcagttacag gcacttcgtc
      121 tgggactcgc tgagctcgcc atcgagcacg cgcaaaccat catgcctggc tttacccacc
      181 tacaggtggc tcagcccgta acctttggtc accacctcat ggcttacgcc gagatgttcg
      241 gacgagacgc agagcgcttg gccgactgcc gcaagcgggt taaccgactg ccattgggcg
      301 ctgccgcact ggcaggcacg agctatccca ttgatcgcgc gcgtgttgca aaaaccttgg
      361 ggtttgacgg tgtgtgcggc aactcccttg acgcggtctc cgatcgtgac tttgccatcg
      421 agttctgcgc ctttagcgct gtactaatga tgcatgtgtc tcgcttgtcc gaagagctgg
      481 tgttatggat gagtccacgt gtgggtttca ttgccctggc tgaccgtttc tgcacaggca
      541 gctccatcat gccgcaaaag aaaaaccccg atgtccctga attggcgcga ggtaaaaccg
      601 ggcgcgtcaa tggccaccta atcgcgttgc ttaccctgat gaaggcgcaa ccgctggcct
      661 acaacaagga caatcaggaa gacaaagaag gtttgtttga tgccgctgac actgtgcgcg
      721 atacgctgac catctttgca gacatgatgc atggcatcac agttcaccaa gacaacatgc
      781 gcgatgccgc acgtcaaggg tttgccacgg caactgactt ggcagactac ttggtcaaga
      841 agggtttgcc gtttcgcgac gcccatgagg tcgtggcgca tgcggtatta acttgcgagc
      901 aacgcggctg cgacttggcg gatttaagcc tcactgaact gcaggccttc gacgcacgca
      961 ttgaagacga catccatgca gtgctgactt tggaaggatc tgtcaatgcg cgtgatcaca
     1021 ttggtggcac ggcaccggct caggtcaagg ctgcggccac ggctttgcgt gatgaactgc
     1081 gcgatgccag atgattaacc acatgaagaa ccgcgcaatc agccttggtt cagcaaggtt
     1141 caaacaccgc aattgactcg acatgcccgg tgtgggggaa catgttcacc acaccggcct
     1201 gtcgtagacg ataagcgcca ccgccacaca aaacaccggc gtcgcgtgcc agcgtggccg
     1261 gattgcacga cacgtaaacg atgcgcgcag gtcgggcatt cgcttcttgc gcagccaatg
     1321 cctcacagac ggcaagcgca ccttcacgcg gcgggtcaat cagcatgcgg tcgaatcgtg
     1381 gcaaggccga caaatcgtct aagctgaact cgaacaaatt gcgttcggta aatgatgcat
     1441 tcgagatgcc attggccgtt gcgttttgtt gggcacgttc gaccaattgg tcactgcctt
     1501 cgatgcccat gacctcatgc gccaatcgcg cgagcggcaa tgtgaagtta cccaagccac
     1561 agaacaaatc aagcacgcga tccgtcggtt ggacatcaag caaagacagc gcacgtgaca
     1621 ctaaaacccg attgatctca tgattaacct gcgtgaaatc cgtgggctta aacggcatgt
     1681 acacattaaa tgcgggcaaa tcataagcta aggtcagtgg cgcttgtccc tcgagcaaat
     1741 gaactgtgtc aggtcctttg gactgcaacc accattgcac gccatgttcc tgcgcaaatg
     1801 cacgcaggcg atcacgatcc tcgggcgtaa gcgcatcgag gtgcctaagc accatggcga
     1861 caacctcttg acccaccgcc acttcgattt gtggcaggcg ttcaggttca ctcatggact
     1921 cgatcagtgc ccgcaacggc acgagcatgt cactgacctt gcgcggcaag acttcgcaac
     1981 tatgcatgtc cgccacaaaa ctgctgcgtc gctcatgaaa cccgactaat acgccaccct
     2041 tgcgtggcac aaactttacg cttaatcgag ctcgataacg atagccccaa ctcgggccat
     2101 gaatgggggc cagcatctgc tcaggtttga gttcagccaa gtgcttgaaa gcatcttcaa
     2161 gcacgcgttg cttaactgcg acttgggctt gggcatccaa gtgctgcatg gcacagcccc
     2221 cacacacccc aaaatactga cagccaggct caactcgcat ccagctgtgt cgatggatct
     2281 cgatggcacg ggcggtatta aatttaggtt tctttttgat gagctgtgcg gtgaccaact
     2341 caccggacaa ggcgccttca acaaacacca ccttgccatc catgtgccct acaccacgcg
     2401 cttcctgatc gagtgactcg atttgcactt caaacggttg ggccatgatt acgcgcgatc
     2461 ccagga
//
LOCUS       DATBNL010000709         1990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148339, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000709 DATBNL010000000
VERSION     DATBNL010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148339"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..770
                     /locus_tag="VIC30_11965"
     CDS             201..770
                     /locus_tag="VIC30_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HEY7805131.1"
                     /translation="MWQTLSGWQGEEDLWVYAYGSLIWNPEFDFVEQRHSILRGHHRA
                     LCLWSRVNRGTPELPGLVFGLDRGGSCRGVSYRIRARDVPDSFKALWRREMATGAYHP
                     RWLRCATDSGHVRALAFVMDRQNPGYVSDLTEEHAVEIVCRASGRYGPCIDYVVQTHQ
                     ALEAAGIRDGRLARLAERLQERMGTGDNR"
     gene            900..1532
                     /gene="pdxH"
                     /locus_tag="VIC30_11970"
                     /pseudo
     CDS             900..1532
                     /gene="pdxH"
                     /locus_tag="VIC30_11970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004566702.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
     gene            1529..>1990
                     /locus_tag="VIC30_11975"
     CDS             1529..>1990
                     /locus_tag="VIC30_11975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEY7805132.1"
                     /translation="MSAQTPSFNDHQFKQALGRFPTGVTIVTARDKDAMPVGLTVSSF
                     NSVSLTPPLVVWSLKRSSHSLEAFEYCQRYAIQVLAADQLALAARFASGTPAERFAGQ
                     SLVDCPNGTPRLDQACAAWFECYNRHVYDEGDHIVLIGEVEHCAHTERAPLI"
BASE COUNT          467 a          579 c          529 g          415 t
ORIGIN      
        1 tgggtgtcat cggcggcgct catcttgggt gcctggctca cccgagaggg tggccatgtc
       61 agtacaccaa aagctaagga cgagcacaca accgatacaa acctatgatg cgcacaaccg
      121 actcagttac cactgcgtat cacctacccc agccgcaaac ggacgtgaca tggctcaccg
      181 atgccgaacg cgatgcatcg atgtggcaga cactttcggg ctggcaaggt gaggaggact
      241 tatgggttta cgcctacggg tcactgattt ggaatcctga attcgatttt gttgaacaac
      301 gccacagcat cctgcgtggt caccaccgtg cgctgtgcct atggtcacgt gtcaatcgtg
      361 gcacgcctga gctgcccgga ttggtatttg ggctcgatcg cggcggctcc tgtcgtggcg
      421 tcagttaccg aatccgtgca cgtgatgtac cagacagctt taaagccctt tggcgccgcg
      481 aaatggccac gggcgcctat cacccaagat ggttgcggtg cgcgaccgat agcggtcacg
      541 tcagagcctt ggcgtttgtc atggatcgac aaaacccagg ctacgtatcc gacctgaccg
      601 aagagcacgc cgttgaaatc gtatgtcgag ccagtggtcg ttatgggcct tgcatcgatt
      661 acgtggttca gacacatcaa gcactcgaag ctgccggtat tcgagatggg cggctggcac
      721 gcctagccga gcgcttacag gaaaggatgg gcactggcga caacaggtag ccgcacaagc
      781 accaaaacaa gaacaataat cacaacaaaa accgcggaca ttaagctgcc actaaactca
      841 cccccctgcc agcgtattac actggtggta tagataaccc ttacataaaa gccaatacca
      901 tgtccgttgc cgacattcgt cagaactatg aaaaaggcga actcattgag tccgccgcta
      961 aacaatcccc attcgaccag tttgagctct ggctgcacga agccattgag ctgcctgcgc
     1021 ccgaaccgac tgccatgacc ttggccaccg tcaacgcgca gggtaaaccc cgtgcccgag
     1081 tggttctgct caagggtttt gatgcgtaag ggtttgtgtt ctacacaaac tacgcgtcac
     1141 acaaaggcaa cgaactggct cagaacccac aagcgtcgtt gctgtttttt tggcaagcac
     1201 tcgagcgtca ggtgcgcatc gaaggcacag tcgagaaggt cagcgaacaa gagtccgatg
     1261 agtattttca tagccgcccg ctcggctccc gtctcggtgc ctgggcctca gcccaaagcc
     1321 aaccgactac gattgatgct ttgaaggcca aggttgatgc ggtcaccgct gaatatggcg
     1381 ataaaccacc gcgcccacct cattggggtg gctatcgact cagacccgac tacttcgagt
     1441 tctggcaagg acgaccctcg cgcctgcatg accgactaac ctatcagcaa acatctgatg
     1501 gtcagtggtc tttagagcgc ttgtcaccat gagcgcgcag acgccatcct ttaacgacca
     1561 ccaattcaaa caagcactcg gacggttccc aaccggggta acgattgtga cggcacgcga
     1621 caaagacgcc atgccggtgg gattgacggt tagctcgttt aactccgtgt cactgacgcc
     1681 accactggtg gtctggagcc taaaacgctc ttcgcattcg cttgaagcct ttgaatattg
     1741 ccaacgctat gccatacaag tactagcagc cgatcagctt gcgctagccg ctcgatttgc
     1801 cagtgggacg cccgctgagc gttttgccgg gcaatcgctt gtggactgtc ccaacggcac
     1861 accgcgcctc gatcaagcct gtgccgcttg gtttgaatgc tacaaccgtc atgtctacga
     1921 cgagggtgac cacatcgtct tgattggtga ggtcgaacat tgtgcacaca ctgagcgtgc
     1981 gccgctgata
//
LOCUS       DATBNL010000710         3846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148371, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000710 DATBNL010000000
VERSION     DATBNL010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148371"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1335
                     /locus_tag="VIC30_11980"
     CDS             1..1335
                     /locus_tag="VIC30_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006221416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7805133.1"
                     /translation="MMAAADSRIPAPGARIAVVGAGIAGLASAWLLANRYHVTLFEAG
                     SYFGGHSNTVDVTLEGKTHPVDTGFLVHNDLTYPNLIALFELLGVPVHESDMSFGVSI
                     DEPDIEWAGTNLGTVFAQKSNLVKPAFLGMLRDILRFNKAAELYLRDAEVNPMTLGEL
                     LERHGYGQPMRQWYLLPMAAAIWSSSVKDILGFPAQTFLRFCLNHRLLQIENRPQWRT
                     VLGGSREYVKAMLPKIQATHLSCPVQSITRGVGDNGEQVDIVSAAGQQRFDGVVMACH
                     APTTCQILDLQDNERAVLGGIRYQPNTAVLHTDAALLPRRQKVWSAWNYLSDGGSGID
                     GQTQRPVAVSYLINRLQPLPFKTPVVVTLNSHKAPDPEAVIAHFEYDHPVMDTTLIAA
                     KHQLPSIQGQRRTWFCGAWCGYGFHEDGLRSAITVARDFDLPIPWEHNGHGH"
     gene            1325..2203
                     /locus_tag="VIC30_11985"
     CDS             1325..2203
                     /locus_tag="VIC30_11985"
                     /inference="COORDINATES: protein motif:HMM:NF018770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 domain-containing protein"
                     /protein_id="HEY7805134.1"
                     /translation="MVTDAHAAAVAGVMQFCQARVWHKRLRPFKHPLNYNVFSLRLRI
                     DQTEALSQQTNWLFGFNRSRPVSFMNADHGYRDGSDLNVWLANTLAAVDVKHPGGAVW
                     LQTFPRLLGYVFNPVSFWYVHDEAGAVRVIVAEVNNTFGQHHHYVLTAPDGDPIESGQ
                     VLTCQKVFHVSPFCPVTGHYRFERVITERSGTGTEPSTEPTTAYKTVDRMTIDYFDDE
                     AIDEPIIRTGIAVEPEPFTTGRLLRAFLRMPFMTFGVMLRIHWHAFKLWRGGARFHRL
                     PDLPTQEVTSNQGPSR"
     gene            2200..3423
                     /locus_tag="VIC30_11990"
     CDS             2200..3423
                     /locus_tag="VIC30_11990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007175867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEY7805135.1"
                     /translation="MNVNEYALDTQTIRELPWTARAFVNMLNRLKIGSLTLVDPQGRS
                     MLFGKQGQWPHAQLHVHDWRCAGAIIRQGDIGFAESYRKQWVDCPDLLSLFRLALQNE
                     HAVDTVQGSWWALLVKRLAHWVLRDNSKKGSRRNILAHYDLGNDFYKLWLDPTMSYSA
                     GIFADGEHGDLVQAQYAKYDRLLDAIGAEPGQHILEIGCGWGGLAERAAQRGLKVTGI
                     TLSDEQLAYAQARMQGEGLDHLVDLSICDYRDIRGQYDHIVSIEMFEAVGLRHWSSFF
                     TLVRRSLKAGGKAAIQAIDIADEQFDTYVRGTDFIQQYVFPGGMLPSPARFGQLVQDA
                     DMAVQDTYSFGLDYAETLNRWSQQFEAKLEDVRELGFDETFVRIWRMYLAYCEAGFRE
                     QRTDVKQWLLTHKSV"
     gene            3534..>3846
                     /locus_tag="VIC30_11995"
     CDS             3534..>3846
                     /locus_tag="VIC30_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013106787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805136.1"
                     /translation="MASLVLAAGALIYTAPSGASNNATNGTEQPAWESFLPKAGEVGS
                     GEFRWWGFLVYDATLWSPQGEYQPGGPFALSLRYARDGSRDDIVKASIDQMRDLGLPV
                     SR"
BASE COUNT          809 a         1015 c         1079 g          943 t
ORIGIN      
        1 atgatggcag ccgcagattc acggattccc gcgcctggtg cgcgcatcgc cgtcgttggt
       61 gcgggcatcg ccggcttggc cagtgcgtgg ttgttggcta accgctacca cgtcaccttg
      121 tttgaagcgg gcagttactt cggcggccat tccaatacag tggacgtgac ccttgagggt
      181 aaaacccatc cggtcgatac cgggtttttg gtgcacaacg atctgacgta tcccaacctg
      241 attgcgctat ttgagttgct cggtgtaccc gtgcacgaga gcgacatgtc gtttggcgtg
      301 tctattgatg agcccgacat tgaatgggcg ggcaccaacc tcggtacggt gtttgcccag
      361 aaatccaacc ttgtgaagcc tgcgtttctc ggcatgttgc gcgacatctt gcgctttaac
      421 aaagccgctg agttgtactt gcgcgatgcc gaagtcaatc ctatgacgct tggcgagttg
      481 ctcgagcgcc atggctatgg ccaacccatg cgccagtggt atttgctgcc gatggctgca
      541 gccatctggt cttcatcggt caaagacata cttggtttcc ctgcacaaac gtttttacgg
      601 ttttgtttaa accaccgctt gctacaaatc gagaaccgtc cgcaatggcg caccgtctta
      661 ggtggctcgc gtgagtacgt caaggccatg ttgcctaaga ttcaggccac ccatctgagt
      721 tgtccggtgc agtcgatcac ccgtggcgtg ggtgacaatg gcgagcaagt tgatattgtc
      781 agtgccgctg gccagcaacg ctttgatggg gtggtcatgg cctgtcatgc gccaaccacc
      841 tgccagattc tcgacttaca agacaacgaa cgagctgtgc ttggtggcat tcgctatcag
      901 cctaacacgg cggtgctcca caccgatgcg gcgttattgc ctaggcgcca gaaagtgtgg
      961 tcggcctgga attacctgtc agatggtggg tcggggatcg atggtcagac ccaacgcccg
     1021 gtggcggtga gttacctcat caatcgcttg caaccattgc cgtttaagac gcccgtggta
     1081 gtgactttga acagtcacaa agccccagat ccagaggcag tgattgcaca ttttgagtat
     1141 gaccatccgg tcatggacac caccttgatc gcagcaaagc atcagttgcc atcgattcag
     1201 ggtcagcgtc gcacgtggtt ctgcggtgcg tggtgcggtt acgggtttca tgaagacggc
     1261 ttgcgttcgg ccatcacggt tgcgcgtgat tttgatttgc cgattccttg ggagcacaac
     1321 ggccatggtc actgacgcac acgcagccgc agtagccggt gtcatgcagt tttgccaagc
     1381 gcgtgtctgg cacaaacgcc tgcgcccgtt taagcacccc ttgaattaca acgtctttag
     1441 cctgcgcttg cgcattgacc aaacagaggc gctgagtcaa cagaccaact ggctgtttgg
     1501 ctttaatcgg tctcgcccgg tgagcttcat gaacgctgac catggctatc gcgatggcag
     1561 tgatttaaat gtctggcttg ctaacacctt ggctgccgtt gatgtcaaac accccggtgg
     1621 ggctgtgtgg ttacagacct ttccgcgttt gttgggttat gtctttaacc cggtgagctt
     1681 ttggtatgtg catgatgagg caggtgccgt ccgagtgatc gtagccgaag ttaacaacac
     1741 ctttggtcag catcaccact acgtgctgac cgcacccgac ggtgatccga ttgaaagcgg
     1801 gcaagtgctg acttgccaaa aggtgtttca tgtttcaccg ttttgcccgg tcaccggtca
     1861 ctaccgattt gagcgtgtga ttactgagcg cagtggaact ggcaccgaac caagcacaga
     1921 accaaccacc gcctacaaaa ccgtcgatcg catgacgatt gactattttg atgatgaggc
     1981 aattgatgag cccatcattc gcaccggcat tgccgttgaa cccgaaccct ttaccaccgg
     2041 ccgtttattg cgtgcttttt tacgtatgcc gttcatgacc tttggcgtca tgctgcgtat
     2101 ccattggcat gcattcaaac tctggcgcgg tggtgcccga tttcaccgac tacccgattt
     2161 acccactcaa gaagtgactt ccaaccaggg accctcacga tgaacgttaa cgaatacgcc
     2221 cttgacaccc agacaattcg cgaactgcct tggacagctc gcgcctttgt caacatgctc
     2281 aatcgcttaa aaatcggctc gctgaccttg gtcgacccac agggtcgctc catgttgttc
     2341 ggcaaacaag gccaatggcc acatgctcag ttgcatgtgc atgactggcg ttgtgcggga
     2401 gccatcatcc gtcagggtga tattggtttt gcggaaagct atcgcaagca atgggttgat
     2461 tgccctgatc ttttgagcct gtttcgcctt gccctgcaaa acgagcatgc agtcgatacg
     2521 gtgcaaggct cttggtgggc gttgttggtt aagcgcttgg cgcattgggt attgagagac
     2581 aacagtaaga aaggcagtcg gcgcaacatc ttggcgcact atgacttggg caatgatttt
     2641 tacaagcttt ggctagaccc caccatgagc tattcggccg gcatttttgc cgacggcgag
     2701 catggtgatt tggtccaagc ccagtatgcc aagtatgacc gtttgcttga cgccattggc
     2761 gctgagcctg gtcagcacat tctggaaatc ggttgtggct ggggtggctt ggccgaacgc
     2821 gcagcccagc gtggtttaaa agttaccggc atcacactgt ccgatgagca attggcttat
     2881 gcacaggcgc gtatgcaagg cgagggcttg gaccatttgg ttgacctgtc catctgtgac
     2941 taccgcgata tccgtgggca gtatgaccac attgtctcta ttgaaatgtt cgaggccgtg
     3001 ggcctgcgcc attggtcgag cttttttacg ctggttagac gcagtttgaa ggccggtggc
     3061 aaagccgcca ttcaagccat cgatattgct gatgagcagt ttgataccta cgttcgcggc
     3121 acagacttca tccagcagta tgtgtttcca ggcggcatgc tgccaagccc tgcaaggttc
     3181 ggtcaattgg tccaggacgc tgacatggct gttcaagata cctacagctt tgggcttgac
     3241 tatgccgaga cgttaaaccg ctggtcacaa cagtttgagg ccaagcttga agatgttcgc
     3301 gagcttgggt ttgatgaaac cttcgtgcga atctggcgca tgtacctggc ctactgcgaa
     3361 gcgggtttcc gcgaacaacg aacggatgtc aaacaatggt tactgaccca caaaagcgta
     3421 tgaacgaaat gcgtaaccaa catctgaacc agcagacgag caggtgtcat tcagcgcaca
     3481 aagccgcgta cgcacccgca cacaagcccg cgcgacacaa gctgattgcg gtgatggcaa
     3541 gcttggtgct ggcagctggt gcgttgattt atacagcgcc cagtggtgca tccaataatg
     3601 caacaaatgg caccgagcaa ccggcttggg aatctttttt acccaaggct ggtgaagttg
     3661 gcagtggcga atttcgctgg tgggggtttc tggtctatga cgccacgctg tggtcaccac
     3721 aaggtgagta ccagcctggt ggcccgtttg cgttgagttt gaggtatgcg cgcgatggat
     3781 cgcgtgatga cattgttaag gcctcaatcg accagatgcg agatctcggg ttgccggtga
     3841 gccgcc
//
LOCUS       DATBNL010000711         2508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_98051, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000711 DATBNL010000000
VERSION     DATBNL010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98051"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..105
                     /locus_tag="VIC30_12000"
     CDS             <1..105
                     /locus_tag="VIC30_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY7805137.1"
                     /translation="LRVDRISYTYGDRAVELRCGHYLTDQYFYRNTLM"
     gene            241..651
                     /gene="sdhC"
                     /locus_tag="VIC30_12005"
     CDS             241..651
                     /gene="sdhC"
                     /locus_tag="VIC30_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009457694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEY7805138.1"
                     /translation="MSDSATKKRPQFRNISIGQLLKYRLPLAGRLSILHRVSGALMFL
                     LLPVLILPLFAMSMSPTGFEAFAVVASFPIVKIVFLVLIWAYLHHFCAGIRYLALDSH
                     HGLDKYSAQKSAGVVFGASLGLTFVFALKLFGVW"
     gene            654..1037
                     /gene="sdhD"
                     /locus_tag="VIC30_12010"
     CDS             654..1037
                     /gene="sdhD"
                     /locus_tag="VIC30_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003802535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEY7805139.1"
                     /translation="MATPEKIGAKRLVVGAHYGVGDFMIQRITAIILAVYTLILLVGI
                     LMMPGLTYESWVGLFTFSVGGLPLGQLLGTLAFLALSYHAWIGIRDIWMDYVKPVGIR
                     LTLQVLTILWLVGSFIYFAVIIWGA"
     gene            1113..>2508
                     /gene="sdhA"
                     /locus_tag="VIC30_12015"
     CDS             1113..>2508
                     /gene="sdhA"
                     /locus_tag="VIC30_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014111675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEY7805140.1"
                     /translation="MRCSLQLAQAGLSVAVLSKVFPTRSHTVAAQGGIGASLGNMSED
                     SWYWHMYDTVKGSDWLGDQDAIEFMCREAPNAVYELEHFGMPFDRNPDGTIYQRPFGG
                     HTANFGEKPVQRACAAADRTGHALLHTLYQRNVAARTQFFVEWMALDLIRNDDGDVLG
                     VTALEMETGDVYVLEAKTTVLATGGAGRIWAASTNAFINTGDGMGMAARAGIALQDME
                     FWQFHPTGVAGAGVLVTEGVRGEGGILLNKDGERFMERYAPTLKDLAPRDFVSRCMDQ
                     EIKEGRGCGPEGKYVELKLDHLGADTINKRLPSIREIAIKFANVDPIRDPIPVVPTIH
                     YQMGGVPANYHGQVVTWENGESKVVNGLYAVGEVAAVSVHGANRLGTNSLLDLIVFGR
                     AAGNHIVESHPERQHAHQPLPQECIDKSLARFEELEARTTGEKTQDVGNAIRETMQEH
                     CGVFRTVDMLNEGCR"
BASE COUNT          516 a          595 c          717 g          680 t
ORIGIN      
        1 ttgcgagttg ataggatttc ctacacctac ggcgaccgtg cggtagaatt acggtgtggt
       61 cattatctga ctgaccagta tttttatcgc aacaccctga tgtaactggg aattaggtta
      121 atttgagaga tatgcgccaa tcggcgaaaa tacggaaatc caaagtgtgc aatttgcgta
      181 gcaaaataca gacaccagaa ccagtttcac ttattgtttg ttttgaagaa agaggccagc
      241 atgtcagata gcgcaactaa aaagcgcccg caatttcgca acatcagtat cgggcaactc
      301 ctaaaatacc gcctgccttt ggcgggtcgt ttgtcgattc ttcaccgggt cagtggcgca
      361 ttgatgtttt tgttgttgcc ggtcttgatt ctgccgttgt ttgcgatgag catgtcgccc
      421 accggttttg aggcgtttgc ggtcgtggcg agtttcccca ttgtgaagat tgttttcttg
      481 gttttgatat gggcatatct gcaccatttc tgtgcgggca ttcggtattt ggcgcttgac
      541 tcacaccatg gtttagacaa gtactctgct caaaagagcg cgggcgtggt ctttggtgcg
      601 agcctgggtc tgacgttcgt atttgccctc aaacttttcg gagtatggta atcatggcga
      661 cacctgaaaa aattggcgca aagcgattgg tagtcggggc acactatggt gtcggcgact
      721 ttatgattca gcgcattaca gccatcattc tggctgttta tacccttatt ttgttggttg
      781 gtattctgat gatgccaggc ctcacatatg agtcctgggt tggcttgttt acgtttagcg
      841 tcggtggtct gccactaggt cagttgttag gtacattggc ctttttggct ctgtcctacc
      901 atgcttggat tggtatccga gacatctgga tggattacgt caagcccgtg ggtattcgct
      961 tgactttgca agttttgact atcctgtggt tagtcggttc atttatttat tttgcagtca
     1021 ttatctgggg ggcttaaatc gtggtggata cagctaaatc attgcctcgc cgtcaatttg
     1081 acgtggtggt tgtaggcgcc ggtggttccg gcatgcgttg ttctttgcag cttgcccagg
     1141 caggcttgtc tgtggctgtt ttgtccaaag tgttcccgac tcgctcgcac acggtggcag
     1201 cacagggcgg tatcggtgcg tcgcttggca acatgagcga agatagctgg tactggcaca
     1261 tgtatgacac agttaaaggg tcagactggc ttggtgacca agacgccatt gagtttatgt
     1321 gtcgtgaagc cccgaatgct gtctacgagc tagaacactt cggcatgccg tttgatcgca
     1381 atcccgacgg aacgatttat cagcgcccgt ttggcggcca caccgccaat ttcggggaaa
     1441 agcctgttca acgtgcctgt gctgccgctg accgtaccgg tcacgctttg ttgcacacgc
     1501 tgtatcagcg caacgtggcc gctcgcacgc aattctttgt tgaatggatg gcacttgacc
     1561 tgatccgtaa cgatgatggc gacgtgctcg gtgtcacagc gttagagatg gaaaccggtg
     1621 acgtctacgt gctagaagcc aagaccacgg tgcttgccac gggtggtgct ggtcgtatct
     1681 gggccgcttc gaccaacgcc ttcatcaaca ctggcgacgg tatgggcatg gccgcacgtg
     1741 caggtattgc cttgcaagac atggagttct ggcagttcca ccccaccggc gtagccggag
     1801 cgggcgtgct tgtgactgaa ggcgtgcgcg gcgagggcgg tatcttgcta aacaaggatg
     1861 gcgagcgttt catggagcgc tatgcaccga ccttgaagga tttggcacct cgcgattttg
     1921 tttcacgctg catggaccaa gaaatcaagg aaggccgtgg ttgtggtcca gagggcaagt
     1981 acgttgagct caagcttgat cacttgggcg ctgatacgat caacaagcgt ttgccttcaa
     2041 ttcgcgaaat cgcgatcaag tttgccaacg ttgatccgat ccgtgatcca attcctgtgg
     2101 ttccaaccat tcattaccag atgggtggcg tacctgccaa ttatcacggt caagtcgtta
     2161 cttgggaaaa cggtgagtcc aaagtggtca acggtcttta tgccgttggc gaggtggctg
     2221 cggtttctgt gcacggtgcc aaccggttgg gcacgaactc cttgctcgac cttatcgtgt
     2281 ttggtcgtgc cgcgggtaac cacattgtcg agtcgcaccc tgagcgtcaa catgcgcacc
     2341 agccgctgcc gcaagagtgc attgacaagt cgctggctcg gtttgaggag cttgaggcac
     2401 gcaccacggg tgagaaaacg caagatgttg gcaatgccat tcgtgagacg atgcaagagc
     2461 attgcggcgt tttccgtacg gtggacatgc tcaacgaagg ttgccgga
//
LOCUS       DATBNL010000712         2412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148430, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000712 DATBNL010000000
VERSION     DATBNL010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148430"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VIC30_12020"
     CDS             complement(<1..192)
                     /locus_tag="VIC30_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007856012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HEY7805141.1"
                     /translation="MTTLQDITNMQPISLDVLAQKYLKPGEHSAEDIYRRVAKALASV
                     EPKDQVLWQERFLSNLRRGG"
     gene            700..2379
                     /locus_tag="VIC30_12025"
     CDS             700..2379
                     /locus_tag="VIC30_12025"
                     /inference="COORDINATES: protein motif:HMM:TIGR04315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase family octaheme c-type
                     cytochrome"
                     /protein_id="HEY7805142.1"
                     /translation="MKRYVLSGWLCLLMSLASLGAGASDANEPSYTEAPVPGASVKVN
                     SSTADHSKFKELEGPFLNGSEVTRACLSCHTEAAKQIMATKHWSWEYKDPQTGKILGK
                     KSMLNNFCIGDRSNEAFCQSCHVGYGWKDASFDFQAQDKVDCLVCHHTGVGNYKKPAG
                     LAGEVPTKRTEFPPGSGKFFDPVDLALVAQHVGKTSTQTCGTCHYRGGGGDGVKHGDL
                     DSSLDTADRSLDVHMASKSQGGAGFSCATCHESDGHQISGSRIQVAASDPHGARLRGA
                     DDGRSASTCQSCHGNKPHKSEFLQINRLNQHSDKLACQACHVPEFARGGVATKLSWDW
                     STAGKMNEQGKPFELKDSKGNVIYSSKKGDFTVGENVVPSYIWFNGDVEFTTQEDIID
                     PTAVVQINRYMGSADDPNSRIWPVKVMQGKQPYDPVHNRLLVPHTATPDDTGFWYNFD
                     WDKALVAGAQATGVDFSGQYDFVQTEMIWPITHMVAPASQAVSCVACHNSADSRMGDL
                     KGIYVPGRDRVPWMDQIGWLAAALALLGVFGHASLRFIASRRRAHRGKQGE"
BASE COUNT          577 a          570 c          683 g          582 t
ORIGIN      
        1 gccaccgcgc ctcaggttag ataaaaaccg ttcttgccac agcacctggt ctttgggttc
       61 aacgcttgct agtgccttgg caacacgacg atagatgtct tcagccgagt gctcgccggg
      121 tttgagatat ttttgtgcca acacatcaag gctgatgggt tgcatgttgg tgatgtcttg
      181 caaagtggtc atgctggggt ggctccgaag attaggacat gttggtttga tcgaaagtgt
      241 ccgcgtaggg cttgccgctg ggctggtgta catcaaagaa cagaatgtga actctcagtg
      301 tttcaaatca cagcgcttta aacaaggcaa acgtatttga gcgacccagt atgcgtatta
      361 agcgactaag cgctagtttg aagatgggtg cttcagtgcc aagcgatgta ttgaacacta
      421 tatctagagt ctattcagac tttcggttct atatgttgtg ttagatcaaa tcagatggat
      481 gttgtggtga gggctgctga gcaaagcagt gtgcacgagg cgttggcaaa tcaatggcgg
      541 atcgatggca ataggtgatc gagctactca tctaaattga aatagtgcca tggttgattt
      601 taattaagac gttcgtgtga cacctgaggt taactttagg cgtctgaagc agttggcttc
      661 acacaagaat aagatccacg agacggcagg gtactgcaca tgaaacgata tgttctgtct
      721 ggctggcttt gcctgttaat gtcactggct agccttggag ctggggccag cgacgctaac
      781 gagccatcct acactgaggc accggtgcca ggcgcaagcg tcaaagttaa ttcaagcacg
      841 gcagatcaca gcaagtttaa agagcttgaa ggaccgtttc taaatggctc cgaagtgacc
      901 cgggcttgtc tgtcttgcca cacagaggcg gccaagcaaa tcatggccac caaacactgg
      961 agctgggaat ataaagatcc gcagactggc aagatcttgg gcaagaagtc gatgctcaac
     1021 aacttttgta ttggcgatcg ttccaacgaa gcgttttgtc agtcatgtca tgtgggttat
     1081 ggctggaaag acgccagttt tgattttcag gcgcaagaca aagttgattg tctagtttgc
     1141 caccacacgg gcgtgggcaa ctataaaaaa cccgctggtt tggcgggcga ggtgcccact
     1201 aagcgcaccg agttcccgcc tggctcaggt aagttctttg atccggttga cttggcactt
     1261 gtggctcagc atgtgggtaa aaccagtacg cagacctgtg gtacttgcca ctatcgtggc
     1321 ggcggtggcg atggggtgaa gcatggagac ctcgattcgt cacttgatac ggccgatcgg
     1381 tctttagatg ttcacatggc cagcaagtcg caaggtggtg ccgggtttag ctgcgcaacg
     1441 tgtcacgagt ctgacggtca ccagatctcg ggcagtcgca ttcaggtcgc agcatcagat
     1501 ccgcacggcg ctcgcttgcg tggtgccgat gacgggcgtt cggcctcgac ttgtcaaagt
     1561 tgccacggca acaaaccaca caagagcgag tttttgcaga tcaatcgctt gaaccaacac
     1621 agcgacaaac tggcttgcca agcctgccac gttcctgagt ttgcccgcgg cggcgttgcc
     1681 acgaagttgt cttgggattg gtcaacggct ggaaagatga acgaacaagg taagcccttt
     1741 gagctcaaag acagtaaggg caatgtgatc tacagcagca agaaaggcga tttcaccgtt
     1801 ggtgagaacg ttgtgccaag ttacatctgg tttaacggtg atgtcgaatt cacgacacaa
     1861 gaggacatca ttgacccgac cgcagtggtg caaatcaatc gctatatggg ttcggccgat
     1921 gatccgaact cacgcatctg gcccgtcaaa gtcatgcaag gcaaacagcc ttatgacccc
     1981 gttcataatc gtctgctggt tccgcacacg gctacacccg atgacacggg gttttggtac
     2041 aactttgact gggacaaggc gctcgtggcc ggcgcacaag ccacaggagt cgatttcagc
     2101 ggtcagtatg acttcgtgca aaccgaaatg atttggccta tcacccacat ggttgcacct
     2161 gctagtcagg ccgtgtcgtg tgtggcttgt cataacagtg ccgatagtcg catgggtgat
     2221 ctcaagggta tctatgtgcc cgggcgtgac cgagtgccct ggatggatca aattggttgg
     2281 ttagccgcag ctttggcctt gctcggtgtg tttggccatg cgagcttacg ttttatcgca
     2341 tcgcgtcgtc gcgcccaccg tggcaaacaa ggggaataaa gcatgagtac gatgaccgat
     2401 actcaagcgt ca
//
LOCUS       DATBNL010000713         6563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_108292, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000713 DATBNL010000000
VERSION     DATBNL010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6563
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108292"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VIC30_12030"
     CDS             <1..327
                     /locus_tag="VIC30_12030"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEY7805143.1"
                     /translation="AIIASLFILRYLPKTRVGRHLVLSTGLTAESGFTSEPLEEHNLV
                     GKTGAAVSTLRPSGIASIDGKRIDVVSDGEFIEPGESIRVDHVDGNRVVVRRIVNPET
                     STSGEQ"
     gene            327..1310
                     /gene="floA"
                     /locus_tag="VIC30_12035"
     CDS             327..1310
                     /gene="floA"
                     /locus_tag="VIC30_12035"
                     /inference="COORDINATES: protein motif:HMM:NF010186.0"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEY7805144.1"
                     /translation="MIETIFGLFGAFGILIPIIIGLTIILYLVPIPLWIAAWASGAYV
                     GLFTLVAMRLRRVPPATMITARISAVKAGITIPLDDLEAHFLAGGNVVRVVNAMISAD
                     KANIPLTFKRAAAIDLAGRDVLEAVQMSVLPKVIETPRIIAVARDGIQLVCLARVTVR
                     TNIDRLVGGAGEETIIARVGEGMVSTIGSADNHKTVLENPDKISKYILAKGLDAGSAF
                     EILSIDIADVDVGENIGAKLQIDQANADKQIAQAKAEERRAMAVAKEQEMQARVVEAE
                     AEVPLAMAEAFRGGQLGIMDYYRMQNLQADTGMRKNIAGEDDSTPGTLPNT"
     gene            1320..1922
                     /locus_tag="VIC30_12040"
     CDS             1320..1922
                     /locus_tag="VIC30_12040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805145.1"
                     /translation="MAKKQRQKKQGSPFTFIFMAVLAYLAGFPIWIVFIVGLVGLLLW
                     QVQRAQQGSSKLPPLPPAESDTSETETESAPQPRGYNPVPEKLTPAPQTYRETPTQEA
                     PPWAQADYQAYPTEVSTQPARQPTPAMTTRPAARPPIGSTSGTLGRSSRLHPLARNLQ
                     TRDAARQAIIAMTVLGQPRSLQPYEFDPIQQGDVAPPRSS"
     gene            1919..3688
                     /gene="floA"
                     /locus_tag="VIC30_12045"
     CDS             1919..3688
                     /gene="floA"
                     /locus_tag="VIC30_12045"
                     /inference="COORDINATES: protein motif:HMM:NF010186.0"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEY7805146.1"
                     /translation="MSLLRWPLLATLIMAGSLGLSATAHAQSSGPTHGEVALDACNQL
                     AEFPNDPDKQTDGVLVTDIKAQAAITACRSAVQAHPDDGKMLFQLGRAYLAANEQTKA
                     IAAFEQATDKGNVPAQILMASAYYFGMHGVAVDYKKSFALLQNDEVQKNLNAQYILGR
                     LYLLGRDVPKDEETALTWFKRSAEQGDRRSYLNLGIMVWNGEGTAANRQQGLAYVQKA
                     VDLGDKSAIDIAKRMSAQLAQSNNAASSATATNTTTTAAGATAASTSSNATAQASSAA
                     TSAPADPTTEFSGAIMDVLNTIAGTGFLGMIIILLVLIALIGYFVPFRLWITAWASGA
                     YVGLLTLVAMRLRRVPPHSIVKARISAVKAGLSIPLDELESHFLAGGNVVDVVNAIIS
                     ADKANIELTFNRAAAIDLAGRNVLDAVQMSVLPKVIQTPRNAAVAQDGIQLIGVARVT
                     VRTNLDRLVGGAGEETIIARVGEGMVSAIGSAANHKDVLERPDSISKKILANGLDSGT
                     AYEILSIDIADIDVGRNIGAALQIEQANADKQIAQAKAEERRAMAVALEQEMRAKVVE
                     SEAQVPQAMADAFRAGRIYGTPA"
     gene            3738..4760
                     /locus_tag="VIC30_12050"
     CDS             3738..4760
                     /locus_tag="VIC30_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013901323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEY7805147.1"
                     /translation="MSTNQQVILRERPTGWVAPEHFELIATPMPVPQDGEVLVRNHWL
                     SLDPYMRSRISAAKSYAQGVEPGQLMVGGTVGEVIESRSERFAVGDMVLAATGWQQYA
                     ALPAKQALKIETTDVPVSAYLGVIGMPGITAWTGLMTICEPKAGETVVVDAASGAVGS
                     VVGQLAKSLGCHVVGIAGGSTKCRYVIDELGFDACVDHKAVDFEQALDQALDHGINQT
                     ASKGIDCLFENVGGDVFEALLPRMNTFGRVALCGMVSEFNRPPAAHYTLRAILINRLK
                     VQGFIVSDRMDTWPEIRQALHQRVAAGQIKFRESVAHGLENAPAAFVGMLKGENFGKQ
                     LVKLTT"
     gene            4964..5431
                     /locus_tag="VIC30_12055"
     CDS             4964..5431
                     /locus_tag="VIC30_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009516922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY7805148.1"
                     /translation="MKTELTVNGKSVTIEAEPNTLLVQAIREHLGLTGTHVGCDTAQC
                     GACTVMVNGDAVKSCNVLLAQMAGASVMTIEGISSEDGTMHPMQQAFKDCHGLQCGYC
                     TTGMVMSAIDLCNKHPGASEEDIRELLEGNICRCTGYQNIVRAVKQGAADMQA"
     gene            5455..>6563
                     /locus_tag="VIC30_12060"
     CDS             5455..>6563
                     /locus_tag="VIC30_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003078786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY7805149.1"
                     /translation="MGSNDIANLPHIGESVLRKEDERFLTGAGQYTDDIQINNMVYAC
                     FVRSPHAHANIKSIDKAAALAAPGVVAIYDGQDVAADNINGLPCGWLITSTNGEPMKE
                     PPHPILCQGKARYVGDHVAMVIAESLEQARNAAELVDVDYDVLPAVADIRDAGKDGAP
                     TLHDEAPNNHCYKWSIGEKEAVDKAFEQAAHITKLDLVNNRLVPNAMEPRAAIGAYSR
                     ASDEYTLYVSNQNPHVERLLLTAFVMGLPEHKVRVVAPDVGGGFGSKIYLYAEDVCVT
                     WAAKKLNRTVKWTADRTEAFLSDAHGSDHVSHAEMAMDKDGKFLALRVHTDANMGAYL
                     STFSTCIPTILYATLLAGQYTTPQVYVEVDAWFTNT"
BASE COUNT         1573 a         1808 c         1783 g         1399 t
ORIGIN      
        1 gccatcatcg caagcctatt catcttgcgc tacctgccca agacacgggt aggccgacat
       61 ctagtgttgt ccactggcct gacagccgaa agtggcttca cctctgagcc tcttgaagag
      121 cacaacttag ttggcaaaac cggcgctgcc gtgtcaacct tacgaccatc tggcatagca
      181 agcatcgacg gcaaacgtat cgatgtggtg tcagacggcg aattcattga gcctggggag
      241 tctatacgcg tggatcacgt ggatggcaac cgggtcgtcg tcagacgtat cgtcaatcct
      301 gaaacgagta ccagcggaga gcagtaatga ttgaaaccat ttttgggttg tttggtgcat
      361 tcggaatcct cattccgata atcatcggcc taacaattat cctgtatctt gtgccaatcc
      421 cattgtggat tgccgcttgg gcttcaggtg cttacgtagg tttgttcaca ctcgtggcca
      481 tgcggctgcg gcgtgtgcca ccggcgacca tgatcacagc gcgcatcagc gccgttaagg
      541 ccggcatcac cattccacta gacgatctag aagctcactt cttagcgggt ggcaatgtcg
      601 tgcgcgtggt taacgccatg atttcggccg ataaggccaa cattcccttg accttcaagc
      661 gtgccgctgc cattgaccta gctgggcgcg atgtgctcga agcagtacag atgtcggtgt
      721 taccaaaggt gattgaaacg cctcggatca tcgcggttgc tcgcgatggt attcagctag
      781 tgtgtctggc gcgcgtgacg gtacgcacca acatcgaccg cttggttggt ggcgccggtg
      841 aagaaaccat cattgcccga gtcggcgaag gcatggtcag caccattggt tcagcagaca
      901 atcataagac cgtgcttgaa aatccagaca agatatctaa atatattttg gctaaaggac
      961 tggatgccgg ttcggctttt gagatccttt caatcgacat tgcagacgtt gatgttggcg
     1021 agaacattgg tgccaagttg caaatcgatc aagccaatgc cgacaagcag atcgcacaag
     1081 ccaaggccga agagcgtcgt gcgatggccg tggcaaaaga acaagaaatg caggcgcgcg
     1141 tggttgaagc cgaggccgaa gtgcctttgg ccatggccga agctttccgc ggcggccagc
     1201 taggcatcat ggattactac cgtatgcaaa acctgcaagc tgatacaggt atgcgcaaga
     1261 acattgccgg cgaagatgat tcgacgcctg gcaccttgcc caatacataa gcaatcatca
     1321 tggcaaagaa acagcgccaa aagaaacagg gttcgccatt tacgtttatc ttcatggcgg
     1381 ttctggccta tctagcgggc tttccaattt ggatcgtgtt tatcgttggc ttggtcgggc
     1441 ttttgttgtg gcaagtgcaa agagcccaac aaggctcaag caaactgccg cccttgccac
     1501 cggctgaatc agacacatct gagacagaaa cggaatcagc gccgcagcca cgcgggtaca
     1561 accccgttcc agaaaaactg acgcccgcgc cacaaaccta tcgcgagacg ccaacgcaag
     1621 aggcaccacc ttgggcgcag gcagattacc aggcctaccc cacggaagtg tccacgcagc
     1681 ccgcgcgaca accaacgcct gcgatgacaa caaggcctgc ggccaggccg ccgattgggt
     1741 caacgagcgg cacgcttgga cgctcctcgc gcttgcatcc gttggctcgt aatctgcaaa
     1801 cgcgcgatgc tgcacgtcag gccattattg ctatgacggt gcttgggcaa ccgaggtcat
     1861 tgcagcccta tgagtttgat cctattcagc aaggcgatgt tgcgccgccg cggtcgtcat
     1921 gagtttattg cgctggcccc ttctagcgac gttaatcatg gcaggctcgc ttggcttgtc
     1981 ggctaccgca cacgcccaga gtagtggccc aacacacgga gaagtcgcgc ttgatgcatg
     2041 taatcaactc gccgaatttc cgaacgaccc agacaagcaa accgatgggg tcttggtaac
     2101 tgacatcaaa gctcaggctg cgatcaccgc ttgtcggtcc gctgtccagg cacaccctga
     2161 tgacggcaaa atgttgtttc agcttggtcg ggcgtatctt gctgcaaacg aacagaccaa
     2221 ggccattgct gcatttgaac aagccaccga taaaggcaat gtgcctgcgc agatcttaat
     2281 ggcgagtgcg tattactttg gcatgcacgg cgtagcggtt gattacaaga aatcatttgc
     2341 tttgctgcaa aatgacgaag tgcaaaaaaa tctcaatgca cagtacatat tgggtcgcct
     2401 gtatctcttg ggcagagatg tgcccaaaga cgaggaaacc gcactcacct ggtttaagag
     2461 gtccgctgag caaggtgacc ggcgctctta ccttaacctg ggcatcatgg tctggaatgg
     2521 cgaaggaaca gccgccaacc gacaacaggg tttggcctat gtacaaaagg cagtcgatct
     2581 tggcgacaag tcagccatcg acattgccaa acggatgagc gcgcaactgg cacagagcaa
     2641 caacgccgcg agcagtgcca cagcaacgaa tacaacaacg accgcagctg gcgcaacggc
     2701 tgccagcacc tcaagtaacg caaccgccca agcatcatct gcagcaactt ctgcaccagc
     2761 agacccaacc acggagtttt caggagccat tatggacgtt ttaaacacaa ttgccggtac
     2821 cggctttttg gggatgatca tcatccttct ggtcctgatc gcactgatcg ggtattttgt
     2881 cccattccgt ctttggatca ccgcatgggc ctcaggcgcc tacgtgggtc tgctgacgct
     2941 agtggccatg cgcctgcgcc gtgtgccgcc acacagcatc gtcaaagcac gcatcagtgc
     3001 tgtgaaagcc ggcctgagca ttccgcttga tgaacttgaa agccactttc tggctggtgg
     3061 caatgtggtg gatgtggtca atgccatcat ctcggccgac aaggccaaca ttgagctgac
     3121 gtttaaccgg gcagcggcca tcgaccttgc cggacgcaac gtgctggacg cggtgcaaat
     3181 gtcagtgttg cccaaagtta tccagacacc acgcaatgct gcagtcgcac aagacggtat
     3241 tcagttgatc ggtgttgccc gtgtgacggt tcgtaccaat cttgatcgtc tggtgggtgg
     3301 cgctggtgaa gagactatca ttgcccgtgt tggtgaaggc atggttagcg ccattggttc
     3361 ggctgcgaac cataaggacg tactcgaacg gccagacagc atctccaaaa aaatcctcgc
     3421 taacggattg gattcaggaa ctgcctacga aattttgtcc attgatatcg cagacattga
     3481 cgtaggtaga aatatcggcg ctgctttgca aattgagcaa gccaatgccg acaagcagat
     3541 cgcccaagcc aaggccgaag aaaggcgtgc catggcggta gcacttgagc aggaaatgcg
     3601 cgccaaggtg gttgagtctg aagcgcaagt gccgcaagcc atggccgatg ctttccgggc
     3661 cggccgtatt tatggcaccc ctgcctaatg cgcagtaact aacactaact acactgggca
     3721 cacagggagc caaggccgtg agtaccaatc aacaggtgat tttgcgagag cgtccaaccg
     3781 gttgggtggc gcctgaacat ttcgagttga tcgcaacacc catgcctgtg ccacaagacg
     3841 gtgaggttct agtacgtaac cattggttgt cccttgaccc ctatatgcgc agtcgcatct
     3901 cagcggccaa gtcctatgcg caaggtgtcg agcccggaca attgatggtc ggcggcaccg
     3961 tcggtgaggt cattgagtca cgcagcgagc gtttcgctgt cggtgacatg gtgttagccg
     4021 caaccggttg gcaacaatac gcggctctgc cagctaaaca agcgctaaag attgagacga
     4081 cggacgtacc tgtttcagct tatttgggtg ttattgggat gccaggcatc acagcatgga
     4141 ctgggctcat gacgatatgt gaacccaaag cgggtgagac agtggtggtt gacgccgcct
     4201 ctggcgcggt gggctctgtg gtggggcaac tcgctaaatc cttgggttgc catgtcgtgg
     4261 gtattgccgg tggttctacc aaatgccgct acgtgatcga tgaactcggg tttgatgctt
     4321 gtgtggatca caaagctgtc gactttgagc aggcactgga tcaggcgctg gaccatggga
     4381 ttaatcagac agcttcaaag ggcatcgact gcctctttga aaacgtcggt ggtgacgtat
     4441 tcgaagccct gctgccgcgc atgaatacat tcggtcgcgt ggcactttgc ggcatggtgt
     4501 cggaatttaa ccgcccccca gctgcccatt acaccttacg cgctatcctc attaatcggc
     4561 ttaaagtgca aggctttatc gtgtctgacc gcatggacac ctggccagaa attcggcaag
     4621 cgctgcacca acgtgtagcc gctggccaaa tcaagttccg tgaatccgtg gcgcatggat
     4681 tagaaaacgc cccagcggca tttgtcggca tgctcaaagg cgaaaacttt ggcaaacagc
     4741 tggtcaagtt gacaacttaa cgtggcgcac cacccccctg gttgcgccaa tcaataaggc
     4801 gccgctatcg gcgccctact ctcttggtac tttcccctac gtcagtttgt acgtgaatga
     4861 ttgatgaatc gctcagagtc ctctagcatg gggattgaaa aaaattaaaa gcgacttaca
     4921 aagcgaatca gaacgaacct agcgttttct caggagactc atcatgaaaa ccgaactgac
     4981 ggtcaacggc aaatccgtga ccatcgaggc tgagccaaac accctgttgg tgcaagccat
     5041 ccgtgaacac cttggcttga ctggcactca cgtgggctgt gacaccgcgc aatgcggcgc
     5101 ctgtacagtc atggtcaatg gcgatgccgt gaaatcgtgc aatgtcctgc tcgcgcaaat
     5161 ggcgggtgcc tcagtgatga ccatcgaagg catcagcagc gaggacggca ccatgcatcc
     5221 catgcaacaa gctttcaagg actgtcacgg tctgcaatgc ggctattgca ccaccggtat
     5281 ggtcatgagt gcaattgatc tgtgcaacaa acaccccggt gcatcagaag aagacatacg
     5341 tgaattgcta gagggcaaca tctgccgctg caccggctat caaaacatcg tacgcgccgt
     5401 caagcaaggc gccgcggaca tgcaggccta agggcccgcc actaggagac aatcatggga
     5461 tcaaatgata ttgcaaacct gcctcacatc ggtgagtctg tgctgcgcaa agaagacgag
     5521 cgttttttaa cgggcgccgg tcaatacacc gacgacattc aaatcaacaa catggtctat
     5581 gcgtgctttg tgcgttcacc gcacgcgcat gccaacatta aatccatcga caaagcggcc
     5641 gcactcgctg ctcccggtgt ggtggcgatc tatgacggcc aagacgtcgc agccgacaac
     5701 atcaatggcc tgccctgtgg ctggctaatc accagcacca acggcgagcc catgaaagag
     5761 ccgccccacc cgattctttg ccaaggtaaa gcacgctacg tgggtgacca cgtcgccatg
     5821 gtgattgccg agtcgctcga gcaagcccgc aatgccgccg aactcgttga tgtggactac
     5881 gacgtcctac cagccgtggc tgacattcgt gacgctggta aagacggcgc accgaccctt
     5941 cacgacgaag caccgaacaa tcactgctac aaatggtcca ttggtgagaa agaggccgtt
     6001 gacaaagcct ttgaacaagc cgctcacatc accaagctgg acttggtgaa taaccgcttg
     6061 gtgccaaacg cgatggagcc ccgtgcagcc atcggcgcct acagccgtgc ctctgacgaa
     6121 tacaccctct atgtgtcgaa tcaaaaccct cacgttgagc ggttgttgct aacggccttt
     6181 gtgatgggac tacccgagca caaggttcga gtcgtggccc ctgatgttgg cggcggattt
     6241 ggttcaaaga tctatcttta tgccgaagat gtctgtgtga cctgggccgc taaaaaactc
     6301 aatcgcaccg tgaagtggac cgctgaccgc acagaagcct ttttgtctga tgcccacggc
     6361 agtgatcacg tctcgcatgc tgagatggcc atggacaaag acggcaagtt cctggccttg
     6421 cgcgtacaca cagacgccaa catgggtgct tatctctcga cgttctcaac ctgcatcccg
     6481 acaatcctgt acgccacgct gttagctggc cagtacacca cgccacaggt ctatgttgag
     6541 gtcgatgcat ggttcaccaa cac
//
LOCUS       DATBNL010000714         5241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_138223, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000714 DATBNL010000000
VERSION     DATBNL010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5241
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138223"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="VIC30_12065"
     CDS             complement(<1..1011)
                     /locus_tag="VIC30_12065"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013959273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEY7805150.1"
                     /translation="MGKNNSEDGTIMIQGQGVVVYTNRAAVSADTPYGQKRAAVLNAA
                     GFEAAQAEIRQWPGYAPTPMRTLPGLAAELGIQTLYYKDESTRFTLKSFKALGGAYAV
                     FRLIQQAIAKAHPGIMASPADILSGQYRDIVDQLTVTCATDGNHGRSVAWGAQTFGCR
                     CVIYVHATVSQGRADAIAAFGADVIRVEGNYDESVRHAAEQADTNGWTVVSDTTYEGY
                     RDIPIDVMHGYGVMSREMIEQLEDEPPTHVIVQAGVGAFAASVCAAFWLHWGSKRPRF
                     VVVEPTNAACLFESARAGHLVAVDGELETVMAGLACGEVSPMAWEILQGGANDFVTLD
                     DSY"
     gene            1161..1754
                     /locus_tag="VIC30_12070"
     CDS             1161..1754
                     /locus_tag="VIC30_12070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020204343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEY7805151.1"
                     /translation="MHQSYTASKPAVWLTAVSRTSSTAFGSAFVGAALVLTSFLAVAQ
                     ANSDQAQATLQAKSGSNVSGSVTLNQTDSGLRIKADVSGLTPNTEHGFHIHAGDNCNT
                     PDASSAGPHFNPTDKPHGEPESIHSHAGDLPNLKANDQGVATLTTVSPTVSLNPGQAN
                     NVMGRTVVVHAEPDDHHSQPAGNAGARVTCGVIVATD"
     gene            complement(1880..3184)
                     /locus_tag="VIC30_12075"
     CDS             complement(1880..3184)
                     /locus_tag="VIC30_12075"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY7805152.1"
                     /translation="MSSFDIGLIGVVALVVLVFMGMRVFFAAAIVGTLGLVAIIGWES
                     GLGMVGTIPHSKAVTYTLSVLPMFILIGFLAFHAGITESLFDAGRKWLGWLPGGLAVA
                     TGMAATGFAAVSGASTATAAVFARVAVPDMLKYGYSRQLAAGVVAAGGTLATLIPPSA
                     ILVIYAIIVEESVGALLIAGFLPGIVSALIYVALIVGMATVKPDLGKPIRGFTWGQRM
                     KSLPGTFPIFLVIMIIFTAMYEGWATPTEAGALGAAVVFVMALIKGMRWGSLREALME
                     TAKLSVMIFSIIWGVLVFVRFLGFAGLPDAFAKWVVALPYEPIYIVIGILLFYAVLGM
                     FMDAIGMLLLTLPVVYPAVIGLGYDPIWFGIIVVKMAEICLITPPIGLNCFVVNGVRP
                     DIPLNTVFKGVAPFFVADVATIAVLLAFPEIVTWLPTLMMGK"
     gene            complement(3181..3804)
                     /locus_tag="VIC30_12080"
     CDS             complement(3181..3804)
                     /locus_tag="VIC30_12080"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY7805153.1"
                     /translation="MQTHTPPIPPDAPAGLVLADKWLSKVEDAFALLAALCIFLLMLL
                     GIAQVLGRQLFDMPVPGYIDFVELSMVTFAFLAVAYCQRLGGHVRMDLFVRLVHGRTR
                     WLLEFVTTVAPTLLVMVLIYYGWTHFMRAYEFGDSTIDMEIPTWPSKIVVPISFAVLF
                     LRLTIQAIGYGRLLIHPDAAPVAVPMILTEKDIAEKEIEDSLGGERS"
     gene            complement(3912..4946)
                     /gene="dctP"
                     /locus_tag="VIC30_12085"
     CDS             complement(3912..4946)
                     /gene="dctP"
                     /locus_tag="VIC30_12085"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY7805154.1"
                     /translation="MTLNKKLLASALAVSFTAVGFSASAANVEGPEVEWRYSMWGNPR
                     AFTAGIEHLAKRVNEETGGNFTINIGYGEQFSKARENLDSIKLGAVDGASFCNFYHPG
                     KNPAFMVFSLPFLPLGDWDVNVEARQKLFEHPALVADMDRWNGMVYAGAVMPQYEFLG
                     NGKPPKELGDWKGMRVRAGGGIGDAMEKLGAIKTTTTATEVYTSMQRGSMDAASFPYT
                     YAQAAYKIPEVSEWYTTNMSPGTSACPTVFNKTSYEKLPPQYKQLLEDLKPEVYEVQV
                     KAYQDIDKVNLPKFAAELEGVTYTPEQLEEFRAVAAKPVWNEWIEANKDKFNGQELID
                     VVLTTAKQNQ"
BASE COUNT         1329 a         1557 c         1244 g         1111 t
ORIGIN      
        1 atagctatca tcaagcgtga caaagtcgtt agcaccacct tgcaaaatct cccaggccat
       61 gggcgagact tcaccgcaag caagccccgc catcactgtc tcaagttccc cgtcgacagc
      121 caccagatgc ccggcccgtg cgctctcaaa cagacacgcc gcgttggtgg gttcgactac
      181 aacgaaacgt ggccgtttgg acccccagtg cagccagaag gccgcacata ccgacgccgc
      241 aaaggcaccg acaccggctt gcacaatgac atgtgtgggt ggctcatcct ccaactgctc
      301 aatcatctcg cgcgacatca ccccataacc gtgcatcaca tcgatgggga tatcgcggta
      361 gccttcatag gtcgtatctg agacgactgt ccaaccgttg gtgtccgctt gttcggcagc
      421 atgtctgact gattcgtcat aattgccctc tactcgaatg acgtcggcac cgaatgcagc
      481 aatcgcatcg gcccgccctt gactgaccgt agcatgcaca taaatcacgc agcgacaacc
      541 gaatgtctgg gcaccccaag ccaccgatcg cccatgatta ccatcggtgg cacaagtcac
      601 tgttaattgg tcaacgatgt cacggtattg cccactcaga atatctgccg ggctagccat
      661 gatccccgga tgcgctttgg caatcgcctg ctgtatcagc cgaaacaccg cgtacgcacc
      721 accgagtgct ttaaaactct ttaacgtaaa acgtgtgctt tcatccttgt agtacagcgt
      781 ttgaataccg agttcagctg ccaacccagg caatgtgcgc atgggggttg gggcatagcc
      841 aggccattgc ctgatctcgg cctgcgcagc ctcaaaaccc gctgcattca acaccgctgc
      901 acgcttctgg ccatagggcg tatcggcact gactgccgcc cgattggtgt acaccaccac
      961 accctgccct tgaatcatga tggtgccgtc ttcgctgttg ttcttgccca ttcttatcaa
     1021 ccctaatcac catcacccaa atcgattggg cgctttgtat tcacgacttg cacggctatc
     1081 ccatggactg atactttttt gtgacttata gtcacacttc tagtcgcagc atctgactta
     1141 ccttctaaaa aggatacttc atgcatcaaa gctacactgc ctcaaaaccc gctgtttggc
     1201 ttaccgctgt ttcaaggacg tcctcaactg ccttcggttc tgcctttgtt ggtgctgccc
     1261 ttgttttaac cagctttctt gctgtcgccc aagccaacag cgatcaagcg caagctaccc
     1321 tacaagcaaa gtccggctca aatgtatccg gttcagtcac gttaaaccaa accgactcgg
     1381 gtttgcgcat caaggctgat gttagcggcc tgacaccgaa caccgagcac gggtttcaca
     1441 tacacgcggg tgacaactgc aacacaccag atgcctcaag cgccggacca cacttcaacc
     1501 caacagacaa accgcacggc gaaccggaat cgatccatag tcacgccggc gacttgccca
     1561 atctcaaagc caacgaccaa ggcgtcgcaa ccctaaccac cgttagcccg accgtatcgc
     1621 ttaatcctgg ccaggcaaac aacgtcatgg gtcgcacggt tgtggtacac gcagagcctg
     1681 atgaccacca ctcccagcca gctggcaatg ccggggcgcg cgtgacttgt ggcgtcattg
     1741 ttgcaaccga ctgatgtaac cgactaagca cgggtcttca tacaggctgg taccaaagca
     1801 gttcgcttga tgaactacca aacaaaaagc ctcccgatgg gaggcttttt gcaaacaccg
     1861 atctaactat ccttcctggc tacttgccca tcatcagtgt tggcaaccaa gtcacgattt
     1921 cggggaaagc caacaacacc gcaatcgtcg ccacatcggc cacaaagaac ggtgctaccc
     1981 ccttaaacac ggtatttagc ggtatgtccg gcctgacccc gttgaccaca aagcagttca
     2041 atccaatggg tggcgtaatc agacaaattt cagccatctt gaccacgata atcccgaacc
     2101 agatggggtc gtaacctaag ccgatcaccg ctggatacac caccggtaaa gtcagcagca
     2161 acatgccaat ggcatccatg aacatgccga gcacggcata gaacaacaga ataccgatca
     2221 cgatatagat gggttcatag ggaagcgcaa ccacccactt ggcaaacgcg tctggcaatc
     2281 cagcaaaccc caggaaacgt acaaatacca atacgcccca gatgatcgag aagatcatca
     2341 cagagagctt ggccgtttcc atcagggctt ctcttaagct accccagcgc atgcccttga
     2401 tcaatgccat gacaaacacc acggctgccc caagcgcacc cgcctcggtg ggcgtggccc
     2461 agccttcgta catggccgtg aagatgatca tgatgaccaa gaaaatcggg aaggtgcctg
     2521 gcaacgactt catacgctga ccccaggtaa acccacgaat cggcttacct aaatcaggct
     2581 taacggttgc catgcccacg atgagtgcca cataaatcaa cgcggagaca ataccgggca
     2641 agaagccagc gatcaataac gcgccgacag actcttcaac gatgatggcg taaatcacca
     2701 gaatcgcact tggcggaatc aaggttgcca gcgtgccacc ggcggccacc acccctgcgg
     2761 caagctgccg actgtaaccg tacttcagca tgtcaggcac tgccacgcgc gcaaagactg
     2821 ctgcagttgc agtactggcg cctgacacag ccgcaaaccc ggtagccgcc atccccgtgg
     2881 caacggccag accgcccggc aaccatccga gccacttgcg ccccgcgtca aatagcgatt
     2941 cggtaatacc ggcatgaaac gccagaaacc caatcaaaat aaacatcggc aacacactga
     3001 gcgtgtaagt caccgccttg gagtgcggga tggtgccaac catgccaagc ccggattccc
     3061 agccaatgat ggcaaccagt ccgagggtac caacgatggc agccgcaaaa aacacccgca
     3121 tacccatgaa gaccaatacg accagcgcca caacaccgat cagtccaatg tcaaagctgc
     3181 tcatgaccgc tcacccccga gtgaatcttc aatttctttt tctgcgatgt ctttctctgt
     3241 caagatcatc ggaaccgcaa caggcgcggc atcggggtgt attaacaatc ggccataacc
     3301 aatggcctga atggttaagc gtaaaaacaa aaccgcaaat gaaatcggca ccacgatctt
     3361 cgacggccac gtgggtattt ccatgtcaat ggtgctgtca ccaaactcat aagcccgcat
     3421 gaagtgcgtc caaccgtaat aaatcagcac catcactaag agggtcggcg ccactgtggt
     3481 cacaaactcc aacaaccaac gtgttctgcc atgcaccaga cgcacaaaca aatccatgcg
     3541 cacatgtccg cccaaacgct gacagtaagc caccgccagg aaggcaaagg tcaccatcga
     3601 cagttcaaca aaatcgatgt agcccggtac cggcatgtcg aacaactggc gcccgagcac
     3661 ttgcgcgatg cccaacagca tgagcaaaaa aatacagagc gcagccaaga gtgcgaacgc
     3721 atcctcaact ttcgagagcc atttgtctgc gagcaccaat ccggccggcg catccggcgg
     3781 tatcgggggc gtgtgtgttt gcatgttaat cgctgcttat ctatgagcag acaagccggc
     3841 tgacactgtc agccggacct gtccacattt ttaggtttta tgaataacgt ctaaacgagg
     3901 atcaactcgt cttattgatt ttgtttggca gtcgtaagga ccacatcaat cagctcttgg
     3961 ccattgaact tgtctttgtt tgcttcgatc cactcattcc aaacgggctt tgctgcaaca
     4021 gcacggaatt cctcgagttg ttcaggtgtg taggtaacac cttcaagctc agcggcaaac
     4081 ttcggcaggt tgaccttgtc gatgtcctga taggccttga cctgcacctc gtagacttca
     4141 ggcttcagat cctcaagcag ttgcttgtac tgcggtggca gcttctcgta ggatgttttg
     4201 ttaaagacgg ttgggcaagc ggatgtgcca ggtgacatgt tggtggtgta ccactccgag
     4261 acctcaggaa tcttgtaggc cgcttgtgca taggtgtatg ggaaagaagc ggcatccatc
     4321 gaaccacgtt gcatcgaggt gtagacctca gttgctgttg tggtggtctt aatggcaccg
     4381 agcttttcca tggcatcgcc aataccgcca ccagcacgca ctcgcatacc cttccagtcg
     4441 cccaattcct tgggtggctt gccattgccc aagaactcgt attgcggcat cacagcgccg
     4501 gcgtaaacca tgccgttcca gcgatccatg tcagcaacca gtgctgggtg ctcaaacaat
     4561 ttttgacgcg cctcgacgtt tacgtcccag tcaccgagtg gcaaaaacgg caatgagaac
     4621 accatgaatg ctgggttctt tcccggatgg tagaagttac agaaagaagc accgtcaacg
     4681 gcaccgagtt tgatgctatc aaggttttca cgggctttgg agaactgctc accgtagcca
     4741 atgttgatgg tgaaattgcc accggtttct tcattgacgc gcttggccaa gtgctcaatg
     4801 cccgcggtga aggcacgtgg attaccccac atcgagtagc gccattcgac ttctgggccc
     4861 tcaacgttgg ccgctgaggc agaaaagccc acggccgtga aactgactgc taaggccgag
     4921 gccagcaatt tcttgttaag tgtcatgttg tgtctccaaa ctgtgttgag gctgcccgcg
     4981 gcaaaccttc ggttaaagat tttctgttgg cattttcttg tgacttgctc aacagaattt
     5041 tttgcttgat aaaacacccg aatactacta tcgagaacgg gctgtgatta ctggggtaat
     5101 ccccgtgtaa gcaaaacaga aacctttgtt ttgcaatgcg aatgtctcga tcaacaacct
     5161 aatgaagact tgataaacgc cgactcatca aggctggcgg cgggcttttg agacgatgat
     5221 ggttcgtgcc agaaacgcta t
//
LOCUS       DATBNL010000715         1621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_37873, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000715 DATBNL010000000
VERSION     DATBNL010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37873"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            356..>1621
                     /locus_tag="VIC30_12090"
     CDS             356..>1621
                     /locus_tag="VIC30_12090"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY7805155.1"
                     /translation="MTGSAAGVLTVALTVALAGCTGLGAVGPDYQKPEMSLPDQWQDS
                     AQSDVLYNPDLEPPLSQWWHQFGDPDLDWLIETALKDDLSIAQAQARLNQARASRAQA
                     VSALYPEIGTSVRATPTFYGAPESERPDTTQYDAEFDAAWEIDIFGGTRRAIEAAQAA
                     TEASEAALGNIRVSVAAEVAQNYVDLRNSQARLSIAKRNLASQAETLQIAQWRHQAGL
                     ARQTDVAQARASLEQTRASLPDLEIELARANNRLSVLTGQAPGAVNERLSSGRSTDRS
                     LPSLPNTIATGIPTNVLTQRPDLREAERNLAAETARVGQVTARRYPSLNLGGSIGWTA
                     FTLSGIGPADSLIGVLAGTLGATLFDGGRLRSEVDAQTAVQEQALFNYEQTVLQALEE
                     VENALISHALSRQRVQAWASSAQASASAAQ"
BASE COUNT          349 a          424 c          476 g          372 t
ORIGIN      
        1 cgtaactgac acgggatctc aaagatttgt ttagtttcaa aggcttgttt agtgtttttc
       61 tggttttcga accgtacggt agtagcatga cacgtacttg tcgtttcggt gcctgtgtcg
      121 cgagtgtgtg atacggacac atgacttatc gcaagcgggt tgtcggggct gtcaatatat
      181 aattacctta attgaattta ttcggtttgc gttcgtcaat ttcaatggcg atgacagcgg
      241 ttgggttaat cagactcgat gcatcgcaaa cttatggctg gtagcaaggc gatattcact
      301 gatgcaaatc gaggcaagtt tttacaatcg ggtttggcga tggtgtcaac gagtcgtgac
      361 tggctcagcg gcaggtgtgc tgaccgtcgc actgaccgtg gcgctcgcag gctgcaccgg
      421 tctgggggcc gttggccctg actatcaaaa gcccgagatg tctttgccgg atcaatggca
      481 agattctgcg cagtcagacg tgctttacaa ccccgaccta gagccgccat tgtcacaatg
      541 gtggcatcag ttcggtgatc ccgatctaga ttggttgatt gaaaccgcgc tgaaagacga
      601 tttaagcatt gcccaggcac aggccaggct caatcaagcc agggccagtc gcgcgcaggc
      661 agtcagcgct ctgtaccctg agataggcac atcggttcgg gccacaccga ctttctatgg
      721 tgcacctgag tccgagcggc ccgatacaac ccagtatgac gcagagtttg atgctgcttg
      781 ggaaattgat atttttggtg gcacgcgacg cgccattgag gccgcccaag ccgcgacaga
      841 ggccagcgag gcggctttgg gcaacatccg cgtctcagtg gccgctgaag tcgcacaaaa
      901 ctatgtcgat ttgcgcaata gtcaggcgcg tttatcaatt gctaaacgca atctggcctc
      961 gcaagcggaa acccttcaaa tcgctcagtg gcgacatcag gccggactcg ccagacaaac
     1021 cgatgtggcg caagcgcgtg ccagtctcga gcaaacccgc gcaagcctgc ctgatctgga
     1081 aattgagttg gcacgcgcta acaatcggtt gtctgttttg acggggcagg caccgggtgc
     1141 cgtcaacgaa cgcctatcga gcgggcgttc gaccgacagg tcgttgccat ctttgccaaa
     1201 cacgattgcc acgggtatcc cgaccaatgt gctgacccag cgaccggatc tgcgtgaggc
     1261 cgaacgcaac ctagccgcag agaccgcgcg ggttgggcag gtcacagcac ggcgctatcc
     1321 cagtctgaat cttggcggct ctatcggctg gacggcgttt acgcttagtg gcatcggccc
     1381 agccgactcg ttgattggtg ttttagccgg tacgcttggc gccaccctat ttgatggtgg
     1441 caggttgcga agcgaggtcg atgcgcaaac cgcggtgcaa gagcaagcgt tgtttaacta
     1501 tgagcaaacg gtgttgcaag cccttgagga agtggagaac gcattgatct cacacgcatt
     1561 gtctcgtcag cgagttcaag catgggcttc ttctgcccag gcgtcggcta gtgcggcaca
     1621 g
//
LOCUS       DATBNL010000716         3652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_8053, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000716 DATBNL010000000
VERSION     DATBNL010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8053"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /gene="dprA"
                     /locus_tag="VIC30_12095"
     CDS             <1..598
                     /gene="dprA"
                     /locus_tag="VIC30_12095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEY7805156.1"
                     /translation="RIFDKPAVAIVGSRRCSAGASALAFDLAREVASRGWCVVSGLAR
                     GIDTAAHQGALAAGVSGSTIAVFGAGIDVVYPPENTTLARSIVAAGGLLLTAFAPGSP
                     PLAHHFPQRNRLVAGLSRAAVIVQAARASGSMITARLAAELGRDVLAVPGRAGDPLSA
                     GTHDLIRQGAGLLETVDDLWAAFGLYHQSTDQSDKKTR"
     gene            595..1068
                     /locus_tag="VIC30_12100"
     CDS             595..1068
                     /locus_tag="VIC30_12100"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEY7805157.1"
                     /translation="MKILLSSLLTLSFVLTVSAQSIAAQERPCQVIMRVDDSLRFKPA
                     TIDVPATCAEFKVVLRHVGRLPKVASPRNWVLVKASDADAVARVGGAAGSEHDYVKPG
                     DARVLAKSLVIGRDEMTEIDVPVESLVPGETYTYLSTIPGFSPALRGSLTVQPAN"
     gene            complement(1065..1763)
                     /locus_tag="VIC30_12105"
     CDS             complement(1065..1763)
                     /locus_tag="VIC30_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEY7805158.1"
                     /translation="MSDCETLALRVKTVTQQIEAACQQAGRDPSEVTLLPVSKTFGAP
                     TIRAMVELGYKRFGENRLQEIAQKAPELADCDIEWVVIGHVQTNKAKEVAKYASELQS
                     LDRLSLAEALHKRLSALDRTLKVLVQVKTSPEDTKAGLDPSELVPFLRELAQYPSLEV
                     QGLMTMAVLSEDESAVRGCFQLLRHCQQEARAADLPGVTLDRLSMGMSGDMRIAIEEG
                     STEVRVGSAIFGQR"
     gene            1852..3135
                     /locus_tag="VIC30_12110"
     CDS             1852..3135
                     /locus_tag="VIC30_12110"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEY7805159.1"
                     /translation="MRPEFQALDSYVPGLAIALAVGLLIGAEREWSQRYEKSERVMAG
                     IRTFGLLGLLGAVAVLLSDTVGDYAWAFMLAAVGLLVVAGYIAEARATGDWGMTTEVA
                     MLLTFGLGVMAASGDHAMAAGLGVLVAGLLSLKRLLHTQVHRLTPKEVSGALALLFIS
                     VVMLPLLPNQTYGPYDVLNPYVIWWMVVAITGLGFVAYVSMRMAGQRSGILLTSVLGG
                     LVSSTAMTLTLARLSKTLSQPATLSAGLLLSSALMFPRVLVVSAVVAPPLLAVLIWPL
                     ALAMVCYLIGAAWLALASTKHAQGTQQAVDTGLQNPFQIGQALRFTLILVVIMFAVEV
                     ARDYFGDAGVWVMAAISGAADVDAINLSLSRIAGSELSLLLAAQGILIAALSNSLFKL
                     VLAWSIGGNAIGLRTLPFVAAGMLAAGASMGWMAS"
     gene            3269..>3652
                     /locus_tag="VIC30_12115"
     CDS             3269..>3652
                     /locus_tag="VIC30_12115"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEY7805160.1"
                     /translation="MKTILPESLDAKQAYKLLTGVIVPRPIAWVSTLSKNGVTNLAPF
                     SYFTSVANKPPMVGINIGQEYGGRKDTARNILETEQFVVNIAQWPQLDALHASADHHP
                     PETSEIELLGLSTEASTLIKPPRIAE"
BASE COUNT          700 a          943 c         1089 g          920 t
ORIGIN      
        1 gcgcatattc gataagcctg cggttgcgat tgtgggtagc cgccgttgca gcgccggtgc
       61 aagcgctctg gcctttgatt tggcgcgcga agtggcaagc cgtggatggt gtgttgtcag
      121 cggcttggcg cgtggcatcg acacggccgc ccatcagggc gctctggccg ctggtgtgtc
      181 tggcagtacg attgccgtct ttggtgcggg cattgacgtg gtctatccgc ctgagaacac
      241 cacactggca cgctcgatcg ttgctgctgg cggtttgctg cttacggcct ttgcaccggg
      301 gtcaccacca ttggcacacc acttcccgca acgcaaccga ctcgtcgcgg gattaagtcg
      361 tgccgcggtg attgtgcagg cagcgcgcgc tagcggatca atgattaccg cacgactggc
      421 cgccgagctg ggacgcgatg tgttggctgt gccaggccga gccggtgacc cattgagtgc
      481 gggcacccat gatttgattc gtcagggggc ggggctattg gagacagttg atgatttgtg
      541 ggcggcgttt ggcttgtatc atcaaagcac tgaccaaagc gataaaaaga cacgatgaag
      601 attttattga gttccctgct gacactgtcg tttgtgctca ctgtctctgc tcagagcatc
      661 gcggcgcaag agcgaccttg ccaggtaatt atgcgggtcg atgactcact gcggtttaag
      721 ccggccacga tcgatgtgcc agcgacttgc gcggaattta aagtggtgtt gcgccatgtg
      781 ggtcgcctgc ccaaagtggc gtcaccgcgc aactgggtgc tggtcaaagc cagtgatgcc
      841 gatgcagtgg cgcgcgtagg tggcgccgct ggttctgaac acgactacgt caagccaggc
      901 gatgcgcgtg tgttggcgaa aagcttagtt atcggtcgcg atgaaatgac tgaaattgat
      961 gtgcctgttg agtcgttggt acccggtgag acctacactt acctatccac aattcctggg
     1021 ttctccccag ccttgcgtgg ttcattgacg gtgcaaccgg ctaattaacg ctgcccaaaa
     1081 attgcactgc cgacacgaac ttcggtggat ccttcttcaa tggcaatgcg catgtcgccg
     1141 ctcatgccca tggacagccg atcaagtgtt accccgggta aatcagctgc gcgcgcctct
     1201 tgctggcaat gacgcagcaa ctggaaacat cccctaaccg ctgactcatc ctcggacaag
     1261 acagccatgg tcatcaagcc ttgcacttcc aggctcgggt actgtgcaag ttctcgtaaa
     1321 aagggtacta gctcagaagg atccagccct gccttggtgt cttctggtga ggttttcact
     1381 tgaaccagca ctttgagtgt tcggtctagc gctgacaatc gtttgtgcaa agcctcggcc
     1441 aatgacaaac gatccagcga ctgcagttcg ctggcgtact tagcgacttc cttggctttg
     1501 ttggtttgca catgaccaat gaccacccat tcgatgtcgc agtctgccaa ttcaggggct
     1561 ttttgagcga tctcttgtag ccggttttca ccgaagcgtt tgtaaccgag ctcaaccatg
     1621 gcacgtatgg ttggtgcgcc aaatgtcttg ctgactggca gcagcgtgac ctctgacggg
     1681 tcacgaccgg cttgttgaca agctgcttcg atttgttgcg tgacggtttt gacgcgtaac
     1741 gccaaagttt cgcaatctga cacgttggtt taccttgagt gtggaaagaa tcatacttaa
     1801 cgccaagcgt atcatcgaaa ctgacaaaac cttgtgtaga ccgagccatg tatgcgtcct
     1861 gaatttcaag ccctagacag ctatgtacca ggcttggcca tcgccttggc agtgggcttg
     1921 ctgatcgggg ccgagcgcga gtggagccag cgatatgaaa aaagtgagcg tgtcatggcg
     1981 ggcattcgca cctttgggtt gttggggctg ctcggagcag tggccgtttt actgtccgac
     2041 accgtcggtg attatgcctg ggcgttcatg ttggcagccg ttgggctgct ggtggttgcc
     2101 ggatacattg ctgaggcacg cgccactggt gactggggaa tgactaccga agtggcgatg
     2161 ctgttgacgt ttggcctagg cgtcatggca gcttcgggtg accatgccat ggctgcgggg
     2221 ctaggtgtgt tggtggcagg tctgctcagc ctgaaacggc ttttgcacac acaagttcat
     2281 cgtctgacgc cgaaagaagt ctcgggtgct ttagcgctct tgtttatttc tgtggtgatg
     2341 ttgcccctgc tgccaaacca gacttatggt ccttacgacg tacttaatcc ttacgtcatt
     2401 tggtggatgg tggtggccat cacgggctta gggtttgtgg cctacgtcag catgcgcatg
     2461 gccgggcaac gcagtggcat tttattgacc tcagtgctcg gtggcttggt gtcttcaacg
     2521 gccatgacac taactttggc gcgcctgtct aaaaccctgt cgcagcccgc cactttgtca
     2581 gccggtttgt tactaagctc ggcgctcatg tttcccagag tgttggtggt cagtgcggtc
     2641 gttgcgccgc cgctgctggc ggttttaatt tggccgctgg cactggccat ggtctgttat
     2701 ctgataggtg cggcctggct agctctggca agcaccaaac acgcgcaagg cacccagcag
     2761 gcggtcgata cagggctaca aaacccgttt caaatcggtc aagcattgcg tttcacgctg
     2821 attctggtgg tcatcatgtt cgccgttgaa gtggcgcgag actatttcgg ggatgctggc
     2881 gtttgggtca tggcggctat ctcgggggca gccgatgttg atgctattaa tttgtctctc
     2941 tcgcgtatcg cgggtagtga gttgagcttg ttgctggctg cgcaggggat tttgattgca
     3001 gcgttatcca acagtttgtt caaactggta ctggcctggt cgattggtgg caatgccatt
     3061 ggcttgcgta ccttgccgtt tgtcgcggcc ggcatgttgg ccgctggtgc atcgatgggg
     3121 tggatggcta gttaaagcac tttagcctcg ttgcggccct aggttatgag tttgcaatgt
     3181 gttttttgcg ggtcatggca ttgagttgtc tgcagcgtta aagtgagttc gtctttgtat
     3241 accaaccgca ctgtggagca cgtcgcccgt gaaaaccatc ctacccgaat cactcgatgc
     3301 caaacaggcc tataagctgc taaccggggt cattgtgcct aggccgattg cctgggtgag
     3361 cacactgtca aaaaacgggg tcaccaactt agcgcctttt agctacttca ccagtgtggc
     3421 caacaaaccg cccatggtgg gcatcaacat tggccaagaa tacggcgggc gtaaggacac
     3481 ggctagaaac atattggaga ccgagcagtt tgtggtcaac atcgcgcaat ggccacagct
     3541 tgatgcgttg catgccagtg cggatcatca tccgcctgag accagtgaaa tcgagttgct
     3601 cgggttaagc actgaggcct ctaccttgat caagccgcca cgcattgccg ag
//
LOCUS       DATBNL010000717         2826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_78230, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000717 DATBNL010000000
VERSION     DATBNL010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78230"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VIC30_12120"
     CDS             complement(<1..185)
                     /locus_tag="VIC30_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011883057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEY7805161.1"
                     /translation="MLLIPAIDLKDGQCVRLRQGDMDDATVFSADPVEVAQRWADLGA
                     KRLHLVDLNGAVDGRPR"
     gene            complement(222..863)
                     /gene="hisH"
                     /locus_tag="VIC30_12125"
     CDS             complement(222..863)
                     /gene="hisH"
                     /locus_tag="VIC30_12125"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEY7805162.1"
                     /translation="MKRIAIVEYGMGNYHSVERALRHAAPDARIELTGDAQSILAADR
                     VVLPGQGAMGDCMQTLAQAGLTEVMLSVAKTKPLLGVCVGEQMLFERSDEGPTACLGL
                     LPGVVKRFSGPMFEEAAGGERLKIPHMGWNPVKQTQAHPLWAGIADRAPFYFVHSYHV
                     QASDPAVIVGQADYGYPFTCAVAKDNIFAVQFHPEKSAADGLRLYRNFVDWNP"
     gene            complement(898..1485)
                     /gene="hisB"
                     /locus_tag="VIC30_12130"
     CDS             complement(898..1485)
                     /gene="hisB"
                     /locus_tag="VIC30_12130"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEY7805163.1"
                     /translation="MRTAEIIRNTKETQIRVAINLDGTGAQSIDTGVPFLDHMLDQIA
                     RHGLIDLDIKASGDLHIDDHHTVEDVGIALGQALAQAWGDKAGIRRYGHAYVPLDEAL
                     SRVVIDLSGRPMLTFEVLYTRARVGNFDVDLSREFFQGLVNNAWMTLHIDNLRGINAH
                     HQCETVFKAFGRALRMAVEHDPRQAGAIPSTKGVL"
     gene            complement(1974..>2826)
                     /gene="hisD"
                     /locus_tag="VIC30_12135"
     CDS             complement(1974..>2826)
                     /gene="hisD"
                     /locus_tag="VIC30_12135"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY7805164.1"
                     /translation="IPAKVAGVAEVIMVTPTPDGQRNALVLAAAAIGGVDRIFAVGGA
                     QAVGALAYGTETIPAVDKIVGPGNAYVASAKRRVFGTVGIDMIAGPSEILIICDGQTP
                     ADWIAMDLFSQAEHDELAQAILLCPDAAFLEQVQASIERLLPTMPRQDIIATSLKNRG
                     ALVLVDSLQQACDISNRIAPEHLEVSVEDPKALLPALRHAGAIFMGRHSSESLGDYCA
                     GPNHVLPTSGTARFSSPLGVYDFQKRSSIIDVSAQGATELGEVARVLAEGEGLPAHAQ
                     SAVYRMA"
BASE COUNT          669 a          826 c          725 g          606 t
ORIGIN      
        1 ttgcgtgggc gaccatcaac agcgccgttt aaatccacca ggtgtagccg cttggcaccg
       61 aggtcagccc agcgttgcgc cacctcgaca gggtcagctg agaacaccgt ggcatcatcc
      121 atgtcgcctt gacgcaggcg tacacattgg ccgtctttca aatcaattgc aggtatcaat
      181 aacatggcat gaaggggggg ttgacgttta agagcgtgag ctcaagggtt ccaatctaca
      241 aaattacggt aaagccgtaa accatcagcg gcactttttt ccgggtgaaa ctgcacagca
      301 aagatgttgt ctttcgccac agcgcaggta aacggataac cataatcggc ctggccaacg
      361 atcacggccg gatctgatgc ttgaacgtgg taactgtgca caaagtaaaa aggcgctcgg
      421 tcggcaatcc cagcccatag aggatgcgcc tgggtttgtt taaccggatt ccaacccata
      481 tgagggattt ttaaccgctc gccgccagcc gcctcttcga acatggggcc gctaaaccgc
      541 ttaaccacgc caggtaacaa accgagacag gctgttggac cctcatcgct gcgctcgaac
      601 aacatctgct cacccacgca tacgcccaat agcggcttgg ttttagccac tgacagcatc
      661 acctcggtca agccagcctg tgccagtgtc tgcatgcagt cacccatagc accctgaccc
      721 ggcaatacca cacggtctgc agccagaatc gattgcgcat cacctgtcag ctcaatacgg
      781 gcatcggggg cggcatgtcg cagggctcgc tcaacagagt gatagttacc catgccatat
      841 tcgacaattg caatgcgctt catgatgcct tgagctcgcg ggccttaaat cgggtgctta
      901 gagaacacct ttggtcgaag ggatggcacc ggcttggcgt gggtcatgct cgactgccat
      961 gcgcaacgcg cgaccaaagg ccttaaaaac cgtctcacat tggtggtgcg cattgatgcc
     1021 gcgtaggttg tcaatgtgca gggtcatcca ggcgttgttg accagcccct ggaaaaactc
     1081 acgggacaaa tcaacatcga agttaccaac gcgtgcacgc gtatacagca cttcaaaggt
     1141 gagcatgggg cgtcctgaca aatcaatcac cacgcgcgag agcgcctcat cgagcggcac
     1201 gtaagcgtgc ccgtagcgac gaatgcctgc tttgtctccc caagcttggg ccaaagcctg
     1261 acctaacgca atcccgacat cttcaacggt gtggtgatcg tcaatgtgaa ggtcaccgct
     1321 tgccttgatg tcaagatcga tcaagccatg acgtgcgatt tgatcgagca tgtggtccag
     1381 aaacggcaca cccgtgtcaa tcgactgcgc gcccgtgccg tcaaggttga tggcgacacg
     1441 aatttgcgtc tctttggtgt tgcggataat ttcagcagtt cgcatgatga tcttgagctt
     1501 aagtcgtact gggaaacggt cacattaaaa acctgatttt gacatcctcc ccgtcctgaa
     1561 cgacgaggat tcctcgcggc ttcatcaagc cgccaagatt gggcatgtat cgctacttcc
     1621 cattggttcc tgcttcatcg ttaaaaccaa cgtttcaact ccacaggcta tcacccgatg
     1681 ccctcgggct acatttaaag cgccaaccga gtcggcgttt tccgtataac cgcactcaac
     1741 acatttaaat cttgactctg tggtgggatt ggccctgaat ttaaaggctt tacggctcac
     1801 tttcacactg acaacgagtg tatcaaagac actgaggata cgatagacca agatgacata
     1861 aaaaccaaaa aactgacata taggctgcgc cagcgtttac atccccgtcc tgaagaacgc
     1921 ggctttacgc gctaaacggt taagcggctt gcagcctttg taggcggctt ggcttacgcc
     1981 attcgataca cggcgctttg ggcgtgcgct ggcaaacctt caccctcagc aagtacacgc
     2041 gcgacttctc cgagttctgt ggcaccttga gctgagacat caatgatgct cgagcgtttc
     2101 tgaaagtcat aaacacccaa gggcgatgag aagcgggctg tacccgatgt tggcagcaca
     2161 tggttcggcc ccgcgcagta atcgcctagc gactctgagc tgtggcgacc cataaaaatc
     2221 gcgccggcat gtcgtagcgc tggcaacaat gccttggggt cttctaccga cacctcgagg
     2281 tgctcaggtg caatgcgatt gctgatgtca caggcctgct gcagcgaatc caccaatacc
     2341 aatgctccgc ggttctttag actggtggcg atgatatctt ggcgtggcat ggtcggcagc
     2401 aaacgctcaa tcgacgcttg cacttgctca agaaacgccg catctgggca caatagaatc
     2461 gcttgcgcca actcatcgtg ctcggcctgc gagaataaat ccattgcaat ccaatcagcc
     2521 ggcgtctggc cgtcacagat aatcaggatc tcactgggcc cggcaatcat gtcaatgcct
     2581 acggtgccaa acacgcgccg cttggcactg gccacatagg cgttgcctgg ccccacaatc
     2641 ttgtcaaccg cagggatcgt ttctgtaccg tacgccagcg cgccgaccgc ttgcgcccca
     2701 cccaccgcaa aaatccggtc cacgccacca atggcggccg cggcaagcac caacgcattg
     2761 cgttgcccat caggcgtggg ggtcaccatg atgacctcag ctacgcctgc cactttggct
     2821 ggaatc
//
LOCUS       DATBNL010000718         4022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_168434, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000718 DATBNL010000000
VERSION     DATBNL010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4022
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168434"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="VIC30_12140"
     CDS             <1..713
                     /locus_tag="VIC30_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEY7805165.1"
                     /translation="AVSAKNHDKAEAFVQTLAHPVPVLRIDELEPRADLVVECAPAAL
                     LSDIVTPFMKTGKQAIVLSVGALLFQDHLREVASVHGGTIMVPTGALLGLDAVIAAAE
                     GQIHTVRMVTRKPPAGLKGAPHLVEHNISVDGLTQPLKVFEGNARDAAKGFPANLNVV
                     VALALAGVGADNTLLEIWADPTVTRNTHTIEVDSDSARLTMTIENIPSENPKTGRIVA
                     QSVVAMLRKMQGSLRVGT"
     gene            824..1993
                     /locus_tag="VIC30_12145"
     CDS             824..1993
                     /locus_tag="VIC30_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7805166.1"
                     /translation="MDFELTSRQKELQQRTREFIAQKIIPLESDPRLGAHGPQESLRQ
                     ELVGLARDAGLLTPHASEEMGGLGLSHIDKAIVFEEAGYSRLGPTALNIHAPDEGNIH
                     LMEAIATPEHKERWLRPQVQGHTRSCFAMTEPDGAGADPSMLATTAVRDGDDYVINGN
                     KWFITGAHGASYVIIMAKLEDGAATMFLADMDTPGIELVRQMDAMDKCFTGGHAVMRF
                     NNLRVPATQVLGELGKGFRYAQIRLAPARLTHCMRWLGQARRAHDIATEYARTRQAFG
                     KPLGKHEGVGFMLADNDMDLQTARLHIWHTAAVLDRGEMANFESSRAKVVCSEAEWRV
                     VDRCVQILGGQGVTGETELMNIFTDMRSFRIYDGPSEVHRWSMARKILDGKAPQS"
     gene            1990..2769
                     /locus_tag="VIC30_12150"
     CDS             1990..2769
                     /locus_tag="VIC30_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013721235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7805167.1"
                     /translation="MSEAMNTMFRLDGKIALVTGASSGLGWHFAKVLAQAGAHVVVAA
                     RRKERLQALCDEITAQGGQASAVTLDVTDAQSVTGCFDACEKVAGVPDIVISNAGTTV
                     TKMAIDQTPQDFDQVMNANLRGCWLVDTEAARRLINAQKPGSIINIASILGQRVAAAV
                     APYAISKAGVIQATKAMALEWARYGIRVNALLPGYVRTELNGEFLDSEVGEKLRKRIP
                     SRRFNALEDLDGPMLLLASDAGRAMSGATVEVDSAHLVSGL"
     gene            2766..3812
                     /locus_tag="VIC30_12155"
     CDS             2766..3812
                     /locus_tag="VIC30_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011803698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEY7805168.1"
                     /translation="MSQAVELDEQAWQRLGDYLFGEGVTPAPEVTATLLTGGQSNPTY
                     RLQIGAQTFVLRKKPSGDLLPSAHAIDREYRVMKALQDTAVPVPEMLIYCEDTSLIGT
                     PFYVMPFLKGRVFFDQTLPHMTREQRAAVYADMNRAIAALHRIDPSEVGLADYGKAGN
                     YFARQIGRWSRQYQEHHTDRINAIEQLIEWLPDRVPAGDITTIVHGDYRLDNVMLHET
                     EPRAIAVLDWELSTLGHPLADFSYHCMSWHIPPTLWRGIGGLDLAALGIPSERDYVEQ
                     YIAATGYEGVQEHWDFYLAYNFFRIAAILYGIGERARQGTATAADALEMASKAQPLAE
                     IGWHYAQQYQAGRQ"
     gene            3814..>4022
                     /locus_tag="VIC30_12160"
     CDS             3814..>4022
                     /locus_tag="VIC30_12160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013395815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805169.1"
                     /translation="MHKGELGAVGDVGEAMDLGRDAANFLPLTPLNFLDRASQVYPER
                     VALIHGDLRQTWRQTDQRCRQLASAL"
BASE COUNT          878 a         1044 c         1206 g          894 t
ORIGIN      
        1 tcgccgtatc tgccaagaat catgacaagg ccgaggcctt tgtccagaca ttggcgcatc
       61 cggtaccggt attgcgcatt gacgagctag agcctagggc agacctggtg gtcgagtgtg
      121 cgccggcagc tttgctctcg gatattgtca cgcccttcat gaagactggc aaacaagcca
      181 ttgtgctctc ggttggtgca ttgttgtttc aagatcatct gcgcgaggtg gcgagtgtgc
      241 atggcggcac catcatggtg ccaaccggtg ctttgcttgg gcttgatgcc gtgattgctg
      301 cagccgaagg gcagatccac acggtgcgta tggtgactcg taaaccgcca gctggtctaa
      361 aaggcgcgcc ccatctggtt gagcacaaca tcagtgtcga cggcttgacg cagccactca
      421 aagtatttga gggtaatgcg cgcgatgcag ctaaagggtt tcctgccaat ctaaatgtag
      481 tcgtggcact ggcactcgca ggcgttggag cggacaacac tttgcttgaa atctgggcag
      541 atccgacagt gacgcgcaac acgcacacca ttgaggttga ctccgattcg gcccgtttga
      601 ccatgaccat tgagaacata ccctcagaga accctaaaac cggtcgcatt gtggcgcaaa
      661 gcgtcgtggc tatgctacgc aaaatgcagg gcagcctgcg tgtaggtacc taacttcagg
      721 acagcgcact ttcactgttg actgcctccc cgtcctgaaa aacggggctt tacgcgctgg
      781 atggtaaatt tcgacaagag aacatcacga acaggggatc agcatggact ttgaattgac
      841 gtccagacaa aaagaactgc agcaacgaac cagagaattt attgcccaga agatcattcc
      901 tttggagtcc gaccccaggc taggggcaca tggtccccaa gagtctctcc gtcaggaact
      961 cgtgggactt gcccgcgacg ccgggctgct cacaccgcac gcatccgaag agatgggcgg
     1021 gctgggttta agccacatcg acaaagcgat tgtgttcgaa gaggctggct actctcgctt
     1081 agggcccaca gcactcaaca ttcatgcacc ggacgagggc aatattcatt taatggaagc
     1141 gattgccacg cctgaacaca aagagcgctg gttgcgcccg caggtacagg ggcatacgcg
     1201 gtcgtgcttt gccatgaccg agccagatgg tgcgggtgct gacccttcga tgttggccac
     1261 gactgccgtg cgcgatggcg atgactacgt cattaacggc aacaagtggt ttattaccgg
     1321 tgcacacggc gcgtcgtacg tcatcatcat ggccaagctc gaagacggtg cagccaccat
     1381 gttcttagcc gatatggata ccccgggtat tgagcttgtg cgccagatgg acgccatgga
     1441 caagtgcttt accggcggtc acgcggtgat gcgttttaac aacctgcggg taccggctac
     1501 tcaagtgctc ggtgagctgg gcaaagggtt tcgttatgcg cagattcgcc tggcaccggc
     1561 gcgtctgacc cactgcatgc gctggctcgg tcaggctaga cgcgcccacg atatcgccac
     1621 cgaatacgcc agaacgcgtc aggcgtttgg caagcccttg ggcaagcacg aaggcgttgg
     1681 ttttatgttg gctgacaacg acatggattt gcaaacggcg cggttgcata tctggcatac
     1741 cgctgcggtg ctagatcgcg gtgaaatggc caactttgag tcaagccgtg ccaaggtggt
     1801 gtgttcagag gccgagtggc gggtggttga ccgctgcgtg cagattttag gtgggcaagg
     1861 cgtcaccggc gagactgagc tcatgaacat cttcaccgat atgcgttctt tccgcattta
     1921 tgacggtccg agtgaagtgc atcgttggag catggccaga aagatccttg acggcaaggc
     1981 gccacagtca tgagcgaagc gatgaacacg atgtttagac tcgatggcaa gattgccttg
     2041 gtcacgggtg cctctagcgg tttggggtgg cattttgcga aggtgctcgc gcaagctggc
     2101 gcccatgttg tggtggcagc ccggcgcaag gagcgcttac aggccttgtg cgatgagatc
     2161 accgcccaag gcggacaagc cagtgcagtg accttagacg tcaccgatgc gcagagcgtg
     2221 acgggttgct ttgatgcctg cgagaaagtt gcgggcgtac cagatattgt gatcagtaat
     2281 gccggtacga cggtcaccaa gatggccatt gaccagaccc cgcaagactt cgatcaagtc
     2341 atgaatgcca atctgcgcgg ttgctggcta gtagatactg aggcagccag acgactgatc
     2401 aacgcacaaa agcctggcag catcatcaac attgcttcca ttcttggtca acgcgtggct
     2461 gctgctgtgg cgccttacgc gatttctaag gcgggcgtga ttcaagccac caaggccatg
     2521 gcattggagt gggcgcgcta tggcattcgc gtcaatgccc tgttaccggg gtacgtgcgc
     2581 accgaactca atggtgagtt tctcgacagt gaggttgggg agaagctgcg caagcgaatt
     2641 cctagtaggc gctttaatgc gctagaagac cttgatggac cgatgctgct gttggcctcg
     2701 gatgccggtc gtgccatgag cggtgccacc gtggaagtcg atagcgcaca tctggtgagt
     2761 ggtttatgag tcaggcggtt gagctcgacg agcaagcgtg gcaacggctc ggtgactatc
     2821 tgtttggcga aggtgtcacg ccagcgccgg aagtcacagc gacgttactg actggtggtc
     2881 agtccaatcc aacgtaccgt ttgcaaatcg gtgcacaaac gtttgtgttg cgcaaaaaac
     2941 cgagcggtga cttgttgccc tcggcgcatg ccattgaccg tgaataccgc gtcatgaagg
     3001 cattacagga cacagccgtg cccgtgcccg agatgctgat ctattgcgag gatacgtcac
     3061 tgattggtac ccctttttat gtcatgccgt ttttaaaagg cagggtattt tttgatcaga
     3121 cgttacctca tatgacccgt gagcagcggg ccgctgtcta tgctgacatg aaccgtgcca
     3181 ttgccgcttt gcaccgcatc gatccgagtg aggtgggttt ggcagactac ggcaaggcgg
     3241 gtaactattt cgcgcgtcag attggtcgtt ggagccggca gtatcaagag catcacaccg
     3301 atcggattaa cgccattgag caattaattg agtggctgcc tgatcgcgtt cctgccggag
     3361 acatcaccac catcgtgcat ggtgactatc ggttggacaa cgtcatgttg catgaaaccg
     3421 aaccccgagc gattgcggtt ctcgattggg agttgtcaac gttgggccat ccgttggcag
     3481 acttttctta tcactgcatg agctggcaca taccaccgac gctgtggcgc ggcattggcg
     3541 gtcttgacct ggccgcactt ggcatcccta gcgaacgtga ctatgttgag cagtacatcg
     3601 cagccacggg ttacgaaggg gtccaagagc actgggattt ctatttagcc tacaactttt
     3661 tccggattgc ggcgatactc tacggcatcg gtgaacgggc caggcagggc acggccaccg
     3721 cggctgatgc gctagaaatg gcgtctaaag ctcaaccgct tgctgagatc ggctggcatt
     3781 acgcacaaca atatcaggca gggagacagt gagatgcata agggtgagtt gggtgccgtg
     3841 ggtgacgtgg gtgaggcgat ggatctaggc cgagatgcgg ccaatttttt accgctaaca
     3901 cctttgaatt ttttggatcg cgcctcgcaa gtctatcccg agcgcgtggc gttaattcac
     3961 ggtgatttac gtcagacctg gcgtcaaacg gatcagcgtt gccgacagct tgccagtgca
     4021 ct
//
LOCUS       DATBNL010000719         1758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_118039, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000719 DATBNL010000000
VERSION     DATBNL010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118039"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..654
                     /locus_tag="VIC30_12165"
     CDS             13..654
                     /locus_tag="VIC30_12165"
                     /inference="COORDINATES: protein motif:HMM:NF028235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HEY7805170.1"
                     /translation="MINALISGKHKIDDGAQAPNGKRALNRAKLLRTGAELLSEQSYA
                     CTGVDHIIVKTGLTKGTFYHYFKSKEQFALEVVDLYADYFNQKLDTYLLNDSQPPLER
                     LSAYVSDTIRTMKRDKFTRTCLVGNLSQELGGHDSALVDALKAAFAGWQQRVATCLDE
                     AQARGDISETADTHELAALFWMGWEGALMQARLFKRADPIQSFFKGYMKVVRS"
     gene            826..>1758
                     /locus_tag="VIC30_12170"
     CDS             826..>1758
                     /locus_tag="VIC30_12170"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEY7805171.1"
                     /translation="MNIVTSLLTRARSHPALAAVTSIDGTLTFAQLARNAHALAAALR
                     SQAKLEVGDRVVLFMENRGAYFEALMACWIAGVVPVPVNAKLHPRELGVIIEDSGARL
                     VFTSEVLVDSVTQLLADMPAAPQLVSVQSGTYRDWLALDVPGSIAVHNSAPNDLAWLF
                     YTSGTTGAPKGAMLTHRNLMMMVLQYFADVDAIRPGETMLHAAPLSHASGLYALPHLL
                     AGGHQVVQSGFDADAVLEALQQYQDVTLFGAPTMLTRLLTASVGVPNARGHLKMASYG
                     GAPMYLNDLLAVMDVFGTDLFAIYGQGESPMTITG"
BASE COUNT          408 a          432 c          506 g          412 t
ORIGIN      
        1 taatctaaat tcatgatcaa tgcactaatt tccggcaagc acaaaatcga tgatggggcg
       61 caagcgccca acggcaagcg tgcgttaaac cgggcgaagt tattgcgcac gggtgccgag
      121 ctacttagcg agcaaagcta tgcatgcacg ggtgtggacc acatcatcgt aaagaccggt
      181 ttaaccaagg gtactttcta tcactacttc aagagcaaag agcagtttgc tcttgaagta
      241 gttgatttgt atgccgacta tttcaatcaa aagcttgata cgtatttgtt aaatgactct
      301 cagccgccac ttgagcgatt gtcggcttat gtcagtgaca ccatcagaac gatgaagcgt
      361 gacaagttca cgcgaacctg cttggttggt aacttaagcc aagagctcgg cggtcatgac
      421 tctgccctag tcgatgcgct taaagctgcg tttgctggtt ggcagcagcg tgtggccact
      481 tgcctcgatg aggcgcaggc gcgaggtgat atcagtgaaa ctgccgatac gcatgaactc
      541 gcggcgctgt tctggatggg atgggagggg gctttgatgc aggcacggtt gtttaaacgc
      601 gctgacccga ttcaatcgtt ctttaagggc tatatgaagg tggtacggag ttaaatgaag
      661 tgggtagtca cttcggtggg ggggcgacgg ccgtttggcg tcgtttttgg cagtaaggta
      721 aaaagaagta aatgcgttga aatacttata aagctgaaag acagctaaac aaacagctaa
      781 acaaacagcg ccgcatcaca taacaaaaat agggggagac aggttgtgaa tatcgtcaca
      841 tccttgctga cacgggcgcg cagccatcca gcgctcgcgg cagtgacatc gatcgatggc
      901 acgctgacat ttgcgcaact cgcacgcaac gcgcatgcgc tagcagcggc actacgcagt
      961 caagccaagc tcgaggtcgg cgaccgcgtg gtgcttttca tggaaaaccg cggcgcctac
     1021 tttgaggcct taatggcgtg ctggattgcc ggcgtggtgc ccgtgcctgt gaatgccaaa
     1081 ctgcacccgc gcgaacttgg cgtcatcatc gaagattcag gtgccaggct tgtgttcacc
     1141 agtgaggtct tggtagacag cgtgactcaa ctgttggctg acatgcccgc tgcaccgcaa
     1201 ttggtcagcg tacaaagtgg tacttacagg gattggttgg cgctcgatgt gccgggtagc
     1261 attgctgtgc acaatagcgc acccaacgat ctggcttggt tgttttacac cagtggcacc
     1321 accggggcac ccaaaggtgc gatgctcaca caccgcaacc tcatgatgat ggtgttgcag
     1381 tattttgcgg atgtggacgc catcaggcca ggtgaaacca tgcttcacgc agcaccccta
     1441 tcacatgcca gtggtctgta tgcgttgccg cacttattgg ctggtggtca ccaagtggtc
     1501 cagtccggat tcgatgccga tgccgtgctc gaggcactgc agcagtatca ggatgtcacg
     1561 ctgtttggcg cacccaccat gttgacccga ttgttgactg cctcagttgg tgtgcctaac
     1621 gcccggggtc atttgaagat ggcttcttat ggtggtgcgc caatgtactt gaatgacttg
     1681 ctggccgtga tggacgtgtt tggcacagac ctgtttgcga tctatggtca aggcgagagc
     1741 cccatgacca tcactgga
//
LOCUS       DATBNL010000720         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_88723, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000720 DATBNL010000000
VERSION     DATBNL010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88723"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..560
                     /locus_tag="VIC30_12175"
     CDS             3..560
                     /locus_tag="VIC30_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEY7805172.1"
                     /translation="MAGRREMDWLGVMLLGCVTALGGGSMRDILLDNAPLTWVQHPHY
                     LLLTGGAALFTIAVARYMHKLRNVFLLLDAIGLVVFTVIGCNVAMGLDMPFIIVIASG
                     MITGCVGGVLRDLLCNTVPLLFRAELYATVSIVTGILYVGGEMLGMNHDLVMGIAMII
                     GLGLRLLAIRFNWGMPKFIYSGNMD"
     gene            complement(645..881)
                     /locus_tag="VIC30_12180"
     CDS             complement(645..881)
                     /locus_tag="VIC30_12180"
                     /inference="COORDINATES: protein motif:HMM:NF015827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HEY7805173.1"
                     /translation="MYRFGVIVVCSVLAGCTVSGPDPIMGLQLPNPASVYCIERGGTL
                     DIKESPQGDVTTCVLSDGTRVDEWEFYRQNHPQQ"
     gene            complement(956..1312)
                     /locus_tag="VIC30_12185"
     CDS             complement(956..1312)
                     /locus_tag="VIC30_12185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011809867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805174.1"
                     /translation="MLVMLQHVAHVRSGDKGNTSNISVFAYEPEFYPLLKSQLTAERF
                     KAHYQGAIKGDVLRYEVDNIEALNFVAHGALGGGVSRSLSLDNYGKALSAAILGFEIE
                     VPQALYSKLRGELQIK"
     gene            complement(1314..>1535)
                     /locus_tag="VIC30_12190"
     CDS             complement(1314..>1535)
                     /locus_tag="VIC30_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012840266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7805175.1"
                     /translation="PEPYELAVRVAARTATREQALKVGREVDGMAVSGVAHTGKRVPF
                     QERVREIIGVWSSLVPRDQVQASVSYWES"
BASE COUNT          323 a          437 c          392 g          383 t
ORIGIN      
        1 tggtggcggg caggcgtgag atggactggc tgggcgtcat gttgctaggc tgcgtcaccg
       61 cacttggtgg cggttcgatg cgcgatatct tgctagacaa cgcccccttg acctgggtgc
      121 aacacccgca ctacttgtta ctgactggcg gtgcagcgct ctttacgatt gctgttgccc
      181 gctatatgca caaactacgt aacgtctttc tgttactcga tgcaattggc ttggttgtct
      241 ttaccgtgat aggttgcaat gtggccatgg gcttagacat gccctttatc atcgtgatcg
      301 cttcgggcat gatcacggga tgcgtgggcg gggtgttgcg tgacctgttg tgtaacaccg
      361 tcccactgtt gtttcgggca gagctttacg ccaccgtctc aattgtcacg ggcatcctgt
      421 atgtcggtgg tgagatgcta ggcatgaatc acgatctcgt catgggcatc gccatgatca
      481 tcggcttggg cctgcgcctg ctcgccattc gctttaactg gggcatgccc aagttcatct
      541 acagcggcaa catggactag gtctggaggg caaaccggta ggttttccct gaggtttttg
      601 gtttcaggtt tggtttttcg ggtttggttt tctagttggg ctctctactg ctgcggatga
      661 ttctgccgat aaaactccca ctcatcaact ctcgtgccgt cggatagtac acaggtcgtg
      721 acgtctcctt gcgggctttc tttgatgtct agcgtgccac cgcgctcgat gcaatagacc
      781 gaggccggat tcggtagctg aagacccatg atcgggtccg gcccagatac cgtgcaacca
      841 gccaatacac tacaaaccac aatgacgcca aaccgataca tgctgttttg tccttaaacc
      901 tgagggttgc gctaacccgc tcacttacct gtcacttgct ctgtcacctg ccctgtcact
      961 taatctgcaa ctcgccgcgc aacttactat agagcgcctg cggcacctca atttcaaacc
     1021 caaggattgc agctgacaag gctttgccat agttgtcgag tgacaagcta cgagacacac
     1081 cgccgcccaa ggcaccgtgc gccacgaagt ttagcgcttc aatgttgtcc acctcataac
     1141 gcaacacatc gcccttgatc gccccttgat aatgcgcctt gaaacgttca gcagtcaatt
     1201 gggatttaag caaggggtaa aactcgggct cataggcaaa caccgaaata ttagacgtat
     1261 tgcccttgtc accagaacgc acgtgggcca catgctgcag catgaccaac atatcaactc
     1321 tcccaataag acactgaagc ttgaacctga tcgcgtggca cgagcgacga ccacacacca
     1381 atgatttccc tgacacgctc ttgaaacggc acgcgcttac cagtgtgtgc cacaccagat
     1441 acggccatgc cgtcaacctc gcgtccgacc tttaaggctt gttcacgcgt tgctgtgcgt
     1501 gctgcaaccc tgacagcaag ctcatacggc tcagg
//
LOCUS       DATBNL010000721         1957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148497, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000721 DATBNL010000000
VERSION     DATBNL010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148497"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..831
                     /locus_tag="VIC30_12195"
     CDS             85..831
                     /locus_tag="VIC30_12195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018423337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase"
                     /protein_id="HEY7805176.1"
                     /translation="MKIADIRANAYSMPFVSPSFPKGPYHFVNREFFIISYRTDEKIL
                     REMVPEPLTIEDPIVSYEFIRMPDSSGFGDYTESGQVISVVDEQGRKGGYTHMMYLDD
                     EAPIAGGRELWGFPKKLAMPKLEVASDTLVGTLDYGPIRVATGTMGFKYEPLDTAAEQ
                     KKLVETPNYLLKIIPHVDGTPRICELVRFHLQDVTVKGAWTGPAKLELFQHALAPVAD
                     LPVLEIVGAKHLVCDLTLGLGEVAHDYLKD"
     gene            961..>1957
                     /locus_tag="VIC30_12200"
     CDS             961..>1957
                     /locus_tag="VIC30_12200"
                     /inference="COORDINATES: protein motif:HMM:NF024215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family membrane protein"
                     /protein_id="HEY7805177.1"
                     /translation="MATRRLSIAEKFLYGYPLLSAIRKAIGILISLVCLHYLFGNVQP
                     AIFGAFGALCLSMMDLPGSPRQATFAFLIGSGLAIVSASLTAVTASDPYAVTIVLTLL
                     TFFFSMLVVYGRRGAMTSIACLILSLVVMYAAGLGLATSKLILAVASGLGIYMAINIG
                     LAFVMQRWEQAQCLSMALYATAKYLSLRARMLDPRANLDDAARAAVAAQGVMAELHQS
                     ARDMIFTGNNLDTNQPSPRHQELARVLYHTVSLHDMLLGSYEDYKLLRQGLGKHEILT
                     LSASILSTLAEQIDWVALAVANNKAARQHSSVTHKLTALELAITQFENDEAAQADP"
BASE COUNT          464 a          552 c          477 g          464 t
ORIGIN      
        1 cagtcacacc cacgtatcct aaggctttta tatttaacct gaagcgaaac caaagctttc
       61 ttattccaac caaaggagtc tcacttgaaa atcgctgata tccgagccaa tgcttactca
      121 atgccctttg tgagcccatc gttcccgaaa ggtccctacc atttcgtgaa ccgcgagttc
      181 ttcatcatct cttaccgaac cgatgaaaaa attctgcgcg agatggtccc ggagcctttg
      241 accatcgagg atccgattgt cagctacgaa ttcattcgca tgcctgactc atccggattt
      301 ggtgactaca ccgagtcagg ccaagtgatc tccgtggttg acgagcaagg ccgcaaaggc
      361 ggatacaccc acatgatgta tctcgatgac gaggcgccaa ttgcaggcgg gcgcgaactg
      421 tggggtttcc caaagaagct ggcaatgccc aagcttgaag tggcttcaga caccttggtt
      481 ggtacgctag actacggtcc catccgagtg gctacgggca ccatgggctt taaatatgag
      541 ccgctcgata cggccgctga acagaaaaaa ctggtagaaa cgcctaacta tctattgaag
      601 atcatccccc atgtggatgg cacaccgcgc atctgcgagc tcgtgcgctt tcatttgcaa
      661 gatgtcacgg tcaagggcgc atggacaggt ccagccaaac ttgaactctt tcagcacgcg
      721 ttggcgccgg tggctgactt gcccgtactg gaaatcgtgg gtgccaagca tttggtgtgc
      781 gacttgacac ttggcttggg cgaagtggct cacgactacc tgaaagactg atcagaataa
      841 aaccagtcga ctatcattcg gcatgtacga tgcagcgggt agcacagaca atgtgttacc
      901 cgctgttttt gtacctggca atattcgact aacacccact cacccattaa ccaacacacc
      961 atggccacca gacgcctgtc gatcgcagaa aagtttctat atggatatcc gttactgagt
     1021 gccatcagaa aggccatcgg tatcctgatt tcactggtgt gtttgcacta cctgtttggt
     1081 aacgtacaac ccgcgatttt tggggcgttt ggcgcgctct gcctttcaat gatggatctg
     1141 cctggatcgc ctcgccaggc cacatttgct tttctgatcg gttcaggcct cgccatcgta
     1201 tcggcgtcac ttaccgccgt gacagcctca gatccctatg cagtaaccat cgtgttgaca
     1261 ctgctgacct tctttttttc aatgctcgtt gtctacggta gacgcggcgc catgacaagc
     1321 attgcttgcc tgatcttgag tttggtagtg atgtacgccg caggccttgg cctcgcgacc
     1381 agcaagttga tattggctgt tgcgtccggg ctaggcattt acatggctat caacatcggc
     1441 ctagctttcg tgatgcaacg ctgggaacag gctcagtgcc tgtcaatggc actgtatgcc
     1501 accgcgaaat acttgtcgct tcgcgcgcgc atgcttgacc caagagccaa cctcgatgat
     1561 gctgcacgcg cagcggttgc cgcacaaggg gtcatggccg agctccacca atccgctcgc
     1621 gacatgatat ttaccggcaa caacctagat acaaatcagc cgtcaccgcg ccaccaggaa
     1681 ttagcccgtg tgctgtatca caccgttagc ttgcacgaca tgctgttagg ttcttacgag
     1741 gattacaaac tgttacgcca aggtctcggt aagcatgaga tcctgacctt atccgcgagc
     1801 attctgtcga cgctcgccga acaaatcgat tgggttgcct tggcggttgc caacaacaaa
     1861 gcggcacgcc aacacagcag cgtcacacat aaactcaccg cactcgaact tgccatcacc
     1921 caatttgaaa atgacgaagc tgcacaagca gacccag
//
LOCUS       DATBNL010000722         1840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_168478, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000722 DATBNL010000000
VERSION     DATBNL010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168478"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="VIC30_12205"
     CDS             <1..808
                     /locus_tag="VIC30_12205"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018005975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY7805178.1"
                     /translation="IRVGSGGIMLPNHAPLVIAEQFGTLASLYPDRIDLGVGRAPGTD
                     QLTARALRRDLQDTGEGFPQDVIELQHYLSLEAHEHAVKAVPGMGTEVPIWILGSSLY
                     GAQLAAHLGLPYAFASHFAPAELMNALTVYRQTFKPSKHLAKPYTMVLVNVVAADTDD
                     QARYLYTSVQQHFVRMRRNTRGMLPPPLDDIDTFWNETERHFATQMLACSVVGSPDRV
                     TEGLANVLQQTQAQELMFAGQIHDHQARLHSFTIAAQAMQSIKATAAVAA"
     gene            complement(926..1837)
                     /locus_tag="VIC30_12210"
                     /pseudo
     CDS             complement(926..1837)
                     /locus_tag="VIC30_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006220936.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
BASE COUNT          448 a          539 c          453 g          400 t
ORIGIN      
        1 catccgggtt ggttccggtg gcatcatgct gccaaaccat gccccattgg tgattgccga
       61 acagttcggc accttggcca gcctctaccc ggatcgcatt gacttgggcg ttggtcgcgc
      121 gccgggcact gaccaattaa ctgctcgcgc acttcgacga gacttacagg acaccggcga
      181 aggtttcccg caagatgtta ttgagctaca gcattatttg agcctagagg cccatgagca
      241 tgccgtcaaa gctgtaccag ggatgggaac ggaagtgccc atctggatct tgggctcaag
      301 cctttacggc gcgcaactag ccgcccactt gggcttgccg tacgcatttg catcgcactt
      361 tgcgccggct gagttaatga atgctctgac cgtttatcgc caaaccttca agccatccaa
      421 gcatctggct aaaccttaca ccatggtctt ggtcaatgtg gtggcggctg acaccgatga
      481 ccaagctcga tacctttaca catcggtgca gcaacacttt gtcaggatgc gccgcaatac
      541 ccgcggcatg cttccgcctc cattagacga catcgatacc ttctggaacg agaccgagcg
      601 acactttgcc acccaaatgc tcgcctgctc agtcgtcggt tcaccagatc gcgttaccga
      661 gggtctagcc aacgtgttgc aacaaacaca agcccaagaa ttgatgtttg ccggtcaaat
      721 ccatgaccat caggctcgcc tgcactcttt caccattgct gcgcaagcca tgcaaagcat
      781 taaggcaaca gccgctgttg cagcgtaata gccgagctca gcagacaacc attggcggca
      841 acttggcacc aactgacaac aactgacaac aatcgaccga gcgcaataac ccggccagcc
      901 tttgcttcag aacgccgcag tcgttttatt tcgagccgta tatgtagtca cgccgccacg
      961 gataggctaa atcggtaggg tgatcaagct catcagcgcg cccagactgt ggcaaatgtg
     1021 cgccaagcac ctgatgcaaa gcaatccagc cattctcaaa cccggcggca caaccagcca
     1081 gatacaaccg ataggctctg agcgcacgtt gcccacgctc accggagagg atttttttgg
     1141 cttggtcgag ctttgcttca agcccgtcgc tccacgccca taatgtacgg gcatagtgag
     1201 ggcgcagatt ctcaacatcc agtgtctcta agccaccatt ggccatgtgc gtcatgacgt
     1261 ggccgatgtg cgttaactcg ccgcctggga aaatatattt ctcaatgaag tcacccatgc
     1321 catggccaag ctgagcgttg tccacgccac cggcggtaat accgtgattc atcaccaaac
     1381 cacctggtgc cagcaaatga cgcaaacggg tgaaatacgt gtcgagctgt gcgcgaccga
     1441 catgctcgaa catgcccact gaggcgatct tatcaaaagg tttatctgta tctagctttc
     1501 tgtagtcaag caagtgcatg cgcacacgcc ctgacaagcc tttttgctca atcagttggt
     1561 taacgtaggc gtgctgattc ttagacaatg tgattccggt ggcatctacg ccatagtgct
     1621 cagcagccca catcaacaga ccaccccagc cagcaccaat atcgacaaac cgctcaccgg
     1681 cttgcaggcg cagtttgcgg caaatgtgtt caagcttggc ctcttgtgct tgggccaaat
     1741 tcatgtcagg ggtggcgaaa tacgcgcagg aatagaccct taagggatca agccacagac
     1801 cgtagaaatc atcggaaaga tcgtaatgaa attcgattta
//
LOCUS       DATBNL010000723         1568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_68660, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000723 DATBNL010000000
VERSION     DATBNL010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68660"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VIC30_12215"
     CDS             <1..310
                     /locus_tag="VIC30_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEY7805179.1"
                     /translation="FGMMADKDVDTVIAHLAKRIDRWFCVDLPGKRAMTGEALAERVR
                     SVAAATRSKEDGPFEVEVCGDVAQANQAVRQIVGPDDRIVVFGSFLTVAGALQAIGRH
                     "
     gene            369..1244
                     /locus_tag="VIC30_12220"
     CDS             369..1244
                     /locus_tag="VIC30_12220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003811818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEY7805180.1"
                     /translation="MGLFSRKEAKSSRHATQRPRPSVSSEAQASSMRVRARRRLAGAV
                     ALVLAAVIVLPMLLDGDPRPVPAGIEIVVPERNAPFNPDLRPAPAVAAATSAAGSSDS
                     SGIVDGTEASDVTDAANASAADGQTSSSTANEPANAASANAETSAAGNKTTQESAATD
                     QSQTATDGPAPVAKPADDPKGQTKSTSQAKSEGSGDSTAVAMAILEGRTPAAASSNYV
                     LQIASYNSSPDAQSRVEKLKSQGVSNAFVQSATVNDKPTYRLRVGPFDSRAAAQAAQA
                     RLRTLGYDNGFITTK"
     gene            1241..>1568
                     /locus_tag="VIC30_12225"
     CDS             1241..>1568
                     /locus_tag="VIC30_12225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEY7805181.1"
                     /translation="MTGFDFALLGIVGASTLLGVFRGLIKELLSLVAFGLAFLAAVWW
                     GPSLAGLTILNWVGHEYLRLGISYAAILAATLLAVGLVNMAMAAMIKSTGLSPADRGL
                     GAMFGLI"
BASE COUNT          323 a          409 c          469 g          367 t
ORIGIN      
        1 ttttgggatg atggccgaca aagatgttga tacggtcatt gcacacttgg ctaaacgcat
       61 tgatcgctgg ttctgcgttg atctgccggg taaacgcgcc atgacaggtg aagcgcttgc
      121 tgaacgcgtt cgatcagtgg cggccgcgac tcgatccaag gaagatggcc cattcgaggt
      181 tgaggtctgt ggcgatgttg cacaagccaa ccaagcggtg cgccagattg tcggcccgga
      241 tgatagaatc gtggtgttcg ggtcattttt gacggtggcc ggtgcactgc aggcaatcgg
      301 caggcactag gtactgcgtc tccaggagct gagttctggc ggcgcccctt cctgtacaag
      361 gttaggtcat gggtttgttt agcagaaaag aagccaagtc ctcgcgtcac gccacgcaac
      421 gtccccgtcc atccgtatcg agcgaagcac aggcttcaag tatgcgtgtt cgggcacgcc
      481 ggcgactagc gggtgccgtc gcgcttgtct tggccgcagt cattgtgttg cccatgttgc
      541 ttgacggtga tccgcgtcca gtgccagccg gtattgagat tgtggtgcct gagcgcaatg
      601 ccccattcaa tccagactta cgcccagcgc cggctgtggc tgctgcgaca agcgctgctg
      661 gcagctctga cagttcaggc atcgttgatg gcactgaggc ttcagatgtc accgatgccg
      721 ccaacgccag tgcagctgac ggtcagacgt cgtcaagtac agcgaatgaa ccggcaaatg
      781 cagccagtgc aaatgccgaa acaagcgctg ccggtaacaa gacgacacaa gagtcggcgg
      841 ccactgacca gtcgcaaacc gctaccgatg gccctgcgcc agtggctaag cctgccgatg
      901 accctaaagg tcaaactaag tcgacttcgc aggctaaatc tgaggggtct ggtgacagca
      961 ccgcggttgc catggccatt cttgagggac gaacgcccgc tgctgcgagt agcaattacg
     1021 tcttacagat cgcttcctac aatagttcac cagatgccca gagccgtgtc gagaagctaa
     1081 agtcacaggg ggttagtaac gcgttcgtac aaagcgccac cgtcaatgac aaaccaacct
     1141 atcgattgcg tgtaggccca tttgattcgc gtgctgctgc tcaagccgct caggcaagac
     1201 ttagaaccct gggttatgac aacggtttca tcactaccaa gtgaccggtt ttgattttgc
     1261 gttgctcggc attgttgggg catcgaccct tttaggggtg tttcgtggcc tgattaaaga
     1321 actgttgtcg ctcgtcgcat ttggattggc atttctggct gctgtctggt ggggtccgag
     1381 cctggcgggt ttgacgattt tgaattgggt gggtcacgag tacttgcgac ttggaatctc
     1441 ttatgcagcg attttagcag ccacattgtt ggctgttggg ctggtaaaca tggccatggc
     1501 tgccatgatc aaaagcacgg ggttgtcccc ggccgatcga ggccttggtg cgatgtttgg
     1561 attgattc
//
LOCUS       DATBNL010000724         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_78301, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000724 DATBNL010000000
VERSION     DATBNL010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78301"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VIC30_12230"
     CDS             complement(<1..393)
                     /locus_tag="VIC30_12230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEY7805182.1"
                     /translation="MAGEKNVETTGTLGWIDQRFPLTKMVKEHLSEYYAPKNFNFWYF
                     FGSLAMLVLVIQIVTGIFLVMHYKPDAEMAFDSVEYIMREVPGGWFIRYMHSTGASMF
                     FVVVYLHMTRALIYGSYRKPRELVWIFGV"
     gene            complement(452..1102)
                     /gene="petA"
                     /locus_tag="VIC30_12235"
     CDS             complement(452..1102)
                     /gene="petA"
                     /locus_tag="VIC30_12235"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEY7805183.1"
                     /translation="MSQDSTVNRDDDAEGSAPLELPSDPQRRFWIGATCLAGGAAGAA
                     VAVPFVGSFAPSEKARAAGAPVEVDLTAIPPGQMRTYEWRGKPVWVIHRTPEMLEGLS
                     KVNADLADPDSTRPGYTPPYAQNEYRSRKPDFWVGVAICTHLGCSPTPRFEPGAQPSL
                     PDDWQGGSICPCHGSWFDMAGRVYKNKPAPDNLEVPPYQYLTDSRIVIGVDEDNPA"
     gene            1221..1685
                     /gene="mscL"
                     /locus_tag="VIC30_12240"
     CDS             1221..1685
                     /gene="mscL"
                     /locus_tag="VIC30_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEY7805184.1"
                     /translation="MASVKGIMSEFRAFAVKGNVVDLAVGIIIGAAFSKIVNSLVTDI
                     VMPVVNVILGGSADFSNKFIVLSKPADYAGPQTYADLSEAGAVLFAWGNFLTILLNFI
                     LLAFVIFWMVKAVTTARTRFEQQAKEEAPAAPPQDVVLLTEIRDLLKKDKVD"
     gene            complement(1710..>2334)
                     /locus_tag="VIC30_12245"
     CDS             complement(1710..>2334)
                     /locus_tag="VIC30_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013390937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEY7805185.1"
                     /translation="VEKAIELNADGLLVHHGWFWRGEDLTVRGTRKQRLAKTLAHDLN
                     LFAYHLPLDAHPVYGNNAQLAKVIGLTPDLDAQGNPVTGGGKDLVWFGQVQESISLAA
                     LQGRIASRLNREPVVVGKPEKICNKIAWCTGGAQGMFETAIEAGVDAYITGEISEPNA
                     HLARESGVAFISAGHHATERYGVKALGEAVAAKFEIEVLFFDINNPA"
BASE COUNT          565 a          620 c          581 g          568 t
ORIGIN      
        1 cacaccaaaa atccagacca gctctcgcgg cttgcggtac gagccgtaaa tcagcgcgcg
       61 cgtcatgtgc agatagacaa caacgaagaa catcgatgcg cctgtggagt gcatgtagcg
      121 gataaaccaa ccaccgggca cctcacgcat gatgtattcg acggagtcaa acgccatttc
      181 tgcatctggt ttgtaatgca taaccagaaa aatcccggtc acgatctgta tgacaagtac
      241 caacatggcc aacgagccga agaagtacca gaagttgaag tttttgggtg cgtagtactc
      301 tgacaagtgt tctttcacca tctttgtcag agggaatcgt tggtcgatcc accctagcgt
      361 acccgtagtt tcgacgttct tttcgccagc catggaatgg ctcctctcag tctttcaatt
      421 cagtcaaaag tgtgtacagc aatccgcaac cttaagcggg attgtcctca tcaaccccaa
      481 tcacgatccg agaatcggtg aggtattggt aaggtggcac ttccagattg tcaggtgcag
      541 gtttgttttt ataaacccgg cccgccatat caaaccatga cccatggcaa gggcagatgc
      601 tgccgccttg ccaatcatcg ggcagactcg gttgtgcgcc tggctcaaaa cgtggcgtcg
      661 gcgagcaacc caaatgggtg caaatcgcca caccaaccca aaagtcgggt ttgcgcgacc
      721 gatattcgtt ttgtgcatag ggtggggtgt agccggggcg ggtcgaatcg gggtcagcta
      781 gatccgcgtt aactttagat aaaccctcaa gcatttccgg cgtacgatgg atgacccaga
      841 cgggtttgcc acgccattca taagtgcgca tctgtccagg cggaatggcc gtcaggtcga
      901 cctcaaccgg tgcacctgca gctctggctt tctctgatgg cgcaaaactt cccacaaagg
      961 gtacagccac tgcagcgcct gcagcaccgc cggctaaaca ggtagcccca atccagaatc
     1021 gtctttgcgg atcgcttggc agttcaagtg gtgcggaacc ttcagcgtcg tcgtctcggt
     1081 taaccgttga atcctgactc atcacataat ccttggtcgt gatctcccgc attcgggatt
     1141 tgatagatac aaataactaa tcgtccaata ttataacgcc gtgttgaaca accaattgac
     1201 gatcgtcaag gagaacaaaa atggcttcgg tcaaaggcat catgtcagag tttcgtgcat
     1261 tcgctgtcaa aggcaatgtg gttgatcttg cagtcggcat catcattggt gcggcgtttt
     1321 ctaaaatcgt gaattcactg gtcacagaca ttgtgatgcc agtggtcaac gtaattttag
     1381 gtgggtcagc tgatttctcc aataaattca ttgtgttatc aaagcccgct gactacgctg
     1441 gtccgcaaac ttacgccgat ttgagcgagg ccggcgcggt cttatttgcg tggggtaatt
     1501 tcctgacaat tctcttgaat ttcatcttgc tcgcgtttgt gatcttttgg atggttaaag
     1561 ccgtgaccac ggcgcgtaca cgatttgaac aacaagcaaa agaagaggcg ccagcagcac
     1621 ccccacagga cgtggttctt ttgaccgaga tcagggattt acttaaaaaa gataaggttg
     1681 attaaggctt aaccaagctt taatttggct caagccgggt tgttgatgtc aaaaaacaac
     1741 acttcgatct caaatttcgc cgccactgct tcgccgagcg ctttaacacc gtagcgctcg
     1801 gttgcgtggt gtccggcact gataaatgcc acaccacttt cccgcgccaa atgcgcgtta
     1861 ggttcggaaa tctcgccagt gatgtaagca tcgacgcctg cctcgatggc agtctcaaac
     1921 atcccctgtg cgccgccagt gcaccaggcg atcttgttac agattttttc tggcttaccc
     1981 acaaccacgg gctcgcggtt gagtcgacta gcgatccgtc cttgcaatgc cgcgagcgat
     2041 atcgattctt gaacttgccc aaaccaaacg aggtccttgc ctccaccagt gactggattg
     2101 ccctgcgcat cgaggtccgg cgtcaagcca atcactttgg ccaattgtgc gttattgccg
     2161 tatacgggat gtgcgtctag cggtaggtga tacgcaaaca ggttcagatc gtgagccaat
     2221 gttttagcca atctctgctt gcgggttccg cgaaccgtca gatcctcccc acgccaaaac
     2281 cagccgtgat gaacgagtaa gccatcggca ttaagctcaa tggctttctc aaca
//
LOCUS       DATBNL010000725         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_197500, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000725 DATBNL010000000
VERSION     DATBNL010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197500"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VIC30_12250"
     CDS             <1..878
                     /locus_tag="VIC30_12250"
                     /inference="COORDINATES: protein motif:HMM:NF016668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HEY7805186.1"
                     /translation="SFNVAVTEACRTEADRSWKSVAICADDFGVDPQVDAAIVELAAI
                     GRLNATSVLIDAGISEASVASLAELDIDVGLHLNFTDALGDLTDSAVMPLKSLIWRAH
                     ARLLSRDWVRQTIERQVSRFEARFGRCPDYVDGHLHVHQLPVIREALLEVLGTRELPE
                     GFWVRDTRAGALAGSTGSERFKAWVVGHLGMANLADKAAHQRIGHNQGFFGVYDFTGA
                     HRPFMQMMQDWLAGATSGALVMTHPAAAQLNGDPIGKARVQEYVALGGPAFGALLQDS
                     GVRLKRLSQTLSSLP"
     gene            complement(854..1582)
                     /locus_tag="VIC30_12255"
     CDS             complement(854..1582)
                     /locus_tag="VIC30_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEY7805187.1"
                     /translation="MTQSGNSQTPQASEPKAQATAVAATDALRPSLQPPPGAKKVLLH
                     SCCAPCSGEVMEAMLAAGIDYDIFFYNPNIHPVKEYEIRKQENIRFAERHGIGFIDAD
                     YDVDNWFERIRGLENEPERGERCTKCFDMRFERTALYAAEHGYDTITSSLGISRWKDM
                     NQINGCGERAAARYDNLSYWTYNWRKHGGSQRMIEISKRESFYQQEYCGCVYSLRDTN
                     RHRRSQGRDRIKIGVKFYGKEDNV"
     gene            1730..>2245
                     /locus_tag="VIC30_12260"
     CDS             1730..>2245
                     /locus_tag="VIC30_12260"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7805188.1"
                     /translation="MMERRAFLAGAAALAAAGWGPPAIAKSDAKARVVIAGAGAAGLS
                     IAARLARQMPNATITIFDKRRDHYFQPGWTLVGAGWWKPSQTVESTRSYIPSGVNWVE
                     QDIFEFNPDGNQVTDASGQKHNYDWLFVATGLSLDYDQIPGMSVDLIGSKGIASVYAG
                     PQAAAASAQVID"
BASE COUNT          457 a          569 c          653 g          566 t
ORIGIN      
        1 attcgtttaa tgtagccgta accgaagcgt gcagaacaga agcagacaga tcgtggaagt
       61 ctgtggcgat ttgtgctgac gatttcggcg tagaccccca agtagacgcc gctattgtag
      121 agctcgcagc gattgggcgc ctaaatgcaa cgagcgtgct cattgacgcc ggtattagcg
      181 aggcgtccgt ggctagcctg gcagagctcg atatcgatgt gggtttgcac ttgaatttca
      241 cggatgcact cggtgatttg acggactcag cggtgatgcc acttaaatcc ttgatctggc
      301 gtgcacatgc acggctgttg tcgcgagact gggtgcgtca aacgattgag cgtcaggttt
      361 cgcggtttga agcgcgcttt ggtcgttgtc ctgactacgt tgatggccat ttgcacgtcc
      421 accaattgcc cgtgattcgc gaggcactgc ttgaggtgtt aggtacacgt gagttaccag
      481 aaggtttttg ggtacgtgat acgcgtgcgg gtgctttggc tggatcgact ggctctgagc
      541 gttttaaggc ctgggtagtg ggccatctgg gcatggcgaa cttggccgac aaagctgcgc
      601 atcagcgcat cggacacaat caggggtttt ttggggtgta tgacttcacc ggtgcgcatc
      661 gcccattcat gcagatgatg caagactggt tggctggcgc cacctcaggt gcgctggtga
      721 tgacgcatcc ggctgctgcg cagttaaacg gtgacccgat tggtaaagca cgtgtgcaag
      781 agtacgttgc actaggcggc ccagcatttg gtgccctact gcaagacagt ggtgttcgtc
      841 tgaagcgcct gtctcagacg ttgtcttctt tgccgtagaa cttcacacca attttgatgc
      901 ggtcacgtcc ttgcgagcgg cggtgacggt tggtgtcgcg caatgaatac acgcatccac
      961 agtactcttg ctggtagaac gactcgcgtt tactgatttc gatcatgcgt tgcgagccac
     1021 cgtgcttacg ccagttatac gtccaatacg acaggttgtc gtagcgcgcg gcagcgcgct
     1081 caccacagcc gttgatttgg ttcatgtctt tccagcgcga gatacctagc gaactggtga
     1141 tggtgtcgta accatgttct gcggcataca aggcggtgcg ttcgaatcgc atgtcaaagc
     1201 acttggtgca gcgctcacca cgttcgggtt cgttttctag gccgcggatg cgttcaaacc
     1261 agttatcaac atcgtaatcg gcatcgataa agccaatccc gtggcgctcg gcaaaccgga
     1321 tgttttcctg cttgcggatt tcgtattcct tgaccgggtg aatgttcggg ttatagaaaa
     1381 aaatgtcgta atcaatgcct gcggccagca tggcttccat gacttcgccc gagcagggcg
     1441 cgcaacaaga gtgcaacaac accttcttgg cacctggggg cggttgcagg cttgggcgca
     1501 gtgcatcggt tgctgccacg gccgttgctt gggccttggg ctcactcgct tgcggcgtct
     1561 gagagtttcc ggattgcgtc atgtgttgat ttaagtcaat tgatcgtagt caagtttcta
     1621 ttttaatgcc cctaaggaca agtgcttaga caaattttag acaaatctta gtcaaaccca
     1681 tatttgtcag ggctcttgcc atgttttcat gtttttggtg cggaggcaaa tgatggaacg
     1741 acgagcattt ttagcaggcg cagccgcttt ggctgctgcc gggtgggggc caccggccat
     1801 cgcgaaatca gacgccaagg cacgcgtggt cattgccggt gcaggtgcgg ctggcttatc
     1861 gattgccgcc cgcttagcgc gtcagatgcc caacgccacc atcaccatct ttgacaaacg
     1921 ccgtgatcac tactttcagc ctggctggac gctcgttggc gctggttggt ggaaaccgtc
     1981 acaaacggtt gagtcaaccc gctcgtacat tccttcgggt gtgaactggg tcgaacaaga
     2041 catcttcgaa ttcaaccccg atggcaatca agtcaccgac gccagtggac agaagcacaa
     2101 ctacgactgg ttgtttgtcg ctacagggtt gtcgttggac tatgatcaaa tcccaggcat
     2161 gagtgttgat ctcatcggtt caaaaggcat tgccagtgtg tatgccggtc cccaagccgc
     2221 tgcagcctcg gcacaggtca ttgat
//
LOCUS       DATBNL010000726         5611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_128385, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000726 DATBNL010000000
VERSION     DATBNL010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5611
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128385"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..953
                     /locus_tag="VIC30_12265"
     CDS             <1..953
                     /locus_tag="VIC30_12265"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY7805189.1"
                     /translation="IFLLGLLVMTGYLLTGLFTVTDNAFVVRVQTPVSVKVPGTVLDV
                     YVQNGQRVEEGEAVLKLDDKAYSLALANAQAQVDSARAGIDVLRKQVELAGFEVAAAQ
                     DNLALLQYELAQKSSAKVRSAVPQIEVKQLEFEVRAQENQVLALKASQERDRLAIKQA
                     EMQLIGLRALRDEALLALEDTVVRAKTSGVVENQFMARGQEVVPGQTLFTVAPDGKIY
                     VQANFNETDLAGVKPGDKVSIYPRTYLWDKSFEGVVVSQPFGVDRQITPPLMAEQVVL
                     SQNRWLQLPQRLPLLIEITNPDQNTYPLQSGMSAYVHVHD"
     gene            934..1836
                     /locus_tag="VIC30_12270"
     CDS             934..1836
                     /locus_tag="VIC30_12270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805190.1"
                     /translation="MSTCTTERWIDRVDPYGYARQAGLKVSYVAIIFFLVNAFWKAPT
                     LAVLTMCVAGAGIALIEMPSINTSKKKDVSYIVFTLLTITTVSIFRFFSYFTVLELVA
                     IIGWSYVLYRLIAKDTEKAQVVAIAILIGFVSLEAPGATDFWQWVNQTAFYVQFAVIA
                     FVAHKLFPNRYMRIVHNIMRQIWLLQQRQLTEPDKTSFTAMGTDFLKHLGTLEQVQPL
                     LAPQTREHLPALIQALWQYQHTIEAAARHADREQIKQILITHEVLLKQIQAPTKATSP
                     IDDDQNLVAANTLSQAWSHLCQRA"
     gene            1821..2633
                     /locus_tag="VIC30_12275"
     CDS             1821..2633
                     /locus_tag="VIC30_12275"
                     /inference="COORDINATES: protein motif:HMM:NF024905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEY7805191.1"
                     /translation="MPARLMHRRTLQVCLLLTVALLFSRVPQWEHGSWILISVGAIIG
                     PFSPLLTFRKSMLRALGTTAGLLLSAMLIATLSHLPWSIPILGVILAYGIAFTSQQDY
                     RYFIMIVTVAIALNFADMYVPFTPFEPWSFFSSRAMGVFIGIAVYVTLEWFVFGKQEF
                     IRWAKANNDEFADKLATIVTKLNNLDASSPSLNQPLLAEISLAQAAHAESLSNMASDL
                     DQSVFGQAKRLQRIAQRLQMSVYRALCGSTRSDLNITMRKRRIQALLSQQCA"
     gene            complement(2666..3973)
                     /locus_tag="VIC30_12280"
     CDS             complement(2666..3973)
                     /locus_tag="VIC30_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009520599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY7805192.1"
                     /translation="MMMEWYQVGLGLMGLLMLFIIIGLPIPFAMAAAALPFLLNIQGL
                     STSLVSTELKLWGVWIDYILLSVPLFVFLGELIGRSRIGPDLYRFMHGGIPVKGSAAF
                     GSIGACAGFGAVCGSSMVGSLTIGGVALPEMIKLGYDRRLSSGVLAAGGTLSVLLPPS
                     LILLFYGIVTDQSIGRLFIAGIIPGLLLASLFVLVVVIWARLHPDHIPAAEKGRRWSA
                     REIAVTLGPVLIIGAIITVSIYAGIATPTEAAAVAALATLVLAFWVGGLTKVAFVDSL
                     MATMRTMGYLGLLLSAGVLFGFVMNYYQIPQQFTSFFLSFDLSPYFVLLLVILFYIVL
                     GMFLEPVSMTFITLPTIYPLIAASGFDLIWFGIIYTITMEIAVLTPPVGLNLFVIQAI
                     GRDHVTIGDVIKGSIPFILAMVVLLLALIFYPALATWLPDIMN"
     gene            complement(3980..4489)
                     /locus_tag="VIC30_12285"
     CDS             complement(3980..4489)
                     /locus_tag="VIC30_12285"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY7805193.1"
                     /translation="MLPRLIHVTERLTRWAAGVGGIIILVQMTWISYGVFKRYVLGDP
                     DAVVTEATALLLFPVAFLGLAYALTVNAYPTVSYVVDSLQGRPRRLLVAFNLLIMVLI
                     GAFFSYAGIDATIKSYQSGAASEILLWPRVYFWLPGAVALVLFTWYAVLRLLLVLTEQ
                     PDCAQQKRS"
     gene            complement(4563..5564)
                     /gene="dctP"
                     /locus_tag="VIC30_12290"
     CDS             complement(4563..5564)
                     /gene="dctP"
                     /locus_tag="VIC30_12290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009520597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY7805194.1"
                     /translation="MKSHLIPKYALSAVVCAATFAMASGVEAQTTLRLSTYVNETDIR
                     YEGFQKFAQLAEEKTSGRVKVQIFPSATLHGWSEGVDAVLGGVSDISWIPADKRLACY
                     RVTSLYPALVDLDKQIEMDAKFADLMRPEAEKVGLVPLINSNYSYDQEWWFKGPIEDI
                     AKLDGKLVRSIGPLVSMMIETWGGKPVFIAPKEVYQSAERGVVDGINMGVATYSSWKL
                     WDVMPYMVNGTMFYGNIIYMINKKKFDSLSADDQKALMAAASESEVWLKPRYENWVNE
                     QVGNAVMKGGGAAVSLSMDKRASLVGDIQQKWNPTVKTDCGDALSGQVLNLFNEYKE"
BASE COUNT         1546 a         1558 c         1295 g         1212 t
ORIGIN      
        1 tgattttttt acttggcctg ttggtcatga caggctatct gttaaccggc ttatttacag
       61 ttactgacaa tgcatttgtc gtgcgcgtgc aaaccccagt atcggtcaag gtgccgggga
      121 cggttcttga tgtctatgta caaaacggtc aacgagtaga agaaggagaa gcagtactaa
      181 aactcgatga caaagcctat tcattggcac tggcgaacgc ccaagcacag gtcgactcag
      241 cgcgggcagg tattgatgtg ttgcgcaaac aagttgagct tgcaggtttt gaggtggcgg
      301 ccgcccaaga caacctagcg ttgttgcagt atgaactcgc acaaaaaagt agcgcaaaag
      361 tcaggtccgc agtgccgcaa attgaagtca agcaactgga gtttgaagtc cgagcacaag
      421 aaaaccaagt gctcgcactc aaagccagtc aagagcgtga ccgcttggcc atcaaacaag
      481 cagaaatgca attaatcggc ctgcgcgcct tgcgtgacga agcgctttta gcactcgaag
      541 acacggtagt gcgcgcaaaa accagtggcg ttgtagaaaa tcagttcatg gctcgcggtc
      601 aagaagtggt gccaggacag acgctcttta cagtggctcc cgatggcaag atctacgtcc
      661 aggccaactt caatgaaacc gatctggccg gcgtcaaacc aggcgacaaa gtcagcatct
      721 acccgcgcac ctacctctgg gacaaatcgt ttgaaggcgt ggttgtgagc cagccgtttg
      781 gggtcgatcg ccagatcacc ccgcccttga tggccgagca agtggtgctc tcgcaaaacc
      841 gctggctaca gttaccccag cgtctgccac tgctcatcga gatcaccaac cccgaccaaa
      901 acacctatcc cctgcaatcg ggtatgagtg cctatgtcca cgtgcacgac tgagcgctgg
      961 atcgatcgtg ttgatccata tgggtacgca cggcaagcgg gcctgaaggt cagttacgtc
     1021 gccatcatct tttttttagt caacgcattt tggaaagccc cgacactggc tgtcctaacc
     1081 atgtgcgtgg caggtgccgg tatcgcacta attgagatgc catcgattaa cacctcaaaa
     1141 aagaaagatg tcagctacat cgtgtttacg ttactgacca tcaccacggt atccatcttc
     1201 cgattcttta gttacttcac cgtactggaa ctcgtggcaa tcatcggttg gtcatacgtg
     1261 ctctatcgac tcatcgccaa ggacacagag aaagcgcaag tcgtggccat cgccatcctg
     1321 atcggctttg tgtcgctaga ggcaccggga gccactgact tctggcaatg ggtcaatcaa
     1381 actgcgtttt atgttcaatt cgccgtgatc gcgtttgtgg cgcacaaact gtttcccaat
     1441 cgatacatgc ggattgtgca caacatcatg cggcaaatct ggttgctgca gcaaaggcaa
     1501 ctaactgagc ccgacaagac ttcgttcact gcgatgggca ctgatttctt aaaacacctc
     1561 ggtactctcg aacaggttca accattgctt gcaccccaaa cccgtgagca tctgccagcc
     1621 ttgattcaag cgctctggca ataccagcac accatcgaag cggctgcgcg ccacgccgat
     1681 cgggagcaaa tcaagcaaat cctgatcacc catgaagtcc tgctcaaaca aatacaggcc
     1741 ccaaccaaag caacctcacc tatcgatgat gaccaaaact tggtcgcagc taacactctg
     1801 agtcaagcat ggagccacct atgccagcgc gcttgatgca ccgacgcacc cttcaagtct
     1861 gtttgctgct aacggttgcc ctgctcttta gccgtgtgcc ccaatgggag catggctcat
     1921 ggatcttgat atcggtgggt gccatcattg gacccttttc cccgttgctg acatttcgca
     1981 agtctatgct gcgcgccctt ggaacaaccg caggcctgtt gctatcagcc atgttgattg
     2041 ccacgctcag ccatctaccc tggagcatcc cgattctggg tgtcatactg gcttatggca
     2101 ttgcatttac ctcacagcaa gactatcgct acttcatcat gattgtcacg gttgccatcg
     2161 ccctgaattt cgcggatatg tatgtgccat tcacgccgtt tgaaccctgg tcattttttt
     2221 cttcgcgcgc catgggtgtg ttcataggca ttgcggtgta tgtaaccctt gaatggtttg
     2281 tgttcggcaa acaagagttc attcgttggg ccaaggccaa taacgacgaa ttcgctgaca
     2341 aactcgcaac catcgtcaca aaacttaata acctagacgc atctagccca agtctgaatc
     2401 aacccttgtt ggcagaaata tctctagcgc aggctgcaca tgccgagtct ttatctaata
     2461 tggcctcaga cctcgaccaa tcggtatttg gccaggcaaa acggctgcag cgaatcgcgc
     2521 agcgcttaca aatgtcggtg tatcgggcct tgtgtggatc gacgcgctct gatctcaaca
     2581 tcaccatgcg taagcgccga atccaagcat tactaagcca gcaatgtgcc tgaatctacc
     2641 tattaaaagg ttcttggcca acacgctagt tcatgatgtc aggtagccaa gtggccagtg
     2701 cgggatagaa aatcagtgcc aacaatagca ctaccatcgc caaaataaac ggaatagatc
     2761 ctttgatcac gtcgcctatc gtgacatgat ctcgcccaat cgcctgaatg acaaacagat
     2821 tcaaaccaac aggcggcgtg agcacagcga tctccatggt gatcgtataa atgatgccaa
     2881 accagatcaa atcaaatccc gacgccgcga tcagggggta tatcgtaggc aacgtgatga
     2941 aagtcatcga taccggttcg aggaacatgc caagcacgat gtaaaacaaa atgaccagca
     3001 gcagaacgaa gtaaggcgag aggtcaaaag agaggaaaaa actggtgaac tgttgtggaa
     3061 tttgatagta attcatcacg aaaccaaaca agacacctgc tgagagcaat aagccgagat
     3121 agcccatggt ccgcatggtc gccatgagtg agtccacaaa tgccaccttg gtcaatccac
     3181 caacccaaaa agccagcacg agcgtggcca acgctgccac agcggcggct tcggtcggtg
     3241 tggcaatacc tgcgtaaatg gatacggtga taatggcacc aataataagc acaggcccaa
     3301 gggtcactgc gatctcgcgg gcagaccagc gacgaccctt ttccgctgcc ggaatgtgat
     3361 ccggatgcag ccttgcccag atcacgacga ccagtacaaa aagggatgcc aacaagagcc
     3421 ctgggataat accggcgata aacaagcgac caatggactg gtcagtcacg atgccgtaga
     3481 acaacaaaat caaactaggt ggcaacagca cacttaacgt gcctccagca gctaagacac
     3541 cgctcgagag ccggcggtca tagccaagct taatcatctc aggcaatgca acaccaccga
     3601 tggtcagtga acccaccatg gaagaaccac atacggcacc aaatcccgca caagcaccaa
     3661 tactgccaaa ggccgccgaa ccttttaccg ggataccacc atgcatgaat cgatacagat
     3721 ccggaccaat acgcgatcgt ccgattaact cacctagaaa gacaaataaa ggcacggaca
     3781 gcaagatgta gtctatccag acgccccaaa gcttgagctc ggtactcacc agggatgtcg
     3841 acaggccttg aatgtttaac aaaaacggca acgcggcagc tgccatggca aacggaatcg
     3901 gcaacccaat aatgatgaac agcatgagca gacccatcaa gcctagtccc acttgatacc
     3961 attccatcat catggcttgt tagctccgct tttgttgcgc gcaatcaggc tgctcggtta
     4021 acaccaaaag cagacgcaaa acggcgtacc aggtaaaaag aaccaatgcc accgcgccgg
     4081 gcaaccagaa atacacccgc ggccaaagca atatttcgga agcggcaccc gactgataag
     4141 acttgatagt ggcgtcaatc cctgcatagg agaaaaacgc accaatgagc accatgatca
     4201 gcaagttgaa agccacaagc aagcgacgtg gcctgccttg caaggaatca accacgtaac
     4261 tgaccgttgg ataggcatta acagttaacg cgtacgccaa ccccaaaaaa gcgacaggaa
     4321 ataacagcaa tgcggtggct tctgtcacca ccgcatccgg gtcacctagc acatagcgct
     4381 taaaaacccc gtaagaaatc caggtcatct gcaccaaaat aatgatcccg ccaacaccgg
     4441 cagcccagcg agtcaagcgt tcagtgacgt gaattaatct cggtaacatg gtctcaccca
     4501 acggtcatat cagcgctgtg aagcgacaag gggacgccta tatggcgtcc cccctctcga
     4561 ccttactctt tgtactcatt aaacagatta agcacttgcc cactgagtgc atcaccacaa
     4621 tcagtcttga ccgtgggatt ccatttctgc tgaatgtcgc ccaccagact cgcacgctta
     4681 tccattgata aagatactgc cgcaccacca cctttcatta cagcgttgcc aacctgctca
     4741 ttaacccaat tctcgtaacg aggcttgagc catacttcgg actccgaagc agctgccatc
     4801 agcgcctttt gatcatcggc cgataatgaa tcaaatttct ttttgttgat catgtagatg
     4861 atattgccat agaacatcgt gccattaacc atatatggca tgacatccca aagcttccaa
     4921 gaactgtagg tggccacacc catgttgatg ccatccacaa cgccacgctc ggccgactga
     4981 tagacttctt tgggtgcgat gaacactggc ttaccacccc aagtctcaat catcatcgag
     5041 accaagggac caatagaacg aaccaacttg ccatcgagct tggcaatatc ttctatgggt
     5101 cctttaaacc accactcctg atcataggag tagttcgaat tgatcaaagg aaccagacca
     5161 actttttccg cctctggtct catcagatca gcgaacttgg catccatttc aatctgcttg
     5221 tccaaatcga ccaatgcagg ataaagagag gtcacgcgat agcaagccaa acgcttatct
     5281 gcaggaatcc agctgatatc agacacgccg ccaagcaccg catcaacacc ctcactccag
     5341 ccatgcaacg tcgcagatgg aaaaatctgt accttcactc gcccactggt tttttcctcg
     5401 gctagctgag caaacttttg gaaaccttcg taacgaatat ctgtctcgtt gacataagtc
     5461 gagagccgaa gcgtcgtttg tgcctcgacg ccgctggcca tggcaaacgt tgcggcacac
     5521 acgaccgcac ttagtgcgta ttttggaatt agatgacttt tcataatgtc actcctttaa
     5581 gattgtgaag ctaaggtgct acttgtgtaa a
//
LOCUS       DATBNL010000727         3766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_118126, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000727 DATBNL010000000
VERSION     DATBNL010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118126"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VIC30_12295"
     CDS             complement(<1..496)
                     /locus_tag="VIC30_12295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805195.1"
                     /translation="MPINSRRPVKTALGLCAGGLLVAAGAFAMVQPDSNIKPKQRLVS
                     DTLVFELPPIEARDTQALTFEQKVETRVQSGDTVASILSRLGIEEDGFMAFISSEPLT
                     SKAARRLVPGRSVQAALDADGGMKWIRYYHTPLANNDGRYQTEYLLITKNEDGSFAAE
                     EGAAD"
     gene            744..1982
                     /gene="tyrS"
                     /locus_tag="VIC30_12300"
     CDS             744..1982
                     /gene="tyrS"
                     /locus_tag="VIC30_12300"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008163085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEY7805196.1"
                     /translation="MSPSAASESYPITDAVKESLAVALRGCDELLVQDEFVKKLARSQ
                     ATGTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGRN
                     TTRPALTREQIEENAKTYYAQASLVLDPARTEIRYNSEWCDPLGARGMIELASRYTVA
                     RMMEREDFTQRFRTGKSISVHEFLYPLMQGYDSVALKADLELGGTDQKFNLLVGRELQ
                     REYGQEQHCILTMPLLEGTDGVEKMSKSKGNYIGISEAPESMFGKLMSISDVLMWRYY
                     ELLSFRALTEIEALKAETEAGRNPRDAKVMLAQEIVDRFHGPGHGEKALQAFEARFRD
                     GAVPDDIPEITIAEPEIGIVKALRQAGLVSSGSEAQRNIAQDGVRVDGQKISDKGLTL
                     VSGVYVLQVGKRKFARVKVG"
     gene            2224..2865
                     /locus_tag="VIC30_12305"
     CDS             2224..2865
                     /locus_tag="VIC30_12305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003820605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEY7805197.1"
                     /translation="MQLSSQSFADQAWIPETFAFGKSNPQSHVELSENINPHLLWEDV
                     PAHTKSFVVICHDPDVPSKPDDVNQEDREIPEDLARVDFFHWVLIDLPTDKTEILEGE
                     YSCEVTPRGKGGPLAPNDTRQGVNDFTNWFAADHDMSGDYFGYDGPCPPWNDSILHRY
                     VFTVYALDLEKLPLDGTFTGQEVLDAMDGHILDKASLTGIYTLNPRLAPAQVG"
     gene            3016..>3766
                     /gene="glyA"
                     /locus_tag="VIC30_12310"
     CDS             3016..>3766
                     /gene="glyA"
                     /locus_tag="VIC30_12310"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEY7805198.1"
                     /translation="MFDRTLTLDRVDPDVWNAIQKEDQRQEQHIELIASENYTSPAVM
                     QAQGSQMTNKYAEGYPGKRYYGGCEYVDIVEQLAIERLKQLFGAEAANVQPNSGSQAN
                     QAVYLAVLKPGDTVLGMSLAEGGHLTHGASVNASGKLYNFLQYGLDANEVLDYDKVEA
                     LAREHKPKLIVAGASAYSLKMDFERFAQIAKDNGALLLVDLAHYSGLVAGGAYPNPVP
                     HADFVTSTTQKGLRGPRGGIIMMKAEHEKIIN"
BASE COUNT          862 a          968 c         1042 g          894 t
ORIGIN      
        1 tatcggcggc cccttcctca gcagcaaatg agccatcttc gttcttggtg attagcaggt
       61 actcggtctg gtagcgaccg tcgttatttg ccaggggcgt gtggtagtag cgaatccatt
      121 tcatgcctcc gtcagcatcg agcgcggctt gaacggatct gcctggtacc agtcgacgcg
      181 cagctttgct tgtcaaaggt tcgctcgaga tgaaagccat aaagccatct tcttcgatgc
      241 ctagccgtga aaggatgctg gccaccgtat caccggactg cacccgtgtt tcgactttct
      301 gttcaaaggt cagggcttgg gtgtcacgcg cttcaattgg cggtaactca aaaaccaatg
      361 tatcggagac caaccgctgc ttgggcttga tgttgctatc gggctgtacc attgcaaaag
      421 cgcccgcggc gaccaatagc cccccagcac acaagccaag ggcggtttta acgggtcttc
      481 tggaattaat tggcattgcg atagaacctc acatcagtct aggtgcagaa cttggccgca
      541 ggtatccgca cgtgcaccac ctaagtggcg gcaagttggt ttgctgtcat aatgttagct
      601 tatatgtcat ggacttaaca aggattgatg tcgcgcaacc tcatctttag atatctcgat
      661 ttttgaggct gtttgcactt ggcgccagtt tttggtgagt actttccgtc caatctccta
      721 aatgatccta actttttgct gtcatgagcc catctgctgc ctccgagtct taccccatta
      781 ctgatgctgt taaagagagt cttgccgttg ccttgcgcgg ttgtgatgag ctgctcgttc
      841 aagacgagtt cgtaaaaaaa ctggctcgca gtcaagcaac cggcacgcct ttgcgtatca
      901 agcttggtct ggatccgacg gcgccggata ttcatctcgg tcatacggtg gtgctcaata
      961 aactgaggca actgcaagat ctcggtcaca ctgtgatctt tctgattggg gatttcacct
     1021 cgatgattgg tgacccctca ggtcgcaaca ccacgcgacc ggcgctcaca cgtgagcaga
     1081 ttgaagagaa cgctaaaacc tactacgctc aggccagctt agttctggat cctgctcgca
     1141 cggaaatccg ctacaactcc gagtggtgcg acccgctcgg tgcgcgcggc atgatcgagc
     1201 tggcctcgcg ttatacggtg gcgcgcatga tggagcgcga agatttcacg caaaggtttc
     1261 gcactggcaa gtcgatttct gtgcacgaat ttctttaccc gttgatgcaa ggctatgact
     1321 cggttgctct aaaagccgat cttgagctcg gcggcacgga ccagaagttc aatctcttgg
     1381 tcgggcgcga gcttcagcgc gaatacggcc aggagcaaca ctgtattctg accatgccgc
     1441 tgcttgaagg cactgacggc gttgagaaga tgtccaagtc caagggcaac tatatcggta
     1501 ttagcgaggc gcccgaatcc atgttcggta agctaatgtc catctcggac gtgttgatgt
     1561 ggcgttacta tgaattgctg tcgtttcgcg cgctcaccga gatcgaggcg cttaaggctg
     1621 agactgaggc ggggcgcaac ccgcgtgatg ccaaagtcat gctcgcacaa gaaatcgtgg
     1681 accggtttca tgggccaggc catggagaaa aagccttgca agcgtttgag gcccggttta
     1741 gagacggggc agtgccagac gacatacctg aaatcaccat cgctgagcca gaaattggta
     1801 tcgtcaaggc attacgccag gcaggcttgg tcagctctgg gtctgaagcg cagcgcaaca
     1861 tcgctcaaga tggcgtacgg gtcgatggcc agaagatctc agataaaggg ttaaccctag
     1921 tttctggtgt ttatgtttta caagttggca aacgtaaatt tgcacgtgtt aaggtaggtt
     1981 gagcaaatta agtaaaaaaa tagctgtcct taagtacagt agtgcgttgg cgcacggttc
     2041 gcgaagttcg catggttcgc atcgcgttca accccaccgg cgttgaccaa tgtcatacca
     2101 aactcgccgt agtttggtaa aacagtacta ctacaaaatg accaacgtta attgaagtag
     2161 ctcggattgc ctgtggcaat ccgcagggat ggctgtccca tcccgcttga aaaggagaag
     2221 ttcatgcaac tgtcgagcca atcatttgcg gatcaagctt ggatccctga aacatttgcc
     2281 ttcggtaagt ccaaccctca gtcgcatgtt gaactgtctg agaatatcaa cccccactta
     2341 ctgtgggaag acgtgccggc acacaccaag tcgtttgtgg tgatttgtca tgaccctgac
     2401 gtgccaagta agcccgatga cgtgaaccaa gaagatcggg agatcccaga ggatctggca
     2461 cgggtggatt tctttcattg ggtgctcatt gacttgccga ctgataagac tgaaatcctt
     2521 gagggtgaat acagctgcga agtgacccca cgtggcaaag gtgggccgtt ggcaccaaac
     2581 gatacgcgcc agggtgtcaa tgatttcacc aactggtttg cagctgatca cgacatgtca
     2641 ggtgattatt tcgggtatga cgggccatgc ccgccctgga atgattcgat tctgcaccgc
     2701 tatgtgttta cggtttacgc cctcgaccta gaaaaactgc ctttggatgg cacgtttacc
     2761 ggccaggaag tcctagacgc catggatggc catattctgg acaaagccag cctaacgggt
     2821 atctacacac tgaacccgcg gctggcacca gcgcaagtcg ggtaaggtag gcgcaggttt
     2881 agccaatcct gccgcatcgg gggccacagg tggttctcgg tgcgcgcggc ggtacaatat
     2941 gtcaattgcg aggcttgggg tggtcgtgat gcgcctgccc gggtcttttt tattgatcac
     3001 cgccaggata cgtccatgtt tgaccgcaca cttaccctcg atcgggttga ccccgatgtc
     3061 tggaacgcca ttcagaaaga agaccagcgt caagagcagc atattgagct gattgcttct
     3121 gagaattaca ccagcccggc tgtgatgcag gcccaaggct cgcaaatgac caacaagtat
     3181 gctgaaggct atcccggcaa gcgttactac ggcggctgcg agtatgtgga tattgtcgag
     3241 cagctagcca ttgagcgctt gaaacagctt tttggggctg aggcggccaa cgtgcagccc
     3301 aattctggct cgcaagccaa ccaagccgtc tatctagcag tgcttaagcc cggtgacacg
     3361 gtattgggta tgagcttggc tgagggcggt cacttgaccc atggcgcaag cgtcaatgca
     3421 tcaggcaagc tctacaactt tttgcagtac ggattggacg ccaacgaagt gcttgattac
     3481 gacaaggttg aagccttggc gcgtgaacac aagcccaagc tgatcgtggc cggtgcgtcg
     3541 gcttattcac tgaagatgga ttttgagcgg tttgcgcaga ttgccaaaga caacggcgcg
     3601 ttgttgctcg ttgatctggc gcactactca gggctcgtgg ccggcggcgc ttatcccaac
     3661 cctgtgccgc acgctgactt cgtgacctcg accacgcaga aagggctacg tggaccgcgc
     3721 ggtggcatca tcatgatgaa ggccgagcac gagaagatta ttaact
//
LOCUS       DATBNL010000728         1873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_148567, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000728 DATBNL010000000
VERSION     DATBNL010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148567"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..1237)
                     /gene="glpQ"
                     /locus_tag="VIC30_12315"
     CDS             complement(206..1237)
                     /gene="glpQ"
                     /locus_tag="VIC30_12315"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: protein motif:HMM:NF008354.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEY7805199.1"
                     /translation="MSRSPANRPLIIAHRGASGYLPENTLAAKAVAHAQGADYWETDV
                     QATRDGELVVLHDLHLEGLSDVEAVYPDRARDDGHYYVIDFTLAELRTLNLTERIVSD
                     VPGGIATYPNRFPPGKSRFQIHTLAEEIELLQGLNKSFQREVGLYLELKAPWFHEDVG
                     FDLCQAALATLKRYGYTQKTDLVILETFDAQALQRIKQSLMPQMQMDLRLGQLVGYNE
                     WQTTCERDAAGNWVTVDSDWMLTPTGLEKIATYADGVGVAISLLYANPSNPKNTTVPE
                     PAAWIGKAREEGLVIHTYTLRADALPLFAANVDVMHDWLLNVARVDGVFTDFPDLMVR
                     FVRDSAERI"
     gene            1568..>1873
                     /locus_tag="VIC30_12320"
     CDS             1568..>1873
                     /locus_tag="VIC30_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019430110.1"
                     /note="with UgpACE is involved in the uptake of
                     glycerol-3-phosphate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY7805200.1"
                     /translation="MKSILKLSLAATLSSMALGATAQTEIQWWHAMGGKNGELIQGMA
                     DKFNASQDKYKINPVFKGSYSETMTAAIAAFRAKQQPAIVQVFEVGTATMMYAKDAIY
                     "
BASE COUNT          451 a          504 c          481 g          437 t
ORIGIN      
        1 tcgcgggctg ctgacgaaaa cgattcagcg cctagatcca acacttcctg ctcaaggaaa
       61 gatattgaca cggtggcgtt tacagttaaa cgtcactacc gaagagcttc tagccgtgag
      121 attggcttaa tgattccgca acgcaatatg tcaccgattt gctgatttac caagagccaa
      181 tcagtagctg ccgataccag gcaagttaga tacgctcggc gctgtcccgc acaaatcgca
      241 ccatcaaatc cgggaagtca gtgaacaccc cgtcgacgcg agccacattt aacaaccagt
      301 catgcatcac atcgacgttg gccgcaaata gaggtagcgc atcggcacgc agcgtataag
      361 tgtggatcac caaaccctct tctctagcct ttccaatcca ggcagctggt tcaggcactg
      421 tggtgttttt tgggttgctg gggttggcgt acagcaatga gatggccacg cccacgccat
      481 ccgcgtaggt tgctattttc tccaagcctg ttggcgtgag catccagtcc gaatccacag
      541 tcacccagtt acccgctgca tcacgttcgc acgtggtttg ccattcgttg taaccaacaa
      601 gttggcctaa tcgcagatcc atctgcatct ggggcatgag tgattgtttg atccgttgca
      661 aggcttgggc gtcaaacgtc tcgagaatca ccaagtcggt tttttgggta tagccatagc
      721 gcttcagggt agcgagcgca gcctggcaaa gatcaaagcc gacatcttca tgaaaccacg
      781 gcgctttgag ctcaaggtaa agcccgacct ctcgttgaaa gcttttgttt aggccctgca
      841 gcagctcaat ttcctcagct agtgtgtgga tctgaaaccg tgatttgccc ggtgggaaac
      901 gattggggta cgtggcaatg ccacccggca catcgctgac aatacgctca gtcaggttca
      961 atgtgcgcaa ctcggccaag gtgaaatcga tcacatagta gtggccgtcg tctcgggctc
     1021 gatctggata taccgcctct acatcactta agccctcaag atgcaggtca tgcaacacca
     1081 cgagttcgcc atcgcgcgtg gcctgcacat cggtctccca gtagtcagcg ccttgggcat
     1141 gcgccacggc tttggcggcg agcgtgttct ccggcagata gccgctagcc ccccggtggg
     1201 cgatgatcaa tggtcggttt gctggcgagc ggctcattgc tgaatttcca tctaaaaatt
     1261 ggtctaggga cttatctgtg ggaatgtctc tgggtatgac tgtgggtgtc tatggacagg
     1321 ctcgacacca caatccacag atactaggga aaccactatg ttactgatct agcagactag
     1381 gtgtcagccc ggatgttttg tactgctcag atcatggtac acgtcttaat attgtcacaa
     1441 acccgtcatg ttacggtgat caactgcggt ttttacagta tgtatctaac atcaggtacg
     1501 tacacacgtg ggtgcactgt tcggctgcag ccacgccaat gaatgtctaa ctttcaaagg
     1561 ggcttacatg aaatctatcc ttaaacttag cttggccgct acgctgtcaa gcatggcgct
     1621 tggcgccaca gcccagaccg agatccaatg gtggcatgcc atgggtggca aaaacggcga
     1681 gctcatccaa ggcatggctg acaagttcaa tgcctcacaa gacaaataca aaatcaaccc
     1741 ggtattcaag ggtagctaca gcgaaaccat gacagcggcc atcgccgcct ttcgtgccaa
     1801 acagcagcca gccatcgtgc aggtgtttga agtgggcaca gcgacgatga tgtacgccaa
     1861 agatgcgatc tac
//
LOCUS       DATBNL010000729         1727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_18243, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000729 DATBNL010000000
VERSION     DATBNL010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18243"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="VIC30_12325"
     CDS             <1..600
                     /locus_tag="VIC30_12325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEY7805201.1"
                     /translation="CESMLIVGIMIPATALLLFTGGLLGAGTLPAAPILLWGIAGAIV
                     GDAVSFWLGRWIGPTILRWRIVKRHRSTVARARLFFYRYGFLSIFFGRFLGPIRSTIP
                     TVAGVMGMSHWRFQVANALSAALWVPMMLLPGFLAAKSVQAAEHASNLTLYIGAGLSV
                     VVGVWLLYMFTKSRGSANDRQQKRAERKHAKRPSQEKSS"
     gene            597..1049
                     /gene="dut"
                     /locus_tag="VIC30_12330"
     CDS             597..1049
                     /gene="dut"
                     /locus_tag="VIC30_12330"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020655028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEY7805202.1"
                     /translation="MKTVDLKILDDRLKEHLPSYATPGSAGLDLRACLDVPTDIEPGQ
                     TILVPTGLSIHIADPGYAAMILPRSGMGHKNGIVLGNLVGLIDSDYQGPLMVSTWNRG
                     KSTFRLEPMERLAQLVIVPVVQAQFRVVDDFESESDRGAGGFGSTGSK"
     gene            complement(1180..>1727)
                     /locus_tag="VIC30_12335"
     CDS             complement(1180..>1727)
                     /locus_tag="VIC30_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7805203.1"
                     /translation="GTLTDNNGRKADFRNLIAIMTTNAGAEAMSKPSIGFSNTREAGD
                     EMGEIKRLFSPEFRNRLDAIVHFAPLSKDIILRVVDKFLMQLEDQLHEKRVDAAFSEK
                     LRDYLAERGFDPLMGARPMQRLIQDMLRRALADELLFGRLVNGGTVTLDLDDNDQVVL
                     HVEDSGGSPKKKESPKELVHE"
BASE COUNT          378 a          475 c          434 g          440 t
ORIGIN      
        1 tgcgagtcca tgctgatcgt cggcatcatg atcccggcta ccgccttgtt gctatttact
       61 ggtggtttgc ttggtgcagg caccttgcca gcggcaccga ttttgttgtg gggtattgcc
      121 ggcgccatcg tcggcgatgc agtttccttc tggttaggac gctggattgg cccgaccatt
      181 ttgcgttggc gcatcgtcaa acgccatcga agtacggtgg ccagggcccg cctcttcttt
      241 taccgatacg gctttttatc gatctttttt ggtcgatttc tcgggcccat tcgcagcacc
      301 attccaaccg tggccggtgt catgggcatg tcccattggc ggtttcaggt ggcaaatgcc
      361 ttgtccgctg cgctttgggt tcccatgatg ttgttgccgg gtttcctggc tgccaaaagt
      421 gttcaagcgg cagaacacgc cagtaatctg acgctttaca ttggtgcggg cctatccgtt
      481 gtcgttggcg tttggttact ttacatgttt actaaaagcc gtggatcggc caatgaccgc
      541 caacaaaaac gtgccgaacg caaacatgcc aaacgcccat cccaggagaa atcctcttga
      601 aaaccgttga cctcaaaatc cttgatgacc gcttgaaaga gcacttgcca agctacgcca
      661 caccaggctc agcaggactc gatctgaggg catgcctaga cgtgccaaca gacattgaac
      721 ccggccagac cattctagtg cccacaggct tatccataca tattgcggat ccgggttatg
      781 ccgctatgat tttgccgcgc tctggcatgg gtcacaaaaa cggtatcgtg ctgggcaatc
      841 ttgtcgggct tattgactcc gattatcaag gcccgttaat ggtctcgact tggaatcgtg
      901 gcaagtcaac atttcgcttg gaacccatgg aacgcttggc gcaactggtg atcgtgccgg
      961 ttgttcaagc ccaattccgc gtcgttgatg actttgagtc cgaaagcgac cgtggtgctg
     1021 gtgggtttgg cagcaccggc tcaaagtgaa agcctccttt atttaacgaa ccacaactga
     1081 taagacatac ggaataattc ctaaagccga acaacaaggg ccccagatac ctggggccct
     1141 tgttgtttac tgctcggtta catgaatgac aattaaatcc tactcatgca ccaactcttt
     1201 gggtgactct ttcttcttgg gcgagccacc actgtcttca acgtgcaaca cgacctgatc
     1261 attgtcatca aggtctaacg tcaccgtacc accgttcacg agcctgccaa acaacaactc
     1321 atcggccagt gcacggcgca gcatgtcctg aatcagacgc tgcatgggac gcgcacccat
     1381 taagggatca aagccacgct cggccaagta gtcacgcagt ttctccgaga aagcggcatc
     1441 gacccgcttc tcgtgtaact gatcttctag ctgcatcagg aacttgtcga ccactcgcaa
     1501 gatgatgtcc ttagataaag gtgcgaaatg tacgatcgca tcgagtctat tgcggaactc
     1561 tggtgaaaag agacgcttga tttcgcccat ttcatcaccc gcttcacgcg tgttagagaa
     1621 gccaatgctg ggcttactca tcgcttctgc accggcgttg gtcgtcatga tcgcgatcaa
     1681 gttacggaaa tctgccttgc gaccgttgtt gtctgtcaaa gtgccat
//
LOCUS       DATBNL010000730         3795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_118140, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000730 DATBNL010000000
VERSION     DATBNL010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118140"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1483)
                     /locus_tag="VIC30_12340"
     CDS             complement(<1..1483)
                     /locus_tag="VIC30_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805204.1"
                     /translation="MSRVVSVQTNFTGGEIDPKIRARIDLQQYYNSLEKAQNVIIQPQ
                     GGLIRRDGSRYITELTAAAGDAVRCVPFEFSVDDSYMLIFTDERMYVFKDRQLITNIN
                     ASGEDYLTVTNITDTVIPTMCWAQSADTLIIVQQSMTPQKIVRGATDADWTITDLSFD
                     FIPKFAFTLTTAAGSTFVTHEYLSLDATDGQITVTAKDSGDADEPIFTASAATYENQF
                     INISPQGRLRVVKKVSDSQLKCYAEIPVFESDVTAAETRIPVADWEFESGYEDTWSAN
                     RGWPRAATFYESRLYLGGSTSRPSTLWGSRVGQFFNFDPGESFDDAAIEGTLDTGRFN
                     AIVDLYAGRNLQIFSTGGEFYVPQTLGDPITPSTFGIQEQTSNGSKPGVRVVNVDGAT
                     VFLQRQGKALAEFIFSDTVNGYVSTKISLLSSHLLKNPIDMSVRKATSTDEGDRLLLV
                     NSDDGSIACYTLLRSQQIIAPSEWVTDGEYIAIGVDIEDIYTVV"
     gene            complement(1480..2097)
                     /locus_tag="VIC30_12345"
     CDS             complement(1480..2097)
                     /locus_tag="VIC30_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805205.1"
                     /translation="MASGDTKLSICSDALIMLGASPLSSFSDGTDAAQICDRLYDDLK
                     DTLVASYPWSWSFKKAQLARLSEEPVNEWKYNYALPGDRLSGVRAVFNSGSSGARSIQ
                     SGWEILGDKLQTSEEQIYIDYQYSPQEFELPTYFVQLLKYAMAADIAETVTDQITKAQ
                     YFEQKAFGSPGENRRGGHMRVAMNIDGANKPTEAFEDYSLIAVRQ"
     gene            complement(2145..2426)
                     /locus_tag="VIC30_12350"
     CDS             complement(2145..2426)
                     /locus_tag="VIC30_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805206.1"
                     /translation="MAFSQDNFQPIGGQAKAGNAPQVWSYTAPGTDALADINTEGYFN
                     AVADLLKVGDLIYVSDTSVPTASLVVVLSNTGTVVDVSDGTAIAVTDAD"
     gene            complement(2440..3282)
                     /locus_tag="VIC30_12355"
     CDS             complement(2440..3282)
                     /locus_tag="VIC30_12355"
                     /inference="COORDINATES: protein motif:HMM:NF040375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HEY7805207.1"
                     /translation="MAVQISNAFVTLFDSEVKQAYQGQRILAGVTRERTGVEGSTVKF
                     PKIGKGSATIRVPQTDVTPLNVSYSQVTATMEDYIAAEYSDIFNQQKVNFNERQELVQ
                     VVSGAIARRMDQVVLDALAASSTSLAVSHDVGGTETNLNIEKLREAKKLLDAGNVPME
                     GRTMLIHANSLSALLGETEVTSADFNTVRALVTGEINTFMGFRFITFGDRDEGGLPVD
                     GSADRTLYAFHRDAVGLGVGMGQTSRVDYIPEKTSFLVASMFSAGAVAIDDEGIVKIT
                     CRES"
     gene            complement(3445..>3795)
                     /locus_tag="VIC30_12360"
     CDS             complement(3445..>3795)
                     /locus_tag="VIC30_12360"
                     /inference="COORDINATES: protein motif:HMM:NF017233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805208.1"
                     /translation="ENVKTDRDQELQKLGPKGDKVVSSLNSWLGKLANSGTLSHEEVD
                     AIAGAATSANYIKALNKIRASYGEQTIPDVNVQEGKAMSRADLDALVADERYGKDMAY
                     TQTVERKFMEFFGE"
BASE COUNT          948 a          998 c          895 g          954 t
ORIGIN      
        1 taacaaccgt gtagatgtct tcgatgtcaa cgccgatcgc aatgtactca ccgtcggtta
       61 cccactcaga cggcgcaatg atctgttgtg agcgcaacaa cgtgtagcac gcaatcgagc
      121 catcgtcaga attgactagc agcagtcggt caccttcatc ggttgacgtt gctttgcgca
      181 ccgacatgtc gatcggattc tttagaaggt gcgatgacaa caatgaaatt ttagtggaga
      241 catatccgtt aactgtgtcg ctgaaaatga actcagctag cgccttcccc tggcgctgta
      301 aaaacacggt cgcaccatcc acgttgacga cccgaacgcc aggcttggat ccgtttgacg
      361 tctgctcttg tatgccaaac gtcgatggcg taattggatc gcctaatgtt tgcggaacgt
      421 agaactcgcc gcctgtcgaa aagatctgca agttacgacc ggcatacaaa tccacgatgg
      481 cattgaaacg accggtatcc aatgtgcctt cgatcgctgc gtcgtcgaac gactcgcctg
      541 gatcgaaatt aaaaaattga ccaacccgac taccccacaa tgttgatgga cgcgatgttg
      601 agccaccaag atatagacgg ctctcataaa acgtagcagc tctcggccag ccgcgattgg
      661 cagaccaagt gtcctcatat ccggactcaa actcccaatc tgcaacaggg atgcgggttt
      721 ccgccgccgt aacatccgat tcaaacacag ggatttctgc gtaacacttc agctgcgaat
      781 cagatacttt tttgacaacg cgcaaacgcc cctgtggaga aatgttaata aactggtttt
      841 cgtaagttgc agcagacgcc gtgaagattg gctcatcagc atcaccggaa tcttttgctg
      901 ttaccgtgat ctgcccatcc gttgcgtcca gtgacagata ctcgtgcgtc acaaaggtgg
      961 acccggctgc agtagttagc gtaaatgcaa actttggaat gaaatcaaac gaaaggtcag
     1021 tgatggtcca gtcggcatca gttgctccgc gcacaatctt ctgtggcgtc atcgattgct
     1081 gcacgataat caatgtgtca gctgactgcg cccagcacat tgtcgggatt accgtgtccg
     1141 taatgtttgt cacggttaaa tagtcttcgc cggacgcatt gatgtttgta atcagctggc
     1201 gatccttaaa cacatacatg cgctcatctg taaagatcag catgtagctg tcgtcaacag
     1261 aaaactcaaa cggaacgcaa cgcacagcgt caccagcggc cgctgtgagc tctgtgatat
     1321 atcggctgcc atcacgtcgt attagcccgc cctgcggctg tatgatgacg ttctgcgcct
     1381 tttctaagga gttgtaatac tgctgcagat caattcgcgc acgaatcttt ggatctatct
     1441 cgccgccggt gaaatttgtc tgcacactaa caacacgact cattgtctta ccgcgatcaa
     1501 agagtaatct tcaaaggctt cggtcggctt gttcgcacca tcaatgttca ttgcaacacg
     1561 catgtgcccg ccgcgacgat tttcgccagg tgatccaaac gccttttgct caaaatactg
     1621 cgccttggtg atctggtctg taaccgtctc agcaatgtcc gcagccatcg catactttag
     1681 cagctgcacg aaatatgtcg gcagctcaaa ttcttgtgga gaatactggt agtcaatata
     1741 aatctgctct tcgcttgtct gcagtttgtc gcccaaaatc tcccacccgc tttggatcga
     1801 gcgcgcacca gatgagccag agttaaatac agcgcgcacg cctgacaatc tatcgccagg
     1861 taacgcgtag ttgtatttcc attcgttgac aggttcttca gataaccgcg caagctgcgc
     1921 tttcttgaat gaccatgacc acggatacga cgcaacgagc gtgtccttta ggtcatcgta
     1981 taatcgatcg cagatctgcg ctgcgtcggt accgtctgaa aacgacgaaa gaggcgacgc
     2041 ccctagcata atcaacgcgt ccgaacagat ggacagtttt gtatcaccag aagccatgtt
     2101 tcacctcagt agaaaagact cccccagagg gggagccgat tcgtttagtc agcgtctgtt
     2161 acagcaattg ctgtaccgtc agacacatca acgactgttc cagtgtttga caatacaaca
     2221 acaagtgatg ctgttggtac gcttgtgtca gacacataga ttaaatcgcc aactttcaac
     2281 aagtcagcta ctgcattgaa gtaaccttct gtgttgatgt ctgccaacgc atcagtgcca
     2341 ggtgcagtgt atgaccacac ttgtggtgca tttcctgctt tagcctgccc gccgattggc
     2401 tggaagttgt cttgtgaaaa agccattgtt caatcctcct tatgattcac ggcaagtgat
     2461 cttgacgata ccttcgtcat cgatcgctac cgcaccggct gagaacattg acgcaaccag
     2521 gaaagaagtc ttttctggaa tgtagtcaac gcgtgaagtc tggcccatgc ctacgccaag
     2581 accaaccgcg tcgcgatgga aggcatacag tgtacggtca gctgatccgt ctactggcaa
     2641 gccaccttcg tcacgatcac caaaggtgat gaaacggaag cccatgaacg tgttgatttc
     2701 gcctgtaacc agtgcgcgta ctgtgttgaa gtcagcagat gtaacctcag tctcacccaa
     2761 caaagcagac aagctgtttg catggatcaa cattgtgcga ccttccatag gaacgttgcc
     2821 agcgtcgagg agcttcttag cttcacgcag cttttcgatg ttgaggttag tttcagtgcc
     2881 gccaacgtcg tgacttactg ccaaagaagt tgaagacgca gcaagtgcat ccaaaacaac
     2941 ctggtccata cgacgtgcaa tggcgccaga tacaacttga acaagctctt gacgctcatt
     3001 gaagttgacc ttctgctggt tgaaaatgtc cgaatactca gctgcgatgt agtcttccat
     3061 cgtcgcagta acctgcgagt aggatacatt cagtggagta acgtcagttt gtggaacgcg
     3121 aatagtcgca gaacctttgc cgatcttcgg gaacttaact gtagaacctt cgacccctgt
     3181 gcgctcgcgg gtaacaccag ccaggatacg ctgaccctgg tacgcctgtt ttacctctga
     3241 gtcaaagagg gtcacaaagg cattagaaat ttgtactgcc atgtgtactt ctccaaatca
     3301 aaattgtctt taagggtaaa acctgtgacg gttatccagt cgggccgtgt aattcaggtc
     3361 gccggctcag gaatctgagt tgtcggttgg ttgaaatata acagattttt tgcaaagaga
     3421 aagggggccg tagcccccag cggattattc tccaaaaaac tccatgaact tacgctcaac
     3481 agtttgcgtg tatgccatgt ccttaccgta tcgctcatcc gcaacaagcg catcaagatc
     3541 ggcgcgggac attgccttgc cttcttgcac gtttacatca gggattgtct gctcaccgta
     3601 tgacgcacgg attttattga gcgccttgat gtaatttgcg ctagtggctg cgccggcaat
     3661 cgcatcaact tcttcatgcg acagtgttcc ggagttagcc aacttaccaa gccagctgtt
     3721 caaacttgat acaaccttgt cacctttcgg cccaagtttc tgcagctcct gatctcggtc
     3781 agtctttacg ttctc
//
LOCUS       DATBNL010000731         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_58653, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000731 DATBNL010000000
VERSION     DATBNL010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58653"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1467)
                     /gene="mrdA"
                     /locus_tag="VIC30_12365"
     CDS             complement(<1..1467)
                     /gene="mrdA"
                     /locus_tag="VIC30_12365"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY7805209.1"
                     /translation="MFDFKSASQRARSRFGLRAWVAALVVLLAFALLGWRLWVLQVQE
                     HPGLLQRADSNRTAVVPIPPRRGEIVDRHGEVLARNYLSYTLDVVPAQVDSMDDLLSA
                     LEQVVTLSDRQKRQFDRRLRESGPFTEVLLRNDLSDTEAAYFAAQAFRFPGVELKARW
                     VRQYPQGQSAAHVVGYVGRISERDERALRATDALGNYRGTDIIGKKGVEKSWESRLHG
                     QTGIESLEVTARGRPVRSLHRLDPVPGGNLVLSLDMRLQRVAEQAFEGQRGALVAIDP
                     NNGEILAFVSQPSFDPNLFVDGIDHESWRALNESEDNPLITRPVYGTYPIGSTYKPFV
                     ALAAMALGKRGPDEEIYDPGFYEMGKTRFRNAGSIPYGRVDAHKSLVVSSDVYYYSLA
                     ELITIDSLHDFMKPFSFGQPTGIDLVGERRGILPSRDWKIAAFRDPEQQRWYPGETVS
                     VLIGQGYNAFSLMQLAQATAVLANGGTYYKPRLVKAVRP"
     gene            complement(1506..>1851)
                     /gene="mreD"
                     /locus_tag="VIC30_12370"
     CDS             complement(1506..>1851)
                     /gene="mreD"
                     /locus_tag="VIC30_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEY7805210.1"
                     /translation="VGLIAGFLLGLFIDVHDAGPLGQHALTYVLVCYGAVVLRRRMLR
                     FNLWRQALHMLPVFLVARTVTLVLTAALMGVWPGWSWMVGVALTGLLWVPVGWILLLP
                     GNRLAAMNSQTD"
BASE COUNT          485 a          542 c          458 g          366 t
ORIGIN      
        1 tggtcgaact gctttgacca agcgtggctt gtaataagta ccgccgttgg caagcactgc
       61 agtggcttgg gccaactgca tcaaagaaaa cgcgttatag ccttggccga tcagtacaga
      121 aaccgtctca ccgggatacc aacgctgctg ttcagggtct cgaaacgctg ctatcttcca
      181 atcccgcgac ggtaaaatac cccgtctctc gcccaccaga tcaatgccag tcggttgccc
      241 gaaactaaag ggcttcataa agtcatgtag cgagtcaatg gtaatgagct cagctagtga
      301 gtagtagtag acgtctgaag acaccactag cgatttgtgt gcatcaacac ggccgtaggg
      361 tatcgatccc gcgtttcgaa accgagtctt acccatctca taaaacccgg ggtcatagat
      421 ttcttcatcc gggccacgct tgccaagcgc catcgctgca agggccacaa agggtttgta
      481 agttgaaccg atcgggtaag taccgtacac cgggcgggta attaatggat tgtcttcaga
      541 ctcgttaagg gctcgccagc tctcatgatc aatgccatcg acaaacaaat tgggatcaaa
      601 cgatggttgg gacacgaaag ccaatatctc accattgttc ggatcaatgg cgacgagcgc
      661 gccgcgctgc ccttcaaatg cttgctcagc cacacgctgc aaacgcatat caagcgataa
      721 gacgaggtta ccgcctggca cagggtctag acggtgcaaa gagcgcacag gccggccccg
      781 tgccgtgact tcaagtgact cgatgccggt ttgcccgtgc agtctggact cccaggactt
      841 ctcaacgccc tttttaccga tgatatcggt tccccgataa ttgccaagcg catcagtggc
      901 acgcaacgcg cgctcgtcac gctcagagat acgtccaaca tagccaacca catgtgccgc
      961 actctgaccc tgagggtatt gtctgaccca gcgtgccttg agctctacgc ccgggaaacg
     1021 aaatgcctgt gccgcgaagt aggctgcttc tgtgtccgac aagtcattgc gcagcagaac
     1081 ttcggtaaac ggccctgatt cacgcaaccg acggtcaaac tgacgttttt gacgatctga
     1141 caacgtgacc acttgctcaa gcgcggacaa taaatcatcc atggagtcaa cttgggcggg
     1201 cacgacgtcc aatgtgtagc taagatagtt gcgcgctagg acctcgccat gtcgatcaac
     1261 gatctcgcct cggcgaggcg ggatgggtac aacagctgtt cggttgctgt cagcgcgctg
     1321 caatagtcca gggtgttctt gcacctgtaa gacccacaaa cgccagccca gcaaagcgaa
     1381 agccagcagc accaccagtg cggctaccca ggcacgcagg ccgaaacggc tacgtgcacg
     1441 ctgtgaggcg cttttgaaat caaacatgac ttatcgacat accattgcga gacaacctcg
     1501 aaccgtcaat cggtttggga gttcattgct gccaagcgat tgccaggcaa caacaagatc
     1561 caccccacag gcacccaaag cagcccagtc agtgccacac ctaccatcca gctccaaccg
     1621 ggccaaacac ccataagtgc tgctgtcagc accaatgtta ccgtgcgggc cactaaaaag
     1681 actggcagca tatgcaaggc ttgtcgccat aaattaaatc gcaacatccg ccgtctaagc
     1741 accactgcac cgtagcagac cagcacatag gttaacgcgt gctgacccaa gggacctgcg
     1801 tcatgaacgt caataaatag accaagcaaa aaaccagcaa ttaaaccaac a
//
LOCUS       DATBNL010000732         2583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_38103, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000732 DATBNL010000000
VERSION     DATBNL010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38103"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..451)
                     /gene="ftsB"
                     /locus_tag="VIC30_12375"
     CDS             complement(143..451)
                     /gene="ftsB"
                     /locus_tag="VIC30_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015065137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEY7805211.1"
                     /translation="MRLIFLTLLVLFVLIQYPLWLGQGGWFAAWNLQEEVAEQQSIND
                     GLRARNQAMQAEVDDLRSGTQASEERARRQLGLMQDKEVFIQILPGTENGAASSASTD
                     "
     gene            complement(463..1749)
                     /gene="eno"
                     /locus_tag="VIC30_12380"
     CDS             complement(463..1749)
                     /gene="eno"
                     /locus_tag="VIC30_12380"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY7805212.1"
                     /translation="MSAIVDIIGREIIDSRGNPTVECDVLLESGAMGRASVPSGASTG
                     EREAIELRDGDKARFLGKGVLNAVQHVNTDISEALMGLDAQEQTFIDRTMIELDGTET
                     KARLGANAILSVSMAVARAAAEESGLSLYRYFGGSTPMSMPVPMMNVINGGAHANNSL
                     DLQEFMILPIGATSFREAVRMGAETFHALKKLIDEQGMSTAVGDEGGFAPNVTNHEAA
                     IELILRAIENAGYEPGTQMALGLDCAASEFYRDGQYHLAGEGGLTLSSSDFANLLATW
                     CDKYPIISIEDGMSENDWDGWKVLTETLGKKVQLVGDDLFVTNTKILKQGIDQNIANS
                     ILIKINQIGTLSETFAAIEMAKRAGYTAVVSHRSGETEDSTIADIAVATNAMQIKTGS
                     MSRSDRMAKYNQLLRIEEELAEVASYPGRDAFYNLR"
     gene            complement(1904..>2583)
                     /gene="kdsA"
                     /locus_tag="VIC30_12385"
     CDS             complement(1904..>2583)
                     /gene="kdsA"
                     /locus_tag="VIC30_12385"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015065134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY7805213.1"
                     /translation="RSSASSFRGLGMAEGLQILADVRQTLQVPILTDVHDIAQVKPVA
                     EVVDVLQTPAFLCRQTDFIQACAASGKPVNIKKGQFLAPEDMVQVVRKAELAAQEAGV
                     TPQIMVCERGASFGYHNLVSDMRSLAIMRQTGCPVVFDATHSVQLPGGQGTSSGGQRE
                     FVPVLARAAVAVGVAGLFMESHPDPAKALSDGPNAVPLNKMEALLGTLVQLDRITKSS
                     AYLENDF"
BASE COUNT          604 a          739 c          642 g          598 t
ORIGIN      
        1 gctaagcccg tgggtgcgtc aactctacga tccgatacgt tttaaactga cccatcgagc
       61 catcatgcaa agtcaccggc agcacggccg gccctgcttt ctgctgccgt gaatcgggct
      121 ctggccatta agcgcttgta ctctagtcag tggaggctga agaagctgcc ccgttttcag
      181 tgccgggcag gatttggata aaaacctctt tatcctgcat cagaccaagc tggcgtctgg
      241 cgcgctcttc actggcctgc gtaccagaac gtaaatcgtc gacctcagcc tgcatggcct
      301 gattacgcgc tcgcaagcca tcattaatcg actgttgctc agcgacctct tcttgcaaat
      361 tccaggcagc aaaccaaccg ccctgaccca accacaacgg atattggatc aacacaaaca
      421 acaccagcag cgtcagaaaa atcagccgca tggcgctggc ccctagcgca ggttatagaa
      481 agcgtcacga ccaggataac tggcaacttc agccaactct tcctcgatgc gcaacagctg
      541 gttgtatttg gccatgcggt ctgaacgtga catcgagcct gttttgattt gcatggcgtt
      601 ggtggccaca gcaatgtcgg caatcgtaga gtcttcggtt tcacctgagc gatgtgagac
      661 taccgcggtg taaccagcgc gcttggccat ctcgatagca gcaaacgtct ctgacaatgt
      721 cccgatctga ttgattttga tgagaatcga attggcgata ttctgatcga taccttgttt
      781 gaggatttta gtgttggtca caaacaaatc gtcaccgacc aactgtactt tcttgcccaa
      841 ggtttcagtc agcactttcc agccatccca gtcattctca gacatgccgt cttcgatcga
      901 gatgatgggg tacttgtcgc accaggtggc caataagtta gcaaagtcgc tagacgacaa
      961 ggtcaagccg ccctcacctg ccaagtgata ttgaccatcg cgataaaact cagaagctgc
     1021 gcagtcaagt ccgagcgcca tttgcgtacc gggctcgtag ccggcgttct cgatcgcgcg
     1081 caagatcagt tcaatggccg cttcgtgatt ggtaacattg ggcgcaaaac caccctcgtc
     1141 accaacggca gtcgacattc cctgctcatc aattagcttc tttagcgcat gaaacgtctc
     1201 agcacccatg cgcaccgctt cacgaaatga tgttgcgccg atcggcagaa tcatgaactc
     1261 ctgcaaatca agcgagttat tggcatgtgc accgccatta atcacattca tcatgggaac
     1321 tggcatgctc atcggtgtgc tgccgccgaa atagcgataa agcgacaatc ctgattcttc
     1381 agccgcggcg cgggctaccg ccatgctaac ggacaaaatc gcattggcac caagcctagc
     1441 cttcgtctcg gtaccatcga gctcaatcat ggtgcggtcg atgaaggtct gctcctgtgc
     1501 atcgagaccc atgagtgctt cagagatgtc ggtgttgaca tgttgcaccg cattgagcac
     1561 gcctttaccg agaaagcgag ccttgtcgcc gtctcgcaac tcaatcgctt cgcgttcacc
     1621 ggtggaggca ccggacggca cagacgctcg acccatcgcg ccagactcaa gcaacacatc
     1681 acattcaacc gtgggattgc cacgcgagtc gatgatttcc cggccgatga tgtctacgat
     1741 tgcgctcatg tttttgtcct gataaaaaat gtcgattgtc ggaattcgtc gttaggtggg
     1801 tagttttggt tcgtgtgttt tggttcttgt atcttggttc gcgcgtgttc gatactgggt
     1861 gttaggtcat accaatgtgg cgcttgcccc tgttacagat gccctaaaag tcattttcca
     1921 gataagccga agatttggta attcgatcca attgcaccaa tgtaccaagc aatgcctcca
     1981 ttttattgag cggcactgcg ttaggtccat cagacagcgc tttggctggg tccgggtgac
     2041 tctccataaa gagccctgcc accccaacag ccacggcagc gcgcgccagt actggcacaa
     2101 actcacgctg ccctcccgaa ctcgtgccct gcccgccagg caattgaacc gagtgagtgg
     2161 cgtcaaacac caccgggcaa ccggtctgac gcatgatcgc aagcgaacgc atatcagaga
     2221 ccaggttgtg ataaccaaat gaagcgccgc gctcacaaac catgatttgc ggcgtcacac
     2281 cggcctcttg ggcagcgagt tcagctttgc gaaccacttg caccatgtct tcgggagcca
     2341 gaaactggcc ttttttaatg ttaactggct taccgcttgc ggcacacgct tgaatgaaat
     2401 cggtttggcg acacagaaac gccggtgtct gcaaaacgtc aactacttcg gccacgggtt
     2461 tgacctgtgc aatgtcatgc acatcggtca agatcggcac ctgcagcgtc tggcgaacat
     2521 cagccagaat ttgtaagccc tcagccatgc caagaccacg aaaggaactc gccgaactgc
     2581 ggt
//
LOCUS       DATBNL010000733         1811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_28597, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000733 DATBNL010000000
VERSION     DATBNL010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28597"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /gene="secB"
                     /locus_tag="VIC30_12390"
     CDS             <1..440
                     /gene="secB"
                     /locus_tag="VIC30_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA];
                     GO_process: GO:0050821 - protein stabilization [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEY7805214.1"
                     /translation="EQKAPAVEVNIGIGAQKLADTMFESTVTVTVTTKIEDKTVYLVE
                     ATQGGVFEVVNIPAEQIDALLGIVCPTMLYPYLRANVADAITRTTLPPLHLTDVNFQA
                     LYQQRQAEASAQAGEGNLPNGKAENGNAESASGIILPPGATKQ"
     gene            470..1516
                     /locus_tag="VIC30_12395"
     CDS             470..1516
                     /locus_tag="VIC30_12395"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012415942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEY7805215.1"
                     /translation="MTQTSNPPVTVLGAGAWGTALAAAACRQSDVVLWGRRESAMDDM
                     QRLHINERYLPGIELPKHLRFTADLQAALQHAGQSSAPGLLIIATPMAGLADTCQQIG
                     HWLVSGGHTVGNTIAGVIWTCKGLAHDTGLLPHEIVQTTLGDLPVARGVLSGPSFAKE
                     VARGLPVALTIASKDNNLRDVVTNVLHSDHMRIYSSCDVMGVEVGGALKNIMAIACGI
                     SDGLGLGDNARAALITRGLAEMTRFGVTLGAQTTTFAGLTGLGDLVLTATGDLSRNRQ
                     VGLRIGQGESLEQILAEGITAEGARCANAVLGRAQTLGISLPITEAVCDTLFGGVAPA
                     HAVARLMARSATEE"
     gene            complement(1570..>1811)
                     /locus_tag="VIC30_12400"
     CDS             complement(1570..>1811)
                     /locus_tag="VIC30_12400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005016760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEY7805216.1"
                     /translation="FAMTTRGKRLMSDVSFEPGDVFVFGRETAGLSDAQRALFAQQQW
                     IRLPMRAGQRSLNLSNTVAIVAYEAWRQQGYADGQ"
BASE COUNT          408 a          518 c          505 g          380 t
ORIGIN      
        1 tagagcaaaa agccccagcc gttgaggtca acatcggtat cggcgcacaa aaactcgctg
       61 acaccatgtt cgagtcgaca gtaacggtaa ccgtcactac taaaattgaa gacaaaacgg
      121 tttatctcgt ggaagccacc caaggtggtg tcttcgaagt ggtcaatatc cccgctgaac
      181 agatagacgc tttgctgggc atcgtctgcc caaccatgct ctatccgtat ttgcgtgcca
      241 acgtggctga cgccatcacg cgcacgacct tgccaccttt acacttgacc gatgtgaact
      301 tccaggcgct ctatcaacag cgtcaggctg aggctagtgc gcaagccggt gaaggcaacc
      361 tgcccaatgg aaaagccgag aatggcaatg ccgagagtgc ctcaggcatt atcttgccgc
      421 cgggcgccac aaagcaataa tccgttcaga gcacaggtcg cgccggacaa tgacccaaac
      481 atcaaaccca ccggtcaccg ttttgggggc aggtgcttgg ggtacggcgc ttgcggctgc
      541 agcatgccgt cagtctgatg tagtgctttg gggccggcga gagtcagcaa tggacgacat
      601 gcagcgcctg cacatcaacg agcgctatct gccgggcatt gaattgccca agcacctgcg
      661 ctttaccgct gaccttcaag cggccctaca acatgcaggc caatcatctg cgccgggcct
      721 gctgatcatc gccacgccca tggcaggttt ggctgacaca tgccaacaga ttggccattg
      781 gttagtcagt ggtggccaca cagtcggcaa cactatcgcc ggcgtcatat ggacttgcaa
      841 aggcttagcc cacgacaccg gtttgctgcc acatgagatc gttcagacaa cactcggtga
      901 tctacctgtt gcgcgaggtg tgctctcagg cccctcgttt gccaaagagg tggctcgtgg
      961 cttaccggtg gcgctgacga ttgccagtaa agacaacaac ttgcgagacg tggtcacaaa
     1021 tgttctgcat tctgaccaca tgcgcattta cagctcctgc gatgtgatgg gtgtcgaagt
     1081 cggtggagca cttaaaaaca tcatggccat cgcctgtggt atctccgatg gtctgggttt
     1141 aggcgacaac gcgcgagcgg ctctgattac acgtggtttg gcggaaatga cacgtttcgg
     1201 tgtcaccttg ggtgcacaga caaccacgtt tgctggtctc acgggtctag gtgatctggt
     1261 actcacggcc acaggcgatt tgtcacgtaa tcgccaagtg ggattgcgaa tcggtcaggg
     1321 ggagtcactg gagcagatcc tagccgaggg catcaccgct gaaggggcgc gctgcgccaa
     1381 tgcggtgctc ggacgcgccc agacgctggg tatcagcctg cccatcacag aagcggtttg
     1441 cgacacgctg ttcggtggtg tggcgcccgc ccatgcggtc gcacgtttga tggcacgctc
     1501 ggctaccgaa gaataattgc aacacgattg attgcgacat gattggttgc ggcgttattg
     1561 gtggcaactc tattgcccat cggcataacc ttgctggcgc cacgcctcat aagccacgat
     1621 ggccactgtg ttcgataaat tcagactgcg ctggccagca cgcatcggca aacgtatcca
     1681 ttgctgttgg gcaaacaagg cgcgctgcgc atcagacaac ccagctgtct cacgaccaaa
     1741 cacaaacaca tcgcctggct caaacgacac gtcactcatg agtcgtttgc cgcgtgtggt
     1801 catcgcaaac t
//
LOCUS       DATBNL010000734         4575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_78399, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000734 DATBNL010000000
VERSION     DATBNL010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4575
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78399"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..1413)
                     /locus_tag="VIC30_12405"
     CDS             complement(169..1413)
                     /locus_tag="VIC30_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006575986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805217.1"
                     /translation="MKTHTTHILDRLIRPKVKEAMLDTPVTLIEGPRQAGKTTLARQI
                     AHDEMRYLTLDDEATRTSVDQDPVGMIRQLDRAIIDEVQRAPALLLAIKKSVDEDRRP
                     GRFLLTGSANLMTLPTVADSLAGRMDTLTLLPLSQTEIYGGRQNWLDNAFKGHIVESN
                     HLRLGDDLVQSALKGGYPEAIERQTERRRMTWARQYMKSIIERDVREIANITILDELP
                     RFFSAVAQTAGQLCNYSQLAGQIGLDGKTAAKYIGVLEQLYLVKRIPVWANNQLNRIV
                     KTPKLQFVDSGLLASLLRMTSAEFETNRTRFGQLLETFVYGELLKHSVTADDDYIIMH
                     YRDHEQYEVDFVIENTMGDIIGVEVKAAASVRSTDKRGLKRLASLAADKFKLGVILYD
                     GDQTLPLNDNIWAVPISSLWAA"
     gene            1869..2246
                     /locus_tag="VIC30_12410"
     CDS             1869..2246
                     /locus_tag="VIC30_12410"
                     /inference="COORDINATES: protein motif:HMM:TIGR02683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY7805218.1"
                     /translation="MSLPIVKRQALEYQTVEGRSPFNDWICSLRDIRAKAKITRAVTQ
                     MEAGNFGDRKVISQGQGLYERRIHNGPGYRIYYICDHDHFIILFGGSDKGNQDQAIQA
                     AKSFLKDYRARQNAIGQATEGGA"
     gene            2312..2638
                     /locus_tag="VIC30_12415"
     CDS             2312..2638
                     /locus_tag="VIC30_12415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY7805219.1"
                     /translation="MALTREFKETVMQLCSDPQYRRALLLEALESYLEGEVAVGNALL
                     RDYLNGTQSFVAVSQALRMQESGLRRMLSANGNATAKNLFRLFRVCQQREGIVSSREF
                     LELACD"
     gene            3154..3591
                     /locus_tag="VIC30_12420"
     CDS             3154..3591
                     /locus_tag="VIC30_12420"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY7805220.1"
                     /translation="MKSDFRFVYNHRVRWVECDPQWIVFNGHYLTFFDVAVTEYARAV
                     GLPNVITQQKTGREFFARKSIIEYHAPAKYDDELQIHVRVAYLGNSSLKFVLEIFCND
                     ALVTSGEMIYVCVDSRARASTPLPDEWKQAVIDYEPMAVEQAG"
     gene            3673..>4575
                     /locus_tag="VIC30_12425"
     CDS             3673..>4575
                     /locus_tag="VIC30_12425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009519555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY7805221.1"
                     /translation="MKLLVTGAAGFLGRELTRALLAQSQFNGQAIASIMLTDQVAVTD
                     TVALDDRRVQVHQGDLLDSLPELFESVYDAVFHLASAVSAECEDDFSLGLRANLATTE
                     ALLEQLRTQHTETGVVATLFFASSVAVFGGDAGVPLPDVVTDTTLPVPQSSYGVHKFV
                     CEQLIADYTRKGLIDGRVARLMTVSVRPGRPNGAASSFLSGIIREPLAGEPAICPVDP
                     DTRVALASPGNTIAGILRVAQATRQELAGRTAINLPALSLSVADMLASLEDIAGPQTR
                     ALVTIEEDDAIGAVVGGWPGAFKTD"
BASE COUNT         1046 a         1135 c         1231 g         1163 t
ORIGIN      
        1 gggcggactg ctccgaattt acgcttgggg agatcgcggt aagtcgcggc gctggaaaca
       61 gtgcggtgct cagatcgatg aaccaagaaa cccccacctc aagcgccata ggcgcatgag
      121 gtgggggagt gtcatcaagt agccagagct gatcaagccg gtgcttaatt aagctgccca
      181 aagcgatgag attggcaccg cccagatatt gtcgttcaat ggcagcgttt gatctccatc
      241 gtagagaatc acgccgagct tgaatttgtc ggcagccaaa gatgcgagcc gtttgagacc
      301 gcgcttgtcg gtagatctga ccgaggcagc tgctttgacc tcgacgccaa tgatgtcgcc
      361 catcgtattt tcaataacaa aatcaacttc gtattgttcg tgatctcgat agtgcatgat
      421 gatgtagtca tcgtcagcgg tgacgctgtg tttaagcagt tcgccataca caaatgtttc
      481 tagcaattgc ccaaaacgcg ttcggttggt ttcaaattcg gcgctagtca ttcgcaacaa
      541 ggaggctagc aggcctgaat ccacgaattg cagttttggg gttttaacta tccggttgag
      601 ttgattgtta gcccaaacag gaattcgttt gacgaggtag agttgttcga gcacgccaat
      661 gtatttggca gctgttttac cgtcaaggcc aatctggccg gcgagttggc tgtaattgca
      721 taactgcccc gcagtttgag ccacggcact aaaaaaccta ggcaattcat cgaggatggt
      781 gatgttggct atttcccgaa catctcgttc tatgatcgat ttcatgtact gccgtgccca
      841 tgtcatccgt ctgcgctcag tctgtctttc tatggcttct ggatagccac ctttgagtgc
      901 gctttgcact aaatcatcac caaggcgcaa gtgattgctt tctacgatat gtcctttgaa
      961 agcattgtcc agccagttct gacgtccccc gtaaatctcg gtttgagaca aaggcaatag
     1021 cgttagtgtg tccatacggc cagctaggga atcagccacc gttggaagag tcatcaggtt
     1081 ggcagagccg gttaataaaa atctccctgg tcgacggtct tcgtcaacgc tcttttttat
     1141 agctagcaac agagctggtg cacgctggac ctcgtcaatg atggcgcggt ctaactgtcg
     1201 aatcatgccg acagggtctt gatctacaga tgtgcgggtt gcctcgtcat ctagcgtgag
     1261 gtagcgcatt tcatcatggg cgatttgacg agcgagcgtg gttttgccgg cctggcgcgg
     1321 tccttcgatc aaagtaacgg gcgtgtcgag cattgcctcc ttaacttttg gcctgatgag
     1381 tcgatccaga atgtgcgtgg tgtgagtttt cattcttcta ttttactgaa atttcggatt
     1441 aggaatacaa aaatatcgga atgaatagtc agataatccg gaattttctg tcagtatcgg
     1501 ggaaaaaagc gttggctcca actaccggca acgacaacaa gccaccactg ctcagcatgg
     1561 cataaaaaac tgacatacag ggctacacct gtgcttacat cctcgtccta acgaacgggg
     1621 ctttacgcgc tggatgggta accttgagtc gtgcaggaca gcacaggaag tactgcttca
     1681 cggccgccag cgcctatggc aaaacgcact agcctcatca aaactgaccg ctaaagtgac
     1741 tcacaatctg tcgttcggtt tgtcagccaa agaatttcaa aacctcacgc ctttatttct
     1801 ggatgggttt gggtcgaaat cacacagcgc aaatcataac gtatatgtta ttatgtgggg
     1861 agtgttctgt gtcattgcca attgtcaagc gccaagcgtt ggaatatcaa acagtcgagg
     1921 gccggtcgcc ttttaacgat tggatttgta gcctgcgtga cattcgagcc aaagcgaaga
     1981 taactcgggc agtcacgcaa atggaggcgg gcaacttcgg ggatcggaag gtcatttcgc
     2041 agggccaagg cttgtatgag cgcaggattc ataacggtcc tgggtatcgc atctactaca
     2101 tttgcgacca tgaccatttc atcattttgt ttggcggtag tgataaaggc aatcaagacc
     2161 aagccataca agcggcgaag tcgttcctca aggactacag agcacgccag aacgcgatag
     2221 gtcaagccac cgaaggcgga gcatgaaact cagtcacatg caaccacgtc acatgcaagc
     2281 gcacatctcc gtgtgcaaag gggtagatac gatggcacta acacgtgaat ttaaagagac
     2341 cgttatgcag ttgtgttcgg atcctcaata tcgcagggca ttattgcttg aagcgcttga
     2401 gtcttatctg gaaggcgagg tggctgtggg caacgcgttg ttgcgtgact acctcaatgg
     2461 tacccagtcc tttgtggctg tttctcaagc actgcgaatg caagagtcgg gattgcgtcg
     2521 catgttgagc gccaacggca acgccacggc caagaacctg tttcgtctat ttcgggtgtg
     2581 tcaacaacgc gaagggattg tgtcatcgcg ggagtttctt gagctggcgt gtgattgacg
     2641 gacgacacgg ctacctaaga cgaacggcgg atgggtagat acgagcacca tttcccaagc
     2701 cgaccactag atctcatttt tctatattta atccttttct tgttttttat gagtaatcct
     2761 tggttttacc ttgtcaatcc ggagttagga tcctaaaaaa actaggtttg agagagattt
     2821 atacgcgcag ggtttagagg cgctaaccca tgcgccagca gtggtgttgc ttggtacacg
     2881 cccggtgggt aaaacaaccg ttgccatagc catcggtcgt gagattgccg cggtttatct
     2941 tggcctcgaa gccgttgtta gaaatctgat catttttcgt ttcacctagg aacgtcttcg
     3001 ctggctttgg accatgatgg atttgctacc gctacgtcgc ttgctcgatc gactcgtgag
     3061 tctctaaatc gcaatcaacc tgactgatcg cccacaagcg ttaagatgaa ccacttggtt
     3121 tttttcagtt cagtcatcct tgtgagtgtt gccatgaagt ctgatttccg ctttgtctat
     3181 aaccaccggg tgcgttgggt tgagtgcgat ccgcagtgga tcgtgtttaa cggccactac
     3241 ctgacattct ttgatgtggc tgtcaccgaa tacgcccgcg ccgtggggct gcccaacgtc
     3301 atcactcaac aaaaaactgg cagggagttt tttgcgcgca agtccatcat cgaataccac
     3361 gcaccggcca agtacgacga tgagttgcag atccatgttc gggtggcgta tctcgggaat
     3421 tcgagcctga agtttgtgct ggagatcttc tgtaacgacg cattggtaac cagtggtgag
     3481 atgatttatg tgtgtgtaga cagtcgcgcg cgtgccagca ccccattgcc cgatgagtgg
     3541 aagcaagccg tgattgacta tgagcccatg gctgttgagc aggcaggcta aaattcctca
     3601 tgtaagtgcc cattaaattt ctgatcgaat ttctcatcaa atttcgcaac aactgtctgg
     3661 agtgcttagg caatgaaact gctcgtgacc ggcgcggccg ggttcttggg gcgtgagctc
     3721 acccgtgcct tgttggcgca atctcagttc aacggccaag ccattgcctc gatcatgctc
     3781 acagaccagg tcgctgtgac cgatacggtg gcgcttgatg atcgccgtgt gcaagtgcac
     3841 caaggtgatt tgctcgatag cctgcctgaa ttgtttgagt cggtctatga cgcggtgttt
     3901 catctggctt ctgcggtgtc agccgaatgc gaggacgact tctcactcgg cttgcgcgcc
     3961 aatctcgcca ccaccgaagc actgcttgaa caactgcgca ctcagcacac cgagaccggt
     4021 gtggtggcga cgttattttt tgcgagctcg gtggcggtgt ttggcggtga cgccggtgta
     4081 ccactgcctg atgtcgttac cgacaccacc ttgccggtgc cgcaatccag ttatggggtg
     4141 cacaagtttg tgtgtgagca actgattgct gactacaccc gtaaagggct tatcgatggt
     4201 cgggtagcca ggctcatgac ggtgtcagtg cgacccggac gtcccaatgg tgcggcgtcg
     4261 agttttttgt cgggcattat tcgcgaacca ttggccggag aacccgccat ttgcccagtt
     4321 gaccccgata cccgtgtggc actggcttca ccgggcaaca ccattgccgg catcttacga
     4381 gtagcccaag ccacgcgtca agaattggcc ggtcgcacag ccattaacct gccggcgtta
     4441 agcttatcgg tagccgacat gttggcctca ctcgaagaca tcgctgggcc acaaacccga
     4501 gccttggtca cgatcgaaga agacgacgcc atcggtgccg tggtgggagg ttggcccggt
     4561 gcctttaaga ccgac
//
LOCUS       DATBNL010000735         2329 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_177903, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000735 DATBNL010000000
VERSION     DATBNL010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177903"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VIC30_12430"
     CDS             <1..375
                     /locus_tag="VIC30_12430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805222.1"
                     /translation="SVCSFTRVTPRSRPIQSVQNIMKIIIILAVILGGLYFYPQINED
                     TSSTCGALEKRFVRDAFSGQDGGDVFSALLSSGASNGALAASMVKTASPNLPAALGCV
                     QIYYELMFDPEMAKRAIDEDVK"
     gene            372..791
                     /gene="arfB"
                     /locus_tag="VIC30_12435"
     CDS             372..791
                     /gene="arfB"
                     /locus_tag="VIC30_12435"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011884080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEY7805223.1"
                     /translation="MSPLKFYVNVDEVQMTAIRAQGPGGQNVNKVANAVHLRFDIAAS
                     SLPAAIKQRLMDLSDHHVGRDGVVVIKAQKFRSLPKNQEDALRRLNALVARAAIVPKA
                     RRATRPTKASIERRLQEKSRRSSLKSHRSSGRGSLAD"
     gene            complement(807..1976)
                     /locus_tag="VIC30_12440"
     CDS             complement(807..1976)
                     /locus_tag="VIC30_12440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019426057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEY7805224.1"
                     /translation="MKIAIAGTGYVGLSNAVLLSQHNEVVALDIDPDKVALINERHSP
                     IEDAELEHYLQTKNLNLRATLDKHDAYDGADYVIIATPTDYDPQTNYFNTGSVESVIR
                     DVSSINPSAVMIIKSTIPVGFTLRVRQELNTEQVIFSPEFLREGKALHDNLYPSRIVV
                     GEDSARAHRFAQLLEQGALKTDIPVLFTGSTEAEAIKLFANTYLAMRVAYFNELDTYA
                     ASHGLNTREIIDGVCLDPRIGSHYNNPSFGYGGYCLPKDTKQMLANYQDIPQNLINAI
                     VDANSTRKDFVAFDILKRNPRVVGIYRLVMKAGSDNFRSSSIQGIMKRLKAKGVEVIV
                     YEPVLEESEFYRSRVITDFEAFKREADVIVANRITDDIRDVAHKVYSRDLFGSDS"
     gene            2088..>2329
                     /locus_tag="VIC30_12445"
     CDS             2088..>2329
                     /locus_tag="VIC30_12445"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018714411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051499 - D-aminoacyl-tRNA deacylase
                     activity [Evidence IEA];
                     GO_process: GO:0006399 - tRNA metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HEY7805225.1"
                     /translation="MQALLQRVSQASVCIDAQLTGEIGQGLLVLLCAEQGDTEETGKK
                     LLEKILKLRLFADTNDKMNLSVLDINGALLIVSQFTL"
BASE COUNT          564 a          551 c          628 g          586 t
ORIGIN      
        1 agcgtgtgca gcttcacacg tgtaactcca cgttcacgtc caatacaaag tgttcaaaac
       61 atcatgaaaa tcatcatcat tcttgctgtc attctgggcg gcctttactt ttatccgcag
      121 attaacgagg acaccagttc cacctgtggc gcactcgaaa agcgctttgt acgggacgcg
      181 tttagcggtc aagacggcgg tgatgttttt tccgcattgt tgtcgtctgg tgcttctaat
      241 ggggcacttg ccgcttcgat ggttaagaca gcatcaccga acttgccagc agcgcttggt
      301 tgcgtgcaaa tctattatga gctgatgttc gatcctgaga tggccaaacg agccatcgat
      361 gaggatgtaa agtgagccca ctcaagtttt atgtcaacgt cgacgaagtg caaatgacgg
      421 cgattcgggc gcaaggcccg ggtgggcaaa acgtcaacaa agttgccaat gcagtgcact
      481 tgcgtttcga cattgcagcg tcgagcttgc cggctgccat taagcaaaga ctgatggatt
      541 tgtcagatca tcacgtcggg cgagacgggg tggtggttat taaggcccag aagtttcgta
      601 gtctgcctaa aaaccaagaa gacgcactgc gccgcctaaa tgccttggtc gcacgcgcgg
      661 ccatcgtgcc gaaagccagg cgtgccaccc gtcctaccaa ggcttcgatt gagcggcggt
      721 tgcaagagaa gtctcgtcgc agtagcttga aatcccatcg atcttcagga cgtggttcac
      781 ttgctgacta gccgcaagcg cgacgcttag ctgtcgctgc caaacaagtc gcggctatac
      841 actttgtgtg caacatcgcg aatgtcgtct gtgatgcgat tggccacgat gacatccgct
      901 tcgcgcttga atgcctcgaa atcagttatg actctagagc ggtaaaactc gctttcttcc
      961 agaaccggct catagacgat gacctcaaca cctttggctt tcaggcgctt catgatgccc
     1021 tgaatagaac tcgaccgaaa attatctgaa ccggccttca ttaccagacg ataaatgcct
     1081 acaaccctcg ggttgcgttt caagatatcg aaagcgacga aatctttgcg tgtgctattg
     1141 gcatcaacaa tggcgttaat gaggttttgt gggatgtcct gataattggc cagcatttgt
     1201 ttggtgtctt tgggcaggca gtagccccca taaccaaatg agggattgtt gtaatggctg
     1261 ccgatacgcg gatcaaggca aacgccatcg atgatttccc gcgtgtttaa gccgtgtgaa
     1321 gcggcatagg tgtcgagttc gttgaagtaa gccacacgca tggctaggta tgtgttggca
     1381 aaaagcttga tggcctcagc ctccgtgctg ccagtaaata ggaccggtat gtcggttttt
     1441 aatgcgcctt gctctaaaag ttgcgcaaag cgatgggccc gcgcgctgtc ttcaccgacg
     1501 acgatacggc ttggatacag attgtcatgt agtgcttttc cttcacgcaa aaactctggt
     1561 gaaaaaatga cttgttcggt gtttagctct tgccgcacac gcaacgtaaa tccgactgga
     1621 atggtcgact tgatgatcat caccgctgac gggttgatcg atgagacatc acgaatcacg
     1681 gattcgactg aacccgtgtt gaagtagttg gtctgtgggt cgtagtcggt gggcgtggcg
     1741 ataatcacat agtcagcacc gtcatacgcg tcgtgcttat cgagcgtggc gcgtaggtta
     1801 agatttttgg tctgcaggta gtgctcaagt tcagcatctt cgatcggaga gtggcgctca
     1861 ttgataagcg cgactttatc agggtcaata tcgagtgcga caacttcgtt gtgttgtgac
     1921 aacaacacgg cgttggacaa tccgacgtag ccggtaccgg caatggctat tttcatgatg
     1981 ataaaaagtg atttcagatg gattcgaaag ggcttgccta cataagccca tggatgacca
     2041 agtttagcgt agtgttttga acaaacggtg aaacaaggag ttgggggatg caagctttgt
     2101 tgcaacgagt cagtcaggcc agtgtgtgca ttgacgctca gctcacagga gagatcggac
     2161 aagggttgct cgtattgctc tgcgccgaac aaggcgacac cgaggaaacc ggtaaaaaac
     2221 tattggaaaa aattctcaaa ctgcgcctct ttgctgacac caacgacaag atgaacctgt
     2281 ctgtgctcga tatcaatggg gcgttgttga ttgtgtcgca gttcacgct
//
LOCUS       DATBNL010000736         1989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_98417, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000736 DATBNL010000000
VERSION     DATBNL010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98417"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VIC30_12450"
     CDS             complement(<1..646)
                     /locus_tag="VIC30_12450"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000940.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEY7805226.1"
                     /translation="MTQASNPPVTVLGAGAWGTALAAAACRQSDVVLWGRRESAMADM
                     QRLHINERYLPGIELPKHLRFTADLQAALQHAGQSSAPGLLIIATPMAGLADTCQQIG
                     RWLVSGGHTVGNTIAGVIWTCKGLAHDTGLLPHELVQTALGDLPVPRGVLSGPSFAKE
                     VARGLPVALTIASEDNNLRDVVTDVLHSDHMRIYSSCDVMGVEVGGALKNIMAIA"
     gene            complement(688..1233)
                     /gene="secB"
                     /locus_tag="VIC30_12455"
     CDS             complement(688..1233)
                     /gene="secB"
                     /locus_tag="VIC30_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEY7805227.1"
                     /translation="MADENTAASENPTFNLQRAYLKDLSLEVPNAPHVFLEQKAPAVE
                     VNIGIGAQKLADTMFESTVTVTVTTKIEDKTVYLVEATQGGVFEVVNIPAEQIDALLG
                     IVCPTMLYPYLRANVADAITRTTLPPLHLTDVNFQALYQQRQAEAGEQAGEGNLPNGK
                     AESGKGDGASGIILPPGATKQ"
     gene            complement(1273..1539)
                     /gene="grxC"
                     /locus_tag="VIC30_12460"
     CDS             complement(1273..1539)
                     /gene="grxC"
                     /locus_tag="VIC30_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007179466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEY7805228.1"
                     /translation="MNKVVMYTTGYCPFCTRAEALLNKRGVNEIEKIRIDMDPEQRSA
                     MMTLTNRRTVPQIFIGQTHVGGYDDLAALDRDGGLVPLLEGASQ"
     gene            complement(1653..>1989)
                     /locus_tag="VIC30_12465"
     CDS             complement(1653..>1989)
                     /locus_tag="VIC30_12465"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY7805229.1"
                     /translation="IQRGRAGGSVSTTQAVQLINHEDAIIVDVRPMGTFQQGHIAHSR
                     NIPLAEIADKAAKLPKDKPILVTCDRGQIAVGGAAKLRKAGLERVMVLEGGINAWTQA
                     GLPTTTKKK"
BASE COUNT          380 a          535 c          575 g          499 t
ORIGIN      
        1 aggcgatggc catgatgttt ttaagtgccc cgccgacctc gacgcccatt acatcgcagg
       61 agctgtagat gcgcatgtgg tcagaatgca aaacgtctgt caccacgtct cgcaagttgt
      121 tgtcttcact ggcaatggtc agcgccaccg gtaagccacg agccacctct ttggcaaacg
      181 aggggcctga gagcacgcct cgcgggacag gcagatcacc gagtgccgtc tgaacgagtt
      241 catgcggcag caaaccggtg tcgtgggcta agcctttgca tgtccatatg acgccggcga
      301 ttgtgttgcc gacggtgtgg ccaccactga ctaaccaacg gccaatctgt tggcatgtgt
      361 cggccaaacc tgccatgggc gtggcaatga tcagcaggcc cggcgcagat gattgccctg
      421 cgtgttgcag ggctgcctga aggtcagcgg tgaaacgcaa gtgcttgggc aattcaatgc
      481 ccggcaggta gcgctcgttg atgtgcaggc gctgcatgtc ggccattgct gactcgcgcc
      541 tgccccaaag caccacatca gactgacggc atgctgcagc cgcaagcgca gtgccccaag
      601 cgcctgcccc caaaacggtg accggtgggt ttgatgcctg ggtcattgcc tggtccatgg
      661 cattgagcga cctgtgctct gactggatta ttgctttgtg gcgcccggcg gcaagataat
      721 gcccgaggca ccatcgcctt taccactctc cgctttacca ttgggcaggt tgccttcacc
      781 agcttgctca cctgcttctg cctgacgctg ttgataaagc gcctggaagt tcacatcggt
      841 caagtgcaaa ggaggcaagg tcgtgcgcgt gatggcgtca gccacgttgg cacgcaaata
      901 cggatagagc atggttgggc aaacaatgcc cagcaaggcg tctatctgtt cagcggggat
      961 attgacgact tcgaatacac caccttgggt agcttccacg agataaaccg ttttgtcttc
     1021 aattttagta gtgacggtta ccgttactgt cgactcgaac atggtgtcag cgagtttctg
     1081 tgcgccgata ccgatgttga cttcaacggc tggggctttt tgctctaaaa acacgtgagg
     1141 tgcgttaggc acttcgagcg acaaatcttt tagataagcg cgctgcaggt taaaggttgg
     1201 gttctcactt gctgctgtgt tttcgtcggc cataaaaatt ccaattaggt gttgtcatac
     1261 gggcagcgcg ttttactggc tggccccttc tagcagcggt acaagaccgc catcgcggtc
     1321 aagtgccgca agatcatcat aaccgcccac gtgtgtctgc ccgatgaaga tttgcggcac
     1381 ggtgcgccga ttggtcagtg tcatcatcgc tgagcgttgt tcggggtcca tgtcgatgcg
     1441 gattttttca atttcgttga ccccccgttt gtttagcaat gcctctgctc gcgtgcaaaa
     1501 cgggcaatat ccggtggtgt acatcacgac tttattcatt gtgtcccctt tggtttttcg
     1561 gttgctgtgc ttctgttgct gtgcttcggt tgctctgctt ggctggcatt gcttgaatcg
     1621 cagtgcctgg gctgccgcac agcttgatgg ttttattttt tcttggtggt ggttggcaaa
     1681 ccggcttggg tccaggcatt gataccgcct tcgagcacca tgacgcgctc gagcccggct
     1741 ttacgtagtt tggccgcgcc cccgacggcg atctggcctc tgtcgcacgt caccaaaatg
     1801 ggcttgtctt tgggcagttt ggcagctttg tcagcaatct cggccaacgg gatgttgcgc
     1861 gagtgtgcaa tgtgaccttg ctggaaggtg cccatgggac gcacgtcaac aataatggcg
     1921 tcttcgtgat taatcagttg cacggcttgg gtggtagaga cactaccacc ggcgcgtcca
     1981 cgttgaatg
//
LOCUS       DATBNL010000737         1760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_68968, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000737 DATBNL010000000
VERSION     DATBNL010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68968"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VIC30_12470"
     CDS             <1..446
                     /locus_tag="VIC30_12470"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY7805230.1"
                     /translation="PVLTLALAHGKNFGAGVDLMAVCKHRVASEDATFRMPGLKFGLV
                     LGTRRLARLVGVQTARQIQQVAKTLNASEAHTVGLVSALAEPQAWPHVIEQQGDIAAS
                     LTPSARASLYRVLDENTDAQDMADLVRSVTEPGLKDRIAKYLAAR"
     gene            476..1060
                     /locus_tag="VIC30_12475"
     CDS             476..1060
                     /locus_tag="VIC30_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011301159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase"
                     /protein_id="HEY7805231.1"
                     /translation="MNQTPSAQPQALQQFVSKLDALVAAGGESQPDFWSRLGDAMREL
                     VAKDDWLPDAMAVPHPQFYQQYCLYADPQDRFSVVSFVWGPGQATPIHDHTVWGVIGM
                     LRGAEVCQAFEPDAVSAPKATGELERLEPGQVGFVAPSIGDVHRVANAYDDRVSISIH
                     AYGGNIGKINRRVFPQEGGPAKSFISGYSEPVEA"
     gene            1057..>1760
                     /locus_tag="VIC30_12480"
     CDS             1057..>1760
                     /locus_tag="VIC30_12480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805232.1"
                     /translation="MNDLSSLHTAPEHDTPIAYMARTRQWYLALGYDNPYQWAHYTDV
                     PFTRLAKPLSQSVVGLITTASPFEPDKGEQGPGAPYNARAKFYEVYSGDTREDHDLRI
                     AHVAIDRAHTSMTDSGSWFPLPALREIAQTGKIGRLADRFHGAPTNRSQRHTLSVDCP
                     ELLARCQADGVDAMVLVANCPVCHQTLSLVARYLEAHGIATVILGCAKDIVEHCGVPR
                     FVFSDFPLGNAAGKPH"
BASE COUNT          362 a          485 c          527 g          386 t
ORIGIN      
        1 tgccggtgct gacgttggct ttggcgcatg gcaagaactt tggggccggt gttgatttaa
       61 tggcggtgtg caaacatcga gtggcttctg aagatgcgac atttcgcatg ccagggttga
      121 agttcggttt ggtgttgggc acacgtcgtt tggctaggtt agttggtgtg caaaccgcgc
      181 gccagattca acaagtcgct aagacactaa atgcgagcga ggctcacacc gttggcttgg
      241 tctcagcgtt ggccgagccc caggcttggc ctcacgtcat cgagcagcaa ggcgacatcg
      301 cggcatctct gacaccgagt gcccgggcat cgctgtatcg agttctagat gagaacaccg
      361 atgcccaaga catggccgac ctggtgcgtt cggtcaccga gccgggactc aaggaccgga
      421 ttgctaaata ccttgccgca cgctaaggtc agggaaccat tgcaggagat caatcatgaa
      481 tcagacgccg tcagcgcaac cccaagcgtt gcaacaattc gtctctaaac tcgatgcgct
      541 cgtggccgcc ggcggcgagt cacagcccga tttctggtcg aggcttggcg atgcgatgcg
      601 cgagttggta gccaaagacg actggctacc tgatgccatg gcagtgccac atccgcagtt
      661 ctaccaacag tattgcctat acgctgatcc gcaagaccgc ttctcggtgg tgagttttgt
      721 gtgggggcca ggccaagcca cgccgattca tgatcacacg gtctggggtg tgattggcat
      781 gttgcgtggt gccgaggtct gtcaggcgtt tgaacccgat gccgtatctg ctcccaaggc
      841 cacaggtgag ctcgagcggt tggagcctgg gcaggtcggg tttgtcgcac cgtctattgg
      901 agacgtgcat cgtgtggcca atgcatacga cgatcgcgtc tcgattagca ttcacgccta
      961 tggcggcaac attggcaaga tcaatcgccg cgtgtttcca caagagggtg ggccagctaa
     1021 gtcctttatc tctggctaca gtgagcctgt agaggcatga acgatctgtc gagtcttcac
     1081 actgcgcctg agcatgacac accgattgcc tacatggcac gcacgcgcca gtggtacttg
     1141 gcacttggct atgacaatcc gtatcagtgg gcgcactaca ccgatgtgcc atttacccgg
     1201 ttagccaagc cgttatcgca atcggtggtg ggtttaatca ccacggcttc accattcgag
     1261 cccgacaaag gtgagcaggg gccaggtgcg ccgtataacg cacgcgccaa gttctacgag
     1321 gtctattcgg gtgacacccg cgaggaccat gacctgcgca tcgcgcacgt ggccatcgat
     1381 cgcgcacaca ccagcatgac tgactctggt agctggtttc cgttgccagc gttacgtgaa
     1441 atagcgcaga caggaaaaat cgggcggcta gctgaccgat ttcatggcgc accaaccaac
     1501 cgcagtcagc gccatacctt gagcgttgac tgcccagaat tattggcgcg gtgccaagcc
     1561 gatggtgttg atgccatggt gctcgtggcc aattgcccag tgtgtcatca gacgctaagc
     1621 ctcgtggcgc gttaccttga agcccatggc attgccacgg tgatactcgg ttgtgccaaa
     1681 gacatcgtgg agcattgtgg ggtgccgcgg ttcgtgttta gcgacttccc gcttggcaat
     1741 gccgccggta aaccgcatga
//
LOCUS       DATBNL010000738         4172 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_58832, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000738 DATBNL010000000
VERSION     DATBNL010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4172
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58832"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..862
                     /locus_tag="VIC30_12485"
     CDS             <1..862
                     /locus_tag="VIC30_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase subunit alpha"
                     /protein_id="HEY7805233.1"
                     /translation="ERSKPAIEQGEKVSFIVPVRNRNRSVGAMLSGEIARRHGADGLA
                     DDAIHIQFNGSAGQSFGAFLVSGVTFDLVGEGNDYVGKGLAGGRIIVRSPNDFRGFGP
                     EHIIVGNTVLYGATMGEAYLSGVAGERFAVRNSGAAAVIEGTGDHGCEYMTGGTVVVL
                     GDTGRNFAAGMSGGVAYVFDPERQFKDCCNHAMVDLEPVLTTAEQKSKVGMETWHSML
                     RGDDRETDEAILKRLIENHFRYTGSFRARDILSNWPASRGMFVKVMPKEYRRALAELW
                     QGANTASKAA"
     gene            876..2342
                     /locus_tag="VIC30_12490"
     CDS             876..2342
                     /locus_tag="VIC30_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEY7805234.1"
                     /translation="MGKATGFLELKRLKEASQAPEVRIKHWSEFVDRLTDEDASKQGA
                     RCMDCGIPFCNTGCPVNNIIPDWNDLVYRNQWQEALSVLHSTNNFPEFTGRICPAPCE
                     AACTLNINNDPVGIKSIEHAIIDKGWEEGWVVPQPPTQRTGKKVAVIGSGPAGLAAAQ
                     QLARVGHDVTVFEKQDRIGGLLRYGIPDFKMEKHLIDQRVMQMQAEGVTFSPSTYIGS
                     PEDPWAKGLTVKTPAELDAEFDAVVLSGGCEVPRDLPVPGRELDGVMYAMDFLRPQNK
                     VVAGDKISGQVLAKDKHVVVIGGGDTGSDCVGTSNRHGAKSVTQIELMPKPPEHENKE
                     MTWPYWPAKLRTSSSHEEGAERDWAITTKAVEGVDGKVTKLIAARVQWERDEATGQFK
                     MQEVPGSEFEIQADLILLAMGFVSPIAGVLKAFGVELDPRGNVRANTDDYQTTLPKVF
                     AAGDMRRGQSLVVWAIREGRQCARAVDEYLMGATELPR"
     gene            2370..3224
                     /locus_tag="VIC30_12495"
     CDS             2370..3224
                     /locus_tag="VIC30_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006216849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7805235.1"
                     /translation="MTASTDSSDTSTSTASSPVLEFDNVTLGYGDFTVLNGLSLTAKA
                     GEVVAVMGGSGSGKTTLMRAATGQIGVMDGELKTFGQSMRHLGRVELQALRQRMGVLF
                     QHGALFTDLDVFENVAFPLREHTRLDESEVALKVLQNLDAVGLKAAAHLKLSEVSGGM
                     ARRVALARAIVREPELVFYDEPFAGLDPISMGIAARLIRRLSDKLGCASVVITHDVPE
                     TFEIADTVYIVGQGELKASGSPDTLTESDDPYVRQFLEGAPDGPVAFDYPQTPAFERW
                     CRDKGVEP"
     gene            3230..4006
                     /gene="mlaE"
                     /locus_tag="VIC30_12500"
     CDS             3230..4006
                     /gene="mlaE"
                     /locus_tag="VIC30_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEY7805236.1"
                     /translation="MNTLAGIGAFTRRQLVVLGQLARFFTQLLMRCGVIFHRPRLTVQ
                     QVHFIGNYSLIIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLTRELGPVVT
                     ALLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPIRRVLAPRFLGGVIAMPILAAVF
                     SMVGIIGGWVVGVVLIGIDSGAFWSQMQDGVDVFKDVLNGVIKSVVFGVAVTLIALFE
                     GWQCKPTPEGVSRATTRTVVAGSLVVLGLDFVLTALMFSN"
     gene            4024..>4172
                     /locus_tag="VIC30_12505"
     CDS             4024..>4172
                     /locus_tag="VIC30_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009455494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEY7805237.1"
                     /translation="MSNHKIDVWVGLFVLLGIIALVFLALRAGNLSSFSFAETYAVQA
                     KFDNLG"
BASE COUNT          850 a          991 c         1306 g         1025 t
ORIGIN      
        1 cgagcgtagc aagcctgcca tcgagcaagg agagaaagtc tcctttatcg tgccggtgcg
       61 caaccgcaat cgcagcgtgg gcgccatgct gtcaggtgag atcgcgcgtc gccatggcgc
      121 cgatggctta gccgatgatg ctattcatat tcagttcaat ggcagcgccg gacaaagctt
      181 tggggcgttt ttggtcagtg gtgtgacctt tgacctcgtt ggcgaaggca atgattatgt
      241 tggcaaaggt ctggctggcg ggcgcattat tgtccgcagc cctaacgact ttagaggctt
      301 tgggcctgaa cacattattg ttggtaacac cgttctctac ggtgccacga tgggtgaggc
      361 ttacttgagc ggcgtggcgg gagagcgatt tgcggttcgt aactcgggtg ctgccgctgt
      421 gattgaaggc actggtgacc atggttgtga atacatgacc gggggtacgg tggtggtgct
      481 tggtgataca ggacgtaact ttgccgctgg tatgtctggt ggcgtggcgt acgtctttga
      541 tccagagcgc cagtttaaag actgctgcaa ccatgcaatg gttgatttgg agcccgtcct
      601 cacgacagct gagcaaaaga gcaaggttgg tatggagaca tggcacagca tgttgcgtgg
      661 cgatgaccgt gaaaccgatg aggccatcct caaacggtta atcgagaacc atttccgtta
      721 tacaggtagt ttccgtgcgc gcgacatact aagtaactgg ccagcttcgc gcggcatgtt
      781 tgtcaaagta atgcccaaag agtatcggcg cgcattggct gagctctggc aaggtgctaa
      841 cacggcctcc aaggccgctt gatggggggt tagacatggg taaggcaaca ggatttttag
      901 agttaaagcg cttgaaagag gccagtcagg cccctgaggt tcgtatcaag cattggagcg
      961 aatttgtcga tcgcttgacc gacgaggacg caagcaagca aggtgcgcgg tgcatggact
     1021 gtggcattcc gttttgtaat acgggttgcc cggtcaacaa cattattccg gactggaatg
     1081 acctggtgta tcgcaaccaa tggcaagaag cgctcagcgt gctgcattcg accaacaact
     1141 ttccggagtt cacgggtcga atctgtccag caccgtgcga ggcagcctgt acgttgaaca
     1201 tcaacaacga cccagtgggt atcaagtcga ttgagcacgc catcatcgac aagggctggg
     1261 aagaaggttg ggttgtgcct cagccaccaa cacagcgtac cggcaagaaa gtggccgtga
     1321 tcggctctgg cccagctggg ctggctgccg cgcagcaact cgcgcgcgtc ggacatgatg
     1381 tgacggtgtt tgagaagcaa gatcgcattg gtggtctgtt gcgctatggc atccctgact
     1441 tcaagatgga aaagcacctg attgatcagc gtgtgatgca aatgcaagct gaaggcgtga
     1501 ctttcagccc atcgacctac atcggttcgc ctgaggaccc ttgggccaag ggtctgacgg
     1561 ttaaaacacc ggccgaactt gatgctgagt ttgacgctgt ggtgctctct ggtggttgtg
     1621 aagtgccacg tgacctacca gtgccaggtc gtgagcttga tggcgtgatg tacgccatgg
     1681 atttcttgcg tccacaaaat aaagtggtgg ctggtgacaa gatctccggt caggtgctgg
     1741 ccaaagacaa gcatgtggtc gtcatcggtg gcggtgacac gggatcagac tgtgttggta
     1801 caagcaaccg tcatggtgct aaatcggtga cacagattga gctgatgcct aagccgccag
     1861 agcacgagaa caaagaaatg acttggcctt attggccagc taaactcaga acgtcttctt
     1921 cccacgaaga aggcgccgag cgtgactggg cgattacgac caaggcggtc gaaggtgtcg
     1981 atggcaaggt aaccaagctg atcgcggcac gagtgcagtg ggagcgtgat gaggccaccg
     2041 gccagttcaa gatgcaagaa gtgcccgggt ctgagtttga gattcaagcc gacctgattc
     2101 tcctggccat ggggtttgta tctccaattg cgggcgtttt gaaggctttc ggtgtcgaac
     2161 tcgacccacg gggcaatgta cgtgccaaca cggacgatta ccaaacaact ttgcccaagg
     2221 tttttgctgc cggtgatatg cgccgcggtc agtctttggt ggtttgggcg attcgtgaag
     2281 gccgccagtg cgcgcgagct gtggacgagt atttgatggg tgcaaccgag ttgccgcgtt
     2341 aagtgcttag tgggcgctac aatctgccga tgaccgcgtc caccgattca tctgatactt
     2401 cgacttcaac tgcttcgagc cccgtgcttg agtttgacaa tgtgacactg ggttacgggg
     2461 atttcaccgt acttaatggc ttgtcgctca ccgccaaggc aggtgaggtg gtggcggtca
     2521 tgggtggctc tggctccggg aaaacgactc tgatgcgcgc agccactgga cagattggtg
     2581 tcatggatgg tgagctaaag accttcggtc agtccatgcg ccacctcgga cgggtcgaat
     2641 tgcaggcctt gcggcagcgc atgggcgtgt tgtttcaaca cggcgcactt tttaccgacc
     2701 tagatgtatt tgaaaacgtg gcgtttccgc tgcgggagca cacccgtcta gatgagagtg
     2761 aggttgcgct caaagtccta cagaacttag atgcggttgg attaaaggca gcagcgcact
     2821 tgaagctgtc ggaagtctcc gggggtatgg ctcgccgtgt ggctttggca cgcgccattg
     2881 tgcgggaacc tgagctggtc ttctatgacg aaccctttgc aggcttggat cccatttcga
     2941 tggggattgc ggcaagattg atccgccggt tgtcggacaa actcggttgt gcgtcggttg
     3001 tcatcaccca tgatgtacct gaaacgtttg aaatcgctga tacggtttac atcgttggcc
     3061 aaggtgaact caaggccagt gggtcacctg acactttgac cgagtctgat gacccttacg
     3121 tgcgccagtt tctcgagggc gcaccggatg gccccgtggc atttgactac ccccagacgc
     3181 cggcctttga gcgttggtgt cgcgacaaag gggttgaacc gtgagggcga tcaacacgct
     3241 ggccgggatc ggcgccttca ctcgacggca gttggtggtg ctcgggcagc tggcccgatt
     3301 ttttacccag ctactcatgc gttgcggggt gatatttcac cgcccgcggc tgacggtgca
     3361 gcaagtgcac tttatcggca attattcact gatcatcatt gcggtgtcgg gtctgtttgt
     3421 tggttttgtg cttggtttgc agggttacta cacgttaaat cgctatggtt ccgaggaggc
     3481 attgggtctg ctcgttgccc tgtcactaac acgtgagctt ggacctgtgg tgacagcctt
     3541 gttgttcgcg ggacgggcgg gaacctcgct gacggcagag atcggtttga tgaaagccgg
     3601 tgagcaactc gctgccatgg aagttatggc cgttgatcct attcgacgcg tgttggcacc
     3661 ccggttttta gggggcgtta tcgccatgcc tatactggcg gctgtgttct cgatggtggg
     3721 tattattggc ggctgggttg tgggtgtcgt gcttattggc attgattcag gcgcgttctg
     3781 gtcacaaatg caagatggcg tggacgtctt caaggacgtg ttgaacggtg ttatcaaaag
     3841 tgtggtgttt ggtgtggcag ttacgttgat tgccctgttt gaaggttggc aatgcaagcc
     3901 cacgcctgaa ggtgtgtcgc gcgctaccac gcgtacggta gtggcaggct ccctagtggt
     3961 tttagggttg gatttcgtgt tgactgcttt aatgttcagt aattgattcg ggggtcgttc
     4021 tcaatgagca accataagat agacgtgtgg gtcggactgt ttgtgctact tggcatcatt
     4081 gcactggtgt ttctggcgct gcgtgccggt aatctgagta gcttctcgtt tgctgagact
     4141 tatgctgtac aggccaaatt cgacaacctc gg
//
LOCUS       DATBNL010000739         2047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_128604, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000739 DATBNL010000000
VERSION     DATBNL010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128604"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VIC30_12510"
     CDS             complement(<1..914)
                     /locus_tag="VIC30_12510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012348608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEY7805238.1"
                     /translation="MLDIEHFTAPHKNLRVAVVSETWPPEINGVAITMHRLAIELQRR
                     GHAIQVIRPKQTGSGPVMPADASFEETLTKGLPIPAYPHLRMGLPAKRLLTNIWNRQR
                     PDLVHVATEGPLGWSAVQAARKLKIPVSSDFRTNFHSYGQHYGMGKLTKVIAGYLRKF
                     HNLTDFTTVPTDTLRGQLESSGFERLCVISRGIDTHRFSPVHRSHELRAQWTPVPDSR
                     VYLYVGRLAAEKNPGLLAKAWYEIAARDPNARLVIVGDGPAAPMYRNLLPDAIYAGSR
                     TGHDLSVHYASADVFLFPSTTETYGNVVP"
     gene            1107..1718
                     /locus_tag="VIC30_12515"
     CDS             1107..1718
                     /locus_tag="VIC30_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009517198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805239.1"
                     /translation="MKQFLEELRVQRWDDHRFYHQSRINQALHFVSAISFVVAYALMF
                     NDPATAALIAWLISMTTRQSGHFFFEPLGYDEVNQATHEYKESIKVGYNLARKRVLMG
                     TWFLLPAALWFAPDILPFVQPYESVGSWVNAVGWSWFWLGIMALVIRMTQLTIQQNFR
                     TAVVWICKIITDPFHDMKLYYKAPFYLLKGELLDTSMRKGLSH"
     gene            complement(1661..>2047)
                     /locus_tag="VIC30_12520"
     CDS             complement(1661..>2047)
                     /locus_tag="VIC30_12520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805240.1"
                     /translation="CVARFNEAFQVAGYPVRFHALQSIWSVSYACPSRYHWMFQFYLR
                     DAGLALSWVGTGRFIFSLNYTEQDMDDVLARMLSAAKRMQDDGWWWHPPGATTKDLRR
                     AVTREVGGQWLKPLRMLVSRSSPLSK"
BASE COUNT          482 a          593 c          523 g          449 t
ORIGIN      
        1 ggcacaacgt tgccataggt ctcggtggta ctgggaaaca gaaacacatc ggcactggca
       61 tagtggaccg agaggtcatg gcctgtgcgt gagccggcat aaatcgcatc cggcagcaag
      121 tttcgataca tgggtgcggc cggtccatca cccacaatca ccaagcgagc attaggatcg
      181 cgtgctgcga tctcgtacca ggctttggcc aacaatcccg ggttcttctc ggcagctagg
      241 cgtcccacat ataagtacac acgactgtcg ggtaccggcg tccactgcgc tcgtaactca
      301 tgactgcgat gaacggggct gaaacgatgg gtatcgatac cgcgcgagat cacacacaag
      361 cgttcaaacc cagacgactc gagctgtcca cgcagggtgt ccgtgggcac ggtcgtgaag
      421 tcagtcaagt tgtgaaattt gcgcaagtaa cccgcaatca ccttggtcaa cttacccata
      481 ccgtagtgct gtccgtaact atggaagttc gttcgaaagt ctgagctcac cgggatcttg
      541 agtttccgag cggcttgcac cgcagaccac ccaagcggcc cttcagtggc cacgtgcacg
      601 agatccggtc gttgtcggtt ccagatgttg gttagcaagc gcttggcggg caaacccatg
      661 cgcaaatgcg gataggccgg aatcggcaaa cccttggtca atgtctcttc aaacgaggcg
      721 tcagccggca tcaccggacc gctaccagtc tgcttaggtc gaattacctg aattgcatga
      781 ccacggcgct gcaactcaat tgccaagcga tgcatggtga tcgcaacccc gttgatctcg
      841 ggtggccagg tttcagacac caccgccacc cttaggttct tgtgtggggc agtgaagtgt
      901 tcgatgtcaa gcatgtgcga tctccgccat gttgatggat accaacatct tgcccgcgct
      961 ttttgaaata agcgtgacag tcacaagaaa tacttcaaat cttcattaaa aagtcacaca
     1021 gacagacgaa catggcaatc gctgcataga taggccataa acgcccatcg gtgtcgctca
     1081 tcttgtcaac tacgagtcgg atacccatga aacagtttct tgaagaatta cgcgtccaac
     1141 gctgggatga tcatcgcttc taccatcaaa gtcgtattaa ccaggcgctg cattttgtgt
     1201 cggccatcag ctttgttgtg gcctatgcat tgatgtttaa cgaccccgcc acggccgcgc
     1261 tgatcgcctg gctgatttcc atgacgaccc gtcagtcggg tcacttcttt tttgagccgc
     1321 tgggctacga tgaggtcaac caagccaccc acgagtacaa agagtccatc aaagtgggct
     1381 ataacttagc gcgcaagcgt gtattgatgg gcacttggtt cttactgcca gcagcccttt
     1441 ggtttgcccc agacatactg ccctttgttc aaccctatga gagcgttggc tcttgggtca
     1501 acgctgtggg ttggtcctgg ttctggttgg gtatcatggc gctggtcatt cgcatgaccc
     1561 agctcaccat ccagcagaac tttcgcaccg ccgttgtctg gatctgcaag atcatcaccg
     1621 atccattcca cgacatgaag ctctactaca aagcgccttt ttacttgctc aaaggcgagc
     1681 ttcttgacac cagcatgcgc aagggcttga gccactgacc accgacctcg cgcgtcaccg
     1741 cgcgacgcaa gtccttagtg gtggcgcccg gcgggtgcca ccaccaacca tcatcctgca
     1801 tacgtttagc cgcactcagc atgcgcgcca gcacgtcatc catgtcctgc tcggtgtaat
     1861 tcaggctgaa gataaatcga cctgtaccca cccaacttaa cgccaagcca gcgtcgcgca
     1921 agtaaaactg aaacatccag tgataacgcg aggggcacgc ataagacacc gaccaaatgg
     1981 actgcaacgc gtgaaaccgc accgggtaac cagcgacttg aaatgcctca ttgaaccggg
     2041 ccacaca
//
LOCUS       DATBNL010000740         2247 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48123, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000740 DATBNL010000000
VERSION     DATBNL010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48123"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="VIC30_12525"
     CDS             <1..836
                     /locus_tag="VIC30_12525"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY7805241.1"
                     /translation="PKNKVFKLFANHEAAKSLPEGPSVPVLMHFDQSTRGLEVGAPID
                     FHGVHIGVIDSVELDISTVERQFYTRVKATLYPAMLGAAYEEIKARNPDPRSLGKLIE
                     GAVDQGMRAQLREASLLTGGLYIQLIHREGHVANVKNDGQLPIRIPTVPAQTLDDLQK
                     QISQIVEQIDKIPFEQIGKELAASLKELTAVGKSLNQTLTPELSQTLQKLQGTLDDVN
                     GLLKSSDGLPNDVEQSIQQLDEVLRSTRQLVDEVRERPNSLLFGEPSTSYSRETLGAD
                     R"
     gene            833..1483
                     /locus_tag="VIC30_12530"
     CDS             833..1483
                     /locus_tag="VIC30_12530"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiC family protein"
                     /protein_id="HEY7805242.1"
                     /translation="MTKSLLTALVMGAALAGCGGTPNVYYTLTANSEQAGAGNAPAAQ
                     APGLYTLGTANVPPPVDDTMLVVRQSDDQLMKLAHDRWTAPLGKQVSNALAVALTQQL
                     GMPPLSSAQASGKQAPVTKFSVDIQRFDLVPGQFAALTAVWQIRPEASTSTSTRASTT
                     SNESTMSLTCYTELRQSVEPGVAPLVKAQQRNIEQLAQAMSSVWQTGSWPASTRCQ"
     gene            1527..>2247
                     /locus_tag="VIC30_12535"
     CDS             1527..>2247
                     /locus_tag="VIC30_12535"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805243.1"
                     /translation="MRIVQARDVASKLDWLELVAALEAGHQLPKARISDRVLQRADQS
                     LLMRSAWIDGLGMAVKIATIFPDNAKQQLPSVQGNVLLYDDASGTPEAMVDFDLVTRF
                     KTVGDSLLAASKLARPNSNRILLVGAGRIAATALSAYRVLWPRASFEIWNHRPESAQR
                     LVEQFGVDGSVTAVTDLAQAVQKADIICAATLSQTPIIEGRWLQAGQHIDLIGAYRAD
                     MREADDAVMQRGDLYVDSRDTT"
BASE COUNT          514 a          577 c          651 g          505 t
ORIGIN      
        1 tacccaagaa caaggtgttt aagctctttg ccaatcacga ggcagccaag tcgttgcctg
       61 agggcccttc ggtacctgtc ttgatgcact ttgaccagtc aacgcgaggc cttgaagtcg
      121 gtgcaccgat tgatttccat ggtgttcaca ttggcgtgat tgattcggta gagcttgata
      181 tcagcacagt ggagagacag ttctatacac gcgtcaaagc cacgctttat ccggccatgc
      241 tcggtgcggc ttacgaggag atcaaggccc gaaacccaga tccgcgtagt ttgggtaagc
      301 tcatcgaggg tgcggtcgat caaggcatgc gtgcccagtt acgcgaggcg agtctcttaa
      361 ctggtgggct atacatccaa ttgatccacc gcgagggaca tgttgccaat gtaaagaatg
      421 atggtcagtt gccgattcgt atcccaacgg tgcctgcgca aacacttgac gatctgcaaa
      481 agcagatcag ccagattgtt gagcagattg ataagatccc gtttgaacaa atcggcaagg
      541 agttggcggc ttcactcaaa gagctgaccg ccgttggcaa gagcctgaac cagacactta
      601 ccccagagtt gtctcagacg cttcagaaac tgcagggcac cctcgacgat gtcaacggct
      661 tgctgaagtc ttcagatggc ttgcctaatg atgttgaaca gtcaatacag cagctcgatg
      721 aggtgttgag gtcaacgcgg caattggtcg atgaggttcg cgagcgtccg aattcgctac
      781 tgtttggtga accgtcgact tcttattcgc gtgaaacgct aggagcagat agatgaccaa
      841 gtctctatta accgcgctgg taatgggtgc ggctttggct ggctgtggtg gcacacccaa
      901 tgtctattac acattgacag ccaacagcga gcaggccggt gcgggcaacg cccctgcggc
      961 gcaagccccg gggctctaca cgttgggcac tgctaatgtg cccccaccgg tagatgacac
     1021 gatgttggtg gtgcgccagt ctgacgatca gctcatgaaa ctggcgcatg accggtggac
     1081 tgctccattg ggtaagcaag tcagcaatgc tttggcggtg gcgctgacgc agcagctcgg
     1141 gatgccgccg ttgtcgagcg cacaggccag cggcaaacaa gcccctgtca ccaagttctc
     1201 ggttgatatt caacgttttg atctggtgcc tggtcagttc gctgccttga cagctgtttg
     1261 gcaaatcaga cctgaggcgt caacaagcac ctcaacccga gcatcaacaa catctaatga
     1321 aagcaccatg agcctgacct gctacaccga gctgcgccag tcggtcgaac caggtgtggc
     1381 tccgctggtt aaagcacagc agcgcaatat cgagcagtta gcacaggcca tgtctagcgt
     1441 ttggcagacg ggctcatggc cggcttcaac ccgctgtcag tgactcggta acccagtgac
     1501 tcagtaaccc agggcttaga tagctgatga gaatcgtaca ggcaagagat gttgcgtcaa
     1561 agctagattg gcttgagttg gttgctgcac tggaggctgg gcatcagctg ccgaaagcac
     1621 gaatcagcga tcgggttttg cagcgcgccg atcagagttt gctcatgcgt tcggcatgga
     1681 ttgatggcct gggcatggct gtaaaaattg ccaccatatt tccggataat gcaaagcaac
     1741 aactgccttc ggtgcagggc aacgtgcttt tgtatgacga tgcctcaggt acgcctgaag
     1801 cgatggtcga ctttgatctg gtaacgcgtt ttaagacagt gggcgatagt ttgttggcgg
     1861 ctagcaaact cgccagacca aacagcaatc ggattctctt ggtgggtgcc ggacgcattg
     1921 cggccacggc actgtcggct tatcgggtgt tgtggcctcg agcaagcttt gagatctgga
     1981 accaccgtcc cgagtctgcg caaaggctgg ttgaacaatt cggcgttgat ggttctgtga
     2041 cggcagttac cgatctggcc caagcagtac aaaaggccga catcatttgc gcggcgacct
     2101 tgagtcagac acccatcatt gaagggcgct ggttgcaggc ggggcagcac attgatttga
     2161 ttggtgccta tcgggccgac atgcgtgaag ccgatgacgc tgtgatgcaa cgtggcgacc
     2221 tttacgtcga tagtcgtgac accacca
//
LOCUS       DATBNL010000741         1751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_78569, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000741 DATBNL010000000
VERSION     DATBNL010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78569"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VIC30_12540"
     CDS             complement(<1..411)
                     /locus_tag="VIC30_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY7805244.1"
                     /translation="MAKGPIVMTERAPYASDPNQSRGRLYAEAPPVNRTHFQRDRDRI
                     IHANAFRRLEYKTQVFVNHEGDWFRTRLTHSLEVAQIARVIAVSLQLDVDLTEAIALA
                     HDLGHTPFGHAGQDELNRCLQELVPQAGGFEHNLQ"
     gene            complement(412..1503)
                     /gene="aroB"
                     /locus_tag="VIC30_12545"
     CDS             complement(412..1503)
                     /gene="aroB"
                     /locus_tag="VIC30_12545"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004565939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEY7805245.1"
                     /translation="MNNTINVSTPGGEYPIHIGAGRLDRIAESVPDDATSLVIVTNPT
                     VDNLYGNRVRQALTSTGKAVTTVSVPDGERYKDWQTLNLIFDHMLGHQLDRRAVIVAL
                     GGGVVGDMAGFAAAVYMRGIRFIQVPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ISVEIDTTVLETLPDREISAGLAEVVKYGLIMDAPFFGWCQQHAAGLRARDSELLATA
                     IGRSCEFKAKVVSADEREAGLRAILNLGHTFAHAIEAGLGYGQWLHGEAVGCGLVMAA
                     ALSERTLGLPTSDVTQVRDVVQAIGCPTRAPRLMGVDQWLSLMRSDKKAEAGEIKFVL
                     MPQIGQATVGAADTADVVGVLDAFTVENA"
     gene            complement(1500..>1751)
                     /locus_tag="VIC30_12550"
     CDS             complement(1500..>1751)
                     /locus_tag="VIC30_12550"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEY7805246.1"
                     /translation="FIAQRGVVIYLKASLEELLRRTARDRNRPLLAGDDPKARLQALY
                     EQRNPLYDAMADFVLETSAAGVSAAVQQIVSRLKQLKKS"
BASE COUNT          417 a          509 c          457 g          368 t
ORIGIN      
        1 ctgcaggttg tgctcaaaac caccggcttg aggcacaagc tcctgcaggc atcggtttaa
       61 ctcgtcctga cccgcatgac caaacggcgt gtgaccaagg tcatgtgcca aggcgatcgc
      121 ctcagtaagg tcaacgtcta actgcaggct gaccgcgatg acgcgcgcga tctgagcaac
      181 ctccaacgaa tgggttaagc gtgtacgaaa ccagtcacct tcgtggttaa cgaacacctg
      241 tgtcttatat tccagtcgac gaaacgcgtt ggcgtgaata atgcgatcgc ggtcacgttg
      301 gaaatgggta cggttaaccg gcggcgcttc tgcatatagc cggccgcgcg actggtttgg
      361 atcactggcg tacggcgctc gttcagtcat aacaattgga cctttggcca attaggcgtt
      421 ttctacggta aaggcatcaa gcacaccaac cacatcggcg gtatcagctg cgcccacggt
      481 tgcctgaccg atttgaggca tcaacacaaa tttgatctct ccggcctcgg cctttttgtc
      541 cgagcgcatg agcgagagcc actgatccac acccatcagt cgaggggcac gcgtgggaca
      601 cccaatcgcc tgaaccacat ccctcacctg agtcacatca ctagtgggca agccaagtgt
      661 tcgctccgat aaagccgcgg ccatcaccaa gccgcatcca acggcttcac catgtagcca
      721 ctggccataa ccgagccctg cttcaatggc gtgagcaaat gtatggccaa ggttgagaat
      781 ggcccgcaac cctgcctcac gttcatcggc cgagacgact ttggctttga attcgcaaga
      841 ccggccgatc gctgttgcca gcaactcgga atcacgcgcg cgaagaccgg cagcgtgctg
      901 ttggcaccaa ccaaaaaatg gcgcatccat gattaggcca tacttcacga cctcagccag
      961 accggcactg atttcacggt caggcaaagt ctcgagcacc gtggtgtcaa tctcaaccga
     1021 aatcggttgg taaaacgcac cgatcatgtt cttgcctaga gggtgattga ctgctgtttt
     1081 accgcccaca gaggaatcca cttgtgccag tagcgtggtg ggcacctgga taaaacgaat
     1141 gccccgcatg taaacagcgg ccgcaaaccc ggccatgtca ccgacgacac caccgcccaa
     1201 agccacgatc acagcacggc ggtcaagctg atggccaagc atatgatcaa aaatgagatt
     1261 taaggtttgc cagtctttgt atcgctcacc atcgggcacg gacaccgtgg tgacggcttt
     1321 accggtcgat gtcagcgctt ggcgaaccct gttgccgtac agattgtcca ccgttgggtt
     1381 agtgacaatc accagcgaag tggcatcgtc cggcacagat tcggcgatcc ggtctaaccg
     1441 ccctgcacca atgtgaatcg ggtactcacc accgggtgtt gaaacattta tcgtgttgtt
     1501 catgattttt tcagttgctt tagtcgagag acaatttgtt gaaccgcagc agacacaccc
     1561 gcggcgcttg tttctaaaac gaaatcagcc atcgcatcgt aaagcgggtt gcgttgctca
     1621 taaagcgctt gtaatcgggc tttggggtca tcgcccgcaa gcaaggggcg attgcgatcg
     1681 cgggccgtgc gccgtaacaa ctcctcgagt gacgctttga gataaatcac cacaccacgc
     1741 tgcgcaataa a
//
LOCUS       DATBNL010000742         5557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_168859, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000742 DATBNL010000000
VERSION     DATBNL010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5557
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168859"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2102
                     /locus_tag="VIC30_12555"
     CDS             <1..2102
                     /locus_tag="VIC30_12555"
                     /inference="COORDINATES: protein motif:HMM:NF024840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4114 domain-containing protein"
                     /protein_id="HEY7805247.1"
                     /translation="LGEVDKAFLEAIELKQLATTEYPIGDVAYQTDSQGQLQAAYWVE
                     VSRPLLYQAASGKTLYPDGANEGAALVIYRDGELTRLPYATTSGLNQLVQAADTYGPT
                     AIEIFPADESAPALLVIGGEHGLFAAELDQQGMPGTFSAMNIDGLAEGVQLGSAVTGI
                     EYNAQDDLMIASMLGNGSLLFSRTGDIGATPTSAESLHVSQTIVQQALSENLDKRGNP
                     VQGGFVIELGPQAFDDNGMASVEFVIDDADLWRSHLDSVTFYLDPGDSPKAFDLLDRS
                     GSQLVERLTFHEFAGMRLGNFQTRASASELPPISLPYTVNLLDGNDQVIQTVQSSIDL
                     MPNGATPVLYEYDSQLTDRKVFQAQFGYGDGVEFQKLPFVVKTALPATLAQNTELFLF
                     EVDDTSGLIELPDGSSYLPTDPDYLQVAVPAARISSDSPIVSGRSSDLQGLDVEILSR
                     LFGQDDLSGFLATEEVYFGDSAVTSIPLVFDDSEAPIPPLFGMALKSPDGTISASTVS
                     MTTLDGNQVSFVSDQSQDSFVIDVGYGGIFAAQHVESDIQIAKLGELSSAFGFVRVDD
                     LFGTIDGLQPGNAEYVSAALQRSLQEDLSLDLEQGYGSLQSYQVDGFIEGVYYASFIT
                     PGYQTVDSAFESLSEGINVTTPQVLFSFDQANVGADNQLISAAVPFANDLIAFEDMPL
                     NGDRDFNDIAVYYGGLV"
     gene            complement(2187..4100)
                     /gene="thiC"
                     /locus_tag="VIC30_12560"
     CDS             complement(2187..4100)
                     /gene="thiC"
                     /locus_tag="VIC30_12560"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEY7805248.1"
                     /translation="MNANPKFLAATAEVDSAAVTALPKSRKVYETGSRPDIRVPFREI
                     EQSDTSTSFGGESNPPLTVYDTSGPYTDPDASIDIRKGLPALRAAWIDERSDTEALSG
                     PTSAYGQERLSDPALQAMRFELARQPRRAKAGKNVSQMHYARQGIITPEMEYVAIREN
                     LRIEQYIEALRQSGPDGDKIVKRLLRQHPGQSFGASLPGKITPEFVRDEIARGRAIIP
                     ANINHPEIEPMAIGRNFLVKINANIGNSAVSSGIGEEVEKMTWAIRWGGDTVMDLSTG
                     KHIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEELTWEIFKDTLIEQAEQGVDYFT
                     IHAGVRLPFVPMTADRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVS
                     FSLGDGLRPGSTYDANDQAQFAELKTLGELTQVAWKHDVQVMIEGPGHVPMHMIKENM
                     ELQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAALIGWYGTAMLCYVTPKEHLGLP
                     NKKDVKDGIITYKIAAHAADLAKGHPGAAIRDNALSKARFEFRWEDQFNLGLDPDTAK
                     EFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDVREYAKQLGVSEASALEKGMQEKAV
                     EFVKKGAQIYHKT"
     regulatory      complement(4147..4244)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            4405..4614
                     /locus_tag="VIC30_12565"
     CDS             4405..4614
                     /locus_tag="VIC30_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805249.1"
                     /translation="MRPPETYIRMTADIKEHQDAIKQGRLRQDALKAWFEYEETGLYV
                     SDQEADAWLDRLEQGIDTVAPAPHT"
     gene            4891..5349
                     /locus_tag="VIC30_12570"
     CDS             4891..5349
                     /locus_tag="VIC30_12570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805250.1"
                     /translation="MILGLFTTLTGCGAIYDSIVPPPPDERQNVAFYFAQDDYEQGLV
                     MRAARGGEPKVYAQQTPIVQGSDIKLAVPMKDASGYFFVGIQLNDSGARKLAQSTPQM
                     IGMQLALVVDDRLLGAALIDGPIDKGTFAMATSSKNAAFVLSDLLSPAPR"
     gene            complement(5369..>5557)
                     /locus_tag="VIC30_12575"
     CDS             complement(5369..>5557)
                     /locus_tag="VIC30_12575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HEY7805251.1"
                     /translation="FEQGDLVACIDPDGRECARGLINYSSSETRRIMGKPSSQIADIL
                     GEMTESELIHRDNLLVLG"
BASE COUNT         1245 a         1331 c         1592 g         1389 t
ORIGIN      
        1 cgctaggtga ggtcgacaag gcctttttag aagcgattga gctgaaacaa ttggccacca
       61 ctgaataccc cattggtgat gtggcttatc aaacagatag ccaaggtcag ttacaagcag
      121 cctattgggt tgaggtaagt cgtccattgc tttatcaagc agcttcaggc aagacgctct
      181 atcctgatgg cgcaaacgaa ggggccgcac tagtcattta ccgtgacggt gaactgaccc
      241 gcctgccgta tgcgactacg tcgggattaa atcagctcgt tcaagcggca gatacctatg
      301 gtcctactgc gatcgaaatt tttcctgccg atgagtcggc gccagcgctt ttggtgattg
      361 gtggcgagca tggcttattc gctgctgagc ttgatcagca aggaatgccc ggcactttca
      421 gtgcgatgaa tatagatggg ttggctgaag gtgtccaact aggcagcgcg gtaacgggta
      481 ttgagtacaa cgcccaggac gatttaatga tcgcctccat gcttggaaac gggtcattgc
      541 tgtttagccg cacgggtgac attggtgcca cgccgacatc ggcagaaagt ttgcatgtca
      601 gtcagacgat tgtgcaacaa gcgctatcag aaaatttaga caaacgaggt aatccggtac
      661 aaggtggctt cgtgattgag cttggcccgc aggcctttga cgacaacgga atggccagcg
      721 ttgagttcgt catcgatgat gcagatttgt ggcgaagtca tctggattcg gtgacctttt
      781 atctcgatcc tggagactcg cctaaagcct tcgacttgtt ggatcggtcc ggtagtcagc
      841 ttgtcgagcg actaacgttt catgaatttg ctggtatgcg ccttggaaat ttccagactc
      901 gagccagtgc atcagagttg ccgccaattt cattgccata caccgttaac ttgttggatg
      961 gcaatgacca agtcattcag acggtacagt ccagcattga tctgatgcct aacggcgcca
     1021 cgccagtgct ctatgaatac gacagtcagt tgactgacag aaaagtgttt caggcacagt
     1081 ttggatacgg cgatggtgtc gaatttcaga aattgccctt tgtcgtgaag acggcgttgc
     1141 cagcaacgct tgcgcaaaac actgagctgt tcctgtttga ggtggatgat accagcggtt
     1201 tgatcgagtt gcccgatggg tcttcctatt tgccaactga tccggattat ttgcaggtcg
     1261 cggtaccagc ggcacggata tcatcggata gtccaatcgt ttcgggacgc tcgagcgatc
     1321 tgcaagggct cgatgtggaa atcttgagcc ggctatttgg ccaagatgat ttgtcgggct
     1381 ttttggcaac cgaagaggtg tactttggcg acagcgcagt gacatcgata ccgctggttt
     1441 ttgatgactc agaagcaccg atacctccac tattcgggat ggcactgaag tctcccgatg
     1501 gaaccatatc tgcatcgaca gtatcaatga ccacgctcga tggcaatcag gtgtcattcg
     1561 tttccgacca gtcgcaagac agttttgtga tcgatgtcgg atacggtggc atattcgctg
     1621 cacagcatgt tgagagtgat attcaaatag ccaagcttgg cgagctttcg tcggcattcg
     1681 ggtttgtgcg cgtggacgat ttattcggga cgattgatgg gttgcagccc ggcaacgcag
     1741 agtacgtcag tgctgcgttg cagcgcagcc tgcaagagga cttaagccta gatctggagc
     1801 aaggctatgg ttcgttgcag agctatcagg ttgatggatt tatagaaggc gtctactacg
     1861 ctagctttat tacaccaggc tatcaaacgg tagattccgc ttttgagtcg ctaagtgagg
     1921 gtatcaatgt aaccacaccg caggtgttgt ttagttttga tcaagcgaac gttggtgccg
     1981 ataatcagtt gatatcggct gcggtgccgt ttgctaatga cttgatagcg tttgaagata
     2041 tgccgcttaa cggcgatcgc gattttaacg acatcgcggt ctattacggc ggacttgtct
     2101 agtatcgtgc cgtacaagtt agccggggtt tgcttcccgg ctaactgtta gatggtgctg
     2161 tgtcaagcag gtgtcaggcg taggtgtcag gtcttgtgat agatctgcgc gcctttcttg
     2221 acgaactcca ccgctttttc ttgcatgcct ttctcaagtg ccgaggcctc tgacacgccc
     2281 aattgcttgg cgtattcgcg cacgtcttgc gtgatcttca tgctgcaaaa gtgtggacca
     2341 cacatcgaac aaaagtgcgc gactttcatc gagtccttag gcaaggtctc gtcatgaaac
     2401 tctttggcag tatcaggatc gaggccaagg ttgaactggt cttcccagcg gaattcaaat
     2461 cgggcttttg acagcgcgtt gtcacggata gcggcaccgg gatggccttt ggccaggtca
     2521 gctgcgtgtg cagcgatttt gtaagtaatg atgccgtctt tgacgtcctt tttgtttggc
     2581 agacctaggt gctctttagg ggtgacgtaa cacagcatgg ccgtgccgta ccaaccgatg
     2641 agcgctgcac caatgcccga ggtgatgtgg tcatagccag gtgcaatgtc agtggtcagt
     2701 ggtccaaggg tatagaacgg cgcctcatga cagtgctcaa gctgcagttc catgttctct
     2761 ttgatcatgt gcatcggcac gtgaccaggg ccttcgatca tgacctgtac gtcgtgcttc
     2821 caggcgacct gagtcagctc acccaaggtc ttgagttcag caaactgggc ttggtcgtta
     2881 gcatcgtagg tcgagcctgg ccgcaagcca tcacctaacg agaagctcac gtcataggct
     2941 ttcatgatct cgcagatatc ttcgaagtgc tcgtagagaa aactttcttt gtgatgcgcc
     3001 agacaccact tggccatgat tgaaccacca cgtgagacga tgccggtcat gcggtctgca
     3061 gtcatgggga caaagggcag tcgaacgccg gcgtggatgg tgaagtaatc aacaccttgt
     3121 tcggcttgtt cgatgagtgt gtctttgaag atctcccagg tgagttcttc agctttgcca
     3181 tcgacttttt ctagggcttg atagatgggc acggtaccga ttggcactgg cgagttgcga
     3241 atgatccact cgcgtgtctc gtgaatgtgc ttgccagttg agaggtccat gaccgtgtcg
     3301 ccaccccagc gaatcgccca ggtcattttc tcgacttctt cgccaatacc ggaactgacc
     3361 gctgagttac cgatgttggc gttgatcttg accagaaagt tacgcccaat ggccatgggt
     3421 tcaatttctg ggtggttaat gttggccgga atgatggcgc gaccacgggc gatttcatcg
     3481 cgaacgaact cgggcgtgat cttgcccggc agcgatgcac cgaacgattg accggggtgc
     3541 tggcgcagca ggcgtttgac gatcttgtca ccatcggggc cgctttggcg aagcgcttcg
     3601 atgtattgct cgatgcgcag gttctcgcgg atggccacgt actccatttc tggggtgatg
     3661 atgccttgac gggcatagtg catctggctg acattcttgc ccgctttggc gcgccgcggt
     3721 tggcgcgcaa gctcaaaacg catggcctgc agtgcgggat cagatagtcg ttcttggccg
     3781 taagcactgg tcgggccaga taaggcctcg gtgtcgctac gttcatcgat ccaggcggca
     3841 cgcaaagcgg gcagaccttt acggatgtcg atcgatgcgt cagggtcggt gtaaggaccg
     3901 ctggtgtcgt agacggtcag gggtggattg gattcgccac cgaatgaagt ggatgtgtct
     3961 gattgctcga tttcacgaaa cggcacgcga atgtcggggc gtgagcccgt ctcgtagacc
     4021 ttgcgtgatt tgggtaaagc ggtaacagcg gctgaatcga cttcagcggt ggcagctaag
     4081 aacttgggat tggcattcat gtgtagctcc aaaaaaagtt ggagccgagt cggaagaagt
     4141 gcatcggtga tgatgagaca cgcttccagc gtcggcgtta tccggactgg tgctaaggga
     4201 ctctctcaac cgggacattt gtcccagtac ccctgcgttg cgtctttagt ataggcgtgt
     4261 agcgcacaga gttgggcaca ttgacaaggt tttatggatt tttttgttaa ttggaagcgg
     4321 cagagggcag cgggtagcgg gcagcaagtt ttgtttggcg cgtttcatct gctttggtta
     4381 gacctgtaga atctagaaca ccttatgcga ccacctgaaa cctatatacg tatgactgcc
     4441 gacataaaag agcaccagga tgcaattaaa caaggaaggc ttagacaaga cgcattgaaa
     4501 gcttggttcg agtacgaaga gacgggactt tatgtcagcg atcaagaggc cgatgcatgg
     4561 ctagatcgac tcgagcaggg gatagatacg gtcgcaccgg caccacacac gtagttatcg
     4621 attggtcacg cgatctaaac agcattcgcg gtgcagggca tagcggaatg aggcatagtg
     4681 gtgtaggtca ttgcgccgcg gcacgaccta cagcagcaaa ggagccgtca atctgcaaaa
     4741 atgttgtctc aacaatcaag gttaaggttt ggtgcttggc gcaacatcca tgaaccttgc
     4801 ttgcgataag acatcagaaa gaggccggtt attagcgtgt tcacaagtac tcaatgtcta
     4861 gtagtatgcc gatcgtgggt aaaacggttc gtgatactgg gcctgttcac aacgctcacc
     4921 ggctgcggcg ccatctacga ctctatcgtg ccgccaccgc ctgatgagcg tcagaacgtg
     4981 gcgttttact ttgcgcaaga cgactacgag caaggtttgg tcatgcgggc cgcgcgcggt
     5041 ggcgaaccca aggtgtatgc tcaacaaacc ccaattgttc aaggctccga catcaaattg
     5101 gctgtgccca tgaaagatgc ctcgggctac ttctttgtgg gcatacaact aaacgacagt
     5161 ggcgctcgca agttagcgca aagcacacca cagatgattg gcatgcaact ggcgcttgtc
     5221 gttgatgatc gactgcttgg ggctgctttg attgacgggc cgatcgacaa gggcacattt
     5281 gccatggcga catcgagtaa aaacgcggct tttgtattgt cagatttact cagtcccgcg
     5341 ccgcgctagg acttagtaca gcgaggtctc accctagtac aagcaaattg tcgcgatgga
     5401 tgagctcgga ctcggtcatc tcaccgagga tgtctgcgat ttggctgctt ggcttaccca
     5461 tgatgcggcg ggtctcagat gaggaataat tgatcagtcc gcgtgcgcac tcacgaccat
     5521 cagggtcaat gcatgcgaca agatcacctt gctcaaa
//
LOCUS       DATBNL010000743         1567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_128676, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000743 DATBNL010000000
VERSION     DATBNL010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128676"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1548
                     /gene="pnp"
                     /locus_tag="VIC30_12580"
     CDS             <1..1548
                     /gene="pnp"
                     /locus_tag="VIC30_12580"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019936391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY7805252.1"
                     /translation="MQAAIGAINELVRQAGKPEWDWQPAAQDEALISAVTTLAQEPLS
                     QAYQVRQKQQRTTQLREVYADVKAKLIEQAQANGQPEPDSVTVENILHDLESRIVRHQ
                     ILNGEPRIDGRDTRTVRPIEIRLGVLPRAHGSALFTRGETQALVVATLGTKQDEQIVD
                     AITGDYRDRFLMHYNMPPFATGEAGRFGAPKRREIGHGRLAKRSLAALLPKHEDFQYT
                     IRLVSEITESNGSSSMASVCGGALAMMDAGVPLKAHVAGVAMGLILENDKFAVLTDIL
                     GDEDHLGDMDFKVAGTEAGITALQMDIKIQGITKEIMQVALAQAQEGRLHILGKMQAA
                     IDGSRQELSAFAPRMLTMKINPEKIRDVIGKGGATIRALTEETGAQIDISEDGSIVIS
                     SADLDRAQEAQRRIAELTADVEVGQVYEGSVLRLLDFGAIVQVLPGRDGLLHISEIAN
                     YRIANINDILKVGESLRVKVIEADDKGRLRLSVKAIGGIEEQRPELAQPKPVEAHAAP
                     ETNNPES"
BASE COUNT          368 a          404 c          432 g          363 t
ORIGIN      
        1 atgcaggctg ccattggcgc catcaatgaa ctcgtgcgcc aagcaggcaa gcctgaatgg
       61 gattggcagc cagcagcaca agatgaggca ctgatttcag ctgtcacaac cttggcacaa
      121 gaacctctgt cgcaggccta ccaagtccgt caaaagcaac agcgcaccac gcagttgcgc
      181 gaggtctatg ctgacgtcaa agccaaactc atcgagcaag cacaggccaa cggccagcct
      241 gaacctgatt cagtgaccgt tgaaaatatc ttgcacgacc ttgagtcccg tattgtccgt
      301 catcaaattc ttaatggtga gccacgtatt gacggtcgcg atacacgcac ggtgcgtccg
      361 atcgaaattc gccttggtgt cttaccgcgt gcgcacggca gtgccttgtt tacgcgtggt
      421 gaaacacagg cgttggtggt tgccacgctg ggtaccaagc aagacgagca gattgtggac
      481 gccattaccg gtgactatcg tgaccgtttc ttgatgcact acaacatgcc gccgtttgct
      541 acaggtgagg ctggtcgttt tggtgcgcct aagcgtcgcg aaatcggtca tggtcgcttg
      601 gctaagcgct cactggctgc tttgttgccc aagcatgaag actttcagta cacgatccga
      661 cttgtctcag aaattaccga gtccaacggt tcatcgtcca tggcatccgt ttgtggtggc
      721 gctttggcga tgatggatgc gggtgtgccg cttaaggccc atgtggctgg tgtggccatg
      781 ggcttgattc tcgagaatga caagtttgct gttctcacag atatcctagg tgatgaagat
      841 cacctcggtg acatggattt caaggttgcc ggtaccgagg caggtatcac ggctttgcag
      901 atggatatca aaattcaggg catcaccaaa gaaatcatgc aggtcgctct ggcgcaagct
      961 caggagggtc gtttgcacat actcggcaag atgcaagctg ccattgacgg ttcgcgtcaa
     1021 gagctgtcag catttgcgcc ccgcatgcta accatgaaga tcaacccgga aaaaatccgt
     1081 gatgtgattg gtaaaggtgg tgccaccatc cgtgcactga cagaagaaac cggcgctcag
     1141 attgacatct ctgaagacgg ttctatcgtc atttctagcg cagatctcga tcgcgcccaa
     1201 gaagcgcagc gtcgtatcgc tgagctcacc gccgatgttg aggttggtca ggtctatgaa
     1261 ggcagcgtct tacgtttgtt ggatttcgga gcaattgttc aagtgctccc aggtcgtgac
     1321 ggtttgctgc acatctctga gatcgccaac taccgtatcg ctaatatcaa tgacattctg
     1381 aaagtgggtg agtccctacg tgtcaaagtc atcgaagccg acgacaaagg ccgtctgcgt
     1441 ctgtcagtca aagcaattgg tggcattgaa gagcagcgcc ccgagttggc acagccaaag
     1501 cctgtggaag cgcatgcagc tcctgagacg aacaaccccg agagctaatt cggttggtag
     1561 ttccaat
//
LOCUS       DATBNL010000744         2165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_128682, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000744 DATBNL010000000
VERSION     DATBNL010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128682"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VIC30_12585"
     CDS             complement(<1..456)
                     /locus_tag="VIC30_12585"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011828637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY7805253.1"
                     /translation="MQNNERLDAIIIGAGFSGMYQLHCLRDRLGLKTKVLEAGSGVGG
                     TWYWNRYPGARCDSESHSYMYYFSDKLVQEWEWSERYPQQPEILRYLNHVAETLDLKK
                     DMSFDTRVSSAQYDESNNQWVVRTESGDIWRAQFLITAVGCLSSANVPDI"
     gene            complement(535..1260)
                     /locus_tag="VIC30_12590"
     CDS             complement(535..1260)
                     /locus_tag="VIC30_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006227104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7805254.1"
                     /translation="MNPFTLSQKTILITGAAGGIGSETARVCAELGASLILADRNSPH
                     ELVQTLSNNGTACCGIGFDVTDRHATEQVFVELGIPDGIVINAGYCPWDDWSDENWDN
                     VFDTVIDVNLKSAIHLARAALPGMMQRGSGKIVLVSSVAGRNGGLRASPHYVAAKGGI
                     NALVKWLAHKAAARGVTVNGVCPGATQTAMTVGQQFNLDAIALGRMAQAQDIAKPIAF
                     LLGSGSDYMTGATLDVNGGVYMA"
     gene            complement(1428..>2165)
                     /locus_tag="VIC30_12595"
     CDS             complement(1428..>2165)
                     /locus_tag="VIC30_12595"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009520210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004420 - hydroxymethylglutaryl-CoA
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0016054 - organic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HEY7805255.1"
                     /translation="IDTLDAMGANAVNTMAETVAPHLASWTGATHHLRILSNLADRRV
                     VRARAIWKADTIGGSAVVDGIRLAAEFADSDPYRAATHNKGIMNGVSAVALATGNDTR
                     AIEAGAHAYAARTGRYRALSHYEITANGDLAGSIELPMALGTIGGATKVHPMAQACLN
                     ILGVSSASHLSRIVAAVGLAQNFGALKALSTVGIQQGHMALHAQNVAIAAGAVGHEIS
                     LIAHAMTEQNSVRQDVAQQLLIDLRQA"
BASE COUNT          472 a          613 c          572 g          508 t
ORIGIN      
        1 aatgtcgggg acgttggcag atgacaggca gccgacggcc gtaatcagaa attgggcgcg
       61 ccaaatatca cccgattcgg tacgaaccac ccattgattg tttgactcat cgtattgggc
      121 agatgacact cgggtgtcaa atgacatgtc tttttttaaa tccaacgtct cggcgacatg
      181 gttcaaatac cgcaatattt cgggttgctg ggggtaacgc tctgaccact cccattcttg
      241 aacgagtttg tcagagaagt aatacatgta ggagtgactc tctgagtcgc agcgcgcgcc
      301 gggataccga ttccagtacc atgtcccacc aacaccggag ccggcctcca gaacctttgt
      361 cttcagtccg agccggtcgc gcaggcaatg cagttgatac attccagaaa aaccggcacc
      421 aataataatt gcatctagcc tttcattgtt ttgcattttc tgcccataaa gttcgtcatt
      481 aaatagtcca caaagtctga aggtgttcgc ctgttttggc tggcgtctat tcgttcatgc
      541 catgtagacg ccgccgttga catcaagcgt ggcaccggtc atgtagtctg atccgctacc
      601 gagcaaaaag gcaatcggct tggcgatgtc ctgtgcctgc gccatgcgac ccaaggcgat
      661 ggcgtctaga ttgaactgtt gtcccacggt catggccgtc tgtgtcgcgc ccggacaaac
      721 accgttgacg gtcacaccgc gagcggcggc cttatgcgct agccatttaa cgagcgcatt
      781 gatcccgcct ttggcggcaa cataatgagg gctagcccga agaccgccgt tgcgccctgc
      841 cacagaactc accaagacga ttttgccgct acctctttgc atcatgccag gcaatgcggc
      901 tctggccaga tgaatagcac ttttgaggtt gacatcaatc acggtgtcaa acacgttatc
      961 ccagttctcg tctgaccaat catcccacgg acaataacct gcgttgatca caataccgtc
     1021 ggggatgccc agttcaacaa acacctgctc ggttgcgtgg cgatcggtca cgtcgaatcc
     1081 aatgccacag caggccgtgc cattgtttga cagcgtctgg acaagctcat gtgggctgtt
     1141 gcgatcggcc agaatcaacg acgcgccaag ttcggcgcaa acgcgcgcgg tctcgctgcc
     1201 aatgccgcca gccgcccctg taatcaaaat agtcttttgc gatagtgtga atgggttcac
     1261 tgaatttaag ctcttagcgc cgttaacctt tcactgtaga aactagcaca ttgacccacc
     1321 tttggtgcat ctgggcctat cagaaatttc gcctgatcaa acatttggtg cgttttttct
     1381 tgtaggcgag cgatggcagg tctcgggcca ggtctaggct ggtaaggtca cgcctgacgc
     1441 aaatcgatca gaagctgttg cgcaacatct tgtctgaccg agttttgttc ggtcatggcg
     1501 tgcgcaatga gcgagatctc atgacccacc gcaccagctg cgattgccac attctgtgca
     1561 tgtagcgcca tatgcccttg ctggatgccg acggtcgata gcgctttaag cgcaccgaag
     1621 ttctgcgcca gtccgacagc cgccacgata cgtgacaggt gactggcact agacaccccg
     1681 agtatgttga gacaggcttg cgccatcgga tgcactttcg ttgccccacc gatcgtaccc
     1741 agtgccatcg gtaattcaat gctaccagcc agatcaccgt ttgctgtgat ttcgtaatga
     1801 ctcagcgcgc gatagcggcc agtgcgtgcg gcataagcgt gtgcccccgc ttcgatggct
     1861 cgtgtgtcat tgcctgtagc caatgcaacc gcactgacgc cattcatgat gcctttattg
     1921 tgagtggcgg cgcggtaggg atcactgtca gcgaactcgg ctgctagtct gatgccatcg
     1981 acaacggcag aaccaccgat ggtgtcggcc ttccagatgg cgcgggctcg caccactcgc
     2041 cggtcagcca gattggacag gatgcgcaga tggtgggtag cgcccgtcca gctagccaaa
     2101 tgcggagcga ccgtttctgc catggtgtta accgcattgg ctcccatggc atcaagcgtg
     2161 tcgat
//
LOCUS       DATBNL010000745         2611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_158697, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000745 DATBNL010000000
VERSION     DATBNL010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158697"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..773)
                     /locus_tag="VIC30_12600"
     CDS             complement(72..773)
                     /locus_tag="VIC30_12600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEY7805256.1"
                     /translation="MNDFRPSLSRGYAGGATSQVARNKVLRNTYWLLAISLIPTVAGA
                     AFGLFSGLNQVMNASPILSVVVFLGGAFGLMYAIEKNRDSSLGVGLLLLFTFFMGVML
                     SRLLGFVFGMGNGAQLVMLAFGGTAAVFATMATLASTIKRDLSGMQRFLFIGAVIILV
                     AALANMFFQMPALMLTISVLAIGIFSAFMLVDLQRVVNGGETNYVSATLAIYLSIYNV
                     FANLLMLLGIFGGDE"
     gene            complement(911..1351)
                     /locus_tag="VIC30_12605"
     CDS             complement(911..1351)
                     /locus_tag="VIC30_12605"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEY7805257.1"
                     /translation="MTRVDFAFNAGARVAQAAHSTLRHVARGSRLFVYCDDPERMKAF
                     DQALWTVQDTAFVPHEMLHDDSADLPVFLVDQASWPLVAARATEEDWLVNLDDDCPPE
                     ATLFTRVLEVVSRDEHDRAQARTRWRQYQAMGAELHAHQLTNEG"
     gene            complement(1372..>2611)
                     /locus_tag="VIC30_12610"
     CDS             complement(1372..>2611)
                     /locus_tag="VIC30_12610"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEY7805258.1"
                     /translation="KAESAFAKQCVTLGLTQATTALTTVTCPGAESTLLGRLSAQAAS
                     SATYHYDQTMGKPDPKLRPKLKKYVALGERATTRALQTGLDQGAALGQGMALTRTLGN
                     LPGNICTPTYLGNQARALGRQFKSIKVSVLEKKQIEALGMGSFLSVAKGSHEAPRFIV
                     MHYKGKTPAKNKSAGPIVLVGKGITFDTGGISIKPAAAMDEMKYDMCGAATVFGTMHA
                     MATLQWEGELIGLIPSCENMPSGTATKPGDVVKSMSGQTIEVLNTDAEGRLILCDALT
                     YAERFKPSAVIDIATLTGACIVALGTVNSGLFSPDDALADELLASGKRALDPAWRLPV
                     EEEYQESLKSNFADIANIGNNGPKAGATTAACFLARFAKAYRWAHLDIAGTSWLGGAQ
                     KGASGRPVPLLVDYLLRQTP"
BASE COUNT          629 a          714 c          706 g          562 t
ORIGIN      
        1 atcccgttcg tcgttaacga acgggatttc agttgcttcg gtttggcctt gctgtggcta
       61 acgtctactt actactcgtc accaccgaag atgccaagca gcattaacaa gttggcaaat
      121 acgttgtaga tacttaagta aatagccagc gtggcgctca cgtagttggt ctcaccgcca
      181 ttgactacgc gctgcaagtc aaccagcatg aacgctgaaa aaatgccgat cgccagtaca
      241 gagatcgtca gcatcaaggc gggcatttgg aagaacatgt tggccaaggc ggccaccaaa
      301 ataatcaccg caccgataaa taaaaatcgc tgcatgcctg aaaggtcacg tttgatggtg
      361 cttgcgagtg tggccatggt ggcgaacacc gctgctgtgc cgccaaacgc caacatcacg
      421 agttgcgcgc cgttacccat gccaaataca aagccaagca agcgcgagag catgacaccc
      481 ataaagaatg taaacagcag caaaaggccc acgcccaatg aactatcacg gttcttctcg
      541 atggcgtaca tcaaaccaaa tgcaccgcct agaaacacaa ccacgctcag gatggggcta
      601 gcgttcatga cctggtttaa gccactaaac agaccaaagg ccgcaccggc aaccgttggg
      661 atcaatgaga tggccaacaa ccagtaggtg tttctcaaga ccttgttgcg cgccacctga
      721 gaggttgcgc caccggcgta accacgtgac aaggaaggac ggaaatcatt catatgcgtg
      781 cactccaata ccaaaagtag attttgattc taaagcataa aaccgtgaga aaccacggtt
      841 tagtctatga ccgtgaggtt aacggatggt ttcagggggt tcaagcgaaa tcccagcaag
      901 ttgtccggaa ttagccctca tttgtcagct gatgcgcgtg taattcggca cccatggctt
      961 gatactgccg ccaacgcgtt cgcgcctgtg cccgatcgtg ctcatcgcgg ctgacgacct
     1021 ccagcacccg ggtaaataaa gtcgcctcgg gtgggcaatc atcatctagg ttaaccagcc
     1081 agtcctcttc ggttgcacgt gcggccacca gcggccagct ggcctgatca accaaaaaaa
     1141 ccggcagatc agcactgtcg tcgtgcagca tctcatgcgg cacgaaagcc gtgtcctgaa
     1201 cggtccaaag cgcttggtcg aaggccttca tgcgctcagg gtcatcgcag tagacaaaca
     1261 ggcgtgagcc tcgcgcgaca tgacgtaggg tgctgtgagc ggcttgcgcc acccgcgcac
     1321 ctgcattaaa cgcaaagtcg acccgagtca tacccgacct ctgcctccac cttagggggt
     1381 ctggcgcagc aggtaatcaa ccagcaaggg aacagggcgt cccgaggcgc ctttctgtgc
     1441 gccgcccaac caagaggtgc cggcaatatc gaggtgtgcc cagcgatagg ctttggcaaa
     1501 ccgcgctaga aagcaggccg ccgtggttgc accagccttg ggaccgttgt taccgatatt
     1561 ggcaatgtca gcaaaattcg actttagcga ctcttggtat tcttcttcga ctggtaagcg
     1621 ccaggcgggg tcgagagcgc gtttgccaga ggctagcaac tcatcggcca acgcgtcgtc
     1681 cggactaaag aggccggagt tgaccgtgcc aagcgccaca atgcaagcac cggtcagcgt
     1741 agcgatatca atgaccgccg atggcttaaa gcgctcggca taggtcaggg cgtcacacag
     1801 aatgagacgg ccttcagcat cggtgtttaa cacctcgatg gtctgtccag acatgctttt
     1861 gacaacatca cctggtttgg tagcagtgcc gcttggcatg ttctcgcacg aagggatcag
     1921 accaatgagt tcaccttccc attgcagtgt ggccatggcg tgcatggtgc caaacaccgt
     1981 ggctgcgccg cacatgtcat atttcatttc atccatggcc gcagccggct tgatagaaat
     2041 accaccggtg tcaaacgtga tgcctttacc gaccaaaaca attggaccag ccgacttgtt
     2101 cttggcgggt gtctttcctt tgtagtgcat cacgataaaa cgcggcgctt cgtgcgaacc
     2161 ttttgccaca gacaggaacg agcccatgcc aagtgcttcg atttgttttt tctcaagtac
     2221 cgagactttg atggacttaa attgtcgtcc gagtgcgcgg gcctgattgc ccaaataagt
     2281 gggtgtgcag atattgccag gcaggttacc caaggtgcgt gtcaatgcca tgccttgacc
     2341 aagggctgcg ccttgatcta gtccggtttg caaagcgcgt gtggtggcgc gttcgccaag
     2401 tgccacgtac ttctttaatt tgggacgaag tttcgggtcg ggtttaccca tggtctggtc
     2461 atagtgatag gtagcgctac tagcagcctg ggcgcttaag cggcctaaaa gcgtggattc
     2521 agcgcctggg caagtaacag tggtcagcgc agtcgtggct tgggttaatc cgagcgtgac
     2581 acactgttta gcaaaggcgc tctcggcttt t
//
LOCUS       DATBNL010000746         2676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_118511, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000746 DATBNL010000000
VERSION     DATBNL010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118511"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..841
                     /locus_tag="VIC30_12615"
     CDS             <1..841
                     /locus_tag="VIC30_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009457049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805259.1"
                     /translation="VARDITERRKHEQASRLQQEKIQITSRLTTMGEMASSLAHELNQ
                     PLTAISNYSMGAVAMVNAGQTDPDKLLPALEKAAAQAQRAGKIISRIREFVKRSEPRR
                     QSVEIRTIVDNAVSLAEIDARKRAIDIEIQLPADIPNVLADPILIEQVLLNLIKNGLE
                     SMENSKVSVLTLAVKCEHNTVEVSVIDAGHGVADPDRLFEPFFSTKDEGLGMGLNICR
                     TIIESHHGQLWATNNQTPSNPSQTGTTFRFTLPCAPVEILSEIDTAKDQTPENKTTEE
                     FSA"
     gene            838..1464
                     /locus_tag="VIC30_12620"
     CDS             838..1464
                     /locus_tag="VIC30_12620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7805260.1"
                     /translation="MTLPPTASTVYIVDDDEAVRDSLRWLLEANTYRVKAFASAEAFL
                     SEYREDNPGVLIVDVRMPGMSGLQLQEELLARNSHMPVVFITGHGDVPMAVNTMKKGA
                     VDFLEKPFNETDLRDIVSRMFEIANENLQKQQTKREHEAMLGRLTAREQQVLERIVAG
                     RLNKQIADDLGISIKTVEAHRANIMEKLQVTTVADLMKVALAGDASAS"
     gene            1577..2035
                     /locus_tag="VIC30_12625"
     CDS             1577..2035
                     /locus_tag="VIC30_12625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805261.1"
                     /translation="MPLAFIKPLFAVPCILTLLAGCTTPASDTIELPKQAVAVETFAG
                     TQPIVGLSCELSNDRGQWTVVTPGTAQVIPSSEDLSITCANEGEQGDGLARAVSMASA
                     GYLANPAVNLAMPAVAVTEQVRQFTVGITRVYPARIEIMMGQDIIVTATQ"
     gene            complement(2082..2663)
                     /locus_tag="VIC30_12630"
                     /pseudo
     CDS             complement(2082..2663)
                     /locus_tag="VIC30_12630"
                     /inference="COORDINATES: protein motif:HMM:NF024221.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
BASE COUNT          712 a          767 c          674 g          523 t
ORIGIN      
        1 agtcgcgcgc gacattactg aacgtcgcaa gcatgaacaa gcttcacgct tgcagcaaga
       61 aaaaatccag atcaccagcc gtctgaccac catgggtgag atggcatcgt ctctggccca
      121 cgaactcaac caaccactga ctgcaattag caactacagc atgggtgcgg tggccatggt
      181 caatgccggc cagaccgacc cagacaagtt actccccgcc cttgaaaaag ccgccgctca
      241 agcgcagcgt gccggcaaga tcatcagccg tatccgcgag ttcgttaaac gcagcgaacc
      301 acgccggcaa tccgtggaaa tccgcacgat tgttgacaat gctgtgagtt tggccgagat
      361 cgatgcgcgc aagcgcgcca tcgacatcga gatccagtta ccggcagata ttcctaatgt
      421 tctagctgac cccattctta ttgagcaggt gctgctaaac ctgattaaaa atggcttaga
      481 gtccatggaa aacagcaagg tatctgtgct gacacttgcg gttaagtgcg aacacaatac
      541 cgtcgaagtc tctgtcatag atgctggcca cggcgtcgca gacccggatc gcctgtttga
      601 gcccttcttt agtaccaaag atgagggact tggaatgggc ttaaatatct gccgtactat
      661 cattgaatcc catcatggtc agctttgggc caccaacaac caaaccccaa gcaacccctc
      721 gcaaaccggc acgactttcc ggttcacgtt accatgtgcc cctgtcgaga tactaagtga
      781 aatcgacacc gcgaaagacc agacacccga gaataaaacc acagaggagt tttccgcatg
      841 acgctgccgc ctactgccag cactgtttac atcgttgatg atgacgaagc ggtgcgagat
      901 tcgctgcgtt ggttactcga agccaacacc tatcgggtta aagcgttcgc tagtgctgag
      961 gcattcctta gcgaataccg tgaagacaac cccggggtgc taattgtaga cgtacgcatg
     1021 cccggcatga gtggcttaca actacaagaa gaactccttg cccgtaactc acacatgccg
     1081 gtggtgttca tcaccggtca cggtgatgtg cccatggcag ttaacaccat gaaaaaaggt
     1141 gcggtcgact ttctggaaaa gccgtttaat gaaacggact tgagagatat tgtctcgcgt
     1201 atgtttgaaa tcgccaacga gaatttgcaa aagcagcaaa ccaaacgtga acacgaagcc
     1261 atgctcggcc gactcactgc acgcgagcaa caggtgctcg agcgcattgt ggctggtcgt
     1321 ctgaacaaac aaatcgctga cgaccttggt atcagcatca agacagtgga agcacaccgt
     1381 gccaacatca tggaaaagct gcaagtcacc acggtggccg atctgatgaa ggtggcgtta
     1441 gccggtgatg caagcgcgag ctgaaagcgt cgcacctgaa gcagcagtga cacgagcatt
     1501 aacacgagca gtggtaacat atttgcgcga gttactgaca cttcgcgcat tcacgacttg
     1561 ctattcggaa ggactcatgc ccttggcttt tatcaaaccc ctttttgcag tgccatgcat
     1621 cctgacattg ctcgcgggct gcaccacccc ggctagcgac acaattgagc tgcccaaaca
     1681 ggctgtcgcc gtagagacct ttgccggcac acaaccgatt gtggggctca gctgtgaact
     1741 gagcaacgac cgaggacagt ggacggtcgt aacgccgggc acggcgcaag tcatcccctc
     1801 ttccgaggat ctgtcaatca cgtgcgcaaa cgaaggtgag caaggcgatg gtctggcccg
     1861 agccgtgtcc atggcatcag caggctactt ggccaacccg gctgtcaacc tggccatgcc
     1921 cgctgtagcg gtcactgaac aagtcaggca attcaccgtt ggtatcaccc gagtctatcc
     1981 ggcccgcatc gaaatcatga tgggccaaga cattattgtg acagccacgc agtgagttca
     2041 atcgcgccct cctcgggctg tgaccgaaat ctgagccggt gttagcgcct gaggtttgag
     2101 agcagctgca aaatagagat atacagccac accaaggtga ccatcagccc tagggcaaca
     2161 taccagtgaa tgtgatccgg ctgcgcactg cgcctgagtt tgtcgatgcg ctcaaaatca
     2221 cgcagcaagt tcaaagcggc cgtcagtgcc acaaaaccaa accatagaat agccccccaa
     2281 ctgccctgct tgagccagcc aatgggtata cccagcaggc tctagacgat ggcaatcaaa
     2341 tacgccacgg caatgcctgc cgtggcgaca tagaccatca aacgaaacct tggcttggcg
     2401 ctcaaccacc tacctgaata cagcattaac atcacgacaa attcactggc tgtcaccagc
     2461 accgtttgca gtgcgatgcc cgggtatctg acctcaaagg caaatgacaa cccacccatg
     2521 aacagaccgc ccgcaattgc gtatagcggt gccagccaca tcgagaggtc aggcttaaag
     2581 ctcgcaataa aagcgaaact aaaggcggct acgccggcac caaatccaaa gttgcgtgcc
     2641 agtgatgcct catctggaaa caaccaccag atcgag
//
LOCUS       DATBNL010000747         3092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_158708, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000747 DATBNL010000000
VERSION     DATBNL010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158708"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VIC30_12635"
     CDS             <1..353
                     /locus_tag="VIC30_12635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805262.1"
                     /translation="NPAVLHAGNGLGVAFSTDGTYMAVAHVTTPFITIYKRSGDVFTK
                     LANPAVLPAQHCNGVAFSTDGTYMAVAHTTTPFITIYVGQGVDDPLIEFRVPRIDVSP
                     ITTADALPFIKAED"
     gene            357..779
                     /locus_tag="VIC30_12640"
     CDS             357..779
                     /locus_tag="VIC30_12640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805263.1"
                     /translation="MRTIYELDGNRIYTGQSRQITDKDGRPPRWIETNLTPPDGIAQW
                     RGNEWAVLPEYPVAPVSVPQSITMRQCRLQLLAIGKLADVDTAIAGMPDPAKSAAQIE
                     WEYAATVERNAPLIAQLGPALGLDGAALDDLFIAAATL"
     gene            776..1021
                     /locus_tag="VIC30_12645"
     CDS             776..1021
                     /locus_tag="VIC30_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805264.1"
                     /translation="MKHSRLHRLADATSQWLNVLFWDGEANHSISGDAYRFKRVRLQR
                     VIDWVFEQFGEHEHCLGSYLADLERAKKLVAEDQNVR"
     gene            1011..1418
                     /locus_tag="VIC30_12650"
     CDS             1011..1418
                     /locus_tag="VIC30_12650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805265.1"
                     /translation="MSDESEEKSTHQMVIGLHRRFDHVEENVKALTDQAQLASERMIR
                     MEGRIGLAEAKADALAERETLIHANVKDALAATNNLVKKLFDKFDQHTVDEHNERMQT
                     MKDSKKMMLWVITTCVSVLTGIGMVLFTEVFTK"
     gene            1561..1911
                     /locus_tag="VIC30_12655"
     CDS             1561..1911
                     /locus_tag="VIC30_12655"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEY7805266.1"
                     /translation="MRHFKPSEFACKCGCGKAEMNEDTLFKLDFARHLADIPFVVTSG
                     YRCEAHNRRVGGKSNSAHTRGYAVDIRVNNSAARYAILDALMRAGFNRIGIANTFIHA
                     DDDPNLPPNVMWNY"
     gene            1913..2335
                     /locus_tag="VIC30_12660"
     CDS             1913..2335
                     /locus_tag="VIC30_12660"
                     /inference="COORDINATES: protein motif:HMM:NF022795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin family protein"
                     /protein_id="HEY7805267.1"
                     /translation="MALPILIPAALTLIDKLFPDANSANDAKLKVLEMQQRGELAALE
                     ADIALASGQMETNKAEAQSGRLFISGWRPFIGWTCGAAFAFNFVGLPALVTISAMMGN
                     PIELESLDMTEMMPVLLGMLGLGGFRTYEKINKANHRH"
     gene            complement(2496..2654)
                     /locus_tag="VIC30_12665"
     CDS             complement(2496..2654)
                     /locus_tag="VIC30_12665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805268.1"
                     /translation="MPTYNGESWLDRYRREALIDQERLDSLERLNESRELDCADSETA
                     QADPVSAA"
     gene            complement(2868..>3092)
                     /locus_tag="VIC30_12670"
     CDS             complement(2868..>3092)
                     /locus_tag="VIC30_12670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805269.1"
                     /translation="MKEVHVRLNCETRELIADLSAIQNEVNKFAAHREQDEALMRQAL
                     EALDEYIYACTPKADKLGIDAVRALRERLE"
BASE COUNT          744 a          765 c          835 g          748 t
ORIGIN      
        1 ccaatcctgc tgtattgcat gcgggtaatg gccttggcgt agcgtttagt actgatggca
       61 cttatatggc tgtggctcat gttactaccc cattcattac tatttacaag agaagcggtg
      121 atgtattcac taaactagct aatcctgccg tattgcctgc gcagcattgc aatggcgtag
      181 cgtttagtac tgacggcact tatatggctg tggctcacac cacaacccca ttcatcacta
      241 tctatgtggg tcaaggcgtt gatgatccat tgatagagtt tcgagttcct cgaattgacg
      301 tttcgcccat aacaactgct gacgcactcc cattcatcaa ggcggaggat taagccatga
      361 gaacaatcta cgaacttgat ggcaatcgta tctacaccgg gcagtcccgc caaatcacgg
      421 ataaagacgg tcgtcctcca cgttggattg aaaccaatct gaccccaccc gacggcatcg
      481 cgcaatggcg cggtaacgag tgggcggtgt tgccggaata cccggtcgcg cctgtttctg
      541 tgccgcaatc catcaccatg cgacaatgcc gtttgcaact gttggctatt ggcaagctgg
      601 ctgatgtgga tacggcgatt gccgggatgc ctgatcctgc aaaatcagcg gcgcagatcg
      661 agtgggaata tgctgcaacg gtcgagcgca acgcaccatt gattgcgcaa cttgggccag
      721 cgctcggact ggatggtgcc gcgcttgatg acttatttat tgctgctgcg acgttatgaa
      781 acactcccga ctgcaccgac tcgctgatgc gacaagccag tggttaaacg tgctgttctg
      841 ggacggcgag gcgaaccact ccatcagcgg cgacgcctac cgattcaagc gagtgcgctt
      901 gcaacgggtt attgattggg tgtttgaaca attcggcgaa cacgagcatt gtctcggcag
      961 ctatcttgcc gatttggagc gagcaaaaaa attagttgca gaggatcaga atgtccgatg
     1021 aatcagagga aaaaagcacg caccagatgg tcattgggct acatcggagg ttcgatcacg
     1081 tcgaggaaaa cgtgaaagct cttaccgatc aagctcaact ggcaagcgaa aggatgatcc
     1141 gcatggaagg ccgtattggg ctagctgagg ccaaagctga tgcgttagca gagcgtgaga
     1201 cgctgatcca tgcgaacgtt aaagatgctc tagctgcaac aaacaacctt gtcaaaaagc
     1261 tctttgataa gtttgatcag catacggtgg atgagcacaa cgaacgcatg cagacgatga
     1321 aagacagtaa gaagatgatg ctgtgggtca ttactacttg cgtctccgtg ctgactggaa
     1381 tcggcatggt gctattcacc gaggtcttta cgaaatgaca actccagaaa agtgtaagaa
     1441 gtgcgaaaac ctagctacat acatcactga gggaaaaaag cgcgagacgt gccagaaggg
     1501 taagccgatg aaagaggatt gtgtttggtt tgttatcaga gcgtataggc gtgcaacgac
     1561 atgagacatt tcaaaccatc tgaattcgcg tgcaagtgcg gatgcggaaa agccgaaatg
     1621 aacgaagata ctttgttcaa actggacttc gcgcgacatc ttgcagacat tccgttcgtg
     1681 gtcacatctg gataccgctg cgaggctcac aatcgacgcg taggcggcaa atcaaactcg
     1741 gcgcacactc gtggctacgc ggtcgatatt cgggttaata attcggcggc gcgttatgcg
     1801 atcctagatg cgttgatgcg tgccggattc aaccgtattg ggattgccaa tacgttcatc
     1861 catgccgacg atgatccgaa cttgccgcct aacgtgatgt ggaactactg atatggcact
     1921 gccgattttg atccctgccg cgctcactct gattgacaag ttgtttcccg acgcgaactc
     1981 agcgaacgat gccaagctga aggtgttgga gatgcagcaa cgaggcgaac tggccgcgct
     2041 tgaagccgat attgcgcttg ccagcggtca gatggaaacc aacaaagctg aagcgcaatc
     2101 aggccgtttg ttcatatcag gatggcgacc gtttatcgga tggacgtgcg gcgcggcgtt
     2161 tgcgtttaac ttcgtcgggc ttccagcatt agtgaccatc tctgctatga tgggtaatcc
     2221 gatagagttg gaatcgctgg atatgaccga gatgatgccg gtgttgctcg ggatgctcgg
     2281 gctgggcgga ttccgaactt acgagaaaat caacaaggca aatcatcgcc attagatcaa
     2341 cggggggcgc aaccttttag gttgtttcgg cgtggggcac ataccgccct cccaccaaac
     2401 tttggagcat gacatgggcg atgtaatcag attcaactgg acggtgtttc gggcgctatg
     2461 tggtctgcat cgcacgccgt tgctccgcga gcaagtcaag cggctgaaac tggatccgct
     2521 tgcgccgttt ccgagtcagc gcaatctagc tcccgtgatt cgtttaagcg ctccagactg
     2581 tctagccgtt cctgatcaat aagcgcttct cgccggtagc ggtcgagcca ggattctccg
     2641 ttatatgtgg gcattgcttt gctccttaat gtgttgctcg cagtagtccc atttggggac
     2701 gggtgcgatg tatgaataaa aaacagtgtg cggaaacgta ggcggattac aaaatacgct
     2761 atgttcaaaa tgtctttttt cgtcccggtg tatttgcaac attcgtgcgc agttgttgca
     2821 tatcggatca tctttgccgt gacaccggga tacgtcgtta ggtaggttca ttccaacctc
     2881 tcccgcaacg ccctgaccgc atcaatccca agcttgtcgg cctttggcgt gcatgcgtag
     2941 atgtactcgt ccagcgcctc aagcgcctga cgcatcagcg cttcgtcttg ctcacgatga
     3001 gcggcaaact tgttcacctc attctgtatt gccgacaggt ctgcaatcag ttcccgagtc
     3061 tcacagttta gtcgtacatg gacttctttc at
//
LOCUS       DATBNL010000748         1612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_8568, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000748 DATBNL010000000
VERSION     DATBNL010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8568"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..>1612
                     /locus_tag="VIC30_12675"
     CDS             199..>1612
                     /locus_tag="VIC30_12675"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY7805270.1"
                     /translation="MTTAASKPTSKSAPDPGRKTAKSLGSLTRWWRDYRVFSRYRGQW
                     LLALLFLLLAAGATLAVPLTFRGLIDVGLASPKVNEKFLDLLMVAVVLALATAARFYV
                     MSWLGERVVADIRKQVFDNVLRQSPDYFETLQTGEVLSRLTSDTTLVQTLVGSSISIA
                     LRSAVLLIGGIVMMLITSAWLASVMIVLLLVVVLPLWALGRYVRKLSRTSQDKVADTS
                     AMAGEVLNAITTVQAFVREPHESKRYAVAVEAAFAQAKKRTALRSGLAAVTIVMAFSV
                     MVFVLWMGARDVASGQMSVGDLTQFVLYAVLIAGSIGALSETWGDLQRAAGATERLVE
                     LMQARPALSAGVGSTHSSLATAPNPAVNTSPAVPAIEFQNVSFAYPSQPDRLTLNQMS
                     FSLPRGARYALVGPSGAGKSTLFAMLLRFYQPQSGRIELFGRDVSDWPVDELRQQIGV
                     VTQEPVIFSASAMENIRYGRL"
BASE COUNT          320 a          380 c          488 g          424 t
ORIGIN      
        1 gtttttgtgg ttgttggttt ttgtcatggc tcgaggctgt ttattgggct gatttcaggc
       61 aacgagtcgg aggcagactc taactgattt aggtgcgcaa caaattcatg atattcatca
      121 acaccacagc tcaaatatca ttgtttcgct agggcttgta accactaaag cacctgacta
      181 gcccgtacac tgcagagcat gacaaccgcc gcatcaaaac ccacctccaa atccgcgcct
      241 gatcccggac gtaaaaccgc caagtcgttg ggcagtctca cccgttggtg gcgtgactac
      301 agggtgttct cgcgctaccg agggcagtgg ttgttggcac tgctctttct gttgctggct
      361 gcgggtgcga cgctagctgt gccactgacg tttcggggat tgattgatgt cgggcttgcg
      421 agccccaagg tcaatgaaaa gtttctggat ttgttaatgg tagcggtggt gctggcactc
      481 gcgactgcag cccggttcta tgtcatgtct tggctcggtg agcgggtggt ggccgatatt
      541 cgaaagcagg tgtttgacaa cgtcttgcgt caaagcccgg attatttcga gacgctgcaa
      601 acaggtgaag tgctgtcacg attaaccagt gacaccacgt tggtgcagac cttagtgggc
      661 tccagtattt caattgcgct acgcagtgcg gtattactta ttggcggcat cgtgatgatg
      721 ctgatcacca gtgcctggct ggccagtgtc atgattgtgt tgttgctggt cgtcgtgctg
      781 ccactgtggg ccttggggcg gtacgtccga aagttgtctc gcaccagtca ggacaaggtc
      841 gcagatacca gtgccatggc aggagaggtg ttaaacgcca ttacaaccgt acaagccttt
      901 gtacgtgaac cgcacgaatc taaacggtat gccgttgctg ttgaagcggc atttgctcaa
      961 gccaaaaaac gcacggcgct tcgttcgggg ttggcggcgg tgacgattgt gatggcattt
     1021 tcggtcatgg tgtttgtgct gtggatgggt gcccgtgatg tagcaagtgg tcagatgtcg
     1081 gtgggtgatt taacgcagtt tgtgctgtat gccgttctga tagcaggatc gatcggggcg
     1141 ttgtccgaga cctggggtga tttacagcgc gccgctggtg ccactgaaag gctagtggaa
     1201 ctgatgcagg ccaggcctgc actttctgct ggtgtgggct caacgcactc tagtttggct
     1261 acagcgccta atccagcagt caatacgtca ccggcggtgc cagccattga gtttcagaat
     1321 gtgtcgtttg cttacccgtc ccaacccgac cggttaacgc taaaccaaat gagtttcagt
     1381 ttgccgcgcg gtgcgcgcta tgccttggtg ggaccatctg gtgcgggtaa aagcacgttg
     1441 tttgcgatgt tgctgcggtt ctatcagcca caaagcggtc ggattgaatt gtttgggcgc
     1501 gatgtgtctg actggccagt cgatgaactg cgtcagcaga tcggtgtggt gacacaagag
     1561 ccggtgattt tttcggccag tgccatggag aacattcgtt atggcagatt gg
//
LOCUS       DATBNL010000749         1932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_38441, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000749 DATBNL010000000
VERSION     DATBNL010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38441"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VIC30_12680"
     CDS             complement(<1..270)
                     /locus_tag="VIC30_12680"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019451187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HEY7805271.1"
                     /translation="MPAVETESRWETSHRWPVRVYYEDTDAGGVVFYANYLKFMERAR
                     TEWLRTLGFEQQSLINQHGIGFIVAALDMKYRAAARLDDHLTIQTS"
     gene            complement(282..>1932)
                     /locus_tag="VIC30_12685"
     CDS             complement(282..>1932)
                     /locus_tag="VIC30_12685"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018025511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEY7805272.1"
                     /translation="RAGMIRKLAGGIYNYMPLGLRTIRKVEAVIRQEMDRAGALELLM
                     PVVQPAELWQESGRWEKYGPELLRVKDRHGRDFILQPTSEEVITDIARNEIKSWRQLP
                     VNFYHIQTKFRDERRPRFGIMRGREFTMKDAYSFDRDVDGAMKSYQTMFDAYQRIFTR
                     LGLDFRAVAADTGSIGGSSSHEFQVIADIGEDAIVYNPNTTYAANIELAAAPCLIEQR
                     ATATQAMQKVHTPNAATCEEVKNLLSIDLKQTVKSIVLATEPEDAPVRIWLLLLRGDH
                     DLNEIKVSKLPGFEDGFRFATEAEIQQHFGSPPGYLGPVGIDASVAIIADTTVANMSD
                     FVCGANEAPYHLQGVNWARDLPEPSLVADIRNVVAGDPSPDGNGTLNIQRGIEVGHVF
                     YLGTKYSEALKATCLDETGKPALMEMGCYGIGVTRIVGAAIEQNHDERGIVWPKAMAP
                     FEVVVCGLGWGKSEAVREAATDLYKTLLEAGHDVILDDRDLRPGVMFAEWELIGVPLR
                     ITVGDRGLANGQVEVLEREQTSAELVNLTDVPAQVAAKLSH"
BASE COUNT          423 a          539 c          499 g          471 t
ORIGIN      
        1 gcttgtttga atcgtcaagt gatcatcgag tctggctgca gctcggtact tcatgtccaa
       61 agccgcgaca atgaaaccga tgccgtgctg gttaatcagc gattgttgct caaaacccaa
      121 ggtccgaagc cactcggtac gggctctttc catgaatttt aagtagttag cgtaaaacac
      181 taccccgcca gcatcggtgt cttcgtagta aacccgcacc ggccagcgat gtgatgtttc
      241 ccacctgctt tctgtctcta ctgccggcat attcatgtga atcagtgact aagttttgcc
      301 gctacttgtg cgggtacatc agttaggttc actagctctg cgctcgtttg ctcacgctca
      361 agcacctcaa cctgaccatt agccaaacca cggtcaccaa cggtgatgcg cagtggtaca
      421 ccgatgagct cccattcggc aaacatcacg cctgggcgta aatcgcggtc atccaaaatc
      481 acgtcatggc ctgcttctag caaagttttg tacaaatcgg tcgccgcctc acgtacggct
      541 tcacttttac cccagcccag gccacacacc acaacctcaa agggggccat ggctttgggc
      601 catacgatgc cgcgctcgtc gtggttttgt tcgatggctg caccaacgat tcgtgtcaca
      661 ccaatgccgt agcaacccat ttccatgagt gccggtttgc cggtttcgtc taaacacgta
      721 gctttgagtg cttcggagta cttggtgcct agataaaaga cgtgacctac ttcgatgcca
      781 cgctgaatgt tgagcgtgcc gttgccatcg ggtgacgggt caccagccac cacattgcgt
      841 atgtctgcca ctaaagatgg ttctggcaag tcacgtgccc agttaacacc ctgcaggtga
      901 tagggtgcct cattggcgcc acaaacaaag tcgctcatgt ttgccacagt cgtatcggca
      961 atgatggcga cggacgcgtc aatgcctacc ggacccaagt acccgggtgg cgaaccaaaa
     1021 tgttgttgga tttctgcttc tgttgcgaag cgaaacccat cttcaaaccc gggtaacttg
     1081 ctgactttga tttcgtttag atcatggtcg ccccgcaata acaacagcca gatgcggacc
     1141 ggcgcgtctt cgggttcggt ggccaggaca atcgatttaa ccgtttgctt taagtcgata
     1201 gacaggaggt ttttgacctc ctcgcacgtg gctgcattgg gcgtatgtac cttttgcatg
     1261 gcttgcgttg cggttgcgcg ctgctcaatc aagcacggtg cggcggcgag ctcaatgttg
     1321 gcggcatatg tggtgttggg gttgtagaca atcgcatcct cgccaatgtc ggcgatgacc
     1381 tgaaactcat ggcttgatga tccgccgatg gagccggtgt cagcggccac ggctcgaaag
     1441 tcgagtccca aacgggtgaa gattcgttgg taagcgtcaa acatcgtttg atagcttttc
     1501 atggcaccat cgacatcgcg gtcaaacgaa tatgcgtctt tcatggtgaa ttcgcgacca
     1561 cgcataatgc caaaccgcgg gcggcgctca tcgcgaaact tggtctgaat gtgatagaag
     1621 ttcacgggca gctgccgcca acttttgatt tcatttcgag cgatgtccgt aatgacctct
     1681 tctgatgtgg gctgcaaaat gaagtcacgc ccatgacggt ccttaacgcg cagaagctca
     1741 ggaccatact tctcccagcg gcctgattct tgccagagtt cagccggctg aaccaccggc
     1801 atgagcaact ccagcgcgcc ggcccgatcc atctcttggc gaatcactgc ctcgactttg
     1861 cgaatcgtgc gcaagcctag tggcatgtag ttataaatgc cgccagcgag tttacgaatc
     1921 atgccagccc gg
//
LOCUS       DATBNL010000750         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_138671, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000750 DATBNL010000000
VERSION     DATBNL010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138671"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VIC30_12690"
     CDS             <1..419
                     /locus_tag="VIC30_12690"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY7805273.1"
                     /translation="GKEGQPEAATPTFPARYAIVAQLMSVTHNWRLRIRTWPTDNEFP
                     VLSSLVDVWPAANWYEREAFDLFGVVFEGHPDLRRILTDYGFIGHPFRKDFPIYGNVE
                     MRYDPEQGRVIYQPVTIEPREIVPRVIREDGYGVGR"
     gene            422..1678
                     /locus_tag="VIC30_12695"
     CDS             422..1678
                     /locus_tag="VIC30_12695"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014191758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEY7805274.1"
                     /translation="MAEIKNYTLNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLH
                     RATEKLAENRTFIQALPYMDRLDYVSMMCNEHAYVMAIEKLMGVTPPLRAQYIRVMFD
                     EITRILNHLMSLGSHALDVGAMAVFLYAFREREDLMDCYEAVSGARMHAAYYRPGGVY
                     RDLPDAMPQFKGEAKFRSEKDIKIMNEARSGSLLDFIEDFTNRFPACVDEYETLLTDN
                     RIWKQRLVGIGVVDPERAKALGFTGPMLRGSGVEWDLRRMQPYEVYDRMSFDIPVGVN
                     GDSYDRYLVRVAEMRESNRIIAQCVQWLRNNPGPVMVDNHKVTPPHRTDMKTNMEELI
                     HHFKLFTEGFHVPEGEVYSAIEHPKGEFGIYLVSDGANKPYRLKIRAPGFAHLQSLDE
                     MTKGHMLADAVTIIGTQDMVFGEIDR"
     gene            1719..>2158
                     /gene="nuoE"
                     /locus_tag="VIC30_12700"
     CDS             1719..>2158
                     /gene="nuoE"
                     /locus_tag="VIC30_12700"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEY7805275.1"
                     /translation="MLLSEQAYKKIDRELTKYPEDQKRSAIMAALAIAQDEKGWVSPE
                     VIEDVATYLEQPPILVQEIATFYNMFDVKPVGRFKITVCTNLPCALRDGEKTIDYIKQ
                     KLGVDLGQTTADGQFTVIEGECMGACGDSPVLLVNNKHMCVRMTP"
BASE COUNT          502 a          516 c          621 g          519 t
ORIGIN      
        1 tcggtaaaga aggtcagcct gaggctgcca caccgacgtt tccggcgcgc tacgcgattg
       61 tggcgcagtt gatgtcagtg acgcacaact ggcgtctacg tattcggaca tggcccacgg
      121 acaatgagtt tccagtgctg agttcgctcg ttgatgtttg gcctgcggct aactggtacg
      181 agcgcgaagc gtttgacttg ttcggcgttg tattcgaagg gcaccctgat ttgcgccgca
      241 tcctgacaga ctacggtttc attgggcacc cctttaggaa agacttcccg atttatggca
      301 atgtagaaat gcgctacgac cctgagcagg gtcgcgtgat ctatcagccc gtgacaatcg
      361 aaccaagaga aattgtgccg cgcgtgatac gcgaggatgg ctatggagtg gggcgctaat
      421 catggctgaa atcaaaaact acacactgaa cttcggaccg cagcacccag cagcacacgg
      481 cgtgttgcga ctcgtgcttg aacttgacgg tgaagtgatc cagcgcgctg atccacacat
      541 cggtctcttg caccgggcaa cagaaaagct cgctgagaat cggacgttca tccaggcgtt
      601 gccatacatg gaccgactcg attacgtgtc gatgatgtgc aatgagcatg catacgtcat
      661 ggccattgaa aagctcatgg gcgtcacgcc gccgctgcgt gcacagtaca tccgtgtgat
      721 gttcgacgaa attacccgaa ttctgaatca cctaatgtcg cttggctcgc atgctttgga
      781 tgtgggtgcc atggctgtgt ttttgtatgc cttccgtgaa cgggaagact tgatggattg
      841 ctacgaggcg gtttctgggg cgcgtatgca cgccgcctac tatcgcccgg gtggtgtata
      901 tcgtgatctg cccgacgcca tgccacagtt caaaggtgaa gcaaagttcc ggtcagagaa
      961 agacatcaag atcatgaacg aggctcgctc gggctctctg ctggacttca ttgaggactt
     1021 tacgaatcgg ttcccggcct gtgtcgacga gtatgaaacg ttgttaactg acaaccggat
     1081 ctggaagcaa cgcttggttg gcatcggtgt ggtcgatcct gaacgtgcca aggcgttggg
     1141 ctttactggc cccatgttgc gaggctcggg tgtcgagtgg gatttgcgca ggatgcagcc
     1201 ctatgaagtc tacgaccgta tgtcatttga catcccagta ggtgttaacg gtgattcgta
     1261 tgaccgttac ttggtgcgtg tggctgagat gcgtgagagc aaccgcatca ttgcccaatg
     1321 tgtgcaatgg ttgcgcaaca atcccggtcc agtgatggtt gataaccata aggtgacgcc
     1381 accccatcgt actgacatga aaaccaacat ggaagagctg attcatcact ttaagctctt
     1441 taccgaaggt ttccatgtgc ccgaaggcga ggtttacagc gccatcgagc atcctaaagg
     1501 ggagttcggt atttacctcg tgtcagacgg tgctaataag ccgtatcgcc tgaagattcg
     1561 ggcgccaggg tttgcgcatt tgcagtcatt ggatgaaatg acgaagggtc atatgttggc
     1621 agacgctgtg accattattg gaacccagga catggtgttt ggcgaaattg atcgttgaga
     1681 ttgatcgtca atgacgccaa gaaacggata gattgaacat gttgctttca gaacaggcct
     1741 ataaaaagat tgatcgggaa ttgactaagt accccgagga tcaaaagcgc tccgccatca
     1801 tggcggcgtt ggctatcgcg caagacgaaa agggttgggt gtcgcccgag gtaattgagg
     1861 atgtggccac ctatttggag cagccaccca ttttggtgca agaaattgcg acgttctaca
     1921 acatgtttga cgtcaagccc gtgggtcgct tcaagatcac ggtttgtacc aacttgccct
     1981 gtgcgttacg tgacggggaa aaaacgatcg attacatcaa gcaaaaactt ggtgttgatc
     2041 tcggccaaac cacggccgat ggtcagttca ccgtgattga aggtgagtgc atgggtgcat
     2101 gtggtgattc gccggtgctg ttggttaaca acaagcacat gtgcgtgcgc atgacgcc
//
LOCUS       DATBNL010000751         2859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_197869, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000751 DATBNL010000000
VERSION     DATBNL010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2859
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197869"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..661
                     /locus_tag="VIC30_12705"
     CDS             149..661
                     /locus_tag="VIC30_12705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012345125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY7805276.1"
                     /translation="MNAVLLPQTTNTKRPSLLTAVLTLLAMLCLSVMLAPAAHAQSEA
                     AIDEMAGYMDFSEYGGGVIFAEQIPKEEYENIMVIDARDADQFAKDHIPGAVNIEWRQ
                     VLNERENLPDDKMVLLYCNTGTLSAQAGFALRVAGHENVRILQGGFEEWKAKGGFEAN
                     ARATEQATKD"
     gene            677..1351
                     /locus_tag="VIC30_12710"
     CDS             677..1351
                     /locus_tag="VIC30_12710"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015601984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY7805277.1"
                     /translation="MHTKDHWDKIYATKDVDSVSWYAPHLDKSLALIEAICPDKTAAI
                     VDIGAGESTLVDDLLSRGYQDLSVLDISQTAIEFTKHRLDCLDRLGEKSKRVNWHVGD
                     ITRYDFGAKQFDLWHDRAVFHFLTDQDARVAYVQTLRRSVKPGGHVLMATFGPEGPLQ
                     CSGLDVVRYDEKQLKDVLGDGFKLLGSELTTHLTPMGSEQQFLYCWFEVVRPWRGFRF
                     HRDIDA"
     gene            complement(1391..1747)
                     /locus_tag="VIC30_12715"
                     /pseudo
     CDS             complement(1391..1747)
                     /locus_tag="VIC30_12715"
                     /inference="COORDINATES: protein motif:HMM:NF023857.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
     gene            complement(1783..2016)
                     /locus_tag="VIC30_12720"
     CDS             complement(1783..2016)
                     /locus_tag="VIC30_12720"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY7805278.1"
                     /translation="MYVCNCAGVTERDIHEAVDRGATSLRDLRRELNVAADCCQCACD
                     AKRCLRERKALSEQVDLSNLARLGKLGDLGLVA"
     gene            complement(2042..2521)
                     /gene="bfr"
                     /locus_tag="VIC30_12725"
     CDS             complement(2042..2521)
                     /gene="bfr"
                     /locus_tag="VIC30_12725"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011515102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEY7805279.1"
                     /translation="MKADRKIITALNAVLKSQLTGINQYFLHARMFANWGFEGLNKSH
                     YKTSIKLMKESDKLIERILFLEGLPNLQSLGKLQIGENVHEALKGDLNYELTSQHVAI
                     QDAIKVTGELHDFASEEMLRDLMQSCEDNIDQLETRLSLIETMGLANYLQTQVEEDD"
     gene            complement(2535..>2859)
                     /locus_tag="VIC30_12730"
     CDS             complement(2535..>2859)
                     /locus_tag="VIC30_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006297780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY7805280.1"
                     /translation="EHEKEHARAMIQRILFLEGKPDLSKREGLNVGKDVPAMLKSDLA
                     VEYSVAKNLKAAIAECEKAGDFVTREALVTQLEDTEMDHAYFLEKQLRQIELMGLENY
                     LQSQL"
BASE COUNT          695 a          761 c          700 g          703 t
ORIGIN      
        1 taaaaccatc gatggtgtca acgaatggat tgctgcgggc ataccgttgc acactaccgc
       61 accacagcac cgcaccacag caccaccaca ccaatcgaac aaataaacaa gcaagccatc
      121 gcaattaacc aagaactagg agacaaatgt gaatgctgtt ttattgcccc aaaccacgaa
      181 caccaaacgg ccaagtctgc tgactgccgt tctcaccctt cttgccatgc tctgtctgtc
      241 cgtgatgctt gcgcctgccg cgcacgcaca aagcgaggct gctattgatg aaatggccgg
      301 ctatatggac ttcagcgaat acggcggtgg cgtgatattt gccgaacaga tccccaaaga
      361 agagtacgag aacatcatgg tgatcgatgc tcgcgatgcc gaccagttcg ccaaggacca
      421 catccccggt gcggtcaata ttgaatggcg ccaggtattg aacgaacgcg agaacctgcc
      481 cgatgacaaa atggtgcttc tctactgcaa caccggcacc ctgtcagctc aagcaggatt
      541 tgcgctacga gttgccggtc atgagaacgt gcgcatcttg caaggcggct ttgaagaatg
      601 gaaagccaaa ggtggattcg aggccaacgc ccgtgccact gaacaagcaa ccaaagacta
      661 agcagggtcg ggccagatgc ataccaaaga tcactgggac aagatctacg ccaccaagga
      721 cgttgactcg gtgagttggt atgccccgca tctggacaaa tcgctggcac tcatcgaggc
      781 gatttgtcca gacaaaacag ctgccatcgt tgacattggg gctggcgagt cgacgttggt
      841 cgacgactta ttgagtcgtg ggtatcagga tctatccgtg ctggatattt cccaaacagc
      901 tatcgaattt accaagcatc gtcttgattg ccttgatcgc cttggtgaga agtccaagcg
      961 cgtgaactgg catgtcggcg acataacccg atacgacttt ggtgccaaac agtttgactt
     1021 gtggcatgac cgtgcagtgt ttcattttct gacggatcaa gatgctcggg tagcgtatgt
     1081 ccaaacactg cgacgctctg ttaaacccgg tggtcatgtc ttgatggcca ccttcggacc
     1141 ggaaggacca ttgcaatgta gtgggctaga cgttgtccgg tacgacgaga agcaactcaa
     1201 agacgtgctc ggtgatgggt ttaagctgct aggcagtgaa ctgacaacac acttgacacc
     1261 gatggggagc gagcagcaat tcctatactg ctggttcgaa gtggttcgac catggcgagg
     1321 gtttcggttt caccgagaca tagacgctta atgggcgtac tttgcgtatt ttgtccaaag
     1381 caccaacagt tcaggtacgc actttttctt gaagccagac cttgatcaat gactgatacg
     1441 gtacatcccg agagtttgca gcaactttaa ttgtgttcaa tcgagtccag tcccggccaa
     1501 tcgcggccaa caaacgctag ggaaagcgac gctaaattgt ttttgtcgta ggtttcaagt
     1561 taggcaacgt cactttgtgg gccttgctcc aatcaagaaa cgctgtagag tcattactct
     1621 cccaaaacgc tcgctctgct gtctcagtct taaagctcgt gcggctagtg cggctaggaa
     1681 ttttcttggg cgcttttttc atagatagtc ctttgcgccc tagtctatcc atttctcggg
     1741 atgacattat ccaaagcggg agatcatggc ggctagcagc ctttatgcaa ccaatcctaa
     1801 gtcacccagt ttgccaaggc gcgccaaatt gcttagatca acctgctcac tcagcgcttt
     1861 gcgctcacgc aaacaccgct tagcatcgca agcgcactgg cagcaatctg cagcaacatt
     1921 cagttcacga cgcaaatcgc gtagcgatgt cgcaccacga tccaccgcct catgaatgtc
     1981 gcgttcagtt acaccagcgc agttgcatac gtacatgaca gtgccctaat ttatttaacc
     2041 ttcaatcatc ttcttcgacc tgagtctgca gatagttcgc cagccccatg gtctcgatca
     2101 gtgacaaccg tgtctcaagt tggtcaatgt tgtcttcaca ggactgcatc aaatcgcgca
     2161 gcatctcttc gctagcaaag tcatgcaatt cgcctgtgac cttgatggcg tcctgaatgg
     2221 ccacgtgctg agaggtcagc tcgtaattca gatcgccctt caatgcctcg tgcacgttct
     2281 caccgatttg cagcttgccc aagctttgaa gattcggtag tccctcgaga aacaggatgc
     2341 gttcgatgag tttgtcagac tccttcatga gcttgatcga ggttttgtag tgcgatttgt
     2401 ttaacccttc aaacccccag ttcgcgaaca tgcgggcatg caaaaaatat tggttgatgc
     2461 ccgttagctg gctttttaaa acagcgttta gagcggtgat gattttgcgg tcagctttca
     2521 tggtggttac ctggttacag ctggctctgg agatagttct ctaggcccat cagctcaatt
     2581 tggcgcaact gcttttccag aaaataggcg tgatccatct cagtatcctc aagctgagtc
     2641 accaacgctt cgcgcgtgac aaagtcgcct gccttctcgc attcagcaat cgccgctttc
     2701 aagtttttgg cgacgctata ctcaacggct agatcagact tcagcattgc gggcacgtct
     2761 ttgccaacat tcaagccctc gcgtttggac aaatccggtt tgccttcgag aaacagaatg
     2821 cgctgaatca tggcgcgcgc atgttccttc tcatgttct
//
LOCUS       DATBNL010000752         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_128778, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000752 DATBNL010000000
VERSION     DATBNL010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128778"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..827
                     /locus_tag="VIC30_12735"
     CDS             <1..827
                     /locus_tag="VIC30_12735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEY7805281.1"
                     /translation="TTAEEFLMSQVQQSSPASNARGMLGRDVTQAFWRALRSQMHPRM
                     IFALFLPFIVMMVLVIVLLWLGWGPLTDWLGDALSESAVPGAVDPVIGTTAFLALKAW
                     LIPVVAAFILLPLAGIGGLAVAAVWVMPLVLAHVGRRDYPDVDARGRHATAISVWNAT
                     WVSVLFVAGWLITMPLWLFPPLGLVVSLLLWTFAFNRMMRVDAVVDHASVQERQILWR
                     ERSAGFWVMGLVCSLINLIPPAWVFLPVFAGLVYAHFSFEALRQLRRDRTIEMDQA"
     gene            863..1732
                     /locus_tag="VIC30_12740"
     CDS             863..1732
                     /locus_tag="VIC30_12740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEY7805282.1"
                     /translation="MKQTEQEKTEQTEQTQDPTPRFGLVVVGDEILSGRRQDKHFPKV
                     IELLGERGLQLSWVRVVPDDREILTDALTQTFASGDEVLCCGGIGATPDDHTRQAAAA
                     ALGLPLGLHPEAEREITLRCADMAAKGQGTDDMSAPENQQRLQMGVYPVGAEIVPNPY
                     NRIPGFYISRHTFVPGFPVMAWPMLEQTLDTRYAAFHHPVVQDEWSFISYGVPEARIT
                     PALVAVQERWPGVRAFSLPSVGEDGQSPHIELGVKGPSEHLAASLAYLREQATALGAE
                     LLAPVSRKGTRIE"
BASE COUNT          391 a          514 c          622 g          532 t
ORIGIN      
        1 agacgactgc tgaagagttt cttatgagtc aagtgcaaca atcttctccc gcatcgaatg
       61 cgcgcggcat gctcgggcgc gacgtcacgc aagcgttctg gcgggcattg cgatcgcaaa
      121 tgcatccgcg catgatcttt gcgttgttct tgccctttat tgtgatgatg gtgcttgtca
      181 ttgtgctgct gtggttgggt tgggggccac tgaccgattg gttaggtgat gcactgtctg
      241 agtcagccgt gccgggcgca gttgatccgg tcattggcac aaccgcgttt ctagcgctca
      301 aggcatggtt gattccggta gtagctgcct ttattttgtt gcccctggcc ggtattggtg
      361 gcttggctgt ggccgcagtc tgggtcatgc cgttggtgtt ggcacacgtg ggccggcgcg
      421 actatccgga tgtagatgcc cgcgggcgtc atgccacggc catcagtgtc tggaatgcca
      481 cctgggtgtc agtgctgttt gtggcaggat ggttgatcac catgccgctt tggttgtttc
      541 cgccgctggg gttggtggtt agtttgctgc tatggacgtt tgcgtttaac cgcatgatgc
      601 gcgtggacgc cgtggttgat catgccagtg tgcaagagcg gcaaatcctg tggcgcgaac
      661 gcagtgcggg cttctgggtc atgggcttgg tgtgctcgct gattaacttg atcccaccgg
      721 cctgggtgtt tttaccggtg tttgctggct tggtgtatgc ccatttcagt tttgaggcgc
      781 tacgtcagtt acgtcgtgac cgcaccattg agatggatca ggcttaagcc gcgctttaaa
      841 caagattttg gaaacaataa gaatgaaaca aaccgaacaa gaaaaaactg aacagactga
      901 acaaacccaa gaccccacgc caaggtttgg gctggtggtc gttggtgacg agattctctc
      961 tggccgtcgt caggataagc attttcccaa ggtcattgag ttgttgggcg agcgtgggtt
     1021 gcagttgtcg tgggtgcggg tggtgccaga tgatcgtgag atcttgaccg atgcgttaac
     1081 gcaaaccttt gccagcggtg atgaggtgct gtgttgtggc ggtatcggcg ccacgcccga
     1141 tgatcacacg cgtcaggcgg ccgctgcggc actcgggctg ccattgggat tgcatcctga
     1201 ggctgaacgc gagatcacct tgcgttgtgc ggatatggct gccaaaggac agggcaccga
     1261 tgacatgagc gcaccagaga atcagcaacg actgcaaatg ggggtgtatc ccgtgggtgc
     1321 tgagattgtg cccaatccgt acaaccgcat tccaggcttc tacatttctc gtcacacgtt
     1381 tgtgccggga tttcccgtca tggcttggcc gatgcttgag caaaccttag atacccgtta
     1441 tgccgccttc caccatccgg tggtgcaaga cgaatggtct tttattagct acggggtgcc
     1501 tgaggcgcgt attacgccgg cgctagtggc agtacaagaa cgatggcccg gggttcgcgc
     1561 ctttagcttg ccttcagtgg gtgaggatgg tcaatcccca cacattgaac tcggtgttaa
     1621 aggtcctagc gaacatctcg ctgcgtcact ggcttatttg cgtgagcagg cgacggcgct
     1681 tggtgccgag ctgttggcac ccgtttcacg caagggcaca cgcatcgaat aggtgagttg
     1741 tatctagcta atatcgagca tcaagggtgg cagtgcttca tgtcttgcta accacagacc
     1801 gccaaccata gaccgcccat catagattgc cacttgcaat tgccacttgc attgtggttc
     1861 tatctttcat aatatgacat ggtatttgtt gcggtgccgc aattgtgcgt gctctcgcat
     1921 ccgactcagt gaatgctcat atgcagcgta atatcgactc ctcatcggct caagtaactg
     1981 aatcaggccc catggccatt caggtgattg agcgcgccac gcgcttgctt gatgccttgg
     2041 cgggcgaacg tgaaccagt
//
LOCUS       DATBNL010000753         2922 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_28961, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000753 DATBNL010000000
VERSION     DATBNL010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28961"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VIC30_12745"
     CDS             <1..379
                     /locus_tag="VIC30_12745"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7805283.1"
                     /translation="RFKRNFDRVRNRVELEQLLQKPLMQRGMLEWVEIFERHNVPCGP
                     IYTLDQVFEDVQVKHRGLKTELNHDSGAIVPSVDSPVRLSDTPVKLTASAPSLGSANE
                     TVLKHDLGLTDEQIQGLKNKGII"
     gene            complement(403..795)
                     /locus_tag="VIC30_12750"
     CDS             complement(403..795)
                     /locus_tag="VIC30_12750"
                     /inference="COORDINATES: protein motif:HMM:NF016156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEY7805284.1"
                     /translation="MNFNANSANSVWIFVCGLLGALGVALGAVAAHALADPQAALSVE
                     RATNYQLFHTVAILVLLTLKGRLITASRWLMLAGIIGFSGAIYAKYLLGLPALGALAP
                     VGGSLLILSWLVLGASAFTDRQATKSEP"
     gene            894..1373
                     /locus_tag="VIC30_12755"
     CDS             894..1373
                     /locus_tag="VIC30_12755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805285.1"
                     /translation="MQIEPAQASIAQSGVRSTSGRSISRGLLGVGVALLLAGCAGGNS
                     NNSPARTFEVDVPVKTAYERALAQTKMCLVTKDDFPLTSQIDADEAFAFVRVNMTLTD
                     KLLSNVRIVAQSPSRSRVSVQMWGVDVWDMSAVDAMQAAIEFGVPSCVNYFPSAPKQ"
     gene            1501..1917
                     /locus_tag="VIC30_12760"
     CDS             1501..1917
                     /locus_tag="VIC30_12760"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY7805286.1"
                     /translation="MALLATDDQVSYFGYHIPYLEHLGVEPVECQNDVAITRLPIKPH
                     LVNSRGHVHGGALMSVLDFTLSAAGRAHDLTGITMATIDMSTSFMSPGSTDLTITATC
                     THRGGSICFCEGEVRDAHQKLVAKASASFKMLKVDR"
     gene            1910..2371
                     /locus_tag="VIC30_12765"
     CDS             1910..2371
                     /locus_tag="VIC30_12765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEY7805287.1"
                     /translation="MVDMSLKQTISDEVKLAMRAKDSARLSTLRFLQAAIKQREVDDQ
                     QELNDAQVTAILEKQIKQRRESIAAYEQAGRTETADQEKAEIAVLQAFLPQAASAEEV
                     TAAISAAIEQAKADGAQGPAVMGKVMATLKQSLAGRADMSAVSKQVKEMLA"
     gene            complement(2381..>2922)
                     /locus_tag="VIC30_12770"
     CDS             complement(2381..>2922)
                     /locus_tag="VIC30_12770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEY7805288.1"
                     /translation="DALVTHRRQGLWQAAVPRRAHDLLAPLDSSAQSATDLPAPSERD
                     TLRMDYQSLGYTLGRHPLSFMREDLRAQRYRDSQDLQSAHHGQLVRACGLVTLRQRPH
                     TARGVMFITLEDEHGHINVVIQPHLIERERTLLLSSVLLGVVGTWQTDGRVAHLLAGR
                     LVNENARLTCLDALPRRRA"
BASE COUNT          738 a          766 c          785 g          633 t
ORIGIN      
        1 tcgatttaaa cgaaattttg atcgggtcag aaaccgcgtt gagttagaac aactcctcca
       61 gaagccccta atgcagcgcg gcatgctcga gtgggtggaa atatttgagc gtcacaacgt
      121 accgtgtggc cctatctaca cgctagacca agtgtttgag gatgtgcaag tcaagcaccg
      181 tggccttaaa accgaattga atcacgacag tggtgcgatc gtacccagtg tcgatagccc
      241 tgtgcgattg tctgacacgc cagtgaaatt aaccgcttca gcaccatcac ttggtagcgc
      301 gaacgaaacc gtgcttaaac acgatcttgg cctgaccgat gagcaaatac agggtttaaa
      361 aaacaagggg attatctgag ctgtcagctg actcgtggtg cgctatggct cagatttggt
      421 ggcttggcgg tcggtgaagg cgcttgcgcc tagcaccagc cacgacagaa tcaacagact
      481 gccgcccaca ggcgcaagcg cccctaacgc gggcagtcca agtaggtact tggcatagat
      541 ggcgccgcta aacccgataa tgcctgccaa catcagccaa cgcgatgcgg taatcagacg
      601 cccctttaag gttagaagca ctaaaatggc gactgtgtgg aacagttgat agtttgtggc
      661 tcgctcaact gatagcgccg cttgtggatc agccaaggcg tgcgcggcaa ccgcacccaa
      721 agccacacct aatgcgccaa gcaggccgca aacgaatatc caaaccgaat tagcggaatt
      781 agcgttaaag ttcatggcgg caagcgtagc atggcatcac gctggttgat ttgatttaga
      841 tagaatcaga tgagtcacat gcttacactg ctttgatttg ataaggaatt tacatgcaga
      901 tagaaccagc gcaagcatca attgctcagt ccggtgtgcg atcgacatcg ggacgatcaa
      961 tttctcgggg gctactaggg gtgggcgtgg cactactgct tgctggctgt gccggcggca
     1021 attcaaataa ttcaccagca cgaacctttg aagtcgatgt gcccgtaaaa accgcttacg
     1081 aacgcgcgtt ggctcaaact aagatgtgcc tagtgaccaa agatgatttc ccgctgacgt
     1141 ctcaaattga cgccgatgag gcgtttgcgt tcgtgcgggt gaacatgacc ttgaccgaca
     1201 agctgttgtc gaacgtgcgc atcgttgctc agtcgccatc acgctcgcgc gtaagcgtac
     1261 agatgtgggg cgtcgatgtc tgggacatga gcgcggttga tgcgatgcaa gcggccattg
     1321 agtttggtgt gccaagctgc gtgaactatt tcccgtcagc gcctaagcag taatacatgc
     1381 tttgcaccaa agatcaatgg tgcagaagat aggcgcagaa tcacacagcc acacagcaat
     1441 attagagttt gcacttatta acaaaacaca acacttttat cttaggaaac ttccacaccc
     1501 atggcactgc tcgcaaccga tgatcaagtc agctattttg gttaccacat tccgtacctt
     1561 gaacacttag gcgttgaacc tgttgaatgt caaaacgatg ttgccatcac ccgcttacca
     1621 atcaagcccc atttggttaa cagtcgaggc catgtgcacg gtggggcgct aatgagcgtg
     1681 ctggacttta ccttgtcagc tgccggacgc gcgcacgacc taaccggcat caccatggcc
     1741 accatcgata tgtccacgag ctttatgtca ccaggctcga cagacctaac gattaccgcc
     1801 acctgtacgc accgtggcgg ctcgatttgt ttttgtgagg gtgaggtgcg tgatgctcat
     1861 caaaagcttg tagccaaggc cagtgcttct ttcaaaatgc ttaaggtaga tcgttgatat
     1921 gtctttaaaa caaaccatct ctgacgaagt gaaactggcc atgcgcgcca aagacagcgc
     1981 acgtttgtcg acgctgcgtt ttttacaggc agccatcaaa cagcgcgaag tcgatgacca
     2041 gcaagagctg aatgatgcgc aagtcactgc catcctagaa aagcagatca agcagcgccg
     2101 tgagtcgatt gccgcttatg agcaggctgg tcgtaccgag acagcagacc aagaaaaagc
     2161 ggaaattgcc gtgttgcaag cgttcttgcc gcaagcggcc agtgccgaag aagtcacggc
     2221 ggccatttct gcggccatcg agcaggccaa agccgatggt gcccaaggac cagcggtcat
     2281 gggtaaggtc atggcaacgc ttaagcaatc tttggctggt cgcgccgaca tgagtgcggt
     2341 gtcaaagcaa gttaaagaga tgctcgcgta ggtactgcaa ctaagcacga cgtctaggca
     2401 gcgcatccaa gcaggttagc cgggcgttct cattgacgag gcgcccggct aaaagatgcg
     2461 ccacgcggcc atcggtctgc catgtgccta ccacaccaag caacacgctg ctgagcaaca
     2521 aggtgcgttc gcgttcaatc aggtggggtt gaatcacgac attgatatgg ccgtgttcat
     2581 cttcaagcgt gataaacatc acaccacggg cggtgtgtgg gcgctggcgt aaagtcacta
     2641 gcccacaggc gcgcaccagt tgaccgtggt gagcgctttg caagtcttga ctatcccgat
     2701 agcgttgggc gcgcaaatcc tcacgcatga aactcaacgg atgccgaccc aaggtgtaac
     2761 cgaggctttg gtagtccatg cgcaaagtat cacgctcgga tggtgccggc aggtcggtag
     2821 cgctttgtgc acttgaatcc agcggtgcca gtaaatcatg cgctcgtctt ggcacagccg
     2881 cttgccacaa accttgtcgt cgatgtgtca ccaacgcatc ca
//
LOCUS       DATBNL010000754         2074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_78704, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000754 DATBNL010000000
VERSION     DATBNL010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78704"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..367)
                     /locus_tag="VIC30_12775"
     CDS             complement(59..367)
                     /locus_tag="VIC30_12775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007831606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2160 domain-containing protein"
                     /protein_id="HEY7805289.1"
                     /translation="MFDWMVWTTPVAIFFICIAAMLAVMTVLEVKRPTTPRKGFLPMV
                     TTRGDRLFIGLLIAAYINLIFLGMAGHIAQWLSMYEEPSIWWGFGLSVIWFITVMRKG
                     "
     gene            complement(387..1199)
                     /locus_tag="VIC30_12780"
     CDS             complement(387..1199)
                     /locus_tag="VIC30_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY7805290.1"
                     /translation="MFKSLLTGKNLFLFLYLLFALLPIYWMINMSLKTNNEILSSFSL
                     WPEDITFENYYKIFTDPTWYSGYINSIIYVAINTVITLTVALPAAYAFSRYRFIGDKH
                     IFFWLLTNRMTPPAVFLLPYFQLYTTLGLMDTHLAVALAYLVFNIPLAVWILEGFMSG
                     VPREIDETAYVDGYSFPKFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVDA
                     KPIAATMTRTVSASGMDWATLAAAGVLTIVPGAIVIRFVRNYIAKGFAMGRV"
     gene            complement(1204..>2074)
                     /locus_tag="VIC30_12785"
     CDS             complement(1204..>2074)
                     /locus_tag="VIC30_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017407901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY7805291.1"
                     /translation="KPSNQKAWLLIMPVLICVAFSAILPLMTVINYSVQDIISPTRRV
                     FVGTEWFAMVMRDSELHEALGRQIFFSLSVLAVQIPLGVALALCMPASGWKASATLVL
                     VALSLLIPWNVVGTIWQIFGRTDIGLLGHTLQQMGVDYSYTGNPSHAWITVLVMDVWH
                     WTPLVALLAYAGLRSIPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDS
                     FMIYTEPFVLTGGGPGNSTTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLFCFVLY
                     NWMQNVGKSQQQG"
BASE COUNT          601 a          521 c          512 g          440 t
ORIGIN      
        1 ccttcgtgtt ttagcgtccg acctcgggaa caacagtcgg cgttcttgta aagcttgact
       61 aaccttttct catgacggtg ataaaccaaa tgaccgacag tccaaatccc caccagattg
      121 atggctcctc gtacatcgag agccactggg caatgtgacc ggccatccct aaaaaaatta
      181 aattgatgta agccgcaatc aataagccga taaaaaggcg atcacctcgg gtcgttacca
      241 ttggtaagaa cccctttctg ggtgtggtgg gtcgtttgac ttcaagcact gtcatcaccg
      301 ccagcatggc agcaatgcaa atgaagaaga tggcaacagg cgttgtccaa accatccagt
      361 cgaacatcat cgtctccttg attctcttag acccgaccca tcgcaaaacc ttttgcgatg
      421 tagttacgta caaaccggat cacaatggcg cctggaacga tggtcagaac gccagcggct
      481 gcaagcgtgg cccaatccat gccagaggca ctgactgttc gcgtcatcgt ggccgcaatc
      541 ggtttggcat caacactcgt cagtgttcgc gccaacagca gttccaccca actgaacatg
      601 aaacaaaaga aagctgccac accaacgcct gccttgatca gtggcaagaa gatggtcagg
      661 aagaatttcg gaaagctata accatccaca tacgcggttt cgtcgatttc gcgcggaacg
      721 ccgctcatga agccctcaag aatccagact gctagcggta tgttgaatac caaatacgcc
      781 aaggcaactg ccaagtgcgt gtccatcagt cctagcgtgg tgtaaagctg gaaataaggc
      841 aataaaaaca ccgcaggtgg cgtcattcgg ttggtcagta gccagaaaaa gatatgtttg
      901 tcaccgataa accgatagcg gctaaatgca taggctgctg gcagcgcgac ggtcaatgtg
      961 atgacggtat tgattgccac gtagatgatg ctgttgatgt agcctgaata ccaagttgga
     1021 tccgtgaata tcttgtagta gttttcaaag gtaatgtcct caggccaaag tgagaacgag
     1081 gacaggatct cattgttggt ctttaagctc atgttgatca tccagtagat gggcaacagt
     1141 gcaaaaagca agtacagaaa aagaaacaga ttcttgccgg tcagcagtga cttgaacatg
     1201 gcattatcct tgctgctgtg acttgcccac gttctgcatc cagttataga ggacaaagca
     1261 gaacagcaag atgatgagga aataaatgag tgaaaaagcg gcggccggac caaggtcaaa
     1321 ttgaccaacc gctttctggg tcaggtactg cgacagaaag gtcgtggagt ttccagggcc
     1381 accgccagtc agcacaaatg gctcggtata aatcatgaag ctatccatga atctgagcag
     1441 aactgcaatc atcagcacac cacgcatttt gggtagctgg atgtagcgaa acaccgcaaa
     1501 tttgctggct ccgtcgatcc gggcggcttg gtagtaagca tcggggatag agcgcaaacc
     1561 ggcatatgcc agcagtgcga ctaagggcgt ccaatgccag acatccataa ccagtaccgt
     1621 gatccaggcg tgagatgggt tgccggtata gctatagtcg acccccattt gttgcagggt
     1681 gtgacccaac agaccaatgt cggtacgccc aaaaatttgc cagatggttc caaccacatt
     1741 ccacggtatg agtagtgaca aagccaccag aaccaaagtg gccgaagctt tccaaccgct
     1801 tgctggcata cacagagcca acgccacgcc cagaggaatt tgcaccgcta acactgacaa
     1861 agaaaaaaag atctgacgac cgagtgcttc gtgtaattcg ctgtcacgca tcaccatggc
     1921 aaaccactcg gtgccaacaa agacgcgacg tgtgggtgaa atgatgtcct gtaccgaata
     1981 gttaataaca gtcatcagcg gcaaaatcgc agaaaacgcc acgcaaataa gcactggcat
     2041 gatcaacaac caagccttct ggttcgatgg ttta
//
LOCUS       DATBNL010000755         3494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_38519, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000755 DATBNL010000000
VERSION     DATBNL010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38519"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..849
                     /locus_tag="VIC30_12790"
     CDS             <1..849
                     /locus_tag="VIC30_12790"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010930557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HEY7805292.1"
                     /translation="EAGVRSLEREISKICRKVVKKLVANVPVGTSRAAARKASKAAAI
                     KDQVVVSSANLNDYLGVRRFAFGMAEKDNQVGQVTGLAWTEVGGDLLTIEVADMSGKG
                     NVLRTGSLGDVMKESVEAARTVVRSRARRLGIEGTVFEKRDMHVHVPEGATPKDGPSA
                     GIAITTAIVSALTSIPVRADVAMTGEITLRGEVLAIGGLKEKLLAARRGGIKTVLIPE
                     ENVKDLAEIPDTVKNHLEIIPVKWIDKVLEVALEKQPKPLPEEPLPEVVSKPAATDNS
                     DPVIKH"
     gene            867..1262
                     /locus_tag="VIC30_12795"
     CDS             867..1262
                     /locus_tag="VIC30_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005674213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEY7805293.1"
                     /translation="MQEPAQGVRIDKWLWAARFFKSRSLANEAIELGRVHINGDRVKP
                     ARLVKIGEKVRVQRGTERIEVFVRFLSDVRRSAPLAKLLYDETIESLAARQEAAERRR
                     LYSEPARGITGRPTKRNRRAIERFASDEG"
     gene            complement(1316..2011)
                     /gene="lexA"
                     /locus_tag="VIC30_12800"
     CDS             complement(1316..2011)
                     /gene="lexA"
                     /locus_tag="VIC30_12800"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041937182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEY7805294.1"
                     /translation="MANKLTSRQTEILSLIEHAISETGFPPTRAEIAQTLGFKSANAA
                     EDHLRALEKKGYISLTPGASRGIRLLQADLDEPSDGPLQNIVQKAAQKAAQKTRQIAS
                     ALTLPVIGRVAAGAPILATENVARELAVDPALFDKAPDYILQVRGESMKDIGILDGDL
                     LAVKKTAEARSGQIVVARIDDDVTVKRLVRESNRVVLEAENPDFKPIVVTDANRFAIE
                     GIAVGLIRTGSLH"
     gene            complement(2237..3442)
                     /locus_tag="VIC30_12805"
     CDS             complement(2237..3442)
                     /locus_tag="VIC30_12805"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019247244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HEY7805295.1"
                     /translation="MSTLFEAVELAPRDPILGLNEQYNADERPGKVNLGVGVYYDDQG
                     RVPLLKCVHQAEVDRVKAAAAHGYLPIEGLKTLNTAARELVLGKGAQAIESERAFTIQ
                     AVGGTGALKIGADYLKQLLPQAKVAISSPSWENHRALFERAGFEVVEYAYYDPQTHGL
                     NLQGMLDSIAALPAGSVVVLHACCHNPTGVDPTPAQWDQIIEAMKAGKHVPFLDMAYQ
                     GFGDGLAEDASTVRKFVDAGLTCLISTSFSKSFSLYGERIGALTVVTDSADQAKRVLS
                     QIKRVIRTNYSNPPTFGGAVVAEVLNNTELFALWESELAEMRSRIKDMREQLVTKLKT
                     AGVPTDFDFVLAQKGMFSYSGLTAAQVDVLREQHGIYAVGSGRICVAALNSGNIDTVA
                     NAIAAVLKG"
BASE COUNT          788 a          878 c         1021 g          807 t
ORIGIN      
        1 gaagcaggtg tgcgttcgct tgaacgtgaa atcagcaaaa tctgccgcaa ggttgtcaag
       61 aaactcgtgg ccaatgtgcc ggtaggcact tcgcgtgcgg ccgcacgcaa agcctctaag
      121 gcagcggcca tcaaagacca agtggtggtt tctagcgcaa acctcaatga ctatcttggc
      181 gttcggcgtt tcgcctttgg tatggcagaa aaagataacc aagttggtca agtcacgggt
      241 ctggcttgga ctgaggtcgg tggtgattta ctgaccatcg aggtcgcgga catgtccggt
      301 aagggcaatg tgctgcgtac tgggtcgcta ggtgatgtga tgaaggaatc ggttgaagcg
      361 gcacgcacgg ttgtacgctc gcgcgctcgt cggcttggca tcgaaggcac ggtgtttgaa
      421 aagcgcgaca tgcacgtgca cgtgcccgaa ggtgcgacac ccaaagatgg tccttcagcc
      481 ggtattgcga tcaccacggc gattgtgtca gcgctgacgt caatacccgt gcgtgcggat
      541 gtggccatga ccggtgaaat cactttgcgt ggcgaggtgc tggcgatcgg cggcttgaaa
      601 gagaagctgt tggcggctcg ccgtggcggt atcaagaccg tgttgattcc cgaggaaaac
      661 gtcaaggatc tggctgaaat tcctgataca gttaaaaacc accttgaaat cattcctgtg
      721 aagtggatcg ataaggtgct tgaagtggcc ttggaaaagc aacccaaacc attgcctgaa
      781 gaacctctac cagaggtggt cagcaaaccc gctgccactg acaattccga tccggtgatt
      841 aagcactagt attggaggac gccggtttgc aggaaccagc gcaaggcgtg cgaatcgata
      901 agtggctatg ggcggcgcga ttttttaagt cgcgctcgct cgccaacgag gcgatagaac
      961 ttggccgtgt gcacatcaat ggcgaccgcg tcaagcctgc ccggctcgtc aaaatcggcg
     1021 agaaagttcg ggtacaaaga ggcacggagc gcatcgaagt atttgtgcgt tttcttagcg
     1081 atgtcagacg ctcagccccg ctagccaagt tgctatacga cgaaaccatc gagagtttgg
     1141 ctgccagaca agaagccgct gaaaggcgca ggctctacag tgaacctgca agagggatta
     1201 cgggtcgacc aactaagcgc aacagacgag ccattgagcg ttttgccagt gatgagggct
     1261 agagaggacc atgggcttgg gacttcggcc tactgcctgc ggcctctccc ctgacttagt
     1321 gcaagctgcc tgttctgatc agacccacag cgataccttc aatggcaaag cggtttgcat
     1381 cggtaaccac gatcggttta aagtcagggt tttctgcctc gagcacgact cggttgcttt
     1441 cgcgcaccaa gcgcttgaca gtgacgtcat catcgatacg tgccaccaca atttgcccag
     1501 atcgggcttc cgcggttttt ttgactgcaa gcaagtcacc gtctaggatg ccaatgtctt
     1561 tcatgctttc gccacgaact tgcaagatgt agtcgggtgc cttgtcaaac aaggcggggt
     1621 ccacagctaa ctcacgtgca acattctcgg tagcaaggat aggggcaccg gcggctaccc
     1681 gaccaatgac gggcagcgtt agtgctgagg cgatctgacg ggttttttgt gcggcttttt
     1741 gcgcggcttt ttgtacgatg ttttgtaatg ggccatcgct tggctcgtct aaatcggcct
     1801 gcagcaggcg aatgcctctt gaggcaccgg gcgtcaagct gatgtagcct ttcttttcaa
     1861 gggctcgcaa gtggtcttca gcggcgttgg ctgacttgaa accaagcgtt tgggcaattt
     1921 ctgcgcgcgt tggggggaac cccgtttcac tgatggcgtg ctcgatcaga gacaggattt
     1981 ctgtttgccg agaagtaagt ttgttagcca tgagtgcctc tgtgctgtac ggatatacag
     2041 cattgtgacg caaactaacc aatagtgcaa gcaaattgca gcaaaaatca gcaaaacaag
     2101 ttgctggagt aggtttgaac gatgttcgaa agccttgtgg ggaggggagt taaggattgt
     2161 taatgacgta ttgggaataa gggaagggga atgagggagg gggctcagcc ccggtccctt
     2221 attccacgcg cagccattag cctttcagta ccgctgcgat ggcgttggcc actgtatcga
     2281 tattgccgct attgagtgct gccacacaaa tgcggccgct acccacagcg tagatgccgt
     2341 gttgctcacg cagcacatca acttgtgctg cagtcaatcc ggaataagag aacatgcctt
     2401 tttgcgccag cacgaaatca aagtccgtcg gtacaccagc ggtctttagt ttggtgacaa
     2461 gttgctcgcg catgtcttta atgcggctgc gcatctcggc aagttctgac tcccagagag
     2521 cgaacaattc agtattgttg agcacctcgg ccacgactgc accgccaaac gttggcgggt
     2581 ttgagtaatt ggtgcggata acccgcttga tctggctaag cacgcgtttg gcttgatccg
     2641 cactgtccgt gaccacggtt agcgcaccga ttcgctcgcc atacagtgag aaagattttg
     2701 agaaggaggt gctgatcagg caagtcagac ccgcatcaac aaacttgcga acggttgagg
     2761 catcttcggc taatccgtca ccgaagcctt gataggccat atccagaaag ggcacgtgtt
     2821 tgccagcttt catggcctcg atgatttggt cccactgtgc cggcgttgga tcgacaccag
     2881 tggggttatg gcagcaggca tgtaatacca ccacgctgcc agcaggcagg gcagcgatcg
     2941 agtcaagcat gccctgaagg tttaagccgt gggtttgtgg gtcgtagtaa gcatattcga
     3001 cgacttcgaa gcctgcgcgc tcgaacaatg cgcggtggtt ctcccagcta ggcgagctga
     3061 tcgctacctt cgcttgaggt aacaactgtt ttaggtagtc agcaccgatc ttcagtgcgc
     3121 cggtgccgcc gacggcctga atggtgaacg cacgctcaga ctcaatggct tgggcgcctt
     3181 tgcctagcac cagttcccgg gcggcggtgt tcagggtttt aagaccctcg atcggcaaat
     3241 aaccgtgtgc ggcagctgcc ttgacgcggt caacttcagc ctggtgcaca catttgagca
     3301 gaggcacgcg gccttgatcg tcgtaataaa cgccaacgcc caagttcact ttaccaggac
     3361 gctcatcggc gttgtattgc tcatttaggc caagaattgg gtcgcgtggg gcgagttcaa
     3421 cagcttcaaa aagtgtgctc attcagttaa aacctatttg ggtcttgttc caaggtgtgt
     3481 cgaaggttgt cagt
//
LOCUS       DATBNL010000756         2076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_59058, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000756 DATBNL010000000
VERSION     DATBNL010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59058"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1107)
                     /locus_tag="VIC30_12810"
     CDS             complement(<1..1107)
                     /locus_tag="VIC30_12810"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008252010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HEY7805296.1"
                     /translation="MTIFEQRESNIRAYARTYPTVFVTAKNARQIDEDGKEYIDFFAG
                     AGVLNFGHNNPHMKAAMIDYLQKDGVLHSLDMQTQAKAQFMQKFTDVILKPRNMPHRM
                     QFMGPTGTNAVEAAMKLARNATGRHNIVAFSQGFHGMTLGALAATANEYFRQASGVPL
                     LHVSHELFDQEHDHEAALAALDALGHQYRDPSSGIKPPAAFMVETIPAEGGVNVASKE
                     WMQKLEKLAKEFGSVLIVDDIQVGCGRTGSYFSFDDMGINPDIITLAKGIGGAGTPMA
                     MNLVHPDLDKHWSPGEHTGTFRGQNLSFVAGEVALRYFEDDKLMSEVSEKVNTVRHAL
                     EPLVSEHSAKELRGKGLILGLDMGSGDVAAKVVQR"
     gene            complement(1165..>2076)
                     /locus_tag="VIC30_12815"
     CDS             complement(1165..>2076)
                     /locus_tag="VIC30_12815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008252012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY7805297.1"
                     /translation="QGCMHACGHDGHTATLLATARWLKHFETELPQPVVLIFQPAEEG
                     LHGAREMIKDGALENVGAIYGWHNWPALPYGTMACPDDIVMCGNGTFNMIFKGRGGHA
                     SQPELCADPILAASAVNVALQQIVSRRLAPQATAVISVTQIHGGTAPTVIPETATLSG
                     SIRVPDEDTRQQLNQHISEVATYTAAAYGVKCTIEHDMRYQATINHKEQATRARKEWQ
                     SLYGEPALDHGQALPIMASEDFSYYLQAVPGAFALIGSNDGDAHSVACHSPHYDFNDR
                     LIADVCRWFCQLAGLADQSLPKHSLEE"
BASE COUNT          455 a          523 c          548 g          550 t
ORIGIN      
        1 gcgttgcact accttggcgg ccacgtcgcc gctgcccatg tcgagaccaa ggatcaaacc
       61 tttgccacgc agttctttgg cgctgtgttc gctcactaaa ggttccagtg catggcggac
      121 ggtattcact ttttctgaga cttccgacat tagcttgtcg tcttcaaagt aacgtagggc
      181 gacttccccc gcgacaaacg acaagttttg tccacggaag gtgcccgtgt gttcgcctgg
      241 tgaccaatgc ttatccaaat ctggatgaac caagttcatc gccatcggtg tgcctgcgcc
      301 gccaatgcct ttggccaagg taatgatatc ggggttgatg cccatgtcat caaagctgaa
      361 ataagacccc gtacgaccgc aacccacttg aatgtcgtca acgatcaata cagagccgaa
      421 ctctttggcg agtttttcta atttctgcat ccactcttta ctggcgacgt tgacaccgcc
      481 ttctgctggg atggtttcga ccataaaggc cgctggtggc ttgataccac tggatgggtc
      541 acggtactga tgacctaagg catctaatgc tgcgagagcg gcttcatgat cgtgctcttg
      601 gtcaaacaac tcatggctga catgcaataa aggtacgcca gaggcttgac ggaaatactc
      661 gttggccgtt gcggctaatg cgcccaatgt catgccgtga aaaccctgac taaaggcgac
      721 aatgttatgg cgtcccgtgg cattacgagc cagtttcatg gcggcttcta ccgcattggt
      781 gccggttggt cccataaact gcatgcgatg gggcatgttt ctgggtttta aaatcacgtc
      841 ggtaaatttc tgcataaact gcgctttggc ttgagtttgc atgtccaaac tgtgcaatac
      901 gccgtccttt tgcaaataat cgatcatggc ggctttcatg tgtgggttgt tatgcccaaa
      961 gttaagcacc ccagcacccg cgaagaaatc aatgtattcc ttaccgtctt cgtcaatttg
     1021 acgggcgttt tttgccgtaa caaaaaccgt tgggtacgtg cgagcgtaag ctcgaatatt
     1081 ggattctcgt tgttcgaaaa tagtcataac gcctcctatc aacctctgtt tacagcggtt
     1141 gttggttcgt gtttttttgg gttgttactc ttctagtgag tgcttaggta gtgattgatc
     1201 ggcgaggcct gcgagttggc agaaccaacg gcagacatcg gcaatcaatc tatcattgaa
     1261 atcgtaatgt ggactgtggc aagccacact gtgcgcatcg ccatcattgc tgccaattaa
     1321 ggcaaaggca cccggaacgg cttgtaggta atagctaaaa tcttctgatg ccatgattgg
     1381 cagagcttgc ccatgatcta gtgcgggttc gccgtacaac gactgccact cttttcgagc
     1441 tcgggtggct tgctctttat gattgatagt cgcctgataa cgcatgtcat gttcaatcgt
     1501 acacttcaca ccataggcgg ccgcggtata ggtggccacc tcggaaatgt gttggttgag
     1561 ctgttgacgg gtatcctcgt caggaacacg aatactgccg cttaacgtcg ccgtttctgg
     1621 aatcaccgtt ggcgcagtgc cgccgtgtat ttgcgtgaca ctgatcacgg cggtggcttg
     1681 tggggcaaga cgacggctga cgatttgttg taaggctaca ttgaccgcgc tggcggccag
     1741 aatgggatct gcacacagtt ctggttggct agcgtgacca ccgcgacctt tgaatatcat
     1801 attgaaggtg ccattaccgc acatgacaat gtcgtcaggg cacgccatgg tgccataagg
     1861 cagggcaggc cagttgtgcc agccataaat cgcgccgacg ttttctaacg cgccgtcttt
     1921 gatcatttcg cgagcgccat gcaagccttc ttcggctggc tgaaaaatca gcacaaccgg
     1981 ttgggggagt tctgtttcaa agtgttttaa ccaacgtgct gttgctagca aggtggcggt
     2041 gtgtccatcg tgaccacaag cgtgcatgca gccttg
//
LOCUS       DATBNL010000757         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29038, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000757 DATBNL010000000
VERSION     DATBNL010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29038"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1809)
                     /locus_tag="VIC30_12820"
     CDS             complement(<1..1809)
                     /locus_tag="VIC30_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006393466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEY7805298.1"
                     /translation="MKRMLFNATHQEELRVAIVDGQKLVDLDIETAGREQRKGNIYKG
                     VITRIEPGLEACFVNYGEDRHGFLPFKEVARAFFKEGVDVRSARIQDALREGQELIVQ
                     VEKEERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRVEGDERQELRQAMDQLDVP
                     QGMSIIARTAGIGRTTEELQWDMAYLLQLWGAIDGAATSNPAPILIYLESSLVIRAIR
                     DYFSPDIGEILIDTDDIADQATAFMSVVMPDNVQRVKRYRDDVPLFSRFQIEHQIETA
                     YSRHVDLPSGGSIVIDHTEALVAIDVNSARATRGADIEETATRTNLEAAEEAARQLRL
                     RDLGGLIVIDFIDMEETRNQRAVEQRLRDALHVDRARVQMGKISRFGLIELSRQRLRP
                     ALSEGSHVTCPRCNGTGVIRDAESSALHVLRLLQEEAMKENTAGVHAQVPVEVATYLL
                     NEKRTDITKMEARLKVNLLLIPNKHLDTPHHIIERLRHDDPRLEETKASFEMLEEPTS
                     VDMSAATRGDKEIKAKPEALVKGVTPSQPAPPAAVKTPAPEKTVAAKTESSGLWGQIV
                     SFFSGIFGEPAKTTTQTTETKPAQSRSSNRRGGTNNR"
BASE COUNT          379 a          520 c          568 g          493 t
ORIGIN      
        1 gcgattgttc gtgccgccgc ggcggttcga tgaacggctt tgcgctggtt tggtttctgt
       61 cgtttgcgtc gttgtcttgg cgggttcacc gaagataccg ctaaagaagc taacaatttg
      121 accccaaaga cctgacgatt ccgtcttggc agcaactgtt ttttctggtg caggggtttt
      181 aactgcggct ggcggagctg gttgagatgg cgtgacacct ttgactagcg cttctggttt
      241 ggccttgatc tctttgtcgc cacgggtagc ggcgctcatg tctactgatg taggctcttc
      301 gagcatctcg aaactggcct tggtttcttc aaggcgcgga tcgtcatggc gaagtcgttc
      361 gatgatgtgg tgcggcgtgt caagatgctt gttcggaatc aacagcaaat tgactttgag
      421 gcgagcttcc atcttggtga tgtcagtgcg cttctcgtta agcaagtagg tggcgacttc
      481 gactggcacc tgggcatgca cgccggccgt gttctctttc atggcctctt cttgcaagag
      541 gcgcagcacg tgtagcgcac ttgattcggc atcgcgaatc acaccagtgc cgttacagcg
      601 tgggcaggtg acatgtgagc cttcgctaag cgccgggcgc aagcgttggc gcgatagctc
      661 aatcaaacca aagcgcgaga ttttgcccat ctggacacgg gcacggtcga catgcaaggc
      721 atcgcgtagg cgttgctcga cagcacgctg attgcgtgtc tcttccatgt caatgaagtc
      781 gattacgatc aatccaccca agtcgcgtaa ccgtaattga cgcgcggctt cttcggcggc
      841 ttctaggttg gtgcgagtcg ctgtttcttc gatgtctgcg cctcgcgtgg cacgcgccga
      901 gttgacgtcg atggcaacga gtgcttcggt gtggtcaatc acaatcgagc caccggaagg
      961 aaggtcgaca tgacgtgagt aggccgtctc gatctggtgt tcaatctgaa agcgtgagaa
     1021 caggggcaca tcgtcgcggt agcgtttgac gcgctgaacg ttgtcaggca tcaccacgct
     1081 catgaaggcg gtggcttgat ccgcaatatc gtcggtgtcg atcaggatct cgccaatgtc
     1141 gggcgagaag tagtcacgga tggctcggat gactaggctg gattctaggt agatgagaat
     1201 cggtgcgggg tttgaggtgg ccgcaccatc aatggcaccc cagagctgca agaggtaagc
     1261 catgtcccat tggagttctt cggttgtgcg accaatgcct gcggttctgg caatgatgct
     1321 catgccttgt ggcacatcga gctgatccat cgcttggcgc agttcctgac gctcgtcacc
     1381 ttcgacacgt cgcgacacgc caccaccacg cgggttattt ggcatcagca ccagatagcg
     1441 cccggccaat gagatgaagg tcgtaagcgc cgcccctttg ttgccacgct cttctttttc
     1501 tacttggacg atgagttctt ggccttcacg cagcgcatct tggatgcgtg ctgatcgcac
     1561 gtccacgcct tctttaaaga aggcacgggc cacttctttg aagggcagaa aaccatggcg
     1621 gtcttcaccg tagttcacaa agcaggcttc aaggcctggt tcaatgcggg tgataacgcc
     1681 tttgtagatg ttgcctttgc gctgttcgcg cccggccgtt tcgatgtcaa ggtcaacgag
     1741 cttttgcccg tcaacaatcg ccacgcgcaa ttcttcttgg tgcgtggcat taaacagcat
     1801 gcgtttcatt caaattctcc gtaggttggt gcaatcagtg attgcacagc ctaggcagac
     1861 tgaatctgac ctacttaaaa cgcacactcg cccaccttgc gatgggcgtt aacccgtcaa
     1921 gttgaccggc tccctctagg agccgtgttt ccgcgaacta
//
LOCUS       DATBNL010000758        10139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_18794, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000758 DATBNL010000000
VERSION     DATBNL010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 10139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10139
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18794"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VIC30_12825"
     CDS             complement(<1..338)
                     /locus_tag="VIC30_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015014125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY7805299.1"
                     /translation="MSDYQALASQISAKLKTFRTDIPDTMKGFSQMAGATHADGALTA
                     KNKELMAMAIAIAMRCQGCLAFHAQACHKMGVTQEEFNEMLQVAIYMGGGPSVMTAAE
                     AQIAFDQFAA"
     gene            complement(416..1690)
                     /locus_tag="VIC30_12830"
     CDS             complement(416..1690)
                     /locus_tag="VIC30_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019560282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805300.1"
                     /translation="MKPTLLNPGVSRLEVFGWALYDFANSGYTTVVLTAVFSAYFVSV
                     VVGEATLGTLLWTVTLSLSHLVVMLTIPLIGARSDRIERRRGLLAMTTIGCVVCTAAL
                     AWAGPGSVVLAMVLVLFSNMFFSWGESLISSYLPTLARPHAMGRVSGWGWGLGYIGGM
                     FTLGICLAYVLHAQSAGQSAQAFVPVTMIMTATVFAAAALISISLLKDRPGSAGDVSP
                     AWQRLRETWQHARDYRDFVWLLACTVAYMAGVAVAIALAAIYAQQVIGFTETEIMILI
                     FVLNIAAVIGALMAGYGQDAIGHRLALAITLVGWLATCLIAASVTTKAGFWVAGVIAG
                     LCMGASQSVGRAMVGLLAPSHRLGEFYGLWTLATRLASIIGPLAYGLLTWASLGNQRI
                     AMAATGLFFLVGLVLLLPINMSRGQSGPLQKN"
     gene            complement(2258..3118)
                     /locus_tag="VIC30_12835"
     CDS             complement(2258..3118)
                     /locus_tag="VIC30_12835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018437238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase"
                     /protein_id="HEY7805301.1"
                     /translation="MNRKALATKVRNQELIVAPGIYDLISAKMADRMGFDALYVTGYG
                     LVASYLGLPDAGLATYTDMLHRISRMCEMTETPIMADADTGYGGLLNVAHTVKGYEKA
                     GVAAIQIEDQQFPKKCGHTPNRPVIAKSDMVQKIKVACDARTDEDFLIIARTDARAGL
                     GLDEAIERAAAYAEAGADVLFVEAPESIDEMQKVCESLNKPLLANMVTGGKTPVLPGE
                     ELKAMGYTIAIHPVAGFLSCAAGLDKAFNDLKTHGTVTERTPMYDFSEFTEMIGFPDV
                     WAFEKRYAQD"
     gene            3515..3895
                     /locus_tag="VIC30_12840"
     CDS             3515..3895
                     /locus_tag="VIC30_12840"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011463512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEY7805302.1"
                     /translation="MTTAKPCIFCSLPEASWVNHNELAFAVRDTAPVNPGHMLIIPKR
                     HVSSYFDLTNEEVLALMDLTRRAKQTLDVDFSPDDYNLGINDGPLGGQTVPHVHIHVI
                     PRYRGDVDDVRGGVRNIIPERALY"
     gene            3925..4479
                     /locus_tag="VIC30_12845"
     CDS             3925..4479
                     /locus_tag="VIC30_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007883148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine nucleosidase"
                     /protein_id="HEY7805303.1"
                     /translation="MTNPLIVTALPQEFAHEPIPHDIPVVFTGLGKLNAALSLFEAIE
                     RHRPSVVINFGTAGRIDRTATGLVEVADVLQHDMMAEPLALRGQTPFDDTPHILKSGF
                     DGVRCATGDSFVTSVDPWLVTQNVHVVDMELFALALVCHRRGIDWRSFKYITDDTDDS
                     AAADWQDKVHHGRDLFLAKLDDLL"
     gene            4483..5505
                     /locus_tag="VIC30_12850"
     CDS             4483..5505
                     /locus_tag="VIC30_12850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012213711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEY7805304.1"
                     /translation="MKTFYHPTQKRHHPRTYFSRGQMRTPQEVPERVDGILQGLQELH
                     LPVQEPADHGMTPINAVHDAGYLAFLESAHRRWKELPEDWGDEVMSNVFVRERNPLQG
                     ILGEAARYLADGSCPVGKHTWTSSYWAAQSAIAATQSVLAGEPNAYALCRPPGHHARA
                     DGAGGFCYVNHAAVSAQLLRSQFGKVAVLDTDMHHGQGIQEIFYDRDDVLYVSVHGDP
                     TNFYPAVAGFADETGEGAGLGFNLNLPMPHGSSEAVFFEMVQKALQAVATFKPDALVF
                     CLGFDVYEHDPQAKVSVTTDGFHRLGQAIAGLKLPTVIIQEGGYDLTHLSANTQRFFQ
                     GFLDLK"
     gene            complement(5491..6309)
                     /locus_tag="VIC30_12855"
     CDS             complement(5491..6309)
                     /locus_tag="VIC30_12855"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7805305.1"
                     /translation="MKKYILSVSDKLKLNVLETGNPTGPCVLFIHGFSQSAWAWENQL
                     RGDLSKTHRLLALDIRGHGESDKPLEAQNYTEAERWADDIAAVIEHSGAQQVMLVGWS
                     YGGFIICDYLRQYGQSKVSGLVFVGAATKMGTEEAMTMLGGKLTKHVPAFFGNETGQT
                     VDAMTQFVRDCFATPPDIETFYKVLGYNLVVPPAVRAGLFSRKLDNDDVLSAITVPTA
                     VVHGVADEIVLPNSGEHIGSLVPHAHMHRFDAVGHCPFSEAPEAFDSVIRSLQV"
     gene            complement(6370..6873)
                     /locus_tag="VIC30_12860"
     CDS             complement(6370..6873)
                     /locus_tag="VIC30_12860"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEY7805306.1"
                     /translation="MSTQLTTQQRIELQRDCIKEHMRAENAHEWPAVYETFIKDERAY
                     YDVVPLSARFAGFDGVKDFYEIFDNAVPDFHITVTGEYDSPGCSVREVTITGTHRGEF
                     CGLPGSGNKVSFELAAFYIFGDGDEAGKLVAERIYFDTETILKQMRGEAEAPVGVGLT
                     SDTQAMA"
     gene            7060..7515
                     /locus_tag="VIC30_12865"
     CDS             7060..7515
                     /locus_tag="VIC30_12865"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEY7805307.1"
                     /translation="MDLVTLDSLIVDLHLAYKNVVSEADELLSRHGLARSHHKVLFFV
                     ARNSMCRSSDVQTFLGITRQAIQRPLTDLHRRLLIESVVAPQNRRIHLLRITPEGHAL
                     EQQASSLIQRHFETAFEKLNADQLQLWRQTMKQLSLPLVAQELKDAIDS"
     gene            complement(7612..8511)
                     /locus_tag="VIC30_12870"
     CDS             complement(7612..8511)
                     /locus_tag="VIC30_12870"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013519067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7805308.1"
                     /translation="MTQSPPIATTNIAIIGVGYMGHGIARNILKAGFVLKFLDHPGNQ
                     PTDDVIALGGLAETDAKALGQWADVVLLCVTGTPEVEDVLYQQGLLETLGAGKTLIDC
                     STAIPTSTQRIAQDVQTRGARFIDAPMTRTPKEAEEGRLNLIVGADPVVFEAVLPLLQ
                     SFAENIAHAGDVSAGHQMKLIHNFVSLGFAAVLSEATAAAQIAGIKPEVLLDILGKGG
                     GDGVVFNRLKHYISDSDASGFTFSMANAAKDMGYYEAMAADLHVHGAIAASVSDTYRQ
                     AVEQKPDAKVPELIDILRRQARK"
     gene            complement(8597..9559)
                     /locus_tag="VIC30_12875"
     CDS             complement(8597..9559)
                     /locus_tag="VIC30_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY7805309.1"
                     /translation="MFTRLLPKFKFNSLLTIALFGLGLSSAQAADYIPEAEQVTDNVY
                     AIVGPLGQRSQANAGLNANYGFVVAESGVILIDAGASAHAAQLLEKAVAKVTDKPIRW
                     VLNTGSQDHRWLGNGYFAQQGAAVYAMQGTPETQQRFADQQLASIQRFVGDQLDGTTP
                     TVADQIQPAPETGLEIDGVSLRWIQTNAHYPADTMIYLPEPSVMFTGDLVYVDRALSV
                     LPESDVRAAAAAFETLVEIDPDFIVPGHGRVTDLAQAQRETGDYYSFLIQNVGEAGRN
                     MESLQDTLDQFDKPQAFMHLQNFDELHRSNMNRVFVDFEANPDD"
     gene            complement(9668..>10139)
                     /locus_tag="VIC30_12880"
     CDS             complement(9668..>10139)
                     /locus_tag="VIC30_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017523478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7805310.1"
                     /translation="GIGLVPEGRQVFPNLTVWENLVATARHYTNARAWTLDRVFALFP
                     KLAERRKNFGNQLSGGEQQMLAIGRALMTNPKLLILDEATEGLSPLLRQEIWQALATL
                     KDEGLSILITDKNVKQLLGLCDHHVILQKGQVVWTGTSEAFVHDPDVREKYLAA"
BASE COUNT         2511 a         2829 c         2486 g         2313 t
ORIGIN      
        1 taagcggcga actgatcaaa agcgatctgt gcctcggctg cggtcatcac cgatggccca
       61 ccgcccatgt aaatggccac ttgcagcatt tcattgaact cttcttgcgt gacacccatc
      121 ttgtggcagg cctgagcatg aaacgccagg cacccctgac aacgcatggc aatcgcaatg
      181 gccatggcca tgagttcctt gttcttagca gtcaaggccc catcggcgtg cgtggcgcca
      241 gccatttgag agaacccttt catcgtgtcc ggtatgtccg tgcgaaatgt tttgagtttg
      301 gcgctaatct gcgaggcaag ggcttggtag tcggacataa cactgggctc cagtaattgg
      361 taattgaaag aaaccaattt atagccccag cctatgacag ctgacctgac gaagatcaat
      421 ttttttgcag tggaccagat tgaccgcgcg acatgttgat tgggagcaac agcacaagcc
      481 ccaccagaaa aaacagtcca gtggctgcca tggcaatacg ctggttaccc agactcgccc
      541 aagtgagcaa cccataggcc aacggtccaa tgatgctggc caaacgagtg gcaagtgtcc
      601 ataacccgta gaactcgcct aaccgatgtg agggtgccaa taaaccaacc atggcacgcc
      661 ccacggattg actcgccccc atacacagcc cggcaatcac gcctgcaacc cagaatccag
      721 ccttggtcgt gaccgaggct gcgatcaaac acgtggccaa ccagcctacc aaggtgatgg
      781 ccagcgccaa gcgatgccca atggcgtctt gcccgtaacc ggccatgagc gcaccaatga
      841 ccgctgcgat attgagcaca aaaatcagga tcatgatctc ggtctcagtg aacccgatga
      901 cctgctgcgc ataaatcgcc gccaatgcaa ttgccaccgc tacacccgcc atataggcca
      961 ctgtgcaagc aagcaaccaa acaaagtccc ggtagtcgcg tgcatgctgc caagtttcac
     1021 gcaaccgttg ccaggcgggc gatacgtcac cggcacttcc cggccggtct ttcaatagcg
     1081 aaatcgaaat tagcgcagcc gccgcaaaaa cagtggctgt catgatcatg gtgaccggca
     1141 caaacgcttg tgcgctttga ccagcggatt gggcatgcaa cacatatgcc agacaaatac
     1201 ccagtgtgaa catgccaccg atgtagccta gcccccagcc ccagccgcta acgcgaccca
     1261 tggcatgcgg tcgggcaagt gtgggcaagt aactagagat cagtgactct ccccaactga
     1321 agaacatgtt ggagaacaac accaagacca tcgctagcac caccgagcca ggcccagccc
     1381 aggccagcgc agcggtacac accacacatc cgatcgtggt catggccagc aggccacgac
     1441 gccgttcgat tcggtcacta cgagcgccaa tcagtggaat ggtcaacatc acaacaaggt
     1501 gtgacagact tagcgtgaca gtccataaca acgtgccaag ggtagcctcg ccgaccacca
     1561 ccgatacaaa gtaggccgag aacacggctg tgagtactac ggtggtgtag cctgagttgg
     1621 caaagtcgta cagcgcccag ccaaatactt ccagacggct aacaccgggg tttaacaggg
     1681 tcggtttcat ggcggataga gtaacgcgtt tgaccgatgc ctaacgaaca tgctccggac
     1741 atgccatgaa ggcattgcca agctcgaaga ctagtcagtg catgaggact tcaataacgc
     1801 cagacttgac tgaaacgcac ccaagctgat cagaggttca caccaaaaat acgcgaacgc
     1861 tctctgccac atcgtgtgca aaggaatcgc ttagcaaagg gaattaactt aagcaaaccc
     1921 gagcgctttg tgcgaaccat ggggtctgcc ggatccttgc aacgcttgca aatcagtctc
     1981 agcctagtcg attggctcga ctgagagtcg cggctcgatc gcacggaggc tgtgccagac
     2041 gtcttacttg gattcatggg ataggggatt catttggtta caggtttata accgaactct
     2101 accctcaatt ccaccacagt acactcgcaa atatataggg ggctaacaga aatcgatggc
     2161 gagaatccct gataatttgt actgatggtt cgcgccacga cctgcgcggt tagttcaatg
     2221 tcactggtta ccggtaacca taaaaaaccg ttatccatca gtcctgcgca tagcgcttct
     2281 caaatgccca cacatccgga aacccaatca tctcagtaaa ttcagaaaag tcatacatgg
     2341 gtgtgcgctc agtcactgtg ccatgcgtct ttagatcatt gaaggcttta tccaagcccg
     2401 ccgcgcaaga caggaatcca gccaccgggt gaatcgcaat ggtgtagccc atggctttca
     2461 gttcctcacc gggtagcacc ggggtcttac cacccgtcac catgttggcc agcaggggtt
     2521 tattcaagga ctcgcagact ttttgcattt cgtcgataga ctcaggcgct tcgacaaaca
     2581 acacatccgc accagcttca gcgtaggcgg cagcccgctc aatggcctca tcaagaccaa
     2641 gaccggcacg cgcgtctgtg cgcgcaataa tcaaaaagtc ctcatcggtg cgtgcatcac
     2701 aagccacctt gattttttgc accatatcgg atttggcaat cactgggcgg ttcggcgtgt
     2761 gcccgcattt ctttgggaat tgctgatcct caatctgaat cgcagccacc ccggctttct
     2821 catagccctt gacagtgtgt gccacattca acaatccgcc atagcctgta tccgcatctg
     2881 ccatgatcgg tgtttcagtc atttcgcaca tgcgtgaaat gcggtgcaac atatcggtat
     2941 aggttgccaa acccgcatct ggcaacccaa ggtatgaagc caccaacccg taccccgtga
     3001 cataaagcgc atcaaaaccc atgcgatcag ccatcttggc agaaatcaag tcgtagatac
     3061 cgggtgcaac gattaattcc tggttgcgca ctttggtagc gagggctttg cggttcatgc
     3121 agttgtctcc taggttttat ttaacgctgc agcgcagcac cgaatttatt tagtgtaacg
     3181 agtggatgac cttgagtggg catcatgagt gggcatcaat caccattgaa gtagcagcac
     3241 tttcattcga tcagcatgcc gtgaaaggct gcagcccgct cggtgtcgct caagggtgga
     3301 atccactgtg tgtcatcacg caaggtttca aacgagtcac cagacatgat tctgctttcg
     3361 ctagcgtgaa acttcagtat tttttgagtc tgctaagtag atcgcatcaa tacaaccaaa
     3421 tgcaagacag gcagacaaga tgcactcctg ccttttaccg gctcgttccg gtagacttag
     3481 gcaacaatga atactgcact taggaatccg tgccatgacg acagccaaac cttgcatttt
     3541 ctgttctctg cccgaagcga gctgggttaa tcacaacgaa ctggcatttg ctgttcgtga
     3601 caccgcaccg gtcaatcccg ggcatatgct gatcatccca aagcgtcatg tctcctccta
     3661 ctttgacctg accaatgaag aagtgctcgc gctgatggac ctgacacgac gtgccaaaca
     3721 aacactcgat gttgatttct caccagatga ctacaaccta ggcatcaacg atggaccgct
     3781 cgggggtcaa accgtgccgc acgttcacat tcatgtcata ccacgctatc gaggtgacgt
     3841 tgatgatgtc agaggcggtg tacgcaacat catcccagaa cgcgcgcttt actagtacca
     3901 ccacattgct tcacagagat tcctatgaca aacccgctga tcgtgaccgc actgccgcag
     3961 gaatttgccc acgagccaat tccgcatgac atccccgtgg tctttactgg tcttggtaag
     4021 ttaaatgccg cgttgtcttt gtttgaggcc attgaacgcc accggccatc tgtcgtgatc
     4081 aactttggta cagccggtcg gatcgatcgc actgcaaccg ggctcgtcga ggttgccgat
     4141 gtcttgcaac acgacatgat ggccgagccg ctggcactgc gcgggcaaac gccctttgat
     4201 gacacgccac atattttgaa gtcggggttt gacggtgtgc gctgcgccac aggcgacagc
     4261 tttgtcacaa gcgttgatcc gtggctagtg acgcagaacg ttcatgtggt ggatatggag
     4321 ctctttgccc tggcactggt gtgtcaccgc cgcggtatcg actggcgctc atttaagtac
     4381 attaccgatg acaccgacga cagtgccgct gccgactggc aagacaaggt tcatcatggg
     4441 cgtgatctgt ttttggccaa actcgacgat ctcctctagc ccatgaaaac tttctaccat
     4501 cccacacaaa aacgccatca cccacgcacc tacttctcac gcgggcaaat gcgcacacct
     4561 caggaagtgc ctgaacgggt tgacggtatc ttgcaaggac ttcaagaact gcatctacct
     4621 gtgcaagaac ccgccgacca tggcatgaca cccatcaacg ccgtgcatga cgcgggctat
     4681 ctcgctttct tggaatcagc acaccgccgc tggaaggaac tgcctgagga ctggggtgat
     4741 gaagtcatgt caaacgtgtt tgtgcgtgaa cgcaacccgt tgcaggggat tctgggcgag
     4801 gcagcacgct atttggccga tggcagttgc ccggttggca aacacacctg gacatcgtct
     4861 tactgggcag cccaatcggc gattgccgcc acgcagtcag tgctagcggg cgagcccaac
     4921 gcgtacgccc tttgccgccc acctggccac cacgcccgcg ctgatggcgc cggcgggttt
     4981 tgttatgtca atcacgcagc agtgagtgct caactgctac gcagtcaatt cggcaaggtg
     5041 gcggtactcg atactgacat gcatcacggt caaggcatcc aagaaatctt ctatgaccgc
     5101 gatgacgtgc tctatgtctc ggtccatggt gatcccacca acttctatcc ggcagttgca
     5161 ggctttgccg atgaaactgg cgaaggtgca gggctgggtt tcaacctgaa cctgccgatg
     5221 cctcatggat caagtgaggc ggtatttttt gagatggtgc agaaggcttt gcaggcggtg
     5281 gcgactttta agcccgatgc gctggtgttt tgcttggggt tcgatgttta tgaacatgac
     5341 ccacaagcaa aagtgtcagt gaccaccgat ggatttcacc ggctggggca agccattgcc
     5401 ggactcaaac tacccacggt gatcattcag gaaggcgggt atgacctgac ccacctatcg
     5461 gctaacactc agcgtttttt tcaaggcttc ttagacctga agtgagcgga tcactgaatc
     5521 aaatgcttcg ggtgcctcac taaacggaca gtgacccaca gcgtcaaacc gatgcatgtg
     5581 ggcatgtggc accaacgagc caatgtgttc gcccgaattt ggcagcacga tctcatcagc
     5641 tacgccatgc acaaccgccg ttggcacggt aatggcggac aacacatcat cattgtcgag
     5701 cttgcggcta aacagtcccg cacgcacagc cggtggcacc acgaggttgt agcctaagac
     5761 cttgtagaag gtttcaatgt caggtggtgt ggcaaagcag tcccgaacaa actgcgtcat
     5821 ggcatcaacc gtctgaccag tttcattgcc aaaaaacgcc ggtacatgct tggtcaattt
     5881 ccccccgagc atggtcattg cctcttctgt ccccatcttg gtggctgcac ccacaaacac
     5941 caggcctgag actttcgact gcccgtactg acgcaggtag tcacagatga tgaagccccc
     6001 gtatgaccag cccaccaaca tcacttgctg cgcgccactg tgttcaatga ccgccgcgat
     6061 gtcatcagcc caacgctcag cttcggtgta gttctgagcc tcaagcggtt tatcggactc
     6121 accatgcccg cggatgtcga gtgccaagag gcggtgcgtt ttactgagat caccgcgcaa
     6181 ctggttttcc cacgcccagg cgctttgaga gaaaccgtgt atgaacaaaa cgcaggggcc
     6241 tgttgggttg ccggtctcta gcacgttgag ttttaattta tcgctgacac taagtatgta
     6301 ttttttcatt aacttaagac tccaatcttt cagacatgag ctcctgaaga actcatgtct
     6361 agttcacact caagccattg cttgagtatc actggttagg cctacaccaa caggagcttc
     6421 agcctcgcca cgcatttgtt tgaggatagt ttctgtatca aaataaattc gctctgcaac
     6481 caacttacca gcctcatctc catcaccaaa aatatagaat gctgccaact caaaactaac
     6541 tttattgcca ctacccggta agccacaaaa ctcacctcga tgcgtccctg ttatggtgac
     6601 ttcccgaact gagcagcccg gtgaatcgta ttcacccgtg accgtaatat gaaaatcggg
     6661 aacggcatta tcaaagatct catagaaatc cttcacccca tcgaagccag caaatcttgc
     6721 tgacaatgga acaacatcat agtaggcgcg ttcgtcctta atgaatgttt cataaacagc
     6781 aggccactca tgtgcatttt ctgcacgcat gtgctcctta atgcaatccc gctgcagttc
     6841 aattctctgt tgcgttgtta gttgcgtact cataagtgcc tccttttcaa gcttgtcttg
     6901 ttttttcaga ccagtccttc ttacaactgg tcaagtcatt ttatatatta ataagtctat
     6961 gtcaatacta tttacttaga cttatggtta actctgatat gctagaaagg taacatactg
     7021 ctgtactaca atttcgttga aggcaaaaac tgagaaaaca tggacctcgt aacacttgac
     7081 tccttgatag ttgaccttca tttagcctac aagaacgtcg tgtccgaggc cgatgaatta
     7141 ctgtctcgac acggattggc acgcagtcat cacaaagtat tgttttttgt cgcacgtaat
     7201 tcaatgtgca ggtcttccga tgtgcaaacg tttctgggga tcacacgaca ggccattcaa
     7261 aggcccttga ccgatttaca tagaaggtta ttaatagagt ctgtagtcgc accacagaat
     7321 cgacgcattc atttgttgcg catcactcca gaagggcacg cgctcgaaca acaagctagc
     7381 tctttaatac aacgccactt cgaaactgca ttcgaaaagt tgaatgctga tcaacttcag
     7441 ttatggcgac aaaccatgaa gcagctttca ctaccgctcg ttgctcagga gctaaaagac
     7501 gccatagaca gctagattgg agagcatctt tgagactctt ggctcgtaaa gtggcgatag
     7561 cagcaaaaaa actcaacgac ctatttggcg attaaggcgg ttacgtaggc actactttct
     7621 agcctggcga cgcaatatat cgattagctc aggcactttg gcatctggct tttgctcaac
     7681 ggcttgccga taggtgtcac tcacagatgc ggcgatcgcg ccatggacat gtaaatcagc
     7741 ggccatggct tcgtaatagc ccatgtcttt ggcggcattg gccatggaaa aagtgaaacc
     7801 gctggcgtca ctgtctgaga tgtaatgctt taagcggtta aacaccacac catcgccgcc
     7861 acctttgcct aggatgtcaa gtaacacctc aggcttgata cctgcaatct gtgccgcagc
     7921 agtggcttca gacagcaccg ccgcaaaacc caacgacaca aagttgtgaa tcaatttcat
     7981 ttgatgaccg gcgctcacat ccccggcgtg ggcgatgttc tctgcaaagc tttgcagcaa
     8041 tggcaaaacc gcttcgaaca caacggggtc agccccaacg atcaggttca aacgtccctc
     8101 ttcggcttct ttgggcgtgc gcgtcatggg cgcatcgata aaacgagcgc ctcgcgtctg
     8161 cacatcttgc gcaatgcgct gcgtcgatgt cggtatagcg gttgaacagt caatcagtgt
     8221 cttgcccgcc cccagggttt caagtaggcc ctgttggtac aacacgtctt caacttccgg
     8281 cgtgccagtg acacacagca acaccacatc ggcccactgg cccagtgctt tcgcatcagt
     8341 ctcggctagc ccacccaagg caatcacgtc atcggtgggt tgattgccgg gatgatctag
     8401 gaatttcagt acaaagccgg ccttaagaat attgcgggca atgccatggc ccatgtagcc
     8461 cacgccaatg atggcaatgt tggttgtggc aatcggtggt gattgagtca tgttcgggct
     8521 ttccaaagat aggtggcttg cgtgggatgc ctgaaatgca accaaacgat atggtcatct
     8581 tacaaggcag ttcaatctaa tcgtctgggt tcgcttcaaa gtcgacaaac acgcggttca
     8641 tgttgctgcg gtgcaattcg tcgaagtttt gtagatgcat gaaggcttgt ggcttgtcga
     8701 attgatcgag cgtgtcttgc aatgactcca tattgcgccc cgcttcgccg acattctgaa
     8761 tcaagaagct gtagtaatca ccggtttcac gctgcgcttg cgccaaatcg gtcacccgac
     8821 cgtggccagg cacaataaag tcaggatcaa tctcaaccag cgtctcaaac gccgcagccg
     8881 ccgcccgcac atccgactca ggtaagacac tgagcgcccg atcaacgtat accaaatcac
     8941 cggtgaacat caccgatggc tctggcagat agatcatggt gtcagccgga tagtgtgcgt
     9001 tggtttgtat ccagcgcagg ctcacaccat caatctcgag tccggtttca ggtgctggtt
     9061 gaatttgatc ggccacggtc ggcgtggtgc catctagctg atcgcccaca aagcgttgga
     9121 ttgacgccaa ctgctggtca gcaaaccgct gttgtgtctc gggcgtaccc tgcatggcgt
     9181 aaacggcagc accttgctga gcaaagtagc cgttacctaa ccagcggtga tcttgcgagc
     9241 ctgtgttcaa cacccaacgg atgggtttgt cggtgacctt ggcgacggct ttttctagca
     9301 actgcgctgc atgcgcactc gcacccgcgt caatcaaaat cacgccggac tcagccacca
     9361 caaacccgta gttggcattc agccctgcgt tggcctgact gcgttgtccc aatggaccaa
     9421 caatggcgta gacgttatct gtcacctgtt ctgcttcagg gatgtaatca gcggcttgtg
     9481 ctgaggacag tcctaagcca aacaaggcaa tggtcaagag actgttgaat ttaaatttcg
     9541 gtaacaagcg agtaaacatg gtctacctca aacatgattt agtcacatat tagatgaagc
     9601 taacacaagc gacgtaatga cggaaacgaa cgcatcacgg tcacccctca cgacacagac
     9661 tacgttatca agccgcgaga tacttttctc ggacatccgg gtcatggaca aacgcctcag
     9721 atgtacccgt ccaaaccacc tgaccctttt gcaggatcac gtggtggtcg cacaagccaa
     9781 gtaactgctt gacgttttta tcggtaataa ggatcgacag accctcatct ttgagcgtag
     9841 ctagggcctg ccagatctct tgcctaagta atggcgataa cccctcagtg gcctcatcga
     9901 gaatcaacag cttcgggttg gtcatgagcg cgcgaccaat ggccagcatc tgttgttcgc
     9961 cacccgagag ttgattccca aaattcttgc ggcgctcagc gagcttggga aacaaagcaa
    10021 acacccgatc caacgtccag gcacgagcgt tggtgtaatg ccgtgcggtg gcaaccagat
    10081 tctcccagac cgtcagattg ggaaatacct gacgaccttc tggcaccagg ccaatacca
//
LOCUS       DATBNL010000759         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29081, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000759 DATBNL010000000
VERSION     DATBNL010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29081"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1365)
                     /gene="mutL"
                     /locus_tag="VIC30_12885"
     CDS             complement(<1..1365)
                     /gene="mutL"
                     /locus_tag="VIC30_12885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEY7805311.1"
                     /translation="MSATRRTIAALPDRLISQIAAGEVIERPASVLKELVENAIDANA
                     NVIEVRLEAGGIRRISVNDDGHGIEHDEMNLALTRHATSKIRSLQDLESVASMGFRGE
                     ALASVASVARLTLISRTAQDEHAWQLDGHAQTPQPAAGSQGTTVDVRGLFDDVPARRK
                     FLKAEATEFGHCMDVMTRIALAHPEIAFRVFHNDKAARQWPVASLSKRVADVLSTEFA
                     DAAIAVDASGGPAQIRGFVSRPTAARARADRQFLFVNGRHVRDRTVSHALRAAYADVL
                     HGDRQPAYMLFIDIDPQTVDVNVHPAKHEVRFRDSGAVHRLVQQVVTQALSSSVDAAQ
                     NTADPAMPTGTQSHSASPAPNTWRTSPSATYPKRPALQSRLSLNEPRPSVGPSSNPGW
                     GAGWQSAHAPTATGTATAAGIPTNQTGAGQATQGDRRENNTEDTTEANNETVWPLGRA
                     LAQLH"
BASE COUNT          287 a          397 c          476 g          347 t
ORIGIN      
        1 gtgcaactgc gccagtgccc gacccaatgg ccagaccgtc tcgttgttgg cttcagtggt
       61 gtcttcagtg ttgttttcac gcctatcccc ttgtgtagct tgacccgcgc ccgtctgatt
      121 tgttggtatg cctgcagcgg ttgctgtacc agttgctgta ggcgcatggg cggattgcca
      181 tccggctccc cagccggggt tgcttgatgg gccaacgctt gggcgcggtt cattgagcga
      241 taaacgggac tgcaaggccg ggcgcttggg gtaggtcgcg cttgggcttg tgcgccaggt
      301 gttgggtgct gggctcgcgc tgtgcgactg ggttcctgtc ggcatggcag ggtcggccgt
      361 attctgagcg gcatccacgc ttgacgacag ggcttgggtg accacctgtt gtactaggcg
      421 atgcacagca ccgctgtctc tgaaccggac ctcatgtttg gcgggatgaa cgttgacgtc
      481 gaccgtctga ggatcgatat caatgaagag catataggcg ggttgtcggt cgccatgcaa
      541 cacatcggcg taggctgcgc gcaaggcgtg tgagacagtc cggtcacgca cgtgtcgacc
      601 gttgacaaac aaaaactggc gatcggctct ggcgcgcgct gctgttggtc gactgacaaa
      661 gccacgaatc tgggctggcc cacccgaggc atccacggca atggcagcgt cggcaaactc
      721 ggtgctcaac acgtcagcca ctcgcttgga caacgacgcc actggccact ggcgagcggc
      781 cttgtcgttg tgaaacaccc gaaatgcgat ctccggatgc gccagggcaa ttcgagtcat
      841 gacatccatg caatggccaa actcggtggc ttcggcttta aggaacttgc gtctagcagg
      901 cacatcgtca aataggccac ggacatcaac ggtggtgcct tggctgccag cggcaggttg
      961 gggtgtttgt gcgtgcccat cgagctgcca tgcgtgctca tcttgagcgg tacgtgagat
     1021 gagcgtcagt ctggctacgg acgccacgga agcgagcgct tcgccacgaa accccattga
     1081 ggcgaccgat tcgaggtctt gtaatgaacg gattttgctg gtggcgtgac gcgtaagcgc
     1141 tagattcatt tcgtcgtgtt caatgccgtg tccgtcgtcg ttgactgaaa tgcggcgtat
     1201 gccgccagcc tcaagccgca cttcaataac attggcgtta gcatcgatgg cgttctcaac
     1261 gagttctttg agcaccgagg ccggacgctc gatgacttcc ccggctgcga tctggctaat
     1321 caagcggtcg ggtagtgcag cgatggttcg acgggttgcg gacataaaaa ataggcctct
     1381 gtgaaacaga gacctattgt agaaccacct aggttgtgcg cagtctgttg tctgctttag
     1441 gtggtttggc taagggagtt agataagtta gccgaaggat ttaactaact tgtgccaaat
     1501 gagggtt
//
LOCUS       DATBNL010000760         2357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_18813, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000760 DATBNL010000000
VERSION     DATBNL010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18813"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VIC30_12890"
     CDS             complement(<1..575)
                     /locus_tag="VIC30_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7805312.1"
                     /translation="MIEFQHVSKSYGPNAHILEDVSFQVTAGEFLFIAGPSGAGKSTL
                     LKLIAGLEPATRGHIHVNGQRLDQITARARPYLRRAVGVILQDTHLLYDRSALDNVML
                     PLAVAGHPSGLAQSRARAALQKVGLAGKEQANPISLSGGEQQRLAITRAIVNRPALLI
                     ADEPTANLDRETAHKVMSVFKDFNQVGVTTL"
     gene            750..1766
                     /locus_tag="VIC30_12895"
     CDS             750..1766
                     /locus_tag="VIC30_12895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003817638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY7805313.1"
                     /translation="MKTLKMAAVGAAMFATATVANAGQTFDAVKEKGFVQCGVSTGLA
                     GFSNPDSQGKWTGLDVDMCRAVAAAMFGDASAFKVTPLTPVQRFTALQSGEIDVLTRN
                     TTQTLTRDTTLGLTGAGVNFYDGQGIMVKKDLGVTSAKGLNGAAICVQPGTTTELNLA
                     DYFRSQNMEFQPVVVEKLDETVRAFTSGRCDAFTTDKSQLASVRTTLPNPESYVILPE
                     TLSKEPLGPMVRQGDQEWFNLVRWSLFAMIEAEEYGITSKNVTDMLTSNDPNVQRILG
                     VTPGMGKNLGVSDQWAFHIVEQVGNYGESFERNVGKDSPLGLDRGINATWRNGGLMYG
                     WPIR"
     gene            1861..>2357
                     /locus_tag="VIC30_12900"
     CDS             1861..>2357
                     /locus_tag="VIC30_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003815068.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY7805314.1"
                     /translation="MSQSTARSPVKPASKPKSAWNDPKVRGIFYQVLVVGLVALGVWY
                     LVSNTLHNLSVRNIATGFGFLAREAGFAIGEGPISYTPEDTYSRALTVGLLNTLRAAA
                     IGIVLATILGTIIGIARLSSNWLVAKLASIYVEVMRNVPLLLQLFFWYAIISESFPGP
                     LSLKE"
BASE COUNT          517 a          609 c          667 g          564 t
ORIGIN      
        1 tccaaagtcg ttacgccaac ctggttgaaa tctttgaata ccgacatgac tttgtgtgct
       61 gtttcacgat cgagattggc agtcggttca tcggcgatca gcaatgccgg tcggttaacg
      121 atggcccgag taatggccag tcgttgctgc tcgccacccg agagagaaat cggattggct
      181 tgctctttac cggcaagccc aaccttctgc aaggccgcac gggccctaga ttgcgccaat
      241 ccgctgggat ggccggccac ggccagtggc agcatgacat tgtctagggc gcttcggtcg
      301 taaagcaggt gtgtatcttg taatatcacg cccaccgcgc gcctgagata gggcctggcg
      361 cgcgcggtga tttggtccaa gcgctggccg ttgacatgga tgtgaccacg agtggcaggc
      421 tctagacccg cgatcagttt gagaagtgtc gacttgccag cgcctgaggg accagcaata
      481 aagagaaatt cgccggcggt gacttgaaat gacacatctt cgaggatgtg cgcattaggg
      541 ccgtaggatt tggagacgtg ttgaaactcg atcatgatgt gactatttaa caggtagtta
      601 agtgtaaacc gtcaagctgg cgcgaaattt gctttagcgg gttatccccc attcggttct
      661 tggtggggta aggctacgat ccatgtctca ggatatgatc ctaagatcta gttactgacg
      721 agactaacca aacgttactg gagagttaca tgaagacatt aaaaatggcc gccgtcgggg
      781 ctgcgatgtt tgccaccgcc accgttgcga atgctggtca gacatttgat gccgtgaaag
      841 aaaagggctt tgtgcagtgt ggtgtttcaa ccggcttggc tggtttctct aaccctgaca
      901 gccaaggtaa gtggacaggc ttggatgtcg acatgtgccg tgccgtggct gctgccatgt
      961 ttggtgatgc atcggccttc aaagtcacgc cattgacgcc agtgcagcgc ttcaccgctt
     1021 tgcagtccgg tgaaatcgat gttctcacgc gtaacaccac gcagacactg acacgcgaca
     1081 cgaccttggg tctgaccggt gcgggtgtga acttctatga cggtcaaggc atcatggtca
     1141 aaaaagacct tggcgtgaca agcgcaaaag ggctcaacgg cgctgcgatt tgcgtacaac
     1201 ccggcacgac cactgagctg aacctagctg actatttccg cagccagaac atggagttcc
     1261 aaccggtagt ggttgagaag ctcgatgaga cggtgcgtgc atttacttcg ggccgttgcg
     1321 atgcgtttac gactgacaag tcacagttgg cttccgttcg caccacgttg ccaaaccctg
     1381 agagctatgt gattctgcct gaaaccctgt ctaaagagcc gctcggaccc atggttcgcc
     1441 agggtgacca agagtggttt aacctcgtcc gttggtcgct atttgccatg atcgaggccg
     1501 aggagtacgg catcacgtcc aagaatgtca ccgatatgct caccagcaat gaccccaacg
     1561 tacagcgtat tttgggtgtg acacctggca tgggtaagaa ccttggtgtt agcgatcagt
     1621 gggcttttca cattgttgag caggtcggca actatggtga gagctttgag cgcaacgtgg
     1681 gtaaagacag ccccttgggc ctggaccgtg gtattaacgc cacctggcgc aacggcggcc
     1741 tgatgtacgg ctggccaatc cgttaatcat ttgtagcaac tttgccggtg cttgggacct
     1801 agccaagccc ggccagacac aggtgccttt ggcgcctgtg tcctgtagct ttgacatcct
     1861 atgagccaat ctaccgctcg ttcgccggtc aagccggcaa gcaaacctaa aagtgcctgg
     1921 aatgatccca aggtgcgcgg catcttctac caagttttgg tggttggctt ggtcgcactc
     1981 ggtgtctggt acttggtatc gaacacacta cataatctgt cggtgcgcaa catcgccacc
     2041 ggttttggtt tcctggcgcg tgaagctgga ttcgctattg gcgaaggacc gatcagttac
     2101 acgcctgaag acacttactc ccgagctttg acagtaggcc tcttaaacac cttgcgtgca
     2161 gcggccattg gtattgtgct ggccaccata ctgggcacga tcatcggcat tgcgcgacta
     2221 tcaagtaact ggctggtggc caagctcgct agcatctatg tcgaagtcat gcgcaacgtg
     2281 ccgctgctgc tgcaattgtt cttctggtac gccattattt ccgagagttt cccgggacca
     2341 ctatctttga aagagaa
//
LOCUS       DATBNL010000761         4880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_98731, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000761 DATBNL010000000
VERSION     DATBNL010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98731"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VIC30_12905"
     CDS             <1..396
                     /locus_tag="VIC30_12905"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate:AMP phosphotransferase"
                     /protein_id="HEY7805315.1"
                     /translation="YGRVLVERVEKLIPPSVWKRAYSEINGFEQQLSRDGVIVVKFWL
                     AITEDEQLNRFNQRQTHPYKQYKLTDEDWRNRNRWRAYETASADMLVHTDTAYAGWHL
                     IAANDKRHARVEVIKQLVKRIEEAIKHDD"
     gene            389..841
                     /locus_tag="VIC30_12910"
     CDS             389..841
                     /locus_tag="VIC30_12910"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017522461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEY7805316.1"
                     /translation="MTDKAIAATATQCPLCQLPLPGELVRGDQWVIIDANEPMFPGFT
                     RVVWIEHVREMTDLSTRQRQDLMDVVFEVEQIMRTSLNPHKVNLASLGNQAPHVHWHV
                     IPRWSDDVAYPGPVWVSGQDTDAAQQRRAQTQRALADYHGALIQRFTA"
     gene            847..1791
                     /locus_tag="VIC30_12915"
     CDS             847..1791
                     /locus_tag="VIC30_12915"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEY7805317.1"
                     /translation="MTQLNPDTAPANATTTWRSMLFVPANSQKFLTSALKRDADAIQL
                     DLEDACPPDLKAATRQQIGELAEQCARAGFDVIVRVNRPWRLLVRDLEACVHPAVKAL
                     TLPKVPDGSFVRSVAEVLAEVEQEKGLPIGHTKLIVMVEDADGLANMDDIARAHPRVY
                     GMIVGAEDLAVSLRMAVDADGLYVPNVMAVAACRRAGIVPIGFVGSVADFADQEKFKQ
                     TVERAARLGFEGAFCIHPSQIDAANEAYSPEPAAVERARALVATFEAARAAHQATCTF
                     EGRMVDAPVVAQAHLLIERDDALKAMMARREAARRESD"
     gene            1778..2563
                     /locus_tag="VIC30_12920"
     CDS             1778..2563
                     /locus_tag="VIC30_12920"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011465867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY7805318.1"
                     /translation="MSQTDTANAGSDASVGSATCAVSNQLTDITALDIDRLPADWQSV
                     LAKPPATTQLSTIKAAIKAELNAANVIYPTDPWRALRLTPLSSIKAVILGQDPYHGPG
                     QAQGLAFSVGSQSKIPPSLKNIFLEIARDPLLHSDALTPTPEPDLSRWAKQGVLLLNT
                     SLTVRDGQAASHARLGWQVITDAIIKAVASNTTPTVFMLWGAHAQAKTELIQTHGRHH
                     RILLANHPSPLSARRPPVPFLGCGHFGLANQWLQEQGVEPVKW"
     gene            complement(2585..2944)
                     /locus_tag="VIC30_12925"
     CDS             complement(2585..2944)
                     /locus_tag="VIC30_12925"
                     /inference="COORDINATES: protein motif:HMM:NF017020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEPN domain-containing protein"
                     /protein_id="HEY7805319.1"
                     /translation="MARKDFDALRGMVGNDLFADEIFGFHAQQAIEKSLKAWLSLLDI
                     EFPFTHDISRLLALLEDVGADGVTAYLHLVEFTMFAVQARYEAGLMDDEQVLDRPTVI
                     TQVQALLSAVESLETKG"
     gene            complement(2967..3302)
                     /locus_tag="VIC30_12930"
     CDS             complement(2967..3302)
                     /locus_tag="VIC30_12930"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY7805320.1"
                     /translation="MSETENPMIREMVDAIVREVDPETVILFGSHARGNARSDSDVDL
                     LIVENEPFGPDRSRRKETARLYLALRRLPVAKDLLLYSRDEFEKFKHVRHHIIGQAQR
                     EGKVLHARS"
     gene            3398..3514
                     /locus_tag="VIC30_12935"
                     /pseudo
     CDS             3398..3514
                     /locus_tag="VIC30_12935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391879.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
     gene            3651..4154
                     /locus_tag="VIC30_12940"
     CDS             3651..4154
                     /locus_tag="VIC30_12940"
                     /inference="COORDINATES: protein motif:HMM:NF024734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HEY7805321.1"
                     /translation="MNIKHRILQSLRPRRDGVLLRSDVNDFGSPSQVSVAIRALIKEG
                     LIIRLDRGVYAKPDRLKQVGEKKLLEQAMVKMQQQRIQNQKQSRRFPSDPTSIYVRQL
                     AKREGIVFTPTYADLWAKAVTNLAGDDVKSDKTDDLLVALRRAGKLSARDMTRLVIAH
                     HRNLARV"
     gene            4147..>4880
                     /locus_tag="VIC30_12945"
     CDS             4147..>4880
                     /locus_tag="VIC30_12945"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEY7805322.1"
                     /translation="MFDPFGDFATEGYLRNFDKEKHLNIVKIAEHELFRAQLPTALAF
                     LATKKQIEYADFLEVHRILFEGLYPWAGKDRAEILPDSAIKKGELYFCHPNDCRRAIS
                     EGLSLAKDKKQMKKRPGFIMGMFAYGHPFLDGNGRTMLLVHAEFCFRANLSVNWMRTT
                     KQSYLEALTKEIQTPNDGHLDAYLKPFIEPKIPREKWMQRVAHLPGLDGVDVQSDVSA
                     GYCDPEIAKEYQEFERRRGYKLQDKYT"
BASE COUNT         1243 a         1297 c         1242 g         1098 t
ORIGIN      
        1 tacggccgcg tgttggtgga acgtgtagaa aagctgattc caccatcagt ttggaaacgg
       61 gcttattcag agatcaacgg gtttgaacaa cagttaagcc gcgatggcgt catcgtcgtg
      121 aaattctggc tggcaattac cgaagacgag caactcaatc gattcaacca acggcaaacc
      181 catccctata agcagtacaa actaaccgat gaagactggc gtaaccgcaa ccgctggcgc
      241 gcctatgaga cagctagcgc tgacatgttg gtgcacaccg ataccgccta cgctggctgg
      301 catttgatcg cagccaacga caagcgacat gcccgtgttg aagtcatcaa acagttggtc
      361 aaacgcatcg aagaggcgat caaacacgat gactgacaaa gccatcgcag ccacagcaac
      421 acaatgcccg ctttgccagc tgcccttgcc tggtgaactg gttagaggcg atcaatgggt
      481 catcatcgat gcgaacgagc caatgtttcc aggttttaca cgcgtggtct ggattgagca
      541 cgttcgagaa atgacggact tgtccacacg acaaagacaa gacttgatgg acgtggtgtt
      601 tgaggtcgag cagatcatgc gcacaagcct caatccacat aaagttaact tggcgagcct
      661 gggcaaccag gcacctcatg tgcactggca cgtcatccca cgctggagtg acgatgtcgc
      721 ctaccctggc ccagtctggg taagcggtca agacaccgat gcggcacaac aacggcgtgc
      781 gcaaactcaa agggcgctgg cggattatca tggggcgtta attcaacgtt tcaccgcata
      841 gccatcatga cccaactcaa tcctgacacc gcccctgcta acgccaccac cacctggcgc
      901 tcaatgctgt ttgtaccggc caatagtcag aaatttttga ccagtgcact aaagcgcgac
      961 gccgatgcca ttcagctcga tcttgaagat gcttgcccac cggatttaaa ggctgcaacc
     1021 cgccaacaga ttggtgagct ggccgagcaa tgtgcgcgag ccgggttcga tgtcattgtt
     1081 cgtgtcaacc gcccttggcg tttgctggtg cgtgatctag aggcctgtgt acatcctgca
     1141 gtcaaagcgc tgacgctacc caaagtacct gacggatcat ttgtgcgatc ggtagccgaa
     1201 gtgctagccg aggtcgaaca agaaaaggga ctaccgattg ggcacaccaa actgattgtc
     1261 atggtcgaag atgccgatgg cttggccaac atggatgaca tcgcgcgtgc gcacccgcgg
     1321 gtctacggca tgattgttgg cgctgaagac ttggctgtgt cattgcgcat ggccgttgat
     1381 gccgatggac tgtatgttcc gaacgtgatg gcggtggcag cttgccgccg cgctggcatc
     1441 gtccccatcg gatttgtggg ctcggtggca gattttgcgg atcaagagaa attcaagcaa
     1501 accgttgagc gggctgcccg acttgggttt gaaggggcct tctgtattca tccatcacaa
     1561 atcgatgcgg ctaatgaagc gtacagtcct gagccagcag ctgttgaacg tgctcgcgcc
     1621 ttggtggcga catttgaggc ggcgcgagcg gcgcaccaag ccacttgcac atttgaaggc
     1681 cgaatggtcg acgcgcccgt ggtggctcaa gctcacctac tgattgaacg cgatgatgcg
     1741 cttaaagcca tgatggcgcg tcgcgaagct gcccgccgtg agtcagactg atacggccaa
     1801 cgcaggtagc gatgccagtg ttggcagtgc tacctgcgct gtcagcaacc aactgactga
     1861 catcactgct ttagatattg atcgattgcc cgccgactgg cagtcggtct tggctaaacc
     1921 accagccacg actcagctat caaccataaa ggcggccatc aaggcagagt taaacgcggc
     1981 caatgtcatc tatccgactg atccatggcg tgcgcttcgc ttgacaccat tgtcttcaat
     2041 taaagctgtg atccttggcc aagaccctta ccacggtccg gggcaagcac agggcttggc
     2101 tttctcggtc gggtcgcaga gcaaaatacc accgagcctc aaaaacatct tccttgagat
     2161 cgcccgcgat ccgttgctgc actcagatgc actgacaccc acacccgagc cagacttaag
     2221 ccgctgggcc aaacaaggtg tgctgctgtt aaacacgtca ttgaccgtgc gcgatggtca
     2281 agccgcatca cacgcgagac ttggttggca agtgatcact gatgccatca ttaaggcagt
     2341 agcctctaac accacgccca cggtctttat gctttggggt gcgcatgcgc aagccaaaac
     2401 cgagctcatt caaacgcatg gcagacacca ccggattctc ttagccaatc acccctcgcc
     2461 gctatcggcc agaagaccac ccgtgccatt tctgggatgt ggacatttcg ggttggcaaa
     2521 tcagtggctg caggagcaag gtgtggagcc ggtgaagtgg tgatgtagaa ccagtgcgtg
     2581 cgcattaacc tttcgtttcg agactctcaa cggcggataa caatgcctga acttgagtaa
     2641 tgacagttgg tctatcaagt acttgttcgt catccatcag tccagcttcg taacgtgcct
     2701 gcacggcaaa catggtgaac tcgacaagat gcaagtacgc ggtgacgccg tcagcaccaa
     2761 cgtcttctag caatgctagc aagcgcgaaa tatcatgcgt gaacgggaac tcgatatcga
     2821 gcaacgaaag ccatgcttta agtgactttt ctatcgcctg ttgggcatga aacccgaaaa
     2881 tttcgtcggc aaacaagtcg ttaccaacca tgccgcgcaa agcatcaaaa tctttacgtg
     2941 ccattaccaa tagcgcgttt gcgtacctag gatctggcat gcaaaacctt tccctcacgc
     3001 tgtgcttggc caatgatatg gtggcgaaca tgcttgaact tttcaaactc atcgcggctg
     3061 tagagcagca aatctttagc cactgggagt cgacgcagcg ctaaatacag acgagccgtt
     3121 tctttcctgc ggctgcggtc aggtccaaat ggctcgttct caacaatcag caaatctaca
     3181 tccgagtcgg atcgtgcatt accccgcgca tgcgacccaa acaagatgac tgtctcaggg
     3241 tctacttcgc gtacgatcgc atcaaccatc tctcgaatca tcgggttttc tgtttcgctc
     3301 accttcatga ctccttgctg atttaccaac aggactaggg atttgccaca aacacaatga
     3361 tactcgagtt agtttgttta accacacgct cgtttaagac aacccctcgc cgctatcggc
     3421 cagaagaccg cccgtgccat ttctgggatg cggtcatttc gggttggcaa atcagtggct
     3481 gcaggagcaa ggtgtgaagc cagtgaagtg gtgaggtagt actagcagtt tgcccgacac
     3541 ttgctaacaa acaattaggc ttgttgacaa gactttgtag aacacaagca taagatttca
     3601 tataaccaat tgaattgatt aaatttttgt ttagttttat actaaaccgc atgaatatta
     3661 aacaccgcat cttgcaatca cttcgtcctc gacgagacgg tgttctattg cgttcggacg
     3721 tcaatgactt tggtagccct agccaagttt ctgtagcgat cagagcttta ataaaagaag
     3781 gtctcatcat ccgactggat cgtggtgtct atgccaaacc ggataggctg aaacaggttg
     3841 gtgaaaaaaa actgcttgag caagcaatgg tcaaaatgca acagcagcga attcaaaacc
     3901 aaaaacaatc ccgacgattt cccagtgacc ccacttccat ctatgtccgg caactggcta
     3961 aacgcgaggg catcgtattc actccaactt atgcagacct ttgggcaaag gctgtcacaa
     4021 acttagcggg cgatgacgtt aaaagtgaca aaacagatga cctattggtt gcactgagac
     4081 gcgctggaaa gctctccgcc cgtgacatga cgcggctggt catcgcacac catcggaacc
     4141 tggcacgtgt ttgatccgtt tggtgatttt gcgactgaag gatacctgcg caacttcgac
     4201 aaagagaagc atctcaacat cgtcaaaatc gcggaacacg agctgtttcg cgcgcagcta
     4261 cccacagcat tagcttttct tgccacgaaa aaacagattg agtatgccga cttccttgag
     4321 gtgcatcgca ttttgttcga aggcctctat ccgtgggctg gaaaagaccg agccgaaata
     4381 ttaccggata gcgccatcaa aaaaggggag ctttatttct gccatccgaa cgattgccgg
     4441 cgtgcaatct cggagggtct gtctctggcc aaagacaaaa aacaaatgaa aaagcgtcct
     4501 gggttcatca tgggaatgtt tgcatacggc catccatttc ttgacggcaa tggtcgaaca
     4561 atgctgctcg tgcatgccga gttttgtttt cgtgcgaatc tttcagtgaa ttggatgcgc
     4621 accaccaagc agtcttacct ggaagcactc acgaaagaaa tccaaacccc aaacgacggt
     4681 catttagatg catatctgaa gccgtttatt gagcctaaaa ttccacgtga gaagtggatg
     4741 cagcgcgtcg cccacctacc cggtcttgac ggcgtcgacg tgcagtcaga tgtctcagca
     4801 ggatattgtg atcctgagat tgctaaggag tatcaggagt tcgagcgccg gcgcggatac
     4861 aaactgcaag acaaatatac
//
LOCUS       DATBNL010000762         4882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_118739, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000762 DATBNL010000000
VERSION     DATBNL010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118739"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2053
                     /locus_tag="VIC30_12950"
     CDS             <1..2053
                     /locus_tag="VIC30_12950"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HEY7805323.1"
                     /translation="QEQTALASDTSWQDEGDIFGAFDRAWPGAQAYYRFHNATSGQYF
                     FEGNLNAVLQNARLDYGGISWYAAAFVAQPDELFFSRDDALVLTDYIRAESRLVTKGN
                     GSLTLAAGGHFSGGIEVAQGRLVVNGLLSGGDLTVRPGGTLGGNATIVNRVNIQGRLA
                     PGNSAGTIAFLAPVTMTAGSTLEIEVDGPTAGSGAGSYDRVVVLGSNNTFTAAGKVDV
                     LLRSISAPASNDFTPSIGQQFVGIVSAQGGIRDSFLGLQQPPSGLMAGTRLDLIYGNQ
                     SIDLVVTPANYGQLAAAGLSQTTNEQAVGSALDAFRPAAGVKPLGPAGEIFPALAPLP
                     GDQIAAALANFSGELYASLNSPIIESSRFMRQASLDRIRTGFGGVATSARVYANDGQS
                     LPGTSGNELASSASTLDRRAVGWAQPLGSWGQYSNDGNAAQLTYDTRGLLIGLDVPVT
                     DAWRLGTIAGFGHSNADVAQRDSSADINTYSLGLYGGGQWDRVGLRLGASYAWHDVSA
                     SRTVVFTGFSDDQSASYQAKSAQFFGELGYQLDFMPARTELFTGLAHVRLSTPYFSES
                     GGVSALQTKGSNSHTTFTTVGVRSEKTFNIRQIKTTARGMVGWQHASGDTTPTSTHAF
                     VLGPWFSVNGVAIAQNAAVLNAGIDLQVGQQATIGIYYEGQFASGSQQHSVSASLNVL
                     F"
     gene            complement(2252..2845)
                     /locus_tag="VIC30_12955"
                     /pseudo
     CDS             complement(2252..2845)
                     /locus_tag="VIC30_12955"
                     /inference="COORDINATES: protein motif:HMM:NF023330.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3422 family protein"
     gene            2949..3179
                     /locus_tag="VIC30_12960"
     CDS             2949..3179
                     /locus_tag="VIC30_12960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805324.1"
                     /translation="MYKNMLLRVDLSDPTTSGKALAAAIHLATPESTLHVVLVLPSFG
                     SLQVAGYFATDFEKRALKRLGHDLSAWIDAEV"
     gene            complement(3408..4403)
                     /locus_tag="VIC30_12965"
     CDS             complement(3408..4403)
                     /locus_tag="VIC30_12965"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7805325.1"
                     /translation="MINSTYNITQEFIAACQMLDIESDTVLQQAGLQNLLDDAESLYV
                     TPKQLAAVFDAITCAYGKDDIHLKLGNGFAKGAFGNAFLAMQCSETLREGVHRAARFK
                     EVLEPVKWTITESDETFSVSIRSLTPDFPFNGYFQVGCLLWLVQSCRNITAKHIVPKR
                     VFITDEVARQSELEQALGCPVVFNCHCLLEFSADDMTTRILSANRYMVNGLDIGVTVN
                     EDESATDKAFVSLVYNSVLEFLPSGVVTLERIAEHLSVSKRTLERRLSKQGKPFSEVV
                     RDCRLRMANHYLHQTRLPITEIAFLVGYQEINSFYRAFKGWSGRTPQEAREQRLN"
BASE COUNT         1154 a         1349 c         1258 g         1121 t
ORIGIN      
        1 ccaagaacag accgcattgg cgagcgacac ctcgtggcaa gatgaaggcg atatcttcgg
       61 tgcctttgat cgcgcttggc caggggcaca agcctattat cggtttcata acgccacctc
      121 tgggcaatat ttttttgagg ggaatctaaa cgctgtcctt cagaatgcca gattagacta
      181 tggcggtatc agttggtacg ccgcagcgtt tgttgcgcag ccagacgaac tttttttttc
      241 gcgtgacgat gcactcgtac tgacggatta cattcgagcc gaaagtcgac ttgtcacaaa
      301 aggtaacgga tctctgacgc tggctgctgg aggacatttc agtggcggca ttgaagtcgc
      361 acaaggcaga ctggttgtca acggcctgct ttcgggtggt gatctgactg ttcgacctgg
      421 aggcactctt gggggcaacg ccaccatcgt caaccgcgtc aacattcaag gcaggctagc
      481 gcctggcaac tccgcaggca ccatcgcttt tctagcgcca gtaaccatga ccgctgggag
      541 caccctagag atcgaagtcg acggcccgac cgcaggatca ggtgctggca gctatgaccg
      601 ggttgtggtt ttgggatcga acaatacatt caccgccgcc ggtaaagttg atgtgttgtt
      661 gcgtagcatc agtgcgccgg caagcaatga ctttacgcca tcgattggac agcaatttgt
      721 tggcattgtt agtgcgcaag gcgggattcg cgatagtttt ctagggttgc aacagccacc
      781 gagcggactc atggccggca cgcgcctgga tctaatctac ggtaaccaga gcatcgattt
      841 ggtggttaca cccgctaact atggacaact cgcagcggcc ggactctcac aaaccaccaa
      901 cgagcaagcc gtaggctcag cacttgatgc gtttcgcccg gcagccggtg ttaagccatt
      961 aggtccggct ggcgaaatct tccccgcact cgcaccgttg cctggtgatc aaatcgctgc
     1021 cgcactcgcg aacttttcag gtgagcttta cgcttcactg aattcgccca tcatcgaaag
     1081 cagtcgtttc atgcgtcaag cctccctaga tcgaatccgt accggatttg ggggcgtggc
     1141 cacttcagca cgcgtatacg caaacgacgg tcagtcgctg ccaggcacgt cgggcaacga
     1201 actggcatca tcagctagca cgttagatcg cagagcagtt ggctgggcac agcccttggg
     1261 tagctggggg caatacagca acgatggcaa cgcagcccaa ctgacttacg atacccgtgg
     1321 cctactcatt ggactcgatg tgccggtcac tgatgcatgg cgactcggca ctattgcggg
     1381 atttggccac tcgaacgcag atgtggcgca gcgcgattcc tcggcagata tcaacacgta
     1441 ctcgctaggc ttgtatggtg gcgggcaatg ggatcgggtt gggctgcgcc ttggcgcaag
     1501 ctacgcttgg catgacgtta gtgccagccg aaccgtcgta tttactggtt ttagtgatga
     1561 tcagtcagct tcttatcaag cgaaatcagc tcagtttttt ggtgaactcg ggtaccaact
     1621 cgatttcatg cccgcacgga ctgagctgtt tacaggactg gcacacgttc gccttagcac
     1681 gccctatttt tctgagtcag gcggtgtttc cgccctgcag accaaaggat caaactcaca
     1741 caccacgttc actaccgtgg gcgtgcgtag cgagaaaacg tttaacattc gacagattaa
     1801 gacaacagct agaggcatgg tgggctggca acatgcctct ggcgacacca cgccaacctc
     1861 tacccatgcg ttcgttttgg gtccatggtt ctcggtcaat ggcgttgcga ttgctcagaa
     1921 tgcagccgtt ctaaacgctg gcattgacct acaggttggt cagcaagcaa cgattggcat
     1981 ttactacgag ggacagtttg ccagtggcag tcagcagcat agtgtcagtg ccagcttgaa
     2041 cgtgctgttc tgactcatgc caagcatgat atttctaggt cattaatctg tgcccgcact
     2101 cgctcaagcc caagctttcg ggatagagcg gtttcctctt ggggcttcaa gtgaagatcg
     2161 tgttgatttt gcatcttacg ccctgccttt ggatttaggg atttcaacac caccgcatga
     2221 gcgtctgccc ccttccattg gccagttggg tttaagcctt ggtaatcacc ttgtaattgc
     2281 gtcgaaccac ttgccacacc ccgaacaccg tgggcacgat ggccacaccc gccacaattt
     2341 ctgatgagac gggcaaccaa ccggccgatt tcccggcctt gacgaggtag aaaatcaggc
     2401 tcaccacgca gtaggagatg gcggcaatgg acagatcttc aacggtttgc tgcaacttca
     2461 gttgcaacgc ttgggcaagc gtaagttttt ccaggatctg ccgattccgt tgctcggtca
     2521 taatatcgac ccgagtgcgc aacaaatcac tgacccggct gacacgatca gacaaggaat
     2581 cgagccgttt gactgtggca tccaccgtgg ccatggcggg cccaagtcgc cgctagataa
     2641 acgccccaac ggtttgaaca cccggcacag gggtttggcg caactctttg atccgctgca
     2701 acacgatgtc atgatacgca gccgtagcag aaaaccggta gttgtggtct gcgttggcgc
     2761 gctcgatggt agccgcaagc gatgccagat catgcaacaa atcgtgattc tgactggtac
     2821 tgctctcgtc ctcatgcgca atcgaggcga gctgattctt gttgcaattg gattattgtt
     2881 actagtaatt gtgttgcacc gccgtcgtca aaccaagccc gctttttagc tacgcgccaa
     2941 gaggcatcat gtacaagaat atgctgctgc gggtcgatct gtcagatccc acgacatccg
     3001 gcaaggcttt ggctgctgca atccacctcg ccacacccga atcgacattg cacgtggtgt
     3061 tggtactgcc tagctttggg agtctgcagg tcgcaggcta ctttgccacg gattttgaga
     3121 agcgggcact caagcggctc ggtcatgacc tgtcggcatg gattgacgcc gaggtttgag
     3181 aaggtaaatc ctgatatttt tttgttactt ttttgcgacg gctattgtgc gactgaacac
     3241 caggccgcct gtcgatagcg cgtgatgcca acgcaaacca ccaatacaaa ccaccaatac
     3301 aaaccacgta tcattcgaat agcgaccatc ggtaattttc cacctggctc gatcgattgc
     3361 cctcagtgag cgcgcaaaca ctcgcgttgg gctagatcac tgtctggtca gttcagacgc
     3421 tgctcacggg cctcctgagg tgttcgaccg ctccagccct taaacgcacg gtaaaacgaa
     3481 tttatttcct ggtaacccac caaaaaagca atttcggtga tgggcaagcg agtttggtgc
     3541 aaatagtggt ttgccatgcg caaacgacag tcacgcacga cctcgctaaa gggcttgcct
     3601 tgctttgaca atcggcgttc gagcgttcgt ttgcttaccg aaaggtgctc ggctatccgc
     3661 tccagagtca ccacgccaga gggcaggaac tcgagaacac tgttatagac cagcgacacg
     3721 aaggctttgt cggttgcgct ttcatcctca tttaccgtca caccgatatc gaggccgttg
     3781 accatgtagc ggtttgccga caggatccgt gtcgtcatgt catcggccga gaactcgagc
     3841 aagcagtgac aattgaatac aacgggacag ccgagcgcct gctcgagctc cgactgacgg
     3901 gcaacctcgt ctgtgataaa cacccgcttg ggcacgatat gtttggccgt gatattgcgg
     3961 caactttgaa ccaaccacaa aagacacccg acctgaaagt agccattaaa gggaaaatca
     4021 ggggttaacg agcgtatgct tactgagaac gtttcgtcag actcggtgat tgtccacttc
     4081 actggctcaa gcacttcttt aaaacgagcc gcccggtgca cgccctctct tagcgtctcg
     4141 ctgcattgca tggcgagaaa ggcattaccg aacgcccctt tcgcaaaacc gttgcctagc
     4201 ttgaggtgaa tatcgtcttt gccatacgca cacgtaatag catcaaaaac agccgcaagt
     4261 tgcttggggg tcacatacag cgattccgcg tcatctaaca aattttgcag acccgcttgt
     4321 tgcagaaccg tatcagactc aatgtcgagc atctgacagg cggcaatgaa ttcttgagtg
     4381 atgttgtaag tgctgttaat cacgataacc gtcttccccc ttagccacag acagatcaaa
     4441 tcacatcatc atgccccaac gttcatgaaa gaacggacat aaacaaccaa attaagcact
     4501 gctcccccga aacacccagc cttggccgac gcaaccgaaa cgcgtcacga gccgatgttt
     4561 ggctatccca cgacaaccct agaacgaggc gagagtcttc gtattgggtc aacaagctta
     4621 gacccacaca aaaccacgat acgacacgag gcgcaactgc tgcgctgcac tgcgcaacat
     4681 tgaaaacgac tacctcaccg gcctttgcca accaaaaaca aggcgtttcg actaacaata
     4741 taacttagcc atgaaacgac caagagaaag atgtgctgtc gttgtgttgc taaacaccga
     4801 cagtcttcta atggctattg ctaataggcg gcttctcatc agccctccat gtaagcgtcc
     4861 cccgatacgc gatctccaca ga
//
LOCUS       DATBNL010000763         6415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_178271, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000763 DATBNL010000000
VERSION     DATBNL010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6415
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178271"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VIC30_12970"
     CDS             <1..388
                     /locus_tag="VIC30_12970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011809304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY7805326.1"
                     /translation="NDIAQWVLSISTSPWVFLLLANGLLLFVGCFMETIAAITILVPV
                     LLPIVLELGIDPVHFGIVMVLNLMIGLVTPPVGMVLFVMARISRIGFEATMKAVLPWL
                     LPLILTLLIITFVPEVVMWLPDLLYR"
     gene            458..2008
                     /locus_tag="VIC30_12975"
     CDS             458..2008
                     /locus_tag="VIC30_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019656869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="HEY7805327.1"
                     /translation="MPADAAIQVIRKPTLRLNPIDDVVIATRPLSAGTSIADEGVTCT
                     DAIAPGHKVAVKAIGVGEPVRRYGQIIGFATKAITPGEHVHTHNLVFETFERDYAFGQ
                     DLPAAPEPKRATFMGYKRADGRVATRNYIGVLSTVNCSATVSRAVADYFDRRRNPDAL
                     APYDNIDGVIALTHGTGCGMDTEGLGLKILERTMAGFARHANMAAVIVIGLGCEGNQI
                     KSWLEHSHLNEGGALKVFNIQDSGGTRHTVQKGIELIETMLPEVNDVKREPCCISNLV
                     LGLQCGGSDGYSGITANPSLGVAVDLLVAHGATAILSETPEVYGAEHLLTRRAVTQAV
                     GQKLVTRIKWWEGYTAMFNGSMDNNPSPGNKAGGLTTILEKSLGAVAKCGTTALVDVY
                     EYAEPITAKGFVFMDTPGYDPVSVTGQVAGGANVICFTTGRGSAYGCAPSPSLKLATN
                     SALWQKQEEDIDINCGSIIDGDYSVQEMGQMIFDEIVAVACGERTKSERHGYGQNEFI
                     PWQIGTVM"
     gene            2008..2817
                     /locus_tag="VIC30_12980"
     CDS             2008..2817
                     /locus_tag="VIC30_12980"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY7805328.1"
                     /translation="MAPIDKSTEAETSMPANPFSYPPIQDQVALVTGANSGMGLATVK
                     ALLVAGYRVVGTDVATHTLQTDCHTALEAGRLMVATMDVSDPAMVKEVCARAHEWHGH
                     IDVLVNNAGILQYADCETTTPELFRQTLAVNLEGVFYVSQQLAPQMAARGFGRIVNVA
                     SFGAKTGGLSPIPAYAASKGGVVSLTFSFARQYAKQGVTCNAIAPTFVKTQMLTEQVS
                     AERQQELRKMILVNRFCELEEFAHCVLFLAHPMSGFITGEVLDLNGGIQFD"
     gene            2827..4383
                     /locus_tag="VIC30_12985"
     CDS             2827..4383
                     /locus_tag="VIC30_12985"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HEY7805329.1"
                     /translation="MNTPISTSPTESVVPVPLSEPSAKRVASDLGGQAFVYHPRPDQP
                     LDAQPQVVHLGLGGFHRAHQAMVFDALMAGGSAGVRAGENSPWQICAVGMRSDKLAKQ
                     LKVQDYLYLVRVSDDSGSRWHAPSAIVKTLVAASQRDAVIDQIANAKTRWVTLTVTEK
                     AYTPELARLIVDGLAKRQAEGLGGLTIASCDNLPDNGHVLQALCLEQARTSTAAPDLC
                     DWIQTECRFPCSMVDGIVPAPSAEVRQAARTDLGLDDPSALGVEAFWEWVIEDAFVVP
                     SDADALRSVGVVVSNDVAGFEQAKLWMLNGSHTVLASAGVVLGDAYIRQVIARPVMKQ
                     FIHGYMTHASGPLVGRPNWQVYRDALIKRFSNPMLDHACLQVYSDSSLKIPVRWLPVG
                     ERLLGRRKQDLNHEQADDAGLNYLAMAVAIFARSLWPVNQAGDPFVFNDPLAGELQVL
                     AKDQHVDPAGVIEQLLRQSNVKWAIFGLELGRDIRFVETATHWLAQIHANGLEPSLQL
                     FNQTGARQQQ"
     gene            4383..5666
                     /gene="manD"
                     /locus_tag="VIC30_12990"
     CDS             4383..5666
                     /gene="manD"
                     /locus_tag="VIC30_12990"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0016052 - carbohydrate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-mannonate dehydratase ManD"
                     /protein_id="HEY7805330.1"
                     /translation="MKFVKEPPTVLPTAPARASETAYTTLITDVRVVVCSPGRNFVSL
                     VVQTDGGVTGYGDATLNGRELAVASYLQAYVVPLLIGRDAARIEDTWQMLYRGAYWRR
                     GPVTMTAIAAVDMALWDIKAKCAGMPLYQLLGGRSRERMLVYGHATGRDIEETIDAVA
                     RLKDEGYVAIRAQSGVPGLSKVYGVSQSGQAYEPADGELPSVEAWDTVAYGRHVPKLF
                     EALRVAFGDELHLLHDAHHRLSPNEAAQLAKSLEPYQLFWLEDVTPADNPESLRRVRS
                     QSTTALAIGEVFNSIFDCKGLIEEQLIDYIRASIVHAGGITHWRRIAEFAAIYQVRTG
                     CHGATDLSPITMGCALHVGAWLPNFGIQEHMPHQSPVQEVFTVDYRFEDGYMYCGESP
                     GHGVTVNEEVAKQFPYKRAYLPINRLKSDGSMWDW"
     gene            5771..>6415
                     /locus_tag="VIC30_12995"
     CDS             5771..>6415
                     /locus_tag="VIC30_12995"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HEY7805331.1"
                     /translation="MNKSSISKEALSAKPYQQTADRIRVLIKEHGYEPGVRLPSEREL
                     ADLLKVSRPTLREALIALEVEGVIQIRMGSGVYLSRPRKTPAATPKKVAKLKSDMSPF
                     QLLEARRLVESEVAALAAVSRTPEHVRQMREIIKDMEARAKAGKDPLVSDHRFHVLLA
                     QASGNQVMAGLVNQLFMARLGVLFSRLSTYFDTGSSWNEAIREHKAIVKAIHAQD"
BASE COUNT         1374 a         1644 c         1885 g         1512 t
ORIGIN      
        1 caatgatatt gcacagtggg tgctctcgat tagcacgagc ccgtgggtat ttttgttgct
       61 ggccaacggt ttgctgttgt ttgtgggttg cttcatggaa accattgctg ccatcacgat
      121 tttagtgccc gttttgctgc cgattgtgct tgaacttggc attgatccgg ttcactttgg
      181 gattgtgatg gtcttaaacc tgatgatcgg tttggtcaca ccacccgtgg gcatggtgct
      241 ctttgtcatg gccaggattt cgaggattgg atttgaggca acgatgaagg cggtgctgcc
      301 ttggttgctt ccgcttatcc taacgttatt gattatcacc ttcgtgcctg aggtggtcat
      361 gtggctgcct gatttgctct accgttgatt gttgtttatt gactgttgtt cactgttgtt
      421 cattcttttt tgattgtttt tttggaaaca ccgaattatg cctgctgacg ctgccattca
      481 agttattcgc aaacccacct tgcgtttgaa tccgattgac gatgtggtca ttgccacccg
      541 gccattgagc gctggtacat cgattgccga tgaaggggtg acttgtacag atgccattgc
      601 gcccgggcac aaagtcgccg tcaaggccat cggggtgggt gagcctgtgc gtcgctatgg
      661 ccaaatcatc ggctttgcca ccaaagcgat tacgccaggc gagcatgtgc acacgcacaa
      721 cctggtgttt gaaacctttg aacgagacta tgcgtttggc caagatctgc cggctgcgcc
      781 tgaacccaag cgcgcgacct tcatgggtta taagcgcgcc gatgggcgtg tggccacacg
      841 taactacatt ggggtgctct ccacagtcaa ctgttcggca acggtttcgc gtgcggtggc
      901 cgattacttt gatcgtcgtc gcaacccgga tgccttagca ccgtacgaca acatcgatgg
      961 tgtcattgca ctgacccatg gcacggggtg tggcatggac acagaggggt tgggtctgaa
     1021 gattctggag cgcaccatgg ctggcttcgc gcgtcatgcc aacatggccg cggtgatcgt
     1081 cattggcttg ggctgtgaag gcaatcagat caagagctgg ctagagcatt cgcacttaaa
     1141 cgagggtggg gcactaaagg ttttcaatat ccaggacagt ggtggcacgc gccacaccgt
     1201 gcaaaagggc attgagctga ttgagacgat gttgcctgag gtcaatgacg tcaagcgcga
     1261 gccttgttgc atctctaatc tggtgctcgg gctgcagtgc ggcggttcag atggttatag
     1321 cggcattacc gccaacccgt ccttgggtgt cgcggttgac ctgcttgtcg cccatggggc
     1381 aaccgctatc ctgtctgaaa ctcctgaggt ctatggggcg gagcatttgc tcacacgccg
     1441 ggccgtgacc caagctgttg gacaaaagct tgtgacacgc atcaaatggt gggaaggcta
     1501 caccgctatg tttaacggca gcatggataa caacccctcg cccggtaaca aagcaggcgg
     1561 cttgaccacg attcttgaga agtccctcgg tgccgtggcc aaatgcggta ctaccgcttt
     1621 ggtggatgtg tatgagtacg ccgaaccgat tacggccaaa gggtttgtgt tcatggatac
     1681 cccgggctac gacccggtga gcgtcaccgg tcaagttgcc ggtggcgcca atgtgatttg
     1741 ttttaccact ggccgaggct cagcctatgg ctgtgccccg tcaccgtcac ttaaactcgc
     1801 gaccaatagt gcgttgtggc aaaaacaaga agaagacatt gatatcaact gcggctcgat
     1861 catcgatggt gactacagcg ttcaggaaat gggacagatg atatttgatg agatcgtggc
     1921 agtggcctgc ggtgagcgca ccaagagcga gcgccacggt tatggacaaa acgagttcat
     1981 cccctggcaa atcggcacgg tgatgtgatg gcacctatcg acaaatccac cgaggccgag
     2041 acctccatgc cggccaatcc cttcagttac ccaccgatcc aggatcaggt ggccttggtc
     2101 actggcgcca attcaggcat gggcttggcc acggtcaaag cgctgcttgt agctggctac
     2161 cgggtggtgg gcaccgatgt cgctacccac acgctacaga ccgattgcca caccgcgcta
     2221 gaagccgggc gcctgatggt agcgaccatg gatgtctcag acccagccat ggttaaagag
     2281 gtgtgtgcca gggcgcatga atggcacggc cacatcgatg tgttggtcaa taacgccggt
     2341 attttgcaat acgccgattg tgaaacgacc acgcctgagc tatttcgcca gacattggcc
     2401 gtgaacctgg agggggtctt ttacgtcagt cagcagttgg ccccgcaaat ggcagcacgc
     2461 ggttttgggc gcattgtgaa tgtggcctca tttggcgcca agacaggagg cttgtcacca
     2521 attccggctt acgccgcctc caagggcggg gtggtgagcc tgacctttag tttcgcgcgc
     2581 cagtatgcca aacagggtgt cacgtgtaat gccattgcac cgacttttgt aaaaacccag
     2641 atgttgaccg aacaggtcag cgcagagcgc caacaagagc tgcgaaagat gatcctggtt
     2701 aaccgtttct gtgagcttga ggagtttgcc cactgtgtct tatttctggc gcacccgatg
     2761 tcgggtttca ttacaggcga ggtgcttgat ttaaatggcg ggattcaatt cgactagggt
     2821 gggcccatga acacgccgat aagcacgtcc ccgacggaat cggtggttcc ggtgccgctg
     2881 tccgagccca gcgcaaagcg agtcgcctct gatctcggcg ggcaggcatt tgtctatcac
     2941 ccgcgccccg atcaaccact tgatgcacaa ccccaggttg tgcatctcgg tttgggtggg
     3001 tttcatcggg cgcaccaggc gatggtgttt gatgcgctga tggctggtgg tagtgctggt
     3061 gtaagggcag gtgagaacag cccatggcaa atctgtgccg ttggtatgcg cagcgacaaa
     3121 ctagccaagc aactaaaggt tcaggactat ttgtatctgg tccgagtctc agacgacagc
     3181 ggttcgcgct ggcacgcccc aagcgcgatt gttaaaacgc tcgtggcagc cagccaacga
     3241 gacgccgtca ttgatcagat tgccaatgcc aagacccgat gggtgacgct taccgttaca
     3301 gaaaaagcct acacacctga acttgcgcga ctgatcgttg atggtctggc caaacgccag
     3361 gccgaaggcc taggcgggct taccatcgcc tcttgtgaca acctgccaga caacggtcat
     3421 gtgctgcaag ccctgtgtct ggaacaagcg cgaaccagca ccgctgcccc agatctttgc
     3481 gattggatac aaaccgaatg ccggtttcct tgcagcatgg tcgacggcat tgtgcctgca
     3541 ccaagcgccg aggtgcgcca ggctgctcgc acagatctcg gattggatga ccccagcgcc
     3601 ttgggggtgg aggcgttttg ggagtgggtg attgaagacg cttttgtcgt tccatcggat
     3661 gctgatgcgt tgcgctcggt gggtgtggtg gtatcgaatg atgtggctgg gtttgagcag
     3721 gcaaagctct ggatgctaaa tggcagtcat acggtgttgg ccagtgccgg cgtcgtattg
     3781 ggcgatgcct acatccgtca ggtgattgcc agacctgtga tgaagcaatt cattcatggt
     3841 tacatgaccc atgccagtgg gcccttggtg ggtcgaccaa actggcaggt ttatcgcgat
     3901 gcgttaatca agcgttttag caatcccatg cttgatcacg cttgtttgca agtctactca
     3961 gactcctcgc taaaaattcc tgtgcgctgg ttgccagtcg gagagcgttt gctcggcagg
     4021 cgcaaacagg acctgaatca cgagcaagcc gatgacgcag ggcttaacta cctggcgatg
     4081 gctgtggcga tatttgcgcg cagcctctgg cccgtgaatc aagcgggtga tccatttgta
     4141 tttaacgatc cgttggcagg tgaattacag gtactggcca aagaccagca tgttgatccg
     4201 gcaggcgtga ttgaacagct tttacgccag tccaacgtga agtgggcgat ttttggtctt
     4261 gaactgggac gagatatcag gtttgtagaa actgcgacac attggttggc gcaaattcat
     4321 gccaacggtt tagagccgag tttgcagctc tttaatcaaa cgggtgcgag acagcaacag
     4381 tgatgaagtt cgttaaagag cctcccacag tgctgcccac ggcgcctgct cgagcgtcag
     4441 agactgcata caccacgctc atcacggatg tccgtgtggt ggtctgctct ccaggtagaa
     4501 actttgtcag cctggtggtg cagacagacg gcggggtgac gggttatggg gatgcaaccc
     4561 ttaatggccg cgagttggcc gtagcgagct atttgcaagc gtacgtcgtg cccctgctga
     4621 ttggtcgcga tgctgctcgt atcgaagaca cctggcagat gctttaccgt ggtgcctatt
     4681 ggcgccgtgg gcctgtgacc atgaccgcca ttgccgcggt agacatggca ctttgggaca
     4741 tcaaggccaa gtgcgccggc atgccgctgt atcagctgct tggtgggcgc agtcgtgagc
     4801 gtatgctggt ctatggccat gccacaggcc gagacatcga ggagaccatc gatgcggtag
     4861 cgcgactgaa agacgaaggt tatgtggcca ttcgcgccca aagtggtgtg cccggtctaa
     4921 gtaaggttta tggggtgagt caatccgggc aggcttatga accagcagat ggtgagttgc
     4981 cgagcgttga ggcgtgggac acggtggctt acgggcgcca tgtgcctaaa ctatttgaag
     5041 ctttgcgggt cgcgttcggt gatgaattgc acctactgca cgatgctcac catcgcttaa
     5101 gccccaatga ggcagcacaa ctagcaaaaa gcctggaacc ctaccagctg ttctggttag
     5161 aagacgtcac cccggcagac aaccccgaga gcttgcgccg ggtgagaagc caaagcacca
     5221 ccgccttggc cattggcgaa gtgtttaact caatttttga ttgcaagggc ttgatcgagg
     5281 agcaactgat tgactatatc cgtgcttcaa tcgtgcatgc cgggggtatt acgcactggc
     5341 gacgtattgc cgaatttgcc gcgatttacc aagtgcgcac cggttgccat ggggccaccg
     5401 acctgtcacc gattaccatg ggttgtgcgc tgcacgttgg cgcatggttg ccgaatttcg
     5461 ggattcagga gcacatgcca catcagtcac cggttcaaga ggtgttcacg gtcgactatc
     5521 ggtttgaaga tggctacatg tattgtggtg agtcacctgg ccatggggta acggtcaatg
     5581 aggaagtggc taagcaattc ccttataaac gggcgtatct gccgattaat cggctaaaaa
     5641 gcgatggatc catgtgggat tggtaggttt gtttaaactt tggggtttgg cacgctgata
     5701 cacgttgctt cgatttgtgc aattgcgatt gacgacttca gcatccgatc caccttgccg
     5761 tgcattaaac atgaacaaat cctctatcag caaagaagcc ttatcagcca agccgtatca
     5821 acaaacagct gaccgtattc gcgtcctcat caaagagcac ggctatgagc caggcgtgcg
     5881 cttgccttca gagcgggaat tggctgatct gctgaaggtc tcacgtccca ccttaagaga
     5941 agcactgatt gcgctagagg tcgagggcgt gattcagatt cgcatgggca gtggggtgta
     6001 cctgagtaga ccccgtaaaa ccccggccgc gacccctaag aaagtcgcca agcttaaatc
     6061 tgacatgagc ccgtttcagt tgcttgaagc acgtaggctc gttgaatccg aagtcgccgc
     6121 tttggcggcc gtttcacgca cgcccgagca cgtgcgtcaa atgcgagaaa tcatcaaaga
     6181 catggaagca cgcgccaagg caggcaaaga ccccctagtg tcagatcaca ggtttcatgt
     6241 actgttggct caagccagtg gcaaccaggt catggcaggg ctggttaatc aactctttat
     6301 ggcgcgcctc ggcgtgttgt tctcccggct ctcgacgtat tttgatacgg gcagctcatg
     6361 gaatgaggcc attcgcgagc acaaggccat tgtcaaggcg atccatgccc aagac
//
LOCUS       DATBNL010000764         1560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_198086, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000764 DATBNL010000000
VERSION     DATBNL010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198086"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VIC30_13000"
     CDS             <1..778
                     /locus_tag="VIC30_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012733020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY7805332.1"
                     /translation="SALLPKLTQKNDDKFLTACLAHYQQSRKELDALAVIKPGDSKIH
                     PQAVARLLSEKASDDAVFTCDVGTQTVWAARYLKMNGKRRLLGSFNHGSMANAMLQAI
                     GAQVTCPNRQIISMSGDGGFAMMMGDCLSLKQLGLPVKLIVLNNGTLGFVEMEMKANG
                     FLDTGVDLDNPNFAAMANAIGIHGVRVEDPTKLESTIEEVLNHPGPALLDVVSARQEL
                     AMPPKIELEQASHFGLFMLKAVMDGRGHEVVDLAKENLRL"
     gene            915..>1560
                     /locus_tag="VIC30_13005"
     CDS             915..>1560
                     /locus_tag="VIC30_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008919996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEY7805333.1"
                     /translation="MTDVRKEADSLGVVEVPADKLWGAQTQRSLEHFSIGRDLMPREM
                     ITAYAILKKACAQVNQASKRLPDQQHDLIVKGCDEILAGQHHDMFPLHVWMTGSGTQF
                     NMNVNEVISNRCCQISGTDLGSKAPVHPNDHVNMSQSSNDSFPTAMYIATAVNTTERL
                     MPAVTKLRDAMALKVDAWKDIVKIGRTHMQDATPLTLGQEWSGYVGMLDDGLLRI"
BASE COUNT          413 a          415 c          385 g          347 t
ORIGIN      
        1 cagcgccctg ttgcccaaac taacccaaaa aaacgacgac aagtttctga cggcttgttt
       61 ggcacattac cagcaatcaa gaaaagagct tgacgcactt gcggtcatta aacccggtga
      121 ctccaaaatt cacccgcaag ccgttgctcg cctacttagc gagaaagcct cagacgatgc
      181 cgtttttacc tgcgatgtgg gcacacaaac ggtgtgggct gcgcgttacc tcaagatgaa
      241 tggcaagcgt cgcttattag gttcctttaa ccacggctct atggccaacg ccatgctgca
      301 agccattggc gctcaagtca cctgccccaa ccgccaaatc atttccatgt ccggcgacgg
      361 tggatttgcc atgatgatgg gtgactgctt gagcttaaag cagcttggcc tgcccgtgaa
      421 actgattgta ttgaacaacg gcaccttggg ctttgtggag atggagatga aagccaatgg
      481 ttttctggat accggcgttg acttggacaa cccgaatttt gcggccatgg caaacgccat
      541 cggtatccat ggcgtacgag tcgaagaccc caccaaactc gaaagcacaa tcgaagaagt
      601 acttaaccat cctggtccgg ctttgcttga tgtagtaagt gccagacaag aacttgccat
      661 gccaccgaaa atagagctcg agcaagcctc gcatttcggg ctctttatgc tcaaggccgt
      721 gatggatggt cgtggccatg aggtcgtcga tctagccaaa gaaaatctgc ggctgtgagt
      781 taaaagaaaa agtagaagta caggtgtgta acggcgccag cactcaaagt aaactcaaag
      841 cgaactcaac gatccgctgg cgtctctatt ggtttacatg accagattaa ctttatcctt
      901 ccgaggtaat cctaatgacc gatgttcgca aagaggctga tagtctaggc gtcgtagaag
      961 taccagcaga caagctctgg ggggcacaaa cccagcgctc tttagagcac ttcagcattg
     1021 gccgtgactt aatgccgcgc gagatgatca ctgcctacgc catccttaaa aaagcctgcg
     1081 ctcaagtcaa ccaggccagc aagcgtttgc ctgatcaaca gcacgactta attgtcaaag
     1141 gctgcgatga aatcttggcc ggccagcatc acgacatgtt tcccttacac gtctggatga
     1201 caggcagtgg cacccaattc aacatgaacg tcaatgaagt gatttccaat cgctgttgcc
     1261 aaatctctgg cactgacttg ggtagtaagg cgcccgtgca tcccaacgat cacgtcaaca
     1321 tgtcgcaatc gtccaatgac tctttcccca cggccatgta tatcgcgacg gctgttaaca
     1381 ccacagaacg gctaatgccc gcagtaacta aactacgcga cgccatggca ctcaaagtag
     1441 atgcttggaa agatatcgtt aagattgggc gcacgcacat gcaagacgcc acaccattga
     1501 cgcttggtca agagtggtca ggctatgtcg gtatgctcga cgatgggttg ctgcgcatcg
//
LOCUS       DATBNL010000765         1832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_89474, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000765 DATBNL010000000
VERSION     DATBNL010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89474"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1362)
                     /gene="alaS"
                     /locus_tag="VIC30_13010"
     CDS             complement(<1..1362)
                     /gene="alaS"
                     /locus_tag="VIC30_13010"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEY7805334.1"
                     /translation="MQVSDIREKFLTYFESKGHTIVPSASLVPGNDPTLLFTNSGMVP
                     FKEVFTGQESRSYKRATSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFK
                     REAIGYAWELLTTVYQLPADRLWITVYQEDDEAYDIWAKEIGVPVDRIIRIGDNKGAR
                     YASDNFWQMADTGPCGPCSEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFDRD
                     ADGVMHPLPKPCVDTGMGLERIAAVLQHVHSNYEIDLFERLIKAAARETACQNLQDNS
                     LKVIADHIRACAFLVVDGVIPSNEGRGYVLRRIIRRALRHGYKLGQSKPFFHRLVEDL
                     VAEMSQAYPELVEQSARVTKVLLQEEERFGETLENGMRILDEALGKLQAEEMLDGQTL
                     FMLYDTYGFPVDLTADICREKSIEVDMAAFEVAMGKQRDQARAAGRFKAADGLQYDGE
                     QTVF"
BASE COUNT          452 a          548 c          426 g          406 t
ORIGIN      
        1 aaaaaccgtc tgctccccat cgtattgcaa accgtcagcg gctttgaagc gcccggctgc
       61 ccgagcctgg tcacgctgct tacccatggc cacttcaaag gcagccatgt caacttcaat
      121 cgatttctct cgacaaatat cggcggtcag atcaaccggg aacccgtagg tgtcgtagag
      181 cataaaaagg gtctggccat cgagcatttc ttcagcctgc aatttgccta aggcctcgtc
      241 gagaatgcgc atgccgttct caagcgtctc gccaaaccgc tcttcttctt gcagcaacac
      301 cttggtgacg cgcgcagatt gctcaacgag ctcaggataa gcctgactca tctctgcgac
      361 cagatcctca accaatcggt gaaagaacgg cttggactga ccgagtttgt aaccgtgacg
      421 cagtgcacgc cggataatgc gcctgagcac atagccacgc ccctcgttac ttggaatcac
      481 cccgtcaacc actaaaaatg cgcaggcgcg gatgtggtca gcaatgactt taagcgagtt
      541 gtcttgcagg ttctgacaag ccgtttcacg ggcggctgcc ttgatcaaac gctcaaagag
      601 atcgatctcg tagtttgaat gtacatgctg caacacagcg gcaatgcgtt ctagtcccat
      661 accggtatca acacacggct tgggtagcgg atgcatcaca ccatcggcgt cacgatcaaa
      721 ctgcatgaac accaggttcc agatctcgat gtaacgatca ccatcctctt cgggcgagcc
      781 tggtgggcca ccccagacgt ctgggccatg gtcataaaag atttctgagc acgggccaca
      841 tgggccggtg tcggccatct gccagaagtt atctgaggca tagcgtgcac ccttattgtc
      901 tccaatccgg atgatgcgat caacgggcac accgatttcc ttggcccaga tgtcataggc
      961 ttcgtcatct tcctgataga ccgtgatcca caggcgatca gccggtaact gataaaccgt
     1021 tgtcagcagc tcccaggcgt aaccaatggc ctcgcgcttg aaatagtcgc cgaagctaaa
     1081 gttacccagc atctcaaaaa acgtgtgatg ccgcgcggta tagcccacat tctcgaggtc
     1141 gttgtgcttg ccaccggcgc gcacactgcg ctgcgaactc gtggcccgct tatacgaacg
     1201 actttcctgg ccggtaaata cctctttgaa cggcaccatc cccgagttgg tgaacaacag
     1261 ggtcgggtcg ttacccggca ccaaagacgc cgagggcaca atggtgtgcc ctttgctttc
     1321 aaagtacgtt agaaactttt cacgaatgtc agagacttgc atagccagct aatccaatac
     1381 agacaagatt tgctgattat aggcgttgac acaaataccc atcacgcaat tccacagcac
     1441 caacgcgacc acggtcccct acagccttga ctggcgcgaa acctgcatca caatcgcagt
     1501 ttggtccgag gtccaataac cgatcccatc ccgtatattt aaaccatgct ctgcgaaacg
     1561 cctgttcgcg cgcttgtggc aaacacgcgc gcaaatgatc atgtggttct tcaacggact
     1621 gccactgacc tttacgacaa acacgcaaat tgcctttcgg acccagcatc acaagccctg
     1681 caggactgca agacccttga ccctgagtca attgacccag aaccacacca ccggccagcc
     1741 taacctgccg tgattcgttc acatggtaag caatgggttc aactgttcca tcaaatccta
     1801 caaatatttt gagcatctat ctattatctc tt
//
LOCUS       DATBNL010000766         2411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_59203, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000766 DATBNL010000000
VERSION     DATBNL010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59203"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1415)
                     /locus_tag="VIC30_13015"
     CDS             complement(60..1415)
                     /locus_tag="VIC30_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012747171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEY7805335.1"
                     /translation="MNQPFFVGCGAGFSGDRVDAAKPVVDTLIKRGMPSALIFENLGE
                     RTLAAQQLTKRANPQLGYEPLLDLELRPILADCLVNGITIVSNFGAANPEAAARRILT
                     LAQELGLDSPRIAVVTGDDLSTEAGQAMVKQRLGDRFDAKQFICANAYQGAREICDAI
                     LAGAQIVVTGRVSDPSLTLGPAMAHFGWADDDWDVLAGASMAGHLIECGAQVTGGYFA
                     DGVHKQVAGMDNIGFPIAERFSDGTCVLGKADNTGGLVNAASVKEQLLYEVHDPACYI
                     TPDVVADMTSAQVTDLGSDRVRLSGVKGHPRTSTLKVNVFFDGGWLGEGEISYAGSHA
                     EARARLAIDTLKKRLKRQHQLELRADLIGICSVFNDDASHLLDAKAIGQQSDVRARVA
                     AEHLEREPIEALMREVTAMWTCGPAAGGGVRVNKRQRLSTTSCLIEREHLPAQFELIS
                     S"
     gene            1657..>2411
                     /locus_tag="VIC30_13020"
     CDS             1657..>2411
                     /locus_tag="VIC30_13020"
                     /EC_number="1.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEY7805336.1"
                     /translation="MNIAIVGSGLIGQAWAIVFARAGLQVRLWDGDSQALADAKTIIA
                     QQLQALEAHHLVDNAAHAITCIQTCESLAQALENAHYVQENLPERLDVKCDIYATMDD
                     MAAPDTILASSTSGIPASAFTESLANRQRCLVAHPVNPPYLIPVVEICGAPWTDPLTI
                     ERTREIMRTAGQKPVTVNQELDGFVLNRLQGALLREAFRLVEQGVVSVEDLDTTVKDG
                     LGLRWSFMGPFETIDLNAPAGLADYCQRYGPLY"
BASE COUNT          583 a          693 c          598 g          537 t
ORIGIN      
        1 tttggcagct tgggcagttt gggcagtttg ggcggtgcgt ggagtctgaa gactggtatt
       61 catgaggata tcaactcaaa ttgcgcgggc aaatgctcgc gttcgatcaa acaagaggtc
      121 gtggatagcc gctggcgttt attaactcga acaccaccac cggcagcagg tccacatgtc
      181 cacatggccg tgacctctct catcaaagcc tcaatgggct cgcgctcaag atgttcagcc
      241 gccacccgag cacgaacatc ggattgttgc ccaatagcct ttgcatcaag taagtgactt
      301 gcgtcgtcat tgaagacgct acaaatccca atcaagtctg cgcgcaattc aagctgatgc
      361 tgacgcttta agcgcttctt tagcgtatcg atagccagac gtgctcgggc ttcggcatgc
      421 gagccggcat aggaaatctc tccttcacct aaccaaccac catcaaaaaa cacgttgacc
      481 tttaacgtac tggtccgcgg gtgcccttta acccctgaca gacgcacccg atcactacca
      541 aggtcagtta cctgagcgct cgtcatgtcg gccaccacat cgggcgtgat gtagcaagcg
      601 gggtcatgca cctcataaag caactgctct ttgacgctag cggcgttgac caatccgccg
      661 gtgttatctg ccttgcctag cacacacgtg ccatccgaaa atctctctgc aatcggaaac
      721 ccaatgttat ccatgccagc gacttgctta tgaaccccat cagcaaaata cccaccagtg
      781 acttgtgcgc cacactcaat caaatgtcct gccatgctcg cacctgcgag cacatcccaa
      841 tcatcgtcag cccacccgaa atgcgccatg gctggcccaa gcgttaacga cgggtcagac
      901 accctaccgg tcaccacaat ttgcgccccc gccaagatgg catcacaaat ttcgcgtgcg
      961 ccctgatagg cattggcaca aatgaattgt ttggcatcaa acctatcgcc aaggcgctgt
     1021 ttgaccatgg cctgcccagc ttcggtcgac agatcatcgc cagtaacaac cgcaatgcgc
     1081 gggctgtcta aacccaactc ttgggccaag gtcagtatgc gtctggccgc agcttcggga
     1141 ttggctgccc caaaattact cacaatcgtg atgccattga ccaagcaatc ggccaatatc
     1201 ggtctaagct ccagatcgag caagggttca tatccaagct gcgggttggc acgcttggtg
     1261 agttgctgag cagcgagcgt gcgctcaccg agattctcaa aaatcaatgc gcttggcatg
     1321 cctcgtttga tcaaggtgtc gaccacaggc ttagccgcat ccactcggtc acccgaaaac
     1381 cccgcaccgc acccaacaaa aaatggttga ttcacttgat tgccgtcttc gaacaatgat
     1441 gatcaagcct actgcggtga acaaccgatt gcaacttggg ctcttagtag tggtgatcgc
     1501 cgcgacacca ctggttatca ccgggaaaac actgactgta gttagttgtc tgagccatta
     1561 acctgcgctt tgcgtaaact gaaccggcaa gctgggccaa tggcactacc aggtggctgt
     1621 aggttatggc taagacacac atattaggag acaagattga acatcgccat tgtcggcagt
     1681 ggtctgattg gacaagcatg ggccattgtg tttgctcgcg ccggcttgca agtcaggctt
     1741 tgggatgggg atagccaggc attggccgac gccaagacta tcatcgcgca gcagttacaa
     1801 gcactggagg cgcatcattt agttgacaac gccgcacatg ccatcacctg catacaaacg
     1861 tgcgagtctc tggctcaagc acttgagaac gctcactacg tgcaagaaaa cctgccagag
     1921 cgcttagacg ttaaatgtga catctatgcc accatggatg acatggctgc tccagacacc
     1981 attctcgcaa gttcgacctc cggtattcca gcatctgcat tcaccgagtc gttggccaat
     2041 cgccagcgat gcttagtggc tcatccggtc aacccgccct atttaatccc cgtggtggaa
     2101 atctgtggcg cgccttggac agacccctta accatcgaac gcacacgtga gatcatgcgc
     2161 accgccgggc aaaaacccgt cacagtcaac caggaactag atggctttgt tctaaacaga
     2221 cttcaaggcg cgttgctgcg cgaagccttc aggttggttg agcaaggtgt ggtcagtgtt
     2281 gaagaccttg atacgacggt taaagacggt cttgggttgc gctggtcttt tatggggccg
     2341 ttcgagacga tcgacttaaa tgcaccagca ggactcgccg actactgtca acgttatggt
     2401 ccgttgtatc a
//
LOCUS       DATBNL010000767         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48483, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000767 DATBNL010000000
VERSION     DATBNL010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48483"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VIC30_13025"
     CDS             <1..373
                     /locus_tag="VIC30_13025"
                     /inference="COORDINATES: protein motif:HMM:NF013544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY7805337.1"
                     /translation="DSFRYPQGCKLDEKANRVYLPKIGWVKYRNSRQVIGDIKNMTVS
                     RKGGHWYVSIQTEYEAQTAPHPSTSIVAIDLGVNRFATLSDGSYIEPLSALSSFKQLQ
                     EKLSFAQRRTWTPRVCQALNR"
     gene            complement(685..1716)
                     /locus_tag="VIC30_13030"
     CDS             complement(685..1716)
                     /locus_tag="VIC30_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007588917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY7805338.1"
                     /translation="MKITTVGIDLAKTVLQVHGADENGKPVLRQKFKRNQVMTYFANL
                     EPCVIGLEACGSAHHWARQLQSLGHDVRLISPQFVKPYVKTNKHDVADSEAICEAVGR
                     PTMRFVPIKSVEQQAMLSLHRAREGFVGDRTATANRIRGLMAEFGLTIPQGIGHVRCK
                     VPELIEDATNELPGMFRGLIDQLLEHLKWLDKQIDQIEGQIKTWHRNNADSQRLAEIP
                     GIGVITATALIAMIGDARNFKNGRELAAWIGLVPRQHSTGGKQTLLGISKRGDAYLRR
                     LLVHGARALAYYARKKADSNNWLYKLINRKHMNVAIVAQANKTTRIVWALLAHGREFR
                     PDYALKAAA"
BASE COUNT          391 a          477 c          458 g          490 t
ORIGIN      
        1 cgatagtttt cgctacccgc aaggttgcaa gctcgatgag aaagccaatc gggtgtacct
       61 gcccaagatt ggctgggtca agtatcgcaa cagccgacag gtgatcggtg acatcaagaa
      121 catgaccgtt agccgcaaag gagggcactg gtacgtgtcg attcaaaccg agtatgaagc
      181 acaaactgct cctcacccat caacctcaat cgtcgccatc gacttgggcg tcaatcgctt
      241 tgccaccctg tctgatggct catatattga gccactaagt gcattaagca gtttcaagca
      301 gttgcaagag aagttgtctt ttgcgcaacg gcgtacatgg acgccccggg tttgccaagc
      361 cctcaatcgt tgatggtgag aaggagaaga ttgcagccgt acattcggac tttttgtgtg
      421 tgtctattgg ccactgtccc tgatggaatc tgctggttga cgcctctatc gtttgaacgc
      481 attcgaaatg ctagccgttg gacgggcttt gtcaaccacg gtcttacctg tcttgccatc
      541 aatttcatga ttgcctgtgc aatcggtggg gtgtacctct cttgcggaaa cttcggttgt
      601 taagtaagtg gtctattgcc gtcgtctgtt attacgtcat gagcttgtcc tatctgtgcg
      661 ttgttgtttt ccgggccggc tcgactacgc ggctgctttt agcgcgtagt cgggtcggaa
      721 ttcacggccg tgggccagca gcgcccacac aatcctagtc gttttgttgg cctgcgcgac
      781 gatggcgacg ttcatgtgtt ttctgttgat cagtttgtat aaccaattgt tggaatctgc
      841 tttttttcgc gcatagtagg caagcgctcg agccccatgg actagaagtc ttctcagata
      901 ggcatcacct cgcttgctga ttcccagcaa tgtctgcttg cctccggtgg aatgttgtcg
      961 tggtaccagc ccaatccagg cagccagctc acgaccgttc ttgaagttgc gggcatcacc
     1021 gatcatggca atgagtgcgg tagcggtgat caccccaata cctggtattt ccgccaaacg
     1081 ctggctatcg gcattgttac ggtgccaagt cttaatttgt ccctcaatct ggtcgatttg
     1141 tttgtcgagc catttgaggt gttcgaggag ttgatcaatt aatcccctga acatgccagg
     1201 taattcgttg gtcgcatctt caatgagttc cggaaccttg caacgaacat gcccgatccc
     1261 ctgcgggatt gttaaaccaa actctgccat caaaccacgg atgcggttag cggtcgctgt
     1321 gcgatcacca acgaaacctt ctcgtgcgcg gtgcagtgac aacatcgctt gttgctccac
     1381 actcttgatc ggcacaaagc gcatggttgg tctgccgact gcctcacaga tggcttcaga
     1441 atcagcaaca tcatgtttgt tggtcttgac ataaggctta acaaactgag gcgaaatcaa
     1501 ccgaacatca tgccccaggc tctgtaactg acgagcccaa tggtgagcac tgccgcaagc
     1561 ctctagaccg atcacacacg gctcaaggtt cgcgaaatac gtcatcacct gattacgttt
     1621 gaatttctgt cgcaatacgg gtttgccgtt ctcatcagcg ccgtgcactt gcaacacagt
     1681 ttttgccaga tcgatgccaa ctgtcgtaat cttcatggtg gacgccctcc tgtagcgtag
     1741 tgtttgagtt aacaccctca ctttaaggca ctctgatgcc gtagcatcag gtcggggcgt
     1801 ccattccatt gtttga
//
LOCUS       DATBNL010000768         4765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_178367, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000768 DATBNL010000000
VERSION     DATBNL010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4765
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178367"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            467..1636
                     /gene="ppk2"
                     /locus_tag="VIC30_13035"
     CDS             467..1636
                     /gene="ppk2"
                     /locus_tag="VIC30_13035"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013124115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEY7805339.1"
                     /translation="MASGTPKKTTSPRTTRTRQTRADNPRTVAAGDVLAVTSARSAAR
                     KTPAEAVLAAESSKEVAVRDIIHGLLPEKTHELAEALETIMRGASPDDAQVLKRALMT
                     PMHRIGQTNKALSSDEELASNWREGAYPYRNLMARKSYEKAKYQLQVELLKLQAWVKE
                     TGQKVVILFEGRDAAGKGGAIKRFMEHLNPRGSRVVALEKPTDIEKGQWYFQRYVEHL
                     PTTGEIVLFDRSWYNRAGVEHVMGFCGDAEYDEFMRQTPEFERNLARSGIHLVKFWFS
                     VSRQEQRRRFKERRIHPLKQWKLSPIDLASLDKWDEYTAAKEAMFYHTDTAEAPWTVI
                     KSDCKKRARLNAMRYVLHKLAYSNKDVNNIGSVDPLLVGRAHVVYEHGERPMALL"
     gene            complement(1631..2356)
                     /locus_tag="VIC30_13040"
     CDS             complement(1631..2356)
                     /locus_tag="VIC30_13040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015012268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEY7805340.1"
                     /translation="MAEFVELWTYLSATPLFGLTATLLVYVLGLAIYQHYDQTPWLNP
                     VLWSIVALGGALWWLDIPYQRYFAGAQFIHFLLGPAVVSLALPLWQRRQELKRHAVAL
                     TLAALGGGAVSALSAFGIAWWLGVPESVALSLIPKSVTAPVAMGLADTIGGIAELAAI
                     FAVLSGLIGALLARTVFGLMGEGTTKLAWMRRGYALGTVSHGIGAARALQVSNQAGAY
                     AGLALAAQAVLASLWIPLLLDWL"
     gene            complement(2349..2741)
                     /locus_tag="VIC30_13045"
     CDS             complement(2349..2741)
                     /locus_tag="VIC30_13045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011799722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEY7805341.1"
                     /translation="MSALIGFTLLLLYQVLGEAIARLFALDLPGPVIGLVLLWPSLAV
                     PWVQRHVSEVAGFLLSNLSLLFIPVGVGVILHLELLSTIWWQIALALVVSTLLGLATT
                     VLLLRWLIREPDVNADAQTDVGQGRDHG"
     gene            complement(2842..3495)
                     /locus_tag="VIC30_13050"
     CDS             complement(2842..3495)
                     /locus_tag="VIC30_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019427147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HEY7805342.1"
                     /translation="MCAVYSPTVNQDWVQSTFGLALPTAVLPAAAKEVYPGYQGPIVV
                     RSQRDGRTALGLANFGLIPPWARDNKIARHTYNARLETVDSKPSYRDAWRHAHWAIVL
                     ADAFYEPCYETGRAVRWRIALANGEPMGIAGLWQRWREPKTDQVVASFTMLTINADGH
                     PLMSRLHKPDDEKRTPVVLAQASFQGWLSAGVQDARQYLSLAQMPELVGHPLETPAK"
     gene            complement(3534..4415)
                     /locus_tag="VIC30_13055"
     CDS             complement(3534..4415)
                     /locus_tag="VIC30_13055"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7805343.1"
                     /translation="MTTIAFVGLGAMGLPMAQNLVKAGHEVRGFDLNAAALTELQTTG
                     GSAAASAEQAATGAEVLMLMVVNAAQAEQVLFANGALAALNPGSTVVLMATCAQASVQ
                     ALAQQIEAAGHQLVDAPVSGGVVGAQNGTLTMMVGCESATYEKISPLLQVLGERVFHV
                     GHTPGQGAMVKTINQLLCGVHIAVAAEAFALADKAGLDLEMLLQIMSGSAASSWMLQN
                     RGPRMLEQDPEVKSAVDIFVKDLGIVLQTGHDMRAGLPIAAAAHQMYLAASGRGDGRA
                     DDSQVINTYRTLNGTKD"
BASE COUNT         1199 a         1405 c         1192 g          969 t
ORIGIN      
        1 gcgcttggcg taaaggggct gtagttctcc aacacctcgt ggcagcgcac gcagcgcgcc
       61 cattgcccag gctcgagctc gacccgatgg tagagcgcgc cacagtggtg acaattcagt
      121 tggaccggtg taaccatcaa aaaaacctaa gtcgagtaca cagtttttgc gttttagctt
      181 gcgaagtgta ttcgaatcgg tggcctgcct tatgtcattg aacaggcctt gaaggtctaa
      241 acaccagaaa cggttgcgtg agtgctgctt ttagtgctgc ttttagtgct gcgttcagtg
      301 ctacgttcag tgctgctttt actgctgaaa ccgagaaact gcgagccccc tcatgatcgt
      361 ttcatatttg atgcaagtca aatatgaaac gatcaacaat cgctgctcga gaaccactgc
      421 gcgacaatga aagcataccc acatgaccca caggagattg cgcacaatgg ccagcggcac
      481 gcctaaaaaa accacctcac caagaaccac acgcacccgc caaacacgcg cagacaatcc
      541 gcgtactgtt gccgccggcg atgttttagc ggtgactagt gcacgatcgg cggcacgcaa
      601 aacgccagct gaggccgtgt tagccgctga gagctccaaa gaggtcgctg tgcgagacat
      661 tattcatggc ctcttgcccg agaaaaccca tgaactggcc gaagcactcg agaccatcat
      721 gcgtggggca tcgcctgacg atgctcaagt gcttaagcgc gcactgatga caccgatgca
      781 tcgcattggc caaacaaaca aagcgctgtc gtccgatgaa gagctcgcga gcaattggcg
      841 tgaaggcgcc tacccttacc gcaatctcat ggcgcgcaag tcttacgaga aggcgaagta
      901 ccaactgcag gttgaattac tcaaattgca agcctgggtc aaagaaaccg gacaaaaggt
      961 cgtcattctg tttgaaggcc gagatgccgc tggcaaaggc ggtgccatca agcgcttcat
     1021 ggaacattta aatccgcgtg gctcgcgtgt ggtcgcccta gaaaagccca ccgacattga
     1081 aaaaggccaa tggtatttcc aacgctatgt tgaacatttg ccgactaccg gtgaaatcgt
     1141 gctgtttgat cgatcctggt acaaccgggc aggcgtggag catgtcatgg gattttgtgg
     1201 tgacgccgag tatgacgaat tcatgcgcca gacacccgag ttcgagcgca atctggctcg
     1261 cagcggcatt cacctggtca agttctggtt ctctgtcagt cgccaagagc agcgccgccg
     1321 ctttaaagag cgtcgcatcc atccgttaaa acaatggaag ctctcaccca ttgatctggc
     1381 atcgctcgac aagtgggatg aatacaccgc ggccaaagaa gccatgttct atcacaccga
     1441 tactgctgaa gccccgtgga cggtgattaa gtcagactgc aaaaaacgcg cacgcttaaa
     1501 cgccatgcgc tacgtattgc acaaactggc ttactccaac aaagacgtca acaacattgg
     1561 ttcagtggat cccttgcttg tcggtcgcgc ccatgtggtc tatgaacatg gtgaacgccc
     1621 aatggcgttg ctataaccaa tcaagcagca atgggatcca aagcgaggcc aacaccgctt
     1681 gcgcagccaa tgccagtccg gcataggcgc cggcttggtt gctgacctgt agcgcccggg
     1741 cagcaccaat gccatgcgag accgtaccaa gggcatagcc gcgacgcatc caggctagct
     1801 tggtggtacc ctcgcccatc aacccgaaca ccgtgcgggc caacaacgcg ccaatgagcc
     1861 cgcttaacac cgcaaatatc gcggccaatt ccgcaatgcc gccgatggtg tcagccaaac
     1921 ccatagccac cggtgcagtc acagacttcg gaatcaacga caacgccacg gactcaggta
     1981 cacctagcca ccacgctatg ccaaacgcgc taagtgcgct gactgcgccg ccgccaagtg
     2041 cggccaaggt gagcgccacg gcatggcgct ttaactcttg gcgacgctgc catagcggca
     2101 aggccaaaga caccaccgct ggccccagca aaaagtgaat gaactgtgcg cctgcaaaat
     2161 aacgctggta ggggatgtca agccaccaga gcgcaccacc caacgccacg atgctccaaa
     2221 gaacaggatt gagccacggc gtttgatcgt aatgttgata aatggccaaa cccaggacat
     2281 aaaccagtaa tgttgcggtc agaccaaata atggcgtggc cgacagatat gtccataact
     2341 cgacaaactc agccatgatc gcgcccttgc ccgacatcgg tctgagcatc cgcgtttacg
     2401 tctggttcac gaatcagcca acgcagcaac aagacggtcg tggcaagtcc taatagcgtg
     2461 gaaaccacca aagccaaagc aatctgccac caaatggttg aaagcaattc gaggtgaaga
     2521 atcaccccca ccccaactgg aataaaaagt agcgataggt ttgacagtaa aaagccagcc
     2581 acttcagata catgtcgctg cacccaaggc accgcaagcg aaggccataa cagcaccaag
     2641 ccaatgaccg ggcccggcag gtcaagcgca aacaagcggg caatggcctc acccaatacc
     2701 tgatagagca ataacaacgt aaaaccaatc aaagctgaca tgctgatacc ctcggtgcct
     2761 taaacgctag ccattcacta gccctttcac cggcagtcct ttcaccggca gtctagacga
     2821 aatcgttcct gagccctacg ctcacttggc gggtgtctca agcgggtgcc ccaccaactc
     2881 aggcatttgt gcaaggctta agtactgtct ggcatcttgc accccagcgc ttaaccaccc
     2941 ctgaaaactc gcctgcgcca gcaccacagg cgtgcgtttc tcatcatctg gtttatgtag
     3001 ccgcgacatc aacgggtggc catcggcgtt aatggtcagc atcgtgaaag acgccaccac
     3061 ctgatcggtc ttaggctcgc gccagcgttg ccacaaacct gcaatgccca tgggctcacc
     3121 attggccagt gcaatccgcc agcgcaccgc gcgtcccgtt tcatagcaag gctcataaaa
     3181 agcatcggcc aacacaatgg cccaatgggc gtggcgccag gcatctcggt agctcggttt
     3241 gctatcaacg gtttcaagcc gtgcgttata ggtgtggcgc gcaattttgt tgtcacgagc
     3301 ccaaggcggt atcagaccaa agttcgccaa accaagtgcg gtgcgaccat cgcgttgact
     3361 gcgcaccacg atcggaccct gatagccggg atagacttcc ttggctgcgg ccggcaacac
     3421 tgcggttggc aacgccagac caaaggtgga ttgcacccaa tcttggttga ccgttggtga
     3481 gtacacagca cacatcgttt gacgacaaag ctccgctgtt taaagaaagt gcatcagtct
     3541 tttgtgccat tcaaggtgcg ataggtgttg attacttgac tgtcatcggc ccgtccatca
     3601 ccgcgcccgg atgcagcaag atacatttga tgggcggccg cggcgatcgg tagtcccgcg
     3661 cgcatgtcgt ggccagtctg caaaacaatg cctaagtctt ttacaaaaat atccaccgcg
     3721 cttttaactt cagggtcctg ctcgagcatg cgtggccccc tgttttgtag catccagctt
     3781 gaggccgcag acccactcat gatttgcagc aacatctcca gatcaagccc tgccttatcg
     3841 gctagtgcaa acgcttcggc tgccaccgcg atatgaacac cgcacaacaa ctgattgatg
     3901 gttttaacca tcgcgccctg acctggtgtg tggccaacat gaaagacgcg ctcaccgagc
     3961 acctgcaaaa gcggtgagat cttctcgtaa gttgctgact cacagcccac catcatcgta
     4021 agtgtgccgt tttgtgcgcc gaccacaccc ccggagaccg gcgcatcaac caactgatgg
     4081 cccgccgctt cgatttgctg cgccaatgcc tgcaccgacg cttgggcaca cgtggccata
     4141 agcaccacgg tcgaacctgg attaagcgcg gcaagcgccc cattggcaaa gagcacctgc
     4201 tctgcctgtg cggcgttgac caccatcagc attaacacct cggcacctgt ggccgcctgc
     4261 tcggcgcttg ctgctgctga accaccggtg gtttgaagtt cggttagtgc cgcagcgttc
     4321 agatcaaaac cgcgtacctc gtgaccggct ttcaccagat tctgcgccat tggcaatccc
     4381 atggcaccaa gccccacaaa tgcaattgtc gtcacgacag tctcctgaaa ctgatcttta
     4441 ggtttgttca gtgttgcacg cattggcaac gatcaattcg cattctaggt ccaaaccacc
     4501 gcagcgcaca caaatacagc ccgcggccag atatacgagt gtcgctcggc tcgggtaacg
     4561 ctagatcggt gtaacaaatc gcaaccttga gggtttttac tcacctacat cgcttgtaca
     4621 aacgtgtgaa agcaaataaa tttgcatgat gtaactaatt gcatatattc tttgcaacta
     4681 gtttttagtt acatcccttc aacctgaatt caggagatgt tcttatgcac aagtctctaa
     4741 gcaaactgct cggctcagcc ttgac
//
LOCUS       DATBNL010000769         1696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_138863, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000769 DATBNL010000000
VERSION     DATBNL010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138863"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..855)
                     /locus_tag="VIC30_13060"
     CDS             complement(<1..855)
                     /locus_tag="VIC30_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HEY7805344.1"
                     /translation="MKSIGNSFDVAVIGAGAAGMMCAAQAAMGGKSVVLVDHASKLAE
                     KIRISGGGRCNFTNRHVTPDNFISTNPKFARGILAGYTPQDFIGLVQSYGITWHEKHR
                     GQLFCDESSEQIIAMLKRECDRHGVSWRMPCQVDGVKQVASGFELQTSAGILRTRNLV
                     IATGGTAVPQVGATDFGVRLARQFELEVVAPRAALVPLQFDPALWQPLASLAGVAIEA
                     EIAVAGGSGGPGDPKQRFVEDMLFTHRGLSGPGILQISSYWQPGQSLSINLLPQKRLV
                     DELLSLKAG"
     gene            complement(888..>1696)
                     /locus_tag="VIC30_13065"
     CDS             complement(888..>1696)
                     /locus_tag="VIC30_13065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysine decarboxylase"
                     /protein_id="HEY7805345.1"
                     /translation="WFKVWGPDELPARGIGEQSDWILKANDHWHGFGELAPDFNMLDP
                     IKATIVTPGLDMSGSFGETGIPAALVSKYLTEHGVVVEKTGLYSFFILFTIGITKGRW
                     NTLLTALQQFKDDYDRNQPMWRILPEFCRGNRRYERMGLRDLCQMIHEAYRASDVARL
                     TTEMYLSDMVPELKPSDAFAHMAHGEVERVSIDELEGRVTGVLLTPYPPGIPLLIPGE
                     RFNKTIVQYLQFAADFNARFPGFETYIHGLAQEEDAEGKKRLYVDCIRQS"
BASE COUNT          403 a          524 c          426 g          343 t
ORIGIN      
        1 accggccttt aaggacaaca actcatcgac caaccgcttt tgcggcaaga gattgattga
       61 cagcgattgc ccgggctgcc agtaactgga gatctgcaaa atccctggac cggataagcc
      121 tcggtgggta aacagcatgt cctcgacgaa gcgctgctta gggtccccgg gcccgccaga
      181 cccaccagca acagcgattt cagcctctat cgccacaccg gctaagctcg caagcggctg
      241 ccagagcgcc gggtcaaact gcagcggcac aagtgcggcg cgcggtgcaa ctacctcgag
      301 ttcaaactgc cgcgcaagtc gcaccccaaa atccgtggca ccgacttgtg gcaccgctgt
      361 gccacctgtg gcaatcacca aattcctggt gcgcaagatg ccagcactgg tttgcaactc
      421 aaacccgctg gcaacttgct tcacaccatc gacctgacaa ggcatgcgcc aagacacgcc
      481 gtgcctgtcg cactcgcgtt tgagcatggc aatgatttgc tcgctgctct catcacaaaa
      541 cagttgcccg cgatgtttct catgccaggt aatgccatag gactgcacca gcccaatgaa
      601 atcttgcggc gtgtagcccg ccagaatgcc tcgggcaaac ttcgggttcg tagagatgaa
      661 attgtccggc gtgacatgcc ggttggtgaa gttgcagcgc ccgccccccg agatccggat
      721 tttttccgcg agcttgctcg catgatctac caacacgact gacttgccgc ccatggccgc
      781 ctgagccgca cacatcatgc ctgcggcacc agcgccgatg acagccacat caaacgaatt
      841 gccaatggac ttcatggaca gcactcgtat gtcactgtgt cacggctcta cgactgcctg
      901 atgcagtcaa cataaaggcg ctttttaccc tcagcatctt cttcttgcgc caggccgtgg
      961 atatacgtct caaaccctgg gaaacgcgca ttgaagtccg cggcaaactg caagtactgc
     1021 acgatggtct tattaaaccg ctcgccagga atcaacaatg gaataccggg tggatacggt
     1081 gtgagcaaca cgccagtcac acggccttcg agctcgtcaa tcgacacccg ctcaacctca
     1141 ccatgggcca tgtgcgcaaa tgcgtctgaa ggcttgagtt caggcaccat gtctgacaga
     1201 tacatttccg tggtcaagcg cgccacatca gaggcgcggt aagcctcatg gatcatctgg
     1261 cacaaatcgc gcaaacccat gcgctcatag cggcggttac cgcgacagaa ctcgggcaga
     1321 atgcgccaca taggctggtt acggtcgtag tcatccttga actgttgcaa cgctgttaac
     1381 agcgtgttcc aacggccctt ggtgatgcca atcgtaaaca gaataaagaa tgagtacagg
     1441 ccagtttttt ctacgaccac cccgtgctcg gtcagatact ttgaaaccag tgcggcagga
     1501 ataccggttt caccaaaact gccagacatg tctagccccg gcgtgacaat cgtcgcctta
     1561 atcggatcaa gcatgttgaa gtcaggcgcg agctctccga acccatgcca gtgatcattg
     1621 gcttttagta tccagtcaga ctgttcgcca ataccgcgtg cgggcaactc atctggcccc
     1681 cagaccttaa accacc
//
LOCUS       DATBNL010000770         6720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_187429, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000770 DATBNL010000000
VERSION     DATBNL010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 6720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6720
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187429"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VIC30_13070"
     CDS             complement(<1..297)
                     /locus_tag="VIC30_13070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003818311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HEY7805346.1"
                     /translation="MTARRPAARITVSSLIELLGSMRFAISLLVIICVASVIGTVIPQ
                     NRPENTYIDMFGPFWFEVLQKFDVWSIYNSTWFIVIMAFLVTSTSICLIRNTPKM"
     gene            complement(421..1119)
                     /locus_tag="VIC30_13075"
     CDS             complement(421..1119)
                     /locus_tag="VIC30_13075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7805347.1"
                     /translation="MKQVLMRSILASSLLVGSSVFGLSHAADLPVGPIKPDVEAGAKL
                     YNEGDSARGIVACVSCHGVGGNSDLPVNPNLAAQPHEYIYKQLVEFQPREDGTAPRRG
                     MDGAPSVMTGLAMPLTIDDMRNLALFIAEQEFTKPATASNEELAARGQELWRGGDRER
                     NIPACAACHGAKGEGIPGQYPRLSGQFASYTKDQLILFRAGHRANSEMMNQIASRMSD
                     ADIEAVADYAAGLR"
     gene            1200..1823
                     /gene="yihA"
                     /locus_tag="VIC30_13080"
     CDS             1200..1823
                     /gene="yihA"
                     /locus_tag="VIC30_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008169015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEY7805348.1"
                     /translation="MTILHRASFVTSAARLDQLPDPGAPEVCFAGRSNAGKSTAINVL
                     TNQRRLAYSSKTPGRTRLINLFGLPDPLNPGEQLGYLVDLPGYGYASVAHKAKEQWAD
                     ILGGYLKDRPSLAGIVMLIDIRRGVTDLDRRLADWIAPTGKGVLALLTKADKLPYGQR
                     KNAVFAVKKQLADIGQLHALPFSATARIGIEEATLQIENWISPKVVP"
     gene            1820..2833
                     /gene="hemB"
                     /locus_tag="VIC30_13085"
     CDS             1820..2833
                     /gene="hemB"
                     /locus_tag="VIC30_13085"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008642991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY7805349.1"
                     /translation="MTTPHLILTDYPHARPRRLRRDDFTRRLVREHSLSVDDLIYPVF
                     IVDGKGIEQPVPSMPGVCRYSLDKLLPVAEDCVKLGIPVMALFPVIDPAVKALDGNEA
                     TNPLGLVPTAVRALKSHFPELGVLTDVALDPYTSHGQDGVIDEEGYVINDITLDILVK
                     QAVVQAEAGVDIVAPSDMMDGRIGAIRAALESNHHIHTRIMAYSAKFASAFYGPFRDA
                     VGSANNLGKSNKMTYQMDPGNIDEALREVGADLKEGADMVMVKPGMPYLDVLRRVKDA
                     FHVPTFAYQVSGEYAMLKAAAANGWLDHDKVMMEALLGFKRAGADGILTYFAPAAARL
                     LRD"
     gene            complement(2830..4020)
                     /locus_tag="VIC30_13090"
     CDS             complement(2830..4020)
                     /locus_tag="VIC30_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805350.1"
                     /translation="MATTNVDTALPTKRIIWLLAAAAFSSASAFRVLDPALPELSQEF
                     DISTGQAASVITWFMLSYGVLQFFYGPIGDRFGKFRTLAFATLACALGNIMVASAPSF
                     EWVLVGRALSGATAAAIVPLSMAWIGDHVPYEDRPVTLAQFMTGTILGTSAGLVIGGF
                     FTDTFGWRWSFIFLTATYLVVGVWLVRQLKTVPETQPATGFQMVGPIVSVFRSPWARI
                     VLAVVLTEGALVFGGLSFVPAYLQQTLDMSSTKAGLLTALFGAGALIYVINARSLVAR
                     FGEVKMAFAGGWILALCYLCYLLGWHWMLAAVAGLLSGFGYYLLHAVLQTNATQMSPQ
                     VRGTAVSLFACFLFLGQGLGVAAGALVVDAVGTIWVLIGAGVALPFLGMAFSYALVAK
                     RPPA"
     gene            complement(4023..5930)
                     /gene="dsbD"
                     /locus_tag="VIC30_13095"
     CDS             complement(4023..5930)
                     /gene="dsbD"
                     /locus_tag="VIC30_13095"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006392024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEY7805351.1"
                     /translation="MIAKRLILSVVAFLMLLGAAVMPAASQDFLAPEKAFSMQARMLD
                     GQTLAVRYDIAPAYSMYQERFEFDWRDAPFAAPQVTLPPGEVKYDPTFEKDMALYFGN
                     VEFAIPLPAWPSSDEPRVVTLLLVSQGCADAGLCYPPMDSAVQVTWDGAGYQIASQQP
                     IVDVDRPLAQVTSNAQTLTESSTSDAASATTGWQGLLSGGDDTGIASALSSSALWQII
                     LLFFALGALLAFTPCVLPMIPILSVLIVGQGNQVSKARGLALASAYVLGMSIIYTLLG
                     VLAGLSGAGLAAWLQTPWVLSVFALLLVLFGLAMFDVIRIEMPQSVQTKLSSTASGFK
                     GGRLWAALIMGAISALIVGPCVAAPLAGALLYISQSGDWMLGGTALFAMAWGMGLPLL
                     LVGASAGSLLPKAGAWMDGVKAFFGVLLFATAWWMLSPVLPAWIQILGWSVLAILSAV
                     LLGAFDRLPEGLRLGAAFRKALGLLLALAAVIWLVGLASGGRSLLQPLSHWASASGEQ
                     VASSGSVTKPGFEIVSSVAELDQRLAASDRPVMLDFYADWCVSCKEMELFTFSDPVVM
                     QQMSQMLLLKADVTANNANDRALLKRFNLFGPPGIMFFEAGGTQMRDIRVVGFQDAEQ
                     FSAVLDQVLAR"
     gene            complement(5927..6283)
                     /gene="cutA"
                     /locus_tag="VIC30_13100"
     CDS             complement(5927..6283)
                     /gene="cutA"
                     /locus_tag="VIC30_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEY7805352.1"
                     /translation="MEKPDRPIETAADPMCVAIMSTAPDILLAKRIAHVLVEEKLAAC
                     VQLTPPSLSIYEWNGEVHGDEEIGMLIKTSRAKARTTIERLLEMHPYDVPEAIVVPIV
                     GGHLDYLNWVCQQTQP"
     gene            complement(6429..>6720)
                     /gene="rplQ"
                     /locus_tag="VIC30_13105"
     CDS             complement(6429..>6720)
                     /gene="rplQ"
                     /locus_tag="VIC30_13105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018575499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY7805353.1"
                     /translation="TLPKAKELRRVVEPLITLGKNPTLAKKRLAFARLRDRDAVVKLF
                     DDIGPRFADRNGGYTRVLKMGHRQGDNAPMAFMELVERVEGEEQVQSQEDAS"
BASE COUNT         1721 a         1955 c         1681 g         1363 t
ORIGIN      
        1 catcttgggt gtgttgcgaa tcagacagat actcgtggag gtcacgagaa aagccatgat
       61 aacgatgaac caagtgctgt tgtagatcga ccaaacatca aacttctgta acacctcgaa
      121 ccaaaacggt ccgaacatgt caatataagt attctctggt cgattttgcg ggatcaccgt
      181 gccgatgacg cttgccacac agatgatgac aagcaaactg atagcaaacc gcatcgaacc
      241 cagcagctcg atgagcgaag atacggtaat tctggccgcc gggcgacgcg cggtcatttg
      301 actatcctga gacacgatta ctaccctcaa ttaaatagag gcttaattaa acctctagtt
      361 tgacggtgtc agcgcgaact cagttcccgc gaccgacaaa taaattgatg tcggtcaaat
      421 ttacctcaag ccagccgcat agtcagcaac tgcctcgatg tccgcatctg acatccggga
      481 agcgatctga ttcatcattt cgctatttgc ccggtgtcct gctcggaaca gtatcagctg
      541 atctttggta taggaggcaa actgccccga caagcggggg tattgaccgg gaataccctc
      601 acctttggcg ccgtgacaag cagcgcaggc tggtatgttg cgttcgcgat cgccaccacg
      661 ccagagctct tgaccacgcg cggccaattc ctcgttgctt gcggtagcgg gcttggtaaa
      721 ttcttgctca gcaataaaga gtgccagatt gcgcatatca tcaatcgtca agggcatggc
      781 caaaccagtc atcaccgaag gtgcgccatc cataccacgc cggggcgccg tgccatcctc
      841 tcggggctgg aactcaacga gctgcttgta tatatactcg tggggctgcg ccgctaaatt
      901 cgggttcact ggcaggtcac tgttgccacc cacaccgtga cagcttacac aggcaacaat
      961 cccgcgagct gaatcgcctt cattatagag tttggcacca gcctcaacgt cgggcttgat
     1021 cggtccaacg ggcaaatcgg cggcgtggga caagccaaac acagatgaac ccaccaacag
     1081 gctgctagct agtatgctgc gcattaacac ttgtttcatt taaggacctc gaatcgatct
     1141 cacctacggc aaacgcatcg attatacaat agcaaattcc cttaaatgtt tgatccatct
     1201 tgactatcct tcatagagcc tcgtttgtta cttcagcagc ccgcctagac caattgcccg
     1261 accccggtgc accagaggtt tgctttgctg ggcgcagtaa cgcaggcaaa tccaccgcca
     1321 ttaatgtgtt gacgaatcag cgtcgtttag cctattcaag taaaacaccg gggcgcacgc
     1381 gattgatcaa cctgttcggt ttgcctgacc cattgaaccc gggcgagcaa ctgggctatc
     1441 tggttgattt gccaggctat ggctacgcat cggttgccca taaagccaag gagcaatggg
     1501 ccgatattct tgggggctat cttaaagatc gcccatcgct tgcgggcatc gtcatgctga
     1561 ttgatatacg gcgtggtgtc accgatctgg atcggcgtct ggccgactgg attgcgccaa
     1621 ccggcaaagg cgtcttggct ttgttgacca aagccgacaa actgccgtac ggccagcgaa
     1681 agaacgccgt atttgcggta aaaaaacaat tggcagatat tgggcagcta catgcgttgc
     1741 cgttttctgc caccgcccgc attggcatcg aagaagccac cctgcaaatt gaaaactgga
     1801 tttccccaaa ggtagtgcca tgacaacacc acacctgata ctgactgact atccacatgc
     1861 tcgcccccgc cgtctacgtc gcgatgattt cacgcgccgc ttagtgcgcg agcattccct
     1921 atcagttgat gatttgatct acccggtctt tattgtggat ggcaaaggca tcgagcagcc
     1981 agtcccttcc atgccaggcg tatgtcgtta ctcgcttgac aagttgctac cggtggctga
     2041 agactgtgtc aagctcggca tccccgtcat ggcacttttc ccggtcattg accccgccgt
     2101 taaggcactc gatggcaatg aggcgaccaa tccgctcggg ctcgtgccaa ccgccgtccg
     2161 ggcactgaag tcgcatttcc ccgagcttgg ggttttgacg gacgtggcac ttgatcccta
     2221 cacaagccat ggccaagatg gtgtgatcga cgaagaggga tacgtcatca atgacatcac
     2281 gttagacatt ttggtcaaac aagccgtggt ccaagcagaa gctggcgtag atatcgtggc
     2341 ccctagcgac atgatggacg gccgtatcgg tgccatccgc gccgctctcg aatccaatca
     2401 tcatattcac actcgcatca tggcctattc agccaaattt gccagtgcgt tttacggacc
     2461 atttcgcgat gctgttggat cagcgaacaa cctcggcaag tccaacaaga tgacctacca
     2521 gatggatcca ggcaatatcg atgaggcgct gcgcgaagtc ggcgccgacc tcaaagaggg
     2581 cgcggacatg gtcatggtca agcctggcat gccctatctc gacgtgctgc gccgagtcaa
     2641 agacgccttt catgtgccga cctttgccta ccaggtcagt ggtgaatacg ccatgctcaa
     2701 ggccgctgca gccaatggct ggctagatca cgacaaggtc atgatggaag cgttgctcgg
     2761 ctttaaacgc gcaggcgcag acgggatttt gacgtacttc gccccagcgg ctgcccggct
     2821 attgcgagat taagccggcg gtcttttagc cactagcgcg taactgaacg ccatgcccaa
     2881 aaagggcagg gcaacgcctg caccaattaa cacccaaatg gtgccaaccg cgtcgaccac
     2941 cagtgcgcct gcggccacac cgagcccttg gcctaaaaac aaaaagcagg caaatagcga
     3001 caccgccgtg ccacgtactt gaggggacat ctgcgtcgca ttcgtttgca gtaccgcatg
     3061 tagcaggtaa taaccaaatc cactgagcaa gcccgcgacc gctgccagca tccagtgcca
     3121 acccaatagg taacaaaggt agcaaagcgc cagtatccaa cccccagcaa acgccatctt
     3181 aacttcgcca aaccgagcaa ctagtgatcg ggcattgatg acataaatca gcgcccctgc
     3241 cccaaacagc gcagtcaaca gccccgcttt ggtcgagctc atatccaatg tctgctgcaa
     3301 gtacgcaggc acaaatgaca acccaccaaa gaccaacgca ccttccgtca acacgacggc
     3361 gagcacaatg cgagcccatg gcgatcgaaa tacactaacg atcggcccta ccatctggaa
     3421 cccggttgca ggctgcgtct ccggtactgt tttcaattgc cgcaccaacc aaacacccac
     3481 taccaggtag gttgctgtca aaaaaataaa cgaccaacgc cagccgaagg tgtcggtaaa
     3541 aaatcctcca atcactagcc ccgccgaggt acccaaaatt gttcccgtca taaactgggc
     3601 cagcgtcact gggcggtctt catagggcac gtgatcacca atccaagcca tggataaggg
     3661 cacaatggct gcagccgttg ccccggacag tgcacgaccg actaacaccc actcaaaact
     3721 tggggcgctg gcaaccatta tgttcccgag tgcgcatgcc agtgtcgcaa aagcgagggt
     3781 tcggaacttg ccaaaccgat cgccaatagg gccataaaaa aactgcagca cgccatacga
     3841 caacatgaac caagtaataa cgctggcagc ctgcccggtg gagatatcga actcttgact
     3901 gagttcaggc aaggctgggt cgagcacgcg aaacgcgctg gcgctactga acgcggccgc
     3961 ggccaacaac caaatgatgc gcttagtggg caacgcagtg tctacgttgg ttgtagccac
     4021 cgctagcgcg cgagcacttg atcaagcaca gctgagaact gctctgcgtc ttgaaacccg
     4081 acgacacgaa tgtcgcgcat ctgggtgccc ccagcttcaa aaaacatgat gccgggtgga
     4141 ccgaacaagt taaatcgttt gagtaatgcg cgatcgttgg cattattggc cgttacatcg
     4201 gctttaagca gcagcatctg actcatctgc tgcatcacca ccggatcaga aaaagtaaag
     4261 agctccatct ctttgcacga cacgcaccag tctgcataaa agtccaacat caccggtcgg
     4321 tctgaggccg ctagccgttg atcaagctca gccacactcg agacgatttc aaatccaggt
     4381 ttggtcaccg aaccactgga agcgacttgc tcacccgagg cgctagccca atgcgacaac
     4441 ggttgcaaca acgaacgacc accgctagct aaacccacca accagatcac ggccgctagc
     4501 gctagcagca gccctaatgc cttacgaaac gcagcgccca agcgtaggcc ttctggcaga
     4561 cgatcaaagg caccgagcaa cacagccgat aagatagcca acacactcca gcccagaatc
     4621 tgtatccatg cgggtaagac aggggacaac atccaccaag cggtagcaaa cagcagcacc
     4681 ccaaagaacg ccttgacacc atccatccag gcacccgctt tgggtagcaa gctgcccgcc
     4741 gatgcaccga ccaatagcaa cggcaaaccc atgccccaag ccatcgcaaa taacgcggta
     4801 ccaccgagca tccagtcacc agactgagag atgtaaagca atgcaccagc gagcggggca
     4861 gctacacaag gtccaacgat caacgctgag attgcaccca tgatcaatgc tgcccatagg
     4921 cgcccgcctt tgaaacccga cgcggtgcta ctgagtttgg tttggactga ctgtggcatt
     4981 tcaatacgaa tcacgtcaaa catcgccaaa ccaaagagca caagcaataa cgcgaataca
     5041 gataaaaccc agggcgtttg tagccaggca gccaatccgg caccactgag tccggcaagt
     5101 acacccaata gggtgtagat aatcgacatg cctaagacat aggcgctagc caaagccaaa
     5161 cctctggctt tggagacttg attgccctga cccacaataa gtactgagag gatcgggatc
     5221 attggcaaga cgcagggcgt aaacgccaac agcgcgccaa gcgcaaagaa caacaaaatg
     5281 atttgccaca atgcactcga actcaatgca ctagcgatac cggtgtcgtc accaccagac
     5341 aagagtcctt gccaacccgt agttgctgac gccgcatctg acgtacttga ctcggttaaa
     5401 gtctgggcat tagatgtcac ttgagccaat ggtcgatcga catcgacgat cggttgctgg
     5461 ctagcaatct gatagccagc gccatcccat gtgacttgca ccgccgaatc catgggcgga
     5521 taacacagac cagcgtccgc gcacccttgg ctgaccaaca ataacgttac gaccctaggc
     5581 tcatcggagg acggccaagc tggcaaggga atcgcaaact ccacattgcc gaagtacagt
     5641 gccatgtctt tttcaaaggt cgggtcatac ttgacctcac cgggcggcag cgtcacctgc
     5701 ggtgcagcga acggcgcatc gcgccaatca aactcgaatc gctcctgata catggaatac
     5761 gctggcgcga tgtcatagcg aacagccaag gtttggccat ccagcatcct agcttgcatg
     5821 gagaacgctt tctcaggtgc cagaaagtct tgactcgctg caggcatcac tgcagcacct
     5881 agcagcatca gaaacgcaac gacagagaga ataaggcgtt tggcaatcat ggttgtgtct
     5941 gttggcaaac ccagttgaga tagtccagat gaccgccaac gataggcacc acaatagcct
     6001 caggcacgtc gtaggggtgc atttcgagca gccgctctat cgtcgttctt gcctttgcgc
     6061 ggctggtttt aatcaacatg ccgatctctt catcgccatg cacctcaccg ttccattcat
     6121 aaatagaaag actcggtggc gtgagctgca cacaagcggc tagtttttct tccacgagta
     6181 catgagcaat ccgcttggca agtaagatat ccggtgccgt gctcatgatc gcaacacaca
     6241 tcgggtcggc tgcggtttca atgggtctgt caggtttttc catggttcgg gttttgcaga
     6301 ttcattaatt cgattgtatc gggtgacaac cagttgcgtt gcagaaccgc agcaccagca
     6361 aaaaggccag acaaatgtct ggcctcagtt catatgcttc gagagaagca tccgacagca
     6421 agcggcgatt agctcgcgtc ttcctgtgat tgcacttgtt cttcaccctc tacgcgctct
     6481 acgagctcca tgaaagccat aggcgcgttg tcgccttgac ggtgacccat tttcaggact
     6541 cgggtgtaac cgccgttgcg atccgcgaaa cgggggccga tgtcatcgaa cagtttgaca
     6601 acagcatcgc gatcacgcaa acgggcaaat gccaagcgct tctttgcgag cgtggggttc
     6661 ttgccaaggg tgatgagggg ctcaacgaca cgacgcaact ctttggcttt tggtagcgtt
//
LOCUS       DATBNL010000771         5040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48501, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000771 DATBNL010000000
VERSION     DATBNL010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5040
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48501"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..880
                     /locus_tag="VIC30_13110"
     CDS             <1..880
                     /locus_tag="VIC30_13110"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEY7805354.1"
                     /translation="LGVVDLSQSIYQTPEASWVLTVVGGILFGFGMIRARGRGARSLV
                     LLGQGNLRSLVVLLVIGITAYMTLSGVFGSLRNDLTAATLVSTEAGTFTTEAGRWAFI
                     IGFGGLLLAFILRDRGFWRQRLEALSGVIIGLLVVAGWFITGWVGFDDFEPTPLASLT
                     FVAPVGATIQYAMIATGMTLNFGVVVVVGVVLGSLLAAKTTGTFKVQGFEKPTDMPRY
                     LVGATCMGIGGALALGCSIGQGLTGMSTLSFASMLALAGIVTGGWLALKVEGLSVGST
                     KPVERQRGGHQYEQST"
     gene            complement(812..1846)
                     /locus_tag="VIC30_13115"
     CDS             complement(812..1846)
                     /locus_tag="VIC30_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY7805355.1"
                     /translation="MHFIWPQALWGLLLVPLLVLGYLWLLRRRRRQAFAYSTLFIVRQ
                     ALSPGQGWRRHMPPVLLLIAVTVALVGAARPTAKVVLPADYMTLVLAVDTSLSMMAED
                     VPPNRLQAAQSTVKDFIDRLPGDIRVGLVTFAGTAQVAHGVTDDRRALFEAVDRFRLQ
                     RATATGSGLLMALATLMPDIALDIELLIYGFDIERFRGAPPSFGQREPVPPGSYESGA
                     IILVSDGRRTTGPNPIAAAQLAAQLGVRVYTVAFGTPEGFIPGFDGRSFYAAVDERTL
                     QSIAMITEGEFFKAENADELNSIYEQLSTQFSLEREQTEVTGLFAALSALLVLMAAAL
                     SLYWFRRTDA"
     gene            1912..2838
                     /locus_tag="VIC30_13120"
     CDS             1912..2838
                     /locus_tag="VIC30_13120"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY7805356.1"
                     /translation="MKRATLYSRSTPKNRQAATRINLDASASAQTTPTQPNPKRTLGA
                     LKPHLKSPYALLVLGVLLGAAFVWTIQRPDSNAAPPITESKVASIVMETLATKSLPSR
                     ASQVAAMVQPSIVKIRTLDGEPPPPGLISEPGKGAGFVIKDDGSILTNYHVVAGSDRI
                     VVTFANGLESPASVVSAQPERDLAVLAPARMPDDLQPVVLAPSGQMAPGDMVVAVGFP
                     FGMGPSVSAGVISGLNRTFPIPGGEPLTGLIQFDAAVNPGSSGGPLVNQSGEVLGVVT
                     ALLNPSPDGAFAGIGFAITMESAANAAGIPPF"
     gene            2856..3899
                     /locus_tag="VIC30_13125"
     CDS             2856..3899
                     /locus_tag="VIC30_13125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY7805357.1"
                     /translation="MNEPEVWKPKDTSHGDVGQSASLMEGVLYEVKKVVVGQDAFLER
                     IMIAMLAGGHLLIEGVPGLAKTLTVNTLAKVLQGSFKRIQFTPDLLPADLVGTRIYNQ
                     KTSEFSTELGPVFANLLLADEINRAPAKVQSALLEVMQERQVTIAGETHKLPRPFVVM
                     ATQNPIESEGTYPLPEAQVDRFMMKVLVGYPKPEEEFVIVQRAIGQHIEVAARASTED
                     LGKIQKHCREGFVDSALVQYAVDLVNATRTPHKVGLDSLAPYIMFGASPRASINLVEG
                     ARALAFLRGRPYTTPQDLIDIAPDVMRHRLVMSYEALAENVSADDIIAEVLKSVAAPQ
                     RPLHRHVQVAQDA"
     gene            3874..4851
                     /locus_tag="VIC30_13130"
     CDS             3874..4851
                     /locus_tag="VIC30_13130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEY7805358.1"
                     /translation="MFKWLKTRSEAAPAPQAAPESDAGSAQALLARVAWTSARRLDGL
                     LQGNYRTLFRGSGMMLADLREYGPQDDVRHIDWNVTARMQTPHVRQHEEDRELAAWFL
                     VDLSPSIDFGSMGTSKRNIAAQTIATLGHLLQQHGNRIGAIVDRGRPSVDIIPARASR
                     RHLLHVLRHVLTAQSESTEQMTSLASLLLRASRLIKQRSTVFILSDFYSTSGWEKALT
                     MLASRHDVVAVRLVDPIEQDLPDMGMLTMRDAETGEQVFVDTSDRAFRDRFALRAQDH
                     EAALLDALSRAGVDCLELSTAEAVDEGLIRFVRQRQQLMRQAPTGVGHG"
     gene            4844..>5040
                     /locus_tag="VIC30_13135"
     CDS             4844..>5040
                     /locus_tag="VIC30_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805359.1"
                     /translation="MGNWLGSFPVDALTFVWPQLLWFLLIVPMAVVVYFAIRRHERST
                     LGSVIGGVMVVLGLIGLLLAVA"
BASE COUNT         1067 a         1440 c         1442 g         1091 t
ORIGIN      
        1 tcttggcgtc gtggacttgt cgcaaagcat ctaccagact cccgaggcat cctgggttct
       61 aactgttgtg ggtgggattt tgtttggctt tggcatgatt cgagcccgcg gccgcggtgc
      121 gcgttcgctg gtattgcttg gccagggcaa cttgcgcagt ctggtggtgt tgctggttat
      181 cggcattacc gcttacatga ctttaagtgg tgtatttgga agcttgcgca atgacttaac
      241 cgcggcgacc ctagtgtcca cagaagcggg cactttcacc actgaggctg gacgctgggc
      301 gttcatcatc ggctttggcg ggctgttgct cgcgttcatt ttgcgcgacc gcggcttctg
      361 gcgacaaagg ctagaggccc tttctggcgt gatcatcggg ctactggtgg ttgcgggttg
      421 gttcatcaca ggttgggtcg ggtttgatga ctttgaaccc acaccattgg cgtcattgac
      481 cttcgttgcc ccagtcggtg ccacgattca gtacgccatg atcgccacgg gtatgacgct
      541 gaactttggc gttgtggtgg tggttggcgt agtccttggc tcgctgctag ctgctaaaac
      601 cacaggcaca ttcaaagttc aggggtttga aaaacccacc gacatgccca ggtatctagt
      661 gggtgccaca tgcatgggta tcggtggcgc cttagcactc ggttgctcaa tcggtcaggg
      721 gttaaccggg atgtcaacgt tgtcctttgc ctccatgctg gcactcgctg gcatcgtcac
      781 cggtggttgg ttagcactta aggtcgaagg tttaagcgtc ggttcgacga aaccagtaga
      841 gcgacagcgc ggcggccatc aatacgagca aagcacttaa cgcggcaaac aggccggtaa
      901 cctcggtctg ctctcgctcc agagaaaatt gcgtggatag ctgctcgtag atgctgttga
      961 gctcgtcggc gttttctgct ttaaaaaatt caccttcggt aatcatggca atgctctgta
     1021 aggtgcgttc gtcgacagcg gcgtagaacg agcggccatc aaacccaggg atgaaccctt
     1081 ccggtgttcc aaatgccacg gtatagacac gcacaccgag ttgcgcagct agctgcgcgg
     1141 cagcaatcgg gttgggcccc gtggtgcgcc gcccatcaga gaccagaata atcgcgccag
     1201 actcgtatga tccgggcggc accggctcgc gctgcccgaa agacggtggc gccccccgga
     1261 aacgctcaat atcaaagcca tagattaaga gttcgatgtc cagcgctatg tctggcatca
     1321 gcgtagccag ggccattaat aagccactgc cagtggccgt tgcgcgttgc aatcgaaacc
     1381 gatcaaccgc ctcaaataac gcccggcgat cgtcggtaac cccatgcgcg acttgggctg
     1441 tgcccgcaaa tgtcaccaaa cccacccgga tatcgcccgg caatcgatcg atgaagtctt
     1501 tgaccgtact ttgtgcggcc tgcaagcggt tgggtggcac atcttcagcc atcatgctca
     1561 gcgacgtgtc aaccgctagt accagcgtca tgtaatcagc tggcaacacc actttggcag
     1621 tcgggcgcgc cgcgcccacc aacgccaccg tcaccgcgat cagcagcaac accggcggca
     1681 tgtgacgccg ccagccttgg cctgggctta atgcttgtcg tacgataaag agggtcgagt
     1741 aggcaaatgc ctggcggcgg cgacgcctaa gcaaccacaa gtagcccagc accagcagcg
     1801 gtacgagcaa aagaccccat aaagcttgcg gccaaataaa gtgcataaac acaccagcgg
     1861 cgttaagatg attcaactgt atcatcgctc gccgcattga ggacagaacg catgaaacgc
     1921 gccacgcttt acagccgtag caccccaaaa aatcgtcagg ccgccacgcg catcaacctt
     1981 gacgcgagcg ccagcgcaca gaccacccca acgcaaccta acccgaagcg tactctggga
     2041 gcgctcaagc cgcaccttaa aagcccatac gctttactgg tattgggtgt gttgctcggt
     2101 gcggcgtttg tatggaccat ccagcggccc gacagcaacg ctgcaccgcc aatcaccgaa
     2161 agcaaggttg cttctatcgt gatggaaaca ctggccacca agtcgttgcc ttcgcgcgcc
     2221 tcgcaagtcg ccgccatggt gcagccttct atcgtcaaaa tccgcacgct cgatggcgaa
     2281 ccgcccccgc cggggctcat cagtgagcca ggcaaaggcg ctgggtttgt gatcaaagat
     2341 gacggcagta tcttgactaa ctaccatgtt gtagcgggtt ctgatcgcat tgtcgtgaca
     2401 tttgccaacg gcctggaatc gccagcttcg gtggtgtcag ctcagcccga gcgcgatctt
     2461 gcggtgcttg cgccagcgcg catgcctgac gatttgcagc ctgtggtgct tgcgcccagt
     2521 ggccagatgg caccaggcga catggtggtg gccgttggat tcccatttgg tatggggcca
     2581 tcggtgtcag ccggcgtcat ctccggctta aatcggacat ttcccatacc gggtggtgaa
     2641 cccttaacgg gactcattca gttcgatgcg gcggtcaacc caggcagctc gggtgggccg
     2701 ctggtgaatc agtccggcga agtgctaggc gtggtgaccg cgctgctaaa tccatcacct
     2761 gatggcgcat ttgccggcat cggatttgct atcaccatgg aaagtgcggc caatgccgct
     2821 ggcattccac ccttctaaat ttgtgagcaa acgacatgaa cgaacctgaa gtctggaaac
     2881 caaaagacac ctcccatggc gacgtcggtc aatcggcatc actgatggaa ggcgtactct
     2941 acgaagtcaa aaaagtggtg gtgggccagg acgcctttct ggaacgcatc atgattgcca
     3001 tgctcgcagg cggccacctc ttaattgaag gtgtgccggg attggctaaa accttgacgg
     3061 tcaataccct agccaaagtc ttgcaaggct cgtttaagcg tattcagttc acccctgacc
     3121 tgttgcctgc tgacttggtc ggcacacgca tctataacca aaaaaccagc gaattcagca
     3181 cagagttggg accggttttt gcgaacttgt tgttagccga tgaaatcaac cgggcgccag
     3241 ccaaagtaca aagtgcgctg cttgaagtca tgcaagagcg tcaggtcacg atcgcgggtg
     3301 aaacacataa gctaccccga ccatttgtgg tcatggccac acaaaacccc atcgaaagcg
     3361 aaggcaccta tccattgcca gaggcacaag tcgatcgctt catgatgaag gtgttagtcg
     3421 gctacccaaa accagaagaa gagtttgtga tcgttcaacg tgccatcggc cagcacatcg
     3481 aggtggccgc acgcgcgagc accgaagatc ttggcaagat ccagaaacat tgccgggaag
     3541 gttttgtgga ttcagcgctt gtgcaatacg ccgtggactt ggtcaacgcc acgcgcacgc
     3601 ctcacaaagt gggtttggac agcctagcac cctatattat gtttggcgcc agcccgcgcg
     3661 cgagcatcaa tctagtcgaa ggtgcccgcg cattggcgtt tttacgcggc cgtccctaca
     3721 ccacgccaca ggatttaatc gatatcgccc ccgatgtcat gcgccatcgt ctggtgatgt
     3781 cttacgaagc gctcgctgag aatgtctcgg cagacgacat catcgccgag gtactcaaat
     3841 cggtggccgc accccaacgt ccattgcatc gccatgttca agtggctcaa gacgcgtagc
     3901 gaggccgcgc cagcgccgca agctgccccc gagtcggatg cgggcagtgc acaggcgttg
     3961 ctcgcgcgcg tggcttggac cagcgcgcgg cgcttagacg gcttgctgca aggcaattac
     4021 cgcacgctgt ttcgtggctc gggcatgatg ctggctgacc tgcgtgaata cgggccacaa
     4081 gatgacgtca ggcacattga ctggaatgtc acggcgcgca tgcaaacacc gcatgtgcgt
     4141 caacacgaag aagaccggga gctcgcagcc tggtttctgg ttgacctttc cccatcgatt
     4201 gattttgggt cgatgggcac cagcaaacga aacattgccg ctcaaacgat tgccacgctc
     4261 ggccacttgt tgcagcagca cggcaatcgc attggcgcca ttgtcgatcg aggtcgcccg
     4321 agtgtcgaca tcatcccggc gcgcgctagt cgcaggcacc tgctacacgt gctgcgccac
     4381 gtgctgaccg cgcaaagtga gtcaactgag caaatgacca gcctagccag tttgttgctg
     4441 cgcgcctcgc gtctgatcaa acaacgcagc acggtcttta tcctgtcgga tttttattcc
     4501 acctcgggtt gggaaaaggc cttgaccatg ctcgcgagcc gccatgatgt ggtggcggtg
     4561 cgactcgttg accctatcga gcaggacctg cctgacatgg gcatgctcac catgcgcgat
     4621 gcagaaactg gcgagcaggt atttgttgac accagtgacc gcgcgtttcg ggatcgcttt
     4681 gcgctgcgcg ctcaggatca tgaagcggca ttgttagacg ccttaagtcg tgccggcgtt
     4741 gactgcttgg agctctcaac ggccgaagca gtagatgagg gtctgattcg atttgtgcgt
     4801 caacgccaac aactgatgcg tcaggcgcca accggtgttg gccatgggta attggttggg
     4861 ttcatttcca gtcgatgccc tcacgtttgt gtggccccaa ctgctatggt ttttattgat
     4921 cgtgcccatg gctgtggtgg tttactttgc gatccgccgc cacgagcgct caacactcgg
     4981 aagcgtgatt ggtggtgtca tggtggtgct aggactcatc ggtctgctgt tagccgtcgc
//
LOCUS       DATBNL010000772         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_8948, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000772 DATBNL010000000
VERSION     DATBNL010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8948"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VIC30_13140"
     CDS             <1..186
                     /locus_tag="VIC30_13140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805360.1"
                     /translation="CTAFFSKLSLTVSFALSGIEAVRRIQCGDGCSRVDILSAEPISP
                     QEQTVSRHSETPRRVLE"
     gene            590..>2432
                     /gene="selD"
                     /locus_tag="VIC30_13145"
     CDS             590..>2432
                     /gene="selD"
                     /locus_tag="VIC30_13145"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011463912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEY7805361.1"
                     /translation="MKQSGQPILRDIVLVGGGHSHVGVLRRFAMKLMPGVRLTVVCRD
                     THTPYSGMLPGYVAGHYGYDDVHIDLRRLAEFAGARFFRTEAVGLDRHAHKLYCSDRP
                     AIPYDRLSINIGSTPKLNDAGDQSSRAVAVKPIYQFNERWLALLARVQSQPGPMHIVV
                     VGGGAGGVELLLAMQHRLRQELHHLGQDPNALRFSLFTRGASILPTHNTAVQQRFTRT
                     IKDRGVALHLNAAVQTVDDQGLTTVNGEHYTADEVIWVTRAGGARWLEDTGLALDDDG
                     FIKVTDTLQTVTDPDIFAAGDIASMVNHPREKAGVFAVRQGPPLARNLRRSLEGLPLR
                     DYHPQRRWLALISTGDQYAVASRGALSAAGAWLWRWKDHIDRRFMARFSDLPEMSQAT
                     SKLPASTVALEGEEAQQAISAIAMRCGGCGAKVGASTLSRALSALQPIERDDVVIGLH
                     APDDAAVVRVPAGKAMVHTVDFFRAFIDDPYVFGQIAANHALGDIFAMGAEAQTATAI
                     ATVPQGLEAKVEDTVFQMMSGALEVLNDANCALVGGHTGEGQELALGFAVNGLIDDRM
                     DKIMRKGGMRPGDVLILTKPIGTGTLFAAHAQLQAKGRWIDEALISMR"
BASE COUNT          517 a          624 c          696 g          595 t
ORIGIN      
        1 tgtactgcat ttttttcaaa gctttcattg accgtttcct ttgctctctc tggtatcgaa
       61 gcagttcgtc gaattcaatg cggcgatggt tgttcacgag ttgacatttt aagcgctgag
      121 cctatatctc ctcaagaaca aacggtatcg agacattcag aaacgccgcg gcgtgtgctt
      181 gagtagctgg atcgtgaacg tggccattca tgaacgtctc cgtgaatgtt tcaagtgcaa
      241 acgttagttg ttaaagcccg cggtcgaagt gcacttcaaa ttgagataaa tgaaaccatg
      301 gtgtgcaagc gttattactg caagactcct taacgaaatg atgaccgcag ccagtttttt
      361 ttgggcgtac cgcggttccg tgcactgcag tttttgcgtg cagctcgcca ttccaataca
      421 caacgtgtgg tggtggggtt tttaggttgc cttcgtggtt acactgcccc ttttgttgga
      481 aggcggtcgc gagtgcaaca gatattcaag catgcaccgt ccctattgca cctcagtcat
      541 tgcacttcaa tcactacact tcaaccatcg agcggcttaa aggaaggtta tgaaacaaag
      601 tggtcagccg atattgcgcg acatcgtgct cgttggtggg ggacatagcc atgtgggtgt
      661 gcttcgacgt tttgccatga agctcatgcc cggtgtgcgg ctgaccgtgg tctgccgcga
      721 tacgcacaca ccatactcgg gcatgctgcc aggctacgta gctgggcatt atggctacga
      781 tgatgttcac attgatttac gacgattagc cgaatttgct ggtgctcggt ttttcaggac
      841 tgaagcagtg gggctagatc gtcatgctca taaactttac tgcagcgatc gaccggccat
      901 cccgtatgac cggttatcga tcaacattgg ctcgaccccc aagcttaatg atgccggcga
      961 ccaaagcagt cgagccgtcg ctgtcaaacc aatctatcag ttcaatgagc gttggttggc
     1021 cctgttggcg cgcgtgcaga gtcagcccgg ccccatgcac atcgtcgtgg tgggcggcgg
     1081 tgcgggcggt gtcgagttac tgctagccat gcaacaccgt ctgcgccaag agctgcatca
     1141 cctgggccaa gaccccaacg cgttgaggtt tagtttgttc acccgcggtg ccagcatttt
     1201 gcccacgcac aacacggcgg tgcagcaacg attcacgcgc acgatcaaag accgtggcgt
     1261 ggcattgcat ctgaatgccg cggttcagac cgtagacgat caaggtctga ctacggtcaa
     1321 tggcgaacat tacacggcag acgaagtaat ttgggtaacg cgagccggtg gcgcgcgttg
     1381 gttagaagac accggtcttg cgcttgatga cgatggtttc atcaaggtca ctgacacact
     1441 gcaaacagtc actgaccccg atatttttgc tgctggtgat attgctagca tggtcaatca
     1501 tccgcgcgag aaggctggtg tatttgctgt gcgtcaaggg ccaccattgg cgcgtaactt
     1561 gcgccgctcg cttgaaggcc tgccgcttcg cgactaccac ccccaacgtc gttggttggc
     1621 tctgatcagc acaggtgacc aatatgcagt ggcttcgcgt ggcgccttat cggccgctgg
     1681 cgcgtggctc tggcgttgga aagaccacat tgatcgccgc tttatggcgc gattcagtga
     1741 tttacctgag atgtcgcagg cgacaagcaa attgcctgcc tctactgtgg ccttagaagg
     1801 tgaagaagcc caacaggcca tttcagccat cgccatgcgc tgtggcggct gtggtgccaa
     1861 agtaggggct tcaacactat cgcgtgcgct tagcgcatta cagccgattg agcgtgatga
     1921 tgtggtgatt ggtttgcacg cacctgatga tgccgcggtg gtgagggtgc ccgctggcaa
     1981 agccatggtg cacacggtag attttttccg ggcgtttatc gatgatccat acgtgtttgg
     2041 acaaattgcc gccaatcatg cgctaggcga catctttgcc atgggcgctg aggcgcaaac
     2101 cgccacggcc attgccaccg tccctcaggg gcttgaggcc aaggtagaag acacggtgtt
     2161 tcagatgatg tcgggtgcct tagaggtttt gaatgatgcc aactgcgcgc tggttggcgg
     2221 acacacaggc gaagggcaag agcttgcttt ggggttcgcg gtcaatggct taattgacga
     2281 tcgcatggac aagatcatgc gcaaaggtgg catgcgcccc ggtgatgtct tgatcctgac
     2341 caaaccgatt ggcacgggca ctttgtttgc agcccacgcg caattgcaag ccaagggtcg
     2401 atggatcgac gaagcgttga tatcgatgcg tc
//
LOCUS       DATBNL010000773         2736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_159105, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000773 DATBNL010000000
VERSION     DATBNL010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159105"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VIC30_13150"
     CDS             <1..294
                     /locus_tag="VIC30_13150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805362.1"
                     /translation="FEQEKGGQKLDYTVVLVQEDDQKPAYEGRIEVTFEGRYPNGRAG
                     AVKALVVPFTLEQYEILNGSIEMPNSLQASRATLRVYRADGNRALSYRTFSVD"
     gene            complement(371..1162)
                     /locus_tag="VIC30_13155"
     CDS             complement(371..1162)
                     /locus_tag="VIC30_13155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012406543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY7805363.1"
                     /translation="MSQNLQAPTLQAPSFRLDGKRALITGGSRGIGLAAAFALGQAGA
                     QVVLAARDEVGLAQARTTLCEHGLMSSSVEIVVLDVTDASAVEQAVTALGPCQVLVNN
                     AGGNRGGLLKDKTAQDIEAVLRLNVTSSMVVSQAVIAGLVAADQSGSIINLSSQYGHI
                     GSPERTLYSAAKHAVEGYTKSLAWEVGSLGIRVNTVAPSMIETDMTRERLNQPGVREA
                     FAQKSALGRIGQPQDLAGAIVFLASDASAYITGSCIHVDGGTTAV"
     gene            complement(1159..1890)
                     /locus_tag="VIC30_13160"
     CDS             complement(1159..1890)
                     /locus_tag="VIC30_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006161379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY7805364.1"
                     /translation="MTPSTLDIDMSLPANVQAALETVSTATLTTVLLKKGLRNVWLRG
                     TRPLRTGQHRVVGRAFTLRFVPAREDLATPASWSSPISTRAAIEAMPAGCVAVVDAMG
                     VTDAGIFGDILCARMAKRGVAALVSDGVVRDISGVWATGLPVWCQGAAAPASVTSLTF
                     VAWQQPIGCGGVAVMPGDVIVVDDDGAVLIPTDLLDDVVAQALEQEKLEGWIMKRIEA
                     GETLPGLYPPNEENLARYREDHQTP"
     gene            complement(1934..>2736)
                     /locus_tag="VIC30_13165"
     CDS             complement(1934..>2736)
                     /locus_tag="VIC30_13165"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019142790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY7805365.1"
                     /translation="TLLGVLGEAPKLTAIEATEYVKRVLARVNGAVPVVVGASAAGFA
                     AMGELTKRVMDMGANGVMVAPAAGLRTDDQIRAYFAMVNETLGADVPWVLQDHPNATG
                     VQMSGALVMQIIDQSPQCVMLKHEDSPGLNKLSAIRAAQAQQTLKPASILSGNGGGLF
                     LPEELERGADGAMTGFAYPEMMVQVCKAHAAGDVDRAFDVFDAYLPLSRYEQQAGIGL
                     AVRKYLLAKRGAIASDTLRKPGPVLSKQDVVDIERLIKRQEKRLAELA"
BASE COUNT          611 a          844 c          716 g          565 t
ORIGIN      
        1 tttgagcagg aaaagggtgg acaaaagctg gattacaccg tggtgttggt ccaagaagac
       61 gaccagaaac cggcctatga ggggcgcatt gaggtgacct ttgagggtcg ctatcccaac
      121 ggccgtgctg gcgctgtaaa agcactggtg gtgccattta cgcttgaaca atatgagatc
      181 ttgaacggtt caatcgaaat gcccaattcg ctgcaggcaa gccgcgccac actgcgtgtt
      241 tatagggccg acggtaaccg cgcgctgagt tatcgcacct tcagtgttga ttgactgcgg
      301 ttgattgatg gccgttgatt gacagttcac gattgcaagc gcgcggtgat ccatcaaacc
      361 gcgcggtcac ctaaactgcg gtcgtgccac cgtcgacatg aatacaactg ccagttatgt
      421 aggctgaggc gtcgctggcc agaaacacga tcgcccccgc aaggtcttgt ggttgcccaa
      481 tgcggccaag tgcggatttc tgagcaaagg cctctcgcac accaggttga ttaaggcgct
      541 cgcgggtcat atccgtttcg atcattgagg gcgccacggt attaacacga atacccaacg
      601 atcccacttc ccaagccagt gacttggtat agccctcaac ggcatgtttg gcagcactgt
      661 acaaggtgcg ctctggtgaa ccaatgtggc catattgaga agacagattg ataatgctgc
      721 ccgactgatc tgccgccacc agtcctgcta ttactgcctg agacacgacc atgctcgacg
      781 tgacgttcag ccgcaacacc gcctcaatat cctgtgcggt cttgtctttg agcagacctc
      841 cacggttacc accagcattg ttaacgagca cctgacacgg gccaagcgct gtcactgcct
      901 gctcaaccgc actggcatcg gtaacatcaa gcacgacgat ctcgactgat gatgacatca
      961 acccgtgctc gcacaacgtc gttctagctt gcgctaaccc gacctcatca cgtgcggcca
     1021 acaccacttg agcaccggcc tgccccaggg caaaagccgc tgccagaccg atgcctcgac
     1081 tgccgccggt aataagggca cgcttgccgt ctagcctgaa actcggtgct tgtaaggtcg
     1141 gtgcttgcag gttttgactc atggtgtctg gtgatcctcg cggtaacggg ctaaattctc
     1201 ttcattgggc ggatacaggc ccggcaaagt ctccccggcc tcgatacgct tcatgatcca
     1261 gccttcgagt ttttcttgtt cgagcgcttg cgccaccaca tcatcaagca aatcagtagg
     1321 tatcaataca gcaccatcat catcgaccac gatgacatct ccaggcatca ccgccacccc
     1381 gccgcagcca atcggttgct gccaagctac aaaggttagg ctcgtcaccg atgcgggtgc
     1441 cgctgccccc tgacaccaaa ccggcaggcc cgtggcccaa acgccactga tatcgcgcac
     1501 caccccgtca gagaccagtg ccgccacacc gcgtttggcc atgcgtgcgc acaagatatc
     1561 cccaaaaatt cctgcatcgg tcacgcccat ggcatcgacc acggccacac agccagctgg
     1621 cattgcttca atcgcggccc gcgttgaaat gggcgaagac caagacgccg gtgtggctaa
     1681 atcctctcta gcgggcacga agcgcaacgt aaacgctctg cccacaacgc gatgctggcc
     1741 cgtgcgcaag ggccgggtgc ctcgcaacca gacgttgcgt agacccttct ttaacaacac
     1801 cgtcgtcaaa gtagcggtag atacggtttc taaggctgct tgcacatttg ccggcaagct
     1861 catgtcaata tccagtgtgc taggcgtcat acgttgtcct ttgtttaggg ccgaattaag
     1921 acctaattaa aacctaagca agttcagcca ggcgtttttc ttggcgttta atcaagcgct
     1981 caatatcgac cacgtcctgt ttagacagca ccgggccggg cttacgcagc gtatccgatg
     2041 caatggcacc gcgcttggcg agcaaatact tgcgcaccgc caatccgatg cccgcttgct
     2101 gttcatagcg cgacagcggc aggtaggcat caaacacatc aaatgcgcga tccacatcac
     2161 cggccgcgtg cgccttacaa acttgaacca tcatctcggg ataagcaaat ccagtcatgg
     2221 cgccatcggc gccgcgctca agctcctcgg gtaaaaacaa tccgccgcca ttccccgaga
     2281 gaatcgacgc cggttttaat gtctgctgag cttgggcagc ccgaatcgcc gagagcttat
     2341 taagccctgg actgtcctcg tgcttgagca tgacgcactg cggcgattgg tcaatgatct
     2401 gcatgactag cgcgcccgac atctgcacgc ctgtggcgtt gggatggtct tgcaacaccc
     2461 atggcacgtc ggcacccaat gtttcgttga ccatggcaaa gtaagcgcga atctggtcgt
     2521 cggtgcgcag cccggccgcc ggcgccacca tgacgccatt agcacccatg tccatgacgc
     2581 gcttggtgag ttcacccatg gcagcaaatc cagcggccga ggcaccaact accacgggca
     2641 ctgcgccgtt gacacgcgcc aacactcgct tgacgtactc ggttgcctcg atcgcggtca
     2701 gtttcggggc ttcgccgagc acaccgagta gcgtca
//
LOCUS       DATBNL010000774         1815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_187500, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000774 DATBNL010000000
VERSION     DATBNL010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187500"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VIC30_13170"
     CDS             complement(<1..199)
                     /locus_tag="VIC30_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019249085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEY7805366.1"
                     /translation="MLRVTSINVNGLRAAFRKGLSQWLESERPDVVCLQEVKAQQADL
                     APELLAPPGFAGHFHYAEKKGY"
     gene            263..952
                     /gene="pyrE"
                     /locus_tag="VIC30_13175"
     CDS             263..952
                     /gene="pyrE"
                     /locus_tag="VIC30_13175"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006389849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEY7805367.1"
                     /translation="MTTSASPQTRTNRESFVDFALQEGVLRFGEFMTKSGRLSPYFFN
                     AGLFNHGASVARLGQFYAQALIDADVSFDMLFGPAYKGISLATSAAMALSAHASMAGR
                     SVPFAFNRKEAKDHGEGGVIVGAPLSGKVVIIDDVVTAGLSVDESVSMIRAAGAEPAA
                     VLIALDRMERAGVEPDLSASSAVQEVSLRHGIPVIAIANLQDILSVIRERPEFATHEP
                     AVVAYRDRYGI"
     gene            complement(976..>1815)
                     /gene="gatB"
                     /locus_tag="VIC30_13180"
     CDS             complement(976..>1815)
                     /gene="gatB"
                     /locus_tag="VIC30_13180"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801953.1"
                     /note="allows the formation of correctly charged
                     Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
                     of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
                     which lack either or both of asparaginyl-tRNA or
                     glutaminyl-tRNA synthetases; reaction takes place in the
                     presence of glutamine and ATP through an activated
                     phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HEY7805368.1"
                     /translation="PEGQTEFGTRTETKNVNSFRFLERAILFEVQRQIELIEDGGTVV
                     QETRLYDADRDETRSMRSKEDAHDYRYFPDPDLPPLVIDAAWIEEVRADMPELPGQMR
                     DRFVTEMGLTPTDAAQLCQDPALAQYFEAVAKQLPTEQGKLAANWLMGEMSAALNRDD
                     IGLDDAPIKPDHLAKLLTRIIDGTVSNKIARDVFAHMWSTDDKDADAVIEAKGLKQIS
                     DSGAIGAMVDEVIANHDSIVQEYRAGKQKAFNSLVGQVMKLAKGKANPAQVNELLKSR
                     LDG"
BASE COUNT          362 a          469 c          502 g          482 t
ORIGIN      
        1 tgtagccttt tttctcggca tagtgaaagt gacctgcaaa gcctggtggc gctaagagct
       61 cgggtgccag atcggcctgt tgggccttga cttcttgcaa acagaccaca tcgggtcgtt
      121 ccgattcgag ccactgactc aaacctttgc gaaacgcggc acgtaaaccg ttgacgttta
      181 ttgacgttac acgtaacaac tcagtctcca atgcgataat ttcactgttt taaccttctg
      241 tttggacgcc aaggactttg tcatgaccac atcagcatca ccacaaacgc gcaccaatcg
      301 cgaatcgttt gttgatttcg ccttgcaaga gggtgtcttg cggtttggcg agttcatgac
      361 caagtcaggt cgactgagtc cgtatttttt taacgcgggg ctctttaacc atggcgcgag
      421 cgtcgcccgc ttgggtcaat tttacgcaca agcgctaatc gatgccgatg tgtcgttcga
      481 catgttgttt ggacccgcct acaaagggat ttcattggcc acgtcggcag ccatggcttt
      541 gtcagctcac gcgtctatgg ccgggcgatc agtgcccttt gcctttaatc gcaaggaagc
      601 caaagatcat ggtgagggcg gtgtgatcgt gggtgccccc ttgtctggca aagtggtcat
      661 catcgatgat gtggtgacag ccggactttc ggttgatgag tcggtgagta tgatccgagc
      721 agccggcgct gaaccagccg cggtattgat tgcccttgac cgcatggagc gcgcaggcgt
      781 tgagccggat ttgtccgcaa gctcggcggt tcaggaagtg tcgttgcgtc acggcattcc
      841 cgtgattgcc attgcaaatt tacaagacat cttgtctgtg attcgcgaac gacccgaatt
      901 cgccacgcac gagccggctg tggtggctta tcgggatcgg tacggtattt aagctacgtt
      961 atttaacggt gcccgttagc catcgagtcg cgatttcagg agctcattga cctgagccgg
     1021 gttggctttg cctttggcaa gtttcatgac ttggcccaca agcgaattaa acgctttctg
     1081 tttgcctgcc cggtattctt gaacaatgct gtcatggttg gcgatgactt catcgaccat
     1141 ggcaccaatg gcgccgctgt cactgatttg ctttaggcct ttagcctcga tcacggcatc
     1201 ggcgtctttg tcgtctgtgc tccacatgtg ggcaaacaca tcgcgtgcaa tcttgttcga
     1261 aaccgtacca tcgatgatgc gtgtcagcag tttggccaag tgatctggct tgattggtgc
     1321 gtcatcgagt ccgatgtcat cgcggtttag cgctgcggac atttcaccca tgagccagtt
     1381 ggcggctagc ttgccttgct cggtaggtaa ctgtttggcc acggcctcaa aatattgcgc
     1441 caaggccgga tcctgacaaa gctgggcggc atcggttggc gtcaaaccca tctcggtgac
     1501 aaatcgatca cgcatttgac cgggtaattc gggcatgtca gcccggacct cttcaatcca
     1561 ggctgcatcg atcaccaagg gaggtaagtc ggggtcgggg aagtagcgat agtcatgggc
     1621 atcttctttg ctgcgcatgc tacgtgtttc gtcacggtca gcgtcataaa gacgagtttc
     1681 ttgcaccacc gtgccgccgt cctcaattaa ttcgatttgt cgttgcacct caaacaagat
     1741 ggcgcgctcg aggaaccgga atgaattgac gttttttgtt tctgtgcggg tgccaaattc
     1801 ggtctggcct tcagg
//
LOCUS       DATBNL010000775         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_59386, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000775 DATBNL010000000
VERSION     DATBNL010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59386"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..461)
                     /locus_tag="VIC30_13185"
     CDS             complement(<1..461)
                     /locus_tag="VIC30_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003799140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEY7805369.1"
                     /translation="MSQTHTPNLTLEPVTRAAGTIKLPGSKSISNRVLLLAALCSGTT
                     NIEGLLASDDTRVMLQALSSLGIGVGHRKDGVLTVTSPGRFRIRQANLFLGNAGTAFR
                     PLTAALAFAGGDYELSGVARMHERPIGDLVDALRSLGADIDYLGEPGYPPL"
     gene            complement(458..1378)
                     /locus_tag="VIC30_13190"
     CDS             complement(458..1378)
                     /locus_tag="VIC30_13190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HEY7805370.1"
                     /translation="MSPSDESSPEQRSRFHVETLAVVGVGLIGGSFALALKQAGCVGR
                     VLGVGRQQQTLEQAQSLGVIDEIATLEQAARESDLLMLAAPVGAFDALFHALSPHLSD
                     KVLITDGGSTKGNVVAAARAALGDRIGQFVPAHPIAGSHESGPQAAFADLYRNRHVVV
                     CPLPENSSSAVTTVSDAWQACGASLVTMTVEQHDDVLAAISHLPHWLASLYVEHVARD
                     ANATLNLQLAGAGFGDFSRIAQGSVEMWRDIFMANRQSMLRQLDSLHDMLGQARDALE
                     KNDLQWLESVLANAAQVRRDWGRQQDENKS"
     gene            complement(1384..>2100)
                     /locus_tag="VIC30_13195"
     CDS             complement(1384..>2100)
                     /locus_tag="VIC30_13195"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEY7805371.1"
                     /translation="KDFGHDLDAMFDAIEPNTRVVFIANPNNPTGTFLSADVVTGFLE
                     RVQATYGNRVTVVLDEAYNEYLPADIRIDSVALVKRFANLVVSRSFSKAYGLAGLRVG
                     FGVAQPALTDLMARVRQPFNVNSLAQAAAMAAFEDDEFLARSAQVNADGKQQLEKAFD
                     ALGLTYIPSFANFVLVEVGDAQAVNQALLKRGVIVRPVGADGLPNWLRISIGLPQENA
                     TLIRALTEVFGQAGPGQTAD"
BASE COUNT          497 a          644 c          549 g          410 t
ORIGIN      
        1 tgcagcggcg gatagccggg ctcgccgagg tagtcgatat cagcacctag actacgcaac
       61 gcatcaacca ggtcaccaat cgggcgttcg tgcatgcgcg ccaccccgga caactcatag
      121 tcgccccccg cgaaggcaag cgcagccgtc aagggccgaa acgccgtacc ggcgttacca
      181 agaaacaggt tcgcctgtcg aatgcgaaac cgtccaggac tggtcaccgt caatacgcca
      241 tctttgcgat gccccacgcc gatgcccaag cttgaaaggg cctgcagcat gacgcgggtg
      301 tcatcagacg ccagcaaacc ttcaatgttg gtggtgcccg agcacagagc tgccagcagc
      361 agcactcgat tggaaatact tttagagccc ggcaacttga tcgtaccggc tgcgcgcgtc
      421 acaggctcaa gcgtgaggtt tggtgtatgc gtttgactca tgacttgttc tcatcttgtt
      481 gcctgcccca gtcacgtcga acctgtgcgg cattggccag cacggactca agccactgca
      541 agtcgttttt ttctagggca tcacgcgcct gtccaagcat gtcatgcagg ctgtcgagct
      601 ggcgcaacat actctggcgg ttggccataa aaatatcgcg ccacatttca accgagcctt
      661 gcgcaatgcg cgagaagtca ccaaacccag cacccgcaag ctgcagattc aaggtggcgt
      721 tagcgtcgcg tgcaacatgc tcaacataca agctcgccaa ccaatgcggt aagtgactga
      781 tcgctgccag cacgtcatcg tgttgctcga ctgtcatggt cacaagactg gcaccgcatg
      841 cttgccaggc atcgctgact gttgtcacag ccgaggacga gttttctggt agagggcaaa
      901 ccaccacatg acggtttcgg tataaatctg caaaggccgc ttgcggacct gattcgtgcg
      961 agcccgcaat cggatgggcc ggcacaaact gcccgattcg gtcaccgagt gcagcacgcg
     1021 ctgccgcgac aacattccct ttggtactac caccatcggt aatcagcacc ttgtctgaca
     1081 ggtgcggact caatgcatga aacaacgcat caaacgcgcc aactggggcc gcaagcatca
     1141 gaagatctga ctcgcgagcg gcttgttcta aagtggctat ttcatcgatg acgccaagcg
     1201 actgggcttg ctctagggtc tgttgctgac gtcccacacc gagcacacga ccaacacacc
     1261 cggcttgctt aagcgccaat gcgaacgaac caccgataag acccacaccc acgaccgcga
     1321 gcgtttcaac atgaaagcgc gatctctgtt cagggctcga ttcgtcggac gggctcatcg
     1381 caatcaatcc gcggtctgac caggcccagc ctgtccaaac acttcagtca acgctcggat
     1441 cagcgtggcg ttctcttggg gcaacccaat ggaaatacgc agccaatttg gcaagccatc
     1501 agcaccgact ggacgcacaa tcacgccgcg ttttaagagc gcctgattga ccgcttgcgc
     1561 atcaccgact tcaactaaca cgaagttcgc aaagctcggg atataggtca aacccaacgc
     1621 atcgaaggct ttttccaact gctgcttgcc atcggcgttg acctgggcgc tgcgtgcaag
     1681 aaactcatcg tcttcaaacg ccgccatggc agcggcttgt gccaatgaat tcacgttaaa
     1741 gggctggcgc acacgtgcca tcaagtcggt caaggctggt tgcgccacgc caaacccgac
     1801 gcgaaggcct gccaacccat aggcttttga gaagctgcgt gacacaacga ggttcgcaaa
     1861 gcgtttgacc aaggccacgc tgtcaatgcg aatatccgca ggcaagtact cgttataggc
     1921 ctcatcaagc accactgtca cacgattgcc gtacgtcgcc tgcacacgtt ccaagaaacc
     1981 tgtcacaaca tcagccgaca gaaacgtccc ggtcggattg ttggggttgg cgataaacac
     2041 cacgcgggtg ttcggttcaa tggcgtcaaa catcgcgtca agatcgtgcc cgaagtcttt
//
LOCUS       DATBNL010000776         2548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_19057, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000776 DATBNL010000000
VERSION     DATBNL010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19057"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VIC30_13200"
     CDS             <1..741
                     /locus_tag="VIC30_13200"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY7805372.1"
                     /translation="ERKGDHYVVSGTKVWISTAQVADKMLLLARTTPLEDCKSHTEGL
                     SLFYTDVNREFVQAREIPKMGRKAVDSNELFIDHLPVPVEDLIGEEGKGFSYIMHGMN
                     VERILIAAEAVGLGRAALKRATHYANEREVFNRPIGMNQAIQHPLAANWMELEAANLM
                     VYQAATLFDQGKPCGAQANAAKYLAGEAGFNACQQAVMTHGGFGYAKEYHVERYLREV
                     LIARIAPVSPQLVLCYIAERVLGLPKSY"
     gene            complement(762..1967)
                     /locus_tag="VIC30_13205"
     CDS             complement(762..1967)
                     /locus_tag="VIC30_13205"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006224164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY7805373.1"
                     /translation="MSSNHDQTNPANPTSTTQDAPAKPQGALSGVRVLDMTAIGMGPL
                     CTQTLGDYGANVIKIESAGGDVFRHASPTQVPAMGAPFLQFNRNKRSLVLNLKTPEDL
                     KTLLDLAKDADVLIFNIRPQSMRKLGLGFEELAALNPRLIYCGVYGYSEQGTYAGEPA
                     YDDIIQAVGGLAHLQGRGQAPSFVTSIIADKIAGLTATHAILAALYERSSSGKGQAIE
                     VPMFETLVAFNMMEHMSEATFAKPQPQMGYARAVSPHRRPYRTQDGFIGLMPYTTEQW
                     QRFFELVGQPDVMQDARFSTASSRAQHVDELYTMLAEHVTTKTTDEWLTLLKQADIPS
                     GRVNSLNDLLENEHLASVGFFERFEDPTLGTVVLPKSPVNLSRTPTSVNRLAPQLGEH
                     TDEIKQNGW"
     gene            2163..>2548
                     /locus_tag="VIC30_13210"
     CDS             2163..>2548
                     /locus_tag="VIC30_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009519640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactosyldiacylglycerol synthase"
                     /protein_id="HEY7805374.1"
                     /translation="MSRFNGSNALTGPITLVYFNAGGGHRAAAHALKSQLNAQNPQWD
                     VRLVDLFEVLDPEQRFKRMTGFAPESYYNKRLSTGFTLGLKQELKVLQAMIRMAHPQL
                     VRRLVGYWHQIQPAMVVSLVPNFNRA"
BASE COUNT          543 a          638 c          730 g          637 t
ORIGIN      
        1 gaacgcaaag gtgatcacta tgtggtcagc ggcaccaagg tctggatttc gactgcccaa
       61 gtggccgaca aaatgttgct gctcgcacgc accacgccgc tagaagactg caaaagccac
      121 accgaagggc tgagtctgtt ctacaccgac gtgaaccgtg agtttgtgca agcacgtgaa
      181 attcctaaga tgggccgcaa agcagtggat tccaacgagc tctttatcga ccacctgccc
      241 gtgccggttg aggacttgat tggtgaggaa ggcaaaggct ttagttacat catgcacggt
      301 atgaatgttg agcgcattct gatcgccgct gaagccgtgg gtctgggtcg ggccgcgtta
      361 aagcgcgcca cgcactacgc caacgagcgt gaggtcttta accgacccat tggtatgaac
      421 caggcgattc agcatccgct ggcagccaac tggatggaac ttgaggccgc caacctcatg
      481 gtgtatcagg ctgccacctt gtttgaccaa ggcaaaccgt gtggtgccca agccaatgca
      541 gccaagtatc tggccggtga agctggattt aacgcttgcc agcaggcagt catgacacac
      601 ggtgggtttg gttatgccaa ggagtaccac gttgagcgat atctacgcga agtactgatt
      661 gcacgcattg cgccagtgag cccacaactg gtgttgtgct atatcgctga acgggtgttg
      721 ggtctgccca agtcgtactg attggtctta catcgactgg ttcaccagcc gttttgtttg
      781 atctcgtcgg tgtgttcgcc aagttgtggg gccagcctgt ttacgctcgt cggtgtgcgt
      841 gacaagttca ccggtgactt gggtagcacc acggtgccta aggtcgggtc ttcaaagcgc
      901 tcgaagaaac caactgaggc caagtgctcg ttttctagta aatcatttaa gctgttgaca
      961 cggcctgatg gaatgtcggc ttgcttgagc aacgttaacc attcatcggt ggtttttgtg
     1021 gtgacgtgct cggcgagcat ggtgtagagc tcatcgacat gctgggctct tgagcttgcg
     1081 gtgctaaagc gcgcgtcttg catcacgtca ggttggccaa cgagctcaaa gaaccgctgc
     1141 cactgttcgg tggtgtaggg catgagtccg ataaagccgt cttgggtgcg ataggggcgt
     1201 ctgtgcgggg atacggcacg cgcgtaaccc atctgtggtt gtggtttggc aaatgtggcc
     1261 tcactcatgt gttccatcat gttgaacgcc acaagcgtct caaacattgg cacctcaatg
     1321 gcttggccct tgccggacga gctgcgttca tagagtgccg ccaaaatcgc atgggttgcc
     1381 gttaacccgg caatcttgtc ggcaatgatc gacgtcacaa aactcggtgc ctggccgcgc
     1441 ccttgtaggt gagctagacc accaacagcc tgaatgatgt cgtcataggc cggttcaccc
     1501 gcataagtgc cttgttctga atagccataa accccgcaat agatcaagcg tgggttcagg
     1561 gcggctagtt cctcaaagcc aagcccaagt ttgcgcatgg actgtggccg gatattaaag
     1621 atcagtacgt ccgcatcctt ggccagatcc agtaatgttt ttagatcttc tggcgtttta
     1681 aggttcagta ccaggctgcg cttgttgcgg ttgaactgca aaaacggcgc acccatggca
     1741 ggcacttgtg tcggtgatgc gtggcgaaac acatcgccgc ctgccgattc aatcttgatg
     1801 acgttggcgc catagtcgcc aagcgtctgg gtgcaaagtg ggcccatccc aatggccgtc
     1861 atgtctaaga cacgcacacc agataaggca ccttggggtt tggctggtgc gtcttgagtt
     1921 gtgcttgttg ggttagcagg gttggtttgg tcgtggtttg atgacatgat tttatgtgct
     1981 ggcttgaatc gatacccatc gatcttaccc gtcgaacaac ttggtatggg gtctgcgctg
     2041 agcttcagtc taagtaaggg ttaaacatgg cttaagcatg tcacgcagga ttcatggtgg
     2101 gtcatgacgt tgtcatgttt gcccggtagc gtgaggcaac tttatttctg ctgtgttcgc
     2161 ttatgtcacg ctttaatggt tcaaacgcac tgacaggccc catcacactg gtgtacttca
     2221 acgcaggtgg cggtcaccgg gctgcagccc atgccttgaa atcgcaactc aatgctcaaa
     2281 atccgcaatg ggacgttcgt ctcgtggatt tgttcgaggt gcttgatccc gagcaacgct
     2341 ttaaacgcat gacgggtttt gcgccggagt cttattacaa caagcgattg tcaacgggat
     2401 tcacgctagg gcttaagcaa gagctcaagg tgttgcaggc catgatccgc atggctcacc
     2461 cgcaattggt tcgtcgtctg gtgggctatt ggcatcagat tcagccagcc atggttgtgt
     2521 cattggtgcc taactttaat cgtgccat
//
LOCUS       DATBNL010000777         2548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48555, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000777 DATBNL010000000
VERSION     DATBNL010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48555"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VIC30_13215"
     CDS             complement(<1..679)
                     /locus_tag="VIC30_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805375.1"
                     /translation="MSSIYFGRRVAPLLALGFASGLPLALTGGTLQAWATVENVSLQE
                     IGFLTLVGSAYTLKFLWAPLVDRYVPPLLGRRRGWMAVTQVLLAVSLMLMGLLSPANA
                     LGPLAMIAVLVAFFSATQDIAFDAYRTDVLRPVERGAGAALSVLGYRLAMLVSGGLAL
                     IIADQWLGWGQTYMLMGGLMLLGVLATLWGPEPEHPAQAPVSLRLAVVEPFREFFSRP
                     QVWTLLLL"
     gene            complement(672..1313)
                     /gene="metW"
                     /locus_tag="VIC30_13220"
     CDS             complement(672..1313)
                     /gene="metW"
                     /locus_tag="VIC30_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEY7805376.1"
                     /translation="MANKHDVRRDFERIGNWVDTRSRVLDLGCGDGDLLDYLHTVKQT
                     QGVGVEINDERVIACVKRGVNVIQQNLDEGLAMFGDQQFDTVVLSQTLQAVHQTEHVL
                     LEMVRVARMGVVSFPNFGYWPHGWSILRGRMPVTGQMPYAWYNTPNIHLCTLKDFEDL
                     CDKLGLRIVERVTFGPDNEVKWLPSWRATLALYRFTAAAQPSKQASDVGVLDE"
     gene            complement(1303..2505)
                     /locus_tag="VIC30_13225"
     CDS             complement(1303..2505)
                     /locus_tag="VIC30_13225"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEY7805377.1"
                     /translation="MNPTDTNATPEASVGIVQTQYVEFDEPLPLASGQQLERYTLAVQ
                     TYGTLNADKSNAVLICHALNASHHVAGVLADDPKEVGWWDNMVGPGKPVDTNHFFVIG
                     VNNLGSCFGSTGPASIHPETGKPWGAAFPVVTVEDWVMAQARLADRFGIDRFAAVMGG
                     SLGGMQALSWSITCPERVRHCVVIASTPRLSAQNIGFNEVARRAIITDPEYHGGDYYA
                     HDVVPKRGLSVARMIGHITYLSDDDMAEKFGRTQRAPSADGDWHYGYDVEFEVESYLR
                     YQGEKFSKYFDANTYLLITRALDYFDPARHAGGDLTRALASVQANFLLVSFSTDWRFP
                     PARSREIVKALLNNATPVTYAEIDAPHGHDAFLLEDARYHAVVRAYFKRIAQEVSQEI
                     SHEVSHGQ"
BASE COUNT          629 a          765 c          652 g          502 t
ORIGIN      
        1 tcaatagcaa caaagtccag acctgcggtc gagaaaaaaa ctctctgaag ggctcaacca
       61 ccgcaagcct aagcgacacg ggtgcttgcg ccggatgctc tggctctggg ccccacaaag
      121 ttgccaacac cccaagcaac atcaagccac ccatgagcat ataggtttgc ccccagccca
      181 accactgatc ggcgatgatc aacgccaaac caccagacac aagcatggcc aaacgatacc
      241 caagcaccga tagcgctgca cccgcgccgc gctcaaccgg tcgtaaaaca tcggtgcggt
      301 aagcatcaaa cgcaatgtct tgtgtggctg aaaagaaagc caccaacacc gcaatcatcg
      361 ccaaaggtcc caacgcattg gccggtgaga gcaagcccat gagcatcaaa ctcacagcga
      421 gtaacacttg cgtgactgcc atccagccgc gccgcctacc gagtagcggc ggcacataac
      481 gatccacgag cggtgcccag agaaacttca gtgtgtaggc agagcccact agcgttaaaa
      541 aaccaatttc ctgcagcgaa acgttctcaa ccgtggccca agcctgcaac gtgccaccgg
      601 tcagcgccaa tggcaagccg ctggcaaacc ccagtgctag caacggggca acgcgacgac
      661 caaaataaat gctactcatc cagcacgccc acgtccgagg cctgcttcga gggttgcgca
      721 gctgcagtaa agcgatagag cgccaatgtg gctctccagc ttggtagcca cttgacctcg
      781 ttgtcaggac caaaggtcac gcgctcaaca atgcgcaacc ccaacttgtc gcataggtct
      841 tcaaagtcct tgagcgtgca aagatgaatg ttgggcgtgt tgtaccaggc atacggcatt
      901 tgacctgtta ccggcatgcg cccgcgcaga atcgaccaac catgtggcca gtagccaaag
      961 ttaggaaacg acaccacgcc catgcgtgcc acacgcacca tttcaagtag gacatgctcg
     1021 gtctgatgca cggcctgtaa cgtttgtgac agcaccacgg tgtcaaactg ctgatcacca
     1081 aacatggcca acccctcgtc gaggttttgt tggatgacat tgacaccacg tttgacgcag
     1141 gcgatcacgc gctcgtcgtt gatttcaaca cccacacctt gtgtttgttt gactgtgtgt
     1201 agatagtcca gcaaatcgcc atcaccacaa cccaagtcca acacccggct gcgcgtatcc
     1261 acccagttgc caatgcgctc aaaatcgcga cgcacgtcat gcttattggc catgcgacac
     1321 ctcatgcgat atctcttgcg aaacctcttg agcgatgcgt ttgaagtagg ctcgcaccac
     1381 cgcgtgatag cgcgcgtctt ccaacagaaa ggcgtcgtgt ccgtgtggtg cgtcaatctc
     1441 ggcgtaagtc actggcgtgg cgttattcag tagcgccttg actatttcgc gtgagcgcgc
     1501 cggtggaaac cgccagtcag tagaaaacga caccaacagg aaattggctt gaacgctcgc
     1561 gagcgctcgg gtcaggtcac cgcccgcgtg acgcgctgga tcaaaataat cgagtgcacg
     1621 cgtaatgagt aagtaggtgt tggcatcaaa gtatttagag aacttctcgc cttgatagcg
     1681 aaggtaggac tcaacttcaa actcaacgtc ataaccatag tgccaatcgc cgtcagcact
     1741 cggtgcacgt tgcgtgcggc caaacttctc tgccatgtcg tcatcagaga ggtaagtgat
     1801 gtgaccaatc atgcgtgcca cagacaaccc gcgcttaggc accacgtcgt gcgcataata
     1861 gtcaccacca tgatattcgg ggtcggtgat gatggcgcgc ctagccacct cattaaagcc
     1921 aatgttctgg gccgataacc tcggggtgct ggcaatcacc acgcaatgac gcacacgctc
     1981 ggggcaggta atcgaccagc taagtgcctg catgccaccg agtgagccac ccatgaccgc
     2041 cgcaaaccgg tcaatgccaa atcgatccgc caagcgcgct tgcgccatga cccagtcttc
     2101 gactgtcacc accggaaagg cagcgcccca cggtttaccc gtctccgggt gaatcgacgc
     2161 aggtccagtc gacccaaaac atgaaccaag gttgttgaca ccaatcacaa aaaaatggtt
     2221 cgtgtcgacc ggtttgcctg ggccaaccat gttgtcccac cagccgactt ctttagggtc
     2281 gtcagctagc acacccgcca catggtgcga ggcattgagt gcatggcaaa tgagtacggc
     2341 gttgcttttg tcggcattca aggtgccgta tgtctgcacc gccagcgtat aacgctcgag
     2401 ctgctgtcca gatgccagcg gcagtggttc atcgaattca acgtattggg tttgcacaat
     2461 gcccacggac gcctcaggcg ttgcattcgt atctgttggg ttcaaatccg tttgggttgt
     2521 atcggttcgg ggtgaatcgc tttgggtt
//
LOCUS       DATBNL010000778         4041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48578, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000778 DATBNL010000000
VERSION     DATBNL010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4041
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48578"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VIC30_13230"
     CDS             <1..367
                     /locus_tag="VIC30_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013394797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HEY7805378.1"
                     /translation="MLLAVLHRHGGVATSDQDVFVNAVGGVKITEPAADLPILLAILS
                     SLRDKPLPVGLVSFGEVGLAGEVRPAPRGQERLKEAAKLGFSVAIIPAANAPKQPIEG
                     LKVIAVNRLSQAIDAVRQV"
     gene            371..2857
                     /locus_tag="VIC30_13235"
     CDS             371..2857
                     /locus_tag="VIC30_13235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY7805379.1"
                     /translation="MLRFAIKQTWRDFRAGDLRLLGMAVVVAVAAISSVGFLSDRVSR
                     ALDRDAGQMLGADLVVELPAEADQGWIDKAKNDGLGAIRIWRFPSMVGSTSGDLQLAS
                     VKAVENGYPLRGELRTSRGITEPDEPTVAAPDPGNAWVDGQLLALLGLSVGDELSVGD
                     KTLNIDRVITYEPDRGVQFVNVAPRVMIRAEDLEDTGLLGPGSRVSHAMLVAGDTPAV
                     DAYRDWLVPQLTPAQELVTVDDGRPEITRTLERANEFLTLVVMIAVLIAAVAVALGAR
                     RFSQRQQPAIAVMRCCGATQATVTRLLVVEFLVVALVGSAIGLVIGWTAQLFLVSVME
                     GLVSDSLPGVGWVPALQGLYAGFWLLFAFSLPPLQALRRVSAAQILRQDVPAFPVQSV
                     AGYVLAFVGFAVLMWWIAGNIEYGFGLAGGFVLAAVLFGLLSFVALKGLNVLRPLLGH
                     RPAWRFALAGMVRRRSSSIAQISALAIGMMAILLLTIVRTDLLQGWQQTVPPDAPNRF
                     LINIQPDQVKPVDTALTNAGIEQLEFYPMIRGRVTDINDQAVTAEDFESPRAQRLLQR
                     DFNLSYADALPENVELLAGSPLNADAMEVSLERDVANLLGMSVGDDMVFEVAGQPVAV
                     TVSSIRQVNWDSLQPNFFAVLSTRALIDEPQTFITSFHLPPEKAPVTQSLIREFPNLT
                     IFDVGALLAQLQSVLDRVSVAIQGLFAFAILAGAIVLAAALSSSRHERTREAALLRAI
                     GATNVQLARAQRVELLSIGALAGLMAATGATLAAWALATWVFEFPMQWSITPWVLGLA
                     VCMPGAWLAGSLVLRGVLKSPPLLILRNET"
     gene            2847..3623
                     /locus_tag="VIC30_13240"
     CDS             2847..3623
                     /locus_tag="VIC30_13240"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: protein motif:HMM:NF002475.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HEY7805380.1"
                     /translation="MRPDRQASLAGAALSGTALSGTALTGTSLIHEGACWLWRDDRFE
                     ADALWPYLHPEGDFPEGTRIQTGGRGAAWNIEIAGEKFVCRHYRRGGMMARISSDLYV
                     WTGLDHTRAYREFAVMRRAAQAGLAVPKPAAAMVCRVSGLWGLGSLFYRASILTPRID
                     HVGSLAKVASESGWFNAGRAIAQMHAAGIWHADLNVHNILLDAQDRAWLIDFDRAQEG
                     VTDSRQLQGNLSRLLRSVNKVCPALGQRFWSVLCDGYGQG"
     gene            3786..>4041
                     /locus_tag="VIC30_13245"
     CDS             3786..>4041
                     /locus_tag="VIC30_13245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY7805381.1"
                     /translation="MVARLLSVVMAGTLGWMGVASAQDDQVNIYNWAEYTAEDTIPGF
                     ERQSGKSVQYDTYDSNDTLQAKLLTGSSGYDIVVPSTHYAK"
BASE COUNT          740 a         1002 c         1275 g         1024 t
ORIGIN      
        1 gatgctactg gccgtgttac accgacatgg gggcgtggca acctcggatc aggacgtgtt
       61 tgtcaacgcg gttggtggcg tcaaaatcac cgagcccgcc gccgacttac cgattttgct
      121 ggccattttg tcttctttgc gggacaaacc attacccgtt gggctggtgt catttggtga
      181 agttgggttg gctggcgaag tgcgaccggc accgcgtggt caggaacggt taaaggaagc
      241 ggccaagttg gggttttctg tggcgattat tcccgcggcc aacgcaccca agcaacccat
      301 cgagggtctt aaggttattg cggtcaatcg tctgtctcag gccattgacg ctgttaggca
      361 ggtgtagaac atgttgcgat ttgcgattaa acagacttgg cgtgatttca gggcaggtga
      421 tttacgcttg ctcggtatgg cggtggtggt tgccgtggcg gccatcagca gcgtgggctt
      481 tttgtccgac cgggtttcgc gcgcgcttga tcgcgacgcg ggtcaaatgc tcggtgccga
      541 cttggtggtg gagctacccg ccgaggccga tcaaggatgg atcgacaaag caaaaaacga
      601 tgggttgggt gcgattcgga tttggcgctt tccatccatg gtgggcagca cgagcggtga
      661 tttacagttg gcctcggtca aggctgtaga aaacggctac ccattgcgtg gcgagctgcg
      721 caccagccgc ggcatcactg aacccgatga gcccacggtt gccgcgcctg accctggcaa
      781 tgcatgggtc gatggtcaat tgctggcttt attgggtctt tctgttggtg atgaactcag
      841 tgttggcgat aaaaccctga acattgatcg cgtcattacc tacgaacccg accgtggcgt
      901 gcagttcgtt aacgtcgccc cgcgcgtcat gattcgtgcc gaggacttag aagacacagg
      961 tctgcttgga cctggtagtc gtgtctcaca cgccatgttg gtcgccggcg acacaccggc
     1021 cgttgacgcc taccgcgact ggctggtgcc gcaattgacc ccggcacagg aattggtcac
     1081 ggtcgatgac ggtcgcccgg aaattactcg aacgctggaa cgagccaatg agtttttaac
     1141 gctggtggtc atgattgcgg tgctcatcgc agcggtcgct gttgcgctgg gggcacgacg
     1201 tttcagtcag cgccagcaac ctgccattgc tgtgatgcgt tgttgtggtg ccacccaagc
     1261 gacagtgaca cgactgctgg tggtcgagtt tctggtggtc gcactcgtgg gatcagccat
     1321 tggtctagtg attggctgga ccgcgcaact gtttctggtc agcgtcatgg aaggtttggt
     1381 cagtgatagc ttgcctggcg tgggctgggt gccggcttta caagggctgt atgcagggtt
     1441 ttggttattg tttgcgtttt ctttaccgcc gttacaggct ttgcgtcgcg tctcagccgc
     1501 gcagatcctg cgccaggacg tgccggcctt tccggtacaa agtgtcgcgg ggtacgtgtt
     1561 ggcctttgtc ggattcgcgg ttttgatgtg gtggatcgct ggcaatattg aatacggttt
     1621 tggattggcc ggtggttttg tgttggccgc tgtgctcttt ggactgctgt cgtttgtggc
     1681 gcttaagggc ttgaatgtgt tgcgtccctt gcttggccat cggccagcct ggcgatttgc
     1741 gttagctggc atggtgcgtc gtcgctcatc atcgattgcg cagatcagtg cgttggccat
     1801 tggcatgatg gcaattttgt tgttgaccat tgtgcgcacg gatctgttgc agggttggca
     1861 gcaaaccgtg ccaccggatg cgcccaaccg gtttctgatc aatatccaac ccgatcaagt
     1921 caaaccagtc gatactgcac tgaccaatgc cgggatagaa caacttgagt tctacccgat
     1981 gattcgcggt cgggtgactg acatcaacga tcaggctgta acggctgaag attttgagtc
     2041 gccgcgtgcg caacgccttt tgcagcgcga ctttaatttg tcttacgctg acgccttacc
     2101 agagaacgtt gagctcttag cgggtagtcc gcttaatgct gatgccatgg aagtctcgct
     2161 cgagcgagat gtggctaact tgctgggcat gagcgtgggt gatgatatgg tgtttgaagt
     2221 tgccggtcag cccgttgctg tgaccgtctc aagtattcgg caagtgaact gggactcatt
     2281 gcagcctaac ttttttgccg tgttgtccac gcgcgcgttg atcgatgagc cacagacgtt
     2341 cattacgtcg tttcacttac cgccagaaaa ggcgcctgtg acgcagtcct tgattcgcga
     2401 gtttccgaac ttaaccatat ttgatgtggg cgctttgcta gcacagttgc agtcagtgct
     2461 ggatcgcgtg tcggttgcaa ttcaaggttt gtttgccttc gccatcctgg caggtgccat
     2521 tgtgttggca gcagccttga gttcgagtcg gcatgagcgc acgcgtgagg ctgctttatt
     2581 gcgtgccatt ggtgccacca acgtgcaact agcgcgtgcg caacgcgtcg aactgctaag
     2641 tatcggtgcc ttggccgggt tgatggcggc tacaggtgcc acgcttgcgg cctgggcgct
     2701 cgcgacttgg gtgtttgagt tccccatgca gtggtccata acgccttggg tgctggggct
     2761 ggcggtttgc atgccgggtg cttggctggc gggatcgttg gtcttgcgcg gggtgctcaa
     2821 gagcccgcca ctattgatct tgcgaaatga gacctgatcg ccaggcatcg ctggctggtg
     2881 cagcattgag cggcacggct ctgagcggca cagccctgac cggtacgtcc ctgatacacg
     2941 aaggcgcctg ttggttgtgg cgggatgacc ggtttgaagc tgacgcatta tggccgtacc
     3001 tgcatcctga gggtgatttt cctgagggca ctcgtatcca aacaggtggg cgaggtgcgg
     3061 cttggaatat tgaaattgct ggcgaaaagt ttgtttgccg ccattatcga cgcggcggca
     3121 tgatggctcg tataagttct gatttatacg tttggacagg gcttgatcac acccgcgcct
     3181 atcgcgagtt tgctgtgatg cgtcgtgccg cccaagcggg actggcggtt ccgaagcctg
     3241 ccgcggccat ggtttgccgc gtgagtggtt tgtggggatt ggggagctta ttttaccgcg
     3301 cgagcattct gacaccacga atcgatcacg tcggtagctt ggccaaggtc gccagcgaat
     3361 caggctggtt taacgccgga cgcgcgattg cgcagatgca tgccgcgggt atctggcacg
     3421 ccgatttgaa cgtgcacaac attttgctgg acgcgcaaga ccgagcctgg ctgattgatt
     3481 ttgatcgagc ccaagagggc gtgacggata gtagacaact ccaagggaat ctgagccgtc
     3541 tgttgcgttc agttaataaa gtatgccccg cactggggca gcgcttttgg tcagtgttgt
     3601 gtgacggtta cggccaaggt taaaaattga ctgaatcgta ttgaggtggg gtgcgtggcc
     3661 gcgcaaaatg gctttagaat cacatcgacc gttcccgttt tgtgatgaaa cgggtttttt
     3721 tattgacgat gttgttatcg gcttggggta tttaaagccc cgggtcacag atcagggagg
     3781 ctctcatggt tgcacgtctt cttagtgtgg taatggcagg tacgcttggt tggatggggg
     3841 tggcaagcgc ccaagacgac caagtcaaca tatacaactg ggcggagtac accgccgagg
     3901 atacgatccc gggtttcgag cgccagtccg gcaaaagtgt gcagtacgac acctacgata
     3961 gcaacgacac cctgcaagcc aagttgctca ctggcagctc gggttatgac atcgtggtgc
     4021 catcgacgca ctacgccaag c
//
LOCUS       DATBNL010000779         3991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29286, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000779 DATBNL010000000
VERSION     DATBNL010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29286"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VIC30_13250"
     CDS             <1..561
                     /locus_tag="VIC30_13250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805382.1"
                     /translation="GNKRTARLMQTAALVRAQVLPLLFKDTLIRKYQKATLHYYETGE
                     YRPYVDFFKENYELAVFALAGRPDASDYRNDSSETAEFDRRVQALPDMAQIAEITKTA
                     MGPGVAGVFYRLAQEEIIARGSPRSVNWADIERRTIVKAIAEHGLPKEEVLQVLLSHS
                     PGTASPLRQAQVADDIERLDSVLRTG"
     gene            complement(755..1087)
                     /locus_tag="VIC30_13255"
     CDS             complement(755..1087)
                     /locus_tag="VIC30_13255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEY7805383.1"
                     /translation="MKVRLIRIGNSRGVRIPARLLKSISAGDDANVEMNIEVRGNSIV
                     LTPTSSATSCATSSATSSATSSATSCAAPARQGWSAAFRAAGASQMDDLCLTGSLVNG
                     FDECEWTW"
     gene            1272..1556
                     /locus_tag="VIC30_13260"
     CDS             1272..1556
                     /locus_tag="VIC30_13260"
                     /inference="COORDINATES: protein motif:HMM:NF021431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HEY7805384.1"
                     /translation="MQILGLPIIEAFKKDHAASRGPLDAWRAAVEREQWKTTHDIKHR
                     YRSADFLADNKVIFNIKGNSYRLVVQVRYQNGIVVVLWVGTHADYDKKSF"
     gene            1607..2827
                     /locus_tag="VIC30_13265"
     CDS             1607..2827
                     /locus_tag="VIC30_13265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004629352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEY7805385.1"
                     /translation="MNVKIIKSEQEYEQAMARLSALMSRDLKPGSKDENELELLALVI
                     GDYERQTVPAVKVDPIESILFRMDQMKLSRKDLVPFIGSLSKVSEVLARKRPLSLSMI
                     RRLHRGLDIPAEILIEDMSVDSAIVCQDPPMDFTRFPLKEMMDRGCFADAQLNAQQLK
                     HLTEYAEDLMHKFMEDLLPKQVGQTFMRAPMHQRGVRHADEMALLAWRLCVLRQARAV
                     TIAKRYTPGVITLAWLRDLAKLSAFDEGPKLAREYLARHGITLVVEKHFKGTFLDGGA
                     MLDGDRPIVALTLRHDRLDNFWFVLMHELAHVAKDLSPESPVFIDDLEGKDPKEIETQ
                     ADAMAMEALIPAKHWRDATVRKTLSSKDAKALADKLGIHVAIVAGRLRHETSNYRLLS
                     HLIGKTGQVSQLLV"
     gene            complement(3212..3700)
                     /locus_tag="VIC30_13270"
     CDS             complement(3212..3700)
                     /locus_tag="VIC30_13270"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY7805386.1"
                     /translation="MASKLARTLRVDLKMGLTAVLSTFVTVALIGAVPVATAHEGATG
                     IVKERMDRFKASKTSLQTMKQALKTEDWTVLQTEAEQLNVWANEMVDYFPEGSNQAPS
                     EARDAVWQDWDGFVRAVQAFGVTTQDLVSAVDNRSVNEATLAFKATAQSCKACHDSFR
                     KE"
BASE COUNT          977 a         1035 c         1007 g          972 t
ORIGIN      
        1 ggcaataagc gcacagcccg cctgatgcaa accgccgcat tggtgcgagc gcaggtgttg
       61 ccactactgt ttaaagacac cttgattaga aagtaccaga aagcgacatt gcactattac
      121 gagacgggtg aatacagacc gtacgtcgat ttttttaaag aaaactatga gttagctgta
      181 tttgctttag ccggccgacc cgatgccagt gactatcgaa acgactccag cgagacagct
      241 gagtttgacc ggcgtgtgca ggcactgcca gacatggcgc agatcgccga gataaccaaa
      301 acggcaatgg gcccaggtgt tgccggcgtg ttttacaggt tggcgcaaga ggaaatcatt
      361 gcgagaggct caccccggtc tgttaattgg gccgacatcg agcgacgaac catcgtcaag
      421 gcaattgcag aacacgggtt acccaaagaa gaggtcctgc aggttttgtt atcgcacagt
      481 ccgggcaccg catcaccact gcgtcaagca caggttgctg acgacattga gcggctagat
      541 tctgtattac gcactggcta atattgcatg accaattccc cgatacggaa gccctagtgc
      601 tgaagccctg tcactgaagc cctattactg aagcactgtc actggactgc ggtgttcgcg
      661 cagtgtcggg gtacttggct aattgaaatg gccgacgcct atcaatgaca gtcgggccat
      721 gacagttagc ggcaattttg caggtgaggt catctcacca tgtccactcg cactcatcaa
      781 acccgttgac aagagatccc gtcaagcaaa ggtcatccat ttgactcgca cctgctgcac
      841 gaaatgccgc actccaaccc tggcgagctg gggccgcaca agaagtcgca gaggaagtcg
      901 cagaggaagt cgcagaagaa gtcgcacaag aagttgcact agaggtcggc gttaacacaa
      961 ttgagttgcc acgcacttcg atattcatct caacatttgc atcatcacct gcgctgattg
     1021 acttgagcaa acgagccggt atgcgcacgc cgcgcgaatt accgatacgg atcaatcgga
     1081 ctttcatgtg gatccaatcc tagaataatt gctaagcatt aataatgcca ttaccatatt
     1141 gacaatgtta tcaccttgcg agccggccac ggcatgctcg tgcgtgattc ccattaaaga
     1201 aaacacttgt gatatatttt cccattttgg gatatataat cttcatttaa gcagcaaccg
     1261 actcctctca gatgcaaatt ttgggcctgc ctatcattga ggcgtttaaa aaagatcatg
     1321 ccgcctcacg aggtcctttg gatgcttggc gagctgctgt agagcgtgaa caatggaaga
     1381 caacccacga cattaaacat cggtaccgat cagcagattt cttggctgac aataaggtta
     1441 tctttaatat caagggtaac tcataccggt tagtggttca ggttagatat cagaacggga
     1501 tcgttgtggt tttgtgggtc gggactcatg ctgactacga taagaagagt ttttaggcag
     1561 ttcggtgcgt caagcgccat ggacaatggg acgaggctag accacgatga atgtgaagat
     1621 catcaaaagt gagcaagagt acgaacaggc gatggcgcga ttgtctgcgc tcatgtcgcg
     1681 tgaccttaag ccaggctcca aagacgagaa cgagctcgag ctgttggcgt tagttattgg
     1741 cgattacgag cgtcagaccg tgcctgcagt gaaggtagat ccgattgagt cgattttgtt
     1801 tcgtatggac cagatgaaat tgtctcgcaa ggatttggtg cctttcattg gttcgctatc
     1861 caaggtctca gaagtcttag cccgtaaaag gccactgtcc ttgtcgatga ttcgtcgact
     1921 ccatcggggt ttggatattc cagcggagat cttgattgag gatatgagcg ttgatagcgc
     1981 gatcgtctgc caagacccac caatggactt cacccgcttc ccgttaaagg aaatgatgga
     2041 ccgaggctgt tttgcggatg ctcaactcaa tgctcaacag ctaaagcatt taaccgagta
     2101 cgccgaggat ttgatgcaca aattcatgga agatctactg cctaagcagg tcggtcagac
     2161 tttcatgcgg gcaccgatgc atcaacgtgg tgtgcggcat gctgatgaaa tggctctttt
     2221 ggcatggcgg ttgtgcgttt tgcggcaagc gcgagcagtg accatcgcca aacgatacac
     2281 ccctggcgtc atcacgcttg cctggttacg cgacttggcc aaactttctg cgttcgatga
     2341 gggtcctaag cttgcgcgtg agtatctagc gcggcacggc atcacgctcg ttgtcgagaa
     2401 gcactttaag gggacctttc tagatggagg tgccatgctc gacggtgacc gccctatcgt
     2461 cgcactgaca ttaaggcatg atcgactcga taacttctgg tttgtgttga tgcacgaact
     2521 ggcacacgtt gccaaagatc tatcgcctga gtcccccgtc tttattgatg accttgaggg
     2581 caaagacccc aaagagatcg aaacacaggc agatgccatg gccatggaag cattgatacc
     2641 tgccaagcat tggcgagatg ccactgtgcg caaaacgctt tcatccaaag acgcaaaagc
     2701 acttgctgac aaacttggta tccatgtcgc cattgtcgct ggccgacttc gtcacgaaac
     2761 gagtaactac cgtctgctgt cacacctgat cggcaagacg ggtcaggtca gtcagttgct
     2821 tgtttgacag catccccgtc ctgaatgatg agaattccta gcggttttct tgagtcgcta
     2881 cgacccgcca cgattagatg tgtatcgcta ataccccaca aggtagggca attgcatgga
     2941 tgtagcaggt ctgctcttga ttggtcttaa ccgtcttgac agtcttagcg agcatctggt
     3001 gtctatttaa aaatcgttgt cggggatcgc gtggcgacta cgtttgggca agctcacaag
     3061 atcaagcgtt ttgtcgtgtt catcgtggtc tggatcagca agcgcacgag cctgagacca
     3121 gcgcagaggt atgatcgcct aaactttgcc accaccactg tggggttgct gtgtggttgc
     3181 ttgacttgag cgcaacctct caattacggc ctcactcttt cctaaaactg tcgtgacagg
     3241 ccttgcatga ctgggccgtc gccttaaacg ccagtgtggc ttcattgact gatcgattat
     3301 cgactgcgct gacaagatcc tgagttgtca caccaaacgc ttggaccgcc cgcacaaacc
     3361 cgtcccagtc ttgccacacc gcatcgcgtg cctcagacgg ggcttggtta ctgccctcag
     3421 gaaagtaatc gaccatctca ttggcccaga catttaattg ctctgcctcg gtttgcaaca
     3481 ccgtccagtc ttcggtttta agtgcttgct tcatggtctg caagctggtt ttactggcct
     3541 tgaatcgatc cattcgctct ttaacgatac cggtggcacc ctcgtgagcc gtggcgaccg
     3601 gcactgctcc tatcagagcc acagtcacaa acgttgacaa aaccgccgtc aaacccattt
     3661 ttaaatccac cctcaaagtt cgcgccagtt tgcttgccat tctcaatccc atcccagttg
     3721 tttaaaagcg gttactacaa agcagttgaa gagctcaacc gcttacctat acccacctga
     3781 cccgcacgtg cctgaacctc atgcacctaa accgcacacc ctagcgtacc agtacgcaag
     3841 ccgtcatgat ccatcgtgac tcaacgtggc tcaccgtgac gcaatgtgac atttcagccc
     3901 agaagatctt gctggatcaa actgatctgt tcggcatacc gctcgctgtc ttcattgatc
     3961 cactgagtgt gttgcgggtc ttcaataaag t
//
LOCUS       DATBNL010000780         1578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_178533, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000780 DATBNL010000000
VERSION     DATBNL010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178533"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..>1578
                     /locus_tag="VIC30_13275"
     CDS             112..>1578
                     /locus_tag="VIC30_13275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY7805387.1"
                     /translation="MTATPTDQNESLIEPVPNKSGDSAQTSDNDLATANKAKPARAKR
                     TRSAKLRAPFRRRRNADEAQVDAQNPAAQNAVAETTDDAQIQTVSDNAAAIEVEDAPV
                     EALTYLEASPKTAQRLGKYLQSDVLMPKLHKVLAQSGIGSRREMEELIIAGRVSVNGE
                     PAHIGQRVGSNDVVRVNGKPVNRLASQKPPRVVLYHKPAGEIVSHDDPAGRATVFSRL
                     PRLKVGKWLSIGRLDLNTEGLLIFTTSGDLANKLMHPRYGNEREYAVRVLGELTDDLR
                     QQLLAGVELDDGLAQFSSLEFLGGEGSNRWYRVTLQEGRNREVRRIFEFVGLTVSRLI
                     RTRFGEIVLPNNLRRGRWDELSGDLVNALLVQVGLLKDDDDVGGSARGKSRKPRQPTS
                     HDNAMPPGFTVPARAPSGAPAGARGGSRKPSGGRPGSRGAARSRPRTGAQPDPLATSI
                     TSIAGGFAGGQPSGGGARRKPRPAGAGAAAPAATSGQPR"
BASE COUNT          358 a          420 c          484 g          316 t
ORIGIN      
        1 taatgaggta gtcggtgaag ttccaaacga caatgagcaa gcactgccaa gcagtgacgt
       61 ttcaggcgaa agccctgatg atatccatcc caagcgcgaa tcggagtaaa tgtgaccgcg
      121 acccctacag accaaaacga atcattaatt gaacccgttc ccaataaatc tggtgactca
      181 gcccagacgt ctgacaacga cttggccact gcgaacaaag ccaagccggc gcgtgccaaa
      241 cgcactcggt cggccaaact aagggcgccg tttcggcgtc gacgtaacgc ggacgaagcg
      301 caggtggatg cacaaaaccc agccgcacaa aacgcagttg ccgaaacaac cgatgacgca
      361 cagattcaaa ccgtgagtga caatgctgcg gctattgagg ttgaagacgc accggtggaa
      421 gcactgactt atttagaggc atcgccaaag acagcacaac gtctaggcaa atatcttcaa
      481 agcgatgtgt tgatgcccaa gctacataaa gtgcttgctc agtcgggtat cggctcgcgg
      541 cgtgagatgg aggagttgat aatcgctggc cgtgtatcgg tcaacggtga accagctcac
      601 atcggtcagc gtgttggcag caacgatgta gttcgggtca acggcaagcc ggttaatcgc
      661 ttggcaagtc aaaagccgcc gcgtgtggtg ctctaccaca agccggcagg cgagattgtc
      721 agtcatgatg atccggcagg tcgggcgacc gtgttttctc gcctgccgcg tttgaaggtg
      781 ggcaagtggt tgtccatcgg gcgcctagac ttaaataccg aaggcctact catcttcaca
      841 acgtctggcg atttggccaa caagcttatg caccctaggt acggcaatga gcgcgagtac
      901 gctgtgcgtg tgcttggcga gctgacagac gatttgcgcc aacagttgtt agctggcgtg
      961 gagcttgatg acggccttgc ccagttttca agtttggagt ttcttggtgg cgagggcagt
     1021 aaccgttggt atcgggttac cttgcaagag ggtcgtaacc gcgaagtgcg acgtatcttt
     1081 gagttcgttg gcctaacagt cagccgcctg attcgcacac gattcggtga gattgtgttg
     1141 cctaataact tgcgtcgtgg gcgctgggac gagctcagtg gcgatctcgt caatgcgttg
     1201 ctcgtccagg ttgggctctt gaaggatgac gatgatgtgg gtggcagtgc gcgcgggaaa
     1261 tcacgtaagc cgcgccagcc tacaagccat gacaatgcca tgccaccggg ctttactgta
     1321 ccggcgcgcg cgccgtcggg cgcacctgcc ggtgcacggg gtgggtcccg taaacccagc
     1381 ggtgggcgcc caggctctag aggcgcagca aggtccaggc cacgtacggg tgctcaacca
     1441 gatccacttg cgacttcgat tacgagcatc gcgggcgggt ttgccggtgg acaaccaagc
     1501 ggtggtggtg ctagacgtaa gccacgtccg gcaggcgctg gtgccgcagc acctgcggcg
     1561 acatcgggac agccgcgt
//
LOCUS       DATBNL010000781         3049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_118983, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000781 DATBNL010000000
VERSION     DATBNL010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3049
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118983"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..1633
                     /locus_tag="VIC30_13280"
     CDS             71..1633
                     /locus_tag="VIC30_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016833912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEY7805388.1"
                     /translation="MISPDPITVTDSGKQAPENRVSAKLARQETSQSSTSTRKRATTQ
                     RKPAKTQRSKPASATKLFVLDTNVLMHDPTSLFRFEEHDVYLPMMTLEELDLHKKGMS
                     EVARNARQVSRSLDALVENLEQLELGIELNRLGNKDATGRLFFQTTAISKNLPDDLPM
                     GKADNQILGVVRALQQQFDDREVVLVSKDINMRLKARALGLAAEDYFNDHVLEDTDLL
                     YSGVQVLPEDFWNKHGKDVESWQQGGITFYRVRGPLCSQFMVNQFVYFEGQLPLHAQV
                     REVSGKTAVLATLRDYTHAKNNIWGITARNREQNFAMNLLMDPDIDFVSLLGHAGTGK
                     TLLTLAAALTQVLETKRYTEIIMTRVTVPVGEDIGFLPGTEEEKMLPWMGALEDNLDV
                     LNMGDGDGNTGSNNDWGRAATMDLIRSRIKVKSLNFMRGRTFLNKFLIIDEAQNLTPK
                     QMKTLITRAGPGTKVVCLGNIAQIDTPYLTEGSSGLTFVVDRFKGWPHAGHITLQRGE
                     RSRLADYAGDVL"
     gene            1633..2613
                     /gene="pdxA"
                     /locus_tag="VIC30_13285"
     CDS             1633..2613
                     /gene="pdxA"
                     /locus_tag="VIC30_13285"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019939025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEY7805389.1"
                     /translation="MAEQSRLAITMGDPAGIGPEIVAKLFTHGTANCIVYGDAQCFER
                     ATERLNLELPLTVLTSPSDPLPSLGVPLIQACDPVTPELKLGQISSEAGKAAYQCVER
                     AITDALAGLVGGVVTAPLSKKAIELAGFDFPGHTEILAHRCGNVPVAMMLANDEIRTV
                     LVTIHIPLSAVAQTITQPLETQAIELAHRGCVELGIAEPRIAVAGLNPHASESGKFGD
                     EEERIIKPAIEAAKASGFNVSGPWPGDTIFGRARQGEFDVVVAQYHDQGLIPVKYLGL
                     DQGVNITIGLPFVRTSVDHGTAFDIAELGVASPASLEQAVSIARTLIAHR"
     gene            complement(2625..>3049)
                     /locus_tag="VIC30_13290"
     CDS             complement(2625..>3049)
                     /locus_tag="VIC30_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HEY7805390.1"
                     /translation="ARQCGRLGLIVIDYIQLMSSSGGGENRATEISEISRALKSLAKE
                     LECPVVCLSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG
                     TAEIIIGKQRNGPIGTVRLTFQGESTKFLNFTGGGGSY"
BASE COUNT          765 a          836 c          787 g          661 t
ORIGIN      
        1 cacagaaacc gacgtggtga ccacccaacc gttttctgac gaaccttcga ccatcgaaac
       61 gtcactgagc ctgatcagcc cagatccaat aactgtcact gattctggga aacaggcgcc
      121 cgagaaccgc gttagcgcta agcttgctcg gcaggagacg agccaaagct cgacaagtac
      181 tcgcaaacgg gcaactaccc agagaaagcc cgccaaaacc cagcgctcca aaccagccag
      241 tgcgaccaag ctcttcgtgc ttgacaccaa cgtgttaatg cacgacccaa caagcttgtt
      301 tcggttcgaa gagcatgacg tctatctgcc catgatgacg ctagaagagc tcgatcttca
      361 caagaaaggc atgtctgaag tagcgcgtaa cgcacgtcaa gtgagccgat cactcgatgc
      421 gctggttgaa aacctcgagc agcttgagct tggaatcgaa ctgaaccgct tgggcaataa
      481 agatgccact ggccggctct ttttccagac cacagcgatt agcaagaact tgccagacga
      541 cttacccatg ggtaaagccg acaaccagat tctcggtgtc gtgcgcgcgt tgcagcagca
      601 atttgacgac cgcgaagtcg tgctggtttc gaaagatatc aacatgcgct taaaagcgcg
      661 tgcgttgggt ctggctgcag aagactattt caacgaccac gttcttgaag acaccgattt
      721 gttgtactcc ggtgtgcagg tattgcctga agacttttgg aacaaacacg gcaaagatgt
      781 tgagtcctgg caacaaggcg gcatcacgtt ttatcgggtg cgtggtccgt tgtgcagcca
      841 attcatggtt aaccaatttg tctacttcga ggggcaattg cccctgcatg ctcaggtgcg
      901 cgaggtcagt ggcaaaaccg ccgtgcttgc cactttacgc gactataccc acgcaaagaa
      961 caacatctgg ggcatcacag cacgcaaccg tgaacaaaac ttcgccatga acctgctcat
     1021 ggatccagac attgattttg tctccctgct cggacatgct ggcaccggta aaacgctgct
     1081 tacattagca gctgcactca cacaagtgct tgagaccaaa cgctacacag aaatcatcat
     1141 gacacgcgta acagtccctg ttggtgagga catcgggttc ttaccaggca ccgaagaaga
     1201 aaagatgctg ccatggatgg gcgctctaga ggacaacctt gatgtgttga atatgggtga
     1261 tggtgatggc aacaccggta gcaacaacga ctggggacgc gcagccacca tggatttgat
     1321 tcgctcgcgc atcaaggtta agtcgctgaa cttcatgcgt ggccgtacct ttttaaataa
     1381 attcctcatc attgacgaag cgcaaaacct tacgcccaag caaatgaaaa cactcatcac
     1441 cagggccgga ccaggcacca aggtagtgtg tctgggcaac attgcacaga tcgatacgcc
     1501 ctacctgact gaaggaagct cgggcttaac ctttgtggtt gaccgattca aaggttggcc
     1561 acacgctggc catatcaccc tgcaacgtgg cgagcgctcg cgcttggctg actacgccgg
     1621 agatgtcctg tagtggccga acaaagccgc cttgcgatca ccatgggcga cccagctggc
     1681 attggtccag agatcgttgc caagttgttc acccatggga cagccaactg catcgtctac
     1741 ggcgacgcac agtgttttga acgtgccact gagcgcctca atctcgaatt gccgctcacc
     1801 gtgctcacta gccccagtga cccattacca tcgctaggtg tacccctcat acaggcctgc
     1861 gaccccgtga cgcctgagtt aaagcttggg caaatatcat ctgaggccgg caaggctgct
     1921 taccagtgtg ttgaacgcgc gatcacggat gctttggcag gattggtagg tggcgtggtg
     1981 acagcgccct taagcaaaaa agccattgag ctggcgggat ttgatttccc aggacatacg
     2041 gaaatcttgg cgcaccgctg cggcaatgtg cccgttgcga tgatgctcgc caacgatgag
     2101 attcgcaccg tcttagtgac tatccacatc cctttatcag ctgtggcgca gaccatcacg
     2161 cagccgctcg agactcaagc gatcgagcta gcgcatcgag ggtgtgttga gctcggtatc
     2221 gcagaaccga gaattgccgt ggcaggctta aacccgcatg caagcgagtc aggtaaattt
     2281 ggggacgagg aagaacgcat cataaaacct gctattgagg cggccaaagc atctggtttc
     2341 aatgtttcag gcccgtggcc aggcgacaca attttcgggc gtgcacgcca gggtgagttc
     2401 gatgtggtgg tcgcgcaata ccacgaccag ggcttaatac ccgtaaagta cctcggactc
     2461 gatcaaggcg tgaacatcac gatcggctta ccctttgtgc gcaccagtgt cgatcatggc
     2521 accgcttttg atattgcaga acttggggtt gcaagccccg catcgttaga acaagcggtc
     2581 agcatcgcca gaaccctgat tgcccatcgt tagttcattt aattctagta gctaccacca
     2641 ccaccggtga agtttaagaa cttggtgctc tcgccctgga aggtcaaacg cactgtaccg
     2701 attgggccat tacgttgctt accaatgatg atttcggccg tacctttgtc aggcgagtct
     2761 gggttgtaca cctcgtcgcg ataaataaag agaatcacat cagcgtcttg ctcaatggca
     2821 cccgactcgc gcaagtcact catgaccggg cgtttgttgg gacgttgttc aagagaacga
     2881 tttaactgcg acaaacacac cacgggacat tcaagctctt tggccaaaga cttcagtgca
     2941 cgactgattt ctgagatttc cgtggcgcgg ttttcaccac caccacttga ggacatgagt
     3001 tggatatagt cgatcactat caaacctagg cgcccacact gacgagcca
//
LOCUS       DATBNL010000782         3505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_129195, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000782 DATBNL010000000
VERSION     DATBNL010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129195"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VIC30_13295"
     CDS             <1..235
                     /locus_tag="VIC30_13295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018027013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HEY7805391.1"
                     /translation="LPAIVNIHDVPLAKQFMQRIVGLRGGEVVFDGKPEALNNDVLTT
                     IYGAEDWTAMRKSHDEDVASENEQAAVMQQVGV"
     gene            253..1089
                     /gene="phnE"
                     /locus_tag="VIC30_13300"
     CDS             253..1089
                     /gene="phnE"
                     /locus_tag="VIC30_13300"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HEY7805392.1"
                     /translation="MANQTVTHQTMTNQTYPTAWKRPPQIFTDPLWRRIIFSGIALYL
                     FLAIGSVEVNWNRVWEGLERGQRFVAGFLVPDFSSRWTDISIGLVESLTMTLTATVVG
                     IIISVPIGIGAATNMAPKWMYLVCRSIIAVSRSLQEIIIAIFFVAMFGFGPFAGFLTL
                     SFATIGFLSKLLAEDIEDIDKSQVEAIRATGASWLQVLIYGVAPQVMPRLVGLSLYRL
                     DINFRESSVIGIVGAGGIGATLNTAIDRYEYDSAGAILLIIIGIVLVVEYSSGLIRRR
                     LQ"
     gene            1086..1931
                     /gene="phnE"
                     /locus_tag="VIC30_13305"
     CDS             1086..1931
                     /gene="phnE"
                     /locus_tag="VIC30_13305"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003804061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HEY7805393.1"
                     /translation="MSSGPNIQPSGLDPSVSLPEIWHYRTPKAKLAIWFAWLALVALF
                     VWSWQVMNANTMWVFVWDAPTQAADIASRMFPPRWSYINELWLPLWDTLNIATLGTLG
                     GIAMAVPVAFLAARNTTPSVVFVRPVALGIIVASRSINSLIWALLLVAIIGPGIFAGI
                     IAIALRSIGFIGKLLYEAIEEIDHNQVEAVSATGASSAQVMHYGIVSQVMPAFLGISV
                     FRWDINIRESTILGLVGAGGIGLQLQASLNVLAWPQVTLILVVILATVIVSEWVSAKV
                     RAALI"
     gene            complement(2023..2211)
                     /locus_tag="VIC30_13310"
     CDS             complement(2023..2211)
                     /locus_tag="VIC30_13310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805394.1"
                     /translation="MATKTRAQSPILEAVHETAKDMERHGFITKRDMAKYDLLCLKPV
                     PSYDSKTTRASSKKLTSR"
     gene            complement(2439..3233)
                     /locus_tag="VIC30_13315"
     CDS             complement(2439..3233)
                     /locus_tag="VIC30_13315"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY7805395.1"
                     /translation="MKQRSETNSVQKVCMLLRALSSPSPRRLKDLAAETGLDKASILR
                     VLETLTAEGYVTRDDTHKTFQLGDQSILLGLAMQQRLPVVHLARPFMLHVAANSGDTA
                     LLLQRMGNEAVCMDREFGGYPIRANYLEVGTRRPLGLSSGGLALLAWLPDDEIKAVLD
                     ISQATLQRNYPTISRSFIEDQVARAREQGYACVLNLLVEQMGGIAVPLFGADGRPFAS
                     IVISALARRVEERRDTLAALLQETAESFAKAHTGVDQTAMLARHCS"
BASE COUNT          733 a          854 c         1022 g          896 t
ORIGIN      
        1 tttgcccgcc attgtcaaca tccacgacgt gccactggcc aagcagttca tgcaacgtat
       61 tgtgggttta cgtggtggag aagtggtgtt tgacggcaag cccgaggcgt taaacaacga
      121 cgtcttaacc accatctatg gcgccgagga ttggacggcg atgcgcaagt cacacgacga
      181 agacgtggca agcgagaacg agcaggctgc tgtgatgcag caagtgggtg tgtagtggcg
      241 tcgagtaaag cgatggctaa tcaaactgtg acccatcaaa ccatgacaaa tcaaacctat
      301 cctaccgcct ggaagcgccc gccgcagatc tttaccgatc cgctgtggcg caggattatt
      361 tttagtggca ttgcgttgta tctcttttta gcgattggct cggttgaggt taactggaac
      421 cgtgtttggg aagggttaga gcgcggtcag cgattcgttg ctggcttttt ggtgccggac
      481 ttctcgagcc gttggaccga tatatccatt ggtctggttg aaagcctgac catgacgttg
      541 acggccacag tcgtgggtat catcattagc gtgcccattg gtattggtgc ggccacgaac
      601 atggcgccca agtggatgta cctggtatgt cggtccatca ttgccgtgtc gcggtctttg
      661 caggaaatca tcatcgcgat cttttttgtg gcgatgtttg ggtttgggcc atttgcaggg
      721 tttctgacgt tgtcgtttgc caccatcggg tttttgtcca agctgctggc cgaagacatt
      781 gaagacatcg acaagtcaca agttgaagcg attcgcgcaa ccggcgcatc ttggttgcag
      841 gtgttgattt acggtgtggc accacaagtc atgccacgct tggtgggttt gtcgctgtac
      901 cggttggata tcaatttccg ggaaagctcg gtcattggca ttgtgggtgc cggtggtatt
      961 ggtgcaacgt taaacaccgc catcgatcgt tatgaatacg acagcgctgg tgccatcttg
     1021 ctcatcatca tcggcatcgt gttggtggtg gagtattcct ccgggttgat ccgcaggagg
     1081 ctgcaatgag tagcggtcct aacattcagc catcaggtct agacccatcg gtgagcctgc
     1141 ctgagatctg gcactaccgt acgccgaaag ccaagttagc aatctggttc gcatggttgg
     1201 ccttagtcgc tttgtttgtg tggtcctggc aggtcatgaa cgccaacacc atgtgggtgt
     1261 ttgtctggga tgcgccaacg caagctgccg acattgccag ccggatgttt ccaccacgat
     1321 ggagttacat caacgagttg tggttgccgt tgtgggatac gttgaacatc gccaccttag
     1381 gtaccttggg tggtattgcc atggctgtgc ccgtggcgtt tttagccgca cgcaatacca
     1441 cgccatcggt tgtgttcgtg cgaccagtgg ctctgggcat catcgtcgcg tcgcggtcca
     1501 ttaattcgtt gatttgggca ttgctgctcg tggccatcat tgggccaggg atttttgcgg
     1561 ggatcattgc cattgcattg agatccatcg gttttattgg caagttgctc tatgaggcca
     1621 ttgaagagat cgatcacaac caggtcgagg ccgtcagtgc gactggggcg tcgtcagccc
     1681 aggtcatgca ttacggcatc gtctcgcaag tgatgcccgc gtttctgggg atctcggtat
     1741 ttcgctggga catcaacatt cgcgaaagca ccatccttgg cctcgtaggg gcagggggta
     1801 taggccttca gttgcaggct tcgttgaatg ttctagcttg gccacaggtg acgttgattc
     1861 tggtggtgat tctggccacg gtgattgtga gcgagtgggt ctcagccaag gtgcgcgcgg
     1921 cgttgatttg atggtgctga gtcaatgagg caccggaaac tacgctacca gttaacgcga
     1981 ggtaacgcga ggcagggcta caagttaggc tacagggtag gtctaacgac ttgtcaactt
     2041 cttgctcgat gctcgagttg tcttgctgtc ataagaaggt acaggcttaa gacacaacaa
     2101 gtcgtatttg gccatgtcgc gtttggtgat aaagccatgc ctttccatat ctttggcggt
     2161 ttcatgtact gcctcgagaa tcgggctttg ggcgcgggtt ttggtggcca tgatttagtg
     2221 tccgtttttg agtcatcgat ccgtaacatc ggctcgatcg agagggatgc attgtgacat
     2281 ggttgtgaca tgggctggac gtggtcttga catcagccgc caggaaaaac cgagattgcc
     2341 tcagaagtgg caatcatcca accagcgatc ctatgaaacc acatgttggt cgtaaagaag
     2401 cgttcaggcg atgcggccca agcttgtggc taccgctatc aactgcagtg gcgcgccagc
     2461 atggcagttt gatccacacc cgtgtgtgcc ttggcaaatg actcggctgt ctcttgaagg
     2521 agagcggcaa gcgtgtctcg tcgttcttcg acgcgcctag ccagtgccga gatcacgata
     2581 gaggcaaaag gtcggccatc ggcgccaaac agaggcacag cgatgccacc catttgttca
     2641 acaagcagat tcaacacgca agcgtagcct tgctctcggg cgcgtgcgac ttggtcctca
     2701 atgaagctgc ggctaatggt ggggtagttg cgttgcaagg tcgcttgact gatgtcgagc
     2761 acggctttga tttcgtcatc aggtaaccac gccagcaatg ccaagccacc cgaacttaaa
     2821 ccgagcgggc ggcgcgtgcc gacttcaaga tagttggcac gaatcggata gccaccaaac
     2881 tcacgatcca tgcacaccgc ttcgttaccc atgcgttgca gcagtaaagc ggtatcgcca
     2941 ctgttggcag cgacatgcag catgaaaggg cgtgctaagt gcaccacggg caggcgctgt
     3001 tgcatggcta gacctagcaa gatcgactgg tcgccgagtt ggaaggtttt gtgggtgtca
     3061 tcgcgcgtga cgtaaccctc ggcagtcagt gtctcaagca cacgcaaaat gctggctttg
     3121 tctagccccg tttcggcagc gaggtctttg agccggcgtg gtgacgggct agacaaagcc
     3181 cgcaatagca tgcagacctt ttgcacggaa ttggtttcag agcgttgttt catgttgcgc
     3241 ctactttttc gtatgacaaa ctatagagtt gatgacacaa gtgggttatt cgtcgcaaag
     3301 ccgactcatg ccatgcttta tagaaacctc tgaagtatct tttagctcgg cgaaggcgct
     3361 gtcaagtact tgtcgcacga aatttcgtca aacaaacctt tctaatggtt agtgctaata
     3421 gcagacgtct ccaatgtggc gagcgcattc ccgtacacgt attcccatgc actgatgggc
     3481 gttttggtct ttcggttgtc taaaa
//
LOCUS       DATBNL010000783         2105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_129203, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000783 DATBNL010000000
VERSION     DATBNL010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129203"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VIC30_13320"
     CDS             <1..393
                     /locus_tag="VIC30_13320"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814951.1"
                     /note="an AccC homodimer forms the biotin carboxylase
                     subunit of the acetyl CoA carboxylase, an enzyme that
                     catalyzes the formation of malonyl-CoA, which in turn
                     controls the rate of fatty acid metabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY7805396.1"
                     /translation="EPFTLRQRDIEFKGHAIECRINAEDPFKFVPSPGRITNWHTPGG
                     PGVRIDSHVFNGYFVPPHYDSMIAKVITYGDTRDQAIARMRIALSEMVVEGISTNIAL
                     HRELLADARFVAGGTSIHYLEHKLAERS"
     gene            420..1325
                     /gene="prmA"
                     /locus_tag="VIC30_13325"
     CDS             420..1325
                     /gene="prmA"
                     /locus_tag="VIC30_13325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008165196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEY7805397.1"
                     /translation="MRELVLQCPGEHADSLTDALIEAGALSACAEDADLDTPAERPMF
                     GEPGSDASPVGWESNRVVALLPDGLDATELLAQAQTQLPFAIGDHWQLREVPDQDWVK
                     LTQSQFEPIAVGQRLLIVPTWHREQWQTDERVCLELDPGLAFGTGSHPTTHLCLKLLQ
                     TDMPQDCHLLDYGCGSGILAIAAKLLGAHQVVGVDIDEQAVQSTEYNALANGVAIKAM
                     LPDDLPEGEFDVVMANILSNPLKVLAPMLSHRVRPGGHLVLSGVLERQADEVAAAYAP
                     WLVMTVYESLDGWVCLAGQRPQERS"
     gene            1322..>2105
                     /locus_tag="VIC30_13330"
     CDS             1322..>2105
                     /locus_tag="VIC30_13330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008115501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HEY7805398.1"
                     /translation="MSLVTQCPKCASEYEVTADQLKLHDGLVRCGQCSNVFDGLACLK
                     DSLPTLTRKAADTQKVVAPDDIAATDNLSSSQLSSDSHLAPLLDVRADSDSPEDTPVA
                     APPASPAPTEPSPPSWQEPLVKPISPVPTPAPTPAPAPTFTTSLADDKPAKPVDDGPF
                     IPSVDRIAHNRPQVPGRQEPSLVSRSAWSGAPKTGAEPGFSKTAGAASVSSATAPTSA
                     REPILGSLLANDGEQPGVGSQAEPTVKVMGESRLRGDDPSAAG"
BASE COUNT          442 a          582 c          617 g          464 t
ORIGIN      
        1 gaacccttta cgctcagaca gcgtgacatt gagttcaaag gccatgccat cgagtgccgt
       61 atcaacgccg aagatccctt taagttcgtg ccaagtcccg gccgaattac caattggcac
      121 acgccgggtg gtcctggcgt gcggatcgat tcgcatgtct ttaacggcta ctttgtgcca
      181 ccgcactatg actcgatgat cgccaaagtt atcacttacg gtgatactcg ggatcaagcg
      241 attgctcgta tgcgcatcgc cttatctgaa atggtggtcg agggcatcag caccaacatc
      301 gcgttacatc gcgagttgtt ggctgacgcc cggtttgtgg ctggtggtac gagcattcat
      361 tatctggagc ataagcttgc cgagcgttcc taggactgct ggctggcggg ggtgaggttg
      421 tgcgagagct ggtattgcaa tgtccgggcg aacatgccga cagtttgact gacgcgctga
      481 ttgaggctgg cgcattgtct gcttgtgcag aggatgctga cctcgatacg cctgccgagc
      541 gcccgatgtt tggggagccc ggaagtgacg cctcgcctgt gggttgggaa agcaatcgtg
      601 tggtggccct gttgcctgat gggttggatg ctactgagct tttggcgcaa gcccagacgc
      661 aattgccgtt tgccatcggt gaccattggc agttgcgcga ggtgcctgac caagattggg
      721 tcaagctgac gcagtcgcag tttgaaccaa ttgcagttgg ccaacggctc ttgattgtgc
      781 caacctggca ccgtgagcag tggcagaccg acgagcgggt ctgcttggag ctcgaccccg
      841 gtctggcctt cggtacaggc agtcatccaa ccacccattt atgtctgaag ttgttgcaaa
      901 ctgacatgcc acaggactgt catttgcttg actatggctg cggctcaggg attctggcca
      961 ttgcagccaa gttgctcggt gcacaccagg tggtcggtgt agacattgat gaacaagccg
     1021 ttcaatcaac cgaatacaac gcattggcca acggggttgc cataaaggcc atgttgcccg
     1081 atgacttacc cgagggcgag tttgatgtgg tgatggccaa tattttgtcg aaccccctta
     1141 aggtgttggc acccatgctc agtcaccggg ttcgaccggg tggtcatctg gtgctctcag
     1201 gtgtcctaga acgacaagca gacgaagttg cagctgctta cgcgccatgg cttgtcatga
     1261 cggtgtatga gtcgctagac ggctgggtgt gcctagccgg acagcgcccg caggaacggt
     1321 catgagtcta gtgacacaat gtccaaaatg cgcgagcgag tatgaggtca cagccgatca
     1381 actcaagctt cacgacgggc tcgtgcgttg tggtcagtgt tccaacgtct ttgacggact
     1441 ggcttgtctg aaagacagtc ttcccacatt gacacgcaag gccgccgaca cgcaaaaggt
     1501 agtagcgccc gatgacatcg cggcaactga caacctttca agtagtcaac tttcaagcga
     1561 tagccatcta gcgccactgc tcgatgtgcg tgctgacagt gattcccccg aagacacccc
     1621 cgttgcggcg ccacctgcgt cgcccgcacc aaccgaaccg tcgccaccat catggcagga
     1681 accgttagtt aagccgattt ctccagtacc gacgcctgca cctacaccgg caccggcacc
     1741 gacgtttaca accagtttgg ctgatgacaa gcccgctaag ccagttgatg acggtccatt
     1801 catacccagc gtggatcgaa tcgcgcacaa cagaccacaa gtgccaggac gccaggagcc
     1861 tagtttggtg tcacgctcag cctggtcagg tgcaccaaag actggcgctg agccgggttt
     1921 ttctaagaca gctggcgctg catcggtatc aagcgcgacc gctccaacga gcgcgcgcga
     1981 accgatctta ggctcgttgt tagccaacga tggtgagcag ccgggcgtgg gctcacaggc
     2041 tgaacccact gttaaagtca tgggggagtc gcgcctgcgt ggtgatgacc catcggctgc
     2101 aggtc
//
LOCUS       DATBNL010000784         7236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_129217, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000784 DATBNL010000000
VERSION     DATBNL010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7236
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129217"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..881
                     /locus_tag="VIC30_13335"
     CDS             297..881
                     /locus_tag="VIC30_13335"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY7805399.1"
                     /translation="MASSYESPAAFHIRPIQAADLWTLKTFLCELSPGTLYFRFGRLS
                     VPMWTEQEWIRLCSPDAERFAHFVATAPSEPGRYAIVGMGRLVCEAGDQQSAEFSIVV
                     ADHLQHQGLGTKLIHALVGEARRRALRSMYGDVLPSNQAMIRFCKGLGFVSHRCPDDE
                     RIHRMVLSIKSKQSEKNVADTSKPLKQLAAQYVS"
     gene            1041..3197
                     /gene="katG"
                     /locus_tag="VIC30_13340"
     CDS             1041..3197
                     /gene="katG"
                     /locus_tag="VIC30_13340"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011546991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HEY7805400.1"
                     /translation="MLDTVKCPVMHGAMTETGSSVMDWWPKSLNLDILHQHDSKTNPM
                     DPDFNYREEVKKLDVKALKADLEALMTDSQAWWPADWGHYGGLMIRLAWHAAGTYRIA
                     DGRGGAGTGAQRFAPLNSWPDNGNLDKGRRLLWPIKKKYGNQLSWADLFILAGNVAYE
                     SMGFKTFGYSFGREDIWHPEKDIFWGGESEWLGENRYPSKEDRESLENPLAAVQMGLI
                     YVNPEGVGGQPDPLRSAHDVRLTFARMAMNDEETVALTAGGHTVGKAHGNGDAANLGP
                     DPEGAPIEEQGLGWINHKTRGIGRDTVTSGIEGAWTTHPTKWDNGYFHLLLNYEWELT
                     KSPAGAWQWKPVDIKEEDMPVDVEDSSIRCMPMMTDADMAMKMDPEYRKISERFYKDP
                     EYFGEVFARAWFKLTHRDMGPKARYIGPEVPQEDMIWQDPVPAGNASYDVNAVKAKIA
                     ASGLSTEEMVATAWDSARTFRGSDFRGGANGARIRLAPQKDWEGNEPARLAKVLKVLE
                     GIASETGASVADVIVLAGNVGVEQAAKAAGVEVNVPFHPGRGDATQEMTDVDSFAGLE
                     PVHDAFRNYVKKDYAVQPEEMMLDRAQLMGLSAKEMTVLVGGMRVLGTNFGGTKHGVF
                     TDRVGALSNDFFVNLTDMANSWKPTGKNSYDIVDRASGNTKFTATRVDLVFGSNSVLR
                     SYAELYAQDDSKEKFVKDFVAAWTKVMNADRYDLKA"
     gene            complement(3361..4710)
                     /locus_tag="VIC30_13345"
     CDS             complement(3361..4710)
                     /locus_tag="VIC30_13345"
                     /inference="COORDINATES: protein motif:HMM:NF014999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF234 domain-containing protein"
                     /protein_id="HEY7805401.1"
                     /translation="MQVPDSDERDVVGVFADALSVTDRPLPDGIDASQLSRFTDMVRV
                     IGILCRAGWVVILDEFQYFNRKTMYSFTSLLQAEVDSLIGTEKGGIFVLGSIHTEMTA
                     LLEDRSSPLYARVTDRMTLEHWDFATLFEVFEDQSISKPNDWLSLWGLFEGVPKFYRD
                     CVSQGVFSQTSDSEPIGSRAVQALFFSPTAPLLEEAATWFARELRGGSVSVLRMLSQQ
                     QPCIHQQLSDAYQQSTGDHKPISNYLNVLIDRYRLIERQHPVFSRTTGSRQARYLISD
                     NFLAAWLAAIEPGIQASRVQPLERALSITQEKLATHEGHVFERMIRKLMVDASRHGVG
                     DFSLTELVTGYWNRPRDADRLIEIDILAINEAEKIVRFGSCKRSAVKHDRSSLLKTEQ
                     HISDFLRTSTGKRFNGWTMQRALYAPCFDALQRQKLQQCGWICVDLLDYQNWFRQSA"
     gene            5261..5935
                     /locus_tag="VIC30_13350"
     CDS             5261..5935
                     /locus_tag="VIC30_13350"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEY7805402.1"
                     /translation="MSTQIDLVHALENRRSIRGFKPDPIAPTVIREILTLANRSPSFT
                     NSQPWEVAVVTGKTRDALSKILLELATSNAESNPDLASPTSWPDNIATRTKTHNIKRF
                     EHLGIGREDVEKRTQMRLKNYHFFDAPCALFVFKDEGCGEWSTMDIGGFTQSIALAAQ
                     AYGLGTCMQASLTYYPDAVRAALDIPASKKLLVGMSIGVPDLEAPLNAYHSARMELEE
                     FVRWYD"
     gene            complement(6009..6704)
                     /locus_tag="VIC30_13355"
     CDS             complement(6009..6704)
                     /locus_tag="VIC30_13355"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7805403.1"
                     /translation="MDTQLTIAVVEDHNDLREAMVEALVNQGHQVAALCDAEQFVVAA
                     AGQSFDLVIVDLNLPGEDGMSLTKRLRKQDPKLGLVIVSARGLVQEKTQGYESGADIF
                     LTKPVALQELVAAVRSLGQRIRAPEARANVRAHLNFAQLELTGTDGTTVMLSWHEAVL
                     LRALILSKERQLDSWQLMEAMGKNTQAYSKSALELVVLRLRKRMQSVGFDANVITAIR
                     NKGYMLLVEVDVT"
     gene            complement(6689..>7236)
                     /locus_tag="VIC30_13360"
     CDS             complement(6689..>7236)
                     /locus_tag="VIC30_13360"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805404.1"
                     /translation="VVQQQRLHRSLDTMSAVIDRCRLSLQLDEGRLEPKLESIDISAA
                     VHDLVLTCKDPDRVVFAGDGPGLAHTDRQLFLVILHNLLDNAVKYSPEGSIVTVSTRA
                     CEERGSPGICVTVENRFTRRPAATPETLFEKYFRGINATGQTGSGLGLHLSRRLTTII
                     NGHLWAELGSDDIKLCLWIPN"
BASE COUNT         1830 a         1970 c         1783 g         1653 t
ORIGIN      
        1 tggccagacg tcgtttcttt taatgcgcta tctgctacac gacgggtagg agaccatcac
       61 ccggggtaca gtttgcagga ggttgtactc gcttgacccc taggccaagc caaagcgcag
      121 cttagctaaa gtgcttgtca agaccgcaaa gaatcgaata cccaaaacaa gaacatttat
      181 cagggtttac cctcagtgtt taaccattgt tgatttagcg taacaaaagt gtggcaaggt
      241 ttgattaagg tgaagtctgt aacgcgtcat acctttaatt catgcgagac gttccaatgg
      301 caagctctta cgaatcgccc gccgcctttc atatccgacc catacaggcc gccgaccttt
      361 ggacacttaa gactttttta tgtgagttgt ctcctggcac cctctatttc cggtttggcc
      421 gtcttagcgt accgatgtgg acagaacagg aatggatccg cttgtgctca cctgacgcgg
      481 agcgtttcgc tcatttcgtg gccactgcgc ctagcgaacc tggccgctac gccatcgtcg
      541 gcatgggccg cctggtgtgc gaagccggcg accaacaaag cgctgagttc agcattgtgg
      601 tagctgacca tctgcagcat caaggtctag gaaccaaatt gattcatgcg cttgtcggtg
      661 aggcgcgtcg tcgagcactg cgctcgatgt acggtgatgt attgccaagt aaccaagcaa
      721 tgataagatt ctgcaaaggg ttagggtttg tgtctcaccg ctgcccagat gacgagcgta
      781 ttcatcggat ggtactcagt atcaaatcaa agcaatcaga aaaaaatgtg gcagacacca
      841 gcaaacccct gaagcagcta gcggctcaat atgtcagcta ggtgcatgaa tctaaacgta
      901 atcgtggtct tgtaggtgtt tatgtcacga tcgtgacttg tgcgtgaatg gcacctatca
      961 tcgatttagt tataaacaat tagtatcagc taactgatta gcctaaacta actcttgcta
     1021 ttcaaataaa ggagtgaaac atgctagata ccgtcaaatg cccggtgatg cacggtgcca
     1081 tgaccgagac tggttcgtca gtcatggact ggtggcccaa atcactgaat ctggacatcc
     1141 tgcaccagca tgacagcaaa accaatccca tggatcctga cttcaactac cgtgaagaag
     1201 tcaagaaact cgacgttaaa gcactgaaag ccgacctcga agcattgatg accgacagcc
     1261 aggcttggtg gcctgccgac tggggtcact acggtggttt gatgattcgt ctggcatggc
     1321 acgctgctgg tacctaccgt atcgctgatg gccgtggcgg tgctggcacg ggcgctcagc
     1381 gtttcgcgcc actgaactcc tggcctgaca acggcaacct cgacaaaggt cgtcgtctgc
     1441 tgtggcccat caagaaaaaa tatggcaacc aactgagctg ggctgacttg ttcatcctcg
     1501 ccggtaatgt cgcctatgaa tccatgggct ttaagacatt tggttactcc ttcggtcgcg
     1561 aagacatctg gcatcctgag aaggatatct tctggggtgg cgaaagcgaa tggcttggcg
     1621 agaaccgcta tccttccaag gaagatcgcg agtcactcga gaacccgctg gccgctgtgc
     1681 agatgggtct gatttacgtc aaccctgaag gtgtgggcgg acagcctgac ccattgcgtt
     1741 cagcacatga cgtacgcttg acgtttgctc gtatggccat gaacgatgaa gagaccgttg
     1801 cgttgaccgc tggtggtcac accgtcggca aagcacacgg caatggcgat gcagctaacc
     1861 tgggtcctga cccagaaggc gcaccaatcg aagagcaagg cttgggctgg atcaaccaca
     1921 agacccgtgg cattggtcgc gacacagtga caagcggtat cgaaggcgca tggaccacgc
     1981 acccaaccaa gtgggacaat ggttacttcc acctgctgtt gaactacgag tgggaattga
     2041 ccaagagccc agcaggcgca tggcagtgga agcccgtgga catcaaagaa gaagacatgc
     2101 cagttgacgt ggaagattcg tccattcgct gtatgccgat gatgaccgac gctgacatgg
     2161 ccatgaaaat ggatccggaa tatcgcaaga tttccgagcg tttctacaaa gatcctgagt
     2221 acttcggcga agtctttgca cgtgcctggt tcaaactcac gcaccgtgac atgggcccga
     2281 aagcacgcta catcggaccg gaagtgcctc aagaagacat gatttggcaa gatcccgtcc
     2341 cagccggcaa cgccagctat gacgtcaacg ctgtcaaagc caagatcgct gcgagtggcc
     2401 tgtcaaccga agaaatggtt gctaccgcct gggatagcgc ccgtaccttc cgtggttcag
     2461 acttccgcgg tggtgccaat ggtgcccgta ttcgtttggc tccccagaaa gattgggaag
     2521 gcaacgagcc cgcacgactg gccaaggtcc tgaaagtgct cgaaggcatt gccagcgaga
     2581 caggcgccag cgttgctgac gtgatcgtat tggcgggtaa cgtcggtgtc gagcaggctg
     2641 ccaaagcagc tggcgtcgaa gtcaacgtgc ctttccatcc aggccgtggt gatgccactc
     2701 aggaaatgac tgacgtggac tcatttgctg gtctggagcc tgtgcacgac gcattccgca
     2761 actacgtcaa gaaagactat gctgtccaac ccgaagagat gatgctcgat cgcgcacagc
     2821 tcatgggtct gtcagccaag gaaatgacgg ttctggttgg tggtatgcgt gtcttgggca
     2881 ccaacttcgg tggcaccaag cacggcgtgt tcaccgatcg cgtcggcgct ttgagcaacg
     2941 acttcttcgt taacttgacg gacatggcca acagctggaa gcccacgggc aaaaacagct
     3001 atgacatcgt tgatcgtgct agcggcaaca ccaagtttac ggctacccgt gttgacctgg
     3061 tgttcggttc aaactcagtc ttgcgttcgt atgctgagct gtatgctcag gacgacagca
     3121 aagagaagtt cgtcaaggac ttcgtggctg cctggaccaa ggtgatgaac gctgatcgtt
     3181 atgatctgaa agcctaaatc gtaaacagga tgtgcccggc gaatcgctgg gcactgacta
     3241 acagacccga ccgcgccaca agccggtcgg gttttttttt agaacggtgc ttaattaacc
     3301 gcaggcttct atctattttc aataacagtt cttgaacagt tctgatacgt cagcgattga
     3361 ttaagcgctt tggcgaaacc aattctggta gtcgagcaga tcaacgcaga tccagccaca
     3421 ttgctgtagt ttttggcgtt gcagtgcatc aaaacatggc gcatataacg cccgctgcat
     3481 tgtccagcca ttgaagcgct tacctgtact cgtgcgcaaa aagtcagaga tgtgttgttc
     3541 agtcttaagc agtgagctcc gatcatgttt gacggccgag cgtttacagc tgccaaagcg
     3601 cacgatcttt tcagcctcat tgatggccaa aatatcaatt tcgattaacc gatcagcgtc
     3661 gcgtggccgg ttccagtagc ccgtaaccag ttccgtgagc gaaaaatcgc ccacgccatg
     3721 gcgtgatgcg tccaccatca gtttgcgtat cattcgttca aatacatgcc cctcatgcgt
     3781 ggcaagcttt tcttgcgtga tacttaacgc acgctctaac ggctgcacac gtgatgcctg
     3841 aatgccaggc tcaatcgccg ccaaccaagc ggccaagaaa ttgtcactga tcaggtatcg
     3901 tgcctgccgg ctaccagtgg tccggctaaa tacgggatgc tgacgctcga ttaaccgata
     3961 gcgatcgatc agtacattca aatagtttga tatcggtttg tgatcacccg tactttgctg
     4021 ataggcatcg cttaactgct gatgaataca cggctgctgc tgtgacagca tcctcagcac
     4081 cgagacgctt ccaccgcgta attcacgcgc gaaccacgtc gcggcctcct ctaacaacgg
     4141 tgctgtcggt gaaaaaaaca aagcttggac ggcacgcgat cctatcggct cactgtccga
     4201 tgtctgacta aaaacaccct gactgacgca gtccctataa aacttaggga caccttcaaa
     4261 aagcccccaa agactaagcc agtcattagg cttgctaatc gactgatctt caaagacctc
     4321 aaagagagtc gcaaaatccc aatgctccag cgtcattcga tcggtaaccc gtgcataaag
     4381 tggagagcta cgatcctcca acaacgctgt catttccgtg tgaatagagc ccagaacaaa
     4441 gattccgccc ttttcggtgc cgataaggct atctacctcg gcttgcagta gtgatgtaaa
     4501 tgagtacatc gtctttcgat tgaaatactg aaactcatca agaatgacca cccaacccgc
     4561 gcggcacagg atgccaatca cgcgcaccat atcggtaaat cgactcaatt gactggcgtc
     4621 aataccatcg ggcaacggcc gatcagtcac agacagcgcg tcggcaaaca caccaacaac
     4681 atcacgctca tcactatctg gtacttgcat gtagatagcc ccatgaacac gaggtgtcga
     4741 gtcaagcgcc tctcgaatga gtgatgtctt accaatgcgg cggcgtccgc tgatcgcaca
     4801 aaaaaaccac tgctgcctga acagcaagtt tttaatcgct tggcactccg cctgacgtcc
     4861 gtaaaatttc cacatttcat ttaagaataa aaagttattg ttaacttaat ttaacaattt
     4921 accttatttt tatcaattat ttataagtat attttttagg cacatctgcc gtcaatcaac
     4981 caattttggt ttcgaagcaa acctcacaaa acaacgaaac aagacaatca cgtaagtcaa
     5041 tcggtagatg gttcatgctt tctcgtgaga gtcgtggctg tcacaggaaa agtgtgctta
     5101 gccattcaag acactgcgca acaccaccga gtgattcttt ccgtcaaaat atccctgctt
     5161 agccactcag tggtcacact gctgacaccg cggcacaaac agcaaacacc aatcaaaccg
     5221 tccaaacggt tcaaacacac catcatcacg gagaccttcg atgtctactc aaatcgatct
     5281 ggttcatgcc ctagaaaacc gacgtagcat ccgaggtttt aagcctgacc ccatcgctcc
     5341 cactgtcatc cgtgagatcc tcacactggc caaccgcagt ccgtcattta ccaactcgca
     5401 gccgtgggaa gtggccgtgg tcaccggtaa aacccgagat gccttaagca agatcttgct
     5461 cgagcttgcc acgagcaacg ccgagtccaa tcccgatctg gcctcgccga catcatggcc
     5521 agacaatatc gctacccgca ccaagacaca caacatcaaa cgtttcgaac acttgggcat
     5581 tggtcgtgag gatgtagaaa agcggaccca aatgcgctta aagaactatc acttctttga
     5641 tgcaccttgt gccttgttcg tctttaaaga tgaagggtgt ggcgaatggt ctaccatgga
     5701 catcggtggc ttcacgcagt cgattgcact ggccgcacaa gcctatggct tgggcacctg
     5761 catgcaagcg tcactcacct actaccctga tgcggtacgc gccgcacttg atattccagc
     5821 atctaagaag ctgctcgtgg gcatgtctat tggcgtgcct gatttggagg cgccattaaa
     5881 tgcgtatcac agtgccagga tggagctaga agaattcgtg cgttggtacg attgacgcaa
     5941 ggcatgacgc gccaatgtcg agtgcgctaa acacactaga cacgctacac acgctacgcg
     6001 accttgcatc aagtcacatc tacttcaacc aagagcatgt aacctttatt acggatcgcc
     6061 gtgatcacat tggcgtcaaa tcccacgctt tgcatgcgtt tgcgcaagcg caacactact
     6121 agctccaacg ccgatttgga atacgcttgg gtatttttac ccatggcctc catcaactgc
     6181 caagagtcga gttgccgttc cttggacagg atcaacgccc gcaacagcac ggcttcgtgc
     6241 caggacagca tcacagttgt tccatccgtc cccgtgagct caagctgcgc gaaattcaaa
     6301 tgcgcgcgca catttgccct tgcctcaggc gccctaatcc gctgcccaag tgaccgaact
     6361 gccgccacga gctcctgcaa cgccacaggc ttggtcagga agatatctgc accactctca
     6421 tagccctggg ttttttcttg gacgagtcct ctggccgaga caatcaccaa acctagcttt
     6481 ggatcctgct tgcgcagacg cttggttaat gacataccgt cttcacctgg taggttcaga
     6541 tccacaatca ccagatcaaa ggattgccca gctgctgcga ctacgaactg ctcggcatcg
     6601 cacaaggccg cgacttgatg tccttggtta acaagtgcct caaccatggc ctcacgtaag
     6661 tcgttgtggt cttcaaccac tgctatcgtt aattgggtat ccataaacac agtttgatgt
     6721 cgtcagagcc aagctcagcc cataaatgac cgttaataat ggttgtcaaa cgtcggctta
     6781 agtgcagacc gaggcccgag ccggtttggc ccgtggcatt gatgccacgg aaatactttt
     6841 caaataacgt ctcgggcgtg gctgctggac gacgcgtaaa acggttctcc accgtgacac
     6901 aaatgccagg actgccgcgc tcctcacagg cgcgcgtcga taccgtgaca atcgaacctt
     6961 caggtgaata cttcaccgca ttgtccaaca gattgtgcag aatcactaaa aacagttgcc
     7021 ggtcggtgtg ggctaggccc gggccatcac ctgcaaatac aacccggtca ggatctttac
     7081 aagtcagcac cagatcatgc actgccgcag agatatcaat cgattccagc ttaggttcta
     7141 gccggccttc atctaattgc agtgatagac gacaacggtc aataaccgct gacatcgtat
     7201 ccaaggatcg gtgcaagcgt tgctgctgca ccacta
//
LOCUS       DATBNL010000785         4139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_9118, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000785 DATBNL010000000
VERSION     DATBNL010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4139
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9118"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VIC30_13365"
     CDS             complement(<1..203)
                     /locus_tag="VIC30_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010928645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805405.1"
                     /translation="MRQSNKSETFVPLTAAQLKTRAVRWLAAREHTRGELARKLKPYT
                     DNPEDIETVLDDLEREGWQSDAR"
     gene            complement(187..1344)
                     /gene="recA"
                     /locus_tag="VIC30_13370"
     CDS             complement(187..1344)
                     /gene="recA"
                     /locus_tag="VIC30_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014007780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEY7805406.1"
                     /translation="MDDKVSKQAASDKAKALAAALSQIEKQFGKGSVMRYGDNQVEHD
                     VRVVSSGSLGLDIALGVGGLPRGRVVEVYGPESSGKTTLTLQVIAEMQKIGGTAAFID
                     AEHALDVQYAQRLGVNLTDLLISQPDTGEQALEITDALVRSGSVDLIVIDSVAALTPK
                     AEIEGDMGDSLPGLQARLMSQALRKLTATIKRTNCMVIFINQIRMKIGVMFGNPETTT
                     GGNALKFYSSVRLDIRRIGAIKKADEVVGNETRVKVVKNKVAPPFKQAEFDIMYGAGI
                     SREGEIIDLGVQASIVDKSGSWFSYNGNRIGQGKDNVREYLKEHTEMANEIENRVREH
                     FGVKPREGTVPAAGKSAGKAAEKATDKATDKATDKAADTVTAADQSDAPEQ"
     gene            1825..2565
                     /locus_tag="VIC30_13375"
     CDS             1825..2565
                     /locus_tag="VIC30_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY7805407.1"
                     /translation="MRILIAEDDSLLADALTQSLRQSGYAVDAVSDGMAADTVLRSQE
                     FDLLILDLGLPRMSGLEVLQSLRNQNSRLPVLILTAADSVDQRVKGLDLGADDYMAKP
                     FALSELEARVRALTRRGAGGGSTLLKHGRLVFDQTGRVASVDDVALELSAREVSLLEI
                     LLTRAGRMVNKSQIVDHLCQWGEEVSSNAIEVYVHRLRKKLEPSGVRIATVRGLGYCL
                     QRDPNEGNSNSTDNHHTGTTNNNQSSAG"
     gene            2601..>4139
                     /locus_tag="VIC30_13380"
     CDS             2601..>4139
                     /locus_tag="VIC30_13380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005013563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805408.1"
                     /translation="MAANPPDRLQPASSELSGDSALGPTGAATGGTTGATSGAATSAR
                     TPNGNSNGAYSRSLLGEILDWMLAPLFLLWPMSVAITYVVAQDIANTSYDRNLRNALS
                     VLSEQIEWPNGETGVPILPLNPLTKVALRTYDSEGVFWKAQVVLYTGQGQVEGPVIGG
                     DDALPSPKLNYEDVRPGRVMYKDQTLSGFEVRLAYQWAQNPRFPTDDLVLLVVAEGRE
                     PRVALANEIIKGVIIPQFLVLPVAVLLIWFGLSRGVAPINALQRRLRARRPDDLSAIE
                     EDATPAEITPLVTAMNDLLTRLSGNIEAQRRFVADAAHQLKTPLSGLRLQAEIALKSA
                     TNPETEENLHKIVAGTERATRLINQLLLMASAENPDHVQLVPVNLTALARQVTEDWVE
                     QALARGVDLGFESNEDNAMIRGQSLLLSEALNNLIDNALRYAPYSGQVTVSVQASPTE
                     VALHVLDNGPGISPEERDRIFDRFYRVLGTQTHGSGLGLAIVKEIAQKHQAWLTVDTA
                     HPDQI"
BASE COUNT          934 a         1203 c         1065 g          937 t
ORIGIN      
        1 tagcgggcat cggattgcca gccttcgcgc tcgagatcat caagcacggt ttcaatgtct
       61 tctgggttgt cagtgtaggg tttgagcttg cgggcaagct caccacgggt gtgttcgcgc
      121 gcagctagcc aacgcactgc acgcgttttc agttgcgccg cggtcagcgg cacaaacgtc
      181 tcggacttat tgctctggcg catccgattg atcagcggcg gttaccgtgt cggctgcttt
      241 gtcagtggct ttgtcagtgg ccttatcggt cgccttctca gctgccttac ccgcagactt
      301 gccagccgct ggcaccgtac cctcgcgagg cttgaccccg aaatgctcgc gcacccggtt
      361 ctcgatctcg ttggccatct cggtatgctc tttcaggtac tcacgcacat tgtccttgcc
      421 ctggccaatg cgattgccgt tgtaactgaa ccaagagcct gacttgtcca cgatactggc
      481 ctgcacacca aggtcaatga tttcaccttc acgtgagata cccgcgccgt acatgatgtc
      541 aaactcggcc tgcttaaagg gtggtgcgac tttgttttta acgactttga cgcgcgtctc
      601 gttaccaacc acctcatcgg ctttcttgat cgcaccgata cgacgaatat ctaagcgcac
      661 cgacgagtag aacttcaacg cattaccacc ggtggtggtc tcggggttgc cgaacatcac
      721 gccaatcttc atacggatct ggttaatgaa gatcaccata cagttggtgc gtttaatggt
      781 ggcggtgagt tttcttaagg cttggctcat caagcgcgcc tgcagacccg gcaatgaatc
      841 gcccatgtca ccttcgattt ctgctttggg tgtcaatgca gccaccgagt caatcacgat
      901 caagtcaacc gagcctgaac gcaccagcgc gtctgtgatt tccagcgcct gctcacccgt
      961 gtctggctgt gaaatcaaaa gatccgttaa gttcacaccc aagcgctgtg cgtactgcac
     1021 atccaaggca tgctcagcat cgataaacgc ggcggtgcca ccaatctttt gcatctcggc
     1081 gatcacttgt agcgtcaaag tcgtcttacc ggaagattcc ggaccgtaga cctcaacaac
     1141 gcgtccgcgt ggcaagccac caacgccaag tgcgatatca agaccaagcg aaccagatga
     1201 aaccacgcgc acgtcatgct cgacttgatt gtcgccataa cgcatgactg aacccttgcc
     1261 gaactgcttt tctatttgtg acagtgcggc ggccaaggcc ttggctttgt cagaagcggc
     1321 ttgtttgctt actttgtcgt ccatgttatt ccttgcgata taagaaagtt gctactgaga
     1381 gccggccatc ggcattgttt gaacattgtt tgaatcttgc tctagtgcaa tgcaactggc
     1441 catgcatgcc gagcattatc acacccatag tactgtataa ataaccagtt atgcaatcaa
     1501 atacccatgc tgttttacaa cactgttcaa tagcaggcac gtctgctaca ggttgctttg
     1561 ctatctgctt tgctcaagcc tcatcatacg gctagtttca ctaaccatgt cttagcttgg
     1621 cgtctttgtc agtttccgtt aagattgtcg caagtgcgat gaaaactgcg caatagcagc
     1681 tgtcagatac ggatacaacc ccgccacacc ggccaaaccc ggcacactgg gcgcccgtgc
     1741 agtactaggg gaaggtaccg tattcaagta ctacttgctg tgccagaatt cgagcattcc
     1801 ggtcaataac aacagataac cgccatgaga atcctgatcg ctgaagatga cagtttgtta
     1861 gcagatgcac tgactcaatc attgcgccaa agcggctatg ccgtggatgc agtcagtgac
     1921 ggcatggcag ccgacacggt gctgcgctca caagagtttg atctgctaat cctagacctt
     1981 ggtttgccac gcatgtcagg cctagaggtg ttgcaaagcc tgcgtaacca gaattcgcgc
     2041 ctgccggtat tgatactgac ggccgctgat tcagttgacc agcgtgtcaa aggattggac
     2101 ttgggtgctg acgactacat ggccaaaccg tttgccctgt ctgagctcga agcacgtgtg
     2161 cgagcattga ctcgccgtgg cgccggtggc ggcagcactt tgctcaaaca cggccgactg
     2221 gtgtttgacc agaccggacg tgtggcctcg gtcgatgacg tggcacttga actatcagcg
     2281 cgtgaagtca gcctcctgga aatcttgctc acccgagctg gtcgcatggt caacaaaagc
     2341 cagatcgtcg accatctgtg ccagtggggt gaagaagtca gctccaacgc catcgaagtt
     2401 tacgtacacc gcctgcgtaa gaagctagaa cccagtggtg tgcgcattgc aacggtgcgt
     2461 ggcttgggct attgtttgca gcgtgacccc aatgagggca atagcaacag tactgacaac
     2521 caccatactg gcaccacaaa caacaatcag tcttccgcag gttagtggca tgctgcctgg
     2581 caattgaatc acacacgcac atggcagcta acccacccga tcgtctacaa cccgccagca
     2641 gcgagctgtc tggcgactca gcgttaggcc cgacaggtgc tgccactggt ggtaccactg
     2701 gtgctaccag tggtgccgca actagcgcaa gaacacccaa cggcaacagc aatggcgcct
     2761 acagccgcag cttgctcggt gaaatcctgg actggatgct agcaccgctg tttttactgt
     2821 ggcccatgag cgtggcgatc acctatgtgg tcgcccaaga catcgccaac acatcctatg
     2881 accgcaactt gcgtaacgcg ttgtcagttc tgtctgaaca gattgaatgg cccaatggcg
     2941 agaccggtgt acccatcttg cccctgaatc cgctgaccaa ggtggcgctt cgcacctacg
     3001 acagtgaggg tgtgttctgg aaggcacaag tggtgctcta caccggccaa ggtcaagtcg
     3061 aaggccctgt gattggtggc gacgatgccc tgccctcgcc caaactgaac tacgaagacg
     3121 ttcgcccggg tcgtgtgatg tacaaagacc agaccttaag tggctttgaa gtgcgcttag
     3181 cctatcagtg ggcacaaaac ccacggtttc ccaccgatga cctggtacta ctggtggtag
     3241 ccgaaggccg tgaacctcgc gtggcgctgg ccaacgagat catcaaaggt gtgatcatcc
     3301 cgcagttctt agtgttgccg gtagcggtct tattgatctg gtttggtctt tcgcgcggtg
     3361 tggcgcccat caacgccttg caacgccgcc tgcgggcgcg ccgccccgat gacttgtcag
     3421 ccatcgaaga agacgccacc ccagctgaga tcacgccgct cgtgactgcc atgaatgatc
     3481 ttctgactcg tctttccggc aacatcgagg cgcaacggcg gttcgtggct gatgccgcgc
     3541 atcagctaaa gactccccta tcaggactgc gcctgcaagc cgaaattgca ctgaagtcgg
     3601 caacaaaccc tgagaccgaa gaaaacctgc acaagatcgt tgccggcacc gaacgtgcca
     3661 cccgcttaat taatcaatta ctcctgatgg cctcagcaga aaaccctgat catgtgcaac
     3721 tcgtgccagt taacctcact gcattggccc gccaagtcac tgaggactgg gtcgagcagg
     3781 cactcgcgcg cggcgtggat ctcgggtttg agtccaacga agacaacgcc atgattcgtg
     3841 gccagtcact gttgctctct gaagcattga acaacctaat cgacaatgcc ctacgctatg
     3901 caccgtattc gggccaagtc accgtgagcg tgcaagcaag ccccaccgaa gtcgccctgc
     3961 atgtactaga caatggcccc ggcatctcgc ctgaagaacg tgatcgcata tttgaccgct
     4021 tctaccgcgt acttggcacc caaacccatg gcagtggttt ggggcttgcc atcgtcaaag
     4081 aaatcgccca aaaacaccaa gcctggttaa cggtggacac cgcacatccc gaccaaata
//
LOCUS       DATBNL010000786         2995 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_99059, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000786 DATBNL010000000
VERSION     DATBNL010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99059"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VIC30_13385"
     CDS             complement(<1..239)
                     /locus_tag="VIC30_13385"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY7805409.1"
                     /translation="MPEVAANATHATLVCWNRSEGEKIEAGQSIADVETDKAVLELPV
                     NDSAIVGKLLVSNGQDVPVGEPIAVLLQPGETLEDG"
     gene            complement(263..2452)
                     /locus_tag="VIC30_13390"
     CDS             complement(263..2452)
                     /locus_tag="VIC30_13390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006463058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY7805410.1"
                     /translation="MTPTLKSLRSDAPWVELVPTAKDWKLIGGDRLGTLLVCMQVIRV
                     FEETVLDLAAKGLVHGPAHSSIGQEGGAAGSIVGLFSKDQVNGSHRGHHQFVAKALMH
                     LTSGELDPREPLSPGVREMLKRTLAEILGLSQGFCKGRGGSMHLQWLQAGAIGTNAIV
                     GGGVPLAAGSAWANKYSKSDCVTVTYFGDGAVNIGPVLETMNLAAAWQLPLCFFIENN
                     QYAVSTHVDEVTAEPRLGARGQAFNIPSWSVDGMDPLAVHLAMQAALAHMRAGKGPTI
                     IEASVYRYFHQNGPFAGSAFGYRSKEEEAQWRERDPIELVTAKMIARKLITKASADSL
                     REHIQSLMRDVTAELLEDDPDNEGKSRIRPELWPSADFRDVGIRGDLSELQQLPKAPD
                     GHAGHAMVERKMIDVVADVMAHRMKQDDRIMTLGEDIHRLKGGTNGATRGLKELFPDR
                     VLGTPISEAAFVGLGGGMALDGRYRPVVEFMYPDFMWVAGDQVFNQIGKARHMFGGDN
                     AVPLVLRTKVAMGSGYGSQHLMDPAGIFATSPGWRIVAPSTPYDYIGLMNAALACQDP
                     VLVIEHIDLYNTTGLVPEDDMDFVLPPAAAAIRREGEVVTVLTYLSMVQHSLEAVESC
                     GIDAEVIDLRWLDRASLDWDTVGQSIMKTNAVVIVEQGSLGTSYGGWLSDEIQRRYFD
                     WLDAPVLRVTGGEASPSISKVLERAACARTEEVVVGLKRMLQEKGIG"
BASE COUNT          762 a          878 c          662 g          693 t
ORIGIN      
        1 ccgtcctcaa gggtctcacc aggttgcaat agcaccgcaa tcggctcgcc taccggcacg
       61 tcctgtccgt ttgacacgag tagctttcca acaatagctg agtcgtttac tggcagttcc
      121 aatacagctt tgtcagtttc aacgtctgca atgctttgac cggcctcgat tttttcaccc
      181 tcagatcgat tccaacaaac caaggtggcg tgggtagcgt tggctgcgac ttcaggcatt
      241 ctcagtacat atggcatggt ttttacccta ttcccttttc ctgaagcatg cgcttaagcc
      301 cgacaacaac ctcctcggtc cgagcgcaag ctgcccgctc taacaccttg gaaatgctcg
      361 gagaggcttc cccgccagtt acgcgcaata ccggtgcgtc aagccaatca aagtagcgac
      421 gctgtatttc atcggaaagc caaccgccat acgaagtccc cagtgatcct tgttcgacaa
      481 tcacaaccgc attggtcttc atgatgctct gcccgaccgt atcccaatcc agacttgcgc
      541 gatcgagcca gcgaaggtcg ataacctcgg cgtcaatgcc gcaagactcg acggcttcca
      601 ggctgtgctg caccatggac aagtaagtca gcacagtgac aacttcgccc tcgcggcgaa
      661 tcgccgcagc agctggcggc agcacaaagt ccatgtcatc ttctggcact agccctgtcg
      721 tgttgtacag atcaatgtgc tcgatcacca aaacaggatc ttggcaagct aaagccgcat
      781 tcattagacc aatgtagtcg tagggtgtgg aaggcgcaac gatgcgccaa ccaggactag
      841 ttgcaaatat gcctgctgga tccattagat gctgtgaccc atagccagaa cccatcgcca
      901 cctttgttcg cagcacgagt ggcaccgcat tatcgccacc aaacatgtgc ctagctttgc
      961 cgatctggtt aaacacctga tcaccggcaa cccacataaa gtcgggatac ataaactcaa
     1021 cgaccggtcg ataccgacca tcgagtgcca tgccgccacc aagcccaaca aacgcagcct
     1081 cactgattgg cgtgcccagc acgcgatccg gaaataactc cttcaaacct cgtgtcgcgc
     1141 cgttggtacc gcctttcaat cgatggatat cctctcccaa ggtcatgatg cggtcgtctt
     1201 gcttcatgcg atgggccatg acatcagcga ccacatcgat catctttcgc tccaccatcg
     1261 cgtgacccgc atgaccatca ggggccttag gcaattgctg caattcgctc aaatcgccac
     1321 gaatcccaac atccctgaag tccgcgcttg gccaaagttc aggtcgaata cgagatttac
     1381 cctcgttgtc tggatcgtcc tccaaaagct ctgccgtaac atctcgcata agcgactgaa
     1441 tgtgttcacg caggctgtcg gcgctagctt tggtgatcag tttacgagct atcatctttg
     1501 cggtcacaag ctctatcggg tcacgctcgc gccactgcgc ctcttcttct ttgcttctat
     1561 atccaaaagc actgcctgca aaaggcccgt tttgatgaaa ataacgatat acgcttgcct
     1621 caatgatggt tggccctttg ccagcacgca tatgagctaa agcagcctgc atagccaaat
     1681 gtacagccaa cggatccatg ccatcgacag accagctcgg tatgttgaat gcttgtcctc
     1741 gcgcacctaa cctaggctca gccgtgacct catcgacatg cgtagaaaca gcatattggt
     1801 tgttctcaat aaaaaaacat aatggcaact gccaggctgc cgctagattc attgtctcaa
     1861 gcacagggcc aatgttgaca gcaccatcgc cgaaatacgt gacggtgaca caatctgatt
     1921 tgctgtattt attcgcccag gccgagccag cagccagtgg gacgccaccg ccaacaatag
     1981 cgttggtccc aatggcacct gcttgcaacc actgcaagtg catagacccg ccgcgccctt
     2041 tgcaaaagcc ctgcgacaag cccagtatct cagcgagggt gcgtttaagc atttcacgta
     2101 cacccggcga cagtggttct ctagggtcta actcaccaga ggtcaaatgc atcaaggctt
     2161 tagcaacgaa ctggtgatgc ccgcggtgtg atccattaac ttggtcttta gaaaacagcc
     2221 caacaataga tccagccgca cctccttctt gaccaatact cgagtgtgcc gggccatgca
     2281 ccaaaccttt tgctgccaag tccagcaccg tttcctcaaa cacacggatt acttgcatgc
     2341 aaaccagaag cgtccctagc cgatcaccac cgattaattt ccaatcctta gccgtcggca
     2401 caagttcaac ccaaggcgca tccgacctca atgatttaag agtaggcgtc atgcaatgct
     2461 ctccgattcg caattaagac attgttcata atcgatccgc tttctgctga gttacggctt
     2521 taagtccatt tgtcggaact cctccactga tcaccgtagc accatggcga gtccaacagt
     2581 accctgtgag cctgcagaaa ctaggctcgg cgcctactct gcaatatgca gcatgagttt
     2641 cctgtctttg gattctcgcc ataagcttgc cacaatctat caaagacgaa aatcaaagtg
     2701 ggtcgaacgg attttcaact aaaactagca aaacgctcac tcagtacagg caatgcggta
     2761 ttcatttgtt taacccattt ctcaagtcga ctgcacgact gtttagcgaa agaaagcatt
     2821 ccaaattcga aaagcctgaa agaccttcgt ttgctaccat cggaaaaata tgagaaaaat
     2881 ttaggaggca aacatggagt caccagtagc tagagcaggt gaatctgatg catcgtttac
     2941 ggtgatttat cagcgcatga tattgatctg aagtaaacca actccacagc gctaa
//
LOCUS       DATBNL010000787         2082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_159256, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000787 DATBNL010000000
VERSION     DATBNL010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159256"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1392)
                     /locus_tag="VIC30_13395"
     CDS             complement(<1..1392)
                     /locus_tag="VIC30_13395"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY7805411.1"
                     /translation="MTSDVIVVGGGPCGLLTALLLARQGINTLLLEKHLHILQHPKAM
                     GITARSAEIFRQIGLLDVIKTAGIEQSVDTVSQWLKGGLNGELLGQSGKPRSDNRFSP
                     CTSLHCPQPHIESVLRKALADSTHVTALYGAHVQGFKQTPDHVQIEFELNGQQQTAST
                     HYLVAADGDQSFIRRRLGIERDGPGELGRFLSVYFKAEFGDELDGRLAYLSNVLGDDW
                     FELFVAVNGKDQWLMHHYLEGDETASQYNTQMVVELIRKASGFKNATIEIISMNPWVM
                     SPAVAQRWRDLRVFLVGDAAARVSPAGGLGMNNGLQSAHNLAWKLAHVISGYQSETLL
                     DSYEAERLPAAQFTYQNSSGNANETFGIVMAALSGQWTRAQEMINQSRRAGTGWGQDF
                     GIVYHSGAVLPDGSDEQLARDPVNDYIEQARPGHRAPLFDVIVNGQSCNSLDLSGYRF
                     VGWLGKKANPSAFK"
     gene            complement(1476..>2082)
                     /locus_tag="VIC30_13400"
     CDS             complement(1476..>2082)
                     /locus_tag="VIC30_13400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7805412.1"
                     /translation="VLVGLAPSNHLLSRVFTMGAQHAYWPDYLGAQRWAMRLRWHVAM
                     PVLTRLFGYFPGKRLGWLEDTPAGVVRDWVAPAPDFVDTYLDSGNFRGSRQLTASQCD
                     QLRQRFARVRASTLALSVTDDPYGTPAAIDRLLGNFTQSPKSQLRLSPADIAADQIGH
                     FGFFHSRFEQSLWPIALHWLQSGQVLDPRADVGSNKSSTNP"
BASE COUNT          496 a          556 c          565 g          465 t
ORIGIN      
        1 tttgaatgcg ctggggttag cttttttgcc aagccacccc acaaaacgat aaccagacag
       61 atcaaggctg ttgcaggact ggccgttaac gatgacatca aataggggtg cgcggtgtcc
      121 cggacgcgct tgttcgatgt agtcattaac cgggtcacga gccaactgtt catctgagcc
      181 gtcaggcaat accgcaccgc tgtgatacac aatgccaaag tcttgccccc aaccagtccc
      241 ggcgcgtcgg gactggttga tcatctcttg ggcgcgtgtc cattgtccag ataatgccgc
      301 catcacgatg ccaaacgttt cattggcgtt gcctgagctg ttttgataag tgaattgtgc
      361 tgcaggcagt cgttcggctt cataactatc aagcaatgtc tcagactggt agcctgagat
      421 gacgtgcgct agtttccaag caagattgtg ggcactttgc aggccgttat tcatccctag
      481 cccgcctgct ggtgacacac gggcagcggc atcgccgacc agaaatacac ggagatcccg
      541 ccagcgctgc gccacggccg gggacatgac ccatggattc atactgatga tctcgatggt
      601 ggcgttttta aatccactgg ctttgcggat gagttcgacc accatctgcg tgttgtattg
      661 gctagccgtc tcatcgcctt caagatagtg gtgcatcaac cactggtctt tgccattgac
      721 tgcgacaaat aattcaaacc aatcatcacc aagtacattg gataggtagg ctaggcgacc
      781 atcgagttca tcgccaaatt ccgccttgaa atacacgctt aaaaaccgac cgagttcgcc
      841 cggaccgtcg cgttcaatgc caagtcgacg tcgaataaaa ctctggtcac catcggcggc
      901 gaccagataa tgagttgaag ccgtttgctg ctggccattg agctcaaact cgatctgaac
      961 gtgatcaggg gtttgtttaa aaccctgcac gtgtgcgccg taaagagcag tgacatgggt
     1021 gctgtcagct agtgcctttc tcaacaccga ttcgatgtga ggttgcggac agtgcagcga
     1081 agtacacgga ctaaagcggt tgtcggacct cggtttgccg gattgcccga gaagctcgcc
     1141 gttgagccca cctttgagcc attgtgagac ggtgtcaacg gattgctcga tgccagccgt
     1201 cttgataacg tcaagtagac cgatctgccg aaaaatctcg gctgagcgtg ctgtgatacc
     1261 catggctttg gggtgctgca gtatgtggag atgcttttct aggagtaggg tgttgattcc
     1321 ttgtcgcgcc aatagcaaag cagttagcaa tccacagggt ccgccaccca caacgatcac
     1381 atcgctggtc atgccagtct ccgaaaccag acaagattcg aatgtaccta tgaatcacga
     1441 tcccaactac tagggattgg tactaggcac cagtgtcagg gattcgtaga agatttgttg
     1501 gatccaacgt cagcccgagg atctagcacc tgcccgcttt gtaaccaatg caatgcgatc
     1561 ggccacaggc tttgctcaaa tcgactgtga aagaaaccaa agtgcccgat ttgatcagcc
     1621 gcgatgtcag ccggtgacag tcgcagctga gattttggac tttgcgtgaa atttcctaac
     1681 aagcgatcaa tggctgctgg cgtgccataa gggtcgtcgg tcacactgag cgccagtgtg
     1741 gatgcgcgaa ctcgcgcaaa acgctgacgc aattggtcgc attgcgaagc ggtcaattgg
     1801 cgagaacccc ggaagtttcc agagtcaagg taagtgtcta cgaagtccgg tgccggtgcc
     1861 acccagtctc gcaccacacc agcgggcgtg tcttccagcc aaccgagtcg cttaccagga
     1921 aagtaaccaa agagccgggt caagactggc atggccacat gccagcgcaa gcgcatggcc
     1981 cagcgttgtg cgccaaggta gtcgggccaa taggcatgct gtgcacccat ggtgaacacg
     2041 cgggacagta aatggtttga aggcgcaaga cccacgagca ca
//
LOCUS       DATBNL010000788         5202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29370, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000788 DATBNL010000000
VERSION     DATBNL010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5202
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29370"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VIC30_13405"
     CDS             <1..780
                     /locus_tag="VIC30_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEY7805413.1"
                     /translation="GLPLDLPDLAQDFPKAALIPILSDARGVQLVVKKWLKKNRLPSA
                     IVLEHPRLAGGHLGAAKVSDLESERFEFETAIPQIIAAFREMGIEGQIPLIAAGGISS
                     LADIKRLQSLGASAVQLGTAFAVTQECDAHDNFKQVLAGAKPEDVVEFVSVAGLPARA
                     VKTPWLEKYIRIEPILKERAHAKERCNMAFDCLAHCGLRDGKSEMGQFCIDQQLGHAL
                     DGDTQKGLFFRGKGKLPFGSEIRPVQDLLAWLLGGVEPAAA"
     gene            2326..2655
                     /locus_tag="VIC30_13410"
     CDS             2326..2655
                     /locus_tag="VIC30_13410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805414.1"
                     /translation="MADNKIPLPFEVSRTALELGERMRIARKRRRLLQSEIARKAGVG
                     EKTIPLLENGDAGVSIGNVLSVLWALGLLSSASALADSDHNEHGKTLELVRLHKRIRH
                     PLPDNDF"
     gene            3018..3245
                     /locus_tag="VIC30_13415"
     CDS             3018..3245
                     /locus_tag="VIC30_13415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012838313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Y4mF family
                     antitoxin"
                     /protein_id="HEY7805415.1"
                     /translation="MKNTTDCTLIGSLIRHERKRQGLTQEQLAAIAGVGIRFVRELEA
                     GKTTCQLGLALQVMRTLGLSLQINNRDGSLT"
     gene            3242..4498
                     /locus_tag="VIC30_13420"
     CDS             3242..4498
                     /locus_tag="VIC30_13420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005879940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HEY7805416.1"
                     /translation="MTRSLDVYFANENAGQLQQNEDGSLEFTYWPNYLSIDRAVAISV
                     SMPLQEAPFTDRIARPYFSGLLPDEGARRQLTRAIGISSDNDFGLLEVIGGECAGALS
                     LVPAGKPLSEPLARAPEPLSDKQLADILGLLRTRPLLGGMLDVRLSLAGAQNKLAVCQ
                     VDGRIALATGGQPTSHILKPAIDGLEGTVENEVFCMRLATKVGLNAPNVYKEHAGDLP
                     YYLIERYDRVTDASGSIKRLHQEDFCQALSIAPTLKYEAEGGPGTLQSQQLIRSVTRT
                     PAADEFHFLRMLMFHVLIGNADAHAKNYALLYRDKAPELSPVYDAICTAVYPSMSKRL
                     AMEIGGRSLADTLQLKHWLTLVPDTQPAQRILKQELQTMSDTIVDHASDLATELRDEG
                     IEHPIIGKIQRVIQKRAKQIASILRT"
     gene            4700..4852
                     /locus_tag="VIC30_13425"
     CDS             4700..4852
                     /locus_tag="VIC30_13425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805417.1"
                     /translation="MHVSLTPDLESRVKANIEVWPHGNATEAVREALLMHTHKQSIHE
                     IKLAEQ"
BASE COUNT         1362 a         1374 c         1269 g         1197 t
ORIGIN      
        1 ggtttgccac tggacctgcc agatctggca caagactttc ctaaggcagc attaatcccg
       61 atcttgtcgg atgcccgtgg cgtgcaattg gtcgtcaaga agtggcttaa aaagaaccga
      121 ctgcccagtg ccattgttct cgaacacccg cgtttggccg gtggtcactt gggtgccgcc
      181 aaagtcagtg atctggaatc cgaacggttt gagtttgaaa ctgccattcc acagatcatc
      241 gcggcttttc gcgagatggg cattgaagga cagatcccgc tcattgccgc cggtggcatc
      301 agtagcctag ctgacattaa acggcttcaa tccttaggag cgagtgccgt acagttaggt
      361 accgcttttg cagtcacgca agaatgtgac gcccacgaca acttcaaaca agtgttagct
      421 ggcgccaaac ctgaagatgt tgttgagttt gtcagcgtgg cgggcttgcc cgcacgcgcg
      481 gtcaagaccc cgtggcttga gaaatacatc cgcattgaac ccatcttaaa agaacgcgct
      541 cacgccaaag agcgttgcaa catggcattc gattgtctgg ctcactgtgg gcttcgtgat
      601 ggcaagtccg agatgggcca gttctgcatt gatcagcagc tagggcatgc attagatggt
      661 gatacccaaa agggtctgtt ctttcgaggt aagggcaaac tgccgtttgg ctccgaaatc
      721 agacccgtac aggatctctt ggcatggctc ttgggcggtg tagaaccggc agcggcataa
      781 gcgactgcct gatccccaga aaatgaaagc gcaccacact taaaaagaca actagatcac
      841 cgagtcatac tgctgtgcct cggttaaatc tttgctgcag ccgtcttagt tgtcgccgcc
      901 tgatactgtc tggtaggcgg tcgaccttgt ctcgaaactc attgagagtc gctttagata
      961 ccctgagctg cttgacacat ttgcatcacc gagacccaag acggtaattt gtcacaatag
     1021 gctttgcagc cctatcaagg cagctcgctt tgaccgagct tttatccgga gcctgagcat
     1081 gctcgggtga taggtgcttt tgatgcgatt gaaactttct ggcttcgaat tgtttgtagc
     1141 taaagggcag acttaacaac accccgcaaa cccgaatata tcggtgacca caatacgtac
     1201 actcgtgtct actgctgccg agaattaagc gctgccaacc ttgacgcgga accacacgca
     1261 acgcatggtt gcaatagtgg caaagcaaat ccaaaaacac taagtacttg cgaccacaat
     1321 ccggacaggc gaagcggcga ctaccaggca acaagcgctg tagcggcaaa cgctgaacac
     1381 gatacaggtt tttactacat cttttgcaaa tcacagttgc ccaccctttg catttttcat
     1441 acacgatcaa accacccgac gcgtggcttg ctatcaagcc tcaaaagatt ggtggtacgt
     1501 ggtcaccacc gatcggccga tcggcgcaat gcgttcagcc atcagcgaac ggttgacacc
     1561 tgtagtaacc accctttcga tcctgacagg tttagactta agtcgtattg atacgcagtg
     1621 actattagtt acttaacatg atcatacgat gcgcttgctc gttttgctct caaaacttct
     1681 caaaacagtc ggtacatgca cacggcattt ggcctggcaa ggtgccacga cgcagcgtgg
     1741 gcaaaaagag gtgtcagcct ctggcgttgg acgcattgga tctaccctaa gcaaaggctc
     1801 agggcatctg cggcactatc gatacttggc ttgaataggc caaaccgtcc tcagataact
     1861 ctaaaacccc gatccgcgat tattgttacc gatgccgcat tactccctac aaaacgaggg
     1921 tcgagttttc tctcagagtc tctcaggcag agcagattcg aggtctcatt tgacaggtga
     1981 tttgcagaca atggactcgt gccgaaggct cgggtgctcc caaatgaact tacggtatgg
     2041 ccaaccggcc aaaaccgatt gcttgggtgc tctctccggt agcctgggtg gaggattttg
     2101 ggtggccacc tggacagacg ggataaattt acaaagaaat tcggaaagag ggacaagctt
     2161 tgaatgatgt aggatcaacc gacgaacaat ggtgagacct cttaactgga gaagccgagg
     2221 gatcctgcag gtagattaag aagaaaggct tgtttctgcc cttaaaaaat atttatttga
     2281 ccttttatat gttctcatcg tctaaatatg actgaaataa gacatatggc tgacaacaag
     2341 atcccactgc cattcgaagt cagtagaacg gctctagagc tcggtgagcg catgcgcata
     2401 gcgcgtaaac gtcgtcgact gctgcagtct gagatcgcac gaaaggctgg cgtgggcgag
     2461 aagactattc ctctcctaga aaatggcgat gccggcgtct cgatcggtaa tgtattgagc
     2521 gttttatggg cgcttggttt gctttctagc gcaagtgcgc tcgctgattc cgaccacaac
     2581 gagcacggca aaacacttga gcttgtgcgc ctgcacaaac gtattcgcca cccactgccg
     2641 gacaatgatt tttagaaaga cacccgatgg ccaccaagat taatcaagac caaacctgct
     2701 acacatttat ccagctgccg aacactgacc ttaagacctc acaaagcctc gcaagacatc
     2761 acacggcagg caccaagcca acgactattg cctgatagtt gttatcgccc cctaagacaa
     2821 aaacttcgcg tcgatcatgt cgcccagtcg tgtatcacct caacgccaat ccggactaca
     2881 cagccctcaa gcaagaaaaa aatcccgatc ggggttattg ttagccccca tgtcttgcct
     2941 cattaaaaaa atcccgatca ggaataaaaa tgatagaaag atagaaataa actaaaataa
     3001 tcccgagagg gatttccgtg aaaaatacaa ctgactgcac attaatcgga tcactgatcc
     3061 gccacgaacg caaacgccaa ggcctgacgc aagaacaact agcggctatt gcgggtgttg
     3121 gcattcgttt tgtgcgcgaa cttgaagccg gtaaaaccac ctgccagctc ggactggcac
     3181 tgcaggtgat gcgcacgctt ggcctctcgt tgcaaatcaa taaccgcgat ggaagtttga
     3241 cgtgacacgt agcttggatg tttatttcgc caacgaaaat gcgggccagc tccaacaaaa
     3301 cgaagatggc tcacttgaat tcacgtattg gccgaactat ctatcgattg atcgcgccgt
     3361 tgccatctcg gtttcaatgc ccttgcaaga ggctcctttc accgatcgga tcgcccgtcc
     3421 gtatttctca gggctcttac ccgatgaggg ggcacgacga caactgacca gagcaatagg
     3481 gatttcttca gacaacgatt ttgggttgct agaggtcatt ggcggtgaat gcgctggcgc
     3541 acttagccta gtcccggccg gcaagccgct gtcagagcct cttgcacgag cgcccgagcc
     3601 attgtcagac aagcagctag ccgacatcct tggcctgttg cgcacgcgcc ctcttttggg
     3661 cggcatgtta gacgttagat tgtctttggc cggcgcacaa aataagctcg ctgtctgcca
     3721 agttgacgga cggattgcct tggccacagg tggccaaccc accagtcata tcctcaagcc
     3781 agccattgat ggcctcgaag gcacggttga gaacgaagtt ttttgcatgc ggctagcaac
     3841 aaaagttggg ctcaatgcac ccaacgtcta caaggagcac gccggtgatc ttccgtatta
     3901 cctcatcgag cgctacgacc gtgtgactga tgccagcggc agcattaaac gactgcatca
     3961 ggaggacttc tgccaggctc taagcatcgc accaactctc aaatacgaag ccgagggtgg
     4021 ccccggcaca ttgcagtcac aacaactcat tcgttcggtt acacgcacac ccgccgcaga
     4081 cgaattccac tttctgcgca tgctgatgtt tcatgttttg attggcaacg ccgacgcaca
     4141 cgcaaagaac tatgccttgc tttaccgtga caaggcaccg gaattgtccc ccgtgtatga
     4201 cgccatttgc accgcagtct acccctcgat gagcaaacga ctagccatgg aaatcggtgg
     4261 ccgcagcctt gccgatactt tgcaactaaa gcactggtta acgctggtgc cagacactca
     4321 gcctgcccaa cggattttga agcaagaact acaaacaatg tccgacacca ttgttgatca
     4381 tgccagtgac ctagccaccg agttgcgtga cgaaggcatc gaacatccaa ttattggcaa
     4441 aatccaacgc gtcattcaaa agcgagctaa acaaatcgca tccatcctgc ggacttgaga
     4501 caggacggac tagtctttgc gtcctacaga acaaggcagc tcggctactg cagaaaacac
     4561 tgcaagatat tcgcggggca tatccgtctg gcactaagat ggatagatac gctacaaata
     4621 aaacggaaat acaaagactg acaatctttg attaatctag ccatgtgaaa tagttgcgta
     4681 ttgtcaaagt aagattgcca tgcatgtgtc cttaacccca gatctagagt cccgggtgaa
     4741 agccaacatt gaggtttggc cacatggcaa cgccaccgag gccgtccggg aagcactgct
     4801 catgcatact cacaagcagt cgattcatga gatcaagctt gccgagcaat gatcaagctg
     4861 tccccattag ccaatggtgt tgtaaaaccg ccattgactt gttttgaggc tgtcgaaatc
     4921 gtacagacat tggaggggcc tggcttatcg caatccgtcc cattggcatg gaccggtaga
     4981 aacaaataga gcgccaaggc ggctgctaaa ggagtcaggc ggaaccgata agggcgcgct
     5041 tcacggccat gcttcattta tcttagatcg gcgtatcttc acattcacgt cgatttattt
     5101 ctctcacaat ctctcacgcc catttaagct gcacggatta agattgggta ttaaatctca
     5161 ttagacctag tatttgtact cacggattgt gcttaccaat ca
//
LOCUS       DATBNL010000789         2210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48659, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000789 DATBNL010000000
VERSION     DATBNL010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48659"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            601..1929
                     /locus_tag="VIC30_13430"
     CDS             601..1929
                     /locus_tag="VIC30_13430"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY7805418.1"
                     /translation="MVSGLYLGLLSMFLIFAIGLRLGFPDFLMNLYIVQQATGIIWSL
                     VVMGYARQYSDSWFGLDSFDRPASWITIVYGFLLCLFRLAFLSQFPFRGRTKLLIYVP
                     LCIYVPIFTLMALGYDSWALGINALTVTVTAVLSMLLVLFAIDWKSYTVRLVPRWLVT
                     FFFVFFGFATPFATSVVLWGEQAPRDPIGPLLFIAVASGALMSTLLFYRARSMANHLM
                     ASQLESKLLLQRSQERAKFSGMLAHEIKTPLSILSWVASSGQLDNRYTTYSQQAISNI
                     DSVLEKCLQAESIIDNEVVSQAVLLDVESLVHDVVTSVGGTDIVEISCAGEMKTYSDP
                     ALVQVVLTNLVENALKYGKCDAPIKVSLISDARQIIRVRVASAIGSAGAPDVSRVFEK
                     YYRGSLASSEPGSGLGLYLSKHISKLLGGDLICQLGEKEIWFEFSLPLSK"
BASE COUNT          489 a          471 c          583 g          667 t
ORIGIN      
        1 tcattgcttt cacaattgat atccatgcga gcaaattctc caaatgctgc cagacggcca
       61 agtttcgtat ggtggctttc ttgcctgcat gtcatgtttt ttttgtttgg cagtggcgtg
      121 ttggctcagg agcagacagg accagacttt gaaccgcggg cttacttgct tgatcctagc
      181 gggaaactca cagttgaaga ggtcatggcg aaaccggccg atgagtttgc acagttcaat
      241 aaaggcctaa ggttgggata caccgctggc actgtgtgga tgcggctcga gatttctccg
      301 acagcgcttg gtgaatcgcc agctttaggc agctcggatg tggtcctgat gttaaataac
      361 ccgcttttaa atgacgttag gctatacgac cccctgcaaa acaatgatcg accgatcatc
      421 gctggagacc tctatcggct gactcaaata gagcgagatc tgtctcctgt tgcgttttta
      481 ttgccgctcg gtgataggcc tcgagatgtt tatgtttcgg ttaaaagcac gggttcaatg
      541 atgttttctg tgacactcga acctttggag accgcattaa gaaacaatcg aacgtctggc
      601 ttggtcagtg gcttgtattt gggcctgctc tctatgtttt tgatctttgc aattgggctg
      661 cgcttgggct ttcccgattt tttgatgaat ctgtatattg ttcagcaagc aacaggaatt
      721 atttggtctt tggttgtgat gggctatgca cgacagtact ctgattcatg gtttggattg
      781 gactcattcg acagacccgc aagctggatt acgattgtct atgggttttt gctttgccta
      841 tttagacttg cgttcttaag tcagtttccg tttcggggtc gaaccaagct actgatttat
      901 gtgccgttat gtatttatgt gcctatattc acgcttatgg cgttgggcta tgacagctgg
      961 gctttaggca ttaatgcttt gactgtgacc gtgacagctg tgttgtcgat gttgttggtg
     1021 ttgtttgcaa tcgattggaa atcctacact gttcgcctcg tgccacgttg gctcgtcaca
     1081 tttttctttg ttttttttgg cttcgccaca ccttttgcga cctcagtcgt gttgtggggc
     1141 gagcaagcac cgcgagatcc gattggccca ttgttgttta ttgccgtggc gagcggagca
     1201 ctgatgtcga cgcttttgtt ctatcgtgcg cgaagtatgg ccaatcattt gatggctagc
     1261 cagttggaga gcaagttgct gcttcagcgc agtcaagaac gagctaagtt ttcggggatg
     1321 ctggcgcacg aaatcaaaac gcccttgtca attcttagtt gggtagccag ttcaggtcag
     1381 ttggataatc gttatacgac ttattcacag caagccatca gtaacatcga ctcagttttg
     1441 gagaaatgtc tacaggctga gtcgatcata gacaatgagg tcgtctcgca ggctgttctg
     1501 cttgatgtcg aatcgcttgt tcatgacgtt gtgaccagtg ttgggggcac cgacatcgtt
     1561 gaaatctctt gtgctggaga gatgaagact tactcggatc cagccttggt gcaagttgtc
     1621 cttaccaatt tagtggaaaa cgcactgaag tatggaaagt gcgatgcgcc cattaaagtc
     1681 agtttaataa gtgacgcacg ccagataatc cgggttcgtg ttgctagtgc tatcggctca
     1741 gccggtgcac cagatgttag ccgcgttttc gagaaatact acaggggttc tctagcatca
     1801 agtgaacctg gatcaggact ggggctgtac ttatccaagc acatctcgaa attgctgggt
     1861 ggtgatttga tttgccagct gggagagaaa gagatctggt tcgaattcag tttgccgctg
     1921 agcaagtaac ttcgcaacag gaacacggtt cggtcatcat gtcgaatcga tttatcaccg
     1981 aatacaacat tgttcgaatg tatagttgcc cgcttgatga ttgcaattga tgattgccat
     2041 tgatcggctg gcgccctgct ttgcaaaaac ttagaaaatt ggttttgttt catgggctgt
     2101 gcgtttaaga gccgctgcag ttagattgaa tcggtcaagc acgctagcgc cgatgcattg
     2161 ccgctagcat gatctgatgg cagaaagcgc aagctggctt gcaataataa
//
LOCUS       DATBNL010000790         1656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_159274, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000790 DATBNL010000000
VERSION     DATBNL010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159274"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VIC30_13435"
     CDS             <1..639
                     /locus_tag="VIC30_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019653871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7805419.1"
                     /translation="MVDLVQAMSLETPVLVGHDWGARAAANAVGLEPAIASALVMVSV
                     GYGTNSPDQPMSIAQARRYWYHWFMATPRGEQTVRHQRAEFARIMWDTWSPAGWFTEA
                     DFEAACQAFTNPDWADITLHSYRHRWGHAPGFALHDNDEKRLHPAPLISVPTLMLHGQ
                     EDYCNVPETSAGKEASFTGRYERVLLPGVGHFPPREDPTRVAQEILRLTDSL"
     gene            complement(631..>1656)
                     /locus_tag="VIC30_13440"
     CDS             complement(631..>1656)
                     /locus_tag="VIC30_13440"
                     /inference="COORDINATES: protein motif:HMM:NF015764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805420.1"
                     /translation="MIEHTDPRKRGFIGSFAVSGAVGGMLLGSGFGALLAAILSEQAL
                     QEWGWRVPFIAGLVLGLAGIYLRREPLAQGALVDQPHNPLKTALTKHRPELLQVAGMS
                     MINAVVFYLAFVYLVSWLETVDGLAPETSLRINTVTLLVLLPVMIFGGWLSDRVGGKR
                     VMLVSAMVTTVLAWPFFWMLHQSTLWMVYVGQLGFAVAIGPYLGAQPAYMVSVIKPAV
                     RCTAAGLGYNITLGIAGGLSPMVATWLVSRTHDDLSPAFMIITAGVISIVTLLSIKST
                     NMNATNDPLQRARSLIDAVDRGGVPSNPGIVNAVARDLGLEVSRQAALEDTVKRIREA
                     VQRGSSQ"
BASE COUNT          394 a          507 c          443 g          312 t
ORIGIN      
        1 atggtggact tggttcaagc catgtcacta gagacgcctg ttctggtggg tcacgattgg
       61 ggtgctcgag cggcagccaa cgccgtgggg cttgaacctg cgattgcctc ggcgttggtt
      121 atggtatcgg tgggctacgg caccaactca ccggaccaac ccatgagcat tgcccaggcc
      181 cgtcgctatt ggtatcactg gttcatggcg acgccgcgcg gagaacagac cgttcgccat
      241 caaagagccg agtttgctcg catcatgtgg gacacctggt cgcctgctgg ctggtttact
      301 gaggcagatt tcgaggcggc ctgccaagcc ttcactaacc cggattgggc agacatcacc
      361 ttgcactcgt atcgacatcg ctggggacat gcgccggggt ttgccttgca tgacaacgat
      421 gaaaagcgac tgcaccccgc cccgctgatc tctgtgccta cgctaatgct gcatggtcaa
      481 gaagactact gcaacgtacc agagacatca gccggcaagg aggcctcatt cacgggccgc
      541 tatgagcgcg tgctactgcc aggtgttggt cacttcccgc cgcgtgagga tccaacgcgc
      601 gtggcgcaag agatcctgcg cttgacggac tcactgtgac gaaccgcgtt gaaccgcttc
      661 acgaatacgc ttaacggtgt cctcgagtgc cgcctgacgg ctgacttcga gaccaagatc
      721 acgcgctact gcattcacaa tcccgggatt tgacggcacg ccacctcgat caacagcatc
      781 aatgagcgac cgggcgcgct gcaggggatc gttggttgca ttcatattgg ttgatttgat
      841 cgatagcaag gtcacaatgc taatgacacc cgcggtaatg atcatgaaag ccgggctcaa
      901 gtcatcgtgg gttcgactca ccaaccaagt cgccaccatg ggacttaagc caccggctat
      961 accgagcgtg atgttgtagc ccagacctgc tgcagtgcat cgcaccgccg gtttaatcac
     1021 agacaccatg taggccggct gggcgcctag gtaggggcca atagccaccg caaaaccaag
     1081 ttgtccgacg tacaccatcc acagcgttga ctgatgcaac atccagaaaa aaggccacgc
     1141 caacacagtc gtcaccatcg ctgacaccaa catgacccgc ttgccaccga cgcgatctga
     1201 gagccagcca ccgaagatca tcacaggcaa cagcaccaac agcgtgaccg tgttgatgcg
     1261 cagcgacgtc tcgggagcca aaccatcgac ggtttcaagc caactgacca gatagacaaa
     1321 tgccaagtaa aagaccaccg cattgatcat tgacatgccg gcgacctgca agagctcggg
     1381 gcgatgtttg gtcaatgctg tcttcaatgg attgtggggc tggtcaacca aagccccttg
     1441 cgccaacggc tcacgacgca ggtaaatacc cgctaagccc aataccaagc cggcgatgaa
     1501 cggcacgcgc cagccccatt cctgcaaagc ttgctccgac aaaatcgctg ctagcaaagc
     1561 accaaatcct gaacctagca acatgccacc caccgcacca ctgaccgcaa acgagccgat
     1621 aaacccgcgc ttgcgaggat ccgtgtgttc tatcat
//
LOCUS       DATBNL010000791         4071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_48663, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000791 DATBNL010000000
VERSION     DATBNL010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48663"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1318
                     /locus_tag="VIC30_13445"
     CDS             <1..1318
                     /locus_tag="VIC30_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013743919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEY7805421.1"
                     /translation="SASPTSVTLARSSDDVITIDDKKTLAVVARSLKSNASDEMRMRR
                     GSIVTIAELDDGAWEILNFPEVEGALVAMTPQDGAIRAMVGGFDFFSGKFNRVTQAWR
                     QPGSSFKPFIYAASLERGMTPTTLISDQPFMLTAEQTGSGEDWNPKNYGNKYDDELTM
                     REAIAKSRNMVSIRILQAITPQYVQDYITRFGFQPEKHQPFLPMALGSGSVTPMQMAA
                     AFSVFANGGYRVTPFLIDYVTDSQENVLMRANPTVAGDAGARAIDPRTVYVMNDMLRG
                     VAQYGTAARAGRELKRRDLAGKTGTTNDSVDAWFAGYTPRLVGVAWLGFDQPKSLGDR
                     ETGGGAALPIWMGYMKKALEQFPEEPPGPPPSGLIVEGDGMFFAEYPPEEAISTVGVQ
                     EQKDSIDDLLESLDMNGGGGGFGADGVGDSTGNTSRPSATPLPITN"
     gene            complement(1352..1681)
                     /gene="cyaY"
                     /locus_tag="VIC30_13450"
     CDS             complement(1352..1681)
                     /gene="cyaY"
                     /locus_tag="VIC30_13450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEY7805422.1"
                     /translation="MTETEFDERISAILDIIETYADEWFEKLDVDVDTKREANVLNLL
                     FDNKVPVVINSQAPMQELWVAAPSGGFHYRFDGQHWKDTRGGVDLHDALSQIFSDATG
                     HSVTIKL"
     gene            1713..1934
                     /locus_tag="VIC30_13455"
     CDS             1713..1934
                     /locus_tag="VIC30_13455"
                     /inference="COORDINATES: protein motif:HMM:NF025012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEY7805423.1"
                     /translation="MSNRAPHLCTYRRLAFACGVSLLLVGCGYKGPLYMPPPPDTLGE
                     QDVPSSQAESSMPGEPENPSLEPAPIVIE"
     gene            1957..3252
                     /gene="lysA"
                     /locus_tag="VIC30_13460"
     CDS             1957..3252
                     /gene="lysA"
                     /locus_tag="VIC30_13460"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEY7805424.1"
                     /translation="MTSPTDQHTDQTPAGFPHFHYQNGTLHAEQVCLASLAKELGTPL
                     YVYSNASLIAAWQSYAQAIEGHRVLVCYGMKANSNLAILQTFARMGSGFDIVSGGELK
                     RVLAAGGDAGKVVFSGVGKQDWEMSLALQEGVKCFNVESVAELHRLSQVASRLGKTAP
                     VSLRVNPDVDAQTHPYISTGLKENKFGIAIEMAPQAYRLAKTLPGLNVVGVDCHIGSQ
                     ITEVSPYLDALDKLLALISRLKTEGIELRHLDLGGGLGIRYDDETPLAPEILLTAVFE
                     RLAKQGLDLELVLEPGRSLVGNAGILLTTVQYLKPTEDKDFAIVDAAMNDLLRPALYE
                     AWHGLLPVKPRGGTATVYDIVGPICESADWLAKGRSLALEEHDLLAIESAGAYGFVMA
                     GHYNSRPRGAEVLVDGDRWHLIRERETFEDLVRGEHLLP"
     gene            complement(3316..>4071)
                     /locus_tag="VIC30_13465"
     CDS             complement(3316..>4071)
                     /locus_tag="VIC30_13465"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805425.1"
                     /translation="MEIAMGWQAAFAMVALFCVLCAIAVNPLRAELDDDRDPDSRPSL
                     FKSLVEPVKLVLSHAPLRVLAAISFLFAITQLSLTTYLVTFLYEDLGWGLVAAGLALT
                     VAQAAGVGGRVLWGWMADNWLGSGYMLIGVALLLFAGAAAMPLFDTQTSVVWLYLVLM
                     VLGATAIGWNGVYLAEVARQAPSGHAGMATGGTLGFTFLGVLCGPPLFGVAAARFGSY
                     GDAYALLIIPALIIAVLLWVSRKRWSVHRSGSN"
BASE COUNT          970 a         1119 c         1088 g          894 t
ORIGIN      
        1 ctcggcaagt cccacgtcgg tgactttggc tcggtcgtcg gatgacgtca tcaccatcga
       61 cgacaaaaaa acactcgcag tcgtggcccg gtcactcaaa tctaatgcgt ctgacgaaat
      121 gcggatgcgt cgcggctcga tcgtgacgat cgccgaactc gatgacggcg cctgggaaat
      181 tttgaatttt cccgaggttg agggcgcttt ggttgccatg acgccgcaag atggtgcgat
      241 tcgtgccatg gtaggtggtt ttgatttctt cagcggtaag ttcaaccgcg tcacacaggc
      301 ttggcgtcaa cccggctctt cctttaaacc gtttatctat gccgcctcgc ttgagcgcgg
      361 catgactcca accaccttga tttctgacca accgttcatg ttgactgctg agcagactgg
      421 gtcgggcgag gattggaatc cgaaaaacta tggcaataaa tatgacgatg agctaacgat
      481 gcgcgaggcc atcgccaaat cacgcaacat ggtgtcaatt cggatattgc aggccatcac
      541 accccaatat gtacaggact acattacccg gtttggtttc caaccagaaa agcaccagcc
      601 tttcttgccc atggctttag gttcggggtc ggtgacaccc atgcaaatgg cagcggcttt
      661 ctctgtgttt gccaatggtg gctatcgtgt cacaccattt ctgattgact acgtgactga
      721 ctcgcaagaa aacgtcctta tgcgtgcaaa tccaaccgta gcgggcgacg caggtgcgcg
      781 cgccatcgac ccacgcacgg tttatgtgat gaatgacatg ctacgtggtg tagcgcaata
      841 tggcacggca gcccgtgcgg gtcgcgaact caagcggcgt gacttagccg gcaaaaccgg
      901 gaccaccaac gactcggttg atgcgtggtt tgcaggttac acacctagat tggttggcgt
      961 ggcatggctt gggtttgatc aacccaaatc tttgggagac cgcgagaccg gtggtggggc
     1021 agcactaccg atctggatgg gttacatgaa aaaagcgctg gagcagtttc ctgaagaacc
     1081 gcccggacca ccaccaagcg gtctgatcgt agaaggcgat ggcatgttct ttgccgagta
     1141 tcctccagag gaggctatct ccactgtagg cgttcaagag caaaaggatt ctatcgacga
     1201 cctactggag tcgttggata tgaacggcgg tggaggtggc tttggcgcgg atggtgtcgg
     1261 tgacagcact ggcaacacca gccgccccag cgctacaccg ctaccgatta caaactaaga
     1321 ttcaggccac tggcctgaat ctcgtggcgt ttcacagttt gatggtgacc gagtgaccag
     1381 tggcatcaga gaagatttgt gacagcgcat catgcaggtc cacaccgcca cgcgtgtctt
     1441 tccagtgctg accatcaaag cgataatgaa agcctccgct tggcgcagca acccaaagct
     1501 cctgcatggg tgcttgactg ttgatgacca ctggcacttt gttgtcgaac aacagattta
     1561 gtacgttggc ttcgcgcttg gtgtccacat cgacatcaag cttctcaaac cactcatcgg
     1621 catacgtctc gatgatgtct agaatggcac taatgcgttc atcaaactct gtttcagtca
     1681 taatcttatc cttaagcttt taggagcaat tcgtgtcaaa ccgtgcgccc cacctttgta
     1741 cttatcgtcg tctggccttc gcttgcggcg tgagtctgtt gttggtcggc tgtgggtata
     1801 aaggcccact gtacatgcca ccaccacccg atacgcttgg cgaacaagac gtgccttcaa
     1861 gtcaggctga atcgagcatg cctggcgagc cagaaaatcc atcgctagaa ccagcgccga
     1921 tcgttattga atagtttatt gcatcgcttg tcgaccatga cctcaccaac agatcaacat
     1981 acagaccaaa cgcctgcggg tttcccgcac tttcattatc agaacggcac actacacgcc
     2041 gagcaagtct gcttagcatc acttgccaaa gagctgggca cgcccctgta tgtatactct
     2101 aacgcgagcc taattgccgc ttggcaaagc tacgcgcagg ctatcgaagg ccatcgggtg
     2161 ctcgtgtgtt acggcatgaa agccaattcc aacctcgcta tcttgcagac atttgctcgc
     2221 atgggtagcg ggtttgacat cgtctccggg ggtgaactca agcgcgtgct tgccgccggc
     2281 ggtgatgctg gcaaagtggt tttttctggg gtgggtaagc aggactggga aatgtcgctt
     2341 gcgctgcaag agggcgtgaa gtgtttcaac gtcgagtctg ttgcggaatt acatcgcttg
     2401 tcgcaagtcg ccagtcgatt gggtaagacg gctccggtct ctttgcgcgt taatcctgat
     2461 gtcgatgcgc aaacccaccc ttacatatcc accggcctaa aagagaacaa atttggtatt
     2521 gccattgaga tggcaccgca agcctatcgt ctggccaaga ccctaccggg actaaatgta
     2581 gttggcgtgg attgccatat cggatcacag atcaccgaag tcagtccgta ccttgatgcc
     2641 ttagacaaac tactggcact catttcacga ctaaaaaccg aaggcatcga gttgcggcac
     2701 cttgacttgg gcggtggcct tgggattcgc tatgacgatg agacgccgct tgcgccagag
     2761 atactgctaa cagcggtttt tgaacgctta gccaaacaag gactagatct ggagttggta
     2821 cttgaaccgg gccgctcctt ggtaggcaat gccggtattt tgttgacgac ggttcagtac
     2881 ctcaagccca cagaggataa ggactttgcg atcgtggacg cagccatgaa tgatttgttg
     2941 cgcccggcgc tctatgaggc ctggcatggc ttactgcccg ttaagccacg gggcggcaca
     3001 gccacggtct acgacatcgt gggtcccatt tgcgaaagcg cggattggct cgccaaaggg
     3061 cggtctctgg cacttgagga gcacgatttg cttgccattg agtcagccgg tgcttatgga
     3121 tttgtgatgg caggccacta caactcacgc ccccgtggtg ccgaggtctt ggtcgatggt
     3181 gaccggtggc acttgattcg cgaacgcgag acttttgaag acttggtcag aggcgaacac
     3241 ctactgccct gatggggttg tcctgcgcac agttggcaga cgaaaacact tgtgccggtt
     3301 atttggtact tgggattaat tagacccaga ccgatgcacc gaccagcgct tgcgactgac
     3361 ccagagcaac accgcgatga tgagcgcagg aataatcagt agcgcgtaag catcaccgta
     3421 gctaccaaac cgggctgcag ccacaccgaa tagcggcggg ccacacaata cccccagaaa
     3481 agtgaaccca agggtgccac cagtggccat acccgcatgg ccactcggtg cctgacgcgc
     3541 gacttcagcc agatagacgc cattccaacc aatggccgtc gcccccaaca ccatcaacac
     3601 caaatagagc caaaccacac tagtttgagt atcaaagagt ggcatcgcag ccgcaccagc
     3661 aaacagcagc agcgccacac caatcaacat ataaccagaa cccaaccagt tgtcggccat
     3721 ccatccccac aaaacacggc cacccacacc agctgcctgt gccactgtca aagctaagcc
     3781 cgcggccacc aaaccccacc cgaggtcttc gtataggaat gtaaccaaat aagtggtcag
     3841 tgacagttgc gtgatggcaa acaaaaacga gatcgctgcc aagacccgca atggggcatg
     3901 agagagtacg agtttgacag gctcgaccag acttttaaat aacgatggtc gactatcggg
     3961 gtcacgatca tcatcgagct cagcccgcag aggattgacc gcgatggcac agagtacaca
     4021 aaagagcgcg accattgcga atgccgcttg ccagcccatg gcgatttcca t
//
LOCUS       DATBNL010000792         1542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_119076, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000792 DATBNL010000000
VERSION     DATBNL010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119076"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VIC30_13470"
     CDS             <1..877
                     /locus_tag="VIC30_13470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017234234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY7805426.1"
                     /translation="TVILTFLALVPLYAWLADDIYVLTYFGRILAFALAALGLNLVLG
                     YGGLASLGHAMYVGFGAYAVGILSSFGIVNGWLHLAAALLATLVIAVPVGWIALRTHG
                     MAFIMITLAFAQLFFYMFVSLRPFGGDEGLSLTELSDFGVLTGNKYAIYLSLFAAVVF
                     TLWLVSRIVNSRFGLVLKATRFNARRVNAVGTASRPYQLVAYVISAQICAVAGYFMAN
                     LNGFVSPAMMSWLVSAELMVMVLLGGMGTLFGPIAGAAGLLLIEDGLKMLTIHWPLIL
                     GPLILLFVLKMRQGL"
     gene            948..>1542
                     /locus_tag="VIC30_13475"
     CDS             948..>1542
                     /locus_tag="VIC30_13475"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY7805427.1"
                     /translation="MTELLRIDQLVKHYGAICVTDHVNLTVNAGEIHAVIGPNGAGKT
                     TLINQITGEVACDAGTIWFEGQDITRWPVAKRARAGMSRSFQINSLIPAFTARENVLL
                     AVQAARGHNFYFFKPLASQTDLLNEADEFLARVGLEQHANDLVSELAYGQQRLVEVAI
                     AMASHPKLLLLDEPMAGLGPTESERMIELLGRLRQDYG"
BASE COUNT          282 a          365 c          478 g          417 t
ORIGIN      
        1 cacggttatc ttgacgtttc tggccttggt cccgctatat gcgtggctgg ccgacgacat
       61 ctatgtgttg acctactttg ggcgcatcct ggcttttgcg ctggccgctt tggggttgaa
      121 cctagtgctg ggctacggtg gcttggcgag cttgggtcat gccatgtatg tcggtttcgg
      181 ggcctatgcc gtgggtattc tgagtagctt tggcatcgtt aacgggtggt tgcacttggc
      241 agctgccctg ctagcgacac tggtcatcgc cgtgcctgtg ggctggattg cgttgcgcac
      301 ccacggcatg gcgttcatca tgatcacgct ggcctttgct cagctgtttt tttacatgtt
      361 tgtcagtctg cggccatttg gcggtgatga ggggttgagc ctgaccgagt taagcgactt
      421 tggggtgctg actggcaaca aatatgcgat ttacctgtcg ctgtttgcgg cggtggtttt
      481 tacgctgtgg ttggttagcc gtatcgtcaa ctcacgattt ggcttagtgc tcaaggccac
      541 gcggtttaat gcgcgtcgtg tcaacgcggt gggtacggca agtcgcccct atcaattggt
      601 tgcctatgtg atttcggcgc aaatctgtgc agtagcgggc tacttcatgg cgaatctaaa
      661 cgggtttgtg tcgccggcaa tgatgagttg gctggtatct gctgaactga tggtgatggt
      721 gctacttggt ggcatgggca ccttgtttgg cccgatcgcg ggggcggctg gcctgctttt
      781 gatcgaggac ggtttaaaga tgctgacgat tcactggcca ctgattctgg gtcctttgat
      841 tttgttgttt gtcctcaaaa tgcgacaagg cctttagggc atgttgttgc caacagagga
      901 gacaattaag caaacaggga acgccaaaca ccaaaggggc ggcgccaatg actgagctgt
      961 tacgcatcga ccaactggtt aaacactatg gtgcgatctg tgtgactgac cacgtcaacc
     1021 tgacggttaa cgccggtgag attcatgcgg tgattggtcc gaacggggcg ggtaagacca
     1081 cgctcattaa tcagatcacc ggtgaagtgg cttgcgacgc cggcacgatt tggtttgagg
     1141 ggcaagacat cacgcgttgg ccggtggcca aacgggcccg ggcgggtatg agtcgatcgt
     1201 ttcagattaa ttcgctgatt cccgcgttta cggcccgaga gaacgtcttg ctcgcggttc
     1261 aggctgcgcg tggacacaac ttttactttt ttaaacccct tgccagccag actgatttgc
     1321 ttaatgaagc cgatgagttt ttagcgcgtg tcgggcttga acagcatgcc aatgacctgg
     1381 ttagtgaact ggcctatgga cagcaacgac tcgtcgaggt ggcgattgcc atggccagcc
     1441 atcccaagct gttgttgctt gacgagccca tggctggttt ggggccaacc gagtctgagc
     1501 gcatgattga attgcttggc aggttgcgcc aagactatgg ca
//
LOCUS       DATBNL010000793         1521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29415, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000793 DATBNL010000000
VERSION     DATBNL010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29415"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VIC30_13480"
     CDS             <1..263
                     /locus_tag="VIC30_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805428.1"
                     /translation="DVCDQGPGIAQDDIERVLKPFSRGETARTGSAGAGLGLSIVQRL
                     LARADGNLALMVAQPNGLIARMDLPRARSRGKAQTKKGGLNS"
     gene            complement(260..754)
                     /gene="ispF"
                     /locus_tag="VIC30_13485"
     CDS             complement(260..754)
                     /gene="ispF"
                     /locus_tag="VIC30_13485"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005018855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEY7805429.1"
                     /translation="MSQVPFRIGQGFDVHALEPGGPLLLGGVEIDHTHHLKGHSDADA
                     LLHAITDALLGAAGLGDIGRLFPDNDPTYAGIDSRLLLRQAYGRVQQAGWQAVNIDAT
                     IHAQAPKIAPHAPAMVSNIAEDLGLPVDAINIKGKTNEGLGYLGRREGIAVTTVALVA
                     RIED"
     gene            complement(751..1494)
                     /locus_tag="VIC30_13490"
     CDS             complement(751..1494)
                     /locus_tag="VIC30_13490"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015041783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEY7805430.1"
                     /translation="MTVIHGLIPAGGVGARALSAQSVSAPSLSSVPTQPLPKQYRLVN
                     GVPMLVHAVNALLADGRVQDVAVGVQTDDPFAHEYLSALARVQVWPTAGATRALTVLQ
                     TLQQVGFADLDWVLVHDAARPGLPNDCLTALIDACLQANQGGLLAMPAADTVKLAREQ
                     PTVNDACASEVESTLDRGRIWLAQTPQMFKVGELKAALSGALKAGVEVTDEASAMEWA
                     GHAPLLVPGSVRNFKVTWPEDFERLGELS"
BASE COUNT          352 a          464 c          388 g          317 t
ORIGIN      
        1 tcgatgtctg tgatcaaggc cctggcattg cccaagacga tattgagcga gtgctcaaac
       61 cattctctag gggtgagacg gccagaactg gcagtgcagg tgcggggctc ggtttatcca
      121 ttgtgcaacg actgctcgca cgggcggacg gcaatctggc actcatggtc gctcagccca
      181 acggtttgat cgcccgcatg gacttgccac gggctcggtc tcgtggcaaa gctcaaacca
      241 agaaaggtgg tttaaacagt taatcctcaa tgcgggcaac aagtgccacg gtagtcacgg
      301 caatcccctc gcgacgaccc aagtaaccca gcccctcgtt ggttttacct ttgatgttga
      361 tggcatccac aggcaagccc aaatcctcgg cgatgttgct caccatggcc ggtgcatgtg
      421 gtgcaatctt gggtgcctgc gcatgaatcg tggcatcgat attgactgcc tgccaaccag
      481 cttgctgcac acggccatac gcttggcgca acagtaggcg actgtcaatg cctgcatacg
      541 ttgggtcgtt gtcaggaaac agtcgtccaa tatcacccag cccagcagca cccagaagcg
      601 catcggtgat ggcatgcagc aaagcatccg cgtccgaatg tcctttcaag tgatgcgtgt
      661 gatcgatctc cacaccacct agtaacaaag gtcctccggg ttctagtgcg tgaacatcaa
      721 acccctgacc gatgcgaaac ggcacctgac tcatgacaat tcccccagcc tttcaaaatc
      781 ctctggccac gtcaccttga aattacgcac tgagcctggc accagcagtg gtgcgtgtcc
      841 ggcccattcc atggcgctgg cctcgtcagt aacttccacg ccggctttga gtgcgcccga
      901 taaggcagct tttaattccc ctaccttaaa catctgcggc gtttgcgcta gccaaattcg
      961 ccctcgatca agtgttgact cgacttcgga tgcgcaagcg tcattgacag tgggctgttc
     1021 acgggccaac ttcaccgtgt cagctgctgg cattgccaac aacccacctt gattagcttg
     1081 cagacacgcg tcaatcaagg cagtcagaca gtcgtttggc aaacccggcc tagccgcatc
     1141 atgcacaagc acccagtcca gatcggcaaa ccccacttgt tgcaatgttt gcaataccgt
     1201 cagcgcacgc gtagctccag cagtgggcca aacctgcaca cgcgccaagg cggacaaata
     1261 ctcatgggca aacggatcat cggtctgcac accaaccgcc acatcctgca cacgcccatc
     1321 cgccagtaat gcattaaccg catgcaccag catcggtaca ccgttaacca agcgatattg
     1381 cttgggtagc ggttgggtgg gcacagatga caatgatggt gcactgaccg attgcgcact
     1441 aagcgctcgt gcaccgacac caccggctgg gataagacca tggatcactg tcattgtgtg
     1501 acccaaccca tggatagggt c
//
LOCUS       DATBNL010000794         2187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_109328, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000794 DATBNL010000000
VERSION     DATBNL010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109328"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1255
                     /locus_tag="VIC30_13495"
     CDS             <1..1255
                     /locus_tag="VIC30_13495"
                     /inference="COORDINATES: protein motif:HMM:NF014804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY7805431.1"
                     /translation="ERRAQMGQAAIEAARAVGYVGAGTVEFIADQQGEFYFMEMNTRL
                     QVEHPVTEMITGVDLVQWQLQVAYGEPLPLTQEALQINGHAMEARIYAEDPDNGFLPA
                     TGRLHFMNLPLTSAKVRIDSSVMQGDDITPYYDPMIAKLIVWGADRESARRQLQRALA
                     QYRILGAHNNIGFLSRLVACDSFVKADLDTALIEREADVLFAPKPATPLQVWALAALA
                     QLLLEKRQAECYAGADRDSPWRMLDGWRMNSERFRPMRLRQTESTLLVLIVPLKDGWQ
                     ITVGDEQLEVRGQHNESHRLEALLGDRRVSTDVVLIDGHWHVFWAGNVFSVQVQTVGD
                     SAFVAQEDTGGLNSPMPGKIIAVLEEEGATVKAGAPLLVLEAMKMEHTIAAPGDGVVT
                     AFHYAVGDQVSEGDLLVAFDQAPPA"
     gene            complement(1450..1710)
                     /locus_tag="VIC30_13500"
     CDS             complement(1450..1710)
                     /locus_tag="VIC30_13500"
                     /inference="COORDINATES: protein motif:HMM:NF024008.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3764 family protein"
                     /protein_id="HEY7805432.1"
                     /translation="MKTFIVTAELSKPYEQWEEGFLDHADLRAEFGIEDVFHGQIEDE
                     ERIVVILRAESQDVLDDLMQTHADEIAQNGHILESTEVIVAI"
     gene            1945..>2187
                     /locus_tag="VIC30_13505"
     CDS             1945..>2187
                     /locus_tag="VIC30_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEY7805433.1"
                     /translation="MINIAENDTIASVLHRAAKAYHPLPLIVVPAHEQRNYLTQGLEI
                     SYGEVAERAQTLAEGYAAAGYGLGHRVGLFLDNRPEH"
BASE COUNT          488 a          581 c          620 g          498 t
ORIGIN      
        1 cgagcgtcgc gcacaaatgg gtcaggcagc gatcgaagct gcccgagccg ttggttatgt
       61 tggtgcgggc accgtcgagt tcatcgccga tcaacaaggt gagttctatt tcatggagat
      121 gaacacccgc ttgcaggttg agcatccggt cacggagatg attaccggcg tggatctggt
      181 gcagtggcaa ttgcaggttg cttacggtga accattgcca ttgactcaag aagcgcttca
      241 gatcaacggg catgcaatgg aggcccgcat ctacgcagag gatccagaca atggtttttt
      301 gccagccaca ggtcggctac attttatgaa cttgccactc acatcggcga aggtgcgcat
      361 cgacagcagt gtgatgcagg gtgatgacat cacgccttac tacgacccga tgatcgccaa
      421 actgatcgtc tggggtgctg atcgcgaatc cgcgcgacgt cagctgcagc gagcgcttgc
      481 tcagtaccgc attcttggcg cacacaacaa tatcggattt ctttcgcggc tcgtggcctg
      541 tgattctttt gtgaaggcag acctagatac cgccttgatc gagcgtgaag ccgacgtatt
      601 gtttgcgccc aaaccggcta cgcccttgca ggtctgggcg ctagcagccc tggcgcaatt
      661 gttgcttgag aaacgccagg ccgagtgcta tgcaggtgct gatcgggatt cgccttggcg
      721 aatgctcgat ggttggcgga tgaacagcga gcggtttagg cccatgcggc tgcgccagac
      781 agagagcacc cttctcgtgc ttatcgtgcc gcttaaggat ggttggcaaa tcaccgtggg
      841 cgatgagcaa ctcgaggttc gcgggcagca taatgagagt catcggctcg aggcgttgct
      901 aggtgatcgc agggtatcaa cggacgttgt gctgattgac gggcattggc acgttttttg
      961 ggctggcaac gtcttctcgg ttcaggtaca aacagttggt gactcagcct ttgtggctca
     1021 ggaggataca ggcggattga actcaccgat gccaggcaag atcattgccg tgttggaaga
     1081 agagggagcc actgtaaaag ccggcgcgcc cttattggtt cttgaggcca tgaagatgga
     1141 gcacaccatc gcagcgcctg gcgatggcgt tgtaacggca tttcattacg cggttggcga
     1201 tcaggtcagc gaaggcgact tgcttgtggc ctttgatcag gcgccacccg cctgagaggc
     1261 tccgctagcg actggcaaat cggcatgtga catatcgctc aggtgtctga tttgttctgt
     1321 tttctgcgat tggtgagtac caatgtccac tggaacccgc tggttctggg caggcaagcg
     1381 tttgtgcctg cgccatcgac aacagactgg acatgatgca caagcagatt gccggcgatg
     1441 gctctcagcc tagatcgcaa cgatgacttc ggtagactcc agaatatgac cgttttgcgc
     1501 gatttcatca gcgtgcgttt gcatcagatc atcaagcacg tcctgtgatt cagcccgcaa
     1561 gatcaccaca atgcgttctt cgtcctcaat ctgtccgtga aagacatcct cgatgccaaa
     1621 ctcggcgcgc aagtcggcat ggtccagaaa tccctcttcc cattgctcat agggtttgct
     1681 cagttccgca gtcacaataa acgttttcat cttatcccct caacagtaaa acggcgtgca
     1741 accttttctt ttggaatact gcccgaatta gatgacagtt ccaatacagc gttcgcgatg
     1801 taatgacgcc tgaaacccac acaaagatca cacaaacagg ctacgcccgc gcttacatcc
     1861 ccgtcctgaa gaacggggct ttacgcgcta aacgggtaag ataagaaaaa acgcttatgt
     1921 gtgtgagcgc tgctatcgac catcatgatc aacatcgctg aaaacgacac catcgcatcg
     1981 gtcttgcacc gcgcggcaaa ggcctatcat ccattgccac tgattgtcgt gccggcccat
     2041 gagcagcgca actatcttac ccaagggctg gaaatctcat acggggaggt ggccgaacgc
     2101 gcgcagaccc tggctgaggg ttatgccgca gccggatatg gactaggcca ccgagtgggg
     2161 ttgtttctgg acaaccggcc ggaacat
//
LOCUS       DATBNL010000795         2756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_59657, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000795 DATBNL010000000
VERSION     DATBNL010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59657"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VIC30_13510"
     CDS             complement(<1..413)
                     /locus_tag="VIC30_13510"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013234649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEY7805434.1"
                     /translation="MNLPSHQLIMTVLMTPDTANFTGNVHGGTILKLLDEVAYACASR
                     YAGKYVVTLNVENVTFREPIHVGELVTFLASINFTGKTSMEVGVKVVAEDIRSQKTRH
                     VNSCFFTMVAVDDDRKPTPVPPLVPSTDAEKRRHQ"
     gene            570..1262
                     /locus_tag="VIC30_13515"
     CDS             570..1262
                     /locus_tag="VIC30_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004574802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY7805435.1"
                     /translation="MNIHADFDHRIALDTTEMPWVDSPSANVKRKMLDRVGQEVARAT
                     SVVRYEPGSSFSAHEHGGGEEILVLDGVFSDEHGDYPAGTYLRNPPGTSHRPRSSAGC
                     TLFVKLWQFTPGDLQQICIDTNEAPWYPGLVAGLSVMPLHEAAGVNTALVRWAPNTQF
                     NRHVHPGGEEILVLDGVFQDENGRYGAGSWLRSPRYSIHTPFTQEEGALIFVKTGHLG
                     APLLELPATASL"
     gene            complement(1257..1946)
                     /locus_tag="VIC30_13520"
     CDS             complement(1257..1946)
                     /locus_tag="VIC30_13520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805436.1"
                     /translation="MQPTFFDKHTNILVSAALVGLVAVTMAYVNLGPASDWWSVSYLS
                     ILGVGGGCFVLSRLRPQRYGFSPPHVMLSLGFGGMLIGLFADFQRTPIAIIASICSSS
                     QSLSVLESLKLHVELMPYMHLGMLVGGLAAIPSLRLLRPECRKLCSMLAQNLLCSGWM
                     FLGMTLGAILFVQVIQQTNNGNLNLSAMLSGMFAGMVWGMVFSVFLYRSYFMWRDRKS
                     QQHLTASSRQS"
     gene            2336..>2756
                     /locus_tag="VIC30_13525"
     CDS             2336..>2756
                     /locus_tag="VIC30_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011488438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY7805437.1"
                     /translation="MIPPEFEYHAPTTLSDAVALLNELGDEAKVLAGGHSLLPMMKMR
                     FAEPAHLIDLNKIDQLRGIREEDGLIKIGAMTVENDILDSAVLQQKASLLPKAVKLIA
                     DPQVRNRGTIGGDIAHGDPANDHPAIMKAMDATFVIAG"
BASE COUNT          698 a          668 c          734 g          656 t
ORIGIN      
        1 tgttggtgcc gtcttttttc agcgtcagtg gatgggacta gcggtggtac tggtgtgggc
       61 ttgcgatcat catcgactgc gaccattgta aagaagcaac tattcacgtg tcgggtcttc
      121 tggctgcgaa tgtcttccgc aactaccttg acgccaactt ccatggacgt cttgccagtg
      181 aaattgatgc ttgctagaaa tgtgacgagc tcaccgacgt ggatgggttc tcgaaacgtg
      241 acattttcaa cgtttagtgt caccacgtat ttaccggcat aacggcttgc acaggcatag
      301 gcaacctcat ctagcagttt gaggatggtt ccgccgtgaa cattgcctgt gaagttggct
      361 gtatccggtg tcatcagaac cgtcatgata agttgatgtg aaggcaggtt catgggtatc
      421 cttgtttaag taagatcgca cgccaatgtg atggcaggct acgacaaggt atggcaaacc
      481 cttacatgtc gatgtacaga tttgggtgag ctaggcgtgt cgttgtagtc tatgccgatg
      541 ataaaccgaa cactgccaaa agatttgcaa tgaatataca cgccgatttt gaccaccgca
      601 ttgcgttgga taccaccgag atgccttggg tggactcacc ttcagctaac gtgaaacgca
      661 agatgcttga ccgagtgggt caagaggtgg ctcgcgcgac ttctgttgtg cgctatgaac
      721 caggttcgtc ctttagcgct catgagcatg gtggtggtga agagatactg gtgctagacg
      781 gtgtgttttc tgatgagcat ggcgactatc ctgcgggtac ttacttacgc aatccgccgg
      841 gcaccagcca ccgtccacgc tcgagcgcgg gctgtacgct gtttgtcaaa ctctggcaat
      901 ttaccccagg cgatctgcag cagatctgta ttgataccaa tgaagcaccg tggtacccag
      961 gtctggtggc gggtctttca gtcatgccgc tacatgaagc cgctggtgtg aatacagcat
     1021 tggtgcgttg ggcgccgaac acgcagttca atcgtcatgt gcacccaggt ggcgaggaga
     1081 ttctggtact cgatggtgtg tttcaggacg aaaatggacg ctatggcgcg ggcagttggt
     1141 tgcgcagccc ccgatacagc attcacacgc cttttacgca agaagagggc gcgctgattt
     1201 ttgttaagac cggacatctt ggagcgccgt tactggagtt gcctgcgaca gcatccctat
     1261 gattgacgcg aactggcggt gaggtgttgt tgggacttcc tatcgcgcca catgaaataa
     1321 ctgcgataca gaaatacgct aaataccatc ccccaaacca tgccagcgaa catgcccgag
     1381 agcatggcgc tcaggttcaa gttgccatta ttcgtttgtt gaatgacctg tacgaacaaa
     1441 atagcgccta gcgtcatgcc taaaaacatc cagccggagc acagtaagtt ttgtgcgagc
     1501 atggagcaaa gctttctgca ctcagggcgc aataaccgaa gactcgggat ggctgcaaga
     1561 ccgcccacca acataccgag gtgcatatag ggcatgagtt caacgtgcag ctttagcgat
     1621 tccaagactg aaagcgattg actgctgctg cagattgagg caatgatcgc aatcggtgtg
     1681 cgttggaagt cagcaaagag accaatcaac ataccgccga agcccaggct tagcatcacg
     1741 tgcggaggag agaatccata gcgctgggga cgcagtcgcg agagcacgaa acacccgcca
     1801 ccaacgccga ggatggacag ataggatact gaccaccagt cgctagcggg ccctaagttg
     1861 acataggcca tggtaacggc caccaacccc acgagtgcgg cacttaccaa tatgttggtg
     1921 tgtttgtcga aaaacgtggg ttgcactctc atctcctcac gccggcaatc aatggcgttg
     1981 ctgatctcaa tttgccgctc aatgtctgct agtgcatatt aaaaaaatct atggacttgc
     2041 ccaaacgcac agctgtactt ttattttttt tgcgatctag aatatatcag cagattaagg
     2101 cagattatcc attgaatcaa gggatgtaag ccagttgtaa tcgttaaccc tatgatgtag
     2161 tgacaattca agtcactagc gctagattaa gtggacgtat aacaaaacaa acctagtgcg
     2221 cagcgctctc atcccttcca gaagtaacta actggttgta ttgtgactgc ttagtacata
     2281 atagaaaaaa actaaatcac cgatcgcaac aacatttgtt gaacaggaga cttgcatgat
     2341 cccgccagag tttgaatatc acgcgcccac cacattgagt gatgccgtgg ctttattaaa
     2401 cgagcttggc gatgaagcca aggtgttagc cggtggccac agtttgctgc cgatgatgaa
     2461 gatgcggttc gcggaacctg cgcacctaat tgatttgaac aagatcgatc agttacgcgg
     2521 gattcgggaa gaggacggac tgataaaaat tggtgccatg acggtagaga atgacatcct
     2581 tgactcagcc gtgctgcagc aaaaggcttc actgttgccc aaggcagtca agcttattgc
     2641 tgacccccag gtgagaaacc gcggcacgat tggcggcgat attgcgcacg gtgaccccgc
     2701 caatgatcat cctgcaatca tgaaagccat ggacgccacc tttgtgatcg ctggca
//
LOCUS       DATBNL010000796         3416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_139185, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000796 DATBNL010000000
VERSION     DATBNL010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139185"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1171
                     /locus_tag="VIC30_13530"
     CDS             <1..1171
                     /locus_tag="VIC30_13530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018311003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY7805438.1"
                     /translation="EDTESDRVVRKASFKGDIPKKARQAVCAFSNDLPGHHKPGVLFV
                     GATDQGEPSLLDITDQLLLSLADIKTDGNILPLPVLSVEKRILKGASMAVVTVLPSDM
                     PPVKYEGRIWIRTGPRRALANEQEERVLNERRRYRNLPFDLHPMPIAELGDLSRVIFE
                     NEYLPRAFADDVLEENGRSYEERLASCRMIVSPTQTTPTVVGLLTLGKSPQDFLPGAY
                     VQFLRINGTELADPVIDEERIGGGIADILRRTEEKLRAHNHTAVDITSRSTHIMSTPY
                     PQVALQQILYNAVLHRTYESTNAPIRVYWFNDRVEIASPGGPYGNVTTENFGCPGITD
                     YRNPNIADVLRTLGFIQAFGRGIATARRTMEQNGNPPPVFETTQTAVVCTLRGKV"
     gene            1168..2190
                     /locus_tag="VIC30_13535"
     CDS             1168..2190
                     /locus_tag="VIC30_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019699878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY7805439.1"
                     /translation="MNPPILTFFNNESGVGKTSLVYHLAWMFASLNKRVVLADLDPQA
                     NLTAACIDEDHIDMVWNASTGGTTMYRCVEPLTAGGDLQEPVLQNLAANLYLLPGDIA
                     LSTFEATLSTEWVSSMGESSLYRPMHILTAFWQVMQMAAKQIQADIVLVDLGPNLGAI
                     NRSVLVATDYVVIPLGVDLFSLQGLKSLGPTLREWRNLWIKRLDNWNNSIDSQPYAGF
                     QLPVGKMQPIGYLCQQQSVRLDRPVKADDKWVRQIPALYRDAVLGESVEPDFETSQAS
                     DPYCLGTLKHYRSLIALGQEHRKPIFDLTSADGAIGSHANAVVDARKDFKQLALKIGA
                     QLGVQM"
     gene            2901..>3416
                     /locus_tag="VIC30_13540"
     CDS             2901..>3416
                     /locus_tag="VIC30_13540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HEY7805440.1"
                     /translation="MITTAEPLEQGVSLSGVQPKLGVIKDRDRYLGRTKDNDTHIIAK
                     LPVVAHPLLPEVEDLSLRLAKAAGVNACDAYLEPLGKLVARHDYDLGEVEQHTNFLAV
                     VRYDRQPSARVHCEDFAQVFGVIPEDKYSNEFSYLQVAEVLLTQPSLAENAVHELLRR
                     ILVNEMLGNPDM"
BASE COUNT          852 a          894 c          863 g          807 t
ORIGIN      
        1 agaagacacc gagtctgatc gggtcgtgcg caaggcctcc tttaagggcg atattccgaa
       61 aaaagcgcgt caggctgttt gtgctttttc caatgatttg cccggtcatc acaaaccagg
      121 tgtgcttttt gtaggtgcaa ctgaccaggg tgaacccagc cttcttgaca tcacggacca
      181 attattgctg tcattagctg acatcaagac agacggcaac atattgccac ttcctgttct
      241 atcagtcgaa aaacgtatcc tcaaaggggc gtcgatggcc gttgtgaccg ttttgccttc
      301 ggacatgccc cccgtaaagt atgagggtcg tatctggatt cgcaccggtc cacgtcgcgc
      361 cctcgccaac gaacaagaag agcgggtctt aaatgagagg cggcgataca ggaacttgcc
      421 atttgatttg catccgatgc ccatcgcaga acttggtgac ctctctcggg tgatatttga
      481 aaatgaatat ttaccgcgtg catttgccga tgacgtgctc gaagaaaacg gtcgcagcta
      541 tgaagagcga ttggcatcat gtcgaatgat cgtctcccca acgcaaacca caccaacggt
      601 cgtaggtttg ctgacacttg gcaaaagccc acaggatttc ttgcccggtg cctatgtcca
      661 attcctaaga attaatggca cggaattagc tgatcccgta atagacgagg aaaggatcgg
      721 tggcggtatt gctgacatac tgcgtcgtac cgaagaaaag ttacgggcgc ataatcacac
      781 cgccgttgac atcacgtcgc gatccacgca tatcatgtcc acaccgtatc cccaggttgc
      841 tcttcagcaa attctctaca acgctgtgtt gcaccgaacc tacgaaagca ctaacgcacc
      901 catccgcgta tattggttca acgaccgtgt cgagattgca agtcctggcg gaccctacgg
      961 aaacgtcaca accgaaaatt ttggctgccc gggcattacc gactaccgca accccaatat
     1021 cgctgatgta ttgcgtaccc taggttttat tcaggccttt ggccgtggca ttgccacagc
     1081 gcgccgcacc atggagcaaa acggcaatcc gccgcctgtt tttgagacga cgcaaacagc
     1141 tgttgtttgc acactgaggg gcaaagtttg aatcccccaa ttcttacgtt ttttaacaat
     1201 gaaagcggtg tcggcaaaac atcgctcgtc taccatctag cctggatgtt tgctagcttg
     1261 aacaaacgcg ttgttctagc tgacttagat ccacaagcca acttgacagc tgcctgtatc
     1321 gacgaagacc acatagacat ggtttggaac gcatcgactg gtggcaccac catgtaccgc
     1381 tgcgttgaac cacttacagc cggtggcgat ctgcaagagc ccgtgctgca aaacctggca
     1441 gctaacctct atttgctgcc tggcgatatc gctctgtcga cattcgaggc cacgctttca
     1501 acagagtggg tcagcagcat gggtgagagc agtctttatc gtccgatgca catactcacg
     1561 gccttttggc aagttatgca gatggccgcc aaacagatcc aagccgacat tgtcctggta
     1621 gatctaggac caaatcttgg cgctattaat cggtcagtcc ttgtagcaac cgattatgtg
     1681 gttattccgc ttggggtgga tcttttctct ctacaaggac taaaaagtct tggtcctacg
     1741 ctcagagagt ggagaaacct gtggatcaaa aggcttgata attggaacaa cagcattgat
     1801 agccaaccat acgctggctt ccaactaccg gtcggcaaaa tgcaacccat cggttatctt
     1861 tgccaacaac agagtgttcg gctcgaccgc cctgtcaaag cagacgacaa atgggtcaga
     1921 cagataccgg ccctataccg ggatgccgta ttaggggaat cggttgaacc tgattttgag
     1981 accagtcaag ccagtgaccc ttactgccta ggtaccctca aacactatcg tagcctcatt
     2041 gcactaggac aagagcaccg aaagcccata ttcgacctga cgtccgctga tggggctatc
     2101 ggtagccacg ccaatgccgt ggtcgacgct cgaaaagact tcaaacaact cgcactaaaa
     2161 attggtgcgc aactaggggt gcagatgtag catcagcaaa ccgtttttca ttgcgcacag
     2221 cactggtgcg agcggctggt ccttgagtgc cctactgtca agaacgaggc ggcatgatgt
     2281 gactgccctt gaggcgcgcc ggtaatgtca tatgcgggta agtgctagct gtcttcaggt
     2341 gttttgcatg agtgcaacag cttgcgctag agctttgcgg gccagagtca acattgattt
     2401 ggcctcctgt tcagtgacag gcggcaaggg tgcacgatat acgtattcgt tacccgtttc
     2461 gcgcgtaaag cccccgttct tcaggacggg gatgtaagcg cgggcgcagc ctacatgtca
     2521 gttttttggt ttttatgtca tcttggtcta tcgtatgctc agtgtctttg atataataat
     2581 tgtcaatctg gaagttaatc gtaaagcctt taaattcagg cccaatccca ccacagagtc
     2641 aagatttaac tgtgttgaat gcggttatac gaaaaacgcc gactcggttg gcgctttaaa
     2701 tgtagctcga gggcatcggg tgctcgcctg tggagttgaa acgttggttt taacgatgaa
     2761 gcaggaacca ttgggaagta gcgatacacg cccaatcttg gccgcttgat aaagccgcta
     2821 ggaatcctcg tcgtttcggg cggggaggac gtcaacgctc gaactgaacg cccaacagct
     2881 cagtgactac atcacaccaa atgatcacaa cagccgagcc attagagcaa ggcgtttcct
     2941 tatcgggcgt gcaacccaag cttggggtca tcaaggatcg tgaccgatac ttgggtcgca
     3001 ccaaagataa cgacacgcac atcattgcca aactacccgt ggtggcacac cccctgctac
     3061 ctgaagtcga agacctgtcc ctaagactag ccaaggcggc cggcgttaat gcttgtgatg
     3121 cctatctgga acctttaggc aaattggtcg ctcgacatga ctatgacttg ggcgaggtcg
     3181 agcaacacac aaactttctg gccgtggttc gatacgatcg gcaaccaagt gctcgggtgc
     3241 actgcgaaga ctttgcacaa gtgtttggtg tcatacctga agacaagtac agcaacgaat
     3301 tctcgtacct acaggtcgcc gaggtgttgc tgactcagcc aagcctggca gaaaatgccg
     3361 tgcatgaact gttgcgccgc atactggtca acgaaatgct gggcaatccc gacatg
//
LOCUS       DATBNL010000797         2643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_99241, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000797 DATBNL010000000
VERSION     DATBNL010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99241"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VIC30_13545"
     CDS             complement(<1..338)
                     /locus_tag="VIC30_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019431308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY7805441.1"
                     /translation="MTNLVRSEYNLMSPPEPSMTTASDTAPLQATFHATPTETESKTP
                     AKVGAQARSETNKQASYLSSDVLIVGAGPAGCAAAITLAQAGVDVLLIDQHDFPRDKV
                     CGDGLIPDAMA"
     gene            439..651
                     /locus_tag="VIC30_13550"
     CDS             439..651
                     /locus_tag="VIC30_13550"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEY7805442.1"
                     /translation="MKLHVPDMTCNHCVASITKAVQSLSADAQVICNLQAHEVDIPNL
                     VEVSPEKVVDALDDIGFEATVIEAEA"
     gene            657..908
                     /locus_tag="VIC30_13555"
     CDS             657..908
                     /locus_tag="VIC30_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805443.1"
                     /translation="MATRSKLRSGTTRFVGALTGLVLYLLVVLIANPGDNDPTSNAGM
                     IWLVVGAALSMVLAAWFLPWVRKRFSARHARRKARLGRG"
     gene            990..1445
                     /locus_tag="VIC30_13560"
     CDS             990..1445
                     /locus_tag="VIC30_13560"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HEY7805444.1"
                     /translation="MFKILVVCTANICRSPAGQQFLRQRLNGKDVIIESAGTLALDGN
                     PADATIREMMIERGHPEIEAHRSRALMPSHLSQYDLVLCMERDHVERVQRLSPYASNK
                     TRLFGQWDGQADVEDPIGRSSATYARALDIMDSMADQWVDKMLMMGMVK"
     gene            1466..2491
                     /gene="galE"
                     /locus_tag="VIC30_13565"
     CDS             1466..2491
                     /gene="galE"
                     /locus_tag="VIC30_13565"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009665400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEY7805445.1"
                     /translation="MANKCVLVTGGAGYIGSHTTVQLLEVGLDVVVLDNLSNSHRTSL
                     ERVKQITGREVKFVQGDVRDRAVLRDVFGKFPISSVIHFAALKAVGESQSQPLRYYDN
                     NITGSLCLFEEMQRASVRSVVFSSSATVYGDQGTGQYREDAPLAPMSVYGRTKRMVED
                     ILRDLVASDPRWQVALLRYFNPVGAHPSGLIGEDPNGIPNNLMPFIAQVAVGKREKLS
                     VFGNDYPTPDGTGLRDYIHVQDLATGHLAALNALEQKTFDTPLTVNLGTGQPYSVLEM
                     VNAFAAAAAKPVAYEVVDRRAGDVAVCYADPTLAKDLLGWQAKLGIDAMCADTWRWQQ
                     MNPDGYR"
BASE COUNT          583 a          639 c          800 g          621 t
ORIGIN      
        1 gccatggcat caggtatcaa cccatcgcca cagaccttgt cacggggaaa gtcgtgctga
       61 tcgatgagca acacatcaac gccggcttga gccaacgtga tggcagctgc acagcctgca
      121 ggacctgcac ccacgatcaa cacgtcggat gaaaggtagg atgcctgttt gtttgtctct
      181 gaccttgcct gcgccccgac cttggccggc gtcttagact cggtctcggt gggtgtggcg
      241 tgaaatgtgg cttgcagtgg ggcggtgtca gaagcggttg tcatcgatgg ctcgggcggg
      301 ctcattaagt tgtattcgga tcgtaccaaa ttggtcatgc cacggatgcg caagtcaggg
      361 tatgcttcgg ttttggggtc gcaagcgcga tgtccagata gaacctcagc attcagatca
      421 gttttacagg gggaccgtat gaaactgcac gtaccagaca tgacctgtaa ccattgcgtt
      481 gctagcatca ccaaagccgt gcagtcattg tcggctgatg cgcaagtgat ttgtaatcta
      541 caggcgcacg aggtggacat acctaatttg gtggaggtct ccccagaaaa agtcgtcgat
      601 gcacttgatg acattgggtt tgaggcgacg gtcatcgagg ctgaggctta gaggtcatgg
      661 caacacggtc gaagctcaga agtggtacga cccggtttgt gggggcgctc acgggtttgg
      721 tgttgtacct attggtggtt ttgattgcca acccgggtga caatgaccca acaagcaatg
      781 cgggcatgat ctggttagtg gtgggtgcag cactgtcgat ggtgcttgcc gcctggttct
      841 tgccgtgggt caggaagcgg ttttctgcgc gtcatgccag gcgcaaggca cgcttaggac
      901 ggggttaggt cccggctagg acgctgaaca ggtcaaacat agacagcaac aagtagcaag
      961 tagaaagcaa caagtcatta ggttatttca tgttcaagat tctagtggtg tgtacggcca
     1021 acatttgtcg cagtccagca gggcagcagt ttttgcgcca gcggctcaac ggcaaggacg
     1081 taattattga gtcggcaggc acgttggcgc ttgatggtaa tccagccgat gcgacgatac
     1141 gcgaaatgat gattgagcgt ggccatccag agattgaagc gcatcggtct cgtgcgttga
     1201 tgccatcgca cttatcgcag tacgacctgg tgttgtgtat ggagcgcgac catgtcgaac
     1261 gggtgcaacg cttgagcccg tacgcatcga acaagacccg actgtttggg caatgggatg
     1321 gtcaagctga tgtagaagac ccgattgggc ggtcatcggc gacctacgct cgagcacttg
     1381 acatcatgga cagcatggcc gaccagtggg tagataaaat gctcatgatg ggcatggtga
     1441 aataacacaa ggtcaggtta ggaacatggc aaacaaatgc gtcctggtaa ctggcggtgc
     1501 cggttacatt ggatcccaca ccacggttca gttgcttgaa gtaggccttg atgtggttgt
     1561 gttggacaac ctgtctaata gccatcgaac cagccttgaa cgtgtgaaac agatcaccgg
     1621 tcgtgaggtg aagttcgtgc aaggtgatgt gcgggatcgc gccgtattgc gtgatgtctt
     1681 tggcaagttt ccaatttcgt cggtgattca ttttgcggcg ctcaaagccg tcggtgaatc
     1741 acaaagccag ccactgcggt attacgacaa caacatcacg ggtagcttgt gcttgtttga
     1801 agaaatgcag cgtgccagtg ttcggtctgt ggtgttttct tcttcggcaa ccgtctatgg
     1861 cgatcaaggc accggtcagt accgtgaaga cgcacccttg gcccccatga gtgtgtatgg
     1921 ccgaaccaaa cgcatggtcg aagacatctt gcgtgatttg gtggcctcgg acccgagatg
     1981 gcaagtagcg ctgttgcgct acttcaaccc cgtgggggca cacccctcgg ggttgattgg
     2041 tgaggacccc aatggcatcc cgaataactt gatgccgttc attgcgcaag tagctgtggg
     2101 caagcgcgag aagttgtccg tctttggcaa tgactatccc acacccgatg gcacgggttt
     2161 gcgtgactac attcacgttc aagatctggc cacgggccat ctggcagcat tgaacgcctt
     2221 ggaacaaaag accttcgaca caccactgac cgtgaactta ggtactggtc aaccctacag
     2281 cgtgcttgag atggtcaatg cgttcgctgc cgcagccgcc aaacctgttg cctatgaagt
     2341 cgttgatcgc cgtgccggcg atgtggcggt ctgttacgcc gatccgacgc ttgccaagga
     2401 tttacttgga tggcaagcca agctcggcat tgacgccatg tgtgccgata cgtggcgctg
     2461 gcaacagatg aacccggatg ggtatcggta gggtgttggt agggtatcgg tagggtatcg
     2521 gtagataggg tgtctgcggt gtttcagcag ttcattgata ggctgcggca aggatccgat
     2581 gacacgatga tgcacggata cacctagtcg ctagtgcact tgctcgcact tagccttact
     2641 tgc
//
LOCUS       DATBNL010000798         3348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_79283, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000798 DATBNL010000000
VERSION     DATBNL010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3348
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79283"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VIC30_13570"
     CDS             <1..462
                     /locus_tag="VIC30_13570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010927442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HEY7805446.1"
                     /translation="EADAQSEITISSSDLRVDTFRASGAGGQHINKTDSAVRLTHLPS
                     GIVVECQDDRSQHRNREKAMQVLAARLKDQQLRQQQSEEAAQRKSLVGSGDRSERIRT
                     YNFPQGRLTDHRINLTLYKLQAIMQGDLDELTGTLIAEHQANQLAALADAV"
     gene            485..1285
                     /gene="prmC"
                     /locus_tag="VIC30_13575"
     CDS             485..1285
                     /gene="prmC"
                     /locus_tag="VIC30_13575"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006227136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY7805447.1"
                     /translation="MQDARLPRLELQLLLAKVVDQRREWLIAHDDHVLTPEQSEQFGS
                     LYVRRLAGEPMAYLLGQREFMGLAFEVNPAVLIPRPETELLVQTALERVAQMRQPRIL
                     DLGTGSGAIAVSLAHARPDATVWATDISDAAMALAKRNAQRHGVVIECHVGNWFEALP
                     VDTLPFDVIVSNPPYIHPDDDHLRQGDLRFEPRQALTEGMDGLSVYRTLTESAAQHLA
                     PGGWLCVEHGFDQSRDINAIFKGAGLQTIETLLDLSGHPRVTAGSYNT"
     gene            1339..1665
                     /gene="grxD"
                     /locus_tag="VIC30_13580"
     CDS             1339..1665
                     /gene="grxD"
                     /locus_tag="VIC30_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003807622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEY7805448.1"
                     /translation="MSDAQTFIKETVANNPVVLFMKGTAQFPQCGFSGRAIQILRDSG
                     VTKLVTVNVLEDEEVRQGIKTYSQWPTIPQLYVKGEFIGGCDILVEMDESGELKQLLG
                     ESGAIA"
     gene            1662..2249
                     /locus_tag="VIC30_13585"
     CDS             1662..2249
                     /locus_tag="VIC30_13585"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016346372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0106141 - flavin prenyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEY7805449.1"
                     /translation="MSDVRRLIVGVTGATGSAYAVRLLQIARTVEDVETHLVVSGAGV
                     LNAHHELGISRGDLHALADYAYAIGDVGASLASGSYRTAGMVVVPCSMRTLASVAIGL
                     ADNLITRASDVTLKERRRLVLAVRETPFNLAHLRNMTAVTEMGGIIFPPLPALYHQPK
                     TIDEIIDHSAARLLELAGIDVPRASWQGLKSEAAD"
     gene            complement(2293..3201)
                     /gene="ttcA"
                     /locus_tag="VIC30_13590"
     CDS             complement(2293..3201)
                     /gene="ttcA"
                     /locus_tag="VIC30_13590"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014752279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEY7805450.1"
                     /translation="MTTTTSPITVHRKADHKSQVDRNKLHKRLLRETGKAIADYQMIE
                     DGDKVMVCLSGGKDSYALLDLLLTLKQRAPISFDLIAVNLDQKQPGFPEEILPNYLTD
                     LGVAFHIEEQDTYSIVKRLIPEGKTTCSLCSRLRRGILYRVASELGATKIALGHHRDD
                     ILATFFLNLFYAARLKAMPPKLVSDDGHHTVIRPLAYVAEADLIRYAEHKQFPIIPCN
                     LCGSQENLKRREVGEMLKAWERQHPQRIWNAFNALATVVPSHLMDRSLFDFANLRPDG
                     QTKPDGDLAFDPETLETPLSVTQLDE"
BASE COUNT          714 a          846 c          993 g          795 t
ORIGIN      
        1 gaggccgatg cgcaaagcga gatcaccatt tcttcatcag acctgcgtgt cgacacgttt
       61 cgagccagtg gggcgggtgg tcagcacatc aacaaaacag actccgcggt gcgtctgacg
      121 cacctgcctt caggtatcgt ggtggagtgt caggatgacc gatcgcagca tcgtaaccgc
      181 gagaaagcca tgcaggtgct cgccgcccgt ttaaaggatc agcagttgcg tcagcagcaa
      241 agcgaagagg cggcccaacg taaaagcctg gtgggttctg gcgatcgatc cgagcgtatc
      301 cgcacttaca acttcccgca agggcgttta acagaccacc gcatcaactt aacgctctac
      361 aagctgcaag ccatcatgca aggtgacctt gacgaactaa caggcacatt aattgccgag
      421 caccaagcta accagttagc agcattggcc gatgcggttt gaaggtttca cgatcaggtg
      481 ctgtttgcaa gacgcacgct tgccgcgtct agagcttcag ctgctgctag ccaaggtggt
      541 agaccagcga cgtgagtggc ttattgccca tgatgaccat gtgttgacgc ctgaacaaag
      601 tgagcagttt gggtctttgt atgtgcgccg tttggccggt gagcctatgg cgtacctgct
      661 agggcagcgc gagtttatgg gtttggcgtt tgaggtcaac ccagctgtgt tgattccccg
      721 ccctgaaacg gagttgttgg tgcaaaccgc gctcgagcgc gtggcgcaaa tgcgtcagcc
      781 gcgtattctg gatctgggca cgggtagcgg cgccattgcc gtgtccttgg cgcatgcccg
      841 gcccgatgcc actgtttggg caactgacat cagtgatgca gccatggcgt tggccaaacg
      901 caatgcgcaa aggcacggtg tggtaatcga gtgccatgtg ggtaattggt ttgaggcgtt
      961 acccgttgac acgctgccat ttgatgtcat cgtctccaat ccaccctaca ttcatcccga
     1021 tgatgaccat ttaaggcaag gggacttacg gtttgagccg cgccaagccc tcaccgaggg
     1081 catggatggg ctgtctgtct accgcacgct aactgagtca gcggcgcaac acctggcgcc
     1141 aggtgggtgg ctctgtgtcg agcatgggtt tgatcagagt agggatatca atgctatttt
     1201 taagggtgct gggctacaaa ccatagaaac cttgttagat ctgtcgggtc acccacgagt
     1261 gacggcaggt tcttataata cgtaattatg cgtggtgagt ccacgcagtt gttcaatcga
     1321 atgtaaggat accgagccat gtcagacgct caaacgttta ttaaagaaac cgtggccaat
     1381 aacccggtgg tgttgtttat gaaaggcacc gcgcaattcc cccagtgcgg cttttctggt
     1441 cgtgccattc agattcttcg cgacagcggt gtgaccaagc tggttaccgt gaacgtccta
     1501 gaggatgagg aggttcgtca gggaatcaag acctattcac agtggcccac catcccacag
     1561 ctatacgtca agggtgagtt tattggtggc tgtgacatcc tcgtcgagat ggatgagagc
     1621 ggtgaattaa agcagctgct cggagagtcg ggcgccatcg cgtgagcgat gtccgtcgtt
     1681 tgatcgttgg cgtcaccggc gccacaggat cagcctatgc ggtgcggctg ctgcaaatcg
     1741 cacgcaccgt tgaagatgtt gaaacgcatc tcgtggtgtc tggcgccggt gtgcttaacg
     1801 cccaccatga actcggtatc agtcgtggcg atctgcacgc gttggcggat tacgcttacg
     1861 cgattggcga tgttggggca tctttggcca gtgggtctta tcgtacggct ggcatggtag
     1921 tcgtgccgtg ctctatgcgc acgctcgctt cggttgccat cggtctggct gacaatctca
     1981 tcacgcgggc ctctgacgtt actttaaagg aacgtaggcg tttagtgctt gccgtgcgtg
     2041 agacaccatt caatctggcg cacttgcgaa atatgacggc agtcaccgag atgggtggca
     2101 ttatcttccc accactgccc gcactctacc atcaacccaa gacgatcgac gagatcattg
     2161 atcactcagc tgcgcgtttg cttgagctag caggtatcga cgtgcctagg gcaagttggc
     2221 agggtttgaa atctgaggcg gcagactagg tcgtattggc ttggcatgac gaaagaaaag
     2281 gaccagtcgg tcctactcgt ctagctgagt tactgacaac ggggtctcca gtgtttccgg
     2341 atcaaatgcc agatcgccat ctggcttggt ttgcccgtcg gggcgcaggt tggcaaagtc
     2401 aaataagctc ctgtccatca aatgcgatgg caccaccgtc gccaaggcat taaaggcatt
     2461 ccagatgcgt tgtgggtgct ggcgctccca agcctttagc atctcaccga cttcacgacg
     2521 tttgaggttc tcttgtgagc cgcataggtt gcaagggatg atggggaact gtttgtgttc
     2581 ggcgtagcga atcaggtccg cctcggcgac ataggctagc ggccggatga cggtgtggtg
     2641 gccatcgtct gatacgagct tgggcggcat ggctttgagc ctagcggcat aaaacagatt
     2701 cagaaaaaac gtcgctagga tgtcgtcacg gtgatgtccg agtgcgattt ttgtggcgcc
     2761 aagttcgcta gcgacgcggt agagtatgcc gcgccgaaga cgcgaacata gcgagcaggt
     2821 ggttttgcct tccggaatga gacgtttgac gatcgagtac gtgtcttgct cttcgatatg
     2881 aaaagccaca cccaggtcag tcaggtaatt gggcagtatt tcttcaggaa agccaggttg
     2941 tttttgatcg aggttgacgg cgatgagatc aaacgaaatc ggggcacgct gctttaaagt
     3001 gagcaagaga tccagtagcg catacgaatc tttgccgcca gacaagcaaa ccatgacctt
     3061 gtcgccatct tcgatcattt gatagtcggc gatggccttg cccgtttcac gtagcaagcg
     3121 tttgtgcagt ttgttgcgat ccacttgtga tttgtgatca gccttacggt gcacggtgat
     3181 aggcgaggta gtggtcgtca ttgatcgagg gcctcactca gctcgttttt tgttgacttc
     3241 gattgccacg ccggccgaat cggcaaaggc cgacggtttg gtgatacgca cggtcacctc
     3301 gcgggtttcc gcgaaggcac tgagtagctc gtcggcgacc ttgtctgt
//
LOCUS       DATBNL010000799         5782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_178721, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000799 DATBNL010000000
VERSION     DATBNL010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 5782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5782
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178721"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..399)
                     /locus_tag="VIC30_13595"
     CDS             complement(190..399)
                     /locus_tag="VIC30_13595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805451.1"
                     /translation="MFAKVMTPDNTTVAVNVTHVRAIYEVHTKRCNIAFSDSDKTLAV
                     NMGIDEAIAALTPQPASTRARKMTQ"
     gene            complement(411..1010)
                     /locus_tag="VIC30_13600"
     CDS             complement(411..1010)
                     /locus_tag="VIC30_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805452.1"
                     /translation="MPLMLSSGEGKPYIRFSPSINSWEMSSPDGRTEFTWDAPAVFDL
                     QGLQLGWMKIDTVGRDWLPWASINQRAAQPEEKDASGNPAYKIGFAINVVSNKLFGDE
                     PVREFSANTFGCLTFIQELYNQCETAPEFKAGQVPVVQITGAKAQKVGKGNTRIPEFN
                     VVKWVDRPSDLDGGESAPVVQAAPQPAQAAPAPAQDDEF"
     gene            complement(1016..2029)
                     /locus_tag="VIC30_13605"
     CDS             complement(1016..2029)
                     /locus_tag="VIC30_13605"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEY7805453.1"
                     /translation="MPLLPLNPFKDLEETEFWDDVGIRMRLKSALKKNEWGFEFKNPI
                     RKVKRMNPFSHHGVAHLSPSAVNMFTGSPSAWIAKALLGYKFKSGPAMWRGLAVEDAI
                     SDYIFKGASPDDCIGIAKDKFDKLKGAVNLSPDVERERERLDRYVINGIDSILELDNE
                     FGVGQPQLPPSNTTFNGQWEVGLPCRFGDQHDEKIDVIGYLDFLYANDAGKHTIIDLK
                     TTARIPSEWPVHHAMQAAFYKRAHGNSPDVYFVYVSPKEEGKPNAYHILKLDDETYNR
                     ELKRMKDTIVRMSKLLTLSDDPFVLAEAIPHDETTFYWSGEKPLSQIIEDVKTAIENT
                     AKE"
     gene            complement(2035..2622)
                     /locus_tag="VIC30_13610"
     CDS             complement(2035..2622)
                     /locus_tag="VIC30_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008648344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEY7805454.1"
                     /translation="MKVLVACEYSGRVREAFRARGHDAWSCDLLPSDDDSYFHFQRDA
                     LEILDHGWDLLIAHPPCTYLSNAGAKHLYPTKGNLNLERYGKGLEARSFFMRFLESDI
                     PKICVENPIPSKVFEMPPYTQFVQPFEHGHPVSKKTCLWLKGLDPLKPTNIVEKTENC
                     HGAEGSWYNKGGKDRWKRRSQTFQGIANAMADQWG"
     gene            complement(2645..2857)
                     /locus_tag="VIC30_13615"
     CDS             complement(2645..2857)
                     /locus_tag="VIC30_13615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805455.1"
                     /translation="MIYTARKGTKVKVAAKIVWPTQWDQEYFADRIATLGGNTWKVDM
                     SCGDRVMIKVGDDFKIIPKYALDRAA"
     gene            complement(2949..3185)
                     /locus_tag="VIC30_13620"
     CDS             complement(2949..3185)
                     /locus_tag="VIC30_13620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805456.1"
                     /translation="MRRHEHYDAIIAFAEGHELEFRPKPDATPYGSTDDWYACDNPDF
                     HPNFEYRVKGSRDPQLQAEIERLNIIAKMHEDSD"
     gene            complement(3178..3366)
                     /locus_tag="VIC30_13625"
     CDS             complement(3178..3366)
                     /locus_tag="VIC30_13625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805457.1"
                     /translation="MKTKTFLKAEEAVKYAHSCQQGGYDCALVVNKFSVVVCELDNLS
                     SVITGDEHIEYFRFKADA"
     gene            complement(3425..3910)
                     /locus_tag="VIC30_13630"
     CDS             complement(3425..3910)
                     /locus_tag="VIC30_13630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805458.1"
                     /translation="MSIVLGVDVGISGAVAVLVGGKLVEVFDMPTVSKVVSGKKRTRI
                     DARELFELVNMYKVNHAFVEMVAARPNQGVSSMFAFGQASGIAEGVCASVTPNVTGVR
                     PQTWKKHFRLTSDKGRSREMAKEIWPELADRFKRVKDDGRAEAALIGLWGYQCILPSK
                     R"
     gene            complement(4582..4881)
                     /locus_tag="VIC30_13635"
     CDS             complement(4582..4881)
                     /locus_tag="VIC30_13635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805459.1"
                     /translation="MDFRSMIEALRLRQKKVAPRLEPTYYAVVRYNPHLKEWDVNRYD
                     NEGIELAHERHALQGAARYIAKTWMDMYNVTRVYVYQMDGKLKDVLMQGDKEFVK"
     gene            complement(5012..>5782)
                     /locus_tag="VIC30_13640"
     CDS             complement(5012..>5782)
                     /locus_tag="VIC30_13640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805460.1"
                     /translation="FAPNLVNQPLTVGGKVAVMPYDSFQRSPQQMFGYGGLTAAPYSP
                     NAISFQGGAPAASFNPLGAPAISQFDMGRAPTPAGVPDDRSFFDRVGENLGNMFNRQE
                     QRAGVFNPATGTFQTFDGQTTLAKTSDNMLADFAVNALNPFSGLTGFVDTKTYQPLAG
                     GENMQYSNFSGGLLSGMIGENLVPFSELEAGSAQMSDGGGSDQPFIIPTEVAQTDPET
                     GEPTAFPTFAPRRFEYQPYVGQFYTIPSRFTRPVSLLG"
BASE COUNT         1291 a         1604 c         1341 g         1546 t
ORIGIN      
        1 catctcgtct tcgtcaaaaa gaccaaacgc ataagatatt gaaggcatcc gcttcgcgta
       61 atgtatcccg agtatgtatg gcttcgtttg ctcatacgct attcgcttaa ttttgtatcc
      121 cataaatcca ccgagcattg tttcttgttg tcgaaaaaag tccccccgaa gggggacaat
      181 gcacacgcat tactgcgtca tcttccgcgc tcgagtggaa gcaggttgag gtgtcaatgc
      241 ggcaatcgcc tcatcgatac ccatgttcac cgcaagcgtc ttatcgctat cgctaaacgc
      301 gatgttgcaa cgcttggtgt gtacttcgta tatcgcccgc acatgggtca catttactgc
      361 gactgtcgtg ttatcgggcg tcatgacttt tgcaaacatg atgctgtcct ttagaactcg
      421 tcatcttgcg ccggtgctgg cgcggcttgt gcaggttgtg gtgcagcttg cactacaggc
      481 gcagattcgc ctccatccaa atccgatgga cgatcaaccc acttcacgac gttaaactca
      541 ggaatacgcg tgttgccctt cccgaccttc tgcgccttag ctccggtgat ctgtacgacg
      601 ggaacctgtc ctgccttgaa ctccggtgcg gtttcgcatt ggttgtacag ctcttggata
      661 aacgtcaaac atccaaaggt gtttgcgctg aactcgcgga cgggttcatc gccgaacagc
      721 ttgttgctga caacgttgat cgcaaagccg atcttgtatg ctgggtttcc gcttgcatcc
      781 ttttcctcgg gttgcgcagc gcgttggttg attgacgccc acggaagcca atcacggcct
      841 actgtgtcaa tcttcatcca gcccaactgc aatccttgca gatcgaacac cgcaggtgcg
      901 tcccaagtaa actcggtacg accgtctggt gaactcattt cccatgaatt gatcgatggg
      961 ctgaaacgaa tgtaaggctt tccctcaccg cttgataaca tcaatggcat atcttttact
     1021 cctttgctgt gttttcgatt gccgttttca cgtcttctat tatctgactc aggggcttct
     1081 cccctgacca gtagaaggtt gtttcgtcat gcggaatcgc ttccgcaagc acgaatggat
     1141 cgtcgctgag agtcagcaac ttgctcatgc ggacaatagt gtccttcatg cgcttcaatt
     1201 ctctgttgta ggtttcgtcg tccaacttca ggatgtggta cgcgtttggc ttaccctcct
     1261 ccttcgggct aacgtacaca aagtacacat ctggactatt tccgtgtgcg cgtttgtaaa
     1321 atgcagcctg cattgcgtgg tgcactggcc actcactcgg gatgcgggct gtcgttttta
     1381 aatcaatgat ggtgtgctta cccgcgtcgt tcgcgtacaa gaaatccaga tacccaatca
     1441 cgtcgatctt ttcgtcgtgt tgatcgccga accgacatgg aagtccgact tcccactggc
     1501 cgttgaacgt ggtgttactg ggtggcaact gcggttgccc cacgccgaac tcgttgtcca
     1561 gctcgagtat ggagtcgatg ccattaatga cgtagcgatc gaggcgctcg cgctcgcgct
     1621 caacgtcagg cgatagattg accgcgcctt tcagcttatc gaacttgtct ttagcgatac
     1681 cgatgcaatc gtctggcgat gcacctttga aaatgtaatc gctgatcgcg tcctcgactg
     1741 cgagtccacg ccacatcgct gggccgcttt tgaacttgta acccagcaac gccttggcga
     1801 tccatgccga cgggctaccg gtgaacatat tcaccgccga aggcgaaagg tgtgcaacac
     1861 cgtgatggct aaaaggattc atacgtttga ctttccttat ggggttcttg aactcgaacc
     1921 cccattcgtt tttcttgagt gcagacttta accgcatccg aatccccacg tcatcccaaa
     1981 attcagtttc ttctaaatct ttgaacggat tgagtgggag aagcggcact taaattaacc
     2041 ccactgatct gccatcgcgt tagcaatgcc ttgaaaagtt tgcgatcttc ttttccaacg
     2101 atccttgcca cctttgttgt accaacttcc ttcagcaccg tggcaattct ctgttttctc
     2161 aacaatgttt gttggcttca aagggtctaa acctttaagc cacaagcatg ttttcttgga
     2221 cactgggtgt ccatgctcaa acggttgtac gaactgcgtg tatggcggca tctcaaacac
     2281 ctttgacggg atcggatttt ctacgcaaat cttaggtata tcggattcga ggaatctcat
     2341 aaagaacgac cgtgcctcta acccctttcc gtatctttcc agattgaggt ttccttttgt
     2401 cgggtataga tgcttcgcgc cagcgttact cagatatgtg caaggcggat gagcgatcaa
     2461 taagtcccag ccatgatcga ggatttctaa cgcgtcacgt tggaaatgga agtaagaatc
     2521 gtcatcgcta ggtagaaggt cgcaactcca agcgtcgtgc ccccttgcgc ggaacgcctc
     2581 tctgacgcgt ccggaatact cacaagcaac taagactttc atttttatcc ccctcgaagg
     2641 cctcttacgc ggcccgatcc aatgcgtact tgggaattat cttgaagtcg tcacccactt
     2701 taatcatcac gcgatcaccg catgacatat caactttcca agtgttgcca cctaaggttg
     2761 cgatgcggtc agcgaaatac tcttgatccc attgtgttgg ccaaacgatt ttcgctgcaa
     2821 cttttacctt ggttcctttg cgtgctgtgt agatcatctt tactctcctt tggccccgtt
     2881 ggccgtgttt cgatatgggt agattactag gttctgtacc aaatgcaaca cttttcgaga
     2941 aaaaaatatc agtcgctgtc ttcgtgcatc ttggcaatga tgttcagccg ttcgatttcc
     3001 gcttgaagct ggggatcgcg tgaccctttc acccgatact cgaagttcgg atggaagtct
     3061 gggttatcgc acgcatacca atcatccgta cttccgtatg gcgtggcatc gggtttcggc
     3121 ctgaactcca gctcgtgacc ctctgcaaac gcaataatcg catcgtaatg ctcgtgccta
     3181 cgcatctgct ttgaaccgaa agtattcgat atgctcgtca cccgtgatga cgctcgagag
     3241 gttatccaac tcgcacacca cgacagagaa cttgttcacg accaacgcac aatcgtagcc
     3301 accttgttgg caactatgcg catacttcac cgcttcttca gctttcaaaa atgttttcgt
     3361 tttcatttct ctttatccag taacaaccac attgcgcaga cgaaccccgt cagaatcatc
     3421 aggttcaccg cttgctcggt aagatacatt gataccccca taagccgatc aacgcggctt
     3481 cagctcgtcc atcatccttg acccgtttga agcgatccgc cagttcgggc catatctctt
     3541 tcgccatctc gcgcgaccgt cctttgtcgc tagtcaagcg gaagtgcttc ttccatgttt
     3601 gcgggcgaac gcctgtcacg ttcggagtga ctgacgcgca cacgccttcc gctatcccac
     3661 tggcttgtcc aaacgcgaac atcgaactga cgccttggtt tggacgcgct gccaccattt
     3721 cgacaaacgc gtgattcacc ttgtacatgt tcaccagctc gaacaactca cgcgcatcaa
     3781 tgcgtgttcg tttcttgccg gatacgacct tggaaaccgt tggcatgtcg aacacctcga
     3841 caagtttgcc gccaaccaac actgcgactg ctccactgat tcccacgtcc acgcctaaga
     3901 cgatgctcaa gtcgtctcag ctccgataga tagtttttca atagcatccc tgatagcagt
     3961 gacacttgcc tttcgtggtg cagaaacgtt ctgtaaccat cgccaaaaag tagccctgct
     4021 aacacccgct tcagacagca ccttcgcacg cttcagcccc tttgcgttta tttcgtttag
     4081 tagcttagaa gctacaacca ttggttcgtt ggtattcaaa aagataaccc cgtttttgtt
     4141 cccactgagc taatacattc gcggtagaac ttgttcgact ccgtatcggg atcgtgacgc
     4201 ggttcttgat acaccagatc gacaagctcc aagaacgcta ggcggatact ttcatcgact
     4261 cgctggatca cgcgataccg catctctctc cgcgatacac ctgagtcacg ctgtgtcgct
     4321 attgtgtaca cagcgtctgc aagtgcttcg cattgatcgt ttgcatagct aggcgttgct
     4381 aagaccaaca ccaaacccat cacaagtgct ttcatttaat gcaccactca gcatatttgc
     4441 cttcgtaatc aggccaatga ccatcgcgca ccatcttgca gtattcggat tgcgcggcct
     4501 tcgcctcctg ataatccgat tgtcccactg ttccaagtag aactaaagcg cacagtaacc
     4561 cagcgcagaa catcatcatt ttcatttcac aaactcctta tcgccctgca tcaatacgtc
     4621 tttcaacttg ccgtccatct ggtagacgta aacccgcgtc acgttgtaca tgtccatcca
     4681 cgtcttcgcg atgtaacgcg ctgcgccttg aagggcgtga cgctcatgcg ctaattcgat
     4741 cccttcattg tcatagcgat tcacgtccca ctccttcaag tgtgggttgt agcgaaccac
     4801 tgcgtagtac gttggctcca agcgcggagc gacctttttc tgcctgaggc gtaacgcctc
     4861 gatcattgaa cgaaaatcca tatattcccc ctttggtatt cgtttcagcc cgtagactaa
     4921 tcggcctttg tttcatttgc aacactttag ggtaaaaaat accccaccga agtggggcga
     4981 agccaccgta caggggagta cggcgaggga attagcctaa gagtgacaca ggtcgagtga
     5041 atcgtgaagg gatcgtgtag aactgcccga cgtatggctg gtactcaaaa cgacgcggtg
     5101 cgaatgtcgg gaaagccgtt ggctcgcctg tctctggatc ggtctgcgca acttccgttg
     5161 ggatgatgaa cggctgatcc gatccaccac cgtcgctcat ctgcgcgcta cctgcttcaa
     5221 gttcagagaa cggaacaagg ttctcgccaa tcatcccgct taacaggcca ccgctaaagt
     5281 tgctgtactg catgttttcg ccaccggcca atggctgata cgtttttgta tccacgaagc
     5341 cggttaaacc agaaaacgga ttgagcgcat tgactgcaaa gtctgcaagc atgttgtcgc
     5401 tggtctttgc gagagtcgtt tgcccgtcaa atgtttggaa tgtccctgtc gctgggttga
     5461 atacgcctgc acgttgttct tgacggttga acatgttacc gaggttttca cctacgcgat
     5521 caaagaaact gcgatcatca ggtaccccag caggcgttgg cgcgcgtccc atgtcgaact
     5581 ggctgatagc tggcgcgcct aacggattaa aagacgcagc aggcgcaccg ccttggaatg
     5641 aaatcgcgtt aggtgaatac ggtgcagccg ttaatccgcc ataaccaaac atctgttgcg
     5701 gcgaacgttg aaaggagtcg tagggcatca cagcgacttt gccgccaacg gttaaaggtt
     5761 ggttgactaa gttcggcgca aa
//
LOCUS       DATBNL010000800         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_119157, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000800 DATBNL010000000
VERSION     DATBNL010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119157"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VIC30_13645"
     CDS             <1..181
                     /locus_tag="VIC30_13645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805461.1"
                     /translation="NDPQETQNLAVNLSANAELILALNAQLNQLIEREVGQDNGSFLH
                     FSDWINWSNGAIMNS"
     gene            197..2032
                     /locus_tag="VIC30_13650"
     CDS             197..2032
                     /locus_tag="VIC30_13650"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY7805462.1"
                     /translation="MKNNQHVLGDRRDFLKASGALATSAIVASPSVSKASPDSSTSIS
                     GGSQSKFPSAQAPGSRDGGYNIVFILTDQEQYMGDGWPIPLPGHERLKRDGMYFENHH
                     ISADMCSASRAVIYTGLHMPHNGIFDNAGVPYMQSLNAKLPTIGKALRKIGYYPAYKG
                     KFHLNTAMAIENHPSDIKTLFESLMDENYGFYDYTGVGDFIEGPLGGYQYDQITSAQA
                     IQWLKSKGQSMASEKQPWFLAVNLVNPHDVMWVDTDKPGDDAQRKQAMLPIAPVPKDK
                     NYTQEWNDIALPQTWQQPLDAPGRIPAHRIYHDANAVLTGMIPNDERPVRVRQNFYFN
                     SIRAADEQISAVLDALDDLGLTENTIVIFTADHGELLSSHGGLTGKGTTAYKEQNHVP
                     MIVMHPAYPGGRSCKELTCHLDILPTVVGMTQKNVEPIKDMMALMKGRDISGLLAKPD
                     SPAFSADREAVLFCYSQLMVHDPAFTKLLYTVVDDKSVSRLDQFKKIEDFPIDWSLRV
                     AIRSIFDGRYKFSRYFSFRNFNTPQTMQELLSNNDIELYDTWQDPNETDNLAARFDQH
                     RDLIDQMNQKMNRVIGREIGRDDGSFLPLKNWINWDGVQPTHLNI"
BASE COUNT          578 a          524 c          468 g          469 t
ORIGIN      
        1 caacgaccct caagagacgc aaaatttagc cgtcaatctc agcgcaaatg cagaacttat
       61 cctggcactc aacgcgcaat taaaccagct gatcgagaga gaagttggtc aagacaatgg
      121 ttctttttta catttttctg attggatcaa ttggtccaat ggcgccatca tgaactctta
      181 agtgtcgagg tcacgcatga aaaataatca acatgttctt ggcgaccgcc gagattttct
      241 taaagcatct ggcgcactag caacgagcgc tatcgtggcg agcccatccg tcagcaaagc
      301 atcacccgac agctcgacgt caattagcgg cggtagtcaa tccaagttcc cgtcggctca
      361 agcgccgggg tcgcgcgatg gtggttacaa catcgtattc atcctgacag accaagaaca
      421 atacatgggt gatggttggc caattccact gccaggtcat gagcgtctca aacgtgacgg
      481 aatgtatttc gaaaaccacc acatcagtgc tgatatgtgt tcggcctcgc gcgcggtcat
      541 ctatacaggc ctacacatgc ctcacaacgg catttttgat aatgccggcg tgccgtatat
      601 gcagagcctc aacgccaaat tacctaccat tggcaaagct ctgcgcaaga tcgggtacta
      661 cccagcctac aagggtaagt ttcaccttaa tacagcgatg gccattgaaa accatccctc
      721 tgacatcaaa accctgtttg agagcctgat ggacgaaaac tatggcttct atgactacac
      781 aggtgttggt gactttattg aaggtccact tggtggttat caatatgatc aaatcacatc
      841 ggcgcaagct attcaatggc tcaagtccaa gggtcagtcg atggccagcg aaaagcaacc
      901 gtggtttcta gcggttaatc tcgtcaaccc gcacgacgtc atgtgggttg acacagacaa
      961 acccggagac gatgcacagc gtaagcaagc tatgctgccg attgctcctg tgccgaaaga
     1021 taaaaactac acccaagaat ggaacgacat tgcgttgcca caaacttggc agcaaccact
     1081 agacgcacca ggtaggatac ccgcgcatcg gatttaccac gacgcaaatg ccgtactgac
     1141 gggcatgatt ccgaatgacg agcgaccagt tcgcgtcaga caaaactttt acttcaacag
     1201 catacgtgct gctgatgaac agatcagtgc ggtacttgac gccttagatg accttggcct
     1261 cacagaaaat accattgtca tatttactgc tgatcacggt gaactgcttt caagtcatgg
     1321 tggcctgact ggcaaaggca caaccgccta caaagaacaa aaccacgtgc cgatgatcgt
     1381 catgcatcct gcataccccg gtgggcgcag ctgcaaagaa ctcacgtgtc acctcgatat
     1441 actgcccacc gtagttggga tgacgcaaaa aaacgttgaa ccgatcaaag acatgatggc
     1501 cctgatgaaa ggcagagata tcagtgggct tctggcaaag cccgactcac cggcgttctc
     1561 cgcagacagg gaggctgtcc tattttgcta cagtcaacta atggtgcatg acccagcctt
     1621 caccaagcta ctctataccg ttgttgatga caaatcagtg tcgcgccttg atcagttcaa
     1681 gaagatcgaa gattttccaa ttgattggtc tcttagagtt gcgatccgta gcatttttga
     1741 cggtcggtat aaatttagcc ggtatttttc gttcaggaac ttcaatacgc cgcagaccat
     1801 gcaagaattg ctctccaaca acgatatcga gctctacgat acatggcaag accccaatga
     1861 gactgacaac ttagccgcac gattcgacca acacagagac ttgattgatc agatgaacca
     1921 aaaaatgaac cgggtgattg gtcgagaaat tggtagagac gatggcagct ttttacctct
     1981 taaaaactgg attaattggg acggagtaca gcctacccac cttaatatct aaacttgtc
//
LOCUS       DATBNL010000801         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_19367, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000801 DATBNL010000000
VERSION     DATBNL010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19367"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VIC30_13655"
     CDS             <1..249
                     /locus_tag="VIC30_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805463.1"
                     /translation="NMYCRKYMDAHPELISHYKTDNEHFITDVDTEEDLAAFEKKWGF
                     ELTLPNLAQCATDGDGPTPEGTHEPAYIALRKRFAVPQ"
     gene            246..923
                     /locus_tag="VIC30_13660"
     CDS             246..923
                     /locus_tag="VIC30_13660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019429889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative 2OG-Fe(II) oxygenase"
                     /protein_id="HEY7805464.1"
                     /translation="MSGLHWPVPLQIHAFDQASDINPTLACAFMAMRATDTTQAGDKA
                     FYASHDQLLARVQLPEFDALIKFIVGSLQKTISQANAGVWPPGKMQLQLQLAGCWFQI
                     QNGMSFHDVHTHGNCSWSGVYYVQCDDHEKRRAHPALGEMNGVTRFYGPYTNWLSGAY
                     MDVGNAYLQRNTLDIEPEPGRLVLFPSYVPHKAMPYEGETDRVIVSFNVQVHSPAGDQ
                     MFAYEAT"
     gene            complement(957..>1816)
                     /locus_tag="VIC30_13665"
     CDS             complement(957..>1816)
                     /locus_tag="VIC30_13665"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY7805465.1"
                     /translation="LALVDCANFTTAASLRNVSQPAFSRRIQALETWLGVELIDRSKK
                     PFRFTPTANEHETAIRNLVNQIYQVRNETQSSTQDRITLTLAAQHSLLVSSFLPHFLD
                     KLAASIKNLNYRVISENMDTCTALFLKGEVDMLVAYETEDNPNAIPPHLSISKKLGSD
                     EMILVAHPSVVKHGRVRGQRQHLPLLTYPVSSFFGGIVWAEEVPRVLREQNATIACES
                     AFAVGLREMALAATGAAWLPRSIVLNDLKSGALVQLETISQPIPMTVTAHITKLRESG
                     PAKQLRAIF"
BASE COUNT          432 a          443 c          485 g          456 t
ORIGIN      
        1 aatatgtatt gtcgtaaata catggatgct caccccgaat taatcagtca ttacaaaacc
       61 gataacgaac atttcatcac tgatgtggac accgaagagg acttggcggc ctttgagaaa
      121 aagtggggct ttgagctgac actcccgaac ttggcgcagt gtgcgacaga tggtgacggg
      181 cctacacccg aaggtactca cgagccggca tacattgcgc ttcgaaagcg ctttgcggtg
      241 ccgcaatgag cggtcttcac tggccagtgc cgctgcagat ccacgccttt gatcaagcaa
      301 gcgatatcaa tccaaccctg gcctgtgcgt tcatggccat gcgtgccacc gacaccacac
      361 aggcaggtga caaggccttc tacgccagcc atgatcagtt gctagcaagg gtgcagttac
      421 ctgagtttga tgcgctaatt aagttcattg tcgggtcctt gcaaaagacc atcagtcagg
      481 ccaatgcggg cgtgtggccg cccggcaaaa tgcaattgca gttacaactg gcgggttgct
      541 ggttccagat tcaaaacggt atgtcgtttc atgatgtaca cacgcacggc aactgctcat
      601 ggtccggtgt ttattatgtt cagtgcgatg accatgaaaa acgtcgggct catcccgctt
      661 taggtgagat gaacggcgtg acacgctttt acggcccgta taccaactgg ctatcgggtg
      721 cctacatgga tgtcggcaat gcgtatttgc aaaggaatac gctcgatatc gaaccagagc
      781 caggccgctt ggtgctattt ccttcatacg tgccgcataa ggccatgcct tacgaaggcg
      841 agacggatcg cgtgatcgtg tcatttaacg tgcaggtgca ttcgcccgcg ggcgatcaga
      901 tgttcgctta tgaggcaacg tgatagatcg tggtcgaagg gtggtgtatg tcgctattaa
      961 aaaatagctc ttaattgctt ggctggcccg gattctctga gcttggtgat gtgtgcggtt
     1021 accgtcatgg ggatcggttg actaatcgtt tcgagctgga ccaaagcgcc tgatttcaaa
     1081 tcattaagca caattgatcg cggcagccat gcggccccag tggcggcaag tgccatctct
     1141 cttaacccca cagcaaacgc actctcacaa gcgatcgtgg cattctgttc tctgagtact
     1201 cgcggaactt cttcagccca gacaatgcca ccaaaaaagc tgctgaccgg ataggtcagt
     1261 aatggcaggt gttgtctttg tccccggact ctcccgtgct ttacgacact ggggtgagca
     1321 accaaaatca tctcatcact gccgagcttt ttgctgatgg ataagtgcgg cggtatggcg
     1381 tttggattat cttcagtttc gtaggcaacc agcatgtcaa cctcaccttt taaaaagagt
     1441 gcggtacagg tatccatgtt ttcggatatc acgcgatagt ttagattctt aatgcttgcc
     1501 gctagcttat ctagaaagtg tggcagaaaa gaagaaacta aaaggctgtg ctgcgccgcc
     1561 aatgtcaagg taatgcgatc ctgtgtggat gactgtgttt cattacgaac ctgatagatt
     1621 tggttgacta agttgcgaat cgccgtctca tgttcgttgg cagttggtgt gaaacgaaag
     1681 ggttttttac tgcgatcgat cagttcaaca ccgagccaag tctctagcgc ctgtattcgt
     1741 cgggagaagg ccggctgcga tacgtttcgc aaagaagctg ccgttgtgaa attcgcgcaa
     1801 tcgacgagtg ccaggt
//
LOCUS       DATBNL010000802         4186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_139239, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000802 DATBNL010000000
VERSION     DATBNL010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4186
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139239"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="VIC30_13670"
     CDS             complement(<1..464)
                     /locus_tag="VIC30_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019143389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7805466.1"
                     /translation="MNTDQSDITTDLPDDYQPSYRRPVSSGVDTTHQVILYLEEITVE
                     FDGFRALNALTMEIGVGELRCIIGPNGAGKTTMMDVITGKTRPSSGSAFFGQNLDLSK
                     LTEAQIATAGIGRKFQRPTVFEQHTVFENLELAFKCHKSVWPTLMARLTGEQR"
     gene            complement(461..1564)
                     /gene="urtC"
                     /locus_tag="VIC30_13675"
     CDS             complement(461..1564)
                     /gene="urtC"
                     /locus_tag="VIC30_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006221283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEY7805467.1"
                     /translation="MAAPFKSRTPVLFKPGAWIAILLVVGVFAVLPLLNLWLPVDHAW
                     HVSQHTISLLGKFICFALAALALDLVWGYAGILSLGHGLFFALGGYAHGMYLMRAANP
                     EPGQLPEFMVFLSWTEIPWFWAFTEYPLYAWLLVLLVPGLLAFVFGYFAFKSRITGVY
                     FSIITQALTFAAMLLFFRNETGFGGNNGFTGFKWILGFDITSPETRAGLYWASLLALL
                     GALVLGRWITTSKLGRVLMAVRDAEGRLRFLGYEPAGFKLFVWTLSAMLCGIAGALYV
                     PQVGIINPSEMSPENSIEMVIWVATGGRGTLIGPIIGAGTVNGLKTWFTSTFPEYWLY
                     ALGLLFVLVTVLLPQGIVGLVRKLMRRAQGDRS"
     gene            complement(1585..3195)
                     /gene="urtB"
                     /locus_tag="VIC30_13680"
     CDS             complement(1585..3195)
                     /gene="urtB"
                     /locus_tag="VIC30_13680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HEY7805468.1"
                     /translation="MGSRVLRWLCACMWVWMASAHATTSLSPELAAQLTAGQTTKRLA
                     AIEALGQAGTPEAGKVLEALTQANVFVTPQGQVFLKVDPPIDVLTGESVTEIPAAAKR
                     VRLNNRLRRAIQTEVAYAQLFDDRAEQQRQAARQLQSRADPDRLPILQRALDASVDST
                     ARQEIALAMAIASIKSEDLGLKLDAIDQLGNSGRGQFSVALRELLAQSEGGVYTEPES
                     VRTAASDALDKIERQQTIQTWLGNVFFGLSMGSVLLLAALGLAIIFGLMGVINMAHGE
                     LLMIGAYSTYLVQSAVQAWWPAGIDFYVLLAIPVAFVITACVGMVLEKTVIRWLYGRP
                     LETLLATWGVSLILIQAVRSIFGAQNVEVANPSWMSGGWTVMGDLVVSYNRIYIFFFA
                     LLVVAVLWLVLNHTRIGLFVRAITQNRRMANCVGVPTERVDMLAFGLGAGIAGLGGVA
                     LSQLGNVGPDLGRTYIVDSFMVVVLGGVGQLAGTVIAALGLGAINKMIEPVSGAVIAK
                     IAILVFIILFIQKRPQGIFAPKGRSAEA"
     gene            complement(3254..>4186)
                     /locus_tag="VIC30_13685"
     CDS             complement(3254..>4186)
                     /locus_tag="VIC30_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006386133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7805469.1"
                     /translation="NWTSVSRKSVLPVVEELNGLLFYPVQYEGEESSENVFYTGAAPN
                     QQAIPAVDYLMNNIGVERWALAGTDYVYPRTTNKILRAFLNEKGITNDNIEEIYTPFG
                     HSDYQTIVANIKKFSQGGKTAVVSTINGDSNVPFYKELGNAGLKATDVPVVAFSVGEE
                     ELRGVDTDPLVGHLAAWNYFESLDNPANKEFVAKWKAYAKAQNLPNYETAVTNDPMEA
                     TYIGINMWKQAVEQAGTTNVDKVIEAMGGQTFNAPDGYTIKMDETNHHLHKPVYIGEI
                     QPNGQFDVVWQTDGPIRAQPWSPFIEGNESKQGM"
BASE COUNT         1045 a         1189 c         1046 g          906 t
ORIGIN      
        1 cgctgctcgc cagtcaggcg agccattaag gttggccaca cagacttgtg acacttaaac
       61 gccagttcta agttctcaaa caccgtgtgc tgctcaaaca ccgtgggccg ctgaaacttg
      121 cgaccgatgc cggccgtggc aatttgtgct tcggtcagtt tggacagatc caagttctgt
      181 ccaaagaatg cgctgcccga gctgggccgg gttttacctg taatcacatc catcatggtg
      241 gtcttgcctg caccattggg tccaatgatg caacgcaact cacccacgcc gatttccatg
      301 gtcagcgcat ttagtgcgcg aaaaccgtca aactcaaccg tgatctcttc tagatacaaa
      361 atgacttggt gtgtggtgtc tacccctgat gagaccggtc ggcgataaga gggctggtag
      421 tcatcgggca agtcggttgt gatgtccgat tgatctgtgt tcatgaccga tctccttgcg
      481 cgcgtctcat cagcttgcgc accaggccga caatgccttg gggcaagagc accgtgacca
      541 gcacaaatag cagacctagg gcatagagcc aatattccgg gaaggtgctg gtaaaccaag
      601 tcttcaaacc attgacggta ccagcaccga tgatcgggcc aatcaacgtg ccacgccccc
      661 cggtggccac ccatatcacc atctcgattg agttttctgg tgacatttca ctcgggttga
      721 taatgccgac ttgcggtaca tacagggcgc cagctatccc gcacaacatc gccgagaggg
      781 tccagacaaa gagcttgaaa ccggctggtt cgtaacccag gaaacgcagg cgtccctcgg
      841 catcacgcac ggccatcaac actcggccga gcttagatgt ggtgatccag cgtccgagca
      901 ccaaggcacc gagcaacgcc agtaaactcg cccaataaag acctgcgcgg gtctcgggtg
      961 atgtgatgtc gaaccccaga atccatttga atccggtgaa accgttatta ccaccaaagc
     1021 cagtttcgtt acgaaagaac agcaacatgg ctgcaaaggt cagcgcttgg gtgatgatag
     1081 aaaagtacac accagtgatg cgcgacttaa acgcaaagta accaaacaca aacgccaaca
     1141 atccaggcac aagcaacacc agcaaccagg catatagtgg gtattcagta aaagcccaga
     1201 accacgggat ttccgtccaa ctcaagaaga ccatgaattc aggtaactgt cctggctccg
     1261 ggttggccgc acgcatcaaa tacatgccat gcgcgtaacc acccaaagcg aagaacaatc
     1321 cgtgacccag cgacaggatg ccggcgtaac cccacaccag atcgagtgcc aaagcagcca
     1381 gcgcaaaaca gataaacttg cccagcaacg aaatggtgtg ttgactgaca tgccaagcgt
     1441 gatcgacggg caaccacaga ttgagcaacg gcaatacagc aaagacgcca accaccaaca
     1501 aaatggcgat ccaagcacca ggtttgaata ggacgggcgt acgcgattta aatggcgcag
     1561 ccatggcggg tgatgtcagg gtcgtcatgc ttcggcgctc ctgcccttgg gtgcaaaaat
     1621 accctgtggc cgtttctgaa tgaacaagat aatgaaaacc aatatcgcta ttttggcgat
     1681 gaccgcacct gatacgggtt cgatcatttt attgatggcg cccaaaccga gcgcggcgat
     1741 cacagtacca gccaactgac ccacaccgcc cagcaccacc accatgaagg agtcaacaat
     1801 gtaggttcga cccaggtcag ggcctacatt gccaagctgg gataaggcaa caccgcccag
     1861 accagcgatg ccggcaccta gaccaaaggc aagcatatcc acacgctcgg tgggcacacc
     1921 gacacaattg gccatgcgcc gattctgtgt gatggcgcgc acaaataaac cgatgcgagt
     1981 gtggtttaac accaaccaca agacagcaac caccaacagc gcaaaaaaga agatatagat
     2041 tcggttgtaa ctgaccacaa ggtcacccat gactgtccag ccaccactca tccaactcgg
     2101 gttagcgact tcgacgtttt gtgcaccaaa aatgctacga actgcctgaa tcaggatcaa
     2161 gctcacaccc caggtggcca acaacgtctc gagcggtcta ccgtatagcc aacggatcac
     2221 ggttttttct agcaccatgc cgacacatgc ggtgatcaca aaggccactg gaattgcgag
     2281 caacacataa aaatcaattc cagccggcca ccaggcttgc acggctgatt gcacgaggta
     2341 ggtcgagtac gcaccgatca tgagtaactc accatgggcc atgttgatta cacccatgag
     2401 accaaaaata atggccaatc caagggcagc gagcaacaga acactgccca tactcaaccc
     2461 aaaaaataca ttaccgagcc aagtctggat ggtctgttgg cgctcgatct tatctaacgc
     2521 atcactggct gcagttcgca ccgactctgg ttccgtatag acaccccctt cactttgcgc
     2581 gagcagctcc ctcaaagcca cactgaactg tccgcgcccg gaattgccga gctgatcaat
     2641 ggcatcaagc tttagtccca gatcctctga tttaatcgat gctattgcca tggccagtgc
     2701 aatttcctgg cgcgccgtcg agtcgactga tgcgtccaag gctctttgta agatgggtaa
     2761 gcgatcagga tcggctcttg actgcaactg tctggcagcc tgtcgttgtt gctcagctcg
     2821 atcatcaaac aactgagcgt aagccacctc ggtttgtatg gcacgtcgca gacggttgtt
     2881 cagtcgcacg cgtttggcag ccgccggtat ctcggtgacg gactcaccgg tcaagacatc
     2941 tatcggtggg tctaccttga gaaagacttg gccttggggc gtaacgaaca catttgcttg
     3001 cgttaacgct tctaacacct ttcccgcttc tggtgtaccg gcctgtccca acgcttcgat
     3061 agcggccagt cgcttggtag tctgaccggc cgttaactgt gcggcgagct cggggctcag
     3121 agaagtggtc gcatgggcag atgccatcca tacccacatg catgcgcata accaacgcaa
     3181 tacacgacta cccatgtgat ttccccttcg tcccaagctc atccattact gctcatccat
     3241 tactgctcgt cgtttacata ccctgcttgc tttcattgcc ctcgatgaaa gggctccaag
     3301 gctgggcacg gatgggaccg tcggtttgcc acacaacgtc aaactgacca ttgggctgga
     3361 tttcgcctat gtagacgggc ttatgcaggt gatggttggt ttcatccatc ttgatggtgt
     3421 aaccatcggg tgcattgaaa gtttggccac ccatggcctc aatcacttta tccacattgg
     3481 tggtgcctgc ctgttcaaca gcttgcttcc acatattgat cccaatatag gtagcttcca
     3541 ttgggtcatt ggtcacggcc gtctcatagt tgggcaggtt ttgtgccttg gcgtaagcct
     3601 tccacttcgc aacaaactct ttgttcgcag ggttatcgag ggactcaaag tagttccatg
     3661 ccgcaaggtg accaaccaaa ggatcggtat caacgccgcg caactcctct tcgccgaccg
     3721 agaaggccac cactggcacg tcggtggctt tcaggcctgc attgccaagc tctttgtaga
     3781 aaggcacgtt ggagtcaccg ttaatcgtag agacaaccgc tgtcttaccg ccttgtgaaa
     3841 acttcttgat gttggccaca atcgtctggt agtccgaatg accaaacggt gtgtaaattt
     3901 cttcgatatt gtcgttggtg atgcccttct cgtttaggaa tgcacgtagg attttgttcg
     3961 tggtgcgtgg atacacatag tccgtgcctg ccagtgccca gcgctctacg ccgatgttgt
     4021 tcatcaggta gtcaactgca ggaatcgcct gctggttggg cgccgcgccg gtgtagaaga
     4081 cgttctcgga agactcttca ccttcgtact gaaccgggta gaacagcagg ccgttgagtt
     4141 cctcaaccac tggcagtacc gatttgcggg agaccgaggt ccagtt
//
LOCUS       DATBNL010000803         4401 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_187830, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000803 DATBNL010000000
VERSION     DATBNL010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4401
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187830"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VIC30_13690"
     CDS             complement(<1..1009)
                     /locus_tag="VIC30_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEY7805470.1"
                     /translation="MNRYPLWKYLTVLVALVLGFLYTLPNFFGEAPAVQVSSAKATIK
                     IEPEMQRQVEGILSQAGITNTGSSFERNGPVGTVRVRFADTDTQLVARDVIERALNPD
                     PADPSYTVALNLLPASPKWLSDIGANPMYLGLDLRGGVHFLLQVDMRGALTARYESLA
                     TEIRTALREDRIPSISSDREDLSVVTVFPDDEARNQALTLLRNRYNDMEFTGGVSQGM
                     NSGKPQLTGQLEPGAIAAVQSSALKQNITTLHNRINELGVAEPVIQQQGADRIVVQLP
                     GVQDVAKAKDILGRTATLEIRMVDDSPTAMSALSAGRVPFGLERYEDTDGRPLLLRRQ
                     VI"
     gene            complement(1086..1427)
                     /gene="yajC"
                     /locus_tag="VIC30_13695"
     CDS             complement(1086..1427)
                     /gene="yajC"
                     /locus_tag="VIC30_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003809416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEY7805471.1"
                     /translation="MSLQDSAGLVLAQAGGDAGSLMGLLPIILMFVILWFLMIRPQMK
                     RQKEHKALVAGLGKGDEVVTAGGMVGKITKVTDSYIGVEVSELADKPVEVLIQRSAVQ
                     TVLPKGTMKQL"
     gene            complement(1465..2598)
                     /gene="tgt"
                     /locus_tag="VIC30_13700"
     CDS             complement(1465..2598)
                     /gene="tgt"
                     /locus_tag="VIC30_13700"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003803688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEY7805472.1"
                     /translation="MMEFELLATDGAARRGRMTLNHGEVNTPIFMPVGTYGSVKAMLP
                     HELKEIGAQIVLGNTFHLWLRPGTEILEQHGGLHGFMGWDKPILTDSGGFQVFSLQGM
                     RKITEEGVTFASPVDGARLFLTPEISMQIQRSLNSDIVMVFDECTPYKIGDQIATHAQ
                     AAQSMELSARWAKRSKAEFERLGNPNALFSIVQGGMYEDLREVSLAALTDIGFHGYAI
                     GGLSVGEPKAEMMRILEHTTPKLPKEAPRYLMGVGTPEDLVAGVLAGVDMFDCVMPTR
                     NARNGWLFTRHGDIKIRNAKYRNDDRPLDEHCECHTCQHFSRAYLHHLQRLNEITGSR
                     LNTLHNLHFYLKIMAEMRQAIENQSLQAWASEFLQQRASNSVQ"
     gene            complement(2585..3676)
                     /gene="queA"
                     /locus_tag="VIC30_13705"
     CDS             complement(2585..3676)
                     /gene="queA"
                     /locus_tag="VIC30_13705"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008163012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEY7805473.1"
                     /translation="MNDHANSPIGQTSQTPEAYTLADFDYDLPQELIAQHPADQRTNS
                     RLLHVTVDGTLVDRRFTDLLSLLRPHDILVFNDTLVIKARLLGSKDTGGKVEVLVERI
                     LDGHRVLAHVKASKTPKPGAQLLLADALEVTVLARAQDLFELEFKEDVLGALDQYGHV
                     PLPPYIEHPDSAEDEARYQTVYARHPGAVAAPTAGLHFDEAMLEALSDHGIGKAFVTL
                     HVGAGTFQPVRDNDLSLHIMHSEWYTVPAETVRAIEAAKAAGGRIIAVGTTSVRALES
                     ACVANAGQLRAHQDDTELFIKPGFDWRIVDAMITNFHLPQSTLLMLVASFIGMSTMKA
                     AYAHAVSERYRFFSYGDAMFLEKGAHDGI"
     gene            3853..>4401
                     /locus_tag="VIC30_13710"
     CDS             3853..>4401
                     /locus_tag="VIC30_13710"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEY7805474.1"
                     /translation="MLRHVMAIMVLVVSGVLAVSGGVAHAADKAMPAEVARAWAKTGL
                     PESSMSVVIEEVGGSRLAGVNAAEFKNPASVMKLLTTWAAVSELGPDFVWRTALLIDE
                     NAKISDAGVLSGPVYLRATGDPLILLEDLWRLLRELRFRGITQINDIVVDRSAFAEVA
                     INPGDFDGKPDRPYNASPDAFMI"
BASE COUNT          981 a         1187 c         1218 g         1015 t
ORIGIN      
        1 gaatcacttg gcggcgcaac agcaacggcc tgccatcggt gtcttcgtag cgctcaagac
       61 cgaatggcac tcgaccggct gacagggcac tcatggcggt gggcgaatca tcaaccatgc
      121 gaatttcaag ggtagcggtg cgcccaagaa tgtctttggc tttggccacg tcttgcacgc
      181 cgggcagttg caccacgatc cggtcagcgc cttgctgctg gatcacgggt tcggccacgc
      241 cgagctcatt gatccggttg tgtagcgtcg tgatgttttg tttgagtgcc gagctttgga
      301 ccgcggcaat ggcgcctggt tcaagctggc ctgtcaattg cggcttgccg ctattcatgc
      361 cttggctcac gccgcccgta aattccatat cgttgtagcg gttgcgcaaa agcgtcagcg
      421 cttgattgcg cgcctcatcg tcaggaaata ccgttaccac cgacaagtcc tcgcgatccg
      481 aagatatgct cgggatgcgg tcttcgcgta gggctgtacg aatttcagtc gctagtgact
      541 cgtaacgtgc tgttagtgcg ccgcgcatgt cgacttgcag taagaagtgc acgccacctc
      601 ttaagtccag acccaaatac atgggattgg cgccaatgtc gcttaaccac ttgggcgagg
      661 ccggcaacag gttaagtgcc acggtatagc tcggatccgc agggtctgga ttcaaggcgc
      721 gttcaataac gtcacgcgcc accagctggg tatctgtatc ggcaaagcga accctgaccg
      781 tcccgactgg gccgttgcgt tcaaagcttg agcctgtgtt ggtgataccg gcttgcgaca
      841 gaatgccctc gacctggcgt tgcatctcag gctcgatttt gatggtggct tttgcgctag
      901 agacctgaac agcaggtgcc tcaccaaaaa agtttggcag ggtgtacaag aaccctaaaa
      961 ccagggcgac caagacggtc aggtatttcc agagagggta acggttcatc aaaactcgct
     1021 ggcagcagat gtgctgcaaa aacgcaccgc cggcatcaag ccggcggtgc ggtcagacct
     1081 atcaattaga gttgcttcat ggtgccttta ggcagcaccg tctgcacggc agagcgttga
     1141 atcagtactt caacaggctt atccgccagt tcagatactt caacgccaat gtagctgtcg
     1201 gtcaccttag tgatcttgcc gaccatgcca cctgcggtca cgacttcgtc acccttgccc
     1261 aagccagcaa ccagtgcttt atgctctttt tgacgcttca tttgtgggcg aatcatcaaa
     1321 aaccacaaaa tgacgaacat caaaatgatg ggtaacaaac ccattagcga tcctgcatcg
     1381 ccaccagcct gtgccagcac caaaccggcc gaatcttgca aagacattaa agcctcctta
     1441 gtcatacctg ataaaagttg cacgctattg taccgagttg gatgcgcgct gctgaagaaa
     1501 ctcgctcgcc caagcctgaa gtgactgatt ttcgatggct tggcgcattt cagccatgat
     1561 ttttaggtag aaatgtaagt tgtgtagcgt gttcaaacgc gacccagtaa tttcattcaa
     1621 acgctgcaga tggtgcaggt aggcacgcga gaaatgctgg caagtgtggc actcacaatg
     1681 ttcgtcaagt ggccggtcgt cattgcgata tttggcgttg cgaatcttga tatcaccgtg
     1741 acgcgtaaac aaccatccat tgcgtgcatt gcgagtgggc atgacgcagt cgaacatgtc
     1801 cacaccagcg agtacgccag cgacaaggtc ttccggcgtg ccaacgccca tcaaataacg
     1861 cggtgcctct ttgggcaatt tcggtgtcgt gtgctcgaga atacgcatca tctcggcctt
     1921 gggttcgccc actgacagcc cgccgatggc gtagccgtga aagccaatgt cagttagtgc
     1981 cgctagcgac acctctcgca gatcctcgta cataccgcct tgcacgatac tgaagagcgc
     2041 gttggggtta cccaaacgct caaattcggc tttggaccgt ttggcccagc gcgctgacaa
     2101 ctccatggac tgcgcagctt gcgcatgcgt ggcaatttga tcaccgattt tgtacggcgt
     2161 acattcgtca aacaccatta cgatgtcact gtttaagctg cgctggatct gcatggaaat
     2221 ctctggcgtc aaaaacaagc gcgcaccgtc aacgggcgag gcaaatgtca cgccttcttc
     2281 tgtgatcttg cgcatgccct gcaagctaaa gacctgaaag ccacccgagt cggtcagaat
     2341 cggtttgtcc catcccataa agccatgtaa gccgccatgc tgctctaaga tctctgtgcc
     2401 gggtctgagc cataagtgaa acgtgttacc gagtacgatc tgcgcgccga tctctttgag
     2461 ttcatgcggc aacatggcct tgacgctgcc gtaggtgccc accggcatga aaatcggcgt
     2521 attgacctca ccgtggttca gtgtcattcg cccacgtcgg gctgccccgt cggtggccag
     2581 tagttcaaat tccatcatgc gctccttttt ccaggaacat ggcgtcaccg taactgaaga
     2641 agcgatagcg ctcgctaacc gcatgggcat aggcggcttt catggtggac atgccaataa
     2701 atgacgccac aagcatcaag agcgttgact gcggcagatg aaagttggtg atcatggcgt
     2761 cgactattcg ccaatcaaat cccggtttga taaagagctc ggtgtcgtct tggtgggccc
     2821 gcaactgacc ggcattggcc acacatgcgg attccagggc ccgtacgcta gttgtaccga
     2881 cagcgataat gcgcccacct gcggctttgg ccgcctcaat ggctcgcact gtttcagcag
     2941 gtaccgtgta ccactcgctg tgcatgatgt gaagcgacag atcgttgtca cgcacgggct
     3001 ggaaggtccc agcacccaca tgcagggtaa caaacgcctt gccaatgcca tggtcgctca
     3061 aggcttcaag cattgcttca tcaaaatgta gccccgccgt gggtgcggcc accgcaccag
     3121 ggtgacgcgc gtagaccgtc tgataacgcg cctcgtcttc tgcagagtcg ggatgttcga
     3181 tgtagggcgg caaaggcacg tgaccgtact gatccagtgc accaagtaca tcctctttga
     3241 actcgagctc aaagaggtcc tgcgcgcgtg ccaacacggt gacttccagc gcatcggcca
     3301 gcaacagctg ggcgccaggc ttaggcgttt tactggcttt gacgtgtgcc agcacccgat
     3361 ggccatcgag aattcgttca accaggactt caactttgcc gccggtgtcc ttagaaccta
     3421 gaaggcgtgc cttaataacc aaggtgtcgt taaacaccag gatgtcatgc ggtcttaaaa
     3481 gactgagcag gtcggtaaag cgccgatcaa caagtgtgcc atcgactgtt acgtgtaaca
     3541 gtcgactatt ggtgcgctgg tcggctgggt gctgagcaat cagttcttga ggtaagtcgt
     3601 aatcgaagtc ggccagggtg taagcctcgg gtgtctgact tgtttggcca atcggtgaat
     3661 ttgcgtgatc gttcaatgca cttcctgcca taatgatgac tattaaatgg tttgttcggt
     3721 atatcgaccg gcatgattgt atcggtcgta ggacaccatt gcgcaaaaac cgcgcaggct
     3781 caaggtaacc gcagttattg tagtaaccgc agtagctgca gcaagcgcgc agacagagac
     3841 gaggggattt agatgttgcg acatgtcatg gcaatcatgg tgctagtggt ttcaggggtc
     3901 ttagccgttt caggtggcgt ggctcacgcc gctgataagg caatgccagc cgaagtggcc
     3961 agagcttggg cgaaaaccgg tttacccgaa tcatcgatgt ccgtggtcat cgaagaagtc
     4021 ggcggtagtc gcttggctgg ggtgaacgcc gccgagttta aaaatcccgc gtcggtgatg
     4081 aagctgctga ccacgtgggc ggcagtcagt gagctcggtc cagactttgt atggcgcacc
     4141 gcattgttaa tcgacgagaa cgccaagatc agtgacgctg gtgttttgtc gggccccgtt
     4201 tacttgcgcg ccacaggtga ccccttgatc ttgttagagg atctttggcg cttgctgcgt
     4261 gaactgcgct tcagaggcat tacgcaaatt aacgatattg tggtggaccg atcggcgttt
     4321 gctgaggtgg cgattaaccc cggtgatttc gatggcaaac ccgatcgacc ttataacgcg
     4381 agtccggatg cattcatgat a
//
LOCUS       DATBNL010000804         1562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_19407, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000804 DATBNL010000000
VERSION     DATBNL010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19407"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VIC30_13715"
     CDS             <1..400
                     /locus_tag="VIC30_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HEY7805475.1"
                     /translation="NQSGLARQYFDLAALNAMHQKCLMQLRALGGNIDAFFVCPHGPD
                     DNCNCRKPSPGMFYDIGRRFDVSLKGVPAVGDSLRDLQASAAAGCTPWLVQTGNGSKT
                     RQSPELPANTQFAEDLADVANQLLGGKTDS"
     gene            397..1116
                     /locus_tag="VIC30_13720"
     CDS             397..1116
                     /locus_tag="VIC30_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010929181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY7805476.1"
                     /translation="MNHIRATFYYLFLIVTVIPYAFITLLAAPLPLHWRYRITIGWPR
                     LAVWGAKVFCGLRWKIEGAENLPDGPAIVLAKHQSAWETLFLPSHLPREVCFVYKREL
                     HRIPFFGWGLALLRMIPIDRARGKEAFEQVVQIGQKRLDAGRWPILFPEGTRIAPGKM
                     GNFKMGGALLASRTQTPILPIALNAGEFWPRNAFAKRPGEITVRIGPLIEPDGLSPEE
                     LNAKVYAWIDEQMKSMRVTRQ"
     gene            1113..>1562
                     /locus_tag="VIC30_13725"
     CDS             1113..>1562
                     /locus_tag="VIC30_13725"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjP-like metallopeptidase domain-containing
                     protein"
                     /protein_id="HEY7805477.1"
                     /translation="MISEWARKGYDGLMQLAFNLDPTPDRTPRSAPTVGRHQRELTHR
                     GTQVVFTLQRSRRRSIGLTVAEEGLKVTAPSWVSLQQIDEAVIEKFDWIVKKLHEQQA
                     RQQRQQLVQSNWRAGGALSYLGHRIELRCDTPSNPEARGQLWFDGDVR"
BASE COUNT          345 a          450 c          427 g          340 t
ORIGIN      
        1 gaaccagtct ggcttggcac gtcaatactt tgatttggcg gcactcaatg ccatgcacca
       61 gaagtgttta atgcaactac gtgcgcttgg cggcaacatc gacgcatttt ttgtgtgtcc
      121 acacggtcca gatgacaact gcaattgccg caaaccatca cccggtatgt tctacgacat
      181 tgggcgacgc tttgatgtca gtttaaaagg cgtaccagcg gtgggcgact cgctgcgcga
      241 tctgcaagcc agtgcagccg ctggctgcac gccctggctc gttcaaaccg gcaacggttc
      301 taaaacccgc caatcgccag aactacccgc caacacgcaa ttcgccgaag atttggccga
      361 cgtggcgaat caactcctag gcggcaagac cgactcatga atcacatccg cgccacgttc
      421 tactacctgt ttctgattgt gacggtcatt ccctacgctt ttatcacctt gctcgccgca
      481 cctttgccac tgcattggcg ctatcgcatc accataggct ggccacgctt ggcagtctgg
      541 ggcgccaaag tcttttgtgg cttgcgctgg aagattgaag gtgccgagaa cctgcccgat
      601 ggtcctgcga ttgtgctggc caagcaccaa tcggcttggg aaaccctctt tttaccgagc
      661 cacttgccac gcgaagtgtg ctttgtctac aagcgcgaat tgcaccgcat cccgtttttt
      721 gggtggggct tggcactatt gagaatgatc cccatcgatc gggcacgcgg taaagaggcc
      781 tttgagcagg tagtgcaaat cggacaaaaa cgcctcgatg ccggacgttg gccgattttg
      841 tttcctgaag gcacgcgcat cgcacccggc aagatgggta attttaagat gggcggtgcg
      901 ttactggcct cacgcactca gacacccatc ctaccgatcg cactgaacgc tggcgaattc
      961 tggccacgca acgctttcgc caaacgccct ggcgagatta ctgtgcgcat cgggccgctg
     1021 atcgagcccg atggcctgag cccagaagaa ctcaatgcca aggtgtatgc ttggattgac
     1081 gaacagatga aatccatgcg ggtgacacgg caatgatttc tgagtgggcg cgcaaaggct
     1141 acgatgggct aatgcaactg gctttcaacc ttgaccctac acccgaccgt acgccgcgct
     1201 cagcgccaac ggttggcagg catcaacgtg agttgaccca ccgcggcaca caggtggttt
     1261 ttacgctaca gcgatcgcgt cgccgatcca ttggcttgac ggtcgccgaa gaaggactga
     1321 aagtcacggc cccgagttgg gtctcgctgc agcaaattga cgaggccgtc attgaaaagt
     1381 ttgactggat cgtcaagaag cttcatgaac aacaagcccg tcagcaacga caacagttgg
     1441 tgcagtcaaa ctggcgcgct ggtggcgcat tgtcctatct gggtcatcgc atcgagctgc
     1501 gctgcgatac accgtcaaac ccggaggcac gaggtcaact ctggttcgat ggtgatgtgc
     1561 gc
//
LOCUS       DATBNL010000805         4001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_99297, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000805 DATBNL010000000
VERSION     DATBNL010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99297"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(363..893)
                     /gene="msrA"
                     /locus_tag="VIC30_13730"
     CDS             complement(363..893)
                     /gene="msrA"
                     /locus_tag="VIC30_13730"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005018764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEY7805478.1"
                     /translation="MTIAVFGGGCFWCTEAFFAEINGVQAIEPGYCGGHVDNPTYEQI
                     CQKNTGHIEAVRLSFDPDVVSYQDLLAVFFATHDPTTPERQGADVGPQYQSAIFYQDE
                     SQLLLAQQMIDALDASGQFPAPICTKLLPRSTFWTAEKYHHEFFMRNPNQGYCQFVIA
                     PKMEKLRQQFAHQIKS"
     gene            complement(962..1312)
                     /locus_tag="VIC30_13735"
     CDS             complement(962..1312)
                     /locus_tag="VIC30_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013744744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY7805479.1"
                     /translation="MPLRTNLLLGLLCVSPIGVGAQDTLTMEQGMSLMQQNMCLGCHQ
                     VDKRRVGPSFANIANRYGGGERDATITVLMNSIQNGGRGKWGAIPMPAQPQVSDEEAR
                     DMAIFILSLVQKPE"
     gene            complement(1296..2981)
                     /gene="ilvD"
                     /locus_tag="VIC30_13740"
     CDS             complement(1296..2981)
                     /gene="ilvD"
                     /locus_tag="VIC30_13740"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY7805480.1"
                     /translation="MSKYERSSHITEGVARAPNRSMYYGMGYKESDFENPMIGVANGH
                     STITPCNSGLQPLADAAVDAVRAAKGNPQVFGVPTISDGMSMGTEGMKFSLASREVIA
                     DCVETAVQGQWMDGVVVIGGCDKNMPGGMIGIARCNVPAIYVYGGTIKPGHHKGKDLN
                     IVSVFEAVGEYTMKRMSAEDFKAIEQKAIPGSGSCGGMYTANTMSSSFEAMGMSLPYS
                     STAANEDNEAIENAAKAATVLVEAVRANRKPRDIITRESIENAVSVIMAIGGSTNAVL
                     HYLAIAHAAEVPWTIDDFERIRKKVPVICDLKPSGKYLTVDLHKAGGIPQVMKLLLNA
                     GLLHGECLTITGQTIAEVLKDVPDTPPADQDVIRPLDRALYNQGHLAILKGNLATEGA
                     VAKITGLKNPVITGPARVYDSEDLAMAAIMDQQIKPGDVVVIRYEGPKGGPGMREMLA
                     PTSALVGQGLGESVGLITDGRFSGGTWGMVVGHVAPEAFVGGTIGLIEEGDSITIDAH
                     QLLLQLNVPDEEIERRRQGWKQPAPRYTRGVLGKIAKLASSASKGAVTDAFED"
     gene            3086..3880
                     /gene="lgt"
                     /locus_tag="VIC30_13745"
     CDS             3086..3880
                     /gene="lgt"
                     /locus_tag="VIC30_13745"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019560387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEY7805481.1"
                     /translation="MLSYPQIDPVAFELGPLAVHWYGLMYLIGFGSAWLLGRWRVKHG
                     LTRVTLTDFEDMLFLAMLGAVIGGRLGYTLFYQPGYYLQHPLEIAFLWQGGMSFHGGL
                     LGVVASLWFFARRKQYRFLELGDLVAPLVPLGLAAGRLGNFINGELWGRPTELPWGMV
                     FPGAQDGIARHPSQLYQFALEGMLLFIVVWWFARNPKPVGQVSAVFLMGYGVLRFVAE
                     FGREPDAFLGLLWANLSMGQWLCIPMVIAGAWLYHYCSKARQDLHR"
BASE COUNT          911 a         1140 c          981 g          969 t
ORIGIN      
        1 aagttgcccc agcatccaat acccacctaa gcacaccaac tgcctctcga cattaagtgc
       61 ccacacttat cggttgtttc gttgttaaag aacaatgcag tcgttggact gcctacaatc
      121 attcgcttga gccaaagaca aaaaagcgac agacttttaa aaaacttctt gtctgcaaca
      181 aatctgtagt gattttcgat taacttgatc ggaaccgatc aaagaaacct gctcatgcta
      241 ctgactgcgt tttctgctct tcgacatttc gttttgatct gtcgttgaat cagagaaacg
      301 agattatgca cgtgtttttt tggcctgtca aacgcatacg caaaaataat gacaaaattt
      361 gttcatgact taatctgatg ggcaaactgc tgacgtagct tctccatctt tggcgcaatc
      421 acaaactgac aatagccctg attcgggttg cgcataaaaa actcgtggtg atatttttct
      481 gccgtccaga aagtgctccg gggcagcagt ttggtgcaga tcggcgctgg aaattgacca
      541 ctggcatcca acgcatcaat catctgttgg gccaacaaaa gctgagactc gtcttggtaa
      601 aagatcgcag actggtactg gggcccaacg tcagcgcctt gacgctcggg cgtggtgggg
      661 tcatgcgtgg caaagaaaac tgccaacaaa tcctggtaac tcaccacatc cggatcaaaa
      721 ctaagacgca ccgcctcaat atggccggtg ttcttctgac agatctgctc ataggtaggg
      781 ttatcgacat gacctccgca gtagcccggt tcgatcgctt gcacgccgtt aatctcagca
      841 aagaaagcct ccgtgcacca gaaacaacca ccaccaaaca ccgctattgt catcacacac
      901 cccaaaaaac tcaaattatt cgctacaagc ccgttactaa ttaatagcta ctaccaacca
      961 atcactcggg cttttgcaca aggctcagaa taaaaattgc catgtcgcgg gcttcttcat
     1021 ctgagacctg cggttgggcc ggcatcggta tggcgcccca cttgccacgc ccaccgttct
     1081 gtatcgaatt catcagcacc gtgatcgtgg catcgcgctc accgccgcca tagcgatttg
     1141 caatattggc aaaggacggg cccacacgcc tcttgtctac ctgatgacac ccgagacaca
     1201 tgttttgctg catgagactc atgccttgct ccatggtcag ggtgtcttgt gcaccaacac
     1261 ctatggggct cacgcacagc aagcctagca acagattagt cctcaaaggc atcggtcacc
     1321 gctcctttac tcgcgctgct ggcaagcttg gcaattttgc ccaacacgcc tcgggtataa
     1381 cgcggcgcgg gctgcttcca accttggcga cgtcgctcaa tttcctcatc aggcacattt
     1441 aactgcaaca gcaactggtg cgcgtcgatc gtgatggagt cgccctcttc aattaaacca
     1501 atagtcccgc ccacgaaggc ctcaggggcg acgtgcccaa ccaccatgcc ccaggtgcca
     1561 cccgagaaac gcccgtcggt aattaatccg acgctctcgc caaggccctg gccaaccaag
     1621 gctgaagtgg gtgccaacat ctcgcgcatg cccggaccgc ccttggggcc ttcatagcga
     1681 atcaccacca catcgcctgg cttgatttgt tggtccatga tggctgccat ggccaaatcc
     1741 tcagagtcat acacccgcgc aggtccggta ataaccgggt tcttcagccc ggtgattttg
     1801 gcaaccgccc cctctgtggc caggttgcct ttcaagattg ccaggtggcc ctggttatac
     1861 aaagcacgat caagcggacg aatcacgtct tggtccgccg gcggcgtatc gggtacatcc
     1921 ttgagcacct cggcaatggt ctggcctgta atggtcaaac actcgccgtg cagtaagcct
     1981 gcatttaaca gcaacttcat tacctgcggg ataccaccag ctttgtgcaa atccacggtc
     2041 aaatacttgc cagacggttt taggtcgcag ataaccggca cctttttacg gatgcgctca
     2101 aaatcatcga tcgtccaagg cacctcagca gcgtgggcaa tcgcaaggta gtgcaacacc
     2161 gcattggttg atccaccaat ggccatgatg acggacaccg cattctcaat ggattctctg
     2221 gtgatgatgt cacgcggctt tcggttagcg cgcacggcct cgaccagcac cgttgcagct
     2281 tttgccgcat tttcaatcgc ttcgttatct tcgttggcag cagtcgatga gtagggcaag
     2341 ctcataccca tggcttcaaa tgaagagctc atggtgtttg cggtatacat gccgccacag
     2401 gagccagagc ctgggattgc cttttgctca atggccttaa agtcttcggc gctcatacgc
     2461 ttcatggtgt attcaccaac agcttcgaac accgacacga tgtttaagtc cttgcctttg
     2521 tggtggcctg gcttgatcgt gccaccgtaa acataaattg cgggcacgtt gcagcgagca
     2581 atgccaatca tgccgcccgg catgttcttg tcacaaccgc caataaccac cacaccatcc
     2641 atccactgac cttgcacggc ggtctcgacg caatcagcaa tcacctcacg cgatgccaat
     2701 gagaacttca taccttcggt acccatcgac ataccatcgg aaatcgtcgg caccccaaac
     2761 acttgcgggt tgcctttggc tgcacgaacc gcgtcaacgg cggcatcggc caaaggctga
     2821 agaccactgt tgcaaggcgt gatggtcgaa tgaccattgg caaccccgat catgggattc
     2881 tcaaagtcgc tttccttgta gcccatgccg tagtacatgg aacggttggg cgcgcgggcg
     2941 acgccttcgg tgatgtgact ggaacgttcg tatttagaca tgagcttctc tttcgctttg
     3001 agttatcaga cgatgcactg attgattcag acagttattc tgcaggcagt tattatgaaa
     3061 caactttaca caaaacgttg catccatgct gtcttaccct caaattgacc ccgttgcctt
     3121 tgaacttgga cctctggctg ttcactggta tggcctgatg tacctcatcg gatttggtag
     3181 cgcatggctt ttgggccgtt ggcgtgtcaa gcatggctta acacgcgtaa cactcacaga
     3241 ctttgaagac atgttgtttc tggcgatgct cggtgcggtc atcggtggac gtctggggta
     3301 caccctgttt tatcagcctg gttattactt gcaacacccc ttggaaatcg cattcctgtg
     3361 gcaaggcggc atgtcgtttc atggtgggtt gcttggcgtt gtcgcgagcc tgtggttctt
     3421 cgcgaggcgt aaacaatatc gctttctgga gctcggtgac ctagtagccc cgctggttcc
     3481 tttgggctta gccgccggtc gcttgggcaa ctttatcaac ggtgaactat ggggacgccc
     3541 aactgagctg ccatggggca tggtgtttcc tggcgcgcaa gacggcatcg cgcgccaccc
     3601 atcacagctt tatcagtttg ccctggaagg catgctgcta tttatcgtgg tttggtggtt
     3661 cgcccgcaac cccaagccag ttgggcaagt cagtgccgtg tttctgatgg gatacggggt
     3721 tttgcgtttt gtcgccgaat ttggtcggga gcccgatgca tttttgggcc tgctatgggc
     3781 caacctgagc atgggtcaat ggttgtgcat tccgatggtg atagccggcg cctggctcta
     3841 ccactactgc agcaaagcca ggcaggactt acaccgataa atgccccgcg catgccgtca
     3901 agaccggcat ctcgaaccct aggttcaagg tcggccgcct cgtgaagcgc ttcgagcaca
     3961 tctaacaaga gacacgcatt cccactcttc taaccagcga c
//
LOCUS       DATBNL010000806         4000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_198552, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000806 DATBNL010000000
VERSION     DATBNL010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198552"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1022
                     /locus_tag="VIC30_13750"
     CDS             <1..1022
                     /locus_tag="VIC30_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7805482.1"
                     /translation="SQRRDQLGKVNIKVDHTNRSGKVVAELEHIDHAFNGTTVIKDFS
                     ATILRGDRLGLIGPNGAGKTTLLKIILGELAPSAGKVTLGTNLQIAYLDQMRDQLDES
                     AALVDVINPGSQWVEIGQERKHVMSYLGDFLFEPARAQSPVSSLSGGERARLLLARLF
                     ARPANVIVLDEPTNDLDIETLELLESLLQEFSGTVLLVSHDREFLDNVVTQTIAYEGN
                     AHWGCYVGGYGDWLSQRPVPTQNTTTNKPSKSSAPQKPTNKPKRPQRLSSWEQRELDE
                     LPAMIESLETQQANLTDELSSPDLYTNGPDKAADIQAEIDRVQAELAKHYDRWEQLEA
                     RQSSD"
     gene            complement(1007..2074)
                     /gene="pyrC"
                     /locus_tag="VIC30_13755"
     CDS             complement(1007..2074)
                     /gene="pyrC"
                     /locus_tag="VIC30_13755"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEY7805483.1"
                     /translation="MSSNPQTLTITQPDDWHLHLRDGDALQAVVADSARQFKRAIIMP
                     NLKPPVTTLEQALAYRGRIMSALQSQGLGDLAFDPLMTLYLTDNTRVEDIEAIAASPD
                     MYAVKLYPAGATTNSDQGVTDLLGRCSKVLEAMQRLSVPLLVHGEVTDPAIDVFDREA
                     VFIERVMIGLRKAFPELKVVFEHLTTKDAVDYVRQAEGPIGATITPQHLLYNRNAIFT
                     GGLRPHWYCLPVLKRETHRLALVEAATSDNPRFFLGTDSAPHARTLKEHASSCAGCYS
                     ALHAMTLYATVFDSVGRLDRLEAFASHRGADFYGLPRNSAKLTLVKRPYEVPESLPFG
                     KASLVPLASGETFGWQVQSLD"
     gene            complement(2098..3285)
                     /locus_tag="VIC30_13760"
     CDS             complement(2098..3285)
                     /locus_tag="VIC30_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013517703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEY7805484.1"
                     /translation="MYGHVPAEIFDGFQDELRAFRRDLHAHPELGFQESRTSARVAGM
                     LEAMGIEVHRNIGKTGLVGVLKGQRDDAARLIGLRADMDALPLKESNQFGHASVKPGL
                     MHACGHDGHTTILLGAAKYLAQTKRFNGRVAFIFQPAEEGLGGAQAMIDDGLFERFDC
                     EAVYALHNWPGLPPGMIGINSGPMMAAADRFEVVIEGRGGHGAHPYQTIDPVVVASHI
                     VTALQSIVARNVSPQDAAVITVASIQAGDPLAMSVIPDHATLVGTVRTFRHSVQEMIQ
                     RRMQALVQQIASGFDASATLRYQKIYPPTINTPEQAALVADIATELFGPERVERNLPP
                     SMGAEDFSYMLQHRPGAYFRLGQGGAQSGCFLHNPNYDFNDDVIPVGARLFASIVERS
                     MPL"
     gene            3433..3705
                     /locus_tag="VIC30_13765"
     CDS             3433..3705
                     /locus_tag="VIC30_13765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HEY7805485.1"
                     /translation="MATAKKTERKPNAAFMKPMTPSPTLAAVIGAEAVPRTEVTKKIW
                     EYIKKNNLQDPANKRNINADDKLRPIFGKDQVSMFEMTKLISGHLS"
     gene            complement(3765..>4000)
                     /locus_tag="VIC30_13770"
     CDS             complement(3765..>4000)
                     /locus_tag="VIC30_13770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003814593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805486.1"
                     /translation="AIIIIYIKRGDAAGTVYATHFDWLIATFLWSLLWLALSFLTTFI
                     GIGWIGLIATVVWVLYRLIKGFLALLDGHAIVA"
BASE COUNT         1025 a         1136 c         1002 g          837 t
ORIGIN      
        1 gctcacaaag gcgagatcaa cttggcaaag tcaacatcaa agttgaccat accaaccgtt
       61 cgggcaaagt ggtcgccgaa ctcgagcaca tcgatcatgc ctttaacggc accaccgtca
      121 tcaaagactt ctcagccacc atcttgcgtg gcgaccgact cggcttgatt ggccccaatg
      181 gcgcaggcaa aacgacccta cttaaaatca tcttgggtga acttgcaccc tcggctggca
      241 aggtcacgct tggcaccaac ttgcaaatcg cctacctcga ccaaatgcgc gaccaactcg
      301 acgagtcagc cgcattggtt gatgtcatca acccaggcag ccagtgggtt gaaatcggtc
      361 aagagcgcaa acatgtcatg agttaccttg gcgactttct gtttgagccg gcacgcgcgc
      421 aatcaccggt cagcagcttg tctggcggtg aacgcgccag gctattgctc gcgcgcctgt
      481 tcgccagacc tgctaacgtc atcgtgctcg atgaacccac caatgatctg gacatcgaaa
      541 cccttgaatt gcttgaatcc cttctacagg aattttctgg gactgtgttg ctcgttagtc
      601 acgaccggga gtttctcgac aatgtcgtga cccagaccat tgcttacgaa ggcaatgcac
      661 attgggggtg ttatgtcggt ggctatggcg attggctttc tcagcgacct gtgccgaccc
      721 aaaacaccac gaccaacaaa cccagcaaat cgtccgcccc tcaaaaacct accaacaagc
      781 ccaagcggcc acaaagactt agcagttggg agcaacgcga actcgatgaa ctgcccgcta
      841 tgattgagtc ccttgaaaca caacaggcca atctgacaga tgaactcagc tcgcctgatc
      901 tctataccaa cggtccagac aaagctgccg acattcaggc tgagatcgat cgggtacagg
      961 ccgaacttgc taagcattat gaccgatggg aacagctcga ggcgcgtcag tcgagtgact
     1021 gaacctgcca gccaaacgtc tcaccactcg ctaacggcac caggctggcc ttaccgaatg
     1081 gcagactttc agggacttca taaggtcgct taaccagcgt cagcttggca ctattgcgcg
     1141 gcaacccgta gaagtctgcg ccgcgatggc tggcaaacgc ttcgagtcgg tctaaccgac
     1201 caacagagtc aaacaccgtt gcatacagcg tcatggcatg caaggccgag taacaacccg
     1261 cgcagctact ggcatgctct ttcagggttc ttgcgtgcgg ggcactgtca gtccctaaaa
     1321 agaaacgcgg gttatcgctt gtggcagcct cgactagcgc caaacgatgg gtctcacgtt
     1381 tgagtaccgg caagcagtac caatgcggac gcagcccacc cgtaaaaatc gcattgcggt
     1441 tgtacaacaa atgctgcggc gtgatcgtgg ctccaatggg accctcggct tgacggacat
     1501 agtcaaccgc atctttggtt gtcaggtgct cgaacaccac cttgagttca gggaaagcct
     1561 ttctaagccc aatcatgacg cgctcgataa acacggcctc tcgatcgaac acatcgatag
     1621 ccgggtcagt aacctcacca tgcaccaaca atggcactga caagcgctgc atggcctcta
     1681 gaaccttact gcagcgaccc agaagatcag tgactccctg atctgagttg gtcgtggcac
     1741 ccgccgggta gagttttact gcatacatgt cgggcgaggc ggcaatggcc tcgatatcct
     1801 caacgcgcgt gttgtcggtc agatataggg tcatcaacgg atcgaacgct aaatcgccca
     1861 aaccctgaga ttgcaaggca ctcatgatgc ggcctcggta agccaacgct tgttcaagcg
     1921 tggtgacggg cggcttgaga ttgggcatga tgattgcgcg cttgaactgc ctagcggagt
     1981 cagcaaccac ggcttgcagc gcatcaccgt cccgaaggtg caaatgccag tcatcaggct
     2041 gagtaatggt taatgtttgt gggtttgagc tcattgaagt ggtcgtccag acaaggttca
     2101 aagtggcatg gatctttcaa cgatactcgc aaacaagcga gcccccactg ggatcacatc
     2161 gtcgttgaaa tcataattgg ggttgtgcaa gaaacaaccg ctctgtgcgc caccttgtcc
     2221 caatcggaag taggcacccg ggcggtgctg caacatgtac gagaagtctt cagcacccat
     2281 cgatggcggc aaattgcgct ccacacgctc cgggccaaac agttcggtcg caatatctgc
     2341 aacgagtgct gcctgttcag gcgtgttgat ggttggtgga tagatttttt gataacgcag
     2401 ggtcgctgac gcatcaaaac cgctagcgat ctgctgcacc agggcttgca tgcgacgttg
     2461 aatcatttct tgaacagaat gccgaaatgt acgcaccgtg ccaacaaggg tggcatggtc
     2521 ggggatcaca ctcatggcca gggggtcacc ggcctgtatg ctcgccacgg taataaccgc
     2581 cgcatcctga ggactgacat tacgcgcgac aatgctttgc aaagccgtca caatgtgcga
     2641 tgccaccacc accggatcaa tggtctggta agggtgcgcg ccgtggccac cgcggccttc
     2701 aatcaccacc tcaaaccgat cggcagcagc catcatgggt cctgagttaa tgccaatcat
     2761 gccgggtggc aggcctggcc aattatgcaa cgcatagact gcctcacaat caaagcgctc
     2821 gaacaaacca tcatcaatca tggcctgtgc accaccgagt ccttcttctg ccggctgaaa
     2881 aataaacgcg acccttccat taaaccgctt tgtctgcgca agatatttgg ccgcgcccaa
     2941 caaaattgtc gtgtgcccgt catgcccaca agcatgcatc agtcccggtt taaccgatgc
     3001 atggccaaac tgatttgact ctttgagtgg taacgcgtcc atgtcagcgc gcagcccgat
     3061 taaccttgcg gcatcatcgc gctggccctt aagcacgccg accaagccgg ttttgccgat
     3121 gttgcgatgc acctcaatac ccatggcttc aagcatgccc gcaacccgtg cactggttct
     3181 cgactcctgg aaacccagct ccggatgggc atgcagatca cgccgaaagg cacggagctc
     3241 atcctgaaat ccatcgaata tttcggcggg gacatgaccg tacacggggc ttttcctagg
     3301 gtaaacgtga tatttgtagc agtttacagc gcatgcttct ttgatacagt gttaaggttg
     3361 ttggctaagc cagattgcta agccaatcta tttttataac gactattatt gctggcaata
     3421 aggagagtcc gaatggccac cgccaaaaaa accgagcgta aacccaacgc agcattcatg
     3481 aaacccatga cacctagccc aaccctggcg gctgtgattg gtgctgaagc ggtgccacgc
     3541 accgaagtga caaaaaagat ttgggaatac atcaaaaaga acaacctgca agacccagcc
     3601 aacaagcgca atatcaatgc agacgacaag ctgcgcccga tatttggcaa ggatcaggtt
     3661 tccatgtttg agatgaccaa acttatcagc ggtcatttgt cctgatcgca ccataaaaaa
     3721 agcgcccgac agggcgcttt ttttattggt tcatagacta accactaggc aacgatggca
     3781 tgcccgtcaa ggagcgctaa aaagcctttg atcaggcgat acaacaccca gacaactgtt
     3841 gcaatcaacc cgatccagcc gattccaata aaggtcgtca gaaaacttaa ggccagccac
     3901 aacaacgacc acaagaaagt tgctatcaac caatcaaaat gcgtggcgta aacagtacct
     3961 gccgcgtcgc ctcgtttgat gtagataatg ataatggccg
//
LOCUS       DATBNL010000807         2084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_29548, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000807 DATBNL010000000
VERSION     DATBNL010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29548"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VIC30_13775"
     CDS             complement(<1..317)
                     /locus_tag="VIC30_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014972303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY7805487.1"
                     /translation="MSQAPVGEVTGVVTEATMVRFDRVSKRYGDLVVLDELCLSVKPN
                     EKVAIIGPSGSGKTTVLRLLMTLEQINEGVIYVDGVPLTHESRGGELVRASSAHLRQM
                     RGS"
     gene            complement(314..991)
                     /gene="ehuD"
                     /locus_tag="VIC30_13780"
     CDS             complement(314..991)
                     /gene="ehuD"
                     /locus_tag="VIC30_13780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020704575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0033286 - ATPase-coupled ectoine
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0033288 - ATPase-coupled hydroxyectoine
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0033308 - hydroxyectoine transport
                     [Evidence IEA];
                     GO_process: GO:0051470 - ectoine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine/hydroxyectoine ABC transporter permease
                     subunit EhuD"
                     /protein_id="HEY7805488.1"
                     /translation="MNQVWDWGYAWEVLPILAQAAVITLQVTIIGFFLALLVGLIFAA
                     GRLMGPRWVQLGFSAIVEFIRSTPLLIQIFFLYYVLPDYGIAMDAYLTGVIALGLHYG
                     AYCAEVYRSGLENVPKGQWEAAHALNLGSWTTFKDIILPQAIPPIVPALGNYLVALFK
                     ETPLLSAIAVLELMQTAKILGSESFQYTEPITIVGLFFLLFSLVCAYLIRRVEARLRS
                     RQGVHKA"
     gene            complement(988..1713)
                     /gene="ehuC"
                     /locus_tag="VIC30_13785"
     CDS             complement(988..1713)
                     /gene="ehuC"
                     /locus_tag="VIC30_13785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013590824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0033286 - ATPase-coupled ectoine
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0033288 - ATPase-coupled hydroxyectoine
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0033308 - hydroxyectoine transport
                     [Evidence IEA];
                     GO_process: GO:0051470 - ectoine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine/hydroxyectoine ABC transporter permease
                     subunit EhuC"
                     /protein_id="HEY7805489.1"
                     /translation="MAVIVVASVLSFTLGLVAATFSGFREFVPELLRGLLVTLQVTAG
                     GALVAVVAALLAALGKMYGVRPVRWLAVTYIETFRGTSALVQLFWLFYVLPHFGVTLD
                     AITVGIVALGLNVGAYGAEVVRGAIGGVARGQWEAALALNMSHWHTLRYVVLPQAFVA
                     MIPPWGNLFIELLKATALVSLITLSDLAFKAQQLNQNTLRTVEIFTLVLLVYLAISLL
                     ITIAMRALERRASKGLRRGRVTQ"
     gene            complement(1747..>2084)
                     /locus_tag="VIC30_13790"
     CDS             complement(1747..>2084)
                     /locus_tag="VIC30_13790"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY7805490.1"
                     /translation="LVVPDFAAAVAAVKSSRASAAAFTSLTAADLASKDDSIERAEPF
                     TFEHDGTIYKGEGSFGFRTEDTALRDAVNEQLAQFIGTPEHLEMVEVFGFDASNLPEK
                     TAAQHCAGE"
BASE COUNT          581 a          600 c          479 g          424 t
ORIGIN      
        1 atggatccgc gcatttgacg caaatgcgca ctactagcgc gcacaagctc gccaccgcgt
       61 gactcgtgtg tcagcggcac cccatcgaca taaatcaccc cttcgtttat ctgctcgagc
      121 gtcatcagaa gacgtagtac cgtggtttta cctgaacccg atggtccaat aatggcaacc
      181 ttttcgtttg gtttgaccga tagacacaac tcgtcaagca caaccaaatc gccataacgt
      241 ttgctaactc gatcaaagcg caccatggtc gcttcagtga ccacgccagt gacttctcct
      301 acaggtgctt gactcatgct ttgtgaactc cttggcggct tcgtaaacgt gcctcaaccc
      361 tcctaatcag atatgcacag accaggctga acaacaggaa gaacagtcca actatcgtga
      421 taggttcggt gtattggaaa ctctcggaac ccagaatctt ggctgtttgc atcaactcca
      481 acacggcaat ggctgacaac agcggtgttt ccttaaatag cgccactaga taattgccga
      541 gtgcaggaac aattggcggt atggcctgcg gcaaaataat gtccttaaac gtcgtccaag
      601 atccaaggtt cagagcgtgc gctgcttccc actggccctt aggcacgttc tccagaccag
      661 atcggtagac ttcggcgcaa taagcaccat aatgcagtcc aagcgcgatc acccccgtca
      721 agtaggcatc catggctatt ccatagtctg gcaaaacgta gtacaggaaa aaaatctgga
      781 tcaacagcgg tgttgatcga atgaactcga cgatggcgct aaagccgagc tgcacccaac
      841 ggggacccat aagcctgccg gcagcaaaaa tcaaaccaac cagcaaagcc aagaaaaaac
      901 cgatgatcgt gacctgcaat gtgatcacgg cggcttgagc caggataggt aaaacctccc
      961 aggcgtaacc ccaatcccag acttggttca ttgggtcacc ctcccgcggc gcagaccttt
     1021 tgaggcgcgc cgctcaagcg ctcgcatggc aatcgtgatc aaaagggaaa tcgcgaggta
     1081 aaccaataac accaaggtga atatttcaac cgtgcgcaag gtgttttgat tgagttgctg
     1141 agctttaaag gccagatcgg aaagtgtaat tagcgatacc aaagcggttg ccttgagtaa
     1201 ctcaataaac aaattgcccc aaggcggtat catcgccaca aatgcttgcg gcagcacaac
     1261 gtagcgcaag gtatgccagt gggacatatt caatgccagt gctgcttccc actgccctct
     1321 agccacacca ccaatcgccc cacgcacgac ctcagcgcca taggcgccaa cgtttaagcc
     1381 aagcgccaca atgccaactg taatggcgtc aagtgtcaca ccaaaatgag gcaggacata
     1441 gaacaaccaa aaaagctgca caagtgcaga tgtaccccga aacgtttcga tatatgtcac
     1501 agcaagccac cgaactggcc gcacaccata cattttgcca agtgcggcaa gcagcgccgc
     1561 cacaaccgcg accaaggcgc cacccgcagt cacttgtaaa gtgacgagca gccctcttaa
     1621 aagctctggt acaaactcac ggaaaccaga aaaagtggcg gccacgagtc ctaacgtaaa
     1681 actcaatacg ctagcaacaa caatgaccgc cattcttcct tgcatcagat cgtatcaatg
     1741 aagtggttat tcacctgcac aatgctgcgc agccgtcttc tctggcagat tcgatgcatc
     1801 aaacccgaag acctcaacca tttcaagatg ctcaggtgta ccgatgaatt gcgctaattg
     1861 ctcattgacg gcatcgcgta aagccgtatc ttccgtgcgg aacccaaatg agccctcgcc
     1921 tttatatatc gtcccgtcgt gctcgaacgt gaagggttcg gcgcgttcaa tcgaatcatc
     1981 tttgctggct agatcggctg ccgttaatga cgtgaatgcc gccgctgagg ctctagacga
     2041 tttcacagca gcaacagccg ccgcaaaatc cggcacgacc aaac
//
LOCUS       DATBNL010000808         3660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_39247, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000808 DATBNL010000000
VERSION     DATBNL010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3660
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39247"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VIC30_13795"
     CDS             complement(<1..779)
                     /locus_tag="VIC30_13795"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY7805491.1"
                     /translation="MINHAAVTRAGTIRTRRQVLSRMSACLLVGSVPSVGFAQALPGR
                     LNVTGAGATLAARLFEAWGERLMTDTGERLTYASVGSTQGLALFRDRGLDFAASEIRV
                     PDDDIVDKRLMQFPVASAAIVLGVNLPGVSQAVRLTPAVVSAIYRGQIRYWHHPEIVR
                     INADLLLPDLAITPVSRLGSSGSTYSLTRYLTMNDEVWAKELGLRDRPDWDYGLLAKG
                     ALELRDIVMSTPGAIGYWLLDPASRDLTVSVHLGYPELGFVT"
     gene            823..1533
                     /locus_tag="VIC30_13800"
     CDS             823..1533
                     /locus_tag="VIC30_13800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805492.1"
                     /translation="MQHGDDIFEFGDVVDGDVDGHVDRLEPSLYTTALIQAAQSEPLP
                     SGLACEIGVGSGVCLLTLALKGYNELWGCDISPICIRATEQMLSHHAPHVTLNLQQGD
                     LWSAFETPLRFAVVLANLPHFPGQQAKDTRLPNWRGGDGRGLMDRFLSQLPTFLAPGG
                     VALITHHDLIGLAHTEALLENLGLQATCVLRWTVHENATRMASVTDQSLIEHCPTAQK
                     IGPYWFMDSRILRISHRD"
     gene            1526..3232
                     /locus_tag="VIC30_13805"
     CDS             1526..3232
                     /locus_tag="VIC30_13805"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY7805493.1"
                     /translation="MTNVTNRSAIAWLEPAWLVRWLWFVLLVILPIAGMASTNDGSQI
                     ADKALEGLITEQKLATQDCQRTSNTLQKALCAGVLRIGIRTTYKGFGVQAAGELVGFE
                     IDFARHIAKQLGVKPEFVPVTAADRIRKLIDGDIDMILATMAHTPDRGEVVSFIRPHY
                     YASPTAVAGLKSRDISGLEDLEFVSICVPLGSYANITFAQASARMLIFSKPQRMFDAL
                     RFGACDLVAHDRSLILGEITGPLAPDDMQARYEEKFSFNDIAWGMAVRHEDADTLGRA
                     LALITASAHGQGLMIDLANRHGVNAPFLDDQNKMWQGRNCFLPDGSFRPDCLIEAPPI
                     GDAPSQIAAEVNAAQQWLMKHFGIEVRLPMLSGEEGFRLFKSGIVVSIIMVIGVIAAT
                     ILFGLLFYGLERSRWVPLRLLSRTIRTLCMNAPVVLLLVFAYLIMSGFTLYSAPVAVL
                     TAVLAIGLNNGAPAGDSLIAASKTLGQAATLRGSINVSIVQLRACVINAAKSSPIGAF
                     IGAPELLSVLTDITSFSGERAVTFTLLAIFYILMVQTVVLASGWVVRLIQQAPLERVR
                     HA"
     gene            3225..>3660
                     /locus_tag="VIC30_13810"
     CDS             3225..>3660
                     /locus_tag="VIC30_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805494.1"
                     /translation="MLDFHNFGLFLQAFTINLRVGLLALVVGLLIGLVSATIRFRNKG
                     ATSRLTGFLIGFLRAFPVYVLMFVAVNLLASLGIFDALSPNQAAEAALIVALSAYTIS
                     ACSDASLTFLQHRATGQHAQAWLVVPNIIQIYVITVISSSVGA"
BASE COUNT          818 a          993 c          973 g          876 t
ORIGIN      
        1 gtgacgaacc caagctctgg gtagccaagg tggacactaa cggtcaaatc gcgcgacgca
       61 gggtcaagta accagtatcc gatcgcacca ggcgtagaca tcacaatgtc ccgtaactcc
      121 aaggcacctt ttgccaataa accataatcc caatcagggc gatccctcag gccaagttct
      181 tttgcccaaa cctcatcatt catcgtcaag taccgagtca aagagtaggt cgagcccgag
      241 cttcctagtc gagacactgg cgtaatcgct agatcaggga gcaagaggtc ggcattgatc
      301 cgaacaatct cgggatgatg ccagtaacgg atctgaccac ggtagatggc tgagactacc
      361 gccggcgtta accgaaccgc ttgtgacaca cctggcagat tcacaccaag cacaatcgct
      421 gctgaggcca ccggaaattg catcaaacgc ttatcgacaa tatcgtcatc tggtacgcga
      481 atctcgctcg ccgcaaaatc aaggccgcgg tcgcgaaaca gcgccagacc ttgcgttgaa
      541 cccaccgacg cgtaagtcaa ccgttcaccg gtgtccgtca tcaagcgctc gccccacgcc
      601 tcgaacagtc gtgctgcaag cgtggcgcca gcgcctgtga cattcaaacg gccaggcagc
      661 gcttgggcaa atccaactga cggcaccgag cccaccaaca ggcaggcaga catccgggat
      721 agcacttgac gacgcgtgcg gatagtaccg gcgcgcgtaa ctgcggcatg gttaatcatg
      781 gttaaatagg aaacctaata ctgttttcag attactacat acatgcaaca tggcgatgac
      841 atttttgagt ttggtgatgt cgttgacggt gacgtcgatg gccatgtaga ccgtcttgag
      901 ccaagcttgt acaccaccgc gctgattcag gcagcccaat cagagcctct acctagtgga
      961 ctagcgtgtg agatcggtgt ggggtcaggc gtctgtttat tgacgctggc gctcaaaggg
     1021 tacaacgaac tatggggctg tgacatcagc cccatttgca ttcgtgcaac cgagcaaatg
     1081 ctcagtcatc acgcccctca cgtcacgctg aatttgcagc agggtgacct ttggtcagcg
     1141 tttgagacac cactgcggtt tgcggtggtg ttagccaact tgccccactt tcccggtcaa
     1201 caggccaaag acacgcgtct gccaaattgg cgtggtggcg atgggcgagg tctgatggat
     1261 cgatttttga gtcaattgcc gacgttttta gcgccaggtg gtgtggcgtt gatcacacat
     1321 catgatttga ttggtttggc acacacagaa gccttacttg agaacctcgg tttgcaggcc
     1381 acctgcgtgt tgcgttggac cgtgcatgaa aacgcaacac ggatggcgtc agtaactgac
     1441 cagtctttaa ttgagcactg cccaaccgct caaaaaattg gtccttattg gttcatggat
     1501 agtcggattc tgaggatctc ccatcgtgac taatgtgacc aatcgctcgg ccattgcctg
     1561 gttggaaccg gcttggctgg tgcgttggct atggtttgtc ttgttggtga tactgccgat
     1621 tgctgggatg gcctcgacaa acgacgggtc tcagatcgct gacaaagcat tggaagggct
     1681 gatcaccgaa caaaagcttg ctacccaaga ctgtcaaaga acaagcaaca ccctgcaaaa
     1741 ggccctgtgc gcgggtgtgt tgcgcatcgg aattcgaacc acttataaag gctttggggt
     1801 gcaggccgcc ggcgaattgg tgggattcga aatcgatttt gccagacaca tcgccaagca
     1861 acttggtgtc aaaccagaat ttgtcccagt aaccgccgct gaccgcattc gcaagctcat
     1921 cgatggtgac attgacatga ttttggcgac catggctcac acgccagacc gcggtgaagt
     1981 ggtgtcgttt attcgcccgc attactacgc ctcacccaca gcagtggctg gcctgaagtc
     2041 tcgggacata tcaggactcg aggacctgga gtttgtatcg atctgtgtgc ccttgggtag
     2101 ttacgccaac atcacgtttg cgcaggcgag tgcgcggatg cttatttttt ccaagccgca
     2161 acgtatgttt gacgcattac gattcggcgc ctgtgatctg gttgcccacg atcgatcgct
     2221 catactgggc gagatcaccg ggccactggc cccggacgac atgcaggcgc gctacgaaga
     2281 aaaattctct tttaacgaca tcgcctgggg catggcagta cgccacgagg atgccgacac
     2341 gcttggtcgc gcactcgctt taatcacagc gagcgcccat ggacaggggc tcatgattga
     2401 ccttgccaac cggcatggcg tgaatgcccc gtttttagac gatcagaaca aaatgtggca
     2461 aggcagaaac tgcttcttgc ctgatggttc gtttaggccg gactgtctga tcgaagcacc
     2521 gcccatcggg gatgcaccga gtcaaatcgc agccgaagtc aatgcagcgc agcagtggtt
     2581 gatgaaacac tttgggattg aagttcgcct acccatgctg tctggtgaag aaggctttcg
     2641 cttatttaaa agcggcattg tggtgtcaat cattatggtc attggcgtga ttgccgcgac
     2701 catcctgttc ggcctactgt tttacggact cgaacggtca cgttgggtgc ctttgcgctt
     2761 acttagtcgc accatcagaa ctttgtgcat gaacgcaccc gtggttttat tattggtgtt
     2821 cgcctatctc atcatgtcag gctttacgct ttacagcgca ccggttgccg tgctcacggc
     2881 ggtgctcgcc atcggtctta acaacggtgc gcctgcaggg gactcattaa tcgcggcatc
     2941 aaagacgctc ggccaagcgg ccacactgcg tggctcgatc aacgtcagta ttgtgcagtt
     3001 gcgtgcctgc gtgattaatg ctgccaaatc tagtcccatt ggtgccttca tcggtgcccc
     3061 cgagttgcta tcggtgctca ctgatatcac ctcgttttcc ggggaaagag cagtcacttt
     3121 cacgctactg gcaatcttct acattctgat ggttcaaact gtcgtccttg ccagcggatg
     3181 ggtagttcgc ctgatacaac aagcaccgct tgagagagtg cgccatgctt gactttcata
     3241 actttgggct gtttctccaa gcgttcacca tcaacttgag ggtcggactg ctagcgctcg
     3301 tggtgggact actgattggg ttggtatcgg cgacgattcg tttccgaaac aaaggcgcca
     3361 cgtctcgact aactgggttt ttaatcgggt tcttgcgagc cttcccggtc tatgtcttga
     3421 tgtttgtagc agtcaacttg ctcgcttctt taggtatatt cgacgcgctg tcgccgaatc
     3481 aggccgctga agcagcgctt atcgtcgcat tatctgcgta caccatatct gcctgctcag
     3541 acgcatccct gaccttctta caacaccgag caaccggtca acacgctcaa gcctggcttg
     3601 ttgtgcctaa catcattcag atctatgtga tcactgtcat cagcagcagc gtcggtgcta
//
LOCUS       DATBNL010000809         3873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_178920, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000809 DATBNL010000000
VERSION     DATBNL010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3873
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178920"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(330..2693)
                     /locus_tag="VIC30_13815"
     CDS             complement(330..2693)
                     /locus_tag="VIC30_13815"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008160293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEY7805495.1"
                     /translation="MSKLDLSIDGMTCAACVRRVETVLKKVPGVTQANVNLAARRAAL
                     EIDNTLTSKDLNTQLLAAVEKAGFVGEVQDPEAQAHSLQDKSTAEINTLKQQVWIAAL
                     LTLPVFVMEMGGHMIGAFHHWVNSVMSLGTQHVIQAVLTTLVLAWPGRHFFTHGFKAL
                     FQGQPEMNSLVAVGAGSAWLYSMVVVLAPAIIPESARHVYFEAAAVIVTLILLGRLFE
                     ARARGQTGAAIEHLIGLQPKQARLIDPNSNTETDVAIESVKPGDLLRVRPGEKIPVDG
                     EIVEGTPFIDQSMITGEPVPAELKPGEAVAGGTINTTVGFTFKATHTGSDTVLARIIR
                     MVQSAQNAKLPIQATVDKVTSVFVPIIMAIAVVTFITWYALTQDISASLVASVAVLII
                     ACPCAMGLATPTSIMVGTGRAAQLGVLFRQGDALQQLKSTSIVAFDKTGTLTQGHPSL
                     TSFELVKTDKIDNKNNAEALNKDLVLQLVAAVQRQSEHPIARAIVDAADETQAEQAKH
                     QATLSVQGFEAVKGFGVKAKVVSLDAANESTHKIAVGSAALMQQLGIDTGDLQSKVNA
                     WAEQGQTPIHVAIDNQLVAVMAVSDPIKSEAKRTIEQLRSRGIECAMITGDHELTANA
                     VAKQLGIDIVRAQVRPEDKAAVVKSLQSPIEDPHKNKRAKPIVTFVGDGINDAPALAT
                     ADVGMAIGTGTDVAIESASVVLMSGELNKVVTAIDLSRATLTNIHQNLFWAFAYNVAL
                     VPVAAGVLYPINGTLLSPMLAAGAMAFSSLFVVSNALRLRFIRPSST"
     gene            complement(2787..>3873)
                     /locus_tag="VIC30_13820"
     CDS             complement(2787..>3873)
                     /locus_tag="VIC30_13820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="geranylgeranyl reductase"
                     /protein_id="HEY7805496.1"
                     /translation="TVMQAATRVKGVMCHGPRGGSLRIPSELAVLPRQTLDACLFERA
                     QAVGARTLTKARYQKPTANAHGRVTGAVVNLNAQTVNIEAKWTILATGASVPALKASG
                     HCTQPLPSAMGLRAYIHHPNFLDDDGQAIEHLHISWHKAYAPGYAWIFPCPGGIFNVG
                     VGLYGMHETQRSSSGRGQGRAQGNTPGLTGMFNTPAKKQNLADLFERFTQVNPMAKRL
                     VETGRMIGDIKGAPLRCSLDGAKPAAPGMLITGEAMGSTYALTGEGIGKAMETGILSA
                     QALLTRGQDAAIMQTYTDMLKDLKPKFTIYEQANKINRAPWLIDLAIARGNRSPRLVA
                     RMSRVLEEKANPAKLFTWRGAWKFLTE"
BASE COUNT          811 a         1047 c         1079 g          936 t
ORIGIN      
        1 ttaaatttaa ttataaagca ttgctttcct ttttgataaa ttatgtttag tggtttcgct
       61 aggctttgtg gcgctgttca atgttttcgg tagctttatt cgagcaagtg gtctgttttt
      121 tcggaaactg cgcactttgc gggcaactac ccatggtttc gtgaaggact agcgaacttg
      181 cggttcgctg cgcctgacaa tctaatgtct agcaacccaa gcctttgaaa tggccactga
      241 tgactgggac gcaagtggtg gctgaaatca gtcacacgcg cttactacga cgcgcctgct
      301 tcaggctcat tcgcgatgtc agatgcctat taggtggaac tgggccgaat aaaacgcaac
      361 ctaagcgcat tgctcaccac aaacaaacta gaaaacgcca tggcgccagc tgcgagcatg
      421 ggcgagagca gagttccgtt gatggggtag agcacgccgg ctgccacagg taccaaagcc
      481 acgttgtagg caaacgccca gaataggttc tgatgaatgt tggtgagcgt ggcgcgtgac
      541 aggtcaatgg ccgtgaccac cttgtttagc tcaccagaca tcagcaccac tgaagctgat
      601 tcaatcgcca cgtctgtgcc cgtaccaatg gccatgccca cgtcggcggt ggccaaggct
      661 ggggcgtcat tgatgccatc acccacgaat gtcacgatgg gtttggcgcg cttattcttg
      721 tgcgggtctt caatcggcga ttgcagcgac ttgaccaccg cagccttgtc ttcaggtctg
      781 acctgtgcgc gcacaatatc aatgcccagc tgctttgcca cggcgtttgc ggttaactca
      841 tggtcaccgg tgatcatcgc gcattcgatg cctcgtgagc gcagttgttc aatggtgcgc
      901 ttggcctcag acttaatggg gtcagagacc gccatgactg ccaccaactg attgtcaatg
      961 gccacatgta tcggtgtctg gccttgttcg gcccaggcgt tgaccttcga ttgcagatca
     1021 cccgtgtcaa tgcctagctg ctgcatcagt gcagccgagc cgaccgcgat cttgtgcgtg
     1081 ctttcgttag ccgcatcaag gctcacaact ttggctttga caccaaaccc ctttaccgct
     1141 tcaaaacctt ggaccgagag ggttgcctga tgctttgctt gttcggcttg ggtctcatca
     1201 gcagcatcaa caatggcgcg tgcaatcgga tgttcagatt ggcgctgaac ggctgccacc
     1261 agctgcagta ctagatcttt gttcaatgct tctgcattgt ttttattgtc aatcttgtca
     1321 gtcttgacca actcaaacga cgttagactc ggatggcctt gggttagcgt accggtttta
     1381 tcaaacgcta cgatgcttgt ggatttgagt tgctgtagcg cgtcgccctg acgaaacagc
     1441 accccaagtt gcgccgcgcg gccagtgcca accatgatcg aagtcggtgt ggccaagccc
     1501 atggcacacg ggcaggcaat gatgagtacc gccacagaag cgacaagtga cgcactgatg
     1561 tcttgagtca gggcatacca ggtgatgaaa gtcaccacgg cgatggccat gatgatgggc
     1621 acaaataccg acgttacctt gtcaaccgtg gcttgaatcg gcaacttggc gttttgtgcg
     1681 gactgaacca tgcggatgat acgtgccagt accgtatcgg aaccggtgtg cgtggccttg
     1741 aaggtaaagc caacggtcgt gttgatcgtg ccgccagcga ccgcttcacc aggcttgagc
     1801 tcagccggga ccggttcgcc ggtgatcatg gactgatcaa tgaaaggcgt gccctcaaca
     1861 atttcaccgt cgaccgggat tttttctccg ggacgaaccc gcagtagatc gccgggcttg
     1921 actgattcaa tggcaacgtc ggtttccgtg ttgctgtttg gatcaatcag tctggcctgc
     1981 ttgggttgta aaccgatcag gtgctcgata gctgcgcctg tttgaccgcg ggcgcgagcc
     2041 tcaaacagcc gacccagcaa aatcaaggtc acaatcacgg ccgccgcttc aaaatacacg
     2101 tgtcgcgcgg attcgggaat gatggcgggt gccagcacta ccaccatgga atacaaccag
     2161 gcactacccg cgccgaccgc cacgagcgaa ttcatttcag gttgaccttg aaacaacgct
     2221 ttaaagccat gggtaaaaaa gtgtcgcccc ggccacgcta gtacgagcgt ggtcagtacc
     2281 gcttgaatca cgtgttgcgt gcccagactc atcacactgt tgacccagtg gtggaatgca
     2341 ccgatcatgt gaccgcccat ttccatgacg aacacgggta aggtcaacaa ggcagcaatc
     2401 cagacctgtt gtttgagcgt attgatttct gctgtggatt tgtcttgcag cgagtgcgct
     2461 tgcgcctcgg ggtcttgaac ttcacctacg aagccggctt tttctacagc ggctaacaat
     2521 tgggtgttta ggtctttact ggttagcgtg ttgtcgatct caagggcagc gcggcgcgca
     2581 gccaagttca cattggcttg ggtgacgccc gggaccttct taagcactgt ctcaacccgg
     2641 cgcacacacg ccgcgcaggt catgccgtcg atagaaagat cgagtttgct catacccgta
     2701 ttgtagaaca gtcatcctca gggtctaggg ttctccctag gagcgaatcc ctagttgggc
     2761 tctatgcctc ttttcttggt tgtgaatcat tcagtcagaa atttccaggc gcctcgccat
     2821 gtaaaaagtt tggcggggtt ggctttttct tcgagaaccc gactcatgcg tgcaacgagc
     2881 cgtgggcttc gattgccgcg cgcaatcgcc agatcaatga gccaaggcgc gcggttgatt
     2941 ttgttggcct gctcgtaaat ggtgaatttc ggtttgaggt ctttaagcat gtcggtatag
     3001 gtctgcatga tggccgcgtc ctgaccacga gtcagtaacg cctgagcact caaaatccct
     3061 gtctccatgg ctttgccaat gccttcgccg gtcaatgcat aggtgctgcc catcgcttca
     3121 ccggtaatca gcatgccagg cgcggcgggt ttcgcaccgt caagcgagca gcgcaggggt
     3181 gcacctttga tgtcaccgat catgcgaccg gtttcgacca gtcgcttggc catcgggttg
     3241 acttgggtaa aacgctcgaa cagatcagcg aggttttgtt tttttgcggg ggtgttgaac
     3301 atacctgtca agccgggtgt gttgccctgg gcacgtccct gaccgcgtcc cgaactactg
     3361 cgctgcgtct cgtgcatgcc ataaagccca accccgacgt taaagatgcc gccgggacac
     3421 gggaaaatcc aggcatagcc tggcgcgtag gctttgtgcc aactgatgtg cagatgctca
     3481 atggcttggc catcatcgtc taaaaaattc gggtgatgta tgtaggcgcg caagcccatg
     3541 gccgatggca gtggttgcgt acagtggcca ctggccttaa gggctggcac tgaagcaccc
     3601 gtggccaaga tcgtccattt cgcttcaatg ttgacggttt gggcgttcaa gttgacgaca
     3661 gcgcccgtta ctcgtccatg ggcgttagct gtgggctttt gataccgcgc cttggtcagg
     3721 gtgcgcgcac caacggcctg ggcacgttca aacaaacaag catcgagtgt ttggcggggc
     3781 agaactgcga gctcacttgg gatacgcagg ctgccacccc ttggaccgtg gcacatgacg
     3841 cctttgactc gggttgccgc ctgcatcacc gta
//
LOCUS       DATBNL010000810         1753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_39275, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000810 DATBNL010000000
VERSION     DATBNL010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39275"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VIC30_13825"
     CDS             <1..482
                     /locus_tag="VIC30_13825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEY7805497.1"
                     /translation="ANVEDAMNAVLVNGDAVGQTLYYGKGAGEEPTASAVVADLVDVT
                     RLHTADPGNRVPHLAFQSDSLADIPVLPIEEVHSGYYLRMTVSDTPGVLADIAQVLAD
                     CNISIGSMIQEPAADGVATLIFLTHLALEKNVTAAITRVEVLPFMRSSVTRLRVETF"
     gene            482..>1753
                     /gene="thrC"
                     /locus_tag="VIC30_13830"
     CDS             482..>1753
                     /gene="thrC"
                     /locus_tag="VIC30_13830"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY7805498.1"
                     /translation="MNYVSTRGGMQPQLFQDVLLEGLAPDGGLAVPESIPTVSMQTLQ
                     SWRDLTYPELAAKVLGYFVTDIEPSTLSQMTARAYRSDVFRCETIVNVRELEDGLSLL
                     GVSDGPTLAFKDIAMQFLGQVFPHVLQARGTTLNILGATSGDTGSAAEYAMRGKPGLA
                     VFMLSPQGRMSAFQRAQMYSLLDDNIHNLAVRGVFDEAQDVVKALAGDLEFKETYRLG
                     AVNSINWARIASQVVYYFWGWLRATSNESQTVSFAVPSGNFGNILSGHIARRMGVPIR
                     RLVLATNENNVLEEFFRTGVYRPRLPAQTHATSSPSMDISRASNFERFVFDLLQGDAT
                     RVKALWQQLGSQGYFDLSDWRDQFERDYGFVAGVSSHENRLATIRRVFDETGTLIDPH
                     TADGVKVARQFVEPGVPMLVLETALPAKFSET"
BASE COUNT          373 a          426 c          511 g          443 t
ORIGIN      
        1 tggccaacgt tgaagacgcc atgaatgcgg tgttggtcaa tggcgatgcg gttggtcaaa
       61 cgctgtatta cggtaagggt gctggtgaag agccaacggc gtcagccgtg gttgctgatc
      121 ttgtggatgt cacgcgcttg catacggcag atcccggtaa ccgggtgccg cacctggcgt
      181 ttcaatctga cagcctggca gatattccgg tgctgccgat cgaagaggtg cacagtggct
      241 actatctgcg catgacggtc agtgatacgc ctggtgtgtt ggccgacatt gcacaggtat
      301 tggccgattg caatatctcg attgggtcaa tgattcagga acctgccgcc gacggggtgg
      361 cgacgttgat cttcttgacc catctggcct tagaaaaaaa tgtgacagca gcgatcacac
      421 gtgttgaagt attgccattt atgcgctcat cggtcacccg actgcgtgtg gagacttttt
      481 aatgaactac gtttcaaccc gtggcgggat gcaaccacag ttgtttcagg atgtgttgct
      541 agaggggctg gcaccagatg gtggcctggc agtgcctgaa tcgattccca ccgtctcgat
      601 gcaaacgttg caatcttggc gcgacctgac ttaccccgaa ttggctgcaa aggtgcttgg
      661 ttactttgtg acagatatcg agccgtccac actgtcacaa atgacagcgc gcgcttacag
      721 gtcagatgtg tttcgctgcg aaaccattgt gaatgtaagg gagttagaag acggtttaag
      781 tctgctaggc gtgtctgatg gcccgacact ggcatttaaa gacattgcca tgcagtttct
      841 tggtcaggta tttccgcacg tcttgcaagc acgtggcaca acgctcaata ttttgggtgc
      901 cacttctggc gatacgggct ctgccgctga atacgccatg cgtggcaagc ccggcttggc
      961 ggtcttcatg ctctcgccac agggccgcat gagtgccttt cagcgtgcgc agatgtacag
     1021 cctgctcgat gacaatattc acaatctagc cgtgcgtggc gtcttcgacg aggctcaaga
     1081 tgtggttaaa gcattagcgg gtgatttgga atttaaagaa acttatcgtc tgggcgcggt
     1141 gaactcgatt aactgggcta ggatcgcgtc tcaggtggtg tattacttct ggggatggct
     1201 gcgggcaaca tcgaacgagt cacaaactgt ctcgtttgcc gtgccctcgg gtaattttgg
     1261 caatatcttg tccgggcata tcgcccgacg catgggtgtg cccattcgcc gattggtgct
     1321 agcgaccaac gaaaacaatg tgcttgaaga gtttttccgc actggggttt atcggccgcg
     1381 attgccggcg caaacccacg cgacctcaag tccgtcaatg gatatttcgc gcgcatcgaa
     1441 ctttgaaagg ttcgtgtttg atttattaca gggtgatgcg acgcgggtta aagcactgtg
     1501 gcagcaacta ggctcacaag gttactttga tctgtcggac tggcgcgatc agtttgagag
     1561 agactacggc tttgtggctg gcgtcagctc acacgaaaac cgcttggcca cgattcgtcg
     1621 agtgtttgat gaaaccggca cattgattga tccgcacacg gccgatggcg tcaaagttgc
     1681 acggcagttt gttgaaccag gtgtgccgat gctggtactc gagaccgctt tgccggcaaa
     1741 gttttctgaa acc
//
LOCUS       DATBNL010000811         7559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_79486, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000811 DATBNL010000000
VERSION     DATBNL010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7559
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79486"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..127)
                     /locus_tag="VIC30_13835"
     CDS             complement(<1..127)
                     /locus_tag="VIC30_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015038768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEY7805499.1"
                     /translation="MKFVDEATIEVIAGKGGNGAASFRREKYIPKGGPDGGDGGRG"
     gene            complement(197..454)
                     /gene="rpmA"
                     /locus_tag="VIC30_13840"
     CDS             complement(197..454)
                     /gene="rpmA"
                     /locus_tag="VIC30_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017525699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEY7805500.1"
                     /translation="MAQKKGGGSTRNGRDSESKRLGVKAFGGEQIPAGSIIVRQRGTK
                     FHPGVNVGVGKDHTLFALKDGKVKFEVKGHLNKSTVSIIAE"
     gene            complement(481..792)
                     /gene="rplU"
                     /locus_tag="VIC30_13845"
     CDS             complement(481..792)
                     /gene="rplU"
                     /locus_tag="VIC30_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011002728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEY7805501.1"
                     /translation="MYAVIKTGGKQYRVAAGEKLKVEQIPADIGQEITLDHVLSVGEG
                     EQIKIGSPIVDGAVVKATVLAHGRHDKVKIFKMRRRKHYQKRQGHRQNFTEIRIESIT
                     A"
     gene            935..1861
                     /locus_tag="VIC30_13850"
     CDS             935..1861
                     /locus_tag="VIC30_13850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018574024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEY7805502.1"
                     /translation="MAAVDAVIRDRLDSEVVLIRTIGDYIIGAGGKRLRPALVLLLAK
                     NLGYEGDKQAVMAAVVEFIHTATLLHDDVVDDSDLRRGKSTANAVFGNPASVLVGDYL
                     YSRAFEMMVDVNSMDIMRIMAEATTIISEGEVLQLLNVNDPDVTEDRYLQVVRFKTAK
                     LFEAAACAGALLAQATTEQQLAAAAYGRHLGTAFQLIDDLLDYSGNAQTLGKTVGDDL
                     REGKPTLPLLRVLSVGTDEQKELIRSAIATGDGDFEAVAQAIQATDALEHTRKAAEAE
                     IDLAIDALSDLPDNEIRVVLQKVAGLSLRRDN"
     gene            2068..3417
                     /locus_tag="VIC30_13855"
     CDS             2068..3417
                     /locus_tag="VIC30_13855"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY7805503.1"
                     /translation="MTRADDANPSNTDSSNPSNIDPSNTNPTNVVSKHRTIVAGAAGN
                     VIEWYDFSLYGYMAAVLAQLFFPHENQLVSLIATYGVFAAGFIMRPLGGFVFGHIGDV
                     IGRKHALVLSVLLMVVPTILLGLLPTYDQWGVWAAVCLVLIRMLQGLSVGGEFSGSAT
                     YLAETAPPGRRGFAASWANIGSMIGMLLGAATPAVMLSLLSTSDVNDWGWRVPFLFGG
                     VLGVIALLLRRGLPEPEADDDDTTKRVGEHPIRSLVRDEPVAMTQAVIYAAGYGVLFY
                     IAMVYLPTWLSIYTSIALHEALFIATAAMLLQVVIIPIAGWVSDALVKRKILLTGTFL
                     VMAVIVAPLYALAGQGAHWEALTVLLVFAAIVAIPLGVTPALMAETFDRRHRLTGYSL
                     SFNLGFGIAGGTAPMVATWLIHQSGNSLSPAYYLIGCAMVAAVTLLTMRDRSREPLR"
     gene            3422..3616
                     /locus_tag="VIC30_13860"
     CDS             3422..3616
                     /locus_tag="VIC30_13860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805504.1"
                     /translation="MTPSSVAVVNEAALTVQGWWSMLAYVGDGYLTMKSALFCEEGRV
                     CLCGLRTDRYRYECCTSETC"
     gene            3682..3758
                     /locus_tag="VIC30_13865"
     tRNA            3682..3758
                     /locus_tag="VIC30_13865"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3716..3718,aa:Pro,seq:cgg)
     gene            3781..4188
                     /locus_tag="VIC30_13870"
     CDS             3781..4188
                     /locus_tag="VIC30_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011810737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HEY7805505.1"
                     /translation="MSLDFSPLASAVQRLEEGLARFGLDTSDVMVRDGLVQRFEFTYE
                     LSHKMLRRFLEATAANPTEFDEADFQYLIRTANEQGLLLGAWPQWRVYRDMRSKTSHT
                     YDEEVALKVVSGIPAFLKEAQFLLCQLEQRQKR"
     gene            4185..4511
                     /locus_tag="VIC30_13875"
     CDS             4185..4511
                     /locus_tag="VIC30_13875"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY7805506.1"
                     /translation="MTAKLPLMLDVTELAIVKAILVRHVPDAVVWVFGSRATGQSKKY
                     SDLDLCIKASHPLGLDVMSALAESFSESDLPWKVDLVDWHSISDAFRAIIDRDKLLLQ
                     QPSSKT"
     gene            4707..4829
                     /locus_tag="VIC30_13880"
     CDS             4707..4829
                     /locus_tag="VIC30_13880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805507.1"
                     /translation="MVRDGLVYRFKLSYELSHKMLHRFMEAASANPIEFDEADF"
     gene            5137..6066
                     /locus_tag="VIC30_13885"
     CDS             5137..6066
                     /locus_tag="VIC30_13885"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY7805508.1"
                     /translation="MDFTEVQAHDYESALQATPNLINTRLGPVEYATVGRGPVILSVH
                     GGPGGFDQGLALAMCFAKNGFQVIAPSRPGYLGTPLGTATNPQEQAAVLVALLDALEL
                     EQVIVVGASAGGPPTYALAQDHPDRVRALIEIDSVCMHYTKLQEISPVEQALYLSRPG
                     MWVVEWLMRHFPAMMIKQFLTTEGTLEGDELDKQVRQAVADPTELAFVRVMMQTMSTR
                     YEQRRPGLENDILMLTSLTAMPLDRIQAPTLIFHGAAERDVPAEQASYAAEQIRDAHL
                     HWIDKGSHIGFWVSEMALESQKLAIHWAHSHQN"
     gene            6402..7220
                     /locus_tag="VIC30_13890"
     CDS             6402..7220
                     /locus_tag="VIC30_13890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805509.1"
                     /translation="MLYQHFDGQYVPLIASLSWSIVVGIASFVLVYKTRLFNQLLVVP
                     LSAPFLALPALMFAFLMGFMSAEAWQNFANARSALINETSAISRLVNIPVQPPEYQAR
                     SIALLKTYLQTSLSDEWAGEHNQVTSDKASDSINQLEVNVWDARKQCAQSTTTSSAAC
                     MDSIATSAFIKGIDDLRSAREQRLSAGYELGITYKWSLVIFLAFIAALSVAAAHRQSQ
                     KTGVIALILFCLSLWVAFSMVSLHINPYKGRQSVVPTPLVHLLETLDKAANTGS"
BASE COUNT         1644 a         1905 c         2053 g         1957 t
ORIGIN      
        1 cgccgcgccc cccgtcgcca ccatcaggtc cacccttagg aatgtacttc tctcgccgga
       61 agcttgcggc gccattgccg cctttgccgg caatgacttc aatggttgct tcgtcgacga
      121 atttcataat ttttttccag aaaagacaaa agccctgccg caaacgacag ggctctgtct
      181 gtcgcgaccg cgcgaattac tcggcgatga tggacacggt cgacttattc aagtgacctt
      241 taacttcaaa cttcaccttg ccgtctttca acgcaaacaa ggtgtggtct ttgccaacac
      301 cgacgttcac gccagggtga aacttggtgc cgcgctgacg cacgatgatt gaaccggccg
      361 gaatctgctc gccgccaaag gctttaacgc ctagacgttt ggattctgaa tcacgaccgt
      421 tgcgggttga gccgccgcct tttttctgtg ccatggttta actcctgatt tcttcgctaa
      481 tcaagccgtg atcgactcga tacggatttc cgtaaagttt tgacgatgac cttggcgctt
      541 ttgatagtgc ttgcgacggc gcattttaaa gatcttcact ttgtcatggc gtccatgcgc
      601 aagaacggtt gccttgacca ctgcgccgtc aacgatagga gaaccgatct tgatctgttc
      661 accttcgccg accgacaata cgtggtctag cgtgatttct tgcccaatgt ctgccggtat
      721 ctgttctact ttcaattttt cgccagcggc aacgcgatac tgcttgccac cggtttttat
      781 gaccgcgtac atgggttaac ctcttggttt agggtaaatt tacgtatcgg taattaaccg
      841 aacccgtgaa tatagcctat aacttgttga aagtcaaaaa gattccgctg tgtctacccc
      901 tatcgctgag ctgctctccc ccattgctga cgacatggct gctgttgatg ccgtgattcg
      961 tgatcgcctc gattccgagg tggtactgat ccgtaccatt ggtgactaca tcatcggtgc
     1021 cggtggcaag cgtttgcgtc cggcgctcgt gctgttactc gctaagaacc tcggttatga
     1081 gggcgacaag caggctgtga tggctgctgt ggttgagttt attcacaccg cgaccttgct
     1141 gcatgacgat gtggtcgatg attctgatct gcgtcgcggt aaaagtactg ccaatgcggt
     1201 gttcggcaac ccggccagtg tgctcgtggg ggactacctc tactcgcggg ccttcgagat
     1261 gatggttgat gtcaacagca tggacatcat gcgtatcatg gctgaggcca cgacgatcat
     1321 ctcagaaggc gaggtccttc agttactcaa tgtcaatgac ccggatgtca ctgaagatcg
     1381 ctatctgcag gtggtgcgct ttaagacagc caaattgttt gaggctgccg cttgtgctgg
     1441 tgctttgttg gcgcaggcca caaccgagca gcaactggct gccgctgcct atgggcgtca
     1501 tttgggaacg gcgtttcaat taatcgatga cttactcgat tattcaggca atgcgcaaac
     1561 gctcggcaag accgtgggtg atgatctgcg tgaaggtaag ccaacgctgc cgttgttgcg
     1621 ggtgctgtca gtgggcaccg atgaacagaa agaactgatt cgctcggcca ttgccacggg
     1681 tgatggggat tttgaggcgg tggcgcaggc gatacaagcc accgatgcgc tcgaacacac
     1741 gcgtaaggct gcagaggcag agattgattt ggcaattgat gcactatcgg atctgcctga
     1801 caatgagatt cgggttgttc tgcaaaaagt ggcgggtctg tccctcaggc gtgacaacta
     1861 atatcggcta aacacgataa gccctgcttg tgaaacctgc tagaacgtca ctttttctga
     1921 cacacatcgc attgatgcgc cttgatgcgt gccataatgc accagccttg tgcatgttca
     1981 cgcatgaact cacatgatct ttatccatgg tcgcacatta tctgttaggg ttttatgtaa
     2041 cgaaggctgc ataagggacc cagatttatg accagagcgg acgacgctaa cccctccaac
     2101 actgactcct ccaaccccag caatatcgac cccagcaaca ccaaccccac caacgtcgta
     2161 tccaagcacc gaacaattgt cgctggcgca gccggcaatg tgatcgagtg gtatgacttc
     2221 tcactatatg ggtacatggc tgcggttctc gcgcaattat tctttccgca tgaaaatcaa
     2281 ctggtttctt tgatcgcaac ctacggcgtg tttgcggctg gattcatcat gcgtccgctt
     2341 ggcggtttcg tgtttggtca tatcggtgat gtcatagggc gcaagcacgc tttggtcctc
     2401 tcggtgttgc tcatggtggt gccgaccatc ttgctcggat tactcccaac ctacgatcag
     2461 tggggtgtct gggccgcggt ctgcctagtt ctcatccgca tgcttcaggg tctatcggtg
     2521 ggtggtgagt tctcggggtc tgcgacctac ctggccgaaa ccgcaccacc cggtcgccgc
     2581 ggctttgccg caagctgggc caacattggc tcgatgatcg gcatgctact cggtgccgcc
     2641 accccggcgg tcatgctttc gctgctcagt acgtccgatg ttaatgattg gggctggcgt
     2701 gtaccgttcc tgtttggtgg cgtgcttggc gtgatcgcgc tgctgctcag acgcggccta
     2761 ccggagcctg aggccgacga tgatgatacg accaagcgag tcggcgagca cccgatacgt
     2821 agtttggtgc gcgatgagcc cgttgcaatg acccaggcgg tgatctatgc cgccggctat
     2881 ggtgttcttt tctatatcgc gatggtgtat ctgccgacat ggctttcgat atacaccagc
     2941 atcgcattgc acgaggcgct gtttatcgca acggcggcaa tgcttcttca ggttgtcatc
     3001 atcccgattg ccggttgggt ctcagacgct ctggtaaagc ggaagatttt gttgacgggc
     3061 acgtttctgg tcatggcggt gattgtcgcg ccgctttatg cgctggccgg acagggcgcg
     3121 cactgggaag cgttaacggt gcttttggta tttgctgcca ttgtcgccat cccgcttggt
     3181 gtgacgccag cgctaatggc tgagaccttt gataggcgcc atcgattaac cggttattcc
     3241 ctgtcgttta accttggctt tggtatcgcc ggtggcactg cgccgatggt agccacttgg
     3301 ctgatccatc aaagcggtaa ttcgctttcg cccgcctatt acttgattgg ctgcgcgatg
     3361 gtggctgccg ttacgctttt gaccatgcgc gaccgaagcc gtgagccgct gcggtaatgc
     3421 gttgacgccc tcatcggtcg ctgtcgtcaa tgaagccgca ctgacggtac agggttggtg
     3481 gtctatgttg gcctatgtcg gcgatggcta cctgaccatg aaatccgcat tgttttgcga
     3541 agaggggcgg gtttgtctgt gtggcttaag aaccgaccgg tatcggtacg aatgctgtac
     3601 cagtgaaacc tgctagaatt tcagtctttc tggcgctcgc cggattcccg aggcagcaca
     3661 agctgtctga tatgccgaca tcggggcgta gctcagcctg gtagagtact gcgttcggga
     3721 cgcaggagtc ggaggttcga atcctctcgc cccgaccaga aacagatcag caggtgtttc
     3781 atgtctctag acttttctcc tcttgccagt gctgttcaac gacttgaaga agggttggct
     3841 agatttggct tggacacatc ggatgtgatg gtacgagacg gcttggtgca acgctttgag
     3901 ttcacttatg agctgtcaca caagatgcta cgccgctttc tggaagccac agccgcaaat
     3961 ccaacggaat tcgatgaggc tgactttcag tatttgattc gcactgcaaa tgagcaggga
     4021 ttgttgctag gcgcttggcc tcaatggcgt gtctatcgag atatgcgctc gaaaacgagc
     4081 cacacatacg atgaagaagt ggcactaaag gtagtgtctg gcatacccgc tttcttaaaa
     4141 gaagcccagt ttttgctttg tcaattagag caaagacaaa agagatgacc gccaaactgc
     4201 cactcatgct agatgtgacc gagttggcga ttgtgaaggc tatcttggtt agacatgttc
     4261 cggacgctgt tgtgtgggtc tttggctctc gcgccactgg tcaatcaaaa aaatattctg
     4321 acctcgattt gtgcatcaag gcaagccacc cactgggcct cgatgtgatg agtgcgttgg
     4381 cggaaagttt ttctgagtct gacttgccat ggaaggtgga tctcgtagac tggcacagca
     4441 tcagtgatgc ctttagagcg atcattgatc gtgacaagct tctgctgcag caacctagtt
     4501 ccaaaactta gattacaggt ttgatagcac tgcgttcggg acgcaggagt cggaggttcg
     4561 aatcctctcg ccccgaccag tcaaaaatag cgcttcattt gaccatttgg tctagtgcat
     4621 ctcgaatcct gctcattgga aagtgccgtt cagcgccttg gtgaaggcct ggctagatac
     4681 aacgctgaca cggccgacgt catggcatgg tgcgtgatgg gctggtgtac cgttttaagc
     4741 tctcttacga gctgtctcac aaaatgctgc atcgttttat ggaagcggct agcgcaaatc
     4801 cgatcgagtt cgatgaggcc gacttttaat atttgattcg ctcggccatc gaacaaggtt
     4861 tgttgcttga agcatggcct caatggagtg tgtatcgaga catgagagca aaaacaagtc
     4921 acacctagga tggggaagta gctttgaaag tagtggcagg catatcggac ttgcttaaag
     4981 aggctcagta tttgcttgaa cagttgctac acaagcaaag gtcatggatg gcgtgtcgcc
     5041 gcctaccgcg cgcatagcaa gcatggcttg attcagcgca agggatatgt tctcggtttg
     5101 atatagactg atgtcattga acatcggagg catgtcatgg atttcacaga agttcaagcc
     5161 cacgattatg agtccgccct gcaagctacg cccaacttaa tcaacaccag actcgggccg
     5221 gttgagtacg cgacagtggg acgggggcct gtaattttgt cggttcatgg tggtcctggc
     5281 ggttttgatc aaggattggc tctcgccatg tgttttgcca agaacggttt tcaagtgatc
     5341 gcaccatcac gtcccggcta tcttggcacg cccttgggca ctgctacaaa tcctcaggag
     5401 caagcggcag tgctggttgc tctgctcgat gcccttgagt tggagcaagt aattgtggtg
     5461 ggtgcttctg ctggtggacc cccgacttat gccttggctc aggaccatcc tgatcgcgtc
     5521 agggcactga ttgaaattga ttcggtttgc atgcactaca cgaagttgca agagatctct
     5581 cccgttgaac aagcccttta cctgagtcgt ccaggcatgt gggtggtaga gtggctcatg
     5641 cgccatttcc cggccatgat gattaaacag tttctcacga ccgaggggac actagagggt
     5701 gatgagctcg acaaacaagt acgtcaggcg gtcgcggatc caaccgagct ggcgtttgtt
     5761 cgggtcatga tgcaaaccat gagtacgcgc tacgagcaac gtcgcccagg acttgaaaat
     5821 gatattttga tgctgacctc gctcactgcg atgcctttgg atcggattca ggcaccaacg
     5881 ctgatatttc acggggcagc cgagcgagat gttccagcag aacaggcgag ctatgcggct
     5941 gagcagatcc gtgatgcgca cttgcactgg atcgataagg gatcgcatat cggcttctgg
     6001 gtgtcagaga tggcgctaga gagtcaaaaa ttggctattc actgggcaca cagccatcaa
     6061 aactgatccg cgattgcttc gatacctgac agctcttgcg tgctggcgtt cgtgactaat
     6121 gtatttgcac tacggcaacg ttgtgacgct atttatcgtt taataagcgt acctacaacg
     6181 tgtagttagc ctagggacac tgtttcggga cgcaggagtc ggaggttcga atcctctcgg
     6241 cccgaccaag tttcagaatt agatcaaaca cagaaccaac cccaaatcgt gtcccgccag
     6301 tgccggatgg tgggttgaga ccggtttgcc tagtaaaact gcatgttgag gattccgtgc
     6361 gttttgccgt atgatcaaaa aaaaacagta aggcgctggc tgtgctctat caacactttg
     6421 atggtcaata tgttcccctg atcgccagct tgtcttggag cattgttgtt ggcatcgctt
     6481 catttgtctt agtctacaag accagactgt ttaaccaact gctcgtggtg ccgctatcag
     6541 ccccattttt ggcgctgccc gcactcatgt ttgccttttt gatggggttc atgtctgccg
     6601 aagcctggca aaactttgct aatgcgcgtt ccgcgctcat taatgaaacc tcggcgatat
     6661 cgcgtctggt caacatacca gtgcagccac ctgagtatca agcgcgctct atcgcattgc
     6721 ttaaaacata tttgcaaacc agtttgagtg atgaatgggc aggcgagcat aatcaagtca
     6781 ctagcgataa agccagtgat tcgattaatc aacttgaagt caatgtctgg gacgcacgca
     6841 agcagtgcgc ccagagcacg acgacctcct ctgccgcctg catggattcg atcgcaacct
     6901 ccgcattcat caagggcatt gatgatttaa ggagtgccag agagcagcgg ctatccgcag
     6961 gatatgagct cggtatcact tataaatggt ccttggttat ctttctggca tttattgcag
     7021 cgctaagtgt ggctgctgcc cacagacagt cacaaaagac tggggtcatc gccttgatac
     7081 ttttttgcct aagtctttgg gttgcgttca gcatggttag cttgcacatc aatccatata
     7141 aagggcgaca gtcagtggtg ccgacaccac tggttcattt gttggaaacg ctcgataagg
     7201 cagcgaacac gggtagctag tttgtgttga ttacgggcgt ttatgagaaa gcagcgcttt
     7261 cgttgctaga tacttctaag tcatattcag aagcgatagc cggtgcgatg tacaccgaca
     7321 tgatgaatgg tttcatcttt gattcagaca gcgttgcatt gttcaagcgt attggaaaag
     7381 accagttcga gcagtggtac ggccacttgc caggcgctaa caacaaaagc agtgtagctt
     7441 cttgcactct ctacacacga caataattac caaataatta tcgggcctgg ggcactgttg
     7501 cgggacgcag gtgccgaggg ttcgaatttt ttgatcccca agcagagctg aagtgcgac
//
LOCUS       DATBNL010000812         3061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_19607, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000812 DATBNL010000000
VERSION     DATBNL010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19607"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1073
                     /locus_tag="VIC30_13895"
     CDS             <1..1073
                     /locus_tag="VIC30_13895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEY7805510.1"
                     /translation="ATVSFTAPTFTGVPPGVTQYRVTSDPGAITATGSASPITVTGLT
                     NGTSYTFSVQATNGVQFGPAGVSGSVTPEGLIALMSGGGVSGSGAVINKLLIATTGNA
                     TDFGDLTRNVTTTGSVGGETRALMGGGNSSSDVTIDFVTFATEGNATDFGDLTTGRNE
                     LAGAGNAIRGLFACGSNKNVIDYVTIATAGNAIDFGDRSIATNDIGALSSSSRAVFGG
                     SGNGLNIMDYVTIASTGNAIDFGDLTQGAQSPAGASSSTRGLFMALNTGTGTNVINYI
                     TIASTGNAIDFGDAIQARGSGPAGASSETRALLGGGYLSVSLNSVEFFTIASTGNGTD
                     FGDLTVASYRISGCSNAHGGLA"
     gene            1073..2101
                     /locus_tag="VIC30_13900"
     CDS             1073..2101
                     /locus_tag="VIC30_13900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805511.1"
                     /translation="MSDKRYLGNIITPTPTEPAGPFQDDAAPGVWSLQEAFTYTKAGL
                     WPTAGNVDPSNRGVFAGGINGSVVAVNTIDYISIPNTGNATDFGDLTSAKYNIGALSS
                     ATRGLFSGSESFSNTVDFVTIATTGNASDFGDLTTTSGNGAGCSSSTRGVFAIGLTTT
                     DVYSNVLCFVTIATAGNATDFGDLSLARRSSAGCSSSTRGVFSGGSIGGGPPFNTNVI
                     DFITIASAGNATDFGDLSSADDATSNVSSSTRGVISVGSGNVLEFITIATAGNATDFG
                     DLTNVTGNMGGCSSLIRGVFAGGNNFGDNVMEYITIASAGNATDFGDLTVGRFGGNAC
                     SNAHGGLS"
     gene            2153..2995
                     /locus_tag="VIC30_13905"
     CDS             2153..2995
                     /locus_tag="VIC30_13905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805512.1"
                     /translation="MTDKTNALVVQDIAIQLPDAKPEYKSMLTNIAEKAPAVAQATSN
                     FHKSHSQFMGVTLDVTAITPVRSIKHTLAEIDRTRSALQEAYIGMRKKENKLKKLERK
                     LEDETDDLERELLEIKIVEAQSHLESTRNHVQGAIRKLNFFTNQYDNLMKKIGKDELT
                     EEDYELEEVKYHIMTCMKQALTAARSRGGSIDEGNMIYIFDLGLPAAEAQMEVYAYLS
                     WENEMMAQGKAPQHSDTVAWLEKCADKWAHCPAEFANSRGFQILDRTSLTNVALEDHS
                     KGDE"
BASE COUNT          735 a          787 c          837 g          702 t
ORIGIN      
        1 aggcaactgt tagtttcacc gctccgacct ttacaggtgt gcctccgggt gtgacccagt
       61 accgtgtgac ctctgacccc ggtgcgatca ctgcgacagg atcagcttct ccaatcactg
      121 tcacaggcct gaccaatggc acaagctaca ccttctcggt gcaggctacg aatggtgtgc
      181 agtttgggcc tgcgggggtc agcggaagtg taaccccaga gggtctcata gcactcatga
      241 gcggcggtgg cgtgtccggt tctggtgctg ttattaataa gcttttgatt gcaaccactg
      301 ggaatgcaac tgattttggc gacttgacta gaaatgttac gaccacaggt tctgtgggtg
      361 gggagacccg tgccttaatg ggtggcggca acagttcctc tgatgtaaca atcgactttg
      421 tgacatttgc aactgaaggc aacgccaccg actttggcga cctcacaacg ggcagaaacg
      481 aacttgctgg cgcagggaac gcgatcaggg ggttgttcgc ctgtggctcc aacaagaatg
      541 taattgacta tgtgacgatt gcgaccgccg ggaacgcaat tgactttggc gaccgcagca
      601 ttgcgacaaa cgacattggg gctttgtcta gttcttctcg tgcggttttc gggggctctg
      661 gaaacggctt aaacataatg gattacgtca caattgcatc aaccggcaac gcaattgact
      721 ttggcgacct aacacaagga gcgcagtctc ctgcgggggc cagctcaagc actcgcggtt
      781 tgtttatggc cctaaacacg gggacaggaa ccaatgtgat aaactacata accattgcgt
      841 ccactggcaa tgcaattgac tttggcgacg cgatccaagc tcgcggctct ggccctgcgg
      901 gggcttcttc tgaaactcgc gctcttttag gaggcggata tttaagcgtc tctttaaaca
      961 gcgttgagtt ttttactatt gcgtccaccg gaaacggcac agactttggc gacttgacgg
     1021 tcgcgtctta tagaatttct ggttgctcca acgcccacgg aggactcgca taatgtccga
     1081 caaacgctat ctcggcaaca tcatcacgcc gacgccgacc gagcctgctg ggccgtttca
     1141 agacgacgcc gcaccgggcg tgtggtcgct gcaggaggcg tttacctaca cgaaggcggg
     1201 gctgtggccc acggcgggga atgttgatcc atcaaatagg ggtgtttttg ctggcggaat
     1261 aaatggatca gttgtagccg taaatacaat agattatatt tcgataccaa acacaggaaa
     1321 tgcaacggat tttggagacc ttactagcgc caaatacaat atcggcgcac tctcctcagc
     1381 aactagaggg ctattttcgg gttctgagtc tttttcaaac accgttgatt ttgtaacgat
     1441 agccactacc ggcaacgcct cagactttgg tgatctaact acgacatcag gtaatggagc
     1501 aggctgctca tcctcaacgc ggggagtgtt tgctataggg ctaactacga ctgatgttta
     1561 ctctaacgtt ttgtgtttcg ttacaatcgc taccgcaggc aatgccacag attttggcga
     1621 tctgtccttg gctagacgca gttctgcggg ctgctcatcg tcaactcgtg gtgttttttc
     1681 cggtggatca attggtggtg gccctccgtt taacaccaac gtaatagact tcatcactat
     1741 tgcttcggcg ggtaacgcta ccgactttgg cgacctgtct tcggctgacg acgccaccag
     1801 caatgtttcc tcctctacaa gaggtgtcat aagcgttggt tcgggtaatg ttcttgagtt
     1861 catcactatt gccacggctg gaaacgctac tgactttggc gatctaacaa acgtaaccgg
     1921 aaacatgggt gggtgctctt cgttgatacg cggagtgttt gctggtggaa acaatttcgg
     1981 tgataatgtt atggaataca taaccattgc atctgctggc aatgccacag attttggtga
     2041 tctaacagtg ggccgttttg ggggtaacgc ctgctccaat gcccacggcg gcttgtccta
     2101 actcaacaag ccccgtatac tccccagcac acgcttatat gggagtaagc acatgaccga
     2161 taagaccaat gcacttgtag tgcaggatat tgctattcag cttcctgacg cgaagcccga
     2221 atacaaatca atgctgacta atatcgccga gaaagcgccc gccgtggcgc aggcgaccag
     2281 caacttccac aagtcgcact cgcagttcat gggcgtcacg ctcgacgtga ctgctataac
     2341 gcccgtgcgt tcgatcaagc acacgctggc cgagatcgac cgcacacgct ccgccttgca
     2401 agaagcctac atcggaatgc gcaagaagga aaacaagctg aagaagctgg agcgcaagct
     2461 ggaggacgag actgacgacc ttgagcgcga gctgctggag atcaagatcg tcgaggcgca
     2521 atcgcatctc gaaagcaccc gcaaccatgt ccaaggtgcg atccgcaagc tcaacttttt
     2581 caccaaccag tacgacaacc tgatgaagaa gatcgggaag gacgagctga cggaagaaga
     2641 ctacgagctt gaggaggtca agtatcacat catgacctgc atgaagcagg cgttgactgc
     2701 ggcgcgaagc cgtggcggct ccatcgatga aggcaacatg atttacatct tcgatctggg
     2761 cctgcctgcc gccgaagcgc agatggaggt ctatgcctat ctgtcgtggg aaaacgaaat
     2821 gatggcgcag ggcaaggctc cgcagcactc cgataccgtg gcgtggttgg agaaatgcgc
     2881 ggacaagtgg gcgcactgcc ctgccgagtt tgcgaacagc cgtggctttc agattctgga
     2941 caggacatcg ctgacgaatg tggcactgga ggatcacagc aagggggatg agtgatggga
     3001 cgcaaaccaa ctcctctgac gagagacctc atagagtcaa acacccagat tgtatctgaa
     3061 a
//
LOCUS       DATBNL010000813         2926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_119370, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000813 DATBNL010000000
VERSION     DATBNL010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119370"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..404
                     /locus_tag="VIC30_13910"
     CDS             84..404
                     /locus_tag="VIC30_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009517687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY7805513.1"
                     /translation="MALTRDFKETVAARVQSDPAFAQALLDEAITLFVNGEPESAKLI
                     LRDLVNATLGFEALALEIHKPAKSLHRMLSQSGNPTMSNISAVFSALKRALKVEVHTR
                     FVMA"
     gene            830..2146
                     /locus_tag="VIC30_13915"
     CDS             830..2146
                     /locus_tag="VIC30_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020384464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HEY7805514.1"
                     /translation="MHPTRIVVLGFLGAIVLGTLFLMLPLASATNESTPFLTAFFTAV
                     SAVCVTGLVVVDTGTYWSFFGQVVILLLFQLGGFGIMTAATLLGLMVNRSLRLKTRLI
                     AQTETHTISGGDLRATFKIVLFTTLIMEAIASVILVTIYLVRYSASFDVALWHGIFHA
                     ISAFNNAGFALYADGLTRFSSDFLFLLPIMIAVVVGGLGFPVFLDLRDKLLRRRSLSL
                     HSKITLTGTASLLVLGTVFILAFEWNNTGTLAAMSFPDKLLSSVFMSVSARTAGFNTV
                     DIGSLEQGTWAIHYLLMFVGGGSAGTAGGVKVGTFLILLLLVLAEIRGRRDTEIFGRR
                     VSNSVQREAITVLVLGSACVVVATFILLSTTDFPTDQVIFEVISAFATVGLSTGITAD
                     LPPIAQVTLNILMVVGRVGTITVAAALATSSVAHRYRYPEERPIVG"
     gene            2139..2858
                     /locus_tag="VIC30_13920"
     CDS             2139..2858
                     /locus_tag="VIC30_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019919998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEY7805515.1"
                     /translation="MDNFLFTERFAFSASDSVLVVGLGRFGSSVAQSLVTLGHEVMGI
                     DINEERVQDWSHRLTHAIQADSSNVDILRQLGAADFSHAIVGIGDNLSASLLTVMAMT
                     ELGIKDIWVKATNTAHGQIAERIGAHHVVYPEAAMGERVAHLISGKMIDFIEFDDGFA
                     IAKLQAPTLCHNLTLDESRIRELHDITVVGVKRLNEDFTYAKPETFIKPGDLLIVSGT
                     TASIEKFAAKTNQNKRPSKKG"
BASE COUNT          671 a          798 c          746 g          711 t
ORIGIN      
        1 atcgatcagg cggtggcgct gtggggaaac tacaaacgcc gtaaggcatc aaccgggcaa
       61 ggaaaggaat aaggaaacta aacgtggcac tgacccgaga tttcaaagaa actgtggctg
      121 cgcgtgtgca gagcgacccg gcgtttgcgc aagcgctgct ggacgaagcc atcacgctgt
      181 tcgtcaatgg cgaaccggaa tccgccaagc tgattctgcg cgaccttgtc aacgccactc
      241 tgggattcga agcactggcg ctcgaaatac acaagcctgc gaaaagcctg caccgaatgc
      301 tgtcgcagtc tggcaacccg accatgagta acatctcggc cgttttttcc gctctcaaac
      361 gcgccctcaa ggtcgaggtg cacacccggt tcgtcatggc ctgactttca ggaggtgttt
      421 tgttcttacg gacccgcaat ccgtgcaggc tctagaaaat gacatgccag cccccaatac
      481 ccatcactca accaccatca gaccggatcg agccgtaagt catgggccga atcggtgtgc
      541 tagcgccgat gcagcaaccg tccccaggaa acccacctta aaccactcaa gtgtttgccc
      601 ctcacacctt gaaacggttg caaatggtaa gttgcagcgc cgctggaaag tcgatcatgc
      661 cgatttcatc gcgatgtaca acaaaacagt gaacatagaa ggcctgccgc ttgaacaatg
      721 gcgtggtttt tgatgtgagg agcagccagc acagccgcgc ctagtgcaac aacactaaac
      781 tggtttcagc agtaacattc agtgatcgtt acaactcata ccgcattaca tgcatccaac
      841 ccgaatcgtg gtgttaggct tcttgggtgc cattgtcctt ggcacgcttt ttctgatgct
      901 gccgctagcc agcgcaacga acgaatcgac gcccttttta acggcgttct tcacagcggt
      961 gtcagccgta tgtgtaacag ggcttgtggt cgtcgatacc ggcacctact ggagtttttt
     1021 cggtcaagta gtgatcttgt tgctgtttca gcttggtggg tttggcatca tgactgcagc
     1081 caccttgctc ggactgatgg tcaatcgctc gttacgtctt aaaacacgac tgatcgctca
     1141 aacagaaacg cacaccatca gtggcggcga tttaagagcc accttcaaga tcgttttgtt
     1201 cactacactg atcatggaag ccattgcttc ggtgattcta gtaaccattt acttggttcg
     1261 ctacagcgca tcatttgacg tggccctgtg gcacggcata ttccatgcga tatccgcctt
     1321 taacaatgct ggattcgcac tctatgcaga tgggctgacc cgctttagca gtgacttttt
     1381 gtttttgtta ccaatcatga tcgcggttgt ggtcggtggc ttgggttttc cggtgtttct
     1441 ggatttacgt gacaagttac tgcgccgcag atccctatcg ctgcactcca agatcacact
     1501 cacaggtacc gcgtcgttac tggttcttgg gaccgtgttc attctcgctt tcgaatggaa
     1561 caatacaggt acgctggcag ccatgtcttt tcctgacaaa ctactgtctt cggtatttat
     1621 gtcagtatcg gctcgaaccg ctggcttcaa tacagtcgac atagggagcc tggaacaggg
     1681 gacctgggcc atacattacc tgctgatgtt tgttggtggt ggcagcgccg gcacagccgg
     1741 cggcgtgaag gttggtacat tccttatttt gctgctgctc gtgctagctg agatccgtgg
     1801 tcggcgtgat actgagatat tcggtcgtcg cgtgtcgaac tccgtacagc gagaggccat
     1861 caccgtgctt gttttaggca gtgcctgtgt ggtggtggcc acatttatct tgttatctac
     1921 aaccgacttc ccgacagacc aagtcatttt tgaagtgatt tccgcgttcg caactgtcgg
     1981 gctttctact ggcatcactg ccgacctacc ccccatcgct caagtcacat tgaatatctt
     2041 aatggtggtt ggtcgcgtcg gcaccattac tgtggcagcc gcacttgcca ctagctccgt
     2101 agcacaccgc taccgatacc ccgaggagag accaattgtt ggataacttt ctttttacag
     2161 aacggttcgc tttttctgct tcagacagcg tgctcgtcgt tggcttgggt cgcttcggca
     2221 gctccgtagc acaatcactc gtcacactag gccacgaagt catgggcatc gatatcaacg
     2281 aagaacgtgt gcaagattgg tcacaccgcc tgacacacgc catccaagcc gactcgtcaa
     2341 acgttgatat tctgagacaa ctaggtgcag cggacttctc acatgccatt gtgggcattg
     2401 gcgacaacct atcggccagc ctgctcaccg tcatggcgat gactgaactt ggcatcaagg
     2461 atatctgggt caaagcaact aacacggcgc acgggcagat cgccgaacgc attggcgcgc
     2521 atcacgtggt ctacccagaa gccgccatgg gcgagcgcgt tgcccacctg atctcaggca
     2581 agatgattga tttcatcgag tttgatgatg gttttgcgat tgccaaactt caagcaccaa
     2641 ctttgtgcca caacctcaca ttagacgagt cgcgaattcg cgaactacat gacatcacgg
     2701 tggtgggagt caaaagactg aacgaggact ttacttatgc caagccagag acattcatca
     2761 agcccggcga tttattaatc gtctcaggca cgaccgcgtc tattgaaaaa tttgccgcta
     2821 aaaccaatca aaacaaacgc ccgtccaaga aaggctaagc ctggccatcc tcggcgtcgg
     2881 tggagaggtc gcgatggcag tcggcgcaca gactctgatg ggccgg
//
LOCUS       DATBNL010000814         4248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_188126, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000814 DATBNL010000000
VERSION     DATBNL010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4248
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188126"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VIC30_13925"
     CDS             <1..415
                     /locus_tag="VIC30_13925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY7805516.1"
                     /translation="AADNAKFGQPEIKLGIIPGAGGTQRLPRSVGKSKAMDLVLTGRM
                     MNAEEAERSGLVSRVVAAEKLIEEAKDAATVIAAMSLPSVMMAKEAVNRAYESGLREG
                     ILFERRAFHSLFATDDQKEGMKAFVDKRAPVFKHR"
     gene            563..1009
                     /locus_tag="VIC30_13930"
     CDS             563..1009
                     /locus_tag="VIC30_13930"
                     /inference="COORDINATES: protein motif:HMM:NF015834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HEY7805517.1"
                     /translation="MSYMSSTAADQVVLTDEEKARLAQRARRDLLRILLSQLVSALAV
                     SIVFGLVSGAGSALSALLGAFCYLAPNAVFVLRLLLATYKPQGAGAGTFLVGNALKVL
                     VALGLLWLLADLDRGRLDWLAAVIGLIAALKGYWFGLLFTGGKLGK"
     gene            1094..1975
                     /gene="atpB"
                     /locus_tag="VIC30_13935"
     CDS             1094..1975
                     /gene="atpB"
                     /locus_tag="VIC30_13935"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEY7805518.1"
                     /translation="MAAAGDVSPQSYYIQHHLVNNNNIGGPQGTIADFNVINYDSMFW
                     SMLMGLIVLFFMWRGARKATPGVPGRFQAAVELLVDMVEQQARSIVPSEETRKFVSPL
                     ALTIFLWIVLMNALDLVPVDLMPWIWKTTGLGYAPGDPLYYHKILPTADLNVPLGMSL
                     GVLLLMLYYGVKIKSPGGFVKELFTAPFHAHGFAAVILAPANFLLNIVEYAAKSVSLG
                     MRLFGNMFAGELVFMLVALLGGAWTGFNAASLALGVGHILAGTVWALFHILIVVLQGF
                     IFMMLTLVYIGQAHEGH"
     gene            2062..2301
                     /gene="atpE"
                     /locus_tag="VIC30_13940"
     CDS             2062..2301
                     /gene="atpE"
                     /locus_tag="VIC30_13940"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011827793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEY7805519.1"
                     /translation="MTNVAFVALACAFIIGLGAIGACIGIGMMGGKYLEASARQPELM
                     NALQTKMFLLAGLIDAAFLIGVGIAMLFAFANPFV"
     gene            2435..2905
                     /locus_tag="VIC30_13945"
     CDS             2435..2905
                     /locus_tag="VIC30_13945"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEY7805520.1"
                     /translation="MNLNATLFFQMIVFFVLAWVTMKFVWPPITKAIEERRQKIAEGL
                     AAAEQGKTDLAQSQAKISAMEESAKADMHSRLTDAEKHGAQIIDQARKEAEAERARIV
                     EQARQEALQEAQRVRDALREEVATLAVQGASHILKREVDQKAHAELLAQLKTQL"
     gene            2918..3460
                     /locus_tag="VIC30_13950"
     CDS             2918..3460
                     /locus_tag="VIC30_13950"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015064896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEY7805521.1"
                     /translation="MAENSTIARPYAEALFAAAKASAEGLQETADHVQLLAELVELED
                     VRQAVSDPRLDSEQRGKLIRGLVDEKNLNEQLNNFIDLLLENDRLLLLPDISEQFAVL
                     KDEAEGVAQAEIASAYALTEEQVSELVQLLEPKFNKKLKPHVTVDETLIGGVRVVVGD
                     YVLDTSVQAQLNRMRETLMA"
     gene            3490..>4248
                     /locus_tag="VIC30_13955"
     CDS             3490..>4248
                     /locus_tag="VIC30_13955"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931386.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEY7805522.1"
                     /translation="MQLNPSEISELLKSRIEGLGTSSDIRTQGTVVSVSDGICRIHGL
                     SDVMQGEMLEFPNSTFGLALNLERDSVGAVILGDYTNISEGDSVSTTGRILEVPVGRE
                     LLGRVVNALGMPIDGRGPIEAKQTDVIEKVAPGVIARQSVSQPLQTGLKSIDSMVPIG
                     RGQRELIIGDRQTGKTAVAVDAIINQKGKDVKCVYVAIGQKASTINNVVRKLEEHGAL
                     EYTIVVAAAASESAAMQYLSAYSGCTMGEYFRDRG"
BASE COUNT          918 a          954 c         1256 g         1120 t
ORIGIN      
        1 tgcggcggac aatgccaaat tcgggcaacc ggaaatcaag cttggcatca tccccggcgc
       61 aggtggcacg cagcgattgc cgcgctctgt tggcaaatcc aaggccatgg atctggtgct
      121 cactggacgc atgatgaatg cagaagaggc ggagcggtca ggtttggtct cacgcgtcgt
      181 cgctgcagaa aagctaatag aagaagccaa agatgcggct actgtgattg cagcgatgtc
      241 actgccctca gtcatgatgg caaaagaggc agtcaaccgc gcctatgaaa gcggcttgcg
      301 agaaggcatt ctatttgagc gtcgggcgtt tcattcactg tttgcaaccg acgatcagaa
      361 agagggcatg aaagcctttg tggacaagcg cgcgcccgtg ttcaagcatc gatagggggc
      421 tttgcaaatc taggggaaaa cacggtatac tccgttggct ttgcgctagc gacttcgtca
      481 tagcaagcct taatcaaggt gatgtcaggt ctctgaaggg ttgataaagc acaatggcga
      541 tcggtggtag aaggtgacta gtatgagtta catgtcttcg acggccgctg atcaggttgt
      601 tcttactgac gaagaaaaag cacggttagc gcaaagagct cgtcgtgacc tgttgagaat
      661 tttgttgtct cagctcgtgt cggcattagc ggtttcgatc gtgtttggat tggtttcagg
      721 tgcgggttcg gctctcagtg cgttgctagg agctttttgt tatctcgcac cgaatgcggt
      781 ttttgtgttg cgtttgttac tggcaactta taaaccgcag ggtgcaggcg ctggaacgtt
      841 tctggtaggg aacgctttga aagtcttggt ggccttgggt ctactgtggc ttttagcgga
      901 tcttgataga gggcgtctgg attggctggc agcggtgatt ggattaattg ctgccttgaa
      961 aggatattgg ttcggtttgc tgttcacggg tggcaagctg ggcaagtaac tatgggtcga
     1021 agcgtatagt cacgtttcga gtgttgaatc agggcctgaa aatttcaggt ccttgcacaa
     1081 tgtaagggtt cgcatggctg ccgctggtga cgtttccccc cagtcttatt acattcagca
     1141 ccatttggtg aacaacaata atatcggcgg gccgcaaggc accatcgccg attttaatgt
     1201 catcaattac gactcaatgt tctggtccat gttgatgggg ttgattgttc ttttcttcat
     1261 gtggcgcggg gcccgtaaag caacgccggg tgttcctggt cggtttcaag ctgctgtcga
     1321 gctgctcgtt gatatggtcg agcagcaagc acgcagtatt gtgccaagtg aggaaacgcg
     1381 taaatttgta tcgccgctgg ccttgacgat tttcttgtgg atcgtgctga tgaatgcgct
     1441 cgatctggtc cctgtcgact tgatgccgtg gatttggaag acgactggtt tgggctatgc
     1501 gccaggtgat ccgctgtact accataagat tttgcctact gctgacttga acgttccgct
     1561 tggcatgtcg ctcggggtgt tgcttttgat gctgtactac ggtgtcaaaa tcaagagtcc
     1621 cggcggattt gtcaaagagt tgtttacggc gcccttccat gcgcacggtt ttgctgcggt
     1681 gatattggca ccagccaatt ttcttctcaa tatagttgag tacgctgcta agtctgtgtc
     1741 attaggtatg cggctattcg gcaacatgtt tgccggtgaa ttggtattca tgctcgtcgc
     1801 tttgcttggt ggtgcgtgga ctggctttaa tgcggcgagt ctggcgcttg gtgttggtca
     1861 tattttggcc ggtactgtgt gggcactttt ccatatattg attgttgtat tgcaagggtt
     1921 cattttcatg atgctgacgc tggtatacat tggccaagcg catgaggggc actaacaagt
     1981 tggcttggta ttgcctggct ggctttaaag agtagtttgt ttttttaact tttgatttga
     2041 gacattaacc aaggagttgt catgaccaac gtcgctttcg ttgctctcgc ttgcgctttt
     2101 attatcggtc tgggtgctat tggtgcttgc atcggtatcg gcatgatggg tggcaagtat
     2161 cttgaagctt cggctcgtca gcctgagctg atgaacgccc tgcaaaccaa gatgttcttg
     2221 ctggctggtc tgatcgacgc tgcgttcctg atcggtgtcg gtattgcaat gctgtttgca
     2281 tttgcaaacc cgttcgtctg attactggct ttgggtgcac tgctattgac agtgcacacg
     2341 cgctgctcac gtccaatgtt ggtcgtgagt attagtcaaa tcgggcgcct ggccggtatg
     2401 ttgccaggtg ttcaggtgtg atagggaaag aaccgtgaat ctgaatgcga cactcttttt
     2461 tcagatgatc gtatttttcg tgttggcttg ggtcacgatg aagttcgtgt ggccgcccat
     2521 cacgaaggcg atcgaagagc gccgacaaaa aattgccgag ggattggcag ctgctgagca
     2581 agggaaaaca gatcttgctc agagtcaggc caaaatttcg gccatggagg agtcagcgaa
     2641 ggctgacatg cactcccgtt tgacggacgc tgaaaagcac ggcgcgcaga tcattgatca
     2701 agcgcgcaaa gaggctgaag ctgagcgtgc acgtattgtg gagcaggctc gccaagaagc
     2761 attgcaagag gctcagcgtg tacgcgatgc tttgcgtgag gaggtggcga cacttgcggt
     2821 ccagggtgct tcacacatcc tcaagcgtga agtggaccag aaagcccatg cagagctgtt
     2881 ggctcagttg aaaactcaac tgtaaaggat ctagcacatg gctgaaaact ctaccatcgc
     2941 gcgtccctac gctgaggctt tgttcgcggc agctaaggct tctgctgaag gcttgcagga
     3001 aacggctgac catgtgcagt tgttggctga gctcgttgag ctagaggatg tccgtcaggc
     3061 agtctctgat cctagacttg acagcgaaca gcgcggcaag ctgattaggg ggctggtcga
     3121 cgagaaaaac ctcaacgagc agttgaataa cttcattgac ttgcttcttg agaatgaccg
     3181 gctgttgctt ttgcctgata tatccgagca gtttgcggtg ctaaaggacg aggccgaagg
     3241 tgtggcgcag gcggaaatcg ccagtgctta tgccctgacc gaggagcaag tcagcgagct
     3301 cgtgcaactg cttgagccga aatttaataa aaagctaaag ccccatgtga ccgtggacga
     3361 aaccttaatt ggtggtgttc gcgtggtggt gggtgattat gtgctcgaca cgtctgtgca
     3421 ggcgcagctc aatcgcatgc gcgaaacgct gatggcgtaa gccgacgaaa agttatcagg
     3481 agtctgaaca tgcaactcaa tccgtcagag attagtgaac ttctaaagag ccgaatcgag
     3541 ggcctaggca cctcatcgga tattcgtacg caaggtacgg tcgtctcggt cagtgatggc
     3601 atttgtcgca ttcacggtct gtcggacgtc atgcagggcg aaatgttaga gtttccgaac
     3661 agtaccttcg ggctcgcact gaacctcgag cgtgactcgg taggcgcagt gattcttggc
     3721 gactacacca acatttctga aggtgactcc gtcagcacca ccggccgtat tcttgaggtg
     3781 ccggttggtc gtgagctgct tggtcgtgtg gtcaatgcgc tgggtatgcc catcgatggc
     3841 cgtggcccaa tcgaagccaa gcaaaccgat gtgattgaaa aagtcgcacc tggtgtgatt
     3901 gcccgtcaat cggtgtctca accattgcag actggtttaa agtcaatcga ctcgatggtg
     3961 ccgatcggtc gtggtcagcg cgagttgatc attggcgatc gccaaacagg taagacggcg
     4021 gttgccgttg acgcgatcat caaccaaaag ggcaaggacg taaagtgcgt ctacgtcgct
     4081 attggtcaga aggcatcaac gatcaacaac gtcgtgcgta aacttgaaga gcacggtgcg
     4141 ctcgaataca ccattgtggt cgctgctgct gcttctgaga gcgctgccat gcagtatttg
     4201 tccgcatatt ccggttgcac catgggcgaa tacttccgcg atcgcggt
//
LOCUS       DATBNL010000815         3788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_188128, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000815 DATBNL010000000
VERSION     DATBNL010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 3788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3788
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188128"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..1069)
                     /locus_tag="VIC30_13960"
     CDS             complement(92..1069)
                     /locus_tag="VIC30_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY7805523.1"
                     /translation="MTGYILRRLMYGVLILIGVNLLTFVLFFAVNTPDDMARLAIGGQ
                     RVSVDAIDKWKAERGYDKPLWINAEASGGEKFTDTIFYQRSVPLLAFDFGLSDSGRDI
                     GWEIKQRMGPSLALAIPSFVLGILASISFALLLVFFRTTPLDFWGVVLCVLMLSISGL
                     FYIIAGQWLFAKILRLVPYSGYIGGLDMVKFLALPVLVAIISRLGPEARFYRSLFLEE
                     ISKDYVRTARAKGLGERVVLFKHVLRNAMLPILTGTVSALPLLFMGSLIAESFFGIPG
                     LGSYTIDAINAQDFSVVRAMVFLGASLYIVGLILADISYTVADPRVRFE"
     gene            complement(1066..3333)
                     /locus_tag="VIC30_13965"
     CDS             complement(1066..3333)
                     /locus_tag="VIC30_13965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012250290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY7805524.1"
                     /translation="MRAIKWFGLVWLVAAAGLLAGCDWVEQPINSPYEAGAEQDNTLY
                     TAFTQRSPRYLDPARSYSSDETPYTYNIYEPLYGYHYLKRPYELTARAAEAVDTPVLL
                     DKAGNVLADTVDPELVHESVHEIRLKPGILFQPHPAFAKNADGQYTYYPLKPGALADR
                     YAITDFAQTGTRELTAHDYVYAFRRLASPRVASPIYSTLAQHVVGFAEYGEQLKAHET
                     KVREQAGDGELPWLDLREFAFEGVQAVDDHTLRIRVKGSYPQFKYWLSMTFTAPVPWE
                     ADRFYSQPGMATNNLSLNTWPVGTGPFMMVESLQNQRHVLARNPNFRGEPYPCEGEPG
                     DREAGLLEDCGQLTPFVDRMVFNIEKESIPLQGKFMQGYYDLPQANRGDTGVAMLVAA
                     GDSNEKAALYADRGIQLPTTVEASIFYLGFNWLDPVVGGGDTPEQQEKNRKLRQALSI
                     AFNWEEYIAIFQQGQAQPAFGPVPPGILGYQEAPEGINRTVYNVVDGKAKRKSLEQAR
                     ELLAQAGYPNGRDEETGKPLVLYFDSAAGANASNPALDWMRRQVGHLGIQLDIRATDY
                     NRFQEKMSRGVAQMFMWGWIADYPDAENFLFLLYGKQTKADKGGENAANYNNPEYDAL
                     FQKMRDLPDGPEKAAIIDEMIKIVQHDAPWMFGFFPKSAGAYQQWVHNAKPSQMVRNS
                     LQYLRIDSETRTQKIAEWNRPVWWPLLVLAVVLALVIWPAWRMVKLQQQRTALPPNSP
                     PNSPPNLPPTSGDAP"
     gene            complement(3321..>3788)
                     /locus_tag="VIC30_13970"
     CDS             complement(3321..>3788)
                     /locus_tag="VIC30_13970"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEY7805525.1"
                     /translation="LGYELTGKVIRVADGDTITLRGEQDNYRIRLASIDAPETGSGSK
                     RPGQPYGNASRKFLAEQVAGKTLTLDCYETDRYGRHICDIPLGDYTANQLLVFAGMAW
                     ANRQGKDKYLRDRSLLELQQDAQENKRGLWVEPNAVAPWQWRYDCWRKGQCGR"
BASE COUNT          910 a         1113 c          962 g          803 t
ORIGIN      
        1 tctgaacgac tcactcgcca agcgtaaaaa accactgcta ataccatcag gtatagcgca
       61 acatcggtcc acagaaacac gaagttcggc attattcaaa cctcacgcgc ggatcggcca
      121 ctgtgtaaga aatgtccgct aggatcaagc ccacgatgta taacgaggcg cccagaaaca
      181 ccatggctct aaccactgag aagtcctgcg cattaatggc gtcgatggtg tagctgccta
      241 gacccggaat gccaaagaaa gactcggcaa tcaggcttcc catgaataac aagggcaagg
      301 ccgaaaccgt acccgtgaga atcggcagca tggcattgcg cagcacgtgc ttaaacagca
      361 ccacacgctc gcccaagccc tttgctctgg cggttcgcac atagtccttg ctgatttctt
      421 ctaaaaacaa gctgcggtaa aaccgcgctt caggcccgag acgcgagatg atcgccacca
      481 agaccggcag cgccagaaac ttcaccatgt ccaaaccgcc gatgtaacct gaatacggca
      541 ccagacgcaa gattttggcg aacaaccatt gcccagcgat gatgtaaaag agtcccgaga
      601 tagatagcat caacacacac agcaccaccc cccagaagtc cagtggcgtg gttctaaaaa
      661 acaccaacaa caacgcaaat gagatactcg ccagtatccc caacacaaaa ctcggtatcg
      721 caagcgccaa acttggcccc atgcgttgct taatttccca gccaatgtca cgaccactgt
      781 ctgagagtcc aaagtcaaac gcgagcaatg gcactgagcg ttgataaaag atcgtgtcag
      841 tgaacttctc gcctccagaa gcttcggcat tgatccacag cggcttgtca tacccacgct
      901 cggctttcca cttgtcaatg gcgtcaacgc tcacgcgctg cccgccaatg gcaagcctag
      961 ccatgtcatc aggcgtgttg accgcaaaaa acaacacaaa ggtcagtagg ttcacaccaa
     1021 tcagaatcag aacgccatac atgaggcggc gcaaaatata gcccgtcatg gcgcatctcc
     1081 tgaagtgggt ggcaagttcg gtggcgagtt cggtggtgag ttcggtggca aagcggtacg
     1141 ctgctgttgc agcttaacca tgcgccaggc cggccaaatc acaagcgcga gcaccacggc
     1201 taacaccagc aatggccacc aaacagggcg attccattcg gcgatttttt gtgtgcgcgt
     1261 ctcactatca atacgcaaat actgcaggct gttgcgcacc atctgcgaag gcttggcgtt
     1321 atgcacccac tgttgatagg cacccgctga tttagggaag aacccaaaca tccaaggggc
     1381 gtcgtgctgc acgatcttga tcatctcatc aatgatggcg gctttctctg ggccgtcagg
     1441 caggtcccgc attttctgaa acaaagcgtc atattcaggg ttgttgtaat tggcggcgtt
     1501 ctctccgccc ttgtctgcct tggtctgttt accgtataac aaaaacagaa agttctcggc
     1561 atcggggtag tcagcaatcc agccccacat gaacatttgg gccacgccac gagacatctt
     1621 ttcttggaaa cggttgtagt cggtcgcacg aatatcgagc tggatgccta agtgccccac
     1681 ctgacggcgc atccaatcaa gcgccggatt tgaggcattg gcgccggctg ccgaatcaaa
     1741 atacagcacc agtggtttgc ccgtttcctc atcacgcccg ttcgggtagc ccgcttgggc
     1801 aagcagctcg cgggcctgct caagcgactt acgcttggct ttgccgtcga ccacgttata
     1861 gaccgtgcgg ttgatacctt ctggcgcctc ttgataaccc agaatgcctg gcgggaccgg
     1921 accaaatgcc ggttgcgcct gcccttgctg gaaaatcgcg atgtactcct cccagttaaa
     1981 ggcaatgctc agcgcttgac gcaacttgcg gtttttctct tgttgctctg gcgtatcacc
     2041 accacccacc acgggatcga gccagttaaa cccgagataa aaaatcgagg cctcaacggt
     2101 ggtgggcagt tgaatgccgc gatcggcata tagcgctgct ttttcattcg aatcgccagc
     2161 ggccaccaac atggccacgc ctgtgtcacc gcggttggct tgcggcaagt cgtagtagcc
     2221 ctgcatgaac ttgccttgca gcgggatgga ttctttttca atattgaata ccatgcgatc
     2281 aacgaatggc gttaactggc cgcaatcttc taagagccct gcctcacggt cacctggctc
     2341 gccttcgcac gggtacggtt caccacggaa attcgggttg cgtgccaaca catgacgctg
     2401 gttttgcagt gactcaacca tcataaatgg gcccgtacca actggccagg tgtttaacga
     2461 caggttgttg gtcgccatac ccggctggct gtagaagcga tcggcttccc agggcaccgg
     2521 tgcggtaaag gtcatggaca accaatactt gaactgcgga taactgcctt tgacccgaat
     2581 acgcaaggta tggtcatcga cggcttgaac accctcaaac gcaaactcac gcaaatccag
     2641 ccacggcaac tcgccgtcac ccgcctgttc gcgcaccttg gtttcatgcg cctttaactg
     2701 ttcaccatac tcagcgaatc ccaccacatg ctgagccagc gtcgagtaaa tgggcgatgc
     2761 cacccgtggg ctagccaaac gccggaatgc atacacgtag tcatgcgcag tcaattcacg
     2821 ggtcccggtt tgcgcaaagt cggtgatcgc ataccgatcg gcaagcgcac cgggctttag
     2881 cggatagtag gtgtattgac cgtcagcatt tttagcgaat gcgggatgcg gttgaaacaa
     2941 aatacctggc ttcaaacgga tttcgtgcac gctctcatgc accaactcag gatcgaccgt
     3001 gtcggcaagc acattgcccg ccttgtctag cagtacggga gtgtctacag cttcggccgc
     3061 gcgagcggtt agctcatagg gccgctttag gtaatggtag ccatatagcg gctcatagat
     3121 gttgtaggtg tatggcgtct catcactgga ataagaacgc gccgggtcga ggtagcgcgg
     3181 cgagcgttga gtaaacgccg tatacaacgt gttgtcttgt tcagcacctg cctcgtacgg
     3241 gctattgatg ggttgctcaa cccaatcgca acccgcgagc aaacccgccg ctgccacaag
     3301 ccaaaccaga ccgaaccact ttatcgcccg cactggccct tcctccagca gtcatagcgc
     3361 cactgccagg gcgccacggc attgggctcg acccacagac cacgcttgtt ttcttgagcg
     3421 tcttgctgca attccaataa agaccgatcg cgcagatatt tgtccttgcc ctgacgattg
     3481 gcccatgcca tgcccgcaaa tacgagcaac tgattggctg tgtaatcgcc cagcggaata
     3541 tcgcagatgt gacgaccata gcgatcggtc tcgtagcaat ccaaggtcaa tgtcttgcca
     3601 gcaacctgct cggctagaaa cttgcgcgac gcgttgccat acggttggcc cgggcgtttg
     3661 ctgccgctgc ctgtctcagg cgcatcaata ctggccagac gaattcggta gttgtcttgc
     3721 tcgccgcgca acgtaatggt gtcaccgtcg gcgactcgaa taaccttgcc cgtgagctca
     3781 tagcccaa
//
LOCUS       DATBNL010000816         2578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_9662, whole genome
            shotgun sequence.
ACCESSION   DATBNL010000816 DATBNL010000000
VERSION     DATBNL010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9662"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1762)
                     /gene="lptD"
                     /locus_tag="VIC30_13975"
     CDS             complement(<1..1762)
                     /gene="lptD"
                     /locus_tag="VIC30_13975"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEY7805526.1"
                     /translation="MSPALMPNRVSEEEMPIYLGGDEMKGNPEGQLVIEGRGDVRRTD
                     AVLTGNYLRYDDQTSEVDAEGDARLVQDGNVVVGPSMRYNLETDEGEIESPEFWLSNG
                     GTGIGSKAVMSNRNEMTIDDVTYTACPCPDPAWWLTASEVNLNYDDNEGEAWGSVLFF
                     KGLPILASPYLTFPIRKERKSGFLAPTFAITSQSGYDMTLPYYLNLAPNYDATLQLRP
                     MSKRGLQLGGDFRYLGESFNGTFAGTYLEKDRELDRDRWLYSTQHSQRFGSGFYGGWD
                     ISGVSDDDYFKDFSILAVNQATTTFLPRSGWVGWSSEFWRARVEYATFQTLGDITPQY
                     NTVPALTLSGSRYNLGGFDLVMDNSAIWFDRDKDEFGRQLGPNGQRLVSYPTISYPFV
                     RPGYYITPKVGLHMTRYQTDWQPGAPGQSSNNRIVPIMSVDAGMTFERDASYFGHDAI
                     QTLEPRVYYLNVPYRDQSDFPVYDTTLSDFSFSQAFQENIYTGGWDRIANANQLTVAM
                     GSRYLNATTGEERAYLAVGQRLYFADQLVTLPGEVPRTDVESEYLISAAANLTDTLST
                     SLDLQYNPYDNRWDRSQIVAR"
     gene            2011..>2578
                     /locus_tag="VIC30_13980"
     CDS             2011..>2578
                     /locus_tag="VIC30_13980"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEY7805527.1"
                     /translation="MSVPTESADRQTALNIWLQNLPTSLGLQLDTMSPASSDASFRRY
                     WRITSARTNLIVMDAPPPQEDCQPFLDVTHRLAHANVTVPEVLAHDLDQGFMLLSDLG
                     RDNYYAAIASGLDDTVLQAYYRQALDMLVKLQHADSTGLAAFDAPRLRGELELFEQWF
                     VKQHHQTELTLAESTALDAIFEMLCAGMA"
BASE COUNT          632 a          692 c          664 g          590 t
ORIGIN      
        1 aacgtgccac gatctgggag cgatcccaac gattgtcata ggggttgtat tgcagatcga
       61 gactggtact gagcgtatcg gtcaggttcg ccgctgcact aatgagatac tcggactcga
      121 catcggtacg tggaacctca ccaggcaagg tcacgagctg atcggcaaaa tataagcgct
      181 gtcccacggc aaggtaagcg cgctcctcac cggttgttgc attcagataa cgtgacccca
      241 ttgccacagt cagttgattg gcattggcga tacgatccca cccaccggtg tagatgttct
      301 cctgaaaggc ctgagagaaa ctgaaatccg agagtgtcgt gtcgtacaca gggaaatctg
      361 actggtcacg gtatggaaca ttcaaataat aaacacgggg ctcaagtgtc tgtatggcat
      421 catgcccaaa atatgaggca tcacgctcga aggtcatgcc cgcatccacc gacatgattg
      481 gcacgatacg gttgtttgat gactgtccgg gtgcaccggg ttgccaatca gtttggtaac
      541 gcgtcatatg taacccgact ttaggggtga tgtagtagcc tggccgcaca aaaggatagg
      601 agatagttgg ataagacacc agacgttgac cgttggggcc aagctgacga ccgaactcat
      661 ctttgtcgcg gtcaaaccat atggcactgt tgtccatgac aaggtcaaaa ccaccgaggt
      721 tgtaacgact accacttaac gttaaagcgg gtactgtatt gtattggggt gtgatgtcac
      781 caagcgtctg aaacgtcgca tattcgactc gcgcccgcca gaactcgctc gaccacccaa
      841 cccaaccaga gcgcggcagg aatgttgtgg tggcctgatt gaccgccaga atcgagaagt
      901 ctttgaagta atcgtcatca gatacgccgc tgatgtccca gccgccataa aaacctgagc
      961 cgaaccgttg tgaatgttgg gttgagtaga gccaacgatc acggtctagt tcacgatctt
     1021 tttctaagta agtacctgca aatgtgccgt taaacgactc tcccaagtat ctgaagtcgc
     1081 ccccaagttg caacccacgt ttactcatgg gccgcaattg cagcgtcgca tcataattgg
     1141 gtgccaggtt caggtagtag ggcaacgtca tgtcgtagcc tgattggctg gtaatggcga
     1201 atgttggtgc taggaaacct gacttgcgct ctttgcgaat cggaaacgtc agatagggcg
     1261 aggctagtat cggtaggcct ttaaaaaaca acacgctgcc ccaagcctca ccctcgttgt
     1321 catcgtagtt caggttgact tcgctggccg ttagccacca tgctggatcc ggacaggggc
     1381 aggcggtgta tgtcacatcg tcaatggtca tttcattgcg attgctcatg acggctttgc
     1441 tgccgatacc cgtgccgcca ttgcttaacc agaactctgg cgactctatc tctccctcat
     1501 cggtctcgag gttgtagcgc atggaaggac ccaccacgac gttgccgtct tgtaccaagc
     1561 gcgcatcgcc ctcggcatcg acctcactgg tctggtcgtc atatcgaaga taattgccag
     1621 tcaacacggc atcggtgcgc ctgacgtcac cgcgaccttc aatcaccaat tgcccttctg
     1681 gattgccttt catctcatcg ccaccaaggt agatgggcat ttcctcctca gagactcgat
     1741 tgggcatcag ggccggcgac acctttagac ccctgaggat caatgatcca tcgacaggct
     1801 cttggtgtga ctgtcccgta gcaacggtta caacgaccga gcctaagacc agcaaaggca
     1861 gtgcaagagc aacaggttta aaggaaagcg acaccgagac agcacaccat taaaagttcc
     1921 accaggcgct gtgacagacc tgtcacgtgc gacagacacg attaacccgg tattataagg
     1981 attcattaaa ccgacacgat agcatctgac atgtccgttc cgacagaaag cgccgatcgc
     2041 cagacagccc tgaatatttg gctacaaaac ctgccgacgt cgctcggtct acagctcgac
     2101 acgatgagcc cggcttcaag cgacgcgagt ttcaggcgat attggcgtat cactagtgcc
     2161 cgaacgaact tgattgtgat ggacgcaccg cccccccaag aggactgcca gccattttta
     2221 gatgtcacac accgattggc gcacgccaat gtcactgtac ctgaagtact tgctcacgac
     2281 cttgatcagg gttttatgct cttaagtgac ctcggacgag acaattacta cgccgccatt
     2341 gcgtcaggcc ttgacgatac cgttttacag gcttactacc ggcaggcgct tgatatgcta
     2401 gttaagttgc aacatgccga cagcacggga cttgcggcct ttgatgcacc acggctgcgt
     2461 ggcgaacttg agctttttga gcagtggttt gtaaaacagc atcatcagac cgaattaaca
     2521 ttagccgagt ctacagccct tgatgcgatt tttgagatgc tatgcgccgg tatggctg
//
LOCUS       DATBNL010000817         4551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_49204, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000817 DATBNL010000000
VERSION     DATBNL010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 4551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4551
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49204"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1492)
                     /locus_tag="VIC30_13985"
     CDS             complement(<1..1492)
                     /locus_tag="VIC30_13985"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017773946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY7805528.1"
                     /translation="MSVKLEPSDHIAHWINGQTFQEAGARTQDVFNPATGEAVRQVEL
                     GSVEAVKKAIDAAKAAFAGWANTPPIRRARVMNNYLNLLNIHKDQLAAVLTQEHGKVF
                     SDAQGEVTRGIDIVEFACGIPQLLKGDYTDQVSTDIDNWTMRQPLGVVAGITPFNFPC
                     MVPMWMFPMAIACGNTFVLKPSERDPSVTLLMAQLLKEAGLPDGVFNVVNGGKLAVDT
                     LLEDPDVRALSFVGSTPIAQYIYQTGASHGKRVQALGGAKNHMVVMPDANIDAAVDGL
                     IGAAYGSAGERCMAISVAVLVGDVADKIVPRLEERAKQLKITNGMESDAEMGPLITQA
                     AKDRVEGYIAAGVEQGATLVVDGRGVTVPGHEKGFFVGGTLFDHVTPEMSIYTDEIFG
                     PVLVCVRVATLEQAVKLINDHEYGNGVSCYTSDGHVAREFARGIQVGMVGINVPIPVP
                     MAWHGFGGWKRSLFGDMHAYGEEGVRFYTKQKSIMQRWPETIAAGAE"
     gene            complement(1670..1909)
                     /locus_tag="VIC30_13990"
     CDS             complement(1670..1909)
                     /locus_tag="VIC30_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805529.1"
                     /translation="MTSLKRAMFVVPVVAAFAIGGCANMTTGQQRELSGGAIGAGAGA
                     AVTAIAGGNPIWGAIGGAAVGTLGGFLYNKNEQGQ"
     gene            complement(1950..2309)
                     /locus_tag="VIC30_13995"
     CDS             complement(1950..2309)
                     /locus_tag="VIC30_13995"
                     /inference="COORDINATES: protein motif:HMM:NF037472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rap1a/Tai family immunity protein"
                     /protein_id="HEY7805530.1"
                     /translation="MKKLLLASGASLFTMIGGLGAAHAAPVSTSEMVTVCSDTGNKTA
                     QNFCNGYAQGVYDMYVSDIHPTKNPAYVCFPKPGPTRADVIKGYVAWATTATEYAKLP
                     AADTMMRYLATTYPCNS"
     gene            complement(2513..2821)
                     /locus_tag="VIC30_14000"
     CDS             complement(2513..2821)
                     /locus_tag="VIC30_14000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014192518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-potential iron-sulfur protein"
                     /protein_id="HEY7805531.1"
                     /translation="MKSTRRQFMAVSAVSVASLVTSKVAFAQPMLEESAPQAVALGYV
                     EDAANVDTAKFAKYQKGQVCSNCQLYTAKDDKVGACSIFPGKLVAGPGWCNLWVKKAG
                     "
     gene            3079..3948
                     /locus_tag="VIC30_14005"
     CDS             3079..3948
                     /locus_tag="VIC30_14005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012358020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY7805532.1"
                     /translation="MPTLPIVWVGPVFVLIWSTGFIVAKYGMPYTDPMTFLTLRFAGV
                     LVVMVPLAAWWRVQWPARAAAGHIAVAGMLMHVGYLGGVWTAIKLGMPAGISALIVGL
                     QPVLTAFLAARVAERVSTRQWLGLVFGFSGVAIVLSDKLGFEGVTLWGVVLCFIALIS
                     FTAGTLYQKRFCPMFDLRAGTMIQYAASMVVTGALMLLFEPMQVIWSAEMIGALVWSV
                     LFLSIGAMSLWFVLLRQGAATRVSSLIYLTPPTVAVMAWILFDEALSFWVALGTLVTV
                     IVVWLVTRTRSSA"
     gene            4006..4293
                     /locus_tag="VIC30_14010"
     CDS             4006..4293
                     /locus_tag="VIC30_14010"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY7805533.1"
                     /translation="MAAYIIAMVNVHDTEKYKRYMALASQACQEHGGTYLARGGDKEI
                     VEGSFPGDRVVILSFESIEKAREFYHGATYQAGKQERAGAADFNMMIVDGV"
     gene            complement(4323..>4551)
                     /locus_tag="VIC30_14015"
     CDS             complement(4323..>4551)
                     /locus_tag="VIC30_14015"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY7805534.1"
                     /translation="TFSFCYVVWYRLSRRLPPVVSSLSIMMAPVIGVISSALTMGERV
                     TALDWLALALILVAMSVVLLPAHLLGFKRRT"
BASE COUNT          991 a         1125 c         1298 g         1137 t
ORIGIN      
        1 attcagcacc cgcagcaatg gtttctggcc agcgttgcat gatggatttt tgtttggtgt
       61 agaaacgcac accttcttca ccgtaggcat gcatgtcacc aaataggctg cgcttccagc
      121 caccaaaccc gtgccaggcc ataggaaccg gaatcggtac gttgatacca accatgccaa
      181 cctggatgcc acgtgcaaat tcgcgtgcga cgtggccatc gctggtatag cacgacacgc
      241 cgttaccata ttcgtgatcg ttgataagct tgaccgcttg ctcaagggtg gccactcgga
      301 cacacacgag cactggcccg aagatttcat cggtataaat cgacatttct ggggtgacgt
      361 gatcaaacaa cgtgccaccg acaaagaacc ctttctcgtg acccggcacc gtgacaccac
      421 ggccatcgac taccagtgtg gcgccttgtt ccacgccagc ggcgatatag ccttcgacgc
      481 ggtccttggc ggcttgtgtg atgagcgggc ccatttcggc gtcagattcc atgccgttgg
      541 tgattttgag ttgcttggcg cgttcttcta agcgtgggac gattttgtcg gccacatcac
      601 cgacgagcac ggccacagaa attgccatgc aacgttcacc ggccgagccg taggccgcac
      661 cgatcaagcc gtcaacggca gcatcgatgt tggcgtcagg catgactacc atgtggttct
      721 tggcgccacc gagcgcttga acgcgcttgc cgtgtgaggc accggtttga tagatgtatt
      781 gcgcaatcgg cgtggaacct acaaagctca aagcacgtac atcgggatct tcgagcaggg
      841 tgtcaacggc gagcttgcct ccattgacaa cgttaaagac accatcaggc aagccagctt
      901 cttttaacaa ctgcgccatc aaaagcgtga ccgatgggtc gcgttcgctg ggtttgagca
      961 caaaggtgtt gccgcaagca atggccatgg ggaacatcca catcggcacc atgcaaggga
     1021 agttaaaggg tgtgatacct gcaaccacgc ccagcggttg gcgcatggtc cagttgtcga
     1081 tatcggtgga cacctgatcg gtgtagtcgc ctttaagcaa ttgtgggatg ccgcaagcaa
     1141 attccacaat atcaatgccg cgggtgactt caccttgcgc atcagaaaac accttgccgt
     1201 gctcttgggt gagcacagca gctagctgat ctttgtgaat gttcagcaga ttcaggtagt
     1261 tgttcatcac ccgtgcgcgg cgaatcggcg gggtgttggc ccaaccggca aatgccgctt
     1321 tagccgcatc aatggctttc ttaacggcct cgaccgagcc aagttcgacc tggcgcacag
     1381 cctcaccggt cgcagggttg aacacgtctt gcgttcgagc acccgcttct tgaaacgttt
     1441 gtccattaat ccagtgcgcg atatggtcgc tgggttctaa cttgactgac atgcatgtct
     1501 ccttggtcgt tactgactac taaccgttta actcaccata atattgctta ttgctgctgt
     1561 atgccagcgc agcattgggt gacctacctt catgccacta agaaaaaagc ctcacaggct
     1621 gatgctgtga ggctttttag aggccggtgg cctcaaaggg gcgcgtggtt tactggcctt
     1681 gctcgttctt gttgtacaag aaaccgccaa gcgtaccaac agccgcacca ccaatggcac
     1741 cccaaatcgg gttgccgccg gcaatggctg taactgccgc acctgcaccg gcaccgatcg
     1801 cgccgccgga cagctcacgc tgctgacccg tggtcatgtt ggcacaacca ccaatggcaa
     1861 atgccgcaac caccggcacc acaaacatag ctcttttcaa tgaagtcatg gttatctctt
     1921 ccttatctgg ttcgtccgaa tggccgcact tagctgttgc aaggatacgt ggtggcaagg
     1981 tagcgcatca tcgtgtcagc tgcgggcaat ttggcatatt cggttgccgt ggtcgcccag
     2041 gctacataac ccttgatgac atcggcgcgt gtgggaccgg gtttggggaa gcacacgtaa
     2101 gcggggttct tggtggggtg aatgtcagag acatacatgt cgtagacacc ttgtgcataa
     2161 ccattgcaga agttctgcgc ggttttatta cctgtatcgc tgcacaccgt gaccatttcg
     2221 gacgtgctaa cgggggcggc atgtgctgct ccaaggccac cgatcatggt gaacagggat
     2281 gcgccagagg ctagaagtaa ctttttcatg ggcagtctcc agttaatagg tgatttgatt
     2341 ctagcggcaa aagtcgtaac tgagacgttt ttttggggtg ctgaaggttt ttgaaggttt
     2401 cagaaggttt tttgaagggg atgattaggg cataccctca aatgtacaaa agccgctcgt
     2461 ctgagcggct tttgtataaa gcatggccaa caaagagctt ggccggcttt tattagcctg
     2521 cttttttgac ccagaggtta caccagcccg ggccagccac aagcttgccg gggaagatgc
     2581 tacaggcgcc taccttgtca tctttggcgg tgtagagctg gcagttgctg cagacctgac
     2641 ctttttgata cttggcgaat tttgctgtgt ctacgttggc tgcatcttca acgtaaccca
     2701 aggccacggc ctgaggtgcg ctttcttcga gcatgggttg cgcgaaagcg actttggagg
     2761 tgacgagtga tgccacgcta acggctgaga cggccataaa ctgacgacgg gtagatttca
     2821 ttttgctttc ctcatgtgaa gcgacaaact attggggcaa agaacaattc aataaacgac
     2881 gtgttgggtg agattgtagg cgttttcagt taagcaagtc gtaaattgag tcgatatata
     2941 accataaatt tttgacattg atcaataaaa attcccgctt gtacgatgag tgagaatcgc
     3001 tttcaatacg aacatacaaa aacaacgatt aaatggattg aattgggccg caaatgatgc
     3061 ccaatctggg aacagtaggt gccaacactt ccgattgttt gggtaggacc tgtctttgtg
     3121 ctcatctgga gtaccggttt tatcgtggcc aaatatggca tgccgtatac cgatccgatg
     3181 acgtttttga ctttacgttt tgctggcgtg ttggtggtga tggtgccgtt ggcggcctgg
     3241 tggcgcgtgc agtggcccgc acgcgcggca gctggccata ttgccgtggc gggcatgcta
     3301 atgcacgtag ggtatctcgg cggtgtttgg accgccatca agcttggtat gccggcaggt
     3361 attagtgcct tgattgtggg gttgcaaccg gtgctgacgg cgtttctagc tgcgcgcgtg
     3421 gctgagcggg tgagcacccg tcaatggtta ggattggtgt ttggctttag tggcgtggcc
     3481 attgtgctgt ctgacaagct tggttttgaa ggtgtgacgc tgtggggtgt ggtgttgtgc
     3541 tttatcgcgc tgatttcttt tacggcgggc accctctatc agaaacgctt ttgtccgatg
     3601 tttgatttgc gtgcaggcac gatgattcag tatgccgcaa gcatggtggt gactggcgcc
     3661 ttgatgctgt tgtttgaacc gatgcaggtc atctggagcg ccgagatgat tggcgcgctg
     3721 gtttggagtg tgctgttttt atcaattggt gcgatgagcc tgtggtttgt gctgctgcgt
     3781 caaggtgcag ccacccgggt cagtagtttg atttacctca cgccaccaac agtggctgtg
     3841 atggcgtgga tcttgtttga cgaggcactg agtttttggg tggccttggg cacgttggtc
     3901 accgtcattg tcgtgtggtt ggtcactcgc acgcggtcta gtgcttgacg tacagttctg
     3961 tgcgtacagt ctttattcgg atttgaattt tttgaggaga taaaaatggc agcctacatc
     4021 atcgcgatgg ttaacgtgca cgacactgag aaatacaagc gctatatggc gttggctagc
     4081 caagcttgcc aagagcatgg tggcacttat ttggccagag gtggcgacaa agagattgtt
     4141 gaaggtagtt tccccggtga tcgggtagtg atcctgtcgt ttgagtcaat tgagaaagcg
     4201 cgtgagttct accatggcgc gacctaccaa gcaggcaagc aagaacgtgc tggcgcagcg
     4261 gatttcaaca tgatgatcgt cgatggtgtt taagtgtcaa gggcggcgct taagtacggc
     4321 gtttaagtac ggcgcttaaa gcccaacagg tgagctggta acagcaccac gctcatggct
     4381 accaagatca atgccaaggc cagccagtct agtgctgtga cccgctcacc catggtgagc
     4441 gcgctgctga tgacgccgat gaccggtgcc atcatgatcg acaggctgct gaccaccggg
     4501 ggcaggcgtc gcgacagtcg ataccaaacc acgtaacaaa aagaaaatgt c
//
LOCUS       DATBNL010000818         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_49386, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000818 DATBNL010000000
VERSION     DATBNL010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49386"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VIC30_14020"
     CDS             complement(<1..673)
                     /locus_tag="VIC30_14020"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY7805535.1"
                     /translation="MNDATPDQHLELGDMPLELGGCIPCARLAYVTLGRLNPAGDNAI
                     MILHGYTSSHRFVLPNDPDNAEGSWGPLIGPGKVIDTDRYFVVSPNALGSSYGSSGPG
                     DINPATGKIWGPDFPALTFADQVRAQSRLLDALDVSKLYAVIGLSMGGFGAFQWAVQQ
                     PEHVAKIIPVLTAPWGSLNETASHQSVTTVLEANAAWHGGWYHDNLPQIQQTLVEIRH
                     KTLARY"
     gene            complement(811..978)
                     /locus_tag="VIC30_14025"
     CDS             complement(811..978)
                     /locus_tag="VIC30_14025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013518757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805536.1"
                     /translation="MKTNSPMKWLFWIVLVLFLSWDWLDSPAIDLRNEPPAIALGSGQ
                     APVGGHCAVAQ"
     gene            complement(990..2063)
                     /locus_tag="VIC30_14030"
     CDS             complement(990..2063)
                     /locus_tag="VIC30_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011804921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HEY7805537.1"
                     /translation="MKRLPLAGLMLAFFLLLLLAVSVRQALLFTIGIGMGAALAGARF
                     GFTTGWRALIEDRDPRGVTGQIALLALAAILAMPLLANYTELTAALGPPSVSLILGAF
                     VFGLTMQIADGCGSGTLYKAGLGIPLNMGILPLFAAGSFLGSVHIGDWLSLGQTEPVG
                     LVNTLGLEKALAVTLLGLLAVLIAVRLWVGKDKAWLDSKWLWGALALAVLATLNLIVA
                     GQPWGVVYGFGLWAAKIAQSAHLFDPSGNFFWAQDGNAQILAQSVLLDVTSITNIGIL
                     AGALWVSAQASGNATPLTRQQWIIGLGAGFLMGYSSRLAFGCNIGAMLSGVSTGSLHG
                     WIWIPLAFAGTWFGVRVRRRYGF"
     gene            complement(2083..>2606)
                     /locus_tag="VIC30_14035"
     CDS             complement(2083..>2606)
                     /locus_tag="VIC30_14035"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY7805538.1"
                     /translation="GLPLSTTAPSIVKSDFEPSLDETLLVSQAQLSQDAESSNAVLVD
                     ARPASFFNGDTRHAAAKTPGTLPGAVNVAHSVWFKPGTSEVIDATQAKSVAAKYNLAN
                     SNKEIVSFCNTGHWAATNWFVLSELVGDPDVKLYAGSMVDWTRASNALPMDNVPGRIK
                     QLWIDAQLWFASL"
BASE COUNT          635 a          731 c          702 g          538 t
ORIGIN      
        1 aatagcgtgc cagtgtcttg tggcgaatct caactaaggt ttgctggatt tgtggcaagt
       61 tgtcgtggta ccaaccaccg tgccaggcgg cattggcctc taaaacggtg gtgacgcttt
      121 gatggctggc tgtttcattc aaagaccccc agggcgcggt aagcaccggg atgattttgg
      181 caacgtgttc aggctgttgt acagcccact ggaatgcacc gaagccgccc atggacaagc
      241 cgatcacggc atatagcttg cttacgtcta aggcatctag caaacggctt tgtgcacgga
      301 cttggtcggc aaatgtcagc gccgggaaat cgggtcccca aattttgccg gttgccggat
      361 tgatgtcacc tggaccactg ctgccatagc tcgatcccaa ggcgttgggt gaaaccacaa
      421 aatatcgatc ggtatcaatg accttgcctg gaccaattaa aggcccccag ctgccctcgg
      481 cgttgtcggg gtcgttgggc agaacaaacc ggtgactaga tgtatagcca tgcaagatca
      541 tgatggcgtt atcgcccgct gggttcagcc tgcccagcgt gacatatgcc aagcgggcgc
      601 acggtatgca tcccccaagc tcaaggggca tatcaccgag ttcgaggtgt tgatcgggtg
      661 tggcgtcatt catccatcag actctaacga aaaaaaccac cttggtggac gttgtgtttg
      721 ggttgtagtg gttcagcaca acggtccagc agaaacgtca ggcatgaacg tcagactttg
      781 gccagctgac aaatctactc tgctactgcg ctattgcgcc actgcgcaat gaccgccaac
      841 gggcgcttgg cctgacccta gcgcaatggc aggaggttcg tttctcaagt caatggctgg
      901 ggagtctagc caatcccaag acaagaataa aaccagcacg atccagaaca gccatttcat
      961 aggtgagttt gttttcatgt gagttggcct taaaaaccgt agcgccggcg cacacgcacg
     1021 ccaaaccagg tgccggcaaa tgctagaggg atccagatcc aaccgtgcag gctgccggtg
     1081 gaaacgccgc ttagcatcgc accgatgttg cagccaaatg ccagccttga gctatagccc
     1141 attaagaatc cagcgcccaa gccaattatc cattgttgac gtgtcagtgg cgtggcgttg
     1201 cctgaagcct gggccgacac ccacaatgcg ccagccagaa tgccgatatt ggtaatagaa
     1261 gtaacgtcta acaagacgct ttgcgccaga atttgcgcat tgccgtcttg cgcccaaaag
     1321 aaattgcccg atgggtcaaa cagatgggca gactgcgcaa tcttggcggc ccacaatcca
     1381 aagccgtaga ccacgcccca aggctgtcct gccacgatca ggttcaaggt ggcaagtacc
     1441 gccaacgcca aggcgcccca tagccattta gagtctaacc aagctttgtc tttgccaacc
     1501 cacaagcgca ccgcgatcag cacagccaac aatcccaaca gggtaactgc cagtgctttt
     1561 tctaggccta gcgtattgac caaacccacc ggttcggttt gaccgagcga aagccagtca
     1621 ccaatatgca ccgagcctaa gaaactgcct gcggcaaaca gcggcaagat acccatgttt
     1681 agtggaatgc ccaagcccgc tttgtatagc gtgcccgagc cgcaaccatc ggcaatttgc
     1741 atggttaagc caaacacaaa tgcacctagt atcaagctaa cacttggtgg ccctaaagcc
     1801 gcggtcaact ccgtgtagtt ggccaacaac ggcatggcca ggatggcggc aagcgccaat
     1861 agcgcaattt gccccgtcac accacgcggg tctcggtctt cgatgagtgc tcgccagcca
     1921 gtggtgaatc caaagcgcgc gcccgctaag gccgcaccca tgccaatgcc gatcgtaaat
     1981 aagagcgctt gacgcaccga caccgctaag agcaacaata aaaagaaggc gagcatcaag
     2041 cccgccaaag gcaatcgttt catggttgtg ccgcaggtcc gattaaagtg aggcgaacca
     2101 taattgggca tcaatccaaa gctgcttgat gcgacccggg acgttgtcca tgggcagtgc
     2161 gtttgaggcg cgcgtccaat ccaccatgga gccggcgtag agcttcacat ccggatcacc
     2221 gaccagctca gacaacacaa accagttggt cgcggcccaa tggccggtat tgcaaaacga
     2281 cacgatttct ttgttgctat ttgccaggtt gtatttggcg gcaacagact tggcttgtgt
     2341 cgcgtcaatg acttcgctgg tgccgggttt gaaccacacc gagtgcgcca cgttcacagc
     2401 acccggtaag gtacccgggg tttttgcggc ggcgtgacgc gtgtcaccgt taaaaaacga
     2461 tgcagggcgg gcatcgacta aaactgcatt agaagattcg gcgtcttgac tgagttgtgc
     2521 ttggctcaca agcaatgtct cgtccaagct aggctcaaag tcgctcttga cgatgctcgg
     2581 cgcggttgtc gatagcggca gtccta
//
LOCUS       DATBNL010000819         2399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_188767, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000819 DATBNL010000000
VERSION     DATBNL010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188767"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="VIC30_14040"
     CDS             <1..202
                     /locus_tag="VIC30_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805539.1"
                     /translation="QVDRQNDKAQVQPVATVAVSLPGLLRLHDQVGKVVDELVNQGVL
                     TRKTPEALPTAEASAAETDKKA"
     gene            437..1447
                     /locus_tag="VIC30_14045"
     CDS             437..1447
                     /locus_tag="VIC30_14045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805540.1"
                     /translation="MTTAQPDSAAQALHEDLFETQISLQTRLLDYIEQADEFHVLDEA
                     WEEFTNYDQREMDPEDPEPVLHFFPWALFYWRRDVPETELEAARDELLDEDTDIDALD
                     DEVEDNDQNWPDDLDDEAIDKVLSEVLGDGPDGKISGEGDVELDDDEFDDGLDDDENY
                     IALPPIAVMFMNSVDGADGPESRALEQTLTPRDRAFIEAAATAPYSFFKVLAVGPGAF
                     VTLEDLMVPNEVAVYAPALVDTSEVDDIIYAQVVSLENANLLCGVAPAVLPVVVEEPL
                     AEARDRIEELVQKLGDDWRYELEFELRALYQQMVDSLQQQIDEDGEDSLDGDASTPPT
                     KH"
     gene            complement(1444..1797)
                     /locus_tag="VIC30_14050"
     CDS             complement(1444..1797)
                     /locus_tag="VIC30_14050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011902412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HEY7805541.1"
                     /translation="MGWLIFKYATTALLVVIISEVAKRSDRLGSFVAALPLVTILTLF
                     WLYFEKQSDEKITLHAFYTFWYVIPTLPMFLAFPWLHGKFGFWGAIGASVAITVVTFG
                     LVVLVARLFDVDLLG"
     gene            complement(2014..>2399)
                     /locus_tag="VIC30_14055"
     CDS             complement(2014..>2399)
                     /locus_tag="VIC30_14055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015913332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transmembrane anchor protein"
                     /protein_id="HEY7805542.1"
                     /translation="KVTAPAPTPAPAPAANPTAEAPSGKSDEVSFVLKPGQGAEIKLV
                     MKAGAKAKFSWTANGAVVNFDAHGDGGGRSIMYEKGRGVPGDEGVLEAAFDGNHGWFW
                     RNRTNSDVTVTLKTNGDYIELKRLV"
BASE COUNT          568 a          636 c          652 g          543 t
ORIGIN      
        1 ccaggttgac cgtcaaaacg acaaggcaca ggtccaaccc gtggccactg tggccgtatc
       61 gttgcctggt ttgctgcgcc tgcatgacca agtgggcaaa gtagtggatg aactggtcaa
      121 ccaaggtgtg ctcactcgca agacgccaga ggccttaccc acggccgaag ccagtgcggc
      181 tgaaactgac aagaaggctt gagcctctag cagggggcgc aagcccccct gtttaataaa
      241 atcgtttttc tctctctctt ttcgtttccg ttctaacatg tctgccgctc tcggcgtcta
      301 gcctgcacgg agacacttca tatcttctca agcaccgcac ccaaataccg catccagata
      361 ccgtaccccc ttgcaacgtc acacaggtct gcgacaatgg ttaaaccttt tagccaattt
      421 gccacggacg tgccccatga ccacagctca gcccgactct gccgcccaag cgttacacga
      481 agatttgttt gaaacacaga tcagcttaca gacgcgtttg cttgactaca tagagcaagc
      541 cgacgaattc catgtgctcg atgaggcttg ggaggagttc accaactacg atcagcgtga
      601 aatggatccg gaagatccgg aacctgtgct gcactttttt ccgtgggcgc tcttttactg
      661 gcgccgggac gttccagaaa ctgagttaga ggccgcgcgt gatgagttgc tcgatgagga
      721 taccgacata gatgcgttag acgatgaagt tgaggataac gatcaaaact ggccggacga
      781 tcttgatgat gaggcgatcg ataaggtgct ctctgaagtg cttggcgacg gtcctgatgg
      841 caagattagc ggcgaaggtg atgtcgagct tgatgacgat gagtttgatg atgggttgga
      901 tgatgatgag aattacattg cattgccacc gattgcggtg atgttcatga actcggttga
      961 tggtgccgat ggccctgaga gccgtgcgct cgagcaaaca ctcacgccgc gtgatcgtgc
     1021 ctttatcgaa gcagcggcta ctgcacccta cagttttttt aaggtactgg cggtagggcc
     1081 tggtgccttt gtgacactgg aagacttaat ggtgcccaat gaggtcgcag tctatgcacc
     1141 ggcactggtc gacacatcag aagttgacga tattatctat gcgcaagtcg tgagcctgga
     1201 gaatgcaaat ctgctgtgtg gcgtggcgcc cgccgtgctg ccggtggtgg tagaggaacc
     1261 tttggctgag gcgcgtgacc gcatagaaga actggtacaa aaacttggtg acgactggcg
     1321 ttatgagttg gagtttgagc tgcgggcgct ctatcagcaa atggtcgata gcctgcagca
     1381 acaaattgat gaggacggtg aagacagctt agacggtgat gcatcaacac caccgaccaa
     1441 gcactaacct aatagatcaa cgtcaaataa ccgggcaacc agtacaacga gcccaaacgt
     1501 caccacggta atggcaactg aggcgccaat ggcgccccag aagccaaact tgccgtgtag
     1561 ccatggaaac gccagaaaca tcggtagggt gggaatgaca taccagaacg tatagaacgc
     1621 gtgcagcgtg atcttctcat cggactgttt ctcaaagtac aaccaaaaca gcgtcaggat
     1681 cgtgaccagg ggcaaggccg cgacaaagct gccaagccga tcgctgcgtt tggcgacttc
     1741 cgagatgatg accacaagca gtgctgtggt ggcgtattta aaaatcaacc agcccattgc
     1801 gttctctcaa tcgaattctc tagcaatctc actagcgact tcactagcag tttcaccatt
     1861 ggtttggact cagcacagac agtcctctgc gctggcggat ggctcgtgcg tccaactcga
     1921 gcgccgaatt gtcttacgcg actatagtcg cttcagatga caagggtgcc aacggcgccc
     1981 tcgtcaacac ctagcgctga aatcgtccaa cgattagact agccgcttga gttcaatgta
     2041 gtcaccattg gtttttaagg tgacggtgac atcggagttg gtgcggttgc gccagaacca
     2101 gccgtggttg ccatcaaacg ctgcctcaag tacaccctca tcaccaggta cgccacgacc
     2161 tttttcatac atgatcgagc ggccaccgcc gtcgccgtgc gcatcaaaat ttaccaccgc
     2221 gccattcgct gtccagctga atttggcttt ggcaccggcc ttcatgacca atttgatttc
     2281 cgccccctga ccaggtttga gcacaaaact cacttcatcg cttttgccag atggcgcctc
     2341 ggcggttggg ttggctgctg gtgctggtgc tggtgtaggc gcaggtgcgg tgactttgc
//
LOCUS       DATBNL010000820         7014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_188922, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000820 DATBNL010000000
VERSION     DATBNL010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 7014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7014
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188922"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..673
                     /locus_tag="VIC30_14060"
     CDS             128..673
                     /locus_tag="VIC30_14060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008253009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEY7805543.1"
                     /translation="MPELHLLGICGSLRQASANRGLLRAAQAVLPDNVTMDIAELGDV
                     PFYNSDLDTKPESVKRLLAQIESAQGLVLASPEYNYSIAPALKNALDWASREPDNRLL
                     SGKTVAIVGAGGGMGTSRSQYHLRQVCVCLNLHVLNKPEFFANAFGGNFDEGGDLLNE
                     DLREQLTAQMAALVDWTRRLS"
     gene            complement(706..1620)
                     /locus_tag="VIC30_14065"
     CDS             complement(706..1620)
                     /locus_tag="VIC30_14065"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEY7805544.1"
                     /translation="MLNPRVLRAARAAAYLLVSASLLWLVWRWFDGANALARLKAANG
                     YWLLVALGLLTIQLIASALRWRLTSHQLGLPLKTITAVSQYYISMLCNLTLPGGVVGD
                     AGRAWHNRTQAGLAASAAAVVLDRLAGQIAMITTLAVGLAWQLRATATSHTGWWLATL
                     ALLLGLVVVARWVPKPAWLARLITWMKAAWFAPDVWRRQLGLTLLILACSLLAFYACA
                     QAVGAELPTHSALLVLPATLLVMILPVSVAGWGLREAAAAVIWPIAGVASDVAVAASV
                     AYGIVATLSALPALWWLRPRLKPADGSI"
     gene            complement(1670..2422)
                     /locus_tag="VIC30_14070"
     CDS             complement(1670..2422)
                     /locus_tag="VIC30_14070"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY7805545.1"
                     /translation="MPTLKLYLSKYRQVGLGQLATIEALVLWSALLLLSLMALPEAID
                     IWQQAGAALSLTLLVALGALVLVFLRRHYPYRHFGWCNTVTLMRATAVCWLAGLWFAT
                     NANWQGTIAWGASIAGLVLLTLDGLDGWLARKRGNSSSFGARFDMEVDSLLALVLAVL
                     VWQTGKVGAWVVLLGLFRPAFILASQRWTKLQADLPPAWPRKVVCVVQVAALATMLAP
                     VVTPVVATGLAALALALLVWSFGRDTWWLLHQ"
     gene            complement(2524..3486)
                     /locus_tag="VIC30_14075"
     CDS             complement(2524..3486)
                     /locus_tag="VIC30_14075"
                     /inference="COORDINATES: protein motif:HMM:TIGR03168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HEY7805546.1"
                     /translation="MPADILTVTLNPTLDVSTSVDRLVNHAKLRCSNEQEQVGGGGIN
                     VAQGIHSLGGHCQAMLPTGGTRGQEIVTRLEDSGLSLVTTVIDQQNRECFNVFESSTG
                     HEYRFVLPGPTLSNAEQNACITAVLAALPTQFLVLSGSLPPGVPEDFYAQLILAVRAK
                     TPHLPVVLDASGQALRHALDAGVFLFKPSGEELGALIGQTPITTHDCVASCRALVQQG
                     KAQIVALTLGAQGSIIVTDTHAWQVKPLPVPVTSTVGAGDSFVGGLVWSLIQSRDLEQ
                     AARVATACSAAALQTQGALQFDKPNVLSISQSVQVDPLSLPAAQ"
     gene            3615..4388
                     /locus_tag="VIC30_14080"
     CDS             3615..4388
                     /locus_tag="VIC30_14080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019447188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY7805547.1"
                     /translation="MTFRPSQAVENRSLVRGLEILRAFRPGLGCLTNSEIAERTGLPR
                     STVSRLTGTLVRCGYLLHDAGMGGYRLSATMVGLAHVMRSGSFVLNESWSLMQTTGRQ
                     MRVNVGLALADHDDMVYLENLPFGPKASLRKIVVGQRVPMALTALGRAYLSTLDEVAL
                     GETFALLKKRHARDWHVLEPQIRAAIVVAQVQGYCAVGWQPGVASVATPLVFGHEPVH
                     VLNMSLYTDDSLAHVTEVLAPGLLRLRDSIVARLTEASA"
     gene            complement(4460..4954)
                     /locus_tag="VIC30_14085"
     CDS             complement(4460..4954)
                     /locus_tag="VIC30_14085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012247891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805548.1"
                     /translation="MFTSAELNTLGKTADALTAYMGTAILAEVGETDGAQWVIFARAL
                     AQDEAPGDDIVHVQMGGPGTHVLGQGGGLETDKVVYDCAFLWAIEITDDEHERFVRLD
                     PEGEVFDAAPELAMLLPFNVEEPELPPDIEDQSDDPNLKTDSDNSTGLDDLDDLDPSE
                     ATRH"
     gene            5088..6761
                     /gene="ettA"
                     /locus_tag="VIC30_14090"
     CDS             5088..6761
                     /gene="ettA"
                     /locus_tag="VIC30_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005015211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEY7805549.1"
                     /translation="MAQYVFTMNRVGKIVPPKKQILRDISLSFFPGAKIGVLGLNGAG
                     KSTLLKIMAGIDKEIEGEAIPMPNLDIGYLPQEPQLNPEHTVRESVEEGLGAVTAARK
                     RLDEVYAAYAEPDADFDALAAEQAELEAVIAAAASSGSDDIEAQMEIAADALRLPPWE
                     AKIGNLSGGEKRRVALCRLLLAKPDMLLLDEPTNHLDAESVDWLEMFLQKFPGTVVAV
                     THDRYFLDNAAQWILELDRGHGIPWKGNYSSWLEQKDDRLKQEEASESARQRTIRKEL
                     EWVRQNPKGRQAKAKARMSRFEELSSHDYQKRNETSEIFIPVAERLGNEVIEFKNVSK
                     AFGDRLLIDDLSFKVPAGAIVGIIGPNGAGKSTLFRMIAGQETPDSGEVVLGQTVQLA
                     FVDQSRDALPNDKSVFESVSDGADILTVGKFEMPARAYLGRFNFKGTDQSKQVGQLSG
                     GERGRLHLAKTLLEGGNVLMLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILAFEGDSQVVFFDGNYQEYEADKKRRLGEAGAAPKRIRYKALK"
     gene            6790..>7014
                     /locus_tag="VIC30_14095"
     CDS             6790..>7014
                     /locus_tag="VIC30_14095"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEY7805550.1"
                     /translation="MIRRLSAAHSVLLIVDMQASLMPAIDQQHTRIDAAMRLAKAAKL
                     LGIPVLATEHLAYKLGHTVEPLKSDLESVCL"
BASE COUNT         1626 a         1875 c         2006 g         1507 t
ORIGIN      
        1 taaacgcgcc tatcccctta taaagccaag ggatattcac gcaaaacgca aagggtgatt
       61 gagccgcgct atgttgcagt gcacttaaga tccctccaac agtatctgaa caaattaagg
      121 ggaagtcatg ccagaactgc atttattggg catttgcggt agtttgcgcc aggcgtctgc
      181 taaccggggt ttgttacgcg ctgcacaagc cgtgttacca gacaacgtga ccatggacat
      241 cgcagagctt ggcgatgtgc ctttctataa cagcgatctc gacaccaaac ccgagtcggt
      301 taaacgattg cttgcacaaa tcgagtcagc gcaaggattg gttctggcaa gtcccgagta
      361 caactactca atcgcaccgg cgttaaagaa cgcattggat tgggcctcac gcgagccaga
      421 caatcggttg ctttctggta agacggtagc gatcgtcggt gccggtggtg gcatgggtac
      481 atcacggtcg caataccact tgcgtcaagt ctgtgtgtgc ctgaatctgc atgtgctcaa
      541 caaaccagag ttttttgcca atgcctttgg cggcaatttt gatgaaggcg gcgatctgct
      601 caatgaggat ttgcgtgagc aattgactgc gcaaatggcc gcactggttg attggacgcg
      661 tcgtttgtcc taagtagttg tctaaagcag cggttgtcca aaccgctaga ttgatccgtc
      721 ggcaggttta agccgtggtc gtaaccacca aagcgctggc agtgccgata aggtggccac
      781 gatgccatag gcgacactgg cagccacggc cacatcactg gcaacgcctg cgataggcca
      841 aatcactgct gcggctgcct cgcgcaaccc ccagccggcg accgataccg gcaggatcat
      901 gaccagtaat gtggccggca gcaccagcaa agcggagtgg gtgggcaatt cagcacccac
      961 ggcttgggca caggcataaa acgccaagag actgcaggcc agaatgagta aggtcagccc
     1021 gagttgtcta cgccacacat ctggcgcaaa ccaagctgct ttcatccagg tgatcaggcg
     1081 cgctagccat gccggtttgg gcacccatct tgccacaaca accaagccaa gtagcagcgc
     1141 aagggtagct agccaccacc cagtgtgtga ggtcgcggtt gcacgtaact gccaagccag
     1201 gccaacagcc agtgttgtga tcatggcgat ttgacccgcc aaacggtcaa gcaccacggc
     1261 cgctgcagac gctgccagac cagcctgcgt gcggttatgc caggcgcgac cggcgtcacc
     1321 aacgacacca ccaggcaacg tcaaattaca cagcatcgat atatagtatt ggctaaccgc
     1381 tgtgatggtt ttaagtggca agccgagttg gtgggatgtt aagcgccagc gcaatgctga
     1441 ggcgatcagt tggatcgtga gtaaaccgag cgctactaac agccagtaac cgttggccgc
     1501 tttcagtctg gctagcgcat tggcgccatc aaaccagcgc cacaccaacc acagtagcga
     1561 ggccgatacc aacaaatacg cagccgcacg cgcggcacgt aaaacacgag gatttagcat
     1621 gcacagcctg tatcaaggct ctgtttaagt aataacgcga gcaagccatt cattgatgta
     1681 acagccacca cgtgtcgcgg ccaaacgacc acaccaatag tgccaacgcc agtgcggcta
     1741 acccggtggc cactactggc gtgaccactg gcgccagcat cgtggccaga gccgctactt
     1801 gtacgacaca gaccactttg cgtggccagg caggcggtaa atcagcttga agtttcgtcc
     1861 aacgctggct cgcaagaata aaagccggac gaaacagccc cagaagcacc acccatgccc
     1921 cgaccttgcc ggtttgccag accagtactg ccagtaccaa tgccagcagc gaatcgactt
     1981 ccatgtcaaa gcgcgcccca aaactcgagc tgttgccgcg cttgcgggca agccagccgt
     2041 ctaagccgtc taacgtgagc aacaccagac cagcaatcga agcaccccag gcgatggtgc
     2101 cttgccagtt ggcgttggtg gcaaaccaca agccggccaa ccaacaaacc gccgttgcac
     2161 gcatgagggt caccgtgttg caccacccga aatgtcggta ggggtagtgg cgccgtaaaa
     2221 acaccagcac cagcgcaccg agcgcaacca acaacgttag cgacagcgca gcaccggctt
     2281 gctgccagat gtcaatggcc tcgggcaatg ccatgagact gagcaacaaa agcgccgacc
     2341 aaagcacgag tgcttcaatg gtcgcgagct ggccgagacc gacttgacga tatttgctta
     2401 ggtatagctt aagtgttggc atggttcaca gtccgtctca gaagctaggc gcaagcggat
     2461 ggcttcacaa cacgctttga ggatacgctc agtatagaag cagtgagaca gttttgtgaa
     2521 tgttcattga gccgctggca gggataatgg atcaacttgg acagactgac taattgatag
     2581 tacgtttggt ttatcaaact gcaaagcgcc ttgggtttgc aacgcggcgg ccgagcacgc
     2641 cgttgcaacc cgcgcggctt gttcaagatc acggctttgt atcagcgacc agaccagtcc
     2701 ccccacaaaa ctgtcgccag cacccacggt gctcgtaaca ggcaccggca gcggtttgac
     2761 ttgccaggca tgcgtgtcgg tcacaatgat cgagccttgg gcacccagtg ttaaagcaac
     2821 gatctgggct ttgccttgtt gtactaacgc gcggcagctt gcgacgcagt cgtgggttgt
     2881 gatgggtgtt tgaccgatca gtgcccccaa ttcttcacca ctgggcttaa acagaaaaac
     2941 ccctgcgtcc aaggcatgac gcagggcttg gccgctggca tctagcacca ctggtaagtg
     3001 gggtgttttg gcacgcacag caagtatcag ttgagcatag aagtcctccg gcacaccagg
     3061 tggcaggctg cctgagagaa ccagaaactg ggtgggtaag gccgctagga cagcggttat
     3121 acacgcgttt tgctccgcat ttgataacgt gggccctggc agtacaaagc ggtactcatg
     3181 gccagtgctt gattcgaaga cgttaaagca ctcgcggttt tgttgatcaa tgaccgtcgt
     3241 gaccagtgac agtccactgt cttctaagcg tgtcacgatt tcttggccac gcgtgccacc
     3301 ggtgggcagc atggcctggc aatgcccgcc aagtgagtgg atcccctgag ccacattgat
     3361 gccacccccg ccgacttgct cttgttcatt cgagcaacgc agcttggcgt gattaaccag
     3421 tcggtctacc gaggtactga cgtctagtgt cgggttcagg gtcacggtca agatgtcagc
     3481 aggcataggg cagggtggta ggaatcagga agcaggaatc aggtgttgta tgggattgat
     3541 gatagcggct tgtaaccaga gatggaacta tgatggcggt ttgatcaaag tttgatgtat
     3601 ttggagaccg cgcggtgacc ttccgtccga gccaggcagt ggagaaccga tcgctcgtta
     3661 gagggcttga gattttgcgg gcgtttcgcc ccggtctggg ttgcctgacg aacagtgaga
     3721 ttgctgagcg cacaggattg ccacgctcaa cagtcagtcg cttgactggc accttggtgc
     3781 gttgcggtta cttgttgcac gatgccggta tgggtggcta tcgcctgagc gccacaatgg
     3841 tgggtttagc gcacgtgatg cgcagcggct cgttcgttct gaacgagtca tggtcgttaa
     3901 tgcaaaccac gggtcgccag atgcgcgtca atgtggggtt ggcgttggct gatcatgacg
     3961 acatggttta tctagagaat ctaccgtttg gcccgaaagc ctcattgcgc aaaatcgtgg
     4021 tgggccaacg cgtgcccatg gcattaaccg cgttgggacg cgcctacctc agtaccttgg
     4081 acgaggtggc gctgggcgaa acttttgcgt tactaaaaaa acgccacgcg cgcgattggc
     4141 atgtgctcga accccagatt cgggctgcga tcgttgtcgc tcaagtccag ggttactgtg
     4201 cagtgggttg gcagccgggc gtggcgtcag tggccacgcc gttggtgttt ggccatgagc
     4261 cggtgcacgt gttgaacatg agtctgtaca ccgacgatag tctggcgcat gtcactgagg
     4321 tgctagcgcc cggtctactt cgcttgcgtg actcgattgt ggcgcgtttg accgaggcca
     4381 gtgcttgacg gacggtaacg tgaatgcttg gtgaagtgaa tcagtgaagt gaatcactgc
     4441 agtgcatcac tgaagtgcat caatgccgag tggcttcaga cgggtcaagg tcgtcgagat
     4501 cgtcaagtcc ggtgctgttg tccgagtcag tctttaagtt cggatcatcg ctttggtcct
     4561 cgatgtctgg cggcagctca ggttcttcaa cattaaatgg caacagcatg gccaactctg
     4621 gtgccgcatc aaacacctcg ccttcagggt ctaggcgcac aaagcgctcg tgctcgtcat
     4681 cggtgatttc gatggcccat aaaaatgcgc agtcatagac cactttgtcg gtctctaagc
     4741 cgccaccctg gccaagtacg tgagtgccgg gcccacccat ctgcacatgc acgatgtcgt
     4801 caccgggcgc ttcgtcttgt gccagcgcgc gcgcgaagat cacccattgc gcgccgtcgg
     4861 tttcgccgac ttccgccaaa atcgccgtgc ccatgtaggc tgtgagcgca tcggccgttt
     4921 taccgagggt attgagttct gcagacgtga acatgagagc cgagtcaggg gtggtcatga
     4981 tgtgagtaaa gccagtgttg gtgttttgat gttggtgttt tgaccattgc gggcagtgat
     5041 tgcacctaca atgatggatt accgacattg caacacaaat ttaaccaatg gctcaatacg
     5101 tcttcaccat gaatcgggtc ggcaagatcg tgccccccaa gaaacaaatc ctgcgtgaca
     5161 tttcattgtc attttttccg ggcgccaaaa tcggcgtgct tggcttaaac ggcgctggca
     5221 aatcgacact gcttaaaatc atggctggca tcgataagga aatcgaaggc gaagccatac
     5281 cgatgcccaa tctcgatatc ggttacttgc cacaagagcc gcaactaaac cccgagcaca
     5341 ccgtgcgcga atcggttgaa gagggcttgg gagcggtgac agcggcacgt aagcgcttag
     5401 acgaggtcta tgccgcgtac gctgaaccgg atgcggactt tgatgcgcta gcggccgagc
     5461 aggccgagct tgaagcggtg attgccgcgg ctgcctcgtc aggttcagac gatatcgaag
     5521 cacagatgga aatcgccgct gacgccttgc gcctgccacc gtgggaagcc aagatcggca
     5581 atctctccgg cggtgaaaag cgtcgcgtgg cgctgtgccg tttgttgtta gctaaacccg
     5641 acatgctatt gctcgatgag cccaccaacc accttgatgc tgagagtgtg gattggctag
     5701 agatgttctt gcagaaattc cctggcacgg tggtggccgt gacccacgat cgttatttct
     5761 tagacaacgc cgcgcagtgg attctcgaac ttgaccgcgg ccacggcatt ccatggaaag
     5821 gcaactacag ctcatggcta gaacaaaaag atgatcgctt aaaacaagaa gaggccagcg
     5881 aatcagcacg ccagcggacc attcgcaaag aacttgagtg ggtacgacaa aaccccaaag
     5941 gtcgccaagc caaggccaag gcacgtatgt cgcgctttga agagctgtcc tcacacgact
     6001 atcaaaagcg caacgagacc tctgagatct tcattccggt ggccgagcgt cttggcaacg
     6061 aggtaattga attcaaaaac gtctccaagg cctttggcga tcggttgttg attgatgact
     6121 taagctttaa ggtgcctgct ggtgcgattg ttggcatcat tggtcctaac ggcgcgggta
     6181 agtcaacgct gtttcgtatg atcgccgggc aagagacgcc cgacagcggt gaagtggtgc
     6241 ttggccagac cgtgcaattg gcgtttgttg atcagtcacg cgatgcctta cctaatgaca
     6301 agtcggtgtt tgagtcagtc tcagacggcg cagacattct gaccgtgggc aagtttgaaa
     6361 tgcctgcgcg ggcatacttg ggccgcttta acttcaaggg caccgatcaa agtaaacagg
     6421 tcggacagct ctctggtggt gagcgtggcc gcttacatct ggccaagaca ctgctcgaag
     6481 gcggcaatgt gttgatgctt gacgaaccat ccaacgatct ggacgttgaa accttgcgtg
     6541 cacttgaaga tgcattgctg gagtttgccg gcagtgtgat ggtgatcagc catgatcgct
     6601 ggtttttgga tcgcattgcc acgcacattc tggcctttga gggtgattcg caggtggtgt
     6661 tctttgacgg taactaccaa gagtacgaag ccgacaagaa gcgccgctta ggtgaagcgg
     6721 gtgctgcacc caagcgcatt cggtacaaag cattgaagta gggaagttaa atctaaactg
     6781 gagatcgtca tgattcgacg cctgtcagct gcacactcgg ttttattgat tgtggatatg
     6841 caggcttcgc tcatgccggc catcgaccaa caacacaccc gcattgacgc tgccatgcgt
     6901 ctggccaaag cagccaagct gcttggcatc ccggtgctgg ccacagaaca ccttgcgtac
     6961 aaacttggtc atacggttga gccgcttaaa agcgatctcg agtcggtttg cctt
//
LOCUS       DATBNL010000821         2403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_188944, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000821 DATBNL010000000
VERSION     DATBNL010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188944"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /gene="sucC"
                     /locus_tag="VIC30_14100"
     CDS             <1..681
                     /gene="sucC"
                     /locus_tag="VIC30_14100"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013232694.1"
                     /note="catalyzes the interconversion of succinyl-CoA and
                     succinate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit beta"
                     /protein_id="HEY7805551.1"
                     /translation="EELALGIGVPQASVPKAAGEFQKLYKAYWETDASLAEINPLILT
                     GSGDIIALDAKFNFDSNALFRHPEIVEFRDLAEEDPAEIEASKHDLAYIQLDGNIGCL
                     VNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTEAFKIMLANDDVKAILVNIFG
                     GIMRCDVIAEGVIAACKAVNLNVPLVVRMKGTNEELGKKMLAESGLPIISADTMAEAA
                     TKVVEAVK"
     gene            763..1644
                     /gene="sucD"
                     /locus_tag="VIC30_14105"
     CDS             763..1644
                     /gene="sucD"
                     /locus_tag="VIC30_14105"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006218345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEY7805552.1"
                     /translation="MSILINKDTKVITQGITGKTGQFHTRMCREYANGQAAFVAGVNP
                     KRAGEDFEGIPIYANVADAKKATGASVSVIYVPPAGAAAAILEAVDAELDLVICITEG
                     IPVRDMLEVKNKMAAKNSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSG
                     TLTYEAVAQVTELGLGQSSAVGIGGDPINGLKHIDILQMFNDDPETDAVIMIGEIGGP
                     DEVNAARWAKDNMTKPVVGFIAGVTAPAGKRMGHAGALISGGEDTADAKLEIMEACGI
                     KTTRNPSEMGQLLKSVL"
     gene            1995..>2403
                     /locus_tag="VIC30_14110"
     CDS             1995..>2403
                     /locus_tag="VIC30_14110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY7805553.1"
                     /translation="MLTDNEIADLLAAPKLVINPRARFKEQRGSLQLNYTAQRCGETE
                     FEIFVRQSLHDPQGFSCGLVYTPRLGERTTLMRCNGGNHLHVNSLEGFESIGKCCHIH
                     IATERYMAAGRKPDNYAEPTQLYGEVRGALRTLI"
BASE COUNT          589 a          576 c          673 g          565 t
ORIGIN      
        1 gaggaactgg ctttgggtat tggtgtgcca caggcttctg tgcccaaggc ggctggcgag
       61 tttcaaaagc tctacaaagc ctactgggaa accgatgcgt cactggctga aatcaacccg
      121 ctgattttga cgggttctgg cgacatcatt gcgttggacg ccaagttcaa cttcgatagc
      181 aacgccttgt tccgtcatcc tgagatcgtt gagttccgtg atttggctga agaagatccc
      241 gctgaaatcg aagccagcaa gcatgacctg gcttacatcc agctcgatgg caacatcggc
      301 tgcttagtca acggcgcggg tctggccatg gccaccatgg acacgatcaa actctttggt
      361 ggtgagccag ccaacttcct cgatgtcggt ggtggtgcga cggccgagaa agtcaccgaa
      421 gccttcaaga tcatgttggc caacgatgat gtcaaagcca ttctggtgaa catcttcggt
      481 ggcatcatgc gttgcgatgt gatcgccgaa ggcgtgattg ctgcgtgtaa ggctgtgaac
      541 ctgaacgtgc cgttagtcgt gcgcatgaag ggcaccaacg aagagcttgg caagaaaatg
      601 ctggctgagt cgggcttacc catcatcagt gcggacacca tggctgaagc ggccaccaaa
      661 gtggttgagg cggttaagta actaacccaa caaaccagcg aaagcaaacc acttagaaaa
      721 gaaccagcga aaggttatca aagggttatc aaaggattcc atatgtcgat tctgattaac
      781 aaagacacca aagtcattac acaaggcatc accggcaaga ccggtcagtt tcacacccgt
      841 atgtgccgtg agtacgccaa tgggcaggcc gcattcgttg caggcgtgaa ccccaagcgt
      901 gccggcgaag acttcgaagg cattccaatc tatgccaacg tggctgatgc caagaaagcc
      961 acgggcgctt ctgtttcagt gatttatgtg ccaccagccg gtgccgcagc agccattctc
     1021 gaagcggttg atgctgaact tgatctggtc atttgcatca ctgagggcat tcccgtgcgt
     1081 gacatgctcg aagtcaaaaa caagatggcg gccaagaaca gtaaaactct gcttttgggc
     1141 cccaactgcc cgggcttgat cacacctgac gagatcaaga tcggcatcat gcctggccac
     1201 attcaccgta agggccgtat cggcatcgtg agccgctcag gtaccttgac ctacgaagcg
     1261 gtggcgcaag tcacggaact cggtctgggt caatcaagtg ccgtgggcat tggtggtgat
     1321 cccatcaatg gtttgaagca catcgacatc ctgcagatgt ttaacgatga tcccgagacc
     1381 gatgcggtca ttatgattgg tgagatcggt ggtcccgatg aagtcaacgc cgctcgctgg
     1441 gccaaggaca acatgacaaa gcctgtggtt ggctttatcg cgggtgtcac tgcgccggct
     1501 ggcaagcgca tgggtcacgc cggtgcactg atttctggtg gtgaagacac ggcagatgcc
     1561 aagcttgaga tcatggaagc ctgcggcatc aagaccacgc gcaacccgtc tgagatgggt
     1621 cagttgctga agtcggtgtt gtaaatcggt attgtcgatt ggtgttgtaa agcaagccac
     1681 acgtcaccaa cgctagaagt taatgcaaaa cccaagggcc tgtgtggtga cacacaggcc
     1741 cttgggtttt gttgggcagt tagccggttg gtcggctaaa cgtgatggtt tgtttggtca
     1801 cttgcttggt cacttgtgcg cagctgtcat cagtaaaagc ccggcctcag aaatcaatcc
     1861 tttgtcaata gtttgccagc tacatgggca aaaacacaac aggtcatcat ttgcttcaaa
     1921 agattgcttt gcaagcggct gttcgccatc attgttgatt gtttttgatc aatggggtat
     1981 cgcaggtgga gttcgtgtta actgataacg agatagctga tcttttggca gcaccaaaat
     2041 tagtgatcaa tccaagggcg agattcaagg agcaacgagg ttctttgcaa ttgaattata
     2101 ctgcacagag atgcggggag actgagtttg agatttttgt tcggcaaagc ttacatgacc
     2161 cgcaaggttt ctcttgtgga ctcgtttata cgcctcgttt aggtgaacgg actacgttga
     2221 tgcgatgtaa tggtggcaat catctgcacg tcaatagtct ggagggtttt gaatcgattg
     2281 gaaaatgttg ccacatacac atcgccaccg aacgatacat ggccgcagga cgtaagcctg
     2341 ataattacgc ggagccgacg cagctttatg gggaagtgcg aggcgcgttg cgcactttga
     2401 ttg
//
LOCUS       DATBNL010000822         1597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Orrella sp. isolate SMAG_U4023 k141_188981, whole
            genome shotgun sequence.
ACCESSION   DATBNL010000822 DATBNL010000000
VERSION     DATBNL010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37958924
            Sequence Read Archive: SRR1164896
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Orrella sp. (soil metagenome)
  ORGANISM  Orrella sp.
            Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
            Alcaligenaceae; Orrella.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 10:06:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,798
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 26
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 22 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Orrella sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188981"
                     /isolate="SMAG_U4023"
                     /isolation_source="soil"
                     /db_xref="taxon:1921583"
                     /environmental_sample
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..925)
                     /gene="kdsA"
                     /locus_tag="VIC30_14115"
     CDS             complement(77..925)
                     /gene="kdsA"
                     /locus_tag="VIC30_14115"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016835050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY7805554.1"
                     /translation="MKLAGFDVGLDKPFFLISGPCVIESRQMAMETASALKEITDKLG
                     VPFIYKSSFDKANRSSASSFRGLGMAEGLQILADVRETLQVPILTDVHDIAQVKPVAE
                     VVDVLQTPAFLCRQTDFIQACAASGKPVNIKKRQFLAPEDMLQVVRKAELAAQEAGVT
                     PQIMVCERGASFGYHNLVSDMRSLAIMRQTGCPVVFDATHSVQLPGGQGTSSGGQREF
                     VPVLARAAVAVGVAGLFMESHPDPAKALSDGPNAVPLEKMEALLATLVQLDRVTKSST
                     YLENDF"
     gene            complement(922..>1597)
                     /locus_tag="VIC30_14120"
     CDS             complement(922..>1597)
                     /locus_tag="VIC30_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003813705.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEY7805555.1"
                     /translation="VTVTYIDSEDIEAQGSQMLAEFDAILVPGGFGKRGTEGKIAAIR
                     YARENQVPYLGICLGMQLAVVEFARDVAGLGGANSTEFDPAAPHPVVALITEWMDREG
                     KVEVRTTSSDLGGTMRKGSQRCPVKPNTLAHRIYGDEVNERHRHRYEVNNVYVPRLEE
                     AGLVISARTPTESLPEIMELPNHPWFMGVQFHPEFTSTPRDGHPLFIGFIRAALAHQV
                     KRKEQA"
BASE COUNT          381 a          468 c          409 g          339 t
ORIGIN      
        1 cgtcgttaag tgggcagtct tggtccttgt gtgttgggct cacaccgatg cggtgcttgc
       61 ccctgataca catgccctaa aagtcatttt ctagataagt cgaagatttg gtcactcgat
      121 ccaactgcac caatgtagca agcaatgcct ccatcttctc gagcggcacc gcattaggac
      181 catcagacaa cgctttggct ggatcggggt gactctccat aaagagccct gccaccccaa
      241 cagcaacagc agcacgggcc agtaccggca cgaactcacg ctgcccaccc gaactcgtgc
      301 cttgcccacc aggcaactga accgagtgag tggcatcaaa caccaccggg caaccggtct
      361 gacgcatgat cgcaagcgag cgcatgtcag aaaccaagtt gtgataacca aatgaagcac
      421 cgcgctcaca aaccatgatt tgcggcgtaa cacctgcctc ttgggcagcg agttcagctt
      481 tgcgaaccac ctgcagcatg tcttcggggg ccagaaactg acgtttcttg atgttaactg
      541 gcttaccact cgcggcgcac gcttgaataa agtcggtttg gcggcacaga aatgctggtg
      601 tctgcaaaac atcgaccacc tcggccacgg gtttgacctg tgcaatgtca tgcacatcgg
      661 tcaagatcgg cacctgcaag gtttcgcgaa catcagctag gatttgtaag ccttcggcca
      721 ttccaagacc acgaaaggaa ctcgccgaac tgcggttggc cttgtcaaac gagctcttgt
      781 aaataaacgg cacacccaac ttgtcagtga tttccttgag cgctgaggcc gtttccatgg
      841 ccatttgacg cgattcgatc acgcacggac ctgaaatcaa gaaaaacggt ttgtccagac
      901 ccacgtcaaa tccggcgagc ttcatgcctg ctccttgcgt ttgacctgat gcgccaaggc
      961 tgcacgaatg aacccaataa acaatgggtg gccgtcacga ggcgtcgagg tgaactcggg
     1021 atggaactga acacccatga accacgggtg attaggcagc tccatgatct caggcaggct
     1081 ctcagttggc gtgcgagcac tgatgacaag ccctgcctct tctaagcgag gcacgtaaac
     1141 gttattgacc tcgtagcggt gacgatggcg ttcattgacc tcatcgccat aaatccggtg
     1201 tgccagcgta ttgggtttaa ccggacaacg ctgcgaacct ttacgcatgg tgccccctaa
     1261 gtccgacgat gtcgtacgca cctcgacctt gccttcgcga tccatccact cggtgatgag
     1321 cgccaccaca gggtgcggtg ctgccggatc aaactcggta ctgttggcac caccaagacc
     1381 ggcaacatca cgcgcgaact cgacgacggc tagttgcatg ccaaggcaaa tgccgagata
     1441 tggcacttgg ttttctcggg catagcgaat cgcggcgatc ttaccttcgg tgccgcgctt
     1501 accaaaaccg cctggcacca aaatcgcatc gaactcagct agcatttgcg agccttgtgc
     1561 ctcgatgtcc tcggaatcaa tgtaagttac ggtgact
//
